RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLCN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000114859

Ensembl transcript IDs: ENST00000265593.9, ENST00000344937.11, ENST00000430397.5, ENST00000434054.6, ENST00000457512.1, ENST00000465231.1, ENST00000475279.2, ENST00000485667.1, ENST00000491162.1, ENST00000636180.1, ENST00000636241.1, ENST00000636492.1, ENST00000636658.1, ENST00000636661.1, ENST00000636830.1, ENST00000636860.1, ENST00000637392.1, ENST00000637538.1, ENST00000637909.1, ENST00000638134.1

Found 1527 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCCCCAGGCAGCCCACAGCGCCACCCAGGAGAAGTCTACCTCGCTaGTCAGGTGGGCGTAACCCTCCCAGCCACCCCGTAACCCTCCTA +
Preference number: 1 (lower is better)
Translates to: GPRQPTAPPRRSLPR*SGGRNPPSHPVTLL
Trigger: TAGGAGGGTTACGGGGTGGCTGGGAGGGTTACGCCCACCTGATCAGCGAGGTAGACTTCTCCTGGGTGGCGCTGTGGGCTGCCTGGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638134.1
3UTR CCA 90 bp ACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGGCTCATTaGCATTTGTCGTCGCTGTCGGAAGGGCTGCCCTCCCGGGGGAGG +
Preference number: 1 (lower is better)
Translates to: TGMASTILGHPRGAH*HLSSLSEGLPSRGR
Trigger: CCTCCCCCGGGAGGGCAGCCCTTCCGACAGCGACGACAAATGCCAATGAGCCCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR CCA 90 bp GCCCCCAGAGTGCATGCACCTCAGTGGTCTCCGTGTCACTGCTGCTaGTGGCACTGTCTCGGAAGCTGGCGAGGGGCGGCCGGACTTTCA +
Preference number: 1 (lower is better)
Translates to: APRVHAPQWSPCHCC*WHCLGSWRGAAGLS
Trigger: TGAAAGTCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTGCCACCAGCAGCAGTGACACGGAGACCACTGAGGTGCATGCACTCTGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR CCA 90 bp GGAGGCCATGACGGGAGTGGGGCCCCCAGAGTGCATGCACCTCAGTaGTCTCCGTGTCACTGCTGCTGGTGGCACTGTCTCGGAAGCTGG +
Preference number: 1 (lower is better)
Translates to: GGHDGSGAPRVHAPQ*SPCHCCWWHCLGSW
Trigger: CCAGCTTCCGAGACAGTGCCACCAGCAGCAGTGACACGGAGACCACTGAGGTGCATGCACTCTGGGGGCCCCACTCCCGTCATGGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR CCA 90 bp GGCTCAGCTGGGCCCCCAACAATGCCACCACCTGTGAACGCTCGATaGAGCCCAGCAGAATCATGGACTTGGTGGCGGCCCCAGCCGAGC +
Preference number: 1 (lower is better)
Translates to: GSAGPPTMPPPVNAR*SPAESWTWWRPQPS
Trigger: GCTCGGCTGGGGCCGCCACCAAGTCCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGCTGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636180.1
3UTR CCA 90 bp CAGAACTGCAGGCAGGGGGTGGTTCAAAGGCGAAGAGGCTCCACCTaGCCCCAGGCAGCCCACAGCGCCACCCAGGAGAAGTCTACCTCG +
Preference number: 1 (lower is better)
Translates to: QNCRQGVVQRRRGST*PQAAHSATQEKSTS
Trigger: CGAGGTAGACTTCTCCTGGGTGGCGCTGTGGGCTGCCTGGGGCCAGGTGGAGCCTCTTCGCCTTTGAACCACCCCCTGCCTGCAGTTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638134.1
3UTR GCA 90 bp GACTCAGGGGACTCCACTAGGGCCAGCATTCGGCCCTTGGTCCTGTaGAGTGCCAAACGCAGGTCCCGGAAGGTGCAGCTGAGGGCCACA +
Preference number: 1 (lower is better)
Translates to: DSGDSTRASIRPLVL*SAKRRSRKVQLRAT
Trigger: TGTGGCCCTCAGCTGCACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGAATGCTGGCCCTAGTGGAGTCCCCTGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
3UTR GCA 90 bp TCACCAGGGGACTCCACTAGGGCCAGCATTCGGCCCTTGGTCCTGTaGAGTGCCAAACGCAGGTCCCGGAAGGTGCAGCTGAGGGCCACA +
Preference number: 1 (lower is better)
Translates to: SPGDSTRASIRPLVL*SAKRRSRKVQLRAT
Trigger: TGTGGCCCTCAGCTGCACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGAATGCTGGCCCTAGTGGAGTCCCCTGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636241.1
ENST00000636661.1
3UTR CCA 90 bp TGCAGTGCCAAACGCAGGTCCCGGAAGGTGCAGCTGAGGGCCACATaGGGAACATCCCGCACCATGATGTCCTCCACACGCACCCGGTAC +
Preference number: 1 (lower is better)
Translates to: CSAKRRSRKVQLRAT*GTSRTMMSSTRTRY
Trigger: GTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGATGTTCCCCATGTGGCCCTCAGCTGCACCTTCCGGGACCTGCGTTTGGCACTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
3UTR CCA 90 bp CAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCCACCAGGCCCTaGCGGACCCACGTCCGATTGTCAAACAGGGTGACCAGCGTCTCT +
Preference number: 1 (lower is better)
Translates to: QACEVLGGSSSSTRP*RTHVRLSNRVTSVS
Trigger: AGAGACGCTGGTCACCCTGTTTGACAATCGGACGTGGGTCCGCCAGGGCCTGGTGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR CCA 90 bp GGCTCAGCTGGGCCCCCAACAATGCCACCACCTGTGAACGCTCGATaGAGCCCAGCAGAATCATGGACTCAGGGGACTCCACTAGGGCCA +
Preference number: 1 (lower is better)
Translates to: GSAGPPTMPPPVNAR*SPAESWTQGTPLGP
Trigger: TGGCCCTAGTGGAGTCCCCTGAGTCCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGCTGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430397.5
ENST00000637538.1
ENST00000637909.1
3UTR TCA 90 bp GACCAGAGGTGCGTAGGGAGCAGGTTCAGCTGGCTGCCCTCTCTCTaGAGGATGTCAGTCCCAAGGGAAGTCATGTCTCGCCCTCCCCAC +
Preference number: 1 (lower is better)
Translates to: DQRCVGSRFSWLPSL*RMSVPREVMSRPPH
Trigger: GTGGGGAGGGCGAGACATGACTTCCCTTGGGACTGACATCCTTCAGAGAGAGGGCAGCCAGCTGAACCTGCTCCCTACGCACCTCTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636661.1
3UTR TCA 90 bp TGGCAAGTGCTGGTCCATTCCCTTTGGAACCAAGGAGACTGGTCCTaGGCTCCCTGCCCCTTCCCGAAGCTTCGACCCTGGGCAATGCCC +
Preference number: 1 (lower is better)
Translates to: WQVLVHSLWNQGDWS*APCPFPKLRPWAMP
Trigger: GGGCATTGCCCAGGGTCGAAGCTTCGGGAAGGGGCAGGGAGCTCAGGACCAGTCTCCTTGGTTCCAAAGGGAATGGACCAGCACTTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636241.1
ENST00000636661.1
3UTR CCA 90 bp GCGACAGCGTTGGCCAGGATGACGGCGATCATGACAGGCAGGATGTaGGCAATCTGGCCTGTGAGCTCGAACACGATCACAGCCGTGGAC +
Preference number: 1 (lower is better)
Translates to: ATALARMTAIMTGRM*AIWPVSSNTITAVD
Trigger: GTCCACGGCTGTGATCGTGTTCGAGCTCACAGGCCAGATTGCCCACATCCTGCCTGTCATGATCGCCGTCATCCTGGCCAACGCTGTCGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
3UTR CCA 90 bp CGCTCGATGGAGCCCAGCAGAATCATGGACTCTGGACAGAACAGGTaGAAGGACTCAGGAGCTGAGAGGGAGCCCTCCAGCCCCGTCCTT +
Preference number: 1 (lower is better)
Translates to: RSMEPSRIMDSGQNR*KDSGAEREPSSPVL
Trigger: AAGGACGGGGCTGGAGGGCTCCCTCTCAGCTCCTGAGTCCTTCCACCTGTTCTGTCCAGAGTCCATGATTCTGCTGGGCTCCATCGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636241.1
3UTR GCA 90 bp CCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTaGGCTTCTCACAGGATTCCAACTTCTCCGAAGCAGCCTCAGGGG +
Preference number: 1 (lower is better)
Translates to: PGPRHLPGRFGHASA*ASHRIPTSPKQPQG
Trigger: CCCCTGAGGCTGCTTCGGAGAAGTTGGAATCCTGTGAGAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR CCA 90 bp GGCTCAGCTGGGCCCCCAACAATGCCACCACCTGTGAACGCTCGATaGAGCCCAGCAGAATCATGGACTCTGGACAGAACAGGTGGAAGG +
Preference number: 1 (lower is better)
Translates to: GSAGPPTMPPPVNAR*SPAESWTLDRTGGR
Trigger: CCTTCCACCTGTTCTGTCCAGAGTCCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGCTGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636241.1
3UTR TCA 90 bp CAGAATCATGGACTCTGGACAGAACAGGTGGAAGGACTCAGGAGCTaGGAGGGAGCCCTCCAGCCCCGTCCTTCTCTCACACTCAGAGTG +
Preference number: 1 (lower is better)
Translates to: QNHGLWTEQVEGLRS*EGALQPRPSLTLRV
Trigger: CACTCTGAGTGTGAGAGAAGGACGGGGCTGGAGGGCTCCCTCTCAGCTCCTGAGTCCTTCCACCTGTTCTGTCCAGAGTCCATGATTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636241.1
3UTR GCA 90 bp AGGTGCTGCTGTCCGTATGAATTCCATCTGGGAACCAGGCAGCCATaGTTTCACCCACCAGACGCCCAAATGCTGCTCCTTCAGGGAGGG +
Preference number: 1 (lower is better)
Translates to: RCCCPYEFHLGTRQP*FHPPDAQMLLLQGG
Trigger: CCCTCCCTGAAGGAGCAGCATTTGGGCGTCTGGTGGGTGAAAGCATGGCTGCCTGGTTCCCAGATGGAATTCATACGGACAGCAGCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636180.1
3UTR CCA 90 bp CCCAGGCACAATCCGGTAGGTGCTGCTGTCCGTATGAATTCCATCTaGGAACCAGGCAGCCATGCTTTCACCCACCAGACGCCCAAATGC +
Preference number: 1 (lower is better)
Translates to: PRHNPVGAAVRMNSI*EPGSHAFTHQTPKC
Trigger: GCATTTGGGCGTCTGGTGGGTGAAAGCATGGCTGCCTGGTTCCCAGATGGAATTCATACGGACAGCAGCACCTACCGGATTGTGCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR CCA 90 bp CCAGGGCAGGGCCTATCTTCCTGCCTCTGGAAGACTTGTTGCAGGTaGGTAGTGGGTCAGATTCCAGGTAGGATGAACTGGGAGAAGCTG +
Preference number: 1 (lower is better)
Translates to: PGQGLSSCLWKTCCR*VVGQIPGRMNWEKL
Trigger: CAGCTTCTCCCAGTTCATCCTACCTGGAATCTGACCCACTACCCACCTGCAACAAGTCTTCCAGAGGCAGGAAGATAGGCCCTGCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR CCA 90 bp TTTGACTGGGCCATTCTCTCCCCATCACTGTCCCCTGACCTACTGTaGCCCTTATACAACTCAAAGCAGCCTGGAGAGGAGCCGAGAGCC +
Preference number: 1 (lower is better)
Translates to: FDWAILSPSLSPDLL*PLYNSKQPGEEPRA
Trigger: GGCTCTCGGCTCCTCTCCAGGCTGCTTTGAGTTGTATAAGGGCCACAGTAGGTCAGGGGACAGTGATGGGGAGAGAATGGCCCAGTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636661.1
3UTR CCA 90 bp ACAATGCCACCACCTGTGAACGCTCGATGGAGCCCAGCAGAATCATaGACTCTGGACAGAACAGGTGGAAGGACTCAGGAGCTGAGAGGG +
Preference number: 1 (lower is better)
Translates to: TMPPPVNARWSPAES*TLDRTGGRTQELRG
Trigger: CCCTCTCAGCTCCTGAGTCCTTCCACCTGTTCTGTCCAGAGTCCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636241.1
3UTR CCA 90 bp CTTTCCCATGGCACTGTGGAGAGGCTTCGAGGAGTGAGCACTGCGTaGCAGGTGCTTAGAAGGGCAAGCTATGTAAAGGTTAGCAGTGTA +
Preference number: 1 (lower is better)
Translates to: LSHGTVERLRGVSTA*QVLRRASYVKVSSV
Trigger: TACACTGCTAACCTTTACATAGCTTGCCCTTCTAAGCACCTGCCACGCAGTGCTCACTCCTCGAAGCCTCTCCACAGTGCCATGGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638134.1
3UTR TCA 90 bp GTTATTCCACCCTCCACCCTCAGAAGCCCATCAGGGCATATTGTGTaGTGGGGTGGAGAAGTTTCTGCCTCTCTTTGTCTCTCTGCAGTG +
Preference number: 1 (lower is better)
Translates to: VIPPSTLRSPSGHIV*WGGEVSASLCLSAV
Trigger: CACTGCAGAGAGACAAAGAGAGGCAGAAACTTCTCCACCCCATCACACAATATGCCCTGATGGGCTTCTGAGGGTGGAGGGTGGAATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636661.1
3UTR GCA 90 bp GCAGGATCAATTTTGCAGTCACTGAAGTTGACAGGTTCATCTAGTTaGTGCTCCTCCCACTCCAGAATCTCTTCAGGGCTCATCTCGCCT +
Preference number: 1 (lower is better)
Translates to: AGSILQSLKLTGSSS*CSSHSRISSGLISP
Trigger: AGGCGAGATGAGCCCTGAAGAGATTCTGGAGTGGGAGGAGCAGCAACTAGATGAACCTGTCAACTTCAGTGACTGCAAAATTGATCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR TCA 90 bp GAGGTCAGAGCAGAGCCTTGGCTCTTTCATGAAAACACTCAGTCCTaGCAGAAGGTCTCCTTTGCTGTTTATGATACGATAGCCCCAAGG +
Preference number: 1 (lower is better)
Translates to: EVRAEPWLFHENTQS*QKVSFAVYDTIAPR
Trigger: CCTTGGGGCTATCGTATCATAAACAGCAAAGGAGACCTTCTGTCAGGACTGAGTGTTTTCATGAAAGAGCCAAGGCTCTGCTCTGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636661.1
3UTR CCA 90 bp TCCTTTGCTGTTTATGATACGATAGCCCCAAGGCTGATGGTGGACTaGGGTTATTCTAAGAGCAGGGGTCTGACCCAAAGACCTTTCTGT +
Preference number: 1 (lower is better)
Translates to: SFAVYDTIAPRLMVD*GYSKSRGLTQRPFC
Trigger: ACAGAAAGGTCTTTGGGTCAGACCCCTGCTCTTAGAATAACCCCAGTCCACCATCAGCCTTGGGGCTATCGTATCATAAACAGCAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636661.1
3UTR-3UTR GCA 90 bp GTCTGGGTGGCTCTGCGCTCCTGCATGTGCTGCCGCCGGCGGGCTGGGCTCAGCGTGGCTCTGCGCTCCTaGATGTGCTGCCGCCGGCGG +
Preference number: 2 (lower is better)
Translates to: VWVALRSCMCCRRRAGLSVALRS*MCCRRR
Trigger: CCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCAC...GCTGAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCACCCAGAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp TCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCTGGTGGCGGCCCCAGCGCTCCTGCATGTGCTaGCGCCGGCGGGCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: SRTMMSSTRTRYCWWRPQRSCMC*RRRAGL
Trigger: GAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCG...CTGGGGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp GTCTGGGTGGCTCTGCGCTCCTGCATGTGCTGCCGCCGGCGGGCTGGGCTCAGCCCCGGAAGGTGCAGCTaGGGGCCACATGGGGAACAT +
Preference number: 2 (lower is better)
Translates to: VWVALRSCMCCRRRAGLSPGRCS*GPHGEH
Trigger: ATGTTCCCCATGTGGCCCTCAGCTGCACCTTCCGGG...GCTGAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCACCCAGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp TCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCTGGTGGCGGCCCCAGGGCTCCGGAGGGCGATaGCTGCCGACTCTGCGCTCC +
Preference number: 2 (lower is better)
Translates to: SRTMMSSTRTRYCWWRPQGSGGR*LPTLRS
Trigger: GGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCC...CTGGGGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp CATGACGGGAGTGGGGCCCCCAGAGTGCATGCACCTCAGTGGTCTCCGTGTCACCGCTCCTGCATGTGCTaGCGCCGGCGGGCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: HDGSGAPRVHAPQWSPCHRSCMC*RRRAGL
Trigger: GAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCG...GTGACACGGAGACCACTGAGGTGCATGCACTCTGGGGGCCCCACTCCCGTCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp AGGGGCGGCCGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCTTCCGCTCCTGCATGTGCTaGCGCCGGCGGGCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: RGGRTFTPCAVTEPSMAFRSCMC*RRRAGL
Trigger: GAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCG...GAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGGCCGCCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp AGTGGGGCCCCCAGAGTGCATGCACCTCAGTGGTCTCCGTGTCACTGCTGCTGGCTGCGCTCCTGCATGTaGTGCCGCCGGCGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: SGAPRVHAPQWSPCHCCWLRSCM*CRRRAG
Trigger: CCCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAG...CCAGCAGCAGTGACACGGAGACCACTGAGGTGCATGCACTCTGGGGGCCCCACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp ATTTGTCGTCGCTGTCGGAAGGGCTGCCCTCCCGGGGGAGGCCATGACGGGAGTGGCTCCGGAGGGCGATaGCTGCCGACTCTGCGCTCC +
Preference number: 2 (lower is better)
Translates to: ICRRCRKGCPPGGGHDGSGSGGR*LPTLRS
Trigger: GGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCC...ACTCCCGTCATGGCCTCCCCCGGGAGGGCAGCCCTTCCGACAGCGACGACAAAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp GGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGACTCTCTCCGACACTGTCTCGGAAGCTaGCGAGGGGCGGCCGGACTT +
Preference number: 2 (lower is better)
Translates to: GSGGRCLPTLRSLWDSLRHCLGS*RGAAGL
Trigger: AAGTCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTG...TCGGAGAGAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp GAGAGGTCTGGGTGGCTCTGCGCTCCTGCATGTGCTGCCGCCGGCGGGCTGGGCTGGGTGGCCAAGGGCTaGGTGGCCTCGCATATCTCA +
Preference number: 2 (lower is better)
Translates to: ERSGWLCAPACAAAGGLGWVAKG*VASHIS
Trigger: TGAGATATGCGAGGCCACCCAGCCCTTGGCCACCCA...GCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCACCCAGACCTCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636661.1
3UTR-3UTR CCA 90 bp GGGGTGGACTGCCACAGAAGAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCGGCCCCACAGGGAACTaGGATGGTGGTGGCCAGTGC +
Preference number: 2 (lower is better)
Translates to: GVDCHRRGSGGRCLPTLRGPTGN*DGGGQC
Trigger: GCACTGGCCACCACCATCCCAGTTCCCTGTGGGGCC...GCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTGGCAGTCCACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp GGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGACTCTCTCCGACACTGGGCCCCCTCTTaGGTGCAGGCTTTAGGGGCT +
Preference number: 2 (lower is better)
Translates to: GSGGRCLPTLRSLWDSLRHWAPS*VQALGA
Trigger: AGCCCCTAAAGCCTGCACTCAAGAGGGGGCCCAGTG...TCGGAGAGAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp CCGTGTCACTGCTGCTGGTGGCACTGTCTCGGAAGCTGGCGAGGGGCGGCCGGACACTGGGCCCCCTCTTaGGTGCAGGCTTTAGGGGCT +
Preference number: 2 (lower is better)
Translates to: PCHCCWWHCLGSWRGAAGHWAPS*VQALGA
Trigger: AGCCCCTAAAGCCTGCACTCAAGAGGGGGCCCAGTG...TCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTGCCACCAGCAGCAGTGACACGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp GGGGTGGACTGCCACAGAAGAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCCGGCCCTTGGTCCTGTaGAGTGCCAAACGCAGGTCC +
Preference number: 2 (lower is better)
Translates to: GVDCHRRGSGGRCLPTLRRPLVL*SAKRRS
Trigger: GGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCG...GCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTGGCAGTCCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp CATGACGGGAGTGGGGCCCCCAGAGTGCATGCACCTCAGTGGTCTCCGTGTCACCGCTGTCGGAAGGGCTaGCCTCCCGGGGGAGGCCAT +
Preference number: 2 (lower is better)
Translates to: HDGSGAPRVHAPQWSPCHRCRKG*PPGGGH
Trigger: ATGGCCTCCCCCGGGAGGGCAGCCCTTCCGACAGCG...GTGACACGGAGACCACTGAGGTGCATGCACTCTGGGGGCCCCACTCCCGTCATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp TGGAGAGGTCTGGGTGGCTCTGCGCTCCTGCATGTGCTGCCGCCGGCGGGCTGGATGCACATTCTGGGCTaGCGGGCATGGCTAGCACCA +
Preference number: 2 (lower is better)
Translates to: WRGLGGSALLHVLPPAGWMHILG*RAWLAP
Trigger: TGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCAT...CCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCACCCAGACCTCTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp CCGTGTCACTGCTGCTGGTGGCACTGTCTCGGAAGCTGGCGAGGGGCGGCCGGACAATGCCACCACCTGTaGACGCTCGATGGAGCCCAG +
Preference number: 2 (lower is better)
Translates to: PCHCCWWHCLGSWRGAAGQCHHL*TLDGAQ
Trigger: CTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTG...TCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTGCCACCAGCAGCAGTGACACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp AGGGGGTGGACTGCCACAGAAGAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCCACTGGGCCCCCTCTTaGGTGCAGGCTTTAGGGGCT +
Preference number: 2 (lower is better)
Translates to: RGWTATEEAPEGDACRLCHWAPS*VQALGA
Trigger: AGCCCCTAAAGCCTGCACTCAAGAGGGGGCCCAGTG...GCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTGGCAGTCCACCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp GCGAGGGGCGGCCGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCAGGTCAGCGTGGAGATaGGCAGGGTCACCAGAGCCG +
Preference number: 2 (lower is better)
Translates to: ARGGRTFTPCAVTEPSMARSAWR*AGSPEP
Trigger: CGGCTCTGGTGACCCTGCTCATCTCCACGCTGACCT...GGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGGCCGCCCCTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636180.1
ENST00000636661.1
3UTR-3UTR GCA 90 bp CCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTCTCTGCGCTCCTGCATGTaGTGCCGCCGGCGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: PGPRHLPGRFGHASACASLRSCM*CRRRAG
Trigger: CCCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAG...AGAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp ATGGACTCAGGGGACTCCACTAGGGCCAGCATTCGGCCCTTGGTCCTGTGCAGTCGCACCCGGTACTGCTaGTGGCGGCCCCAGCCGAGC +
Preference number: 2 (lower is better)
Translates to: MDSGDSTRASIRPLVLCSRTRYC*WRPQPS
Trigger: GCTCGGCTGGGGCCGCCACCAGCAGTACCGGGTGCG...ACTGCACAGGACCAAGGGCCGAATGCTGGCCCTAGTGGAGTCCCCTGAGTCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR CCA 90 bp CAGCCTCAGGGGGTGGACTGCCACAGAAGAGGCTCCGGAGGGCGATGCCTGCCGCAGCTGAGGGCCACATaGGGAACATCCCGCACCATG +
Preference number: 2 (lower is better)
Translates to: QPQGVDCHRRGSGGRCLPQLRAT*GTSRTM
Trigger: CATGGTGCGGGATGTTCCCCATGTGGCCCTCAGCTG...CGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTGGCAGTCCACCCCCTGAGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp GAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGACTCTCTCCACTCTGCGCTCCCTGTaGGACTCTCTCCGAGGTTCC +
Preference number: 2 (lower is better)
Translates to: EAPEGDACRLCAPCGTLSTLRSL*DSLRGS
Trigger: GGAACCTCGGAGAGAGTCCCACAGGGAGCGCAGAGT...GGAGAGAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp GGCCACCCACGAGGGGCTCATTGGCATTTGTCGTCGCTGTCGGAAGGGCTGCCCGGAGCAGGGGTCAAGTaGCCCCAACCCATCCTGCCA +
Preference number: 2 (lower is better)
Translates to: GHPRGAHWHLSSLSEGLPGAGVK*PQPILP
Trigger: TGGCAGGATGGGTTGGGGTCACTTGACCCCTGCTCC...GGGCAGCCCTTCCGACAGCGACGACAAATGCCAATGAGCCCCTCGTGGGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp CACAGAAGAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGACCAATGCCACCACCTGTaGACGCTCGATGGAGCCCAG +
Preference number: 2 (lower is better)
Translates to: HRRGSGGRCLPTLRSLWDQCHHL*TLDGAQ
Trigger: CTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTG...GTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp CTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGACTCTCTCCGAGGCTTGGTCCTGTGCAGTaGCAAACGCAGGTCCCGGAA +
Preference number: 2 (lower is better)
Translates to: LRRAMPADSALPVGLSPRLGPVQ*QTQVPE
Trigger: TTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAG...CCTCGGAGAGAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp ACATCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCTGGTGGCGGCCCCGGCCCTTGGTCCTGTaGAGTGCCAAACGCAGGTCC +
Preference number: 2 (lower is better)
Translates to: TSRTMMSSTRTRYCWWRPRPLVL*SAKRRS
Trigger: GGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCG...GGGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGATGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR GCA 90 bp TCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTCGTGGCTCTGCGCTCCTaGATGTGCTGCCGCCGGCGG +
Preference number: 2 (lower is better)
Translates to: SRSASLAREIRTRFSLRFVALRS*MCCRRR
Trigger: CCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCAC...GAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp CCCACGAGGGGCTCATTGGCATTTGTCGTCGCTGTCGGAAGGGCTGCCCTCCCGGATGCCTGCCGACTCTaGGCTCCCTGTGGGACTCTC +
Preference number: 2 (lower is better)
Translates to: PTRGSLAFVVAVGRAALPDACRL*APCGTL
Trigger: GAGAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATC...CGGGAGGGCAGCCCTTCCGACAGCGACGACAAATGCCAATGAGCCCCTCGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp GCCACAGAAGAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGCCAGGTAGGATGAACTaGGAGAAGCTGGCACCCCAG +
Preference number: 2 (lower is better)
Translates to: ATEEAPEGDACRLCAPCGPGRMN*EKLAPQ
Trigger: CTGGGGTGCCAGCTTCTCCCAGTTCATCCTACCTGG...CCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp TGGAGAGGTCTGGGTGGCTCTGCGCTCCTGCATGTGCTGCCGCCGGCGGGCTGGAGGATGTGGGCAATCTaGCCTGTGAGCTCGAACACG +
Preference number: 2 (lower is better)
Translates to: WRGLGGSALLHVLPPAGWRMWAI*PVSSNT
Trigger: CGTGTTCGAGCTCACAGGCCAGATTGCCCACATCCT...CCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCACCCAGACCTCTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp GCTGGGCCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCAGCAGAAACCCGGTACTGCTGGTaGCGGCCCCAGCCGAGCTCA +
Preference number: 2 (lower is better)
Translates to: AGPPTMPPPVNARWSPAETRYCW*RPQPSS
Trigger: TGAGCTCGGCTGGGGCCGCCACCAGCAGTACCGGGT...TTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp GGCTCATCTCGCCTTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTACCCGGTACTGCTGGTaGCGGCCCCAGCCGAGCTCA +
Preference number: 2 (lower is better)
Translates to: GSSRLPGPRHLPGRFGHATRYCW*RPQPSS
Trigger: TGAGCTCGGCTGGGGCCGCCACCAGCAGTACCGGGT...AGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAAGGCGAGATGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp CCGTGTCACTGCTGCTGGTGGCACTGTCTCGGAAGCTGGCGAGGGGCGGCCGGAGTGCATGCACCTCAGTaGTCTCCGTGTCACTGCTGC +
Preference number: 2 (lower is better)
Translates to: PCHCCWWHCLGSWRGAAGVHAPQ*SPCHCC
Trigger: GCAGCAGTGACACGGAGACCACTGAGGTGCATGCAC...TCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTGCCACCAGCAGCAGTGACACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp ACCATGATGTCCTCCACACGCACCCGGTACTGCTGGTGGCGGCCCCAGCCGAGCGGGCAATCTGGCCTGTaGGCTCGAACACGATCACAG +
Preference number: 2 (lower is better)
Translates to: TMMSSTRTRYCWWRPQPSGQSGL*ARTRSQ
Trigger: CTGTGATCGTGTTCGAGCTCACAGGCCAGATTGCCC...GCTCGGCTGGGGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR TCA 90 bp CTGGGCTCAGCTGGGCCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCCGGAAGGTGCAGCTaGGGGCCACATGGGGAACAT +
Preference number: 2 (lower is better)
Translates to: LGSAGPPTMPPPVNARWSPGRCS*GPHGEH
Trigger: ATGTTCCCCATGTGGCCCTCAGCTGCACCTTCCGGG...GCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGCTGAGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp CAGAAGAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGACTCGGCTGCTGGGAAGGCTaGGTCTTCTGTGTTCACCTG +
Preference number: 2 (lower is better)
Translates to: QKRLRRAMPADSALPVGLGCWEG*VFCVHL
Trigger: CAGGTGAACACAGAAGACTCAGCCTTCCCAGCAGCC...GAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp GCGAGGGGCGGCCGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCGGCTGCTGGGAAGGCTaGGTCTTCTGTGTTCACCTG +
Preference number: 2 (lower is better)
Translates to: ARGGRTFTPCAVTEPSMAGCWEG*VFCVHL
Trigger: CAGGTGAACACAGAAGACTCAGCCTTCCCAGCAGCC...GGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGGCCGCCCCTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp AGGGGCGGCCGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCTTCCACTGGGCCCCCTCTTaGGTGCAGGCTTTAGGGGCT +
Preference number: 2 (lower is better)
Translates to: RGGRTFTPCAVTEPSMAFHWAPS*VQALGA
Trigger: AGCCCCTAAAGCCTGCACTCAAGAGGGGGCCCAGTG...GAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGGCCGCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp CGTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCCACCAGGAGGTCAGCGTGGAGATaGGCAGGGTCACCAGAGCCG +
Preference number: 2 (lower is better)
Translates to: RGGFQACEVLGGSSSSTRRSAWR*AGSPEP
Trigger: CGGCTCTGGTGACCCTGCTCATCTCCACGCTGACCT...CCTGGTGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636661.1
ENST00000638134.1
3UTR-3UTR TCA 90 bp CCCGACCACAGCGTAGCCCCCAGGCACAATCCGGTAGGTGCTGCTGTCCGTATGAGGTCAGCGTGGAGATaGGCAGGGTCACCAGAGCCG +
Preference number: 2 (lower is better)
Translates to: PDHSVAPRHNPVGAAVRMRSAWR*AGSPEP
Trigger: CGGCTCTGGTGACCCTGCTCATCTCCACGCTGACCT...CATACGGACAGCAGCACCTACCGGATTGTGCCTGGGGGCTACGCTGTGGTCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636661.1
ENST00000638134.1
3UTR-3UTR GCA 90 bp GTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCCACCAGGCGCCTCCAGCTGTAGCTaGCTCCTGCCTTCCGAAGGC +
Preference number: 2 (lower is better)
Translates to: VVGSRPVRCWVVLAPPPGASSCS*LLPSEG
Trigger: GCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGC...GCCTGGTGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp GGCAATCTGGCCTGTGAGCTCGAACACGATCACAGCCGTGGACACTGTGTGTGTCGCTCCTGCATGTGCTaGCGCCGGCGGGCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: GNLACELEHDHSRGHCVCRSCMC*RRRAGL
Trigger: GAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCG...ACACACACAGTGTCCACGGCTGTGATCGTGTTCGAGCTCACAGGCCAGATTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp ACTGCCACAGAAGAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGAACCAGGCAGCCATaGTTTCACCCACCAGACGCC +
Preference number: 2 (lower is better)
Translates to: TATEEAPEGDACRLCAPCGTRQP*FHPPDA
Trigger: GGCGTCTGGTGGGTGAAAGCATGGCTGCCTGGTTCC...ACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTGGCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp CTCGCCTTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGTGTGTCACCGCTCCTaGCAGCGCAGCTGCCCCGAC +
Preference number: 2 (lower is better)
Translates to: LAFQVRVTCQGDSDTLQLVCHRS*QRSCPD
Trigger: GTCGGGGCAGCTGCGCTGGCAGGAGCGGTGACACAC...AAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAAGGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp CAGAAGAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGACTCCCAGGTAGGATGAACTaGGAGAAGCTGGCACCCCAG +
Preference number: 2 (lower is better)
Translates to: QKRLRRAMPADSALPVGLPGRMN*EKLAPQ
Trigger: CTGGGGTGCCAGCTTCTCCCAGTTCATCCTACCTGG...GAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp GGGGTGGACTGCCACAGAAGAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCATGACAGGCAGGATGTaGGCAATCTGGCCTGTGAGC +
Preference number: 2 (lower is better)
Translates to: GVDCHRRGSGGRCLPTLRMTGRM*AIWPVS
Trigger: GCTCACAGGCCAGATTGCCCACATCCTGCCTGTCAT...GCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTGGCAGTCCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp GCCACCACCTGTGAACGCTCGATGGAGCCCAGCAGAATCATGGACTCAGGGGACACCCGGTACTGCTGGTaGCGGCCCCAGCCGAGCTCA +
Preference number: 2 (lower is better)
Translates to: ATTCERSMEPSRIMDSGDTRYCW*RPQPSS
Trigger: TGAGCTCGGCTGGGGCCGCCACCAGCAGTACCGGGT...GTCCCCTGAGTCCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR CCA 90 bp CACATGGGGAACATCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCTGACCCGGTACTGCTGGTaGCGGCCCCAGCCGAGCTCA +
Preference number: 2 (lower is better)
Translates to: HMGNIPHHDVLHTHPVLLTRYCW*RPQPSS
Trigger: TGAGCTCGGCTGGGGCCGCCACCAGCAGTACCGGGT...CAGCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGATGTTCCCCATGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR CCA 90 bp AGGGGGTGGACTGCCACAGAAGAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCCCAGCATTCGGCCCTTaGTCCTGTGCAGTGCCAAAC +
Preference number: 2 (lower is better)
Translates to: RGWTATEEAPEGDACRLCPAFGP*SCAVPN
Trigger: GTTTGGCACTGCACAGGACCAAGGGCCGAATGCTGG...GCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTGGCAGTCCACCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp ACTGCCACAGAAGAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTAGCAGCCTCAGGGGGTaGACTGCCACAGAAGAGGCT +
Preference number: 2 (lower is better)
Translates to: TATEEAPEGDACRLCAPCSSLRG*TATEEA
Trigger: AGCCTCTTCTGTGGCAGTCCACCCCCTGAGGCTGCT...ACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTGGCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp GGCTCATCTCGCCTTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCCTCCACCAGGCCCTaGCGGACCCACGTCCGATTG +
Preference number: 2 (lower is better)
Translates to: GSSRLPGPRHLPGRFGHASSTRP*RTHVRL
Trigger: CAATCGGACGTGGGTCCGCCAGGGCCTGGTGGAGGA...AGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAAGGCGAGATGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp CACAGAAGAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGACCACAGGGAACTGGGATaGTGGTGGCCAGTGCAGACA +
Preference number: 2 (lower is better)
Translates to: HRRGSGGRCLPTLRSLWDHRELG*WWPVQT
Trigger: TGTCTGCACTGGCCACCACCATCCCAGTTCCCTGTG...GTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp GGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGACTCTCTCCGAACACGATCACAGCCGTaGACACTGTGTGTGTCACCG +
Preference number: 2 (lower is better)
Translates to: GSGGRCLPTLRSLWDSLRTRSQP*TLCVSP
Trigger: CGGTGACACACACAGTGTCCACGGCTGTGATCGTGT...TCGGAGAGAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp TCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCTGGTGGCGGCCCCAGGGAGTGAGCACTGCGTaGCAGGTGCTTAGAAGGGCA +
Preference number: 2 (lower is better)
Translates to: SRTMMSSTRTRYCWWRPQGVSTA*QVLRRA
Trigger: TGCCCTTCTAAGCACCTGCCACGCAGTGCTCACTCC...CTGGGGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638134.1
3UTR-3UTR TCA 90 bp CCTTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCGGAGCAGGGGTCAAGTaGCCCCAACCCATCCTGCCA +
Preference number: 2 (lower is better)
Translates to: PSRSASLAREIRTRFSLRGAGVK*PQPILP
Trigger: TGGCAGGATGGGTTGGGGTCACTTGACCCCTGCTCC...GCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp TGGACTCAGGGGACTCCACTAGGGCCAGCATTCGGCCCTTGGTCCTGTGCAGTGGGAGCAGGGGTCAAGTaGCCCCAACCCATCCTGCCA +
Preference number: 2 (lower is better)
Translates to: WTQGTPLGPAFGPWSCAVGAGVK*PQPILP
Trigger: TGGCAGGATGGGTTGGGGTCACTTGACCCCTGCTCC...CACTGCACAGGACCAAGGGCCGAATGCTGGCCCTAGTGGAGTCCCCTGAGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430397.5
ENST00000637909.1
3UTR-3UTR TCA 90 bp CGGCCCTTGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGTGCAGCTGAGGGGGCAATCTGGCCTGTaGGCTCGAACACGATCACAG +
Preference number: 2 (lower is better)
Translates to: RPLVLCSAKRRSRKVQLRGQSGL*ARTRSQ
Trigger: CTGTGATCGTGTTCGAGCTCACAGGCCAGATTGCCC...CCTCAGCTGCACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR TCA 90 bp CATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGGCTGAACATCCCGCACCATaGTGTCCTCCACACGCACCC +
Preference number: 2 (lower is better)
Translates to: HSGLTGMASTILGHPRGAEHPAP*CPPHAP
Trigger: GGGTGCGTGTGGAGGACATCATGGTGCGGGATGTTC...AGCCCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp CTGGGCTCAGCTGGGCCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCGAACATCCCGCACCATaGTGTCCTCCACACGCACCC +
Preference number: 2 (lower is better)
Translates to: LGSAGPPTMPPPVNARWSEHPAP*CPPHAP
Trigger: GGGTGCGTGTGGAGGACATCATGGTGCGGGATGTTC...GCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGCTGAGCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp AGTGGGGCCCCCAGAGTGCATGCACCTCAGTGGTCTCCGTGTCACTGCTGCTGGTCACACCCTGTGCTGTaGCAGAGCCCTCGATGGCCT +
Preference number: 2 (lower is better)
Translates to: SGAPRVHAPQWSPCHCCWSHPVL*QSPRWP
Trigger: AGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGA...CCAGCAGCAGTGACACGGAGACCACTGAGGTGCATGCACTCTGGGGGCCCCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp CTGGTGACACTGGGCCCCCTCTTGAGTGCAGGCTTTAGGGGCTTGTGGGTCTCCGCCTCCAGCTGTAGCTaGCTCCTGCCTTCCGAAGGC +
Preference number: 2 (lower is better)
Translates to: LVTLGPLLSAGFRGLWVSASSCS*LLPSEG
Trigger: GCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGC...GGAGACCCACAAGCCCCTAAAGCCTGCACTCAAGAGGGGGCCCAGTGTCACCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp TCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTCTCACAGCCGGAGGGCGATGCCTaGCGACTCTGCGCTCCCTGT +
Preference number: 2 (lower is better)
Translates to: SASLAREIRTRFSLRFSQPEGDA*RLCAPC
Trigger: ACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGG...CTGTGAGAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp ACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCTTCCGGAGCTCCTTTGGCTCCGGAGGGCGATaGCTGCCGACTCTGCGCTCC +
Preference number: 2 (lower is better)
Translates to: TFTPCAVTEPSMAFRSSFGSGGR*LPTLRS
Trigger: GGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCC...AAAGGAGCTCCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp GAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGACTCTCTCCGGACACGCTTCAGCTTaGGCTTCTCACAGGATTCCA +
Preference number: 2 (lower is better)
Translates to: EAPEGDACRLCAPCGTLSGHASA*ASHRIP
Trigger: TGGAATCCTGTGAGAAGCGCAAGCTGAAGCGTGTCC...GGAGAGAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp CCGTGTCACTGCTGCTGGTGGCACTGTCTCGGAAGCTGGCGAGGGGCGGCCGGAGGACACGCTTCAGCTTaGGCTTCTCACAGGATTCCA +
Preference number: 2 (lower is better)
Translates to: PCHCCWWHCLGSWRGAAGGHASA*ASHRIP
Trigger: TGGAATCCTGTGAGAAGCGCAAGCTGAAGCGTGTCC...TCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTGCCACCAGCAGCAGTGACACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp CTGGCGAGGGGCGGCCGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGTCCAGGCCTGTGAGGTaGTGGGTGGTTCTAGCTCCT +
Preference number: 2 (lower is better)
Translates to: LARGGRTFTPCAVTEPSMSRPVR*WVVLAP
Trigger: AGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGA...CATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGGCCGCCCCTCGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp GCTGTGACAGAGCCCTCGATGGCCTTCCGGAGCTCCTTTAGAGTAACGATTCCACGCACCCGGTACTGCTaGTGGCGGCCCCAGCCGAGC +
Preference number: 2 (lower is better)
Translates to: AVTEPSMAFRSSFRVTIPRTRYC*WRPQPS
Trigger: GCTCGGCTGGGGCCGCCACCAGCAGTACCGGGTGCG...TGGAATCGTTACTCTAAAGGAGCTCCGGAAGGCCATCGAGGGCTCTGTCACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp ACATCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCTGGTGGCGGCCCCCAGCATTCGGCCCTTaGTCCTGTGCAGTGCCAAAC +
Preference number: 2 (lower is better)
Translates to: TSRTMMSSTRTRYCWWRPPAFGP*SCAVPN
Trigger: GTTTGGCACTGCACAGGACCAAGGGCCGAATGCTGG...GGGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR CCA 90 bp CTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGACTCTCTCCGAGGAGCCCAGCAGAATCATaGACTCAGGGGACTCCACTA +
Preference number: 2 (lower is better)
Translates to: LRRAMPADSALPVGLSPRSPAES*TQGTPL
Trigger: TAGTGGAGTCCCCTGAGTCCATGATTCTGCTGGGCT...CCTCGGAGAGAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430397.5
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp AGTGGGGCCCCCAGAGTGCATGCACCTCAGTGGTCTCCGTGTCACTGCTGCTGGGTGGAGAGGTCTGGGTaGCTCTGCGCTCCTGCATGT +
Preference number: 2 (lower is better)
Translates to: SGAPRVHAPQWSPCHCCWVERSG*LCAPAC
Trigger: ACATGCAGGAGCGCAGAGCCACCCAGACCTCTCCAC...CCAGCAGCAGTGACACGGAGACCACTGAGGTGCATGCACTCTGGGGGCCCCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp GCTGGGGTGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAGATAGTGGAGAGGTCTaGGTGGCTCTGCGCTCCTGC +
Preference number: 2 (lower is better)
Translates to: AGVQPPAVAASCLPKAEGDSGEV*VALRSC
Trigger: GCAGGAGCGCAGAGCCACCCAGACCTCTCCACTATC...TCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCACCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp GCTGGGGTGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAACTCTGCGCTCCCTGTaGGACTCTCTCCGAGGTTCC +
Preference number: 2 (lower is better)
Translates to: AGVQPPAVAASCLPKAEGTLRSL*DSLRGS
Trigger: GGAACCTCGGAGAGAGTCCCACAGGGAGCGCAGAGT...TCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCACCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp CATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGGCTAGCAGCCTCAGGGGGTaGACTGCCACAGAAGAGGCT +
Preference number: 2 (lower is better)
Translates to: HSGLTGMASTILGHPRGASSLRG*TATEEA
Trigger: AGCCTCTTCTGTGGCAGTCCACCCCCTGAGGCTGCT...AGCCCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp GCTGGCGAGGGGCGGCCGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATTGTCACTGCTGCTGGTaGCACTGTCTCGGAAGCTGG +
Preference number: 2 (lower is better)
Translates to: AGEGRPDFHTLCCDRALDCHCCW*HCLGSW
Trigger: CCAGCTTCCGAGACAGTGCCACCAGCAGCAGTGACA...ATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGGCCGCCCCTCGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp CAGCGTGGAGATGAGCAGGGTCACCAGAGCCGGGAAGAGCAGGCGTCTAGAGTCCACATCAGTCGTGGGTaGCCAAGGGCTGGGTGGCCT +
Preference number: 2 (lower is better)
Translates to: QRGDEQGHQSREEQASRVHISRG*PRAGWP
Trigger: AGGCCACCCAGCCCTTGGCCACCCACGACTGATGTG...GACTCTAGACGCCTGCTCTTCCCGGCTCTGGTGACCCTGCTCATCTCCACGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475279.2
ENST00000636661.1
3UTR-3UTR CCA 90 bp CAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTCTCTCCTCCACCAGGCCCTaGCGGACCCACGTCCGATTG +
Preference number: 2 (lower is better)
Translates to: QVRVTCQGDSDTLQLALLSSTRP*RTHVRL
Trigger: CAATCGGACGTGGGTCCGCCAGGGCCTGGTGGAGGA...GAGAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp CTCGCCTTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGGCCCCACAGGGAACTaGGATGGTGGTGGCCAGTGC +
Preference number: 2 (lower is better)
Translates to: LAFQVRVTCQGDSDTLQLGPTGN*DGGGQC
Trigger: GCACTGGCCACCACCATCCCAGTTCCCTGTGGGGCC...AAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAAGGCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp TCGGCCCTTGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGTGCAGCTGAGCTCTCACACTCAGAGTaGGGGGCCTTGCATGCAGGC +
Preference number: 2 (lower is better)
Translates to: SALGPVQCQTQVPEGAAELSHSE*GALHAG
Trigger: GCCTGCATGCAAGGCCCCCCACTCTGAGTGTGAGAG...CTCAGCTGCACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636241.1
3UTR-3UTR TCA 90 bp GCTGGGGTGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATGCACATTCTGGGCTaGCGGGCATGGCTAGCACCA +
Preference number: 2 (lower is better)
Translates to: AGVQPPAVAASCLPKAEGMHILG*RAWLAP
Trigger: TGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCAT...TCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCACCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp GGCCGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCTTCCGGAGCATGCACATTCTGGGCTaGCGGGCATGGCTAGCACCA +
Preference number: 2 (lower is better)
Translates to: GRTFTPCAVTEPSMAFRSMHILG*RAWLAP
Trigger: TGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCAT...GCTCCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp TCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTCGGAGCAGGGGTCAAGTaGCCCCAACCCATCCTGCCA +
Preference number: 2 (lower is better)
Translates to: SRSASLAREIRTRFSLRFGAGVK*PQPILP
Trigger: TGGCAGGATGGGTTGGGGTCACTTGACCCCTGCTCC...GAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp CTGGTGACACTGGGCCCCCTCTTGAGTGCAGGCTTTAGGGGCTTGTGGGTCTCCGAACATCCCGCACCATaGTGTCCTCCACACGCACCC +
Preference number: 2 (lower is better)
Translates to: LVTLGPLLSAGFRGLWVSEHPAP*CPPHAP
Trigger: GGGTGCGTGTGGAGGACATCATGGTGCGGGATGTTC...GGAGACCCACAAGCCCCTAAAGCCTGCACTCAAGAGGGGGCCCAGTGTCACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp CTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGACTCTCTCCGAGGGTCTGCCAATACTGGTaGCATAAGCATGGTCCACTC +
Preference number: 2 (lower is better)
Translates to: LRRAMPADSALPVGLSPRVCQYW*HKHGPL
Trigger: GAGTGGACCATGCTTATGTCACCAGTATTGGCAGAC...CCTCGGAGAGAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp GGCCGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCTTCCGGAGCCGCATATCTCAGGGCTaGGGTCAGAGCAGAGCCTTG +
Preference number: 2 (lower is better)
Translates to: GRTFTPCAVTEPSMAFRSRISQG*GQSRAL
Trigger: CAAGGCTCTGCTCTGACCTCAGCCCTGAGATATGCG...GCTCCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636661.1
3UTR-3UTR GCA 90 bp CAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTCTCGCCTCCAGCTGTAGCTaGCTCCTGCCTTCCGAAGGC +
Preference number: 2 (lower is better)
Translates to: QVRVTCQGDSDTLQLALLASSCS*LLPSEG
Trigger: GCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGC...GAGAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp ACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTCTCACAGGATTCCAACGCTCCTGCATGTGCTaGCGCCGGCGGGCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: TCQGDSDTLQLALLTGFQRSCMC*RRRAGL
Trigger: GAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCG...TTGGAATCCTGTGAGAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp CTCTTCAGGGCTCATCTCGCCTTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGATGCCTGCCGACTCTaGGCTCCCTGTGGGACTCTC +
Preference number: 2 (lower is better)
Translates to: LFRAHLAFQVRVTCQGDSDACRL*APCGTL
Trigger: GAGAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATC...CGAATCTCCCTGGCAAGTGACGCGGACCTGGAAGGCGAGATGAGCCCTGAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp TCACTGCTGCTGGTGGCACTGTCTCGGAAGCTGGCGAGGGGCGGCCGGACTTTCAGGATGTGGGCAATCTaGCCTGTGAGCTCGAACACG +
Preference number: 2 (lower is better)
Translates to: SLLLVALSRKLARGGRTFRMWAI*PVSSNT
Trigger: CGTGTTCGAGCTCACAGGCCAGATTGCCCACATCCT...GAAAGTCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTGCCACCAGCAGCAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp GGCCACCCACGAGGGGCTCATTGGCATTTGTCGTCGCTGTCGGAAGGGCTGCCCAGGATGTGGGCAATCTaGCCTGTGAGCTCGAACACG +
Preference number: 2 (lower is better)
Translates to: GHPRGAHWHLSSLSEGLPRMWAI*PVSSNT
Trigger: CGTGTTCGAGCTCACAGGCCAGATTGCCCACATCCT...GGGCAGCCCTTCCGACAGCGACGACAAATGCCAATGAGCCCCTCGTGGGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp GGGCCAGCATTCGGCCCTTGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGATGACAGGCAGGATGTaGGCAATCTGGCCTGTGAGC +
Preference number: 2 (lower is better)
Translates to: GPAFGPWSCAVPNAGPGRMTGRM*AIWPVS
Trigger: GCTCACAGGCCAGATTGCCCACATCCTGCCTGTCAT...CCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGAATGCTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR CCA 90 bp GCTGCTCCAATGACAAAGACAGGCATGAAGGCCCCACAGGGAACTGGGATGGTGACCCGGTACTGCTGGTaGCGGCCCCAGCCGAGCTCA +
Preference number: 2 (lower is better)
Translates to: AAPMTKTGMKAPQGTGMVTRYCW*RPQPSS
Trigger: TGAGCTCGGCTGGGGCCGCCACCAGCAGTACCGGGT...CACCATCCCAGTTCCCTGTGGGGCCTTCATGCCTGTCTTTGTCATTGGAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR CCA 90 bp CGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCTTCCGGAGCTCCCAGCTGAGGGCCACATaGGGAACATCCCGCACCATG +
Preference number: 2 (lower is better)
Translates to: RTFTPCAVTEPSMAFRSSQLRAT*GTSRTM
Trigger: CATGGTGCGGGATGTTCCCCATGTGGCCCTCAGCTG...GGAGCTCCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp GCTGGGCCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCAGCAGAACAGCTGAGGGCCACATaGGGAACATCCCGCACCATG +
Preference number: 2 (lower is better)
Translates to: AGPPTMPPPVNARWSPAEQLRAT*GTSRTM
Trigger: CATGGTGCGGGATGTTCCCCATGTGGCCCTCAGCTG...TTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp GGCTCATCTCGCCTTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTGTGGAGAGGTCTGGGTaGCTCTGCGCTCCTGCATGT +
Preference number: 2 (lower is better)
Translates to: GSSRLPGPRHLPGRFGHAVERSG*LCAPAC
Trigger: ACATGCAGGAGCGCAGAGCCACCCAGACCTCTCCAC...AGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAAGGCGAGATGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp AGTGGGGCCCCCAGAGTGCATGCACCTCAGTGGTCTCCGTGTCACTGCTGCTGGGTGCATGCACCTCAGTaGTCTCCGTGTCACTGCTGC +
Preference number: 2 (lower is better)
Translates to: SGAPRVHAPQWSPCHCCWVHAPQ*SPCHCC
Trigger: GCAGCAGTGACACGGAGACCACTGAGGTGCATGCAC...CCAGCAGCAGTGACACGGAGACCACTGAGGTGCATGCACTCTGGGGGCCCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp ACGGGAGTGGGGCCCCCAGAGTGCATGCACCTCAGTGGTCTCCGTGTCACTGCTCCACGAGGGGCTCATTaGCATTTGTCGTCGCTGTCG +
Preference number: 2 (lower is better)
Translates to: TGVGPPECMHLSGLRVTAPRGAH*HLSSLS
Trigger: CGACAGCGACGACAAATGCCAATGAGCCCCTCGTGG...AGCAGTGACACGGAGACCACTGAGGTGCATGCACTCTGGGGGCCCCACTCCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp CACAGCGTAGCCCCCAGGCACAATCCGGTAGGTGCTGCTGTCCGTATGAATTCCGGCCCCACAGGGAACTaGGATGGTGGTGGCCAGTGC +
Preference number: 2 (lower is better)
Translates to: HSVAPRHNPVGAAVRMNSGPTGN*DGGGQC
Trigger: GCACTGGCCACCACCATCCCAGTTCCCTGTGGGGCC...GGAATTCATACGGACAGCAGCACCTACCGGATTGTGCCTGGGGGCTACGCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR CCA 90 bp GAAGCTGGCGAGGGGCGGCCGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCACACGATCACAGCCGTaGACACTGTGTGTGTCACCG +
Preference number: 2 (lower is better)
Translates to: EAGEGRPDFHTLCCDRALTRSQP*TLCVSP
Trigger: CGGTGACACACACAGTGTCCACGGCTGTGATCGTGT...GAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGGCCGCCCCTCGCCAGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp GGCTCATCTCGCCTTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTGAATCATGGACTTGGTaGCGGCCCCAGCCGAGCTCA +
Preference number: 2 (lower is better)
Translates to: GSSRLPGPRHLPGRFGHAESWTW*RPQPSS
Trigger: TGAGCTCGGCTGGGGCCGCCACCAAGTCCATGATTC...AGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAAGGCGAGATGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636180.1
3UTR CAA 90 bp AGAATCATGGACTCAGGGGACTCCACTAGGGCCAGCATTCGGCCCTaGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGTGCAGCTG +
Preference number: 2 (lower is better)
Translates to: RIMDSGDSTRASIRP*VLCSAKRRSRKVQL
Trigger: CAGCTGCACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGAATGCTGGCCCTAGTGGAGTCCCCTGAGTCCATGATTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR TCA 90 bp CCTTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCATGCACATTCTGGGCTaGCGGGCATGGCTAGCACCA +
Preference number: 2 (lower is better)
Translates to: PSRSASLAREIRTRFSLRMHILG*RAWLAP
Trigger: TGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCAT...GCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp ATTCGGCCCTTGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGTGCAGCTGGGGCAATCTGGCCTGTaGGCTCGAACACGATCACAG +
Preference number: 2 (lower is better)
Translates to: IRPLVLCSAKRRSRKVQLGQSGL*ARTRSQ
Trigger: CTGTGATCGTGTTCGAGCTCACAGGCCAGATTGCCC...CAGCTGCACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR TCA 90 bp CTCTCTCCGAGGTTCCTGGTGACACTGGGCCCCCTCTTGAGTGCAGGCTTTAGGGAACATCCCGCACCATaGTGTCCTCCACACGCACCC +
Preference number: 2 (lower is better)
Translates to: LSPRFLVTLGPLLSAGFREHPAP*CPPHAP
Trigger: GGGTGCGTGTGGAGGACATCATGGTGCGGGATGTTC...CCTAAAGCCTGCACTCAAGAGGGGGCCCAGTGTCACCAGGAACCTCGGAGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp CCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTCTGAACATCCCGCACCATaGTGTCCTCCACACGCACCC +
Preference number: 2 (lower is better)
Translates to: PGPRHLPGRFGHASACASEHPAP*CPPHAP
Trigger: GGGTGCGTGTGGAGGACATCATGGTGCGGGATGTTC...AGAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp TCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTCTCACAGCCCGGAAGGTGCAGCTaGGGGCCACATGGGGAACAT +
Preference number: 2 (lower is better)
Translates to: SASLAREIRTRFSLRFSQPGRCS*GPHGEH
Trigger: ATGTTCCCCATGTGGCCCTCAGCTGCACCTTCCGGG...CTGTGAGAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp GCTGGGGTGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAGTGAAGTGCCTGTTTTaGCTGGGCCATTCTCTCCCC +
Preference number: 2 (lower is better)
Translates to: AGVQPPAVAASCLPKAEGVKCLF*LGHSLP
Trigger: GGGGAGAGAATGGCCCAGTCAAAACAGGCACTTCAC...TCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCACCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636661.1
3UTR-3UTR GCA 90 bp CGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCTTCCGGAGCTCCGCTGTAGCTGCCTCCTaGCTTCCGAAGGCAGAAGGA +
Preference number: 2 (lower is better)
Translates to: RTFTPCAVTEPSMAFRSSAVAAS*LPKAEG
Trigger: TCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGC...GGAGCTCCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp CCTTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCGCTGTAGCTGCCTCCTaGCTTCCGAAGGCAGAAGGA +
Preference number: 2 (lower is better)
Translates to: PSRSASLAREIRTRFSLRAVAAS*LPKAEG
Trigger: TCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGC...GCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp TGTGAGCTCGAACACGATCACAGCCGTGGACACTGTGTGTGTCACCGCTCCTGCGCCTCCAGCTGTAGCTaGCTCCTGCCTTCCGAAGGC +
Preference number: 2 (lower is better)
Translates to: CELEHDHSRGHCVCHRSCASSCS*LLPSEG
Trigger: GCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGC...GCAGGAGCGGTGACACACACAGTGTCCACGGCTGTGATCGTGTTCGAGCTCACA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp ACTGCCACAGAAGAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTCTCTGGAAGACTTGTTaGAGGTGGGTAGTGGGTCAG +
Preference number: 2 (lower is better)
Translates to: TATEEAPEGDACRLCAPCLWKTC*RWVVGQ
Trigger: CTGACCCACTACCCACCTGCAACAAGTCTTCCAGAG...ACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTGGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp CCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCAGCAGAATCATGGGATGCCTGCCGACTCTaGGCTCCCTGTGGGACTCTC +
Preference number: 2 (lower is better)
Translates to: PPTMPPPVNARWSPAESWDACRL*APCGTL
Trigger: GAGAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATC...CCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp GGGCCCCCAGAGTGCATGCACCTCAGTGGTCTCCGTGTCACTGCTGCTGGTGGCGACTTTCACACCCTGTaGTGTGACAGAGCCCTCGAT +
Preference number: 2 (lower is better)
Translates to: GPPECMHLSGLRVTAAGGDFHTL*CDRALD
Trigger: ATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTC...GCCACCAGCAGCAGTGACACGGAGACCACTGAGGTGCATGCACTCTGGGGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp GCCACATGGGGAACATCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCCCAGGTAGGATGAACTaGGAGAAGCTGGCACCCCAG +
Preference number: 2 (lower is better)
Translates to: ATWGTSRTMMSSTRTRYCPGRMN*EKLAPQ
Trigger: CTGGGGTGCCAGCTTCTCCCAGTTCATCCTACCTGG...GCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGATGTTCCCCATGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp GGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGACTCTCTCCGAAAGACTTGTTGCAGGTaGGTAGTGGGTCAGATTCCA +
Preference number: 2 (lower is better)
Translates to: GSGGRCLPTLRSLWDSLRKTCCR*VVGQIP
Trigger: TGGAATCTGACCCACTACCCACCTGCAACAAGTCTT...TCGGAGAGAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp CATGACGGGAGTGGGGCCCCCAGAGTGCATGCACCTCAGTGGTCTCCGTGTCACATGACAGGCAGGATGTaGGCAATCTGGCCTGTGAGC +
Preference number: 2 (lower is better)
Translates to: HDGSGAPRVHAPQWSPCHMTGRM*AIWPVS
Trigger: GCTCACAGGCCAGATTGCCCACATCCTGCCTGTCAT...GTGACACGGAGACCACTGAGGTGCATGCACTCTGGGGGCCCCACTCCCGTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp CTGGGCTCAGCTGGGCCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCATGACAGGCAGGATGTaGGCAATCTGGCCTGTGAGC +
Preference number: 2 (lower is better)
Translates to: LGSAGPPTMPPPVNARWSMTGRM*AIWPVS
Trigger: GCTCACAGGCCAGATTGCCCACATCCTGCCTGTCAT...GCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGCTGAGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp GGCCAGCATTCGGCCCTTGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGTATGACAGGCAGGATGTaGGCAATCTGGCCTGTGAGC +
Preference number: 2 (lower is better)
Translates to: GQHSALGPVQCQTQVPEGMTGRM*AIWPVS
Trigger: GCTCACAGGCCAGATTGCCCACATCCTGCCTGTCAT...ACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGAATGCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR CCA 90 bp TCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGGCTCATATGACAGGCAGGATGTaGGCAATCTGGCCTGTGAGC +
Preference number: 2 (lower is better)
Translates to: SGLTGMASTILGHPRGAHMTGRM*AIWPVS
Trigger: GCTCACAGGCCAGATTGCCCACATCCTGCCTGTCAT...ATGAGCCCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp CAGGCAGCCATGCTTTCACCCACCAGACGCCCAAATGCTGCTCCAATGACAAAGACCCGGTACTGCTGGTaGCGGCCCCAGCCGAGCTCA +
Preference number: 2 (lower is better)
Translates to: QAAMLSPTRRPNAAPMTKTRYCW*RPQPSS
Trigger: TGAGCTCGGCTGGGGCCGCCACCAGCAGTACCGGGT...CTTTGTCATTGGAGCAGCATTTGGGCGTCTGGTGGGTGAAAGCATGGCTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR CCA 90 bp TCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGGCTCATCCTGTGAACGCTCGATaGAGCCCAGCAGAATCATGG +
Preference number: 2 (lower is better)
Translates to: SGLTGMASTILGHPRGAHPVNAR*SPAESW
Trigger: CCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGG...ATGAGCCCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp GCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTCTCACAGGATCACTGTCTCGGAAGCTaGCGAGGGGCGGCCGGACTT +
Preference number: 2 (lower is better)
Translates to: ASLAREIRTRFSLRFSQDHCLGS*RGAAGL
Trigger: AAGTCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTG...ATCCTGTGAGAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp CGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCTTCCGGAGCTCCCACAGGGAACTGGGATaGTGGTGGCCAGTGCAGACA +
Preference number: 2 (lower is better)
Translates to: RTFTPCAVTEPSMAFRSSHRELG*WWPVQT
Trigger: TGTCTGCACTGGCCACCACCATCCCAGTTCCCTGTG...GGAGCTCCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp AACATCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCTGGTGGCGGCCCCACCTGGCAAGTGCTaGTCCATTCCCTTTGGAACC +
Preference number: 2 (lower is better)
Translates to: NIPHHDVLHTHPVLLVAAPPGKC*SIPFGT
Trigger: GGTTCCAAAGGGAATGGACCAGCACTTGCCAGGTGG...GGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGATGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636241.1
3UTR-3UTR TCA 90 bp ACGGGAGTGGGGCCCCCAGAGTGCATGCACCTCAGTGGTCTCCGTGTCACTGCTAGATTCCAGGTAGGATaGACTGGGAGAAGCTGGCAC +
Preference number: 2 (lower is better)
Translates to: TGVGPPECMHLSGLRVTARFQVG*TGRSWH
Trigger: GTGCCAGCTTCTCCCAGTTCATCCTACCTGGAATCT...AGCAGTGACACGGAGACCACTGAGGTGCATGCACTCTGGGGGCCCCACTCCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp CAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTCTCGGGCAATCTGGCCTGTaGGCTCGAACACGATCACAG +
Preference number: 2 (lower is better)
Translates to: QVRVTCQGDSDTLQLALLGQSGL*ARTRSQ
Trigger: CTGTGATCGTGTTCGAGCTCACAGGCCAGATTGCCC...GAGAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp TCCGGTAGGTGCTGCTGTCCGTATGAATTCCATCTGGGAACCAGGCAGCCATGCCCCGGAAGGTGCAGCTaGGGGCCACATGGGGAACAT +
Preference number: 2 (lower is better)
Translates to: SGRCCCPYEFHLGTRQPCPGRCS*GPHGEH
Trigger: ATGTTCCCCATGTGGCCCTCAGCTGCACCTTCCGGG...GCATGGCTGCCTGGTTCCCAGATGGAATTCATACGGACAGCAGCACCTACCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR TCA 90 bp CCACAGCGTAGCCCCCAGGCACAATCCGGTAGGTGCTGCTGTCCGTATGAATTCCAATGCCACCACCTGTaGACGCTCGATGGAGCCCAG +
Preference number: 2 (lower is better)
Translates to: PQRSPQAQSGRCCCPYEFQCHHL*TLDGAQ
Trigger: CTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTG...GAATTCATACGGACAGCAGCACCTACCGGATTGTGCCTGGGGGCTACGCTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR TCA 90 bp GCCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCAGCAGAATCATGCAATGCCACCACCTGTaGACGCTCGATGGAGCCCAG +
Preference number: 2 (lower is better)
Translates to: APNNATTCERSMEPSRIMQCHHL*TLDGAQ
Trigger: CTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTG...CATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp TTCAGGGCTCATCTCGCCTTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACGGCTGCTGGGAAGGCTaGGTCTTCTGTGTTCACCTG +
Preference number: 2 (lower is better)
Translates to: FRAHLAFQVRVTCQGDSDGCWEG*VFCVHL
Trigger: CAGGTGAACACAGAAGACTCAGCCTTCCCAGCAGCC...GTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAAGGCGAGATGAGCCCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp GGGCCCCCAGAGTGCATGCACCTCAGTGGTCTCCGTGTCACTGCTGCTGGTGGCGTCTGCCAATACTGGTaGCATAAGCATGGTCCACTC +
Preference number: 2 (lower is better)
Translates to: GPPECMHLSGLRVTAAGGVCQYW*HKHGPL
Trigger: GAGTGGACCATGCTTATGTCACCAGTATTGGCAGAC...GCCACCAGCAGCAGTGACACGGAGACCACTGAGGTGCATGCACTCTGGGGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp AGGGGCGGCCGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCTTCCAGCGTCTCTTTCTGTaGGAGCTGTCCAGCCATGAA +
Preference number: 2 (lower is better)
Translates to: RGGRTFTPCAVTEPSMAFQRLFL*ELSSHE
Trigger: TTCATGGCTGGACAGCTCTCACAGAAAGAGACGCTG...GAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGGCCGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp ATTTGTCGTCGCTGTCGGAAGGGCTGCCCTCCCGGGGGAGGCCATGACGGGAGTGATTGTCAAACAGGGTaGCCAGCGTCTCTTTCTGTG +
Preference number: 2 (lower is better)
Translates to: ICRRCRKGCPPGGGHDGSDCQTG*PASLSV
Trigger: CACAGAAAGAGACGCTGGTCACCCTGTTTGACAATC...ACTCCCGTCATGGCCTCCCCCGGGAGGGCAGCCCTTCCGACAGCGACGACAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp CCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCAGCAGAATCATGGACTGAAGGACTCAGGAGCTaGGAGGGAGCCCTCCAGCCC +
Preference number: 2 (lower is better)
Translates to: PTMPPPVNARWSPAESWTEGLRS*EGALQP
Trigger: GGGCTGGAGGGCTCCCTCTCAGCTCCTGAGTCCTTC...AGTCCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636241.1
3UTR-3UTR GCA 90 bp TTTGTCGTCGCTGTCGGAAGGGCTGCCCTCCCGGGGGAGGCCATGACGGGAGTGAGAAGGAATGAAAGATaGACATTCTGGGCTGACGGG +
Preference number: 2 (lower is better)
Translates to: FVVAVGRAALPGEAMTGVRRNER*TFWADG
Trigger: CCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTCT...CACTCCCGTCATGGCCTCCCCCGGGAGGGCAGCCCTTCCGACAGCGACGACAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp TCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGGCTCATCAGGGCCTATCTTCCTaGCTCTGGAAGACTTGTTGC +
Preference number: 2 (lower is better)
Translates to: SGLTGMASTILGHPRGAHQGLSS*LWKTCC
Trigger: GCAACAAGTCTTCCAGAGGCAGGAAGATAGGCCCTG...ATGAGCCCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp GGCAATCTGGCCTGTGAGCTCGAACACGATCACAGCCGTGGACACTGTGTGTGTAGGTCTGGGTGGCTCTaGGCTCCTGCATGTGCTGCC +
Preference number: 2 (lower is better)
Translates to: GNLACELEHDHSRGHCVCRSGWL*APACAA
Trigger: GGCAGCACATGCAGGAGCGCAGAGCCACCCAGACCT...ACACACACAGTGTCCACGGCTGTGATCGTGTTCGAGCTCACAGGCCAGATTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp GCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTCTCACAGGATGATGCCTGCCGACTCTaGGCTCCCTGTGGGACTCTC +
Preference number: 2 (lower is better)
Translates to: ASLAREIRTRFSLRFSQDDACRL*APCGTL
Trigger: GAGAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATC...ATCCTGTGAGAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp TCGCCTTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGTCTCCGTGTCACTGCTaGTGGTGGCACTGTCTCGGA +
Preference number: 2 (lower is better)
Translates to: SPSRSASLAREIRTRFSLSPCHC*WWHCLG
Trigger: TCCGAGACAGTGCCACCAGCAGCAGTGACACGGAGA...CAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAAGGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp CAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTCTCTCTCCGTGTCACTGCTaGTGGTGGCACTGTCTCGGA +
Preference number: 2 (lower is better)
Translates to: QVRVTCQGDSDTLQLALLSPCHC*WWHCLG
Trigger: TCCGAGACAGTGCCACCAGCAGCAGTGACACGGAGA...GAGAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp CACATGGGGAACATCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCTGCCAGGTAGGATGAACTaGGAGAAGCTGGCACCCCAG +
Preference number: 2 (lower is better)
Translates to: HMGNIPHHDVLHTHPVLLPGRMN*EKLAPQ
Trigger: CTGGGGTGCCAGCTTCTCCCAGTTCATCCTACCTGG...CAGCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGATGTTCCCCATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp GAGGGCCACATGGGGAACATCCCGCACCATGATGTCCTCCACACGCACCCGGTAAGGATGTGGGCAATCTaGCCTGTGAGCTCGAACACG +
Preference number: 2 (lower is better)
Translates to: EGHMGNIPHHDVLHTHPVRMWAI*PVSSNT
Trigger: CGTGTTCGAGCTCACAGGCCAGATTGCCCACATCCT...TACCGGGTGCGTGTGGAGGACATCATGGTGCGGGATGTTCCCCATGTGGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR CCA 90 bp GCTGGGCCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCAGCAGAAAGGATGTGGGCAATCTaGCCTGTGAGCTCGAACACG +
Preference number: 2 (lower is better)
Translates to: AGPPTMPPPVNARWSPAERMWAI*PVSSNT
Trigger: CGTGTTCGAGCTCACAGGCCAGATTGCCCACATCCT...TTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp CACGTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCCACCAATGACAGGCAGGATGTaGGCAATCTGGCCTGTGAGC +
Preference number: 2 (lower is better)
Translates to: HVVGSRPVRCWVVLAPPPMTGRM*AIWPVS
Trigger: GCTCACAGGCCAGATTGCCCACATCCTGCCTGTCAT...TGGTGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACCACGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR CCA 90 bp CCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCAGCAGAATCATGGACTCTGCGCTCCCTGTaGGACTCTCTCCGAGGTTCC +
Preference number: 2 (lower is better)
Translates to: PPTMPPPVNARWSPAESWTLRSL*DSLRGS
Trigger: GGAACCTCGGAGAGAGTCCCACAGGGAGCGCAGAGT...CCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp AGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTCTCACCGTGTCACTGCTGCTaGTGGCACTGTCTCGGAAGC +
Preference number: 2 (lower is better)
Translates to: RSASLAREIRTRFSLRFSPCHCC*WHCLGS
Trigger: GCTTCCGAGACAGTGCCACCAGCAGCAGTGACACGG...TGAGAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp CTCTCTCCGAGGTTCCTGGTGACACTGGGCCCCCTCTTGAGTGCAGGCTTTAGGCCACGAGGGGCTCATTaGCATTTGTCGTCGCTGTCG +
Preference number: 2 (lower is better)
Translates to: LSPRFLVTLGPLLSAGFRPRGAH*HLSSLS
Trigger: CGACAGCGACGACAAATGCCAATGAGCCCCTCGTGG...CCTAAAGCCTGCACTCAAGAGGGGGCCCAGTGTCACCAGGAACCTCGGAGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp CTGGGAACCAGGCAGCCATGCTTTCACCCACCAGACGCCCAAATGCTGCTCCAATGGCCAAGGGCTGGGTaGCCTCGCATATCTCAGGGT +
Preference number: 2 (lower is better)
Translates to: LGTRQPCFHPPDAQMLLQWPRAG*PRISQG
Trigger: ACCCTGAGATATGCGAGGCCACCCAGCCCTTGGCCA...TTGGAGCAGCATTTGGGCGTCTGGTGGGTGAAAGCATGGCTGCCTGGTTCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475279.2
3UTR-3UTR CCA 90 bp CCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCAGCAGAATCATGGACCACATCAGTCGTGGGTaGCCAAGGGCTGGGTGGCCT +
Preference number: 2 (lower is better)
Translates to: PNNATTCERSMEPSRIMDHISRG*PRAGWP
Trigger: AGGCCACCCAGCCCTTGGCCACCCACGACTGATGTG...GTCCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636661.1
3UTR-3UTR CCA 90 bp CTGGCGAGGGGCGGCCGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGCGTATGAATTCCATCTaGGAACCAGGCAGCCATGCT +
Preference number: 2 (lower is better)
Translates to: LARGGRTFTPCAVTEPSMRMNSI*EPGSHA
Trigger: AGCATGGCTGCCTGGTTCCCAGATGGAATTCATACG...CATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGGCCGCCCCTCGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp TCACTGCTGCTGGTGGCACTGTCTCGGAAGCTGGCGAGGGGCGGCCGGACTTTCAGTGAAGGTCAATGTTaGGGGAAGCTGGGGTCACTT +
Preference number: 2 (lower is better)
Translates to: SLLLVALSRKLARGGRTFSEGQC*GKLGSL
Trigger: AAGTGACCCCAGCTTCCCCCAACATTGACCTTCACT...GAAAGTCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTGCCACCAGCAGCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636661.1
3UTR CAA 90 bp TCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTaGCGCTTCTCACAGGATTCCAACTTCTCCGAAGCAGCCTCAGGG +
Preference number: 2 (lower is better)
Translates to: SRSASLAREIRTRFS*RFSQDSNFSEAASG
Trigger: CCCTGAGGCTGCTTCGGAGAAGTTGGAATCCTGTGAGAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp GCTGGGGTGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGACGAAGGCAGAAGGAATaGAAGATGCACATTCTGGGC +
Preference number: 2 (lower is better)
Translates to: AGVQPPAVAASCLPKAEGRRQKE*KMHILG
Trigger: GCCCAGAATGTGCATCTTTCATTCCTTCTGCCTTCG...TCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCACCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp CAGCGTGGAGATGAGCAGGGTCACCAGAGCCGGGAAGAGCAGGCGTCTAGAGTCAGATTCCAGGTAGGATaGACTGGGAGAAGCTGGCAC +
Preference number: 2 (lower is better)
Translates to: QRGDEQGHQSREEQASRVRFQVG*TGRSWH
Trigger: GTGCCAGCTTCTCCCAGTTCATCCTACCTGGAATCT...GACTCTAGACGCCTGCTCTTCCCGGCTCTGGTGACCCTGCTCATCTCCACGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636661.1
3UTR-3UTR TCA 90 bp GCTGGGCCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCAGCAGAAAGATTCCAGGTAGGATaGACTGGGAGAAGCTGGCAC +
Preference number: 2 (lower is better)
Translates to: AGPPTMPPPVNARWSPAERFQVG*TGRSWH
Trigger: GTGCCAGCTTCTCCCAGTTCATCCTACCTGGAATCT...TTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp AGGCACAATCCGGTAGGTGCTGCTGTCCGTATGAATTCCATCTGGGAACCAGGCAGGTCAGCGTGGAGATaGGCAGGGTCACCAGAGCCG +
Preference number: 2 (lower is better)
Translates to: RHNPVGAAVRMNSIWEPGRSAWR*AGSPEP
Trigger: CGGCTCTGGTGACCCTGCTCATCTCCACGCTGACCT...GCCTGGTTCCCAGATGGAATTCATACGGACAGCAGCACCTACCGGATTGTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636661.1
ENST00000638134.1
3UTR-3UTR GCA 90 bp CCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCAGCAGAATCATGGACTCGGCCCTTGGTCCTGTaGAGTGCCAAACGCAGGTCC +
Preference number: 2 (lower is better)
Translates to: PTMPPPVNARWSPAESWTRPLVL*SAKRRS
Trigger: GGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCG...AGTCCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR GCA 90 bp CAGGCAGCCATGCTTTCACCCACCAGACGCCCAAATGCTGCTCCAATGACAAAGCGGCCCTTGGTCCTGTaGAGTGCCAAACGCAGGTCC +
Preference number: 2 (lower is better)
Translates to: QAAMLSPTRRPNAAPMTKRPLVL*SAKRRS
Trigger: GGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCG...CTTTGTCATTGGAGCAGCATTTGGGCGTCTGGTGGGTGAAAGCATGGCTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR GCA 90 bp CCACAGCGTAGCCCCCAGGCACAATCCGGTAGGTGCTGCTGTCCGTATGAATTCTCCAGGCCTGTGAGGTaGTGGGTGGTTCTAGCTCCT +
Preference number: 2 (lower is better)
Translates to: PQRSPQAQSGRCCCPYEFSRPVR*WVVLAP
Trigger: AGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGA...GAATTCATACGGACAGCAGCACCTACCGGATTGTGCCTGGGGGCTACGCTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR GCA 90 bp GAACCAGGCAGCCATGCTTTCACCCACCAGACGCCCAAATGCTGCTCCAATGACGGAACCAGGCAGCCATaGTTTCACCCACCAGACGCC +
Preference number: 2 (lower is better)
Translates to: EPGSHAFTHQTPKCCSNDGTRQP*FHPPDA
Trigger: GGCGTCTGGTGGGTGAAAGCATGGCTGCCTGGTTCC...GTCATTGGAGCAGCATTTGGGCGTCTGGTGGGTGAAAGCATGGCTGCCTGGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475279.2
ENST00000636658.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR CCA 90 bp GGCCAGCATTCGGCCCTTGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGTCTATCTTCCTGCCTCTaGAAGACTTGTTGCAGGTGG +
Preference number: 2 (lower is better)
Translates to: GQHSALGPVQCQTQVPEGLSSCL*KTCCRW
Trigger: CCACCTGCAACAAGTCTTCCAGAGGCAGGAAGATAG...ACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGAATGCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp GCAATCTGGCCTGTGAGCTCGAACACGATCACAGCCGTGGACACTGTGTGTGTCCAGCTGAGGGCCACATaGGGAACATCCCGCACCATG +
Preference number: 2 (lower is better)
Translates to: AIWPVSSNTITAVDTVCVQLRAT*GTSRTM
Trigger: CATGGTGCGGGATGTTCCCCATGTGGCCCTCAGCTG...GACACACACAGTGTCCACGGCTGTGATCGTGTTCGAGCTCACAGGCCAGATTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR CCA 90 bp AGCCCCCAGGCACAATCCGGTAGGTGCTGCTGTCCGTATGAATTCCATCTGGGACAGCTGAGGGCCACATaGGGAACATCCCGCACCATG +
Preference number: 2 (lower is better)
Translates to: SPQAQSGRCCCPYEFHLGQLRAT*GTSRTM
Trigger: CATGGTGCGGGATGTTCCCCATGTGGCCCTCAGCTG...TCCCAGATGGAATTCATACGGACAGCAGCACCTACCGGATTGTGCCTGGGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR CCA 90 bp GCTGGTCCATTCCCTTTGGAACCAAGGAGACTGGTCCTGAGCTCCCTGCCCCTTCCAGCATTCGGCCCTTaGTCCTGTGCAGTGCCAAAC +
Preference number: 2 (lower is better)
Translates to: AGPFPLEPRRLVLSSLPLPAFGP*SCAVPN
Trigger: GTTTGGCACTGCACAGGACCAAGGGCCGAATGCTGG...AAGGGGCAGGGAGCTCAGGACCAGTCTCCTTGGTTCCAAAGGGAATGGACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636241.1
ENST00000636661.1
3UTR-3UTR CCA 90 bp TTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCTTCCGGAGCTCCTTTAGAGATAGTGGAGAGGTCTaGGTGGCTCTGCGCTCCTGC +
Preference number: 2 (lower is better)
Translates to: FTPCAVTEPSMAFRSSFRDSGEV*VALRSC
Trigger: GCAGGAGCGCAGAGCCACCCAGACCTCTCCACTATC...TCTAAAGGAGCTCCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp GCAATCTGGCCTGTGAGCTCGAACACGATCACAGCCGTGGACACTGTGTGTGTCGATAGTGGAGAGGTCTaGGTGGCTCTGCGCTCCTGC +
Preference number: 2 (lower is better)
Translates to: AIWPVSSNTITAVDTVCVDSGEV*VALRSC
Trigger: GCAGGAGCGCAGAGCCACCCAGACCTCTCCACTATC...GACACACACAGTGTCCACGGCTGTGATCGTGTTCGAGCTCACAGGCCAGATTGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp TTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCTTCCGGAGCTCCTTTAGAAGCAGCCTCAGGGGGTaGACTGCCACAGAAGAGGCT +
Preference number: 2 (lower is better)
Translates to: FTPCAVTEPSMAFRSSFRSSLRG*TATEEA
Trigger: AGCCTCTTCTGTGGCAGTCCACCCCCTGAGGCTGCT...TCTAAAGGAGCTCCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp ACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTCTCACAGGATTCCAATCCTCCACCAGGCCCTaGCGGACCCACGTCCGATTG +
Preference number: 2 (lower is better)
Translates to: TCQGDSDTLQLALLTGFQSSTRP*RTHVRL
Trigger: CAATCGGACGTGGGTCCGCCAGGGCCTGGTGGAGGA...TTGGAATCCTGTGAGAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp TCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTCTCACAGAGGCCTGTGAGGTGCTaGGTGGTTCTAGCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: SASLAREIRTRFSLRFSQRPVRC*VVLAPP
Trigger: TGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCT...CTGTGAGAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR CAA 90 bp GAGCCCACCTTCATGAGAATGAAGATGACCAGGGTGAGGAAGACGTaGGCACGTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCT +
Preference number: 2 (lower is better)
Translates to: EPTFMRMKMTRVRKT*ARGGFQACEVLGGS
Trigger: AGAACCACCCAGCACCTCACAGGCCTGGAACCCACCACGTGCCAACGTCTTCCTCACCCTGGTCATCTTCATTCTCATGAAGGTGGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638134.1
3UTR-3UTR TCA 90 bp TGGGAACCAGGCAGCCATGCTTTCACCCACCAGACGCCCAAATGCTGCTCCAATGGGCAATCTGGCCTGTaGGCTCGAACACGATCACAG +
Preference number: 2 (lower is better)
Translates to: WEPGSHAFTHQTPKCCSNGQSGL*ARTRSQ
Trigger: CTGTGATCGTGTTCGAGCTCACAGGCCAGATTGCCC...ATTGGAGCAGCATTTGGGCGTCTGGTGGGTGAAAGCATGGCTGCCTGGTTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR TCA 90 bp CTCGCCTTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTCAGCGTCTCTTTCTGTaGGAGCTGTCCAGCCATGAA +
Preference number: 2 (lower is better)
Translates to: LAFQVRVTCQGDSDTLQLQRLFL*ELSSHE
Trigger: TTCATGGCTGGACAGCTCTCACAGAAAGAGACGCTG...AAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAAGGCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp CTGGTGGCGGCCCCAGCCGAGCTCAGGCAGGTAGGGCAGTTTCTTGATTCGGATGATTGTCAAACAGGGTaGCCAGCGTCTCTTTCTGTG +
Preference number: 2 (lower is better)
Translates to: LVAAPAELRQVGQFLDSDDCQTG*PASLSV
Trigger: CACAGAAAGAGACGCTGGTCACCCTGTTTGACAATC...ATCCGAATCAAGAAACTGCCCTACCTGCCTGAGCTCGGCTGGGGCCGCCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR GCA 90 bp GCACGTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCCACCAGAAGGAATGAAAGATaGACATTCTGGGCTGACGGG +
Preference number: 2 (lower is better)
Translates to: ARGGFQACEVLGGSSSSTRRNER*TFWADG
Trigger: CCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTCT...GGTGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACCACGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp TCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTCCTCTGGAAGACTTGTTaGAGGTGGGTAGTGGGTCAG +
Preference number: 2 (lower is better)
Translates to: SRSASLAREIRTRFSLRFLWKTC*RWVVGQ
Trigger: CTGACCCACTACCCACCTGCAACAAGTCTTCCAGAG...GAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp GGGCTGCTGGGAAGGCTGAGTCTTCTGTGTTCACCTGGAAGCAGACAGAAGCCTCTTGGTCCTGTGCAGTaGCAAACGCAGGTCCCGGAA +
Preference number: 2 (lower is better)
Translates to: GLLGRLSLLCSPGSRQKPLGPVQ*QTQVPE
Trigger: TTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAG...AGGCTTCTGTCTGCTTCCAGGTGAACACAGAAGACTCAGCCTTCCCAGCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp GCTGCTCCAATGACAAAGACAGGCATGAAGGCCCCACAGGGAACTGGGATGGTGTCCAGGCCTGTGAGGTaGTGGGTGGTTCTAGCTCCT +
Preference number: 2 (lower is better)
Translates to: AAPMTKTGMKAPQGTGMVSRPVR*WVVLAP
Trigger: AGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGA...CACCATCCCAGTTCCCTGTGGGGCCTTCATGCCTGTCTTTGTCATTGGAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475279.2
ENST00000636658.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR CCA 90 bp TTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTAGGATGTGGGCAATCTaGCCTGTGAGCTCGAACACG +
Preference number: 2 (lower is better)
Translates to: FQVRVTCQGDSDTLQLALRMWAI*PVSSNT
Trigger: CGTGTTCGAGCTCACAGGCCAGATTGCCCACATCCT...AAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp CCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCAGCAGAATCATGGCCTGTGAACGCTCGATaGAGCCCAGCAGAATCATGG +
Preference number: 2 (lower is better)
Translates to: PPTMPPPVNARWSPAESWPVNAR*SPAESW
Trigger: CCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGG...CCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp CACAGCGTAGCCCCCAGGCACAATCCGGTAGGTGCTGCTGTCCGTATGAATTCCCCTGTGAACGCTCGATaGAGCCCAGCAGAATCATGG +
Preference number: 2 (lower is better)
Translates to: HSVAPRHNPVGAAVRMNSPVNAR*SPAESW
Trigger: CCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGG...GGAATTCATACGGACAGCAGCACCTACCGGATTGTGCCTGGGGGCTACGCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR CCA 90 bp GCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTCTCACAGGATTGTCACTGCTGCTGGTaGCACTGTCTCGGAAGCTGG +
Preference number: 2 (lower is better)
Translates to: ASLAREIRTRFSLRFSQDCHCCW*HCLGSW
Trigger: CCAGCTTCCGAGACAGTGCCACCAGCAGCAGTGACA...ATCCTGTGAGAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp CAGGCAGCCATGCTTTCACCCACCAGACGCCCAAATGCTGCTCCAATGACAAAGTGGGTGGCCAAGGGCTaGGTGGCCTCGCATATCTCA +
Preference number: 2 (lower is better)
Translates to: QAAMLSPTRRPNAAPMTKWVAKG*VASHIS
Trigger: TGAGATATGCGAGGCCACCCAGCCCTTGGCCACCCA...CTTTGTCATTGGAGCAGCATTTGGGCGTCTGGTGGGTGAAAGCATGGCTGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475279.2
ENST00000636661.1
3UTR-3UTR CCA 90 bp CCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCAGCAGAATCATGGACCAACTCAAAGCAGCCTaGAGAGGAGCCGAGAGCCAC +
Preference number: 2 (lower is better)
Translates to: PNNATTCERSMEPSRIMDQLKAA*RGAESH
Trigger: GTGGCTCTCGGCTCCTCTCCAGGCTGCTTTGAGTTG...GTCCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636661.1
3UTR-3UTR TCA 90 bp CTGGTGACACTGGGCCCCCTCTTGAGTGCAGGCTTTAGGGGCTTGTGGGTCTCCGGAGGCCTTAGTCTTTaGTTCCCAAATGTCCTCTAC +
Preference number: 2 (lower is better)
Translates to: LVTLGPLLSAGFRGLWVSGGLSL*FPNVLY
Trigger: GTAGAGGACATTTGGGAATCAAAGACTAAGGCCTCC...GGAGACCCACAAGCCCCTAAAGCCTGCACTCAAGAGGGGGCCCAGTGTCACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636661.1
3UTR-3UTR TCA 90 bp GAACCAGGCAGCCATGCTTTCACCCACCAGACGCCCAAATGCTGCTCCAATGACAGAAGTCTACCTCGCTaGTCAGGTGGGCGTAACCCT +
Preference number: 2 (lower is better)
Translates to: EPGSHAFTHQTPKCCSNDRSLPR*SGGRNP
Trigger: AGGGTTACGCCCACCTGATCAGCGAGGTAGACTTCT...GTCATTGGAGCAGCATTTGGGCGTCTGGTGGGTGAAAGCATGGCTGCCTGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638134.1
3UTR-3UTR GCA 90 bp CCTTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCAGAAGGAATGAAAGATaGACATTCTGGGCTGACGGG +
Preference number: 2 (lower is better)
Translates to: PSRSASLAREIRTRFSLRRRNER*TFWADG
Trigger: CCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTCT...GCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp GCCACATGGGGAACATCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCCGATTGATGGTTTTCTaGTTCCGCATCACCTGGACA +
Preference number: 2 (lower is better)
Translates to: ATWGTSRTMMSSTRTRYCRLMVF*FRITWT
Trigger: TGTCCAGGTGATGCGGAAGCAGAAAACCATCAATCG...GCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGATGTTCCCCATGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636661.1
ENST00000638134.1
3UTR-3UTR GCA 90 bp CAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTCTCGCACAATCCGGTAGGTaGTGCTGTCCGTATGAATTC +
Preference number: 2 (lower is better)
Translates to: QVRVTCQGDSDTLQLALLAQSGR*CCPYEF
Trigger: GAATTCATACGGACAGCAGCACCTACCGGATTGTGC...GAGAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp TCGATGGCCTTCCGGAGCTCCTTTAGAGTAACGATTCCAATGAGTCTGCCAATAGTGTGTCACCGCTCCTaGCAGCGCAGCTGCCCCGAC +
Preference number: 2 (lower is better)
Translates to: SMAFRSSFRVTIPMSLPIVCHRS*QRSCPD
Trigger: GTCGGGGCAGCTGCGCTGGCAGGAGCGGTGACACAC...TATTGGCAGACTCATTGGAATCGTTACTCTAAAGGAGCTCCGGAAGGCCATCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp TCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTCCTATCTTCCTGCCTCTaGAAGACTTGTTGCAGGTGG +
Preference number: 2 (lower is better)
Translates to: SRSASLAREIRTRFSLRFLSSCL*KTCCRW
Trigger: CCACCTGCAACAAGTCTTCCAGAGGCAGGAAGATAG...GAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp TGGGAACCAGGCAGCCATGCTTTCACCCACCAGACGCCCAAATGCTGCTCCAATAGGATGTGGGCAATCTaGCCTGTGAGCTCGAACACG +
Preference number: 2 (lower is better)
Translates to: WEPGSHAFTHQTPKCCSNRMWAI*PVSSNT
Trigger: CGTGTTCGAGCTCACAGGCCAGATTGCCCACATCCT...ATTGGAGCAGCATTTGGGCGTCTGGTGGGTGAAAGCATGGCTGCCTGGTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR CCA 90 bp CAGGCAGCCATGCTTTCACCCACCAGACGCCCAAATGCTGCTCCAATGACAAAGCACAGGGAACTGGGATaGTGGTGGCCAGTGCAGACA +
Preference number: 2 (lower is better)
Translates to: QAAMLSPTRRPNAAPMTKHRELG*WWPVQT
Trigger: TGTCTGCACTGGCCACCACCATCCCAGTTCCCTGTG...CTTTGTCATTGGAGCAGCATTTGGGCGTCTGGTGGGTGAAAGCATGGCTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475279.2
ENST00000636658.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR CCA 90 bp TCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGGCTCATGTCAGAGCAGAGCCTTaGCTCTTTCATGAAAACACT +
Preference number: 2 (lower is better)
Translates to: SGLTGMASTILGHPRGAHVRAEP*LFHENT
Trigger: AGTGTTTTCATGAAAGAGCCAAGGCTCTGCTCTGAC...ATGAGCCCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636661.1
3UTR-3UTR TCA 90 bp ACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTCTCACAGGATTCCAAGGCTGCTGGGAAGGCTaGGTCTTCTGTGTTCACCTG +
Preference number: 2 (lower is better)
Translates to: TCQGDSDTLQLALLTGFQGCWEG*VFCVHL
Trigger: CAGGTGAACACAGAAGACTCAGCCTTCCCAGCAGCC...TTGGAATCCTGTGAGAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp CCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCAGCAGAATCATGGACCAGCGTCTCTTTCTGTaGGAGCTGTCCAGCCATGAA +
Preference number: 2 (lower is better)
Translates to: PNNATTCERSMEPSRIMDQRLFL*ELSSHE
Trigger: TTCATGGCTGGACAGCTCTCACAGAAAGAGACGCTG...GTCCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR TCA 90 bp GCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTCTCACAGGATGTGCTGCTGTCCGTATaGATTCCATCTGGGAACCAG +
Preference number: 2 (lower is better)
Translates to: ASLAREIRTRFSLRFSQDVLLSV*IPSGNQ
Trigger: CTGGTTCCCAGATGGAATTCATACGGACAGCAGCAC...ATCCTGTGAGAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp ACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCTTCCGGAGCTCCTTTCAGGGCCTATCTTCCTaGCTCTGGAAGACTTGTTGC +
Preference number: 2 (lower is better)
Translates to: TFTPCAVTEPSMAFRSSFQGLSS*LWKTCC
Trigger: GCAACAAGTCTTCCAGAGGCAGGAAGATAGGCCCTG...AAAGGAGCTCCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp GGGCCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCAGCAGAATCACGATTGATGGTTTTCTaGTTCCGCATCACCTGGACA +
Preference number: 2 (lower is better)
Translates to: GPPTMPPPVNARWSPAESRLMVF*FRITWT
Trigger: TGTCCAGGTGATGCGGAAGCAGAAAACCATCAATCG...TGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636180.1
ENST00000636661.1
3UTR-3UTR CCA 90 bp CCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCAGCAGAATCATGGACTCCTGTGAACGCTCGATaGAGCCCAGCAGAATCATGG +
Preference number: 2 (lower is better)
Translates to: PTMPPPVNARWSPAESWTPVNAR*SPAESW
Trigger: CCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGG...AGTCCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
3UTR CAA 90 bp ATCCAGAACTTCATGAGAATGAAGATGACCAGGGTGAGGAAGACGTaGGCACGTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCT +
Preference number: 2 (lower is better)
Translates to: IQNFMRMKMTRVRKT*ARGGFQACEVLGGS
Trigger: AGAACCACCCAGCACCTCACAGGCCTGGAACCCACCACGTGCCAACGTCTTCCTCACCCTGGTCATCTTCATTCTCATGAAGTTCTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636658.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp TCTGAAGGATGTCAGTCCCAAGGGAAGTCATGTCTCGCCCTCCCCACTCCCAATGTGCTGCTGTCCGTATaGATTCCATCTGGGAACCAG +
Preference number: 2 (lower is better)
Translates to: SEGCQSQGKSCLALPTPNVLLSV*IPSGNQ
Trigger: CTGGTTCCCAGATGGAATTCATACGGACAGCAGCAC...ATTGGGAGTGGGGAGGGCGAGACATGACTTCCCTTGGGACTGACATCCTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636661.1
3UTR-3UTR GCA 90 bp GCTGTGACAGAGCCCTCGATGGCCTTCCGGAGCTCCTTTAGAGTAACGATTCCACAGGGCCTATCTTCCTaGCTCTGGAAGACTTGTTGC +
Preference number: 2 (lower is better)
Translates to: AVTEPSMAFRSSFRVTIPQGLSS*LWKTCC
Trigger: GCAACAAGTCTTCCAGAGGCAGGAAGATAGGCCCTG...TGGAATCGTTACTCTAAAGGAGCTCCGGAAGGCCATCGAGGGCTCTGTCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR GCA 90 bp CTCCAGAATCTCTTCAGGGCTCATCTCGCCTTCCAGGTCCGCGTCACTTGCCAGCGATTGATGGTTTTCTaGTTCCGCATCACCTGGACA +
Preference number: 2 (lower is better)
Translates to: LQNLFRAHLAFQVRVTCQRLMVF*FRITWT
Trigger: TGTCCAGGTGATGCGGAAGCAGAAAACCATCAATCG...CTGGCAAGTGACGCGGACCTGGAAGGCGAGATGAGCCCTGAAGAGATTCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636180.1
ENST00000636661.1
3UTR-3UTR GCA 90 bp CAGCGTAGCCCCCAGGCACAATCCGGTAGGTGCTGCTGTCCGTATGAATTCCATCACCAGACGCCCAAATaGTGCTCCAATGACAAAGAC +
Preference number: 2 (lower is better)
Translates to: QRSPQAQSGRCCCPYEFHHQTPK*CSNDKD
Trigger: GTCTTTGTCATTGGAGCAGCATTTGGGCGTCTGGTG...ATGGAATTCATACGGACAGCAGCACCTACCGGATTGTGCCTGGGGGCTACGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000475279.2
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR GCA 90 bp GAACCAGGCAGCCATGCTTTCACCCACCAGACGCCCAAATGCTGCTCCAATGACGCACAATCCGGTAGGTaGTGCTGTCCGTATGAATTC +
Preference number: 2 (lower is better)
Translates to: EPGSHAFTHQTPKCCSNDAQSGR*CCPYEF
Trigger: GAATTCATACGGACAGCAGCACCTACCGGATTGTGC...GTCATTGGAGCAGCATTTGGGCGTCTGGTGGGTGAAAGCATGGCTGCCTGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475279.2
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR CCA 90 bp GGGCTCAGCTGGGCCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCATCTCTATATACATCTaGTCATTGGAGGTTCCAGTT +
Preference number: 2 (lower is better)
Translates to: GLSWAPNNATTCERSMEPISIYI*SLEVPV
Trigger: AACTGGAACCTCCAATGACCAGATGTATATAGAGAT...GGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGCTGAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp TGCTGGTGGCACTGTCTCGGAAGCTGGCGAGGGGCGGCCGGACTTTCACACCCTATCTCTATATACATCTaGTCATTGGAGGTTCCAGTT +
Preference number: 2 (lower is better)
Translates to: CWWHCLGSWRGAAGLSHPISIYI*SLEVPV
Trigger: AACTGGAACCTCCAATGACCAGATGTATATAGAGAT...AGGGTGTGAAAGTCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTGCCACCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp AAATGCTGCTCCAATGACAAAGACAGGCATGAAGGCCCCACAGGGAACTGGGATCCAGCATTCGGCCCTTaGTCCTGTGCAGTGCCAAAC +
Preference number: 2 (lower is better)
Translates to: KCCSNDKDRHEGPTGNWDPAFGP*SCAVPN
Trigger: GTTTGGCACTGCACAGGACCAAGGGCCGAATGCTGG...ATCCCAGTTCCCTGTGGGGCCTTCATGCCTGTCTTTGTCATTGGAGCAGCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR CCA 90 bp AAATGCTGCTCCAATGACAAAGACAGGCATGAAGGCCCCACAGGGAACTGGGATAGGCCTGTGAGGTGCTaGGTGGTTCTAGCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: KCCSNDKDRHEGPTGNWDRPVRC*VVLAPP
Trigger: TGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCT...ATCCCAGTTCCCTGTGGGGCCTTCATGCCTGTCTTTGTCATTGGAGCAGCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475279.2
ENST00000636658.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR CCA 90 bp GCCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCAGCAGAATCATGTCCCCTGACCTACTGTaGCCCTTATACAACTCAAAG +
Preference number: 2 (lower is better)
Translates to: APNNATTCERSMEPSRIMSPDLL*PLYNSK
Trigger: CTTTGAGTTGTATAAGGGCCACAGTAGGTCAGGGGA...CATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636661.1
3UTR-3UTR CCA 90 bp TCGATGGCCTTCCGGAGCTCCTTTAGAGTAACGATTCCAATGAGTCTGCCAATAGTGGAGAGGTCTGGGTaGCTCTGCGCTCCTGCATGT +
Preference number: 2 (lower is better)
Translates to: SMAFRSSFRVTIPMSLPIVERSG*LCAPAC
Trigger: ACATGCAGGAGCGCAGAGCCACCCAGACCTCTCCAC...TATTGGCAGACTCATTGGAATCGTTACTCTAAAGGAGCTCCGGAAGGCCATCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp TTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCTTCCGGAGCTCCTTTAGAAGTGAGAAGATAGTGTaGGTCTTGTGCAAAGAGGTC +
Preference number: 2 (lower is better)
Translates to: FTPCAVTEPSMAFRSSFRSEKIV*VLCKEV
Trigger: GACCTCTTTGCACAAGACTCACACTATCTTCTCACT...TCTAAAGGAGCTCCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp TCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTCTCACAGTTTGTCTCTCTGCAGTaGCTTAGAGTGAAGGTCAAT +
Preference number: 2 (lower is better)
Translates to: SASLAREIRTRFSLRFSQFVSLQ*LRVKVN
Trigger: ATTGACCTTCACTCTAAGTCACTGCAGAGAGACAAA...CTGTGAGAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636661.1
3UTR-3UTR GCA 90 bp ACGCCCAAATGCTGCTCCAATGACAAAGACAGGCATGAAGGCCCCACAGGGAACCGATTGATGGTTTTCTaGTTCCGCATCACCTGGACA +
Preference number: 2 (lower is better)
Translates to: TPKCCSNDKDRHEGPTGNRLMVF*FRITWT
Trigger: TGTCCAGGTGATGCGGAAGCAGAAAACCATCAATCG...GTTCCCTGTGGGGCCTTCATGCCTGTCTTTGTCATTGGAGCAGCATTTGGGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475279.2
ENST00000636661.1
ENST00000638134.1
3UTR-3UTR GCA 90 bp TCTGAAGGATGTCAGTCCCAAGGGAAGTCATGTCTCGCCCTCCCCACTCCCAATCAATCCGGTAGGTGCTaGTGTCCGTATGAATTCCAT +
Preference number: 2 (lower is better)
Translates to: SEGCQSQGKSCLALPTPNQSGRC*CPYEFH
Trigger: ATGGAATTCATACGGACAGCAGCACCTACCGGATTG...ATTGGGAGTGGGGAGGGCGAGACATGACTTCCCTTGGGACTGACATCCTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636661.1
3UTR-3UTR CCA 90 bp AGTAACGATTCCAATGAGTCTGCCAATACTGGTGACATAAGCATGGTCCACTCCTTTGGGAGGCCAAGGTaGGCAGACCTGAGGTCGGGA +
Preference number: 2 (lower is better)
Translates to: SNDSNESANTGDISMVHSFGRPR*ADLRSG
Trigger: TCCCGACCTCAGGTCTGCCCACCTTGGCCTCCCAAA...GGAGTGGACCATGCTTATGTCACCAGTATTGGCAGACTCATTGGAATCGTTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636661.1
3UTR CAA 90 bp GAGTTGTTATTCCACCCTCCACCCTCAGAAGCCCATCAGGGCATATaGTGTGATGGGGTGGAGAAGTTTCTGCCTCTCTTTGTCTCTCTG +
Preference number: 2 (lower is better)
Translates to: ELLFHPPPSEAHQGI*CDGVEKFLPLFVSL
Trigger: CAGAGAGACAAAGAGAGGCAGAAACTTCTCCACCCCATCACACAATATGCCCTGATGGGCTTCTGAGGGTGGAGGGTGGAATAACAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636661.1
3UTR-3UTR GCA 90 bp AGTAACGATTCCAATGAGTCTGCCAATACTGGTGACATAAGCATGGTCCACTCCCTTGGTCCTGTGCAGTaGCAAACGCAGGTCCCGGAA +
Preference number: 2 (lower is better)
Translates to: SNDSNESANTGDISMVHSLGPVQ*QTQVPE
Trigger: TTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAG...GGAGTGGACCATGCTTATGTCACCAGTATTGGCAGACTCATTGGAATCGTTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp AGTAACGATTCCAATGAGTCTGCCAATACTGGTGACATAAGCATGGTCCACTCCAGGCCTGTGAGGTGCTaGGTGGTTCTAGCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: SNDSNESANTGDISMVHSRPVRC*VVLAPP
Trigger: TGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCT...GGAGTGGACCATGCTTATGTCACCAGTATTGGCAGACTCATTGGAATCGTTACT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR CAA 90 bp TCCACCAGCTGGAAGGGAGCAGGATCAATTTTGCAGTCACTGAAGTaGACAGGTTCATCTAGTTGCTGCTCCTCCCACTCCAGAATCTCT +
Preference number: 2 (lower is better)
Translates to: STSWKGAGSILQSLK*TGSSSCCSSHSRIS
Trigger: AGAGATTCTGGAGTGGGAGGAGCAGCAACTAGATGAACCTGTCAACTTCAGTGACTGCAAAATTGATCCTGCTCCCTTCCAGCTGGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp ACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCTTCCGGAGCTCCTTTATCTCTATATACATCTaGTCATTGGAGGTTCCAGTT +
Preference number: 2 (lower is better)
Translates to: TFTPCAVTEPSMAFRSSFISIYI*SLEVPV
Trigger: AACTGGAACCTCCAATGACCAGATGTATATAGAGAT...AAAGGAGCTCCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000637909.1
3UTR-3UTR TCA 90 bp TCGATGGCCTTCCGGAGCTCCTTTAGAGTAACGATTCCAATGAGTCTGCCAATAGAAAACACTGCTGGCTaGTTTCTCAGTGAAGTGCCT +
Preference number: 2 (lower is better)
Translates to: SMAFRSSFRVTIPMSLPIENTAG*FLSEVP
Trigger: AGGCACTTCACTGAGAAATCAGCCAGCAGTGTTTTC...TATTGGCAGACTCATTGGAATCGTTACTCTAAAGGAGCTCCGGAAGGCCATCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636661.1
3UTR-3UTR GCA 90 bp TCGATGGCCTTCCGGAGCTCCTTTAGAGTAACGATTCCAATGAGTCTGCCAATACAATCCGGTAGGTGCTaGTGTCCGTATGAATTCCAT +
Preference number: 2 (lower is better)
Translates to: SMAFRSSFRVTIPMSLPIQSGRC*CPYEFH
Trigger: ATGGAATTCATACGGACAGCAGCACCTACCGGATTG...TATTGGCAGACTCATTGGAATCGTTACTCTAAAGGAGCTCCGGAAGGCCATCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CCA 90 bp TTAGTCTTTGATTCCCAAATGTCCTCTACCGCTGACTATAAACTTAAAAATGCCGTTTCACATCAGTCGTaGGTGGCCAAGGGCTGGGTG +
Preference number: 2 (lower is better)
Translates to: LVFDSQMSSTADYKLKNAVSHQS*VAKGWV
Trigger: CACCCAGCCCTTGGCCACCCACGACTGATGTGAAAC...GGCATTTTTAAGTTTATAGTCAGCGGTAGAGGACATTTGGGAATCAAAGACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636661.1
3UTR CCA 72 bp GGCTCTGCGCTCCTGCATGTGCTGCCGCCGGCGGGCTaGGCTCAGCTGGGCCCCCAACAATGCCACCACCTG +
Preference number: 3 (lower is better)
Translates to: GSALLHVLPPAG*AQLGPQQCHHL
Trigger: CAGGTGGTGGCATTGTTGGGGGCCCAGCTGAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR CAA 90 bp CCGTGTCACTGCTGCTGGTGGCACTGTCTCGGAAGCTGGCGAGGGGCGGCCGGACCAGGTCCGCGTCACTaGCCAGGGAGATTCGGACAC +
Preference number: 3 (lower is better)
Translates to: PCHCCWWHCLGSWRGAAGPGPRH*PGRFGH
Trigger: GTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGG...TCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTGCCACCAGCAGCAGTGACACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR GCA 72 bp CCTCCTGATCAGATAGTGGAGAGGTCTGGGTGGCTCTaGGCTCCTGCATGTGCTGCCGCCGGCGGGCTGGGC +
Preference number: 3 (lower is better)
Translates to: PPDQIVERSGWL*APACAAAGGLG
Trigger: GCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCACCCAGACCTCTCCACTATCTGATCAGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR GCA 72 bp GGGGTGGACTGCCACAGAAGAGGCTCCGGAGGGCGATaGCTGCCGACTCTGCGCTCCCTGTGGGACTCTCTC +
Preference number: 3 (lower is better)
Translates to: GVDCHRRGSGGR*LPTLRSLWDSL
Trigger: GAGAGAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTGGCAGTCCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR CCA 72 bp GGGGACCCTCCTGATCAGATAGTGGAGAGGTCTGGGTaGCTCTGCGCTCCTGCATGTGCTGCCGCCGGCGGG +
Preference number: 3 (lower is better)
Translates to: GDPPDQIVERSG*LCAPACAAAGG
Trigger: CCCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCACCCAGACCTCTCCACTATCTGATCAGGAGGGTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR CAA 90 bp AGGGGGTGGACTGCCACAGAAGAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCACACTGGGCCCCCTCTaGAGTGCAGGCTTTAGGGGC +
Preference number: 3 (lower is better)
Translates to: RGWTATEEAPEGDACRLCTLGPL*SAGFRG
Trigger: GCCCCTAAAGCCTGCACTCAAGAGGGGGCCCAGTGT...GCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTGGCAGTCCACCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR GCA 72 bp TGGACTGCCACAGAAGAGGCTCCGGAGGGCGATGCCTaGCGACTCTGCGCTCCCTGTGGGACTCTCTCCGAG +
Preference number: 3 (lower is better)
Translates to: WTATEEAPEGDA*RLCAPCGTLSE
Trigger: CTCGGAGAGAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTGGCAGTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR GCA 72 bp GAAGCTGGCGAGGGGCGGCCGGACTTTCACACCCTGTaGTGTGACAGAGCCCTCGATGGCCTTCCGGAGCTC +
Preference number: 3 (lower is better)
Translates to: EAGEGRPDFHTL*CDRALDGLPEL
Trigger: GAGCTCCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGGCCGCCCCTCGCCAGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR CCA 72 bp CCGTGTCACTGCTGCTGGTGGCACTGTCTCGGAAGCTaGCGAGGGGCGGCCGGACTTTCACACCCTGTGCTG +
Preference number: 3 (lower is better)
Translates to: PCHCCWWHCLGS*RGAAGLSHPVL
Trigger: CAGCACAGGGTGTGAAAGTCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTGCCACCAGCAGCAGTGACACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR CCA 72 bp GTGCATGCACCTCAGTGGTCTCCGTGTCACTGCTGCTaGTGGCACTGTCTCGGAAGCTGGCGAGGGGCGGCC +
Preference number: 3 (lower is better)
Translates to: VHAPQWSPCHCC*WHCLGSWRGAA
Trigger: GGCCGCCCCTCGCCAGCTTCCGAGACAGTGCCACCAGCAGCAGTGACACGGAGACCACTGAGGTGCATGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CAA 90 bp CTCCTCCACCAGGCCCTGGCGGACCCACGTCCGATTGTCAAACAGGGTGACCAGCTCTGGGCGACAGCGTaGGCCAGGATGACGGCGATC +
Preference number: 3 (lower is better)
Translates to: LLHQALADPRPIVKQGDQLWATA*ARMTAI
Trigger: GATCGCCGTCATCCTGGCCAACGCTGTCGCCCAGAG...CTGGTCACCCTGTTTGACAATCGGACGTGGGTCCGCCAGGGCCTGGTGGAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR CAA 90 bp GGCCAGCATTCGGCCCTTGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGTCTCTGGGCGACAGCGTaGGCCAGGATGACGGCGATC +
Preference number: 3 (lower is better)
Translates to: GQHSALGPVQCQTQVPEGLWATA*ARMTAI
Trigger: GATCGCCGTCATCCTGGCCAACGCTGTCGCCCAGAG...ACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGAATGCTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR CAA 90 bp TCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGGCTCATCTCTGGGCGACAGCGTaGGCCAGGATGACGGCGATC +
Preference number: 3 (lower is better)
Translates to: SGLTGMASTILGHPRGAHLWATA*ARMTAI
Trigger: GATCGCCGTCATCCTGGCCAACGCTGTCGCCCAGAG...ATGAGCCCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CAA 90 bp AGGGGGTGGACTGCCACAGAAGAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCCGGACCCACGTCCGATaGTCAAACAGGGTGACCAGC +
Preference number: 3 (lower is better)
Translates to: RGWTATEEAPEGDACRLCRTHVR*SNRVTS
Trigger: GCTGGTCACCCTGTTTGACAATCGGACGTGGGTCCG...GCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTGGCAGTCCACCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR TCA 72 bp CAGCCCACAGCGCCACCCAGGAGAAGTCTACCTCGCTaGTCAGGTGGGCGTAACCCTCCCAGCCACCCCGTA +
Preference number: 3 (lower is better)
Translates to: QPTAPPRRSLPR*SGGRNPPSHPV
Trigger: TACGGGGTGGCTGGGAGGGTTACGCCCACCTGATCAGCGAGGTAGACTTCTCCTGGGTGGCGCTGTGGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638134.1
3UTR-3UTR CAA 90 bp TCGGCCCTTGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGTGCAGCTGAGACACTGGGCCCCCTCTaGAGTGCAGGCTTTAGGGGC +
Preference number: 3 (lower is better)
Translates to: SALGPVQCQTQVPEGAAETLGPL*SAGFRG
Trigger: GCCCCTAAAGCCTGCACTCAAGAGGGGGCCCAGTGT...CTCAGCTGCACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR CAA 90 bp GCTGGGGTGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGACCAGGTCCGCGTCACTaGCCAGGGAGATTCGGACAC +
Preference number: 3 (lower is better)
Translates to: AGVQPPAVAASCLPKAEGPGPRH*PGRFGH
Trigger: GTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGG...TCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCACCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CAA 90 bp GGGCCCCCAGAGTGCATGCACCTCAGTGGTCTCCGTGTCACTGCTGCTGGTGGCAGGGTGAGGAAGACGTaGGCACGTGGTGGGTTCCAG +
Preference number: 3 (lower is better)
Translates to: GPPECMHLSGLRVTAAGGRVRKT*ARGGFQ
Trigger: CTGGAACCCACCACGTGCCAACGTCTTCCTCACCCT...GCCACCAGCAGCAGTGACACGGAGACCACTGAGGTGCATGCACTCTGGGGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR TCA 72 bp TGGCGAGGGGCGGCCGGACTTTCACACCCTGTGCTGTaGCAGAGCCCTCGATGGCCTTCCGGAGCTCCTTTA +
Preference number: 3 (lower is better)
Translates to: WRGAAGLSHPVL*QSPRWPSGAPL
Trigger: TAAAGGAGCTCCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGGCCGCCCCTCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR GCA 72 bp GACTCCACTAGGGCCAGCATTCGGCCCTTGGTCCTGTaGAGTGCCAAACGCAGGTCCCGGAAGGTGCAGCTG +
Preference number: 3 (lower is better)
Translates to: DSTRASIRPLVL*SAKRRSRKVQL
Trigger: CAGCTGCACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGAATGCTGGCCCTAGTGGAGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
3UTR GCA 72 bp AGAGTGCATGCACCTCAGTGGTCTCCGTGTCACTGCTaGTGGTGGCACTGTCTCGGAAGCTGGCGAGGGGCG +
Preference number: 3 (lower is better)
Translates to: RVHAPQWSPCHC*WWHCLGSWRGA
Trigger: CGCCCCTCGCCAGCTTCCGAGACAGTGCCACCAGCAGCAGTGACACGGAGACCACTGAGGTGCATGCACTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR CCA 72 bp GCTAGCACCATCCTAGGCCACCCACGAGGGGCTCATTaGCATTTGTCGTCGCTGTCGGAAGGGCTGCCCTCC +
Preference number: 3 (lower is better)
Translates to: ASTILGHPRGAH*HLSSLSEGLPS
Trigger: GGAGGGCAGCCCTTCCGACAGCGACGACAAATGCCAATGAGCCCCTCGTGGGTGGCCTAGGATGGTGCTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR CCA 72 bp GAGGTGCTGGGTGGTTCTAGCTCCTCCACCAGGCCCTaGCGGACCCACGTCCGATTGTCAAACAGGGTGACC +
Preference number: 3 (lower is better)
Translates to: EVLGGSSSSTRP*RTHVRLSNRVT
Trigger: GGTCACCCTGTTTGACAATCGGACGTGGGTCCGCCAGGGCCTGGTGGAGGAGCTAGAACCACCCAGCACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR CCA 72 bp GGGCCCCCAACAATGCCACCACCTGTGAACGCTCGATaGAGCCCAGCAGAATCATGGACTTGGTGGCGGCCC +
Preference number: 3 (lower is better)
Translates to: GPPTMPPPVNAR*SPAESWTWWRP
Trigger: GGGCCGCCACCAAGTCCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636180.1
3UTR-3UTR CAA 90 bp CTCTCTCCGAGGTTCCTGGTGACACTGGGCCCCCTCTTGAGTGCAGGCTTTAGGCTCTGGGCGACAGCGTaGGCCAGGATGACGGCGATC +
Preference number: 3 (lower is better)
Translates to: LSPRFLVTLGPLLSAGFRLWATA*ARMTAI
Trigger: GATCGCCGTCATCCTGGCCAACGCTGTCGCCCAGAG...CCTAAAGCCTGCACTCAAGAGGGGGCCCAGTGTCACCAGGAACCTCGGAGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR CAA 90 bp CTTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTCTCTGGGCGACAGCGTaGGCCAGGATGACGGCGATC +
Preference number: 3 (lower is better)
Translates to: LPGPRHLPGRFGHASACALWATA*ARMTAI
Trigger: GATCGCCGTCATCCTGGCCAACGCTGTCGCCCAGAG...AGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR CAA 90 bp CCCCGACCACAGCGTAGCCCCCAGGCACAATCCGGTAGGTGCTGCTGTCCGTATGCCAGCATTCGGCCCTaGGTCCTGTGCAGTGCCAAA +
Preference number: 3 (lower is better)
Translates to: PRPQRSPQAQSGRCCCPYASIRP*VLCSAK
Trigger: TTTGGCACTGCACAGGACCAAGGGCCGAATGCTGGC...ATACGGACAGCAGCACCTACCGGATTGTGCCTGGGGGCTACGCTGTGGTCGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR CAA 90 bp CTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGGCTCATTGGCATCCAGGTCCGCGTCACTaGCCAGGGAGATTCGGACAC +
Preference number: 3 (lower is better)
Translates to: LTGMASTILGHPRGAHWHPGPRH*PGRFGH
Trigger: GTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGG...ATGCCAATGAGCCCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CAA 90 bp CTGGTGACACTGGGCCCCCTCTTGAGTGCAGGCTTTAGGGGCTTGTGGGTCTCCCCAGGTCCGCGTCACTaGCCAGGGAGATTCGGACAC +
Preference number: 3 (lower is better)
Translates to: LVTLGPLLSAGFRGLWVSPGPRH*PGRFGH
Trigger: GTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGG...GGAGACCCACAAGCCCCTAAAGCCTGCACTCAAGAGGGGGCCCAGTGTCACCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR CAA 90 bp GGCCGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCTTCCGGAGCGGGGCTCATTGGCATTaGTCGTCGCTGTCGGAAGGG +
Preference number: 3 (lower is better)
Translates to: GRTFTPCAVTEPSMAFRSGAHWH*SSLSEG
Trigger: CCCTTCCGACAGCGACGACAAATGCCAATGAGCCCC...GCTCCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CAA 90 bp CATGACGGGAGTGGGGCCCCCAGAGTGCATGCACCTCAGTGGTCTCCGTGTCACCCCACGAGGGGCTCATaGGCATTTGTCGTCGCTGTC +
Preference number: 3 (lower is better)
Translates to: HDGSGAPRVHAPQWSPCHPTRGS*AFVVAV
Trigger: GACAGCGACGACAAATGCCAATGAGCCCCTCGTGGG...GTGACACGGAGACCACTGAGGTGCATGCACTCTGGGGGCCCCACTCCCGTCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CAA 90 bp ACGGGAGTGGGGCCCCCAGAGTGCATGCACCTCAGTGGTCTCCGTGTCACTGCTCGGACCCACGTCCGATaGTCAAACAGGGTGACCAGC +
Preference number: 3 (lower is better)
Translates to: TGVGPPECMHLSGLRVTARTHVR*SNRVTS
Trigger: GCTGGTCACCCTGTTTGACAATCGGACGTGGGTCCG...AGCAGTGACACGGAGACCACTGAGGTGCATGCACTCTGGGGGCCCCACTCCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CAA 90 bp CATGACGGGAGTGGGGCCCCCAGAGTGCATGCACCTCAGTGGTCTCCGTGTCACTTGGGGCCCTCCGAGTaGTTATTCCACCCTCCACCC +
Preference number: 3 (lower is better)
Translates to: HDGSGAPRVHAPQWSPCHLGPSE*LFHPPP
Trigger: GGGTGGAGGGTGGAATAACAACTCGGAGGGCCCCAA...GTGACACGGAGACCACTGAGGTGCATGCACTCTGGGGGCCCCACTCCCGTCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636661.1
3UTR-3UTR CAA 90 bp CCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCAGCAGAATCATGGCTCTGGGCGACAGCGTaGGCCAGGATGACGGCGATC +
Preference number: 3 (lower is better)
Translates to: PPTMPPPVNARWSPAESWLWATA*ARMTAI
Trigger: GATCGCCGTCATCCTGGCCAACGCTGTCGCCCAGAG...CCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR CAA 90 bp CTGGTGGCGGCCCCAGCCGAGCTCAGGCAGGTAGGGCAGTTTCTTGATTCGGATGCCAGCATTCGGCCCTaGGTCCTGTGCAGTGCCAAA +
Preference number: 3 (lower is better)
Translates to: LVAAPAELRQVGQFLDSDASIRP*VLCSAK
Trigger: TTTGGCACTGCACAGGACCAAGGGCCGAATGCTGGC...ATCCGAATCAAGAAACTGCCCTACCTGCCTGAGCTCGGCTGGGGCCGCCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR CAA 90 bp CTCTCTCCGAGGTTCCTGGTGACACTGGGCCCCCTCTTGAGTGCAGGCTTTAGGCCAGGTCCGCGTCACTaGCCAGGGAGATTCGGACAC +
Preference number: 3 (lower is better)
Translates to: LSPRFLVTLGPLLSAGFRPGPRH*PGRFGH
Trigger: GTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGG...CCTAAAGCCTGCACTCAAGAGGGGGCCCAGTGTCACCAGGAACCTCGGAGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR CAA 90 bp CTGGTGGCGGCCCCAGCCGAGCTCAGGCAGGTAGGGCAGTTTCTTGATTCGGATAGGGTGAGGAAGACGTaGGCACGTGGTGGGTTCCAG +
Preference number: 3 (lower is better)
Translates to: LVAAPAELRQVGQFLDSDRVRKT*ARGGFQ
Trigger: CTGGAACCCACCACGTGCCAACGTCTTCCTCACCCT...ATCCGAATCAAGAAACTGCCCTACCTGCCTGAGCTCGGCTGGGGCCGCCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR CCA 72 bp AAACGCAGGTCCCGGAAGGTGCAGCTGAGGGCCACATaGGGAACATCCCGCACCATGATGTCCTCCACACGC +
Preference number: 3 (lower is better)
Translates to: KRRSRKVQLRAT*GTSRTMMSSTR
Trigger: GCGTGTGGAGGACATCATGGTGCGGGATGTTCCCCATGTGGCCCTCAGCTGCACCTTCCGGGACCTGCGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
3UTR CCA 72 bp ACAGGATTCCAACTTCTCCGAAGCAGCCTCAGGGGGTaGACTGCCACAGAAGAGGCTCCGGAGGGCGATGCC +
Preference number: 3 (lower is better)
Translates to: TGFQLLRSSLRG*TATEEAPEGDA
Trigger: GGCATCGCCCTCCGGAGCCTCTTCTGTGGCAGTCCACCCCCTGAGGCTGCTTCGGAGAAGTTGGAATCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR CAA 90 bp CTGGTGACACTGGGCCCCCTCTTGAGTGCAGGCTTTAGGGGCTTGTGGGTCTCCCTGCCTCTGGAAGACTaGTTGCAGGTGGGTAGTGGG +
Preference number: 3 (lower is better)
Translates to: LVTLGPLLSAGFRGLWVSLPLED*LQVGSG
Trigger: CCCACTACCCACCTGCAACAAGTCTTCCAGAGGCAG...GGAGACCCACAAGCCCCTAAAGCCTGCACTCAAGAGGGGGCCCAGTGTCACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CAA 90 bp CTGGTGACACTGGGCCCCCTCTTGAGTGCAGGCTTTAGGGGCTTGTGGGTCTCCCGGACACGCTTCAGCTaGCGCTTCTCACAGGATTCC +
Preference number: 3 (lower is better)
Translates to: LVTLGPLLSAGFRGLWVSRTRFS*RFSQDS
Trigger: GGAATCCTGTGAGAAGCGCAAGCTGAAGCGTGTCCG...GGAGACCCACAAGCCCCTAAAGCCTGCACTCAAGAGGGGGCCCAGTGTCACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR TCA 72 bp TGGGCTCAGCTGGGCCCCCAACAATGCCACCACCTGTaGACGCTCGATGGAGCCCAGCAGAATCATGGACTC +
Preference number: 3 (lower is better)
Translates to: WAQLGPQQCHHL*TLDGAQQNHGL
Trigger: GAGTCCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGCTGAGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR TCA 72 bp GGCCCTGGCGGACCCACGTCCGATTGTCAAACAGGGTaGCCAGCGTCTCTTTCTGTGAGAGCTGTCCAGCCA +
Preference number: 3 (lower is better)
Translates to: GPGGPTSDCQTG*PASLSVRAVQP
Trigger: TGGCTGGACAGCTCTCACAGAAAGAGACGCTGGTCACCCTGTTTGACAATCGGACGTGGGTCCGCCAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR TCA 72 bp CTGGTCCATTCCCTTTGGAACCAAGGAGACTGGTCCTaGGCTCCCTGCCCCTTCCCGAAGCTTCGACCCTGG +
Preference number: 3 (lower is better)
Translates to: LVHSLWNQGDWS*APCPFPKLRPW
Trigger: CCAGGGTCGAAGCTTCGGGAAGGGGCAGGGAGCTCAGGACCAGTCTCCTTGGTTCCAAAGGGAATGGACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636241.1
ENST00000636661.1
3UTR CCA 72 bp GGGCCCCCAACAATGCCACCACCTGTGAACGCTCGATaGAGCCCAGCAGAATCATGGACTCAGGGGACTCCA +
Preference number: 3 (lower is better)
Translates to: GPPTMPPPVNAR*SPAESWTQGTP
Trigger: TGGAGTCCCCTGAGTCCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430397.5
ENST00000637538.1
ENST00000637909.1
3UTR-3UTR CAA 90 bp CCCAAATGCTGCTCCAATGACAAAGACAGGCATGAAGGCCCCACAGGGAACTGGCTCTGGGCGACAGCGTaGGCCAGGATGACGGCGATC +
Preference number: 3 (lower is better)
Translates to: PKCCSNDKDRHEGPTGNWLWATA*ARMTAI
Trigger: GATCGCCGTCATCCTGGCCAACGCTGTCGCCCAGAG...CCAGTTCCCTGTGGGGCCTTCATGCCTGTCTTTGTCATTGGAGCAGCATTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR CAA 90 bp AGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTCTCACGGACCCACGTCCGATaGTCAAACAGGGTGACCAGC +
Preference number: 3 (lower is better)
Translates to: RSASLAREIRTRFSLRFSRTHVR*SNRVTS
Trigger: GCTGGTCACCCTGTTTGACAATCGGACGTGGGTCCG...TGAGAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CAA 90 bp CTGGGCTCAGCTGGGCCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCAGTGAAGTGCCTGTTTaGACTGGGCCATTCTCTCCC +
Preference number: 3 (lower is better)
Translates to: LGSAGPPTMPPPVNARWSSEVPV*TGPFSP
Trigger: GGGAGAGAATGGCCCAGTCAAAACAGGCACTTCACT...GCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGCTGAGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636661.1
3UTR TCA 72 bp TGGGCTCAGCTGGGCCCCCAACAATGCCACCACCTGTaGACGCTCGATGGAGCCCAGCAGAATCATGGACTT +
Preference number: 3 (lower is better)
Translates to: WAQLGPQQCHHL*TLDGAQQNHGL
Trigger: AAGTCCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGCTGAGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636180.1
3UTR TCA 72 bp GCCTTTCCCATGGCACTGTGGAGAGGCTTCGAGGAGTaGGCACTGCGTGGCAGGTGCTTAGAAGGGCAAGCT +
Preference number: 3 (lower is better)
Translates to: AFPMALWRGFEE*ALRGRCLEGQA
Trigger: AGCTTGCCCTTCTAAGCACCTGCCACGCAGTGCTCACTCCTCGAAGCCTCTCCACAGTGCCATGGGAAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638134.1
3UTR GCA 72 bp CCACAGCGTAGCCCCCAGGCACAATCCGGTAGGTGCTaGTGTCCGTATGAATTCCATCTGGGAACCAGGCAG +
Preference number: 3 (lower is better)
Translates to: PQRSPQAQSGRC*CPYEFHLGTRQ
Trigger: CTGCCTGGTTCCCAGATGGAATTCATACGGACAGCAGCACCTACCGGATTGTGCCTGGGGGCTACGCTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR GCA 72 bp CGACCACAGCGTAGCCCCCAGGCACAATCCGGTAGGTaGTGCTGTCCGTATGAATTCCATCTGGGAACCAGG +
Preference number: 3 (lower is better)
Translates to: RPQRSPQAQSGR*CCPYEFHLGTR
Trigger: CCTGGTTCCCAGATGGAATTCATACGGACAGCAGCACCTACCGGATTGTGCCTGGGGGCTACGCTGTGGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR GCA 72 bp GGGGAAGCTGGGGTCACTTGTAAAGTTGACCAGAGGTaGGTAGGGAGCAGGTTCAGCTGGCTGCCCTCTCTC +
Preference number: 3 (lower is better)
Translates to: GEAGVTCKVDQR*VGSRFSWLPSL
Trigger: GAGAGAGGGCAGCCAGCTGAACCTGCTCCCTACGCACCTCTGGTCAACTTTACAAGTGACCCCAGCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636661.1
3UTR GCA 72 bp AGGCCACACACCAGAGGGAAGCCCCCACCTGGCAAGTaGTGGTCCATTCCCTTTGGAACCAAGGAGACTGGT +
Preference number: 3 (lower is better)
Translates to: RPHTRGKPPPGK*WSIPFGTKETG
Trigger: ACCAGTCTCCTTGGTTCCAAAGGGAATGGACCAGCACTTGCCAGGTGGGGGCTTCCCTCTGGTGTGTGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636241.1
3UTR-3UTR CAA 90 bp TGTGAGTCTCTTCAGGGCTCATCTCGCCTTCCAGGTCCGCGTCACTTGCCAGGGCCTCTGGAAGACTTGTaGCAGGTGGGTAGTGGGTCA +
Preference number: 3 (lower is better)
Translates to: CESLQGSSRLPGPRHLPGPLEDL*QVGSGS
Trigger: TGACCCACTACCCACCTGCAACAAGTCTTCCAGAGG...CCCTGGCAAGTGACGCGGACCTGGAAGGCGAGATGAGCCCTGAAGAGACTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430397.5
3UTR-3UTR CAA 90 bp GGCAAGTGCTGGTCCATTCCCTTTGGAACCAAGGAGACTGGTCCTGAGCTCCCTGCCAGCATTCGGCCCTaGGTCCTGTGCAGTGCCAAA +
Preference number: 3 (lower is better)
Translates to: GKCWSIPFGTKETGPELPASIRP*VLCSAK
Trigger: TTTGGCACTGCACAGGACCAAGGGCCGAATGCTGGC...AGGGAGCTCAGGACCAGTCTCCTTGGTTCCAAAGGGAATGGACCAGCACTTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636241.1
ENST00000636661.1
3UTR-3UTR CAA 90 bp TTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCTTCCGGAGCTCCTTTAGAGGGGCTCATTGGCATTaGTCGTCGCTGTCGGAAGGG +
Preference number: 3 (lower is better)
Translates to: FTPCAVTEPSMAFRSSFRGAHWH*SSLSEG
Trigger: CCCTTCCGACAGCGACGACAAATGCCAATGAGCCCC...TCTAAAGGAGCTCCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CAA 90 bp CCACAGCGTAGCCCCCAGGCACAATCCGGTAGGTGCTGCTGTCCGTATGAATTCCCTCTGGAAGACTTGTaGCAGGTGGGTAGTGGGTCA +
Preference number: 3 (lower is better)
Translates to: PQRSPQAQSGRCCCPYEFPLEDL*QVGSGS
Trigger: TGACCCACTACCCACCTGCAACAAGTCTTCCAGAGG...GAATTCATACGGACAGCAGCACCTACCGGATTGTGCCTGGGGGCTACGCTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CAA 90 bp GGCTCATCTCGCCTTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTCTCATGAGGAAGCGATaGATGGTTTTCTGCTTCCGC +
Preference number: 3 (lower is better)
Translates to: GSSRLPGPRHLPGRFGHALMRKR*MVFCFR
Trigger: GCGGAAGCAGAAAACCATCAATCGCTTCCTCATGAG...AGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAAGGCGAGATGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636180.1
ENST00000636661.1
3UTR-3UTR CAA 90 bp GCACAATCCGGTAGGTGCTGCTGTCCGTATGAATTCCATCTGGGAACCAGGCAGCGGACCCACGTCCGATaGTCAAACAGGGTGACCAGC +
Preference number: 3 (lower is better)
Translates to: AQSGRCCCPYEFHLGTRQRTHVR*SNRVTS
Trigger: GCTGGTCACCCTGTTTGACAATCGGACGTGGGTCCG...CTGCCTGGTTCCCAGATGGAATTCATACGGACAGCAGCACCTACCGGATTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR-3UTR CAA 90 bp ACATCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCTGGTGGCGGCCCTTGCAGTCACTGAAGTaGACAGGTTCATCTAGTTGC +
Preference number: 3 (lower is better)
Translates to: TSRTMMSSTRTRYCWWRPLQSLK*TGSSSC
Trigger: GCAACTAGATGAACCTGTCAACTTCAGTGACTGCAA...GGGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636661.1
ENST00000637909.1
3UTR TCA 72 bp TGCGTAGGGAGCAGGTTCAGCTGGCTGCCCTCTCTCTaGAGGATGTCAGTCCCAAGGGAAGTCATGTCTCGC +
Preference number: 3 (lower is better)
Translates to: CVGSRFSWLPSL*RMSVPREVMSR
Trigger: GCGAGACATGACTTCCCTTGGGACTGACATCCTTCAGAGAGAGGGCAGCCAGCTGAACCTGCTCCCTACGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636661.1
3UTR-3UTR CAA 90 bp GGGCTGCTGGGAAGGCTGAGTCTTCTGTGTTCACCTGGAAGCAGACAGAAGCCTCCTCTGGAAGACTTGTaGCAGGTGGGTAGTGGGTCA +
Preference number: 3 (lower is better)
Translates to: GLLGRLSLLCSPGSRQKPPLEDL*QVGSGS
Trigger: TGACCCACTACCCACCTGCAACAAGTCTTCCAGAGG...AGGCTTCTGTCTGCTTCCAGGTGAACACAGAAGACTCAGCCTTCCCAGCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CAA 90 bp CTTCGAGGAGTGAGCACTGCGTGGCAGGTGCTTAGAAGGGCAAGCTATGTAAAGGCCAGCATTCGGCCCTaGGTCCTGTGCAGTGCCAAA +
Preference number: 3 (lower is better)
Translates to: LRGVSTAWQVLRRASYVKASIRP*VLCSAK
Trigger: TTTGGCACTGCACAGGACCAAGGGCCGAATGCTGGC...CTTTACATAGCTTGCCCTTCTAAGCACCTGCCACGCAGTGCTCACTCCTCGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638134.1
3UTR-3UTR CAA 90 bp AGACGTTGGCACGTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCTCATGAGGAAGCGATaGATGGTTTTCTGCTTCCGC +
Preference number: 3 (lower is better)
Translates to: RRWHVVGSRPVRCWVVLALMRKR*MVFCFR
Trigger: GCGGAAGCAGAAAACCATCAATCGCTTCCTCATGAG...AGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACCACGTGCCAACGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636661.1
ENST00000638134.1
3UTR-3UTR CAA 90 bp TCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGGCTCATAGTTTCTGCCTCTCTTaGTCTCTCTGCAGTGACTTA +
Preference number: 3 (lower is better)
Translates to: SGLTGMASTILGHPRGAHSFCLS*SLCSDL
Trigger: TAAGTCACTGCAGAGAGACAAAGAGAGGCAGAAACT...ATGAGCCCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636661.1
3UTR CCA 72 bp TTGGCCAGGATGACGGCGATCATGACAGGCAGGATGTaGGCAATCTGGCCTGTGAGCTCGAACACGATCACA +
Preference number: 3 (lower is better)
Translates to: LARMTAIMTGRM*AIWPVSSNTIT
Trigger: TGTGATCGTGTTCGAGCTCACAGGCCAGATTGCCCACATCCTGCCTGTCATGATCGCCGTCATCCTGGCCAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
3UTR CCA 72 bp CCAGGTGATGGCAAGGGGAAGGACTCTGGAAGCAGATaGCTTGGGTTCAGATCATCGCTCTGCCCTCTAGCT +
Preference number: 3 (lower is better)
Translates to: PGDGKGKDSGSR*LGFRSSLCPLA
Trigger: AGCTAGAGGGCAGAGCGATGATCTGAACCCAAGCCATCTGCTTCCAGAGTCCTTCCCCTTGCCATCACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638134.1
3UTR CCA 72 bp CCACCTGTGAACGCTCGATGGAGCCCAGCAGAATCATaGACTCTGGACAGAACAGGTGGAAGGACTCAGGAG +
Preference number: 3 (lower is better)
Translates to: PPVNARWSPAES*TLDRTGGRTQE
Trigger: CTCCTGAGTCCTTCCACCTGTTCTGTCCAGAGTCCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636241.1
3UTR-3UTR CAA 90 bp GCTGTGACAGAGCCCTCGATGGCCTTCCGGAGCTCCTTTAGAGTAACGATTCCACCTCTGGAAGACTTGTaGCAGGTGGGTAGTGGGTCA +
Preference number: 3 (lower is better)
Translates to: AVTEPSMAFRSSFRVTIPPLEDL*QVGSGS
Trigger: TGACCCACTACCCACCTGCAACAAGTCTTCCAGAGG...TGGAATCGTTACTCTAAAGGAGCTCCGGAAGGCCATCGAGGGCTCTGTCACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CAA 90 bp TCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCTGGTGGCGGCCCCAGATATACATCTGGTCATaGGAGGTTCCAGTTATAAAC +
Preference number: 3 (lower is better)
Translates to: SRTMMSSTRTRYCWWRPQIYIWS*EVPVIN
Trigger: GTTTATAACTGGAACCTCCAATGACCAGATGTATAT...CTGGGGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637909.1
3UTR-3UTR CAA 90 bp CACAGCGTAGCCCCCAGGCACAATCCGGTAGGTGCTGCTGTCCGTATGAATTCCCTCATGAGGAAGCGATaGATGGTTTTCTGCTTCCGC +
Preference number: 3 (lower is better)
Translates to: HSVAPRHNPVGAAVRMNSLMRKR*MVFCFR
Trigger: GCGGAAGCAGAAAACCATCAATCGCTTCCTCATGAG...GGAATTCATACGGACAGCAGCACCTACCGGATTGTGCCTGGGGGCTACGCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636661.1
ENST00000638134.1
3UTR-3UTR CAA 90 bp AAATGCTGCTCCAATGACAAAGACAGGCATGAAGGCCCCACAGGGAACTGGGATCGGACCCACGTCCGATaGTCAAACAGGGTGACCAGC +
Preference number: 3 (lower is better)
Translates to: KCCSNDKDRHEGPTGNWDRTHVR*SNRVTS
Trigger: GCTGGTCACCCTGTTTGACAATCGGACGTGGGTCCG...ATCCCAGTTCCCTGTGGGGCCTTCATGCCTGTCTTTGTCATTGGAGCAGCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475279.2
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR GCA 72 bp CGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTaGGCTTCTCACAGGATTCCAACTTCTCCGAAGCAG +
Preference number: 3 (lower is better)
Translates to: RHLPGRFGHASA*ASHRIPTSPKQ
Trigger: CTGCTTCGGAGAAGTTGGAATCCTGTGAGAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR CCA 72 bp GCCATTCTCTCCCCATCACTGTCCCCTGACCTACTGTaGCCCTTATACAACTCAAAGCAGCCTGGAGAGGAG +
Preference number: 3 (lower is better)
Translates to: AILSPSLSPDLL*PLYNSKQPGEE
Trigger: CTCCTCTCCAGGCTGCTTTGAGTTGTATAAGGGCCACAGTAGGTCAGGGGACAGTGATGGGGAGAGAATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636661.1
3UTR CCA 72 bp GGCACTGTGGAGAGGCTTCGAGGAGTGAGCACTGCGTaGCAGGTGCTTAGAAGGGCAAGCTATGTAAAGGTT +
Preference number: 3 (lower is better)
Translates to: GTVERLRGVSTA*QVLRRASYVKV
Trigger: AACCTTTACATAGCTTGCCCTTCTAAGCACCTGCCACGCAGTGCTCACTCCTCGAAGCCTCTCCACAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638134.1
3UTR GCA 72 bp TGTCCGTATGAATTCCATCTGGGAACCAGGCAGCCATaGTTTCACCCACCAGACGCCCAAATGCTGCTCCAA +
Preference number: 3 (lower is better)
Translates to: CPYEFHLGTRQP*FHPPDAQMLLQ
Trigger: TTGGAGCAGCATTTGGGCGTCTGGTGGGTGAAAGCATGGCTGCCTGGTTCCCAGATGGAATTCATACGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475279.2
ENST00000636658.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR GCA 72 bp TGTCCGTATGAATTCCATCTGGGAACCAGGCAGCCATaGTTTCACCCACCAGACGCCCAAATGCTGCTCCTT +
Preference number: 3 (lower is better)
Translates to: CPYEFHLGTRQP*FHPPDAQMLLL
Trigger: AAGGAGCAGCATTTGGGCGTCTGGTGGGTGAAAGCATGGCTGCCTGGTTCCCAGATGGAATTCATACGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636180.1
3UTR TCA 72 bp CACTCAGTCCTGACAGAAGGTCTCCTTTGCTGTTTATaGTACGATAGCCCCAAGGCTGATGGTGGACTGGGG +
Preference number: 3 (lower is better)
Translates to: HSVLTEGLLCCL*YDSPKADGGLG
Trigger: CCCCAGTCCACCATCAGCCTTGGGGCTATCGTATCATAAACAGCAAAGGAGACCTTCTGTCAGGACTGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636661.1
3UTR-3UTR CAA 90 bp ATGCTTTCACCCACCAGACGCCCAAATGCTGCTCCAATGACAAAGACAGGCATGCTCATGAGGAAGCGATaGATGGTTTTCTGCTTCCGC +
Preference number: 3 (lower is better)
Translates to: MLSPTRRPNAAPMTKTGMLMRKR*MVFCFR
Trigger: GCGGAAGCAGAAAACCATCAATCGCTTCCTCATGAG...CATGCCTGTCTTTGTCATTGGAGCAGCATTTGGGCGTCTGGTGGGTGAAAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475279.2
ENST00000636661.1
ENST00000638134.1
3UTR CCA 72 bp GTTTATGATACGATAGCCCCAAGGCTGATGGTGGACTaGGGTTATTCTAAGAGCAGGGGTCTGACCCAAAGA +
Preference number: 3 (lower is better)
Translates to: VYDTIAPRLMVD*GYSKSRGLTQR
Trigger: TCTTTGGGTCAGACCCCTGCTCTTAGAATAACCCCAGTCCACCATCAGCCTTGGGGCTATCGTATCATAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636661.1
3UTR TCA 72 bp GCAGAGCCTTGGCTCTTTCATGAAAACACTCAGTCCTaGCAGAAGGTCTCCTTTGCTGTTTATGATACGATA +
Preference number: 3 (lower is better)
Translates to: AEPWLFHENTQS*QKVSFAVYDTI
Trigger: TATCGTATCATAAACAGCAAAGGAGACCTTCTGTCAGGACTGAGTGTTTTCATGAAAGAGCCAAGGCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636661.1
CDS-3UTR GCA 90 bp TGGGTGGCTCTGCGCTCCTGCATGTGCTGCCGCCGGCGGGCTGGGCTCAGCTGGGTGGCTCTGCGCTCCTaGATGTGCTGCCGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: WVALRSCMCCRRRAGLSWVALRS*MCCRRR
Trigger: CCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCAC...CCAGCTGAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCACCCA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR GCA 90 bp TGGAGAGGTCTGGGTGGCTCTGCGCTCCTGCATGTGCTGCCGCCGGCGGGCTGGGTGTGTCACCGCTCCTaGCAGCGCAGCTGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: WRGLGGSALLHVLPPAGWVCHRS*QRSCPD
Trigger: GTCGGGGCAGCTGCGCTGGCAGGAGCGGTGACACAC...CCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCACCCAGACCTCTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR GCA 90 bp TTTGTCGTCGCTGTCGGAAGGGCTGCCCTCCCGGGGGAGGCCATGACGGGAGTGCTGCGCTCCTGCATGTaGTGCCGCCGGCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: FVVAVGRAALPGEAMTGVLRSCM*CRRRAG
Trigger: CCCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAG...CACTCCCGTCATGGCCTCCCCCGGGAGGGCAGCCCTTCCGACAGCGACGACAAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CAGAAGAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGACTCCTGCGCTCCTGCATGTaGTGCCGCCGGCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QKRLRRAMPADSALPVGLLRSCM*CRRRAG
Trigger: CCCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAG...GAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGACTCTCTCCGAGGGGCTCCGGAGGGCGATaGCTGCCGACTCTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: LRRAMPADSALPVGLSPRGSGGR*LPTLRS
Trigger: GGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCC...CCTCGGAGAGAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR TCA 90 bp GAGAGGTCTGGGTGGCTCTGCGCTCCTGCATGTGCTGCCGCCGGCGGGCTGGGCCCCGGAAGGTGCAGCTaGGGGCCACATGGGGAACAT +
Preference number: 4 (lower is better)
Translates to: ERSGWLCAPACAAAGGLGPGRCS*GPHGEH
Trigger: ATGTTCCCCATGTGGCCCTCAGCTGCACCTTCCGGG...GCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCACCCAGACCTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR GCA 90 bp ACATCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCTGGTGGCGGCCCCGCTCCTGCATGTGCTaGCGCCGGCGGGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: TSRTMMSSTRTRYCWWRPRSCMC*RRRAGL
Trigger: GAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCG...GGGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGATGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GGGCCCCCAGAGTGCATGCACCTCAGTGGTCTCCGTGTCACTGCTGCTGGTGGCCGCACCCGGTACTGCTaGTGGCGGCCCCAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: GPPECMHLSGLRVTAAGGRTRYC*WRPQPS
Trigger: GCTCGGCTGGGGCCGCCACCAGCAGTACCGGGTGCG...GCCACCAGCAGCAGTGACACGGAGACCACTGAGGTGCATGCACTCTGGGGGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp TGCTGGTGGCACTGTCTCGGAAGCTGGCGAGGGGCGGCCGGACTTTCACACCCTCGCACCCGGTACTGCTaGTGGCGGCCCCAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: CWWHCLGSWRGAAGLSHPRTRYC*WRPQPS
Trigger: GCTCGGCTGGGGCCGCCACCAGCAGTACCGGGTGCG...AGGGTGTGAAAGTCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTGCCACCAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp TGGGTGGCTCTGCGCTCCTGCATGTGCTGCCGCCGGCGGGCTGGGCTCAGCTGGGAACATCCCGCACCATaGTGTCCTCCACACGCACCC +
Preference number: 4 (lower is better)
Translates to: WVALRSCMCCRRRAGLSWEHPAP*CPPHAP
Trigger: GGGTGCGTGTGGAGGACATCATGGTGCGGGATGTTC...CCAGCTGAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCACCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR TCA 90 bp GAGGTCTGGGTGGCTCTGCGCTCCTGCATGTGCTGCCGCCGGCGGGCTGGGCTCCAATGCCACCACCTGTaGACGCTCGATGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: EVWVALRSCMCCRRRAGLQCHHL*TLDGAQ
Trigger: CTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTG...GAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCACCCAGACCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR TCA 90 bp GAGGTCTGGGTGGCTCTGCGCTCCTGCATGTGCTGCCGCCGGCGGGCTGGGCTCTCACACCCTGTGCTGTaGCAGAGCCCTCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: EVWVALRSCMCCRRRAGLSHPVL*QSPRWP
Trigger: AGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGA...GAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCACCCAGACCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp GGGGTGGACTGCCACAGAAGAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCCAAGGAGACTGGTCCTaGGCTCCCTGCCCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: GVDCHRRGSGGRCLPTLRQGDWS*APCPFP
Trigger: CGGGAAGGGGCAGGGAGCTCAGGACCAGTCTCCTTG...GCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTGGCAGTCCACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636661.1
CDS-3UTR GCA 90 bp GTCTGGGTGGCTCTGCGCTCCTGCATGTGCTGCCGCCGGCGGGCTGGGCTCAGCGGAACCAGGCAGCCATaGTTTCACCCACCAGACGCC +
Preference number: 4 (lower is better)
Translates to: VWVALRSCMCCRRRAGLSGTRQP*FHPPDA
Trigger: GGCGTCTGGTGGGTGAAAGCATGGCTGCCTGGTTCC...GCTGAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCACCCAGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGCGCTCCTGCATGTGCTaGCGCCGGCGGGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: AHSGLTGMASTILGHPRGRSCMC*RRRAGL
Trigger: GAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCG...CCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GGGCTGCAGACTCTGGGCGACAGCGTTGGCCAGGATGACGGCGATCATGACAGGCGCTCCTGCATGTGCTaGCGCCGGCGGGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: GLQTLGDSVGQDDGDHDRRSCMC*RRRAGL
Trigger: GAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCG...CCTGTCATGATCGCCGTCATCCTGGCCAACGCTGTCGCCCAGAGTCTGCAGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGCTGCGCTCCTGCATGTaGTGCCGCCGGCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: AHSGLTGMASTILGHPRGLRSCM*CRRRAG
Trigger: CCCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAG...CCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GGGCCAGCATTCGGCCCTTGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGGTGGCTCTGCGCTCCTaGATGTGCTGCCGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: GPAFGPWSCAVPNAGPGRVALRS*MCCRRR
Trigger: CCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCAC...CCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGAATGCTGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GAAGCTGGCGAGGGGCGGCCGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCCGCTGTCGGAAGGGCTaGCCTCCCGGGGGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: EAGEGRPDFHTLCCDRALRCRKG*PPGGGH
Trigger: ATGGCCTCCCCCGGGAGGGCAGCCCTTCCGACAGCG...GAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGGCCGCCCCTCGCCAGCTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp TCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCTGGTGGCGGCCCCAGACCCGGTACTGCTGGTaGCGGCCCCAGCCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SRTMMSSTRTRYCWWRPQTRYCW*RPQPSS
Trigger: TGAGCTCGGCTGGGGCCGCCACCAGCAGTACCGGGT...CTGGGGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp AGGGGGTGGACTGCCACAGAAGAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCACCCGGTACTGCTGGTaGCGGCCCCAGCCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: RGWTATEEAPEGDACRLCTRYCW*RPQPSS
Trigger: TGAGCTCGGCTGGGGCCGCCACCAGCAGTACCGGGT...GCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTGGCAGTCCACCCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR CCA 90 bp CCTCACCAGGGGACTCCACTAGGGCCAGCATTCGGCCCTTGGTCCTGTGCAGTGCGCACCCGGTACTGCTaGTGGCGGCCCCAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: PHQGTPLGPAFGPWSCAVRTRYC*WRPQPS
Trigger: GCTCGGCTGGGGCCGCCACCAGCAGTACCGGGTGCG...CACTGCACAGGACCAAGGGCCGAATGCTGGCCCTAGTGGAGTCCCCTGGTGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636241.1
ENST00000636661.1
CDS-3UTR CCA 90 bp TGGGTGGCTCTGCGCTCCTGCATGTGCTGCCGCCGGCGGGCTGGGCTCAGCTGGTGGGTGGCCAAGGGCTaGGTGGCCTCGCATATCTCA +
Preference number: 4 (lower is better)
Translates to: WVALRSCMCCRRRAGLSWWVAKG*VASHIS
Trigger: TGAGATATGCGAGGCCACCCAGCCCTTGGCCACCCA...CCAGCTGAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCACCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636661.1
CDS-3UTR CCA 90 bp GTCTGGGTGGCTCTGCGCTCCTGCATGTGCTGCCGCCGGCGGGCTGGGCTCAGCCCGAAGCTTCGACCCTaGGCAATGCCCCTAGCACCT +
Preference number: 4 (lower is better)
Translates to: VWVALRSCMCCRRRAGLSPKLRP*AMPLAP
Trigger: AGGTGCTAGGGGCATTGCCCAGGGTCGAAGCTTCGG...GCTGAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCACCCAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636661.1
CDS-3UTR TCA 90 bp ACCATGATGTCCTCCACACGCACCCGGTACTGCTGGTGGCGGCCCCAGCCGAGCCCAGAGCCGACAGCCTaGGGGGCCAGGATCTGTGTG +
Preference number: 4 (lower is better)
Translates to: TMMSSTRTRYCWWRPQPSPEPTA*GARICV
Trigger: CACACAGATCCTGGCCCCTCAGGCTGTCGGCTCTGG...GCTCGGCTGGGGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000636241.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR TCA 90 bp ACCATGATGTCCTCCACACGCACCCGGTACTGCTGGTGGCGGCCCCAGCCGAGCCAAGGAGACTGGTCCTaGGCTCCCTGCCCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: TMMSSTRTRYCWWRPQPSQGDWS*APCPFP
Trigger: CGGGAAGGGGCAGGGAGCTCAGGACCAGTCTCCTTG...GCTCGGCTGGGGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636241.1
ENST00000636661.1
CDS-3UTR GCA 90 bp ACTGCCACAGAAGAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGTGTGTCACCGCTCCTaGCAGCGCAGCTGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: TATEEAPEGDACRLCAPCVCHRS*QRSCPD
Trigger: GTCGGGGCAGCTGCGCTGGCAGGAGCGGTGACACAC...ACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTGGCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR GCA 90 bp TGCAGACTCTGGGCGACAGCGTTGGCCAGGATGACGGCGATCATGACAGGCAGGCGCTCCTGCATGTGCTaGCGCCGGCGGGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: CRLWATALARMTAIMTGRRSCMC*RRRAGL
Trigger: GAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCG...CCTGCCTGTCATGATCGCCGTCATCCTGGCCAACGCTGTCGCCCAGAGTCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGGTGGCTCTGCGCTCCTaGATGTGCTGCCGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: AHSGLTGMASTILGHPRGVALRS*MCCRRR
Trigger: CCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCAC...CCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGGGCTCCGGAGGGCGATaGCTGCCGACTCTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: AHSGLTGMASTILGHPRGGSGGR*LPTLRS
Trigger: GGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCC...CCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CTCCACCAGGCCCTGGCGGACCCACGTCCGATTGTCAAACAGGGTGACCAGCGTCGCTGTCGGAAGGGCTaGCCTCCCGGGGGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: LHQALADPRPIVKQGDQRRCRKG*PPGGGH
Trigger: ATGGCCTCCCCCGGGAGGGCAGCCCTTCCGACAGCG...ACGCTGGTCACCCTGTTTGACAATCGGACGTGGGTCCGCCAGGGCCTGGTGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGGTTCCGGCTCTGTCCTaGACTCGGCTCCCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: AHSGLTGMASTILGHPRGVPALS*TRLPAR
Trigger: GCGGGCCGGGAGCCGAGTCCAGGACAGAGCCGGAAC...CCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
CDS-3UTR CCA 90 bp GGCTCATCTCGCCTTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTCGCACCCGGTACTGCTaGTGGCGGCCCCAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: GSSRLPGPRHLPGRFGHARTRYC*WRPQPS
Trigger: GCTCGGCTGGGGCCGCCACCAGCAGTACCGGGTGCG...AGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAAGGCGAGATGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR TCA 90 bp CAGAAGAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGACTCCCCGGAAGGTGCAGCTaGGGGCCACATGGGGAACAT +
Preference number: 4 (lower is better)
Translates to: QKRLRRAMPADSALPVGLPGRCS*GPHGEH
Trigger: ATGTTCCCCATGTGGCCCTCAGCTGCACCTTCCGGG...GAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GGCCGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCTTCCGGAGCCAAGCGGCATCCCGCTaGCTAGGGCGCAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: GRTFTPCAVTEPSMAFRSQAASR*LGRRSA
Trigger: GGCTGACCTGCGCCCTAGGCAGCGGGATGCCGCTTG...GCTCCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GGGCTGCAGACTCTGGGCGACAGCGTTGGCCAGGATGACGGCGATCATGACAGGGTGTGTCACCGCTCCTaGCAGCGCAGCTGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: GLQTLGDSVGQDDGDHDRVCHRS*QRSCPD
Trigger: GTCGGGGCAGCTGCGCTGGCAGGAGCGGTGACACAC...CCTGTCATGATCGCCGTCATCCTGGCCAACGCTGTCGCCCAGAGTCTGCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR GCA 90 bp CCCGACCACAGCGTAGCCCCCAGGCACAATCCGGTAGGTGCTGCTGTCCGTATGGTGTGTCACCGCTCCTaGCAGCGCAGCTGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: PDHSVAPRHNPVGAAVRMVCHRS*QRSCPD
Trigger: GTCGGGGCAGCTGCGCTGGCAGGAGCGGTGACACAC...CATACGGACAGCAGCACCTACCGGATTGTGCCTGGGGGCTACGCTGTGGTCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR GCA 90 bp TCGGCCCTTGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGTGCAGCTGAGGTGTGTCACCGCTCCTaGCAGCGCAGCTGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: SALGPVQCQTQVPEGAAEVCHRS*QRSCPD
Trigger: GTCGGGGCAGCTGCGCTGGCAGGAGCGGTGACACAC...CTCAGCTGCACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR GCA 90 bp CACCAGGGGACTCCACTAGGGCCAGCATTCGGCCCTTGGTCCTGTGCAGTGCCACCGGAGGGCGATGCCTaGCGACTCTGCGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: HQGTPLGPAFGPWSCAVPPEGDA*RLCAPC
Trigger: ACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGG...TGGCACTGCACAGGACCAAGGGCCGAATGCTGGCCCTAGTGGAGTCCCCTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636661.1
CDS-3UTR GCA 90 bp GAGGGCCACATGGGGAACATCCCGCACCATGATGTCCTCCACACGCACCCGGTAGGCTCCGGAGGGCGATaGCTGCCGACTCTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: EGHMGNIPHHDVLHTHPVGSGGR*LPTLRS
Trigger: GGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCC...TACCGGGTGCGTGTGGAGGACATCATGGTGCGGGATGTTCCCCATGTGGCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CAGAAGAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGACTCGCCTCCAGCTGTAGCTaGCTCCTGCCTTCCGAAGGC +
Preference number: 4 (lower is better)
Translates to: QKRLRRAMPADSALPVGLASSCS*LLPSEG
Trigger: GCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGC...GAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp ACATCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCTGGTGGCGGCCCTCCTCCACCAGGCCCTaGCGGACCCACGTCCGATTG +
Preference number: 4 (lower is better)
Translates to: TSRTMMSSTRTRYCWWRPSSTRP*RTHVRL
Trigger: CAATCGGACGTGGGTCCGCCAGGGCCTGGTGGAGGA...GGGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGATGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp ATTTGTCGTCGCTGTCGGAAGGGCTGCCCTCCCGGGGGAGGCCATGACGGGAGTTCCTCCACCAGGCCCTaGCGGACCCACGTCCGATTG +
Preference number: 4 (lower is better)
Translates to: ICRRCRKGCPPGGGHDGSSSTRP*RTHVRL
Trigger: CAATCGGACGTGGGTCCGCCAGGGCCTGGTGGAGGA...ACTCCCGTCATGGCCTCCCCCGGGAGGGCAGCCCTTCCGACAGCGACGACAAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GCTGAGGGCCACATGGGGAACATCCCGCACCATGATGTCCTCCACACGCACCCGACCCGGTACTGCTGGTaGCGGCCCCAGCCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: AEGHMGNIPHHDVLHTHPTRYCW*RPQPSS
Trigger: TGAGCTCGGCTGGGGCCGCCACCAGCAGTACCGGGT...CGGGTGCGTGTGGAGGACATCATGGTGCGGGATGTTCCCCATGTGGCCCTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp CTCTTCAGGGCTCATCTCGCCTTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGCGCACCCGGTACTGCTaGTGGCGGCCCCAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: LFRAHLAFQVRVTCQGDSRTRYC*WRPQPS
Trigger: GCTCGGCTGGGGCCGCCACCAGCAGTACCGGGTGCG...CGAATCTCCCTGGCAAGTGACGCGGACCTGGAAGGCGAGATGAGCCCTGAAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGACTCTCTCCGTGGAGAGGTCTGGGTaGCTCTGCGCTCCTGCATGT +
Preference number: 4 (lower is better)
Translates to: EAPEGDACRLCAPCGTLSVERSG*LCAPAC
Trigger: ACATGCAGGAGCGCAGAGCCACCCAGACCTCTCCAC...GGAGAGAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR CCA 90 bp CAGCCTCAGGGGGTGGACTGCCACAGAAGAGGCTCCGGAGGGCGATGCCTGCCGGATAGTGGAGAGGTCTaGGTGGCTCTGCGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QPQGVDCHRRGSGGRCLPDSGEV*VALRSC
Trigger: GCAGGAGCGCAGAGCCACCCAGACCTCTCCACTATC...CGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTGGCAGTCCACCCCCTGAGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
3UTR CAA 72 bp ACCATCCTAGGCCACCCACGAGGGGCTCATTGGCATTaGTCGTCGCTGTCGGAAGGGCTGCCCTCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: TILGHPRGAHWH*SSLSEGLPSRG
Trigger: CCCCCGGGAGGGCAGCCCTTCCGACAGCGACGACAAATGCCAATGAGCCCCTCGTGGGTGGCCTAGGATGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp CCTCACCAGGGGACTCCACTAGGGCCAGCATTCGGCCCTTGGTCCTGTGCAGTGCCAGAGCCGACAGCCTaGGGGGCCAGGATCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PHQGTPLGPAFGPWSCAVPEPTA*GARICV
Trigger: CACACAGATCCTGGCCCCTCAGGCTGTCGGCTCTGG...CACTGCACAGGACCAAGGGCCGAATGCTGGCCCTAGTGGAGTCCCCTGGTGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636241.1
ENST00000636661.1
CDS-3UTR TCA 90 bp AGCTCCTCCACCAGGCCCTGGCGGACCCACGTCCGATTGTCAAACAGGGTGACCCCAGAGCCGACAGCCTaGGGGGCCAGGATCTGTGTG +
Preference number: 4 (lower is better)
Translates to: SSSTRPWRTHVRLSNRVTPEPTA*GARICV
Trigger: CACACAGATCCTGGCCCCTCAGGCTGTCGGCTCTGG...GGTCACCCTGTTTGACAATCGGACGTGGGTCCGCCAGGGCCTGGTGGAGGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR TCA 90 bp CTGGCGAGGGGCGGCCGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGCACTGGGCCCCCTCTTaGGTGCAGGCTTTAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LARGGRTFTPCAVTEPSMHWAPS*VQALGA
Trigger: AGCCCCTAAAGCCTGCACTCAAGAGGGGGCCCAGTG...CATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGGCCGCCCCTCGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp GGCCATGACGGGAGTGGGGCCCCCAGAGTGCATGCACCTCAGTGGTCTCCGTGTCACTGGGCCCCCTCTTaGGTGCAGGCTTTAGGGGCT +
Preference number: 4 (lower is better)
Translates to: GHDGSGAPRVHAPQWSPCHWAPS*VQALGA
Trigger: AGCCCCTAAAGCCTGCACTCAAGAGGGGGCCCAGTG...ACACGGAGACCACTGAGGTGCATGCACTCTGGGGGCCCCACTCCCGTCATGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp CACAGAAGAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGACTCACACCCTGTGCTGTaGCAGAGCCCTCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: HRRGSGGRCLPTLRSLWDSHPVL*QSPRWP
Trigger: AGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGA...GTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp GGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGACTCTCTCCGAATGCACATTCTGGGCTaGCGGGCATGGCTAGCACCA +
Preference number: 4 (lower is better)
Translates to: GSGGRCLPTLRSLWDSLRMHILG*RAWLAP
Trigger: TGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCAT...TCGGAGAGAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp GGGCTCAGCTGGGCCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCGGAGCAGGGGTCAAGTaGCCCCAACCCATCCTGCCA +
Preference number: 4 (lower is better)
Translates to: GLSWAPNNATTCERSMEPGAGVK*PQPILP
Trigger: TGGCAGGATGGGTTGGGGTCACTTGACCCCTGCTCC...GGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGCTGAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp ACCAGGGTGAGGAAGACGTTGGCACGTGGTGGGTTCCAGGCCTGTGAGGTGCTGCAAGCGGCATCCCGCTaGCTAGGGCGCAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: TRVRKTLARGGFQACEVLQAASR*LGRRSA
Trigger: GGCTGACCTGCGCCCTAGGCAGCGGGATGCCGCTTG...CAGCACCTCACAGGCCTGGAACCCACCACGTGCCAACGTCTTCCTCACCCTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR GCA 90 bp GCTGGGCCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCAGCAGAACAAGCGGCATCCCGCTaGCTAGGGCGCAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: AGPPTMPPPVNARWSPAEQAASR*LGRRSA
Trigger: GGCTGACCTGCGCCCTAGGCAGCGGGATGCCGCTTG...TTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000636180.1
ENST00000636241.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGACTCTCTCCTCCAGGCCTGTGAGGTaGTGGGTGGTTCTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: EAPEGDACRLCAPCGTLSSRPVR*WVVLAP
Trigger: AGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGA...GGAGAGAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR GCA 90 bp TCACTGCTGCTGGTGGCACTGTCTCGGAAGCTGGCGAGGGGCGGCCGGACTTTCCGGCCCTTGGTCCTGTaGAGTGCCAAACGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SLLLVALSRKLARGGRTFRPLVL*SAKRRS
Trigger: GGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCG...GAAAGTCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTGCCACCAGCAGCAGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGACTCTCTCCGAGGTCTCCGTGTCACTGCTaGTGGTGGCACTGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: LRRAMPADSALPVGLSPRSPCHC*WWHCLG
Trigger: TCCGAGACAGTGCCACCAGCAGCAGTGACACGGAGA...CCTCGGAGAGAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp ACTGCCACAGAAGAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGTGGGGCCCCCAGAGTaGATGCACCTCAGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: TATEEAPEGDACRLCAPCVGPPE*MHLSGL
Trigger: GAGACCACTGAGGTGCATGCACTCTGGGGGCCCCAC...ACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTGGCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GATGCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGACGCTGTCGGAAGGGCTaGCCTCCCGGGGGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: DAHSGLTGMASTILGHPRRCRKG*PPGGGH
Trigger: ATGGCCTCCCCCGGGAGGGCAGCCCTTCCGACAGCG...TCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GCTGGGGTGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGATCCTCCACCAGGCCCTaGCGGACCCACGTCCGATTG +
Preference number: 4 (lower is better)
Translates to: AGVQPPAVAASCLPKAEGSSTRP*RTHVRL
Trigger: CAATCGGACGTGGGTCCGCCAGGGCCTGGTGGAGGA...TCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCACCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp CGTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCCACCAGGTCCTCCACCAGGCCCTaGCGGACCCACGTCCGATTG +
Preference number: 4 (lower is better)
Translates to: RGGFQACEVLGGSSSSTRSSTRP*RTHVRL
Trigger: CAATCGGACGTGGGTCCGCCAGGGCCTGGTGGAGGA...CCTGGTGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636658.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp CACCAGGGGACTCCACTAGGGCCAGCATTCGGCCCTTGGTCCTGTGCAGTGCCATCCTCCACCAGGCCCTaGCGGACCCACGTCCGATTG +
Preference number: 4 (lower is better)
Translates to: HQGTPLGPAFGPWSCAVPSSTRP*RTHVRL
Trigger: CAATCGGACGTGGGTCCGCCAGGGCCTGGTGGAGGA...TGGCACTGCACAGGACCAAGGGCCGAATGCTGGCCCTAGTGGAGTCCCCTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636241.1
ENST00000636661.1
CDS-3UTR CCA 90 bp GTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCCACCAGGCGGCCCCACAGGGAACTaGGATGGTGGTGGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: VVGSRPVRCWVVLAPPPGGPTGN*DGGGQC
Trigger: GCACTGGCCACCACCATCCCAGTTCCCTGTGGGGCC...GCCTGGTGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636658.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp ATTCGGCCCTTGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGTGCAGCTGACCCGGTACTGCTGGTaGCGGCCCCAGCCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: IRPLVLCSAKRRSRKVQLTRYCW*RPQPSS
Trigger: TGAGCTCGGCTGGGGCCGCCACCAGCAGTACCGGGT...CAGCTGCACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp TGGAGAGGTCTGGGTGGCTCTGCGCTCCTGCATGTGCTGCCGCCGGCGGGCTGGCCTGTGAACGCTCGATaGAGCCCAGCAGAATCATGG +
Preference number: 4 (lower is better)
Translates to: WRGLGGSALLHVLPPAGWPVNAR*SPAESW
Trigger: CCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGG...CCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCACCCAGACCTCTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR CCA 90 bp TCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCTGGTGGCGGCCCCAGAGGGAAGCCCCCACCTaGCAAGTGCTGGTCCATTCC +
Preference number: 4 (lower is better)
Translates to: SRTMMSSTRTRYCWWRPQREAPT*QVLVHS
Trigger: GGAATGGACCAGCACTTGCCAGGTGGGGGCTTCCCT...CTGGGGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636241.1
CDS-3UTR CCA 90 bp CTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGACTCTCTCCGAGGCAACTCAAAGCAGCCTaGAGAGGAGCCGAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: LRRAMPADSALPVGLSPRQLKAA*RGAESH
Trigger: GTGGCTCTCGGCTCCTCTCCAGGCTGCTTTGAGTTG...CCTCGGAGAGAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636661.1
CDS-3UTR TCA 90 bp CCTTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCCCAGAGCCGACAGCCTaGGGGGCCAGGATCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PSRSASLAREIRTRFSLRPEPTA*GARICV
Trigger: CACACAGATCCTGGCCCCTCAGGCTGTCGGCTCTGG...GCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp GCTGGGGTGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAAGGTCAGCGTGGAGATaGGCAGGGTCACCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: AGVQPPAVAASCLPKAEGRSAWR*AGSPEP
Trigger: CGGCTCTGGTGACCCTGCTCATCTCCACGCTGACCT...TCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCACCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp CATGACGGGAGTGGGGCCCCCAGAGTGCATGCACCTCAGTGGTCTCCGTGTCACAGGTCAGCGTGGAGATaGGCAGGGTCACCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: HDGSGAPRVHAPQWSPCHRSAWR*AGSPEP
Trigger: CGGCTCTGGTGACCCTGCTCATCTCCACGCTGACCT...GTGACACGGAGACCACTGAGGTGCATGCACTCTGGGGGCCCCACTCCCGTCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp GTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCCACCAGGCAGGTCAGCGTGGAGATaGGCAGGGTCACCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: VVGSRPVRCWVVLAPPPGRSAWR*AGSPEP
Trigger: CGGCTCTGGTGACCCTGCTCATCTCCACGCTGACCT...GCCTGGTGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636658.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR TCA 90 bp CTGGGCTCAGCTGGGCCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCAGGTCAGCGTGGAGATaGGCAGGGTCACCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: LGSAGPPTMPPPVNARWSRSAWR*AGSPEP
Trigger: CGGCTCTGGTGACCCTGCTCATCTCCACGCTGACCT...GCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGCTGAGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR TCA 90 bp GCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGCCCGGAAGGTGCAGCTaGGGGCCACATGGGGAACAT +
Preference number: 4 (lower is better)
Translates to: AHSGLTGMASTILGHPRGPGRCS*GPHGEH
Trigger: ATGTTCCCCATGTGGCCCTCAGCTGCACCTTCCGGG...CCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp GCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGCACTGGGCCCCCTCTTaGGTGCAGGCTTTAGGGGCT +
Preference number: 4 (lower is better)
Translates to: AHSGLTGMASTILGHPRGHWAPS*VQALGA
Trigger: AGCCCCTAAAGCCTGCACTCAAGAGGGGGCCCAGTG...CCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp GCCACATGGGGAACATCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCGAAGGACTCAGGAGCTaGGAGGGAGCCCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: ATWGTSRTMMSSTRTRYCEGLRS*EGALQP
Trigger: GGGCTGGAGGGCTCCCTCTCAGCTCCTGAGTCCTTC...GCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGATGTTCCCCATGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636241.1
CDS-3UTR GCA 90 bp AAGATGACCAGGGTGAGGAAGACGTTGGCACGTGGTGGGTTCCAGGCCTGTGAGGCCATCTCCGCGCACTaGCCTCTCGCCTCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: KMTRVRKTLARGGFQACEAISAH*PLASLG
Trigger: GCCGAGGGAGGCGAGAGGGCAGTGCGCGGAGATGGC...CTCACAGGCCTGGAACCCACCACGTGCCAACGTCTTCCTCACCCTGGTCATCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636180.1
ENST00000636661.1
CDS-3UTR GCA 90 bp GTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCCACCAGGCCCTCCCCGGGACATCCACTaGTGGGCTTGCAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: VGSRPVRCWVVLAPPPGPPRDIH*WACRQA
Trigger: TGCCTGTCTGCAAGCCCAGCAGTGGATGTCCCGGGG...AGGGCCTGGTGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR GCA 90 bp GTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCCACCAGGCCCCCGGGACATCCACTaGTGGGCTTGCAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: VVGSRPVRCWVVLAPPPGPRDIH*WACRQA
Trigger: TGCCTGTCTGCAAGCCCAGCAGTGGATGTCCCGGGG...GCCTGGTGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR GCA 90 bp GCCACAGAAGAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGTCTTCATCTCAGGGATaGCAGAGCCGACAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: ATEEAPEGDACRLCAPCGSSSQG*QSRQPE
Trigger: CTCAGGCTGTCGGCTCTGGCATCCCTGAGATGAAGA...CCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp TGCTGCTGGTGGCACTGTCTCGGAAGCTGGCGAGGGGCGGCCGGACTTTCACACGGAACCAGGCAGCCATaGTTTCACCCACCAGACGCC +
Preference number: 4 (lower is better)
Translates to: CCWWHCLGSWRGAAGLSHGTRQP*FHPPDA
Trigger: GGCGTCTGGTGGGTGAAAGCATGGCTGCCTGGTTCC...GTGTGAAAGTCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTGCCACCAGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GCCACCACCTGTGAACGCTCGATGGAGCCCAGCAGAATCATGGACTCAGGGGACGTGTGTCACCGCTCCTaGCAGCGCAGCTGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: ATTCERSMEPSRIMDSGDVCHRS*QRSCPD
Trigger: GTCGGGGCAGCTGCGCTGGCAGGAGCGGTGACACAC...GTCCCCTGAGTCCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR GCA 90 bp GCTGGGGTGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGACGGCCCTTGGTCCTGTaGAGTGCCAAACGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: AGVQPPAVAASCLPKAEGRPLVL*SAKRRS
Trigger: GGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCG...TCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCACCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGCGGCCCTTGGTCCTGTaGAGTGCCAAACGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: AHSGLTGMASTILGHPRGRPLVL*SAKRRS
Trigger: GGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCG...CCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GCTGAGGGCCACATGGGGAACATCCCGCACCATGATGTCCTCCACACGCACCCGCGGCCCTTGGTCCTGTaGAGTGCCAAACGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: AEGHMGNIPHHDVLHTHPRPLVL*SAKRRS
Trigger: GGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCG...CGGGTGCGTGTGGAGGACATCATGGTGCGGGATGTTCCCCATGTGGCCCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR GCA 90 bp AAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGCTCCTGCATGTGCTaGCGCCGGCGGGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: KDAHSGLTGMASTILGHPRSCMC*RRRAGL
Trigger: GAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCG...TGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp TGGGTAGTGGGTCAGATTCCAGGTAGGATGAACTGGGAGAAGCTGGCACCCCAGCGCTCCTGCATGTGCTaGCGCCGGCGGGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: WVVGQIPGRMNWEKLAPQRSCMC*RRRAGL
Trigger: GAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCG...CTGGGGTGCCAGCTTCTCCCAGTTCATCCTACCTGGAATCTGACCCACTACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp AGGTGGGTAGTGGGTCAGATTCCAGGTAGGATGAACTGGGAGAAGCTGGCACCCCTGCGCTCCTGCATGTaGTGCCGCCGGCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RWVVGQIPGRMNWEKLAPLRSCM*CRRRAG
Trigger: CCCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAG...GGGTGCCAGCTTCTCCCAGTTCATCCTACCTGGAATCTGACCCACTACCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CCACAGCGTAGCCCCCAGGCACAATCCGGTAGGTGCTGCTGTCCGTATGAATTCGTGGCTCTGCGCTCCTaGATGTGCTGCCGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: PQRSPQAQSGRCCCPYEFVALRS*MCCRRR
Trigger: CCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCAC...GAATTCATACGGACAGCAGCACCTACCGGATTGTGCCTGGGGGCTACGCTGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGGCTAGGTCTGGGTGGCTCTaGGCTCCTGCATGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: HSGLTGMASTILGHPRGARSGWL*APACAA
Trigger: GGCAGCACATGCAGGAGCGCAGAGCCACCCAGACCT...AGCCCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp TCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGGCTCATGATGCCTGCCGACTCTaGGCTCCCTGTGGGACTCTC +
Preference number: 4 (lower is better)
Translates to: SGLTGMASTILGHPRGAHDACRL*APCGTL
Trigger: GAGAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATC...ATGAGCCCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GATGCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGACCGGAGGGCGATGCCTaGCGACTCTGCGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: DAHSGLTGMASTILGHPRPEGDA*RLCAPC
Trigger: ACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGG...TCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CTCGCCTTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTCCGGAGGGCGATGCCTaGCGACTCTGCGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: LAFQVRVTCQGDSDTLQLPEGDA*RLCAPC
Trigger: ACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGG...AAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAAGGCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CGGGCTGCTGGGAAGGCTGAGTCTTCTGTGTTCACCTGGAAGCAGACAGAAGCCGGCTCCGGAGGGCGATaGCTGCCGACTCTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: RAAGKAESSVFTWKQTEAGSGGR*LPTLRS
Trigger: GGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCC...GGCTTCTGTCTGCTTCCAGGTGAACACAGAAGACTCAGCCTTCCCAGCAGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GGCCAGCATTCGGCCCTTGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGTGTGGGGCCCCCAGAGTaGATGCACCTCAGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: GQHSALGPVQCQTQVPEGVGPPE*MHLSGL
Trigger: GAGACCACTGAGGTGCATGCACTCTGGGGGCCCCAC...ACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGAATGCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GCTGGGGTGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAGCCTCCAGCTGTAGCTaGCTCCTGCCTTCCGAAGGC +
Preference number: 4 (lower is better)
Translates to: AGVQPPAVAASCLPKAEGASSCS*LLPSEG
Trigger: GCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGC...TCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCACCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp TGGAGAGGTCTGGGTGGCTCTGCGCTCCTGCATGTGCTGCCGCCGGCGGGCTGGCTCTGGAAGACTTGTTaGAGGTGGGTAGTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: WRGLGGSALLHVLPPAGWLWKTC*RWVVGQ
Trigger: CTGACCCACTACCCACCTGCAACAAGTCTTCCAGAG...CCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCACCCAGACCTCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp ACATCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCTGGTGGCGGCCCAAGAGGACGCCTCTTTaGCAAGCGGCATCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: TSRTMMSSTRTRYCWWRPKRTPL*QAASRC
Trigger: GCAGCGGGATGCCGCTTGGCAAAGAGGCGTCCTCTT...GGGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGATGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636661.1
ENST00000638134.1
CDS-3UTR GCA 90 bp GTCTGGGTGGCTCTGCGCTCCTGCATGTGCTGCCGCCGGCGGGCTGGGCTCAGCATGGACTCTGGCAAGTaGTGGTCCATTCCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: VWVALRSCMCCRRRAGLSMDSGK*WSIPFG
Trigger: TCCAAAGGGAATGGACCAGCACTTGCCAGAGTCCAT...GCTGAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCACCCAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636661.1
CDS-3UTR CCA 90 bp CCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCAGCAGAATCATGGGTTCCGGCTCTGTCCTaGACTCGGCTCCCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: PPTMPPPVNARWSPAESWVPALS*TRLPAR
Trigger: GCGGGCCGGGAGCCGAGTCCAGGACAGAGCCGGAAC...CCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636180.1
ENST00000636661.1
CDS-3UTR CCA 90 bp TGGCACGTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCCAGTACTGCAGCGCCCGTaGCTCCATCCCTTCCTCCGC +
Preference number: 4 (lower is better)
Translates to: WHVVGSRPVRCWVVLAPPVLQRP*LHPFLR
Trigger: GCGGAGGAAGGGATGGAGCCACGGGCGCTGCAGTAC...TGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACCACGTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636180.1
ENST00000636661.1
CDS-3UTR CCA 90 bp CTGGTGACACTGGGCCCCCTCTTGAGTGCAGGCTTTAGGGGCTTGTGGGTCTCCGTACTGCAGCGCCCGTaGCTCCATCCCTTCCTCCGC +
Preference number: 4 (lower is better)
Translates to: LVTLGPLLSAGFRGLWVSVLQRP*LHPFLR
Trigger: GCGGAGGAAGGGATGGAGCCACGGGCGCTGCAGTAC...GGAGACCCACAAGCCCCTAAAGCCTGCACTCAAGAGGGGGCCCAGTGTCACCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636180.1
ENST00000636661.1
CDS-3UTR CCA 90 bp CGTTGGCACGTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTTCCTCCACCAGGCCCTaGCGGACCCACGTCCGATTG +
Preference number: 4 (lower is better)
Translates to: RWHVVGSRPVRCWVVLAPSSTRP*RTHVRL
Trigger: CAATCGGACGTGGGTCCGCCAGGGCCTGGTGGAGGA...AGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACCACGTGCCAACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636658.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp TGGACTCAGGGGACTCCACTAGGGCCAGCATTCGGCCCTTGGTCCTGTGCAGTGTCCTCCACCAGGCCCTaGCGGACCCACGTCCGATTG +
Preference number: 4 (lower is better)
Translates to: WTQGTPLGPAFGPWSCAVSSTRP*RTHVRL
Trigger: CAATCGGACGTGGGTCCGCCAGGGCCTGGTGGAGGA...CACTGCACAGGACCAAGGGCCGAATGCTGGCCCTAGTGGAGTCCCCTGAGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp TCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCTGGTGGCGGCCCCAGAGGCCTGTGAGGTGCTaGGTGGTTCTAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SRTMMSSTRTRYCWWRPQRPVRC*VVLAPP
Trigger: TGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCT...CTGGGGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp CACGTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCCACCAGGCCCCACAGGGAACTaGGATGGTGGTGGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: HVVGSRPVRCWVVLAPPPGPTGN*DGGGQC
Trigger: GCACTGGCCACCACCATCCCAGTTCCCTGTGGGGCC...TGGTGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACCACGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636658.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp GAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGACTCTCTCCACACGATCACAGCCGTaGACACTGTGTGTGTCACCG +
Preference number: 4 (lower is better)
Translates to: EAPEGDACRLCAPCGTLSTRSQP*TLCVSP
Trigger: CGGTGACACACACAGTGTCCACGGCTGTGATCGTGT...GGAGAGAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR CCA 90 bp AAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGCACCCGGTACTGCTaGTGGCGGCCCCAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: KDAHSGLTGMASTILGHPRTRYC*WRPQPS
Trigger: GCTCGGCTGGGGCCGCCACCAGCAGTACCGGGTGCG...TGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp CCGTGTCACTGCTGCTGGTGGCACTGTCTCGGAAGCTGGCGAGGGGCGGCCGGACCTGTGAACGCTCGATaGAGCCCAGCAGAATCATGG +
Preference number: 4 (lower is better)
Translates to: PCHCCWWHCLGSWRGAAGPVNAR*SPAESW
Trigger: CCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGG...TCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTGCCACCAGCAGCAGTGACACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GAAGCTGGCGAGGGGCGGCCGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCGTGGAGAGGTCTGGGTaGCTCTGCGCTCCTGCATGT +
Preference number: 4 (lower is better)
Translates to: EAGEGRPDFHTLCCDRALVERSG*LCAPAC
Trigger: ACATGCAGGAGCGCAGAGCCACCCAGACCTCTCCAC...GAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGGCCGCCCCTCGCCAGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp ACATCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCTGGTGGCGGCCCGTGGAGAGGTCTGGGTaGCTCTGCGCTCCTGCATGT +
Preference number: 4 (lower is better)
Translates to: TSRTMMSSTRTRYCWWRPVERSG*LCAPAC
Trigger: ACATGCAGGAGCGCAGAGCCACCCAGACCTCTCCAC...GGGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGATGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR CCA 90 bp TCACTGCTGCTGGTGGCACTGTCTCGGAAGCTGGCGAGGGGCGGCCGGACTTTCGATAGTGGAGAGGTCTaGGTGGCTCTGCGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SLLLVALSRKLARGGRTFDSGEV*VALRSC
Trigger: GCAGGAGCGCAGAGCCACCCAGACCTCTCCACTATC...GAAAGTCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTGCCACCAGCAGCAGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGACTCTCTCCGAGTCCGCTCCACCAGCTaGAAGGGAGCAGGATCAATT +
Preference number: 4 (lower is better)
Translates to: GSGGRCLPTLRSLWDSLRVRSTS*KGAGSI
Trigger: AATTGATCCTGCTCCCTTCCAGCTGGTGGAGCGGAC...TCGGAGAGAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GCTGGGCCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCAGCAGAACACTGTCTCGGAAGCTaGCGAGGGGCGGCCGGACTT +
Preference number: 4 (lower is better)
Translates to: AGPPTMPPPVNARWSPAEHCLGS*RGAAGL
Trigger: AAGTCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTG...TTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp ATTTGTCGTCGCTGTCGGAAGGGCTGCCCTCCCGGGGGAGGCCATGACGGGAGTCCGTGTCACTGCTGCTaGTGGCACTGTCTCGGAAGC +
Preference number: 4 (lower is better)
Translates to: ICRRCRKGCPPGGGHDGSPCHCC*WHCLGS
Trigger: GCTTCCGAGACAGTGCCACCAGCAGCAGTGACACGG...ACTCCCGTCATGGCCTCCCCCGGGAGGGCAGCCCTTCCGACAGCGACGACAAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp TTTGTCGTCGCTGTCGGAAGGGCTGCCCTCCCGGGGGAGGCCATGACGGGAGTGGTGCATGCACCTCAGTaGTCTCCGTGTCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: FVVAVGRAALPGEAMTGVVHAPQ*SPCHCC
Trigger: GCAGCAGTGACACGGAGACCACTGAGGTGCATGCAC...CACTCCCGTCATGGCCTCCCCCGGGAGGGCAGCCCTTCCGACAGCGACGACAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp CACAGAAGAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGACCCACGAGGGGCTCATTaGCATTTGTCGTCGCTGTCG +
Preference number: 4 (lower is better)
Translates to: HRRGSGGRCLPTLRSLWDPRGAH*HLSSLS
Trigger: CGACAGCGACGACAAATGCCAATGAGCCCCTCGTGG...GTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GGGCCAGCATTCGGCCCTTGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGCCGAAGCTTCGACCCTaGGCAATGCCCCTAGCACCT +
Preference number: 4 (lower is better)
Translates to: GPAFGPWSCAVPNAGPGRPKLRP*AMPLAP
Trigger: AGGTGCTAGGGGCATTGCCCAGGGTCGAAGCTTCGG...CCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGAATGCTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636241.1
ENST00000636661.1
3UTR CAA 72 bp GACTCAGGGGACTCCACTAGGGCCAGCATTCGGCCCTaGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: DSGDSTRASIRP*VLCSAKRRSRK
Trigger: CTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGAATGCTGGCCCTAGTGGAGTCCCCTGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
3UTR CAA 72 bp TCACCAGGGGACTCCACTAGGGCCAGCATTCGGCCCTaGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: SPGDSTRASIRP*VLCSAKRRSRK
Trigger: CTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGAATGCTGGCCCTAGTGGAGTCCCCTGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636241.1
ENST00000636661.1
CDS-3UTR TCA 90 bp CTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGACTCTCTCCGAGGCAGCGTCTCTTTCTGTaGGAGCTGTCCAGCCATGAA +
Preference number: 4 (lower is better)
Translates to: LRRAMPADSALPVGLSPRQRLFL*ELSSHE
Trigger: TTCATGGCTGGACAGCTCTCACAGAAAGAGACGCTG...CCTCGGAGAGAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR TCA 90 bp GAGGGCCACATGGGGAACATCCCGCACCATGATGTCCTCCACACGCACCCGGTACCCGGAAGGTGCAGCTaGGGGCCACATGGGGAACAT +
Preference number: 4 (lower is better)
Translates to: EGHMGNIPHHDVLHTHPVPGRCS*GPHGEH
Trigger: ATGTTCCCCATGTGGCCCTCAGCTGCACCTTCCGGG...TACCGGGTGCGTGTGGAGGACATCATGGTGCGGGATGTTCCCCATGTGGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR TCA 90 bp CTGGTGGCGGCCCCAGCCGAGCTCAGGCAGGTAGGGCAGTTTCTTGATTCGGATCCCGGAAGGTGCAGCTaGGGGCCACATGGGGAACAT +
Preference number: 4 (lower is better)
Translates to: LVAAPAELRQVGQFLDSDPGRCS*GPHGEH
Trigger: ATGTTCCCCATGTGGCCCTCAGCTGCACCTTCCGGG...ATCCGAATCAAGAAACTGCCCTACCTGCCTGAGCTCGGCTGGGGCCGCCACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR TCA 90 bp GCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGTCACACCCTGTGCTGTaGCAGAGCCCTCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: AHSGLTGMASTILGHPRGSHPVL*QSPRWP
Trigger: AGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGA...CCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp CAGCCTCAGGGGGTGGACTGCCACAGAAGAGGCTCCGGAGGGCGATGCCTGCCGAGATTCCAGGTAGGATaGACTGGGAGAAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: QPQGVDCHRRGSGGRCLPRFQVG*TGRSWH
Trigger: GTGCCAGCTTCTCCCAGTTCATCCTACCTGGAATCT...CGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTGGCAGTCCACCCCCTGAGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp CGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCTTCCGGAGCTCCGGAGCAGGGGTCAAGTaGCCCCAACCCATCCTGCCA +
Preference number: 4 (lower is better)
Translates to: RTFTPCAVTEPSMAFRSSGAGVK*PQPILP
Trigger: TGGCAGGATGGGTTGGGGTCACTTGACCCCTGCTCC...GGAGCTCCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp TGGGTGGCTCTGCGCTCCTGCATGTGCTGCCGCCGGCGGGCTGGGCTCAGCTGGGAAAACACTGCTGGCTaGTTTCTCAGTGAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: WVALRSCMCCRRRAGLSWENTAG*FLSEVP
Trigger: AGGCACTTCACTGAGAAATCAGCCAGCAGTGTTTTC...CCAGCTGAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636661.1
CDS-3UTR GCA 90 bp GCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATGAAAGAGCCATCTCCGCGCACTaGCCTCTCGCCTCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: AASSCSCLLPSEGRRNERAISAH*PLASLG
Trigger: GCCGAGGGAGGCGAGAGGGCAGTGCGCGGAGATGGC...TCTTTCATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
CDS-3UTR GCA 90 bp AAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCAGCCATCTCCGCGCACTaGCCTCTCGCCTCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: KDAHSGLTGMASTILGHPAISAH*PLASLG
Trigger: GCCGAGGGAGGCGAGAGGGCAGTGCGCGGAGATGGC...TGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
CDS-3UTR GCA 90 bp GGCTCATCTCGCCTTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTAGGGTCTGCTCGTACTaGAGCGCCCGTGGCTCCATC +
Preference number: 4 (lower is better)
Translates to: GSSRLPGPRHLPGRFGHARVCSY*SARGSI
Trigger: GATGGAGCCACGGGCGCTGCAGTACGAGCAGACCCT...AGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAAGGCGAGATGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636180.1
ENST00000636661.1
CDS-3UTR GCA 90 bp GGGCCAGCATTCGGCCCTTGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGCCATACATCAGGGTCTaGTCGTACTGCAGCGCCCGT +
Preference number: 4 (lower is better)
Translates to: GPAFGPWSCAVPNAGPGRPYIRV*SYCSAR
Trigger: ACGGGCGCTGCAGTACGAGCAGACCCTGATGTATGG...CCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGAATGCTGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636241.1
ENST00000636661.1
ENST00000638134.1
CDS-3UTR GCA 90 bp CGGCCCTTGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGTGCAGCTGAGGCCATACATCAGGGTCTaGTCGTACTGCAGCGCCCGT +
Preference number: 4 (lower is better)
Translates to: RPLVLCSAKRRSRKVQLRPYIRV*SYCSAR
Trigger: ACGGGCGCTGCAGTACGAGCAGACCCTGATGTATGG...CCTCAGCTGCACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636241.1
ENST00000636661.1
ENST00000638134.1
CDS-3UTR GCA 90 bp TGCAGACTCTGGGCGACAGCGTTGGCCAGGATGACGGCGATCATGACAGGCAGGCCCCGGGACATCCACTaGTGGGCTTGCAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: CRLWATALARMTAIMTGRPRDIH*WACRQA
Trigger: TGCCTGTCTGCAAGCCCAGCAGTGGATGTCCCGGGG...CCTGCCTGTCATGATCGCCGTCATCCTGGCCAACGCTGTCGCCCAGAGTCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000636180.1
ENST00000636241.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR GCA 90 bp GCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGCAAAAGGGCCCTCTTTaGCAAGCGGCATCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: AHSGLTGMASTILGHPRGQKGPL*QAASRC
Trigger: GCAGCGGGATGCCGCTTGGCAAAGAGGGCCCTTTTG...CCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000434054.6
ENST00000457512.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GGGCTGCAGACTCTGGGCGACAGCGTTGGCCAGGATGACGGCGATCATGACAGGCAAAAGGGCCCTCTTTaGCAAGCGGCATCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GLQTLGDSVGQDDGDHDRQKGPL*QAASRC
Trigger: GCAGCGGGATGCCGCTTGGCAAAGAGGGCCCTTTTG...CCTGTCATGATCGCCGTCATCCTGGCCAACGCTGTCGCCCAGAGTCTGCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637909.1
CDS-3UTR GCA 90 bp CCCACGAGGGGCTCATTGGCATTTGTCGTCGCTGTCGGAAGGGCTGCCCTCCCGTCCAGGCCTGTGAGGTaGTGGGTGGTTCTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PTRGSLAFVVAVGRAALPSRPVR*WVVLAP
Trigger: AGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGA...CGGGAGGGCAGCCCTTCCGACAGCGACGACAAATGCCAATGAGCCCCTCGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CCCGACCACAGCGTAGCCCCCAGGCACAATCCGGTAGGTGCTGCTGTCCGTATGGGAACCAGGCAGCCATaGTTTCACCCACCAGACGCC +
Preference number: 4 (lower is better)
Translates to: PDHSVAPRHNPVGAAVRMGTRQP*FHPPDA
Trigger: GGCGTCTGGTGGGTGAAAGCATGGCTGCCTGGTTCC...CATACGGACAGCAGCACCTACCGGATTGTGCCTGGGGGCTACGCTGTGGTCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR GCA 90 bp CCACAGCGTAGCCCCCAGGCACAATCCGGTAGGTGCTGCTGTCCGTATGAATTCGTGTGTCACCGCTCCTaGCAGCGCAGCTGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: PQRSPQAQSGRCCCPYEFVCHRS*QRSCPD
Trigger: GTCGGGGCAGCTGCGCTGGCAGGAGCGGTGACACAC...GAATTCATACGGACAGCAGCACCTACCGGATTGTGCCTGGGGGCTACGCTGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR GCA 90 bp GGCTCATCTCGCCTTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTCGGCCCTTGGTCCTGTaGAGTGCCAAACGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GSSRLPGPRHLPGRFGHARPLVL*SAKRRS
Trigger: GGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCG...AGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAAGGCGAGATGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR GCA 90 bp ACTCAGGGGACTCCACTAGGGCCAGCATTCGGCCCTTGGTCCTGTGCAGTGCCACGGCCCTTGGTCCTGTaGAGTGCCAAACGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: TQGTPLGPAFGPWSCAVPRPLVL*SAKRRS
Trigger: GGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCG...TGGCACTGCACAGGACCAAGGGCCGAATGCTGGCCCTAGTGGAGTCCCCTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR GCA 90 bp GAGGGCCACATGGGGAACATCCCGCACCATGATGTCCTCCACACGCACCCGGTACGGCCCTTGGTCCTGTaGAGTGCCAAACGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: EGHMGNIPHHDVLHTHPVRPLVL*SAKRRS
Trigger: GGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCG...TACCGGGTGCGTGTGGAGGACATCATGGTGCGGGATGTTCCCCATGTGGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR GCA 90 bp CCTTCCGAAGGCAGAAGGAATGAAAGATGCACATTCTGGGCTGACGGGCATGGCCGCTCCTGCATGTGCTaGCGCCGGCGGGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: PSEGRRNERCTFWADGHGRSCMC*RRRAGL
Trigger: GAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCG...GCCATGCCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTCTGCCTTCGGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CCGAAGGCAGAAGGAATGAAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCCGCTCCTGCATGTGCTaGCGCCGGCGGGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: PKAEGMKDAHSGLTGMASRSCMC*RRRAGL
Trigger: GAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCG...GCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTCTGCCTTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATGAAAGATGCACGCTCCTGCATGTGCTaGCGCCGGCGGGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: PPAVAASCLPKAEGMKDARSCMC*RRRAGL
Trigger: GAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCG...TGCATCTTTCATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CCGAAGGCAGAAGGAATGAAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCCTGCGCTCCTGCATGTaGTGCCGCCGGCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PKAEGMKDAHSGLTGMASLRSCM*CRRRAG
Trigger: CCCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAG...GCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTCTGCCTTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CCTTCCGAAGGCAGAAGGAATGAAAGATGCACATTCTGGGCTGACGGGCATGGCCTGCGCTCCTGCATGTaGTGCCGCCGGCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PSEGRRNERCTFWADGHGLRSCM*CRRRAG
Trigger: CCCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAG...GCCATGCCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTCTGCCTTCGGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp ACGCCCAAATGCTGCTCCAATGACAAAGACAGGCATGAAGGCCCCACAGGGAACCTGCGCTCCTGCATGTaGTGCCGCCGGCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TPKCCSNDKDRHEGPTGNLRSCM*CRRRAG
Trigger: CCCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAG...GTTCCCTGTGGGGCCTTCATGCCTGTCTTTGTCATTGGAGCAGCATTTGGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp AGACGCCCAAATGCTGCTCCAATGACAAAGACAGGCATGAAGGCCCCACAGGGACTGCGCTCCTGCATGTaGTGCCGCCGGCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RRPNAAPMTKTGMKAPQGLRSCM*CRRRAG
Trigger: CCCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAG...TCCCTGTGGGGCCTTCATGCCTGTCTTTGTCATTGGAGCAGCATTTGGGCGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATGAAAGAGTGGCTCTGCGCTCCTaGATGTGCTGCCGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: AASSCSCLLPSEGRRNERVALRS*MCCRRR
Trigger: CCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCAC...TCTTTCATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp TGGGTAGTGGGTCAGATTCCAGGTAGGATGAACTGGGAGAAGCTGGCACCCCAGGTGGCTCTGCGCTCCTaGATGTGCTGCCGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: WVVGQIPGRMNWEKLAPQVALRS*MCCRRR
Trigger: CCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCAC...CTGGGGTGCCAGCTTCTCCCAGTTCATCCTACCTGGAATCTGACCCACTACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CAGCGTAGCCCCCAGGCACAATCCGGTAGGTGCTGCTGTCCGTATGAATTCCATGTGGCTCTGCGCTCCTaGATGTGCTGCCGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: QRSPQAQSGRCCCPYEFHVALRS*MCCRRR
Trigger: CCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCAC...ATGGAATTCATACGGACAGCAGCACCTACCGGATTGTGCCTGGGGGCTACGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp TGCAGACTCTGGGCGACAGCGTTGGCCAGGATGACGGCGATCATGACAGGCAGGAGGTCTGGGTGGCTCTaGGCTCCTGCATGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: CRLWATALARMTAIMTGRRSGWL*APACAA
Trigger: GGCAGCACATGCAGGAGCGCAGAGCCACCCAGACCT...CCTGCCTGTCATGATCGCCGTCATCCTGGCCAACGCTGTCGCCCAGAGTCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CCGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCTTCCGGAGCTCAGGTCTGGGTGGCTCTaGGCTCCTGCATGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PDFHTLCCDRALDGLPELRSGWL*APACAA
Trigger: GGCAGCACATGCAGGAGCGCAGAGCCACCCAGACCT...GAGCTCCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCAGCAGAATCATGGCCGGAGGGCGATGCCTaGCGACTCTGCGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: PPTMPPPVNARWSPAESWPEGDA*RLCAPC
Trigger: ACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGG...CCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GTGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATGAAAGGCTCCGGAGGGCGATaGCTGCCGACTCTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: VQPPAVAASCLPKAEGMKGSGGR*LPTLRS
Trigger: GGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCC...TTTCATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTCTCACAGGATGGCTCCGGAGGGCGATaGCTGCCGACTCTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: ASLAREIRTRFSLRFSQDGSGGR*LPTLRS
Trigger: GGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCC...ATCCTGTGAGAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR GCA 90 bp TGGAGAGGTCTGGGTGGCTCTGCGCTCCTGCATGTGCTGCCGCCGGCGGGCTGGACAGGTTCATCTAGTTaGTGCTCCTCCCACTCCAGA +
Preference number: 4 (lower is better)
Translates to: WRGLGGSALLHVLPPAGWTGSSS*CSSHSR
Trigger: TCTGGAGTGGGAGGAGCAGCAACTAGATGAACCTGT...CCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCACCCAGACCTCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATGAAAGACGCTGTCGGAAGGGCTaGCCTCCCGGGGGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: AASSCSCLLPSEGRRNERRCRKG*PPGGGH
Trigger: ATGGCCTCCCCCGGGAGGGCAGCCCTTCCGACAGCG...TCTTTCATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp TGGGAACCAGGCAGCCATGCTTTCACCCACCAGACGCCCAAATGCTGCTCCAATCGCTGTCGGAAGGGCTaGCCTCCCGGGGGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: WEPGSHAFTHQTPKCCSNRCRKG*PPGGGH
Trigger: ATGGCCTCCCCCGGGAGGGCAGCCCTTCCGACAGCG...ATTGGAGCAGCATTTGGGCGTCTGGTGGGTGAAAGCATGGCTGCCTGGTTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp TGCTGGTGGCACTGTCTCGGAAGCTGGCGAGGGGCGGCCGGACTTTCACACCCTGCTGTAGCTGCCTCCTaGCTTCCGAAGGCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: CWWHCLGSWRGAAGLSHPAVAAS*LPKAEG
Trigger: TCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGC...AGGGTGTGAAAGTCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTGCCACCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CACGTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCCACCAGCCTCCAGCTGTAGCTaGCTCCTGCCTTCCGAAGGC +
Preference number: 4 (lower is better)
Translates to: HVVGSRPVRCWVVLAPPPASSCS*LLPSEG
Trigger: GCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGC...TGGTGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACCACGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GGGCCAGCATTCGGCCCTTGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGCCCCCACCTGGCAAGTaGTGGTCCATTCCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: GPAFGPWSCAVPNAGPGRPPPGK*WSIPFG
Trigger: TCCAAAGGGAATGGACCAGCACTTGCCAGGTGGGGG...CCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGAATGCTGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636241.1
CDS-3UTR CCA 90 bp TGGGTAGTGGGTCAGATTCCAGGTAGGATGAACTGGGAGAAGCTGGCACCCCAGGTTCCGGCTCTGTCCTaGACTCGGCTCCCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: WVVGQIPGRMNWEKLAPQVPALS*TRLPAR
Trigger: GCGGGCCGGGAGCCGAGTCCAGGACAGAGCCGGAAC...CTGGGGTGCCAGCTTCTCCCAGTTCATCCTACCTGGAATCTGACCCACTACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
CDS-3UTR CCA 90 bp GATGCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGTACTGCAGCGCCCGTaGCTCCATCCCTTCCTCCGC +
Preference number: 4 (lower is better)
Translates to: DAHSGLTGMASTILGHPRVLQRP*LHPFLR
Trigger: GCGGAGGAAGGGATGGAGCCACGGGCGCTGCAGTAC...TCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
CDS-3UTR CCA 90 bp ACCATGATGTCCTCCACACGCACCCGGTACTGCTGGTGGCGGCCCCAGCCGAGCGAGCAGCTTCCTCTTTaGCAAAGGCCCCAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: TMMSSTRTRYCWWRPQPSEQLPL*QRPQGP
Trigger: AGGACCTTGGGGCCTTTGCCAAAGAGGAAGCTGCTC...GCTCGGCTGGGGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636241.1
ENST00000636661.1
ENST00000638134.1
CDS-3UTR CCA 90 bp CCGTGTCACTGCTGCTGGTGGCACTGTCTCGGAAGCTGGCGAGGGGCGGCCGGATGCTTCCGCATCACCTaGACAATCTTCCGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: PCHCCWWHCLGSWRGAAGCFRIT*TIFRFR
Trigger: CCTGAACCGGAAGATTGTCCAGGTGATGCGGAAGCA...TCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTGCCACCAGCAGCAGTGACACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GATGCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGATCCTCCACCAGGCCCTaGCGGACCCACGTCCGATTG +
Preference number: 4 (lower is better)
Translates to: DAHSGLTGMASTILGHPRSSTRP*RTHVRL
Trigger: CAATCGGACGTGGGTCCGCCAGGGCCTGGTGGAGGA...TCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GGGCCAGCATTCGGCCCTTGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGAGGCCTGTGAGGTGCTaGGTGGTTCTAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GPAFGPWSCAVPNAGPGRRPVRC*VVLAPP
Trigger: TGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCT...CCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGAATGCTGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp GGGCTCAGCTGGGCCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCAGGCCTGTGAGGTGCTaGGTGGTTCTAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GLSWAPNNATTCERSMEPRPVRC*VVLAPP
Trigger: TGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCT...GGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGCTGAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR CCA 90 bp CCCACGAGGGGCTCATTGGCATTTGTCGTCGCTGTCGGAAGGGCTGCCCTCCCGCACAGGGAACTGGGATaGTGGTGGCCAGTGCAGACA +
Preference number: 4 (lower is better)
Translates to: PTRGSLAFVVAVGRAALPHRELG*WWPVQT
Trigger: TGTCTGCACTGGCCACCACCATCCCAGTTCCCTGTG...CGGGAGGGCAGCCCTTCCGACAGCGACGACAAATGCCAATGAGCCCCTCGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp CCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTCTGGCCCCACAGGGAACTaGGATGGTGGTGGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: PGPRHLPGRFGHASACASGPTGN*DGGGQC
Trigger: GCACTGGCCACCACCATCCCAGTTCCCTGTGGGGCC...AGAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp ACCATGATGTCCTCCACACGCACCCGGTACTGCTGGTGGCGGCCCCAGCCGAGCAGGATGTGGGCAATCTaGCCTGTGAGCTCGAACACG +
Preference number: 4 (lower is better)
Translates to: TMMSSTRTRYCWWRPQPSRMWAI*PVSSNT
Trigger: CGTGTTCGAGCTCACAGGCCAGATTGCCCACATCCT...GCTCGGCTGGGGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp GGAATGAAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCGCACCCGGTACTGCTaGTGGCGGCCCCAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: GMKDAHSGLTGMASTILGRTRYC*WRPQPS
Trigger: GCTCGGCTGGGGCCGCCACCAGCAGTACCGGGTGCG...GCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTTCATTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GGCAGCCATGCTTTCACCCACCAGACGCCCAAATGCTGCTCCAATGACAAAGACCGCACCCGGTACTGCTaGTGGCGGCCCCAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: GSHAFTHQTPKCCSNDKDRTRYC*WRPQPS
Trigger: GCTCGGCTGGGGCCGCCACCAGCAGTACCGGGTGCG...GTCTTTGTCATTGGAGCAGCATTTGGGCGTCTGGTGGGTGAAAGCATGGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp TCGGCCCTTGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGTGCAGCTGAGCAGCTGAGGGCCACATaGGGAACATCCCGCACCATG +
Preference number: 4 (lower is better)
Translates to: SALGPVQCQTQVPEGAAEQLRAT*GTSRTM
Trigger: CATGGTGCGGGATGTTCCCCATGTGGCCCTCAGCTG...CTCAGCTGCACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp GGGCTGCAGACTCTGGGCGACAGCGTTGGCCAGGATGACGGCGATCATGACAGGCAGCTGAGGGCCACATaGGGAACATCCCGCACCATG +
Preference number: 4 (lower is better)
Translates to: GLQTLGDSVGQDDGDHDRQLRAT*GTSRTM
Trigger: CATGGTGCGGGATGTTCCCCATGTGGCCCTCAGCTG...CCTGTCATGATCGCCGTCATCCTGGCCAACGCTGTCGCCCAGAGTCTGCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp GGGCTCAGCTGGGCCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCCCAGCATTCGGCCCTTaGTCCTGTGCAGTGCCAAAC +
Preference number: 4 (lower is better)
Translates to: GLSWAPNNATTCERSMEPPAFGP*SCAVPN
Trigger: GTTTGGCACTGCACAGGACCAAGGGCCGAATGCTGG...GGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGCTGAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GCCACAGAAGAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGAGCCCAGCAGAATCATaGACTCAGGGGACTCCACTA +
Preference number: 4 (lower is better)
Translates to: ATEEAPEGDACRLCAPCGSPAES*TQGTPL
Trigger: TAGTGGAGTCCCCTGAGTCCATGATTCTGCTGGGCT...CCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430397.5
ENST00000637538.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGGTGGAGAGGTCTGGGTaGCTCTGCGCTCCTGCATGT +
Preference number: 4 (lower is better)
Translates to: AHSGLTGMASTILGHPRGVERSG*LCAPAC
Trigger: ACATGCAGGAGCGCAGAGCCACCCAGACCTCTCCAC...CCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGGATAGTGGAGAGGTCTaGGTGGCTCTGCGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: AHSGLTGMASTILGHPRGDSGEV*VALRSC
Trigger: GCAGGAGCGCAGAGCCACCCAGACCTCTCCACTATC...CCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GGGCTGCAGACTCTGGGCGACAGCGTTGGCCAGGATGACGGCGATCATGACAGGGATAGTGGAGAGGTCTaGGTGGCTCTGCGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GLQTLGDSVGQDDGDHDRDSGEV*VALRSC
Trigger: GCAGGAGCGCAGAGCCACCCAGACCTCTCCACTATC...CCTGTCATGATCGCCGTCATCCTGGCCAACGCTGTCGCCCAGAGTCTGCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGACTCTGCGCTCCCTGTaGGACTCTCTCCGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: AHSGLTGMASTILGHPRGTLRSL*DSLRGS
Trigger: GGAACCTCGGAGAGAGTCCCACAGGGAGCGCAGAGT...CCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GGGCTGCAGACTCTGGGCGACAGCGTTGGCCAGGATGACGGCGATCATGACAGGAGCAGCCTCAGGGGGTaGACTGCCACAGAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GLQTLGDSVGQDDGDHDRSSLRG*TATEEA
Trigger: AGCCTCTTCTGTGGCAGTCCACCCCCTGAGGCTGCT...CCTGTCATGATCGCCGTCATCCTGGCCAACGCTGTCGCCCAGAGTCTGCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR CCA 90 bp TTCAGGGCTCATCTCGCCTTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACCACTGTCTCGGAAGCTaGCGAGGGGCGGCCGGACTT +
Preference number: 4 (lower is better)
Translates to: FRAHLAFQVRVTCQGDSDHCLGS*RGAAGL
Trigger: AAGTCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTG...GTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAAGGCGAGATGAGCCCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp TCACTGCTGCTGGTGGCACTGTCTCGGAAGCTGGCGAGGGGCGGCCGGACTTTCTGTCACTGCTGCTGGTaGCACTGTCTCGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: SLLLVALSRKLARGGRTFCHCCW*HCLGSW
Trigger: CCAGCTTCCGAGACAGTGCCACCAGCAGCAGTGACA...GAAAGTCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTGCCACCAGCAGCAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GCTGGGGTGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGACCGTGTCACTGCTGCTaGTGGCACTGTCTCGGAAGC +
Preference number: 4 (lower is better)
Translates to: AGVQPPAVAASCLPKAEGPCHCC*WHCLGS
Trigger: GCTTCCGAGACAGTGCCACCAGCAGCAGTGACACGG...TCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCACCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCCACCAGGCCCTCCGTGTCACTGCTGCTaGTGGCACTGTCTCGGAAGC +
Preference number: 4 (lower is better)
Translates to: VGSRPVRCWVVLAPPPGPPCHCC*WHCLGS
Trigger: GCTTCCGAGACAGTGCCACCAGCAGCAGTGACACGG...AGGGCCTGGTGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp ACTGCCACAGAAGAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTCTCCAAGCCCTCCCTTaGGGCCCTCCGAGTTGTTAT +
Preference number: 4 (lower is better)
Translates to: TATEEAPEGDACRLCAPCLQALP*GPPSCY
Trigger: ATAACAACTCGGAGGGCCCCAAGGGAGGGCTTGGAG...ACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTGGCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636661.1
CDS-3UTR TCA 90 bp CAGCCTCAGGGGGTGGACTGCCACAGAAGAGGCTCCGGAGGGCGATGCCTGCCGCTGTGTGAATCCGGCTaGGAAAGTGATGAGGACAAC +
Preference number: 4 (lower is better)
Translates to: QPQGVDCHRRGSGGRCLPLCESG*ESDEDN
Trigger: GTTGTCCTCATCACTTTCTCAGCCGGATTCACACAG...CGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTGGCAGTCCACCCCCTGAGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp TCATGGACTCAGGGGACTCCACTAGGGCCAGCATTCGGCCCTTGGTCCTGTGCAAGGTCAGCGTGGAGATaGGCAGGGTCACCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: SWTQGTPLGPAFGPWSCARSAWR*AGSPEP
Trigger: CGGCTCTGGTGACCCTGCTCATCTCCACGCTGACCT...TGCACAGGACCAAGGGCCGAATGCTGGCCCTAGTGGAGTCCCCTGAGTCCATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR TCA 90 bp TTTGTCGTCGCTGTCGGAAGGGCTGCCCTCCCGGGGGAGGCCATGACGGGAGTGCAGCGTCTCTTTCTGTaGGAGCTGTCCAGCCATGAA +
Preference number: 4 (lower is better)
Translates to: FVVAVGRAALPGEAMTGVQRLFL*ELSSHE
Trigger: TTCATGGCTGGACAGCTCTCACAGAAAGAGACGCTG...CACTCCCGTCATGGCCTCCCCCGGGAGGGCAGCCCTTCCGACAGCGACGACAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp CCTCACCAGGGGACTCCACTAGGGCCAGCATTCGGCCCTTGGTCCTGTGCAGTGGGGCAATCTGGCCTGTaGGCTCGAACACGATCACAG +
Preference number: 4 (lower is better)
Translates to: PHQGTPLGPAFGPWSCAVGQSGL*ARTRSQ
Trigger: CTGTGATCGTGTTCGAGCTCACAGGCCAGATTGCCC...CACTGCACAGGACCAAGGGCCGAATGCTGGCCCTAGTGGAGTCCCCTGGTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636241.1
ENST00000636661.1
CDS-3UTR TCA 90 bp CGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCTTCCGGAGCTCCGAACATCCCGCACCATaGTGTCCTCCACACGCACCC +
Preference number: 4 (lower is better)
Translates to: RTFTPCAVTEPSMAFRSSEHPAP*CPPHAP
Trigger: GGGTGCGTGTGGAGGACATCATGGTGCGGGATGTTC...GGAGCTCCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp GCCACATGGGGAACATCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCGAACATCCCGCACCATaGTGTCCTCCACACGCACCC +
Preference number: 4 (lower is better)
Translates to: ATWGTSRTMMSSTRTRYCEHPAP*CPPHAP
Trigger: GGGTGCGTGTGGAGGACATCATGGTGCGGGATGTTC...GCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGATGTTCCCCATGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR TCA 90 bp GATGCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGACCCGGAAGGTGCAGCTaGGGGCCACATGGGGAACAT +
Preference number: 4 (lower is better)
Translates to: DAHSGLTGMASTILGHPRPGRCS*GPHGEH
Trigger: ATGTTCCCCATGTGGCCCTCAGCTGCACCTTCCGGG...TCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp CCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTCTCCCGGAAGGTGCAGCTaGGGGCCACATGGGGAACAT +
Preference number: 4 (lower is better)
Translates to: PGPRHLPGRFGHASACASPGRCS*GPHGEH
Trigger: ATGTTCCCCATGTGGCCCTCAGCTGCACCTTCCGGG...AGAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR TCA 90 bp GGCTCATCTCGCCTTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTCAATGCCACCACCTGTaGACGCTCGATGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: GSSRLPGPRHLPGRFGHAQCHHL*TLDGAQ
Trigger: CTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTG...AGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAAGGCGAGATGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR TCA 90 bp ACGGGAGTGGGGCCCCCAGAGTGCATGCACCTCAGTGGTCTCCGTGTCACTGCTGGCTGCTGGGAAGGCTaGGTCTTCTGTGTTCACCTG +
Preference number: 4 (lower is better)
Translates to: TGVGPPECMHLSGLRVTAGCWEG*VFCVHL
Trigger: CAGGTGAACACAGAAGACTCAGCCTTCCCAGCAGCC...AGCAGTGACACGGAGACCACTGAGGTGCATGCACTCTGGGGGCCCCACTCCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp TCGGCCCTTGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGTGCAGCTGAGGGCTGCTGGGAAGGCTaGGTCTTCTGTGTTCACCTG +
Preference number: 4 (lower is better)
Translates to: SALGPVQCQTQVPEGAAEGCWEG*VFCVHL
Trigger: CAGGTGAACACAGAAGACTCAGCCTTCCCAGCAGCC...CTCAGCTGCACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR TCA 90 bp CACATGGGGAACATCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCTGCACTGGGCCCCCTCTTaGGTGCAGGCTTTAGGGGCT +
Preference number: 4 (lower is better)
Translates to: HMGNIPHHDVLHTHPVLLHWAPS*VQALGA
Trigger: AGCCCCTAAAGCCTGCACTCAAGAGGGGGCCCAGTG...CAGCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGATGTTCCCCATGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR TCA 90 bp GGCCAGCATTCGGCCCTTGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGTATGCACATTCTGGGCTaGCGGGCATGGCTAGCACCA +
Preference number: 4 (lower is better)
Translates to: GQHSALGPVQCQTQVPEGMHILG*RAWLAP
Trigger: TGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCAT...ACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGAATGCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp CAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTCTCGGAGCAGGGGTCAAGTaGCCCCAACCCATCCTGCCA +
Preference number: 4 (lower is better)
Translates to: QVRVTCQGDSDTLQLALLGAGVK*PQPILP
Trigger: TGGCAGGATGGGTTGGGGTCACTTGACCCCTGCTCC...GAGAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp CTGGGAACCAGGCAGCCATGCTTTCACCCACCAGACGCCCAAATGCTGCTCCAACCCAGGCCTCCCAGGTaGTGGCAAGGGGAAGGACTC +
Preference number: 4 (lower is better)
Translates to: LGTRQPCFHPPDAQMLLQPRPPR*WQGEGL
Trigger: GAGTCCTTCCCCTTGCCATCACCTGGGAGGCCTGGG...TTGGAGCAGCATTTGGGCGTCTGGTGGGTGAAAGCATGGCTGCCTGGTTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638134.1
CDS-3UTR GCA 90 bp ATGAAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACGCCATCTCCGCGCACTaGCCTCTCGCCTCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: MKDAHSGLTGMASTILGHAISAH*PLASLG
Trigger: GCCGAGGGAGGCGAGAGGGCAGTGCGCGGAGATGGC...GTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
CDS-3UTR GCA 90 bp CCGAAGGCAGAAGGAATGAAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCGCCATCTCCGCGCACTaGCCTCTCGCCTCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: PKAEGMKDAHSGLTGMASAISAH*PLASLG
Trigger: GCCGAGGGAGGCGAGAGGGCAGTGCGCGGAGATGGC...GCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTCTGCCTTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
CDS-3UTR GCA 90 bp TGGGGTGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATAGGGTCTGCTCGTACTaGAGCGCCCGTGGCTCCATC +
Preference number: 4 (lower is better)
Translates to: WGAASSCSCLLPSEGRRNRVCSY*SARGSI
Trigger: GATGGAGCCACGGGCGCTGCAGTACGAGCAGACCCT...ATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
CDS-3UTR GCA 90 bp CTTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTCCCCGGGACATCCACTaGTGGGCTTGCAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: LPGPRHLPGRFGHASACAPRDIH*WACRQA
Trigger: TGCCTGTCTGCAAGCCCAGCAGTGGATGTCCCGGGG...AGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CTGGGCTCAGCTGGGCCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCGGTACTGGAGCAAGATaGTGGTGTTCAAGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: LGSAGPPTMPPPVNARWSGTGAR*WCSSPG
Trigger: CCCGGGGCTTGAACACCAGCATCTTGCTCCAGTACC...GCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGCTGAGCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000636180.1
ENST00000636241.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CGTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCCACCAGGGGTACTGGAGCAAGATaGTGGTGTTCAAGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: RGGFQACEVLGGSSSSTRGTGAR*WCSSPG
Trigger: CCCGGGGCTTGAACACCAGCATCTTGCTCCAGTACC...CCTGGTGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR GCA 90 bp GGGCTCAGCTGGGCCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCTCTTCATCTCAGGGATaGCAGAGCCGACAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GLSWAPNNATTCERSMEPSSSQG*QSRQPE
Trigger: CTCAGGCTGTCGGCTCTGGCATCCCTGAGATGAAGA...GGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGCTGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000636180.1
ENST00000636241.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CCGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCTTCCGGAGCTCGGAACCAGGCAGCCATaGTTTCACCCACCAGACGCC +
Preference number: 4 (lower is better)
Translates to: PDFHTLCCDRALDGLPELGTRQP*FHPPDA
Trigger: GGCGTCTGGTGGGTGAAAGCATGGCTGCCTGGTTCC...GAGCTCCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATGAAAGAGTGTGTCACCGCTCCTaGCAGCGCAGCTGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: AASSCSCLLPSEGRRNERVCHRS*QRSCPD
Trigger: GTCGGGGCAGCTGCGCTGGCAGGAGCGGTGACACAC...TCTTTCATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp AAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCAGTGTGTCACCGCTCCTaGCAGCGCAGCTGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: KDAHSGLTGMASTILGHPVCHRS*QRSCPD
Trigger: GTCGGGGCAGCTGCGCTGGCAGGAGCGGTGACACAC...TGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp AACATCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCTGGTGGCGGCCCTTGGTCCTGTGCAGTaGCAAACGCAGGTCCCGGAA +
Preference number: 4 (lower is better)
Translates to: NIPHHDVLHTHPVLLVAALGPVQ*QTQVPE
Trigger: TTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAG...GGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGATGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR GCA 90 bp GCACGTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCCACCCTTGGTCCTGTGCAGTaGCAAACGCAGGTCCCGGAA +
Preference number: 4 (lower is better)
Translates to: ARGGFQACEVLGGSSSSTLGPVQ*QTQVPE
Trigger: TTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAG...GGTGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACCACGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR GCA 90 bp AAGGCAGAAGGAATGAAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCACCCGCTCCTGCATGTGCTaGCGCCGGCGGGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: KAEGMKDAHSGLTGMASTRSCMC*RRRAGL
Trigger: GAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCG...GGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTCTGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CTTCCGAAGGCAGAAGGAATGAAAGATGCACATTCTGGGCTGACGGGCATGGCTCTGCGCTCCTGCATGTaGTGCCGCCGGCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LPKAEGMKDAHSGLTGMALRSCM*CRRRAG
Trigger: CCCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAG...AGCCATGCCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTCTGCCTTCGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp ATGAAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACGTGGCTCTGCGCTCCTaGATGTGCTGCCGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: MKDAHSGLTGMASTILGHVALRS*MCCRRR
Trigger: CCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCAC...GTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CTCTCTCCGAGGTTCCTGGTGACACTGGGCCCCCTCTTGAGTGCAGGCTTTAGGAGGTCTGGGTGGCTCTaGGCTCCTGCATGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LSPRFLVTLGPLLSAGFRRSGWL*APACAA
Trigger: GGCAGCACATGCAGGAGCGCAGAGCCACCCAGACCT...CCTAAAGCCTGCACTCAAGAGGGGGCCCAGTGTCACCAGGAACCTCGGAGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR GCA 90 bp TGGGGTGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATGATGCCTGCCGACTCTaGGCTCCCTGTGGGACTCTC +
Preference number: 4 (lower is better)
Translates to: WGAASSCSCLLPSEGRRNDACRL*APCGTL
Trigger: GAGAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATC...ATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp AAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACCGGAGGGCGATGCCTaGCGACTCTGCGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: KDAHSGLTGMASTILGHPPEGDA*RLCAPC
Trigger: ACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGG...TGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATGAAAGATGCAGGCTCCGGAGGGCGATaGCTGCCGACTCTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: PPAVAASCLPKAEGMKDAGSGGR*LPTLRS
Trigger: GGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCC...TGCATCTTTCATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GCTGGGGTGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGATCTCCGTGTCACTGCTaGTGGTGGCACTGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: AGVQPPAVAASCLPKAEGSPCHC*WWHCLG
Trigger: TCCGAGACAGTGCCACCAGCAGCAGTGACACGGAGA...TCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCACCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GATGCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGTGGGGCCCCCAGAGTaGATGCACCTCAGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: DAHSGLTGMASTILGHPRVGPPE*MHLSGL
Trigger: GAGACCACTGAGGTGCATGCACTCTGGGGGCCCCAC...TCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp TGGAGAGGTCTGGGTGGCTCTGCGCTCCTGCATGTGCTGCCGCCGGCGGGCTGGAGAAGGAATGAAAGATaGACATTCTGGGCTGACGGG +
Preference number: 4 (lower is better)
Translates to: WRGLGGSALLHVLPPAGWRRNER*TFWADG
Trigger: CCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTCT...CCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCACCCAGACCTCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGGCTGTAGCTGCCTCCTaGCTTCCGAAGGCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: AHSGLTGMASTILGHPRGAVAAS*LPKAEG
Trigger: TCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGC...CCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GGCTCATCTCGCCTTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTAAGAGGACGCCTCTTTaGCAAGCGGCATCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GSSRLPGPRHLPGRFGHAKRTPL*QAASRC
Trigger: GCAGCGGGATGCCGCTTGGCAAAGAGGCGTCCTCTT...AGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAAGGCGAGATGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636180.1
ENST00000636661.1
CDS-3UTR CCA 90 bp ATGAAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACGTTCCGGCTCTGTCCTaGACTCGGCTCCCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: MKDAHSGLTGMASTILGHVPALS*TRLPAR
Trigger: GCGGGCCGGGAGCCGAGTCCAGGACAGAGCCGGAAC...GTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
CDS-3UTR CCA 90 bp TGCTGCTGGTGGCACTGTCTCGGAAGCTGGCGAGGGGCGGCCGGACTTTCACACATATTCCAAGAGCTCTaGGGCAGCCCGAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: CCWWHCLGSWRGAAGLSHIFQEL*GSPRGR
Trigger: CCTTCCTCTCGGGCTGCCCCAGAGCTCTTGGAATAT...GTGTGAAAGTCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTGCCACCAGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636180.1
ENST00000636661.1
CDS-3UTR CCA 90 bp ACATCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCTGGTGGCGGCCCACCCAGGCCAGGTACTaGAGCAAGATGCTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: TSRTMMSSTRTRYCWWRPTQARY*SKMLVF
Trigger: GAACACCAGCATCTTGCTCCAGTACCTGGCCTGGGT...GGGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636241.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp TCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCTGGTGGCGGCCCCAGTGCTTCCGCATCACCTaGACAATCTTCCGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SRTMMSSTRTRYCWWRPQCFRIT*TIFRFR
Trigger: CCTGAACCGGAAGATTGTCCAGGTGATGCGGAAGCA...CTGGGGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp GAATCATGGACTCAGGGGACTCCACTAGGGCCAGCATTCGGCCCTTGGTCCTGTTCCTCCACCAGGCCCTaGCGGACCCACGTCCGATTG +
Preference number: 4 (lower is better)
Translates to: ESWTQGTPLGPAFGPWSCSSTRP*RTHVRL
Trigger: CAATCGGACGTGGGTCCGCCAGGGCCTGGTGGAGGA...ACAGGACCAAGGGCCGAATGCTGGCCCTAGTGGAGTCCCCTGAGTCCATGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp GCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGAGGCCTGTGAGGTGCTaGGTGGTTCTAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: AHSGLTGMASTILGHPRGRPVRC*VVLAPP
Trigger: TGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCT...CCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GGCCACCCACGAGGGGCTCATTGGCATTTGTCGTCGCTGTCGGAAGGGCTGCCCGAACTGGGATGGTGGTaGCCAGTGCAGACATCCAGA +
Preference number: 4 (lower is better)
Translates to: GHPRGAHWHLSSLSEGLPELGWW*PVQTSR
Trigger: TCTGGATGTCTGCACTGGCCACCACCATCCCAGTTC...GGGCAGCCCTTCCGACAGCGACGACAAATGCCAATGAGCCCCTCGTGGGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCCACCAGGCCCGAACTGGGATGGTGGTaGCCAGTGCAGACATCCAGA +
Preference number: 4 (lower is better)
Translates to: GGFQACEVLGGSSSSTRPELGWW*PVQTSR
Trigger: TCTGGATGTCTGCACTGGCCACCACCATCCCAGTTC...GGGCCTGGTGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636658.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp CGGCCCTTGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGTGCAGCTGAGGATGACAGGCAGGATGTaGGCAATCTGGCCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: RPLVLCSAKRRSRKVQLRMTGRM*AIWPVS
Trigger: GCTCACAGGCCAGATTGCCCACATCCTGCCTGTCAT...CCTCAGCTGCACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp TGCTGCTGGTGGCACTGTCTCGGAAGCTGGCGAGGGGCGGCCGGACTTTCACACATGACAGGCAGGATGTaGGCAATCTGGCCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: CCWWHCLGSWRGAAGLSHMTGRM*AIWPVS
Trigger: GCTCACAGGCCAGATTGCCCACATCCTGCCTGTCAT...GTGTGAAAGTCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTGCCACCAGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp CCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCAGCAGAATCATGGACACCCGGTACTGCTGGTaGCGGCCCCAGCCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: PNNATTCERSMEPSRIMDTRYCW*RPQPSS
Trigger: TGAGCTCGGCTGGGGCCGCCACCAGCAGTACCGGGT...GTCCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp CCCCGACCACAGCGTAGCCCCCAGGCACAATCCGGTAGGTGCTGCTGTCCGTATCCAGCATTCGGCCCTTaGTCCTGTGCAGTGCCAAAC +
Preference number: 4 (lower is better)
Translates to: PRPQRSPQAQSGRCCCPYPAFGP*SCAVPN
Trigger: GTTTGGCACTGCACAGGACCAAGGGCCGAATGCTGG...ATACGGACAGCAGCACCTACCGGATTGTGCCTGGGGGCTACGCTGTGGTCGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp GGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCCACCAGGCCCCCTGTGAACGCTCGATaGAGCCCAGCAGAATCATGG +
Preference number: 4 (lower is better)
Translates to: GGFQACEVLGGSSSSTRPPVNAR*SPAESW
Trigger: CCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGG...GGGCCTGGTGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp CACGTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCCACCAACTCTGCGCTCCCTGTaGGACTCTCTCCGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: HVVGSRPVRCWVVLAPPPTLRSL*DSLRGS
Trigger: GGAACCTCGGAGAGAGTCCCACAGGGAGCGCAGAGT...TGGTGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACCACGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GCTGGTCCATTCCCTTTGGAACCAAGGAGACTGGTCCTGAGCTCCCTGCCCCTTCACTGTCTCGGAAGCTaGCGAGGGGCGGCCGGACTT +
Preference number: 4 (lower is better)
Translates to: AGPFPLEPRRLVLSSLPLHCLGS*RGAAGL
Trigger: AAGTCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTG...AAGGGGCAGGGAGCTCAGGACCAGTCTCCTTGGTTCCAAAGGGAATGGACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636661.1
CDS-3UTR CCA 90 bp GCACGTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCCACCTGTCACTGCTGCTGGTaGCACTGTCTCGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: ARGGFQACEVLGGSSSSTCHCCW*HCLGSW
Trigger: CCAGCTTCCGAGACAGTGCCACCAGCAGCAGTGACA...GGTGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACCACGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp AACATCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCTGGTGGCGGCCTGTCACTGCTGCTGGTaGCACTGTCTCGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: NIPHHDVLHTHPVLLVAACHCCW*HCLGSW
Trigger: CCAGCTTCCGAGACAGTGCCACCAGCAGCAGTGACA...GGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGATGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GCTGGGGTGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAGTGCATGCACCTCAGTaGTCTCCGTGTCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: AGVQPPAVAASCLPKAEGVHAPQ*SPCHCC
Trigger: GCAGCAGTGACACGGAGACCACTGAGGTGCATGCAC...TCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCACCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCCACCAGGCCCACGAGGGGCTCATTaGCATTTGTCGTCGCTGTCG +
Preference number: 4 (lower is better)
Translates to: VVGSRPVRCWVVLAPPPGPRGAH*HLSSLS
Trigger: CGACAGCGACGACAAATGCCAATGAGCCCCTCGTGG...GCCTGGTGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GCTGGGGTGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGACCAGGTAGGATGAACTaGGAGAAGCTGGCACCCCAG +
Preference number: 4 (lower is better)
Translates to: AGVQPPAVAASCLPKAEGPGRMN*EKLAPQ
Trigger: CTGGGGTGCCAGCTTCTCCCAGTTCATCCTACCTGG...TCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCACCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp AGGGGCGGCCGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCTTCCCAGGTAGGATGAACTaGGAGAAGCTGGCACCCCAG +
Preference number: 4 (lower is better)
Translates to: RGGRTFTPCAVTEPSMAFPGRMN*EKLAPQ
Trigger: CTGGGGTGCCAGCTTCTCCCAGTTCATCCTACCTGG...GAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGGCCGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp CCTCACCAGGGGACTCCACTAGGGCCAGCATTCGGCCCTTGGTCCTGTGCAGTGCCAGGTAGGATGAACTaGGAGAAGCTGGCACCCCAG +
Preference number: 4 (lower is better)
Translates to: PHQGTPLGPAFGPWSCAVPGRMN*EKLAPQ
Trigger: CTGGGGTGCCAGCTTCTCCCAGTTCATCCTACCTGG...CACTGCACAGGACCAAGGGCCGAATGCTGGCCCTAGTGGAGTCCCCTGGTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636661.1
CDS-3UTR CCA 90 bp TGGCACGTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCCATGGGTGGCCAAGGGCTaGGTGGCCTCGCATATCTCA +
Preference number: 4 (lower is better)
Translates to: WHVVGSRPVRCWVVLAPPWVAKG*VASHIS
Trigger: TGAGATATGCGAGGCCACCCAGCCCTTGGCCACCCA...TGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACCACGTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475279.2
ENST00000636661.1
CDS-3UTR CCA 90 bp GTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCCACCAGGCACTGCAGGCAGGGGGTaGTTCAAAGGCGAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: VVGSRPVRCWVVLAPPPGTAGRG*FKGEEA
Trigger: AGCCTCTTCGCCTTTGAACCACCCCCTGCCTGCAGT...GCCTGGTGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638134.1
CDS-3UTR CCA 90 bp AAGACGTTGGCACGTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTGGCCAAGGGCTGGGTaGCCTCGCATATCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: KTLARGGFQACEVLGGSSWPRAG*PRISQG
Trigger: GCCCTGAGATATGCGAGGCCACCCAGCCCTTGGCCA...GCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACCACGTGCCAACGTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636661.1
CDS-3UTR CCA 90 bp CTTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTGCAGAATCATGGACTTaGTGGCGGCCCCAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: LPGPRHLPGRFGHASACAAESWT*WRPQPS
Trigger: GCTCGGCTGGGGCCGCCACCAAGTCCATGATTCTGC...AGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636180.1
CDS-3UTR TCA 90 bp GTGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATGAAACCAGAGCCGACAGCCTaGGGGGCCAGGATCTGTGTG +
Preference number: 4 (lower is better)
Translates to: VQPPAVAASCLPKAEGMKPEPTA*GARICV
Trigger: CACACAGATCCTGGCCCCTCAGGCTGTCGGCTCTGG...TTTCATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp AAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACCAGAGCCGACAGCCTaGGGGGCCAGGATCTGTGTG +
Preference number: 4 (lower is better)
Translates to: KDAHSGLTGMASTILGHPPEPTA*GARICV
Trigger: CACACAGATCCTGGCCCCTCAGGCTGTCGGCTCTGG...TGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp GGGCCCCCAGAGTGCATGCACCTCAGTGGTCTCCGTGTCACTGCTGCTGGTGGCCAGCGTCTCTTTCTGTaGGAGCTGTCCAGCCATGAA +
Preference number: 4 (lower is better)
Translates to: GPPECMHLSGLRVTAAGGQRLFL*ELSSHE
Trigger: TTCATGGCTGGACAGCTCTCACAGAAAGAGACGCTG...GCCACCAGCAGCAGTGACACGGAGACCACTGAGGTGCATGCACTCTGGGGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp TGCTGCTGGTGGCACTGTCTCGGAAGCTGGCGAGGGGCGGCCGGACTTTCACACGTGCTGCTGTCCGTATaGATTCCATCTGGGAACCAG +
Preference number: 4 (lower is better)
Translates to: CCWWHCLGSWRGAAGLSHVLLSV*IPSGNQ
Trigger: CTGGTTCCCAGATGGAATTCATACGGACAGCAGCAC...GTGTGAAAGTCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTGCCACCAGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp GTCAGCGTGGAGATGAGCAGGGTCACCAGAGCCGGGAAGAGCAGGCGTCTAGAGGGGCAATCTGGCCTGTaGGCTCGAACACGATCACAG +
Preference number: 4 (lower is better)
Translates to: VSVEMSRVTRAGKSRRLEGQSGL*ARTRSQ
Trigger: CTGTGATCGTGTTCGAGCTCACAGGCCAGATTGCCC...CTCTAGACGCCTGCTCTTCCCGGCTCTGGTGACCCTGCTCATCTCCACGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636661.1
CDS-3UTR TCA 90 bp TGGGGTGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATCAATGCCACCACCTGTaGACGCTCGATGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: WGAASSCSCLLPSEGRRNQCHHL*TLDGAQ
Trigger: CTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTG...ATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp GCGGCCCCAGCCGAGCTCAGGCAGGTAGGGCAGTTTCTTGATTCGGATGATGCTCAATGCCACCACCTGTaGACGCTCGATGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: AAPAELRQVGQFLDSDDAQCHHL*TLDGAQ
Trigger: CTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTG...AGCATCATCCGAATCAAGAAACTGCCCTACCTGCCTGAGCTCGGCTGGGGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR TCA 90 bp TTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTCACTGGGCCCCCTCTTaGGTGCAGGCTTTAGGGGCT +
Preference number: 4 (lower is better)
Translates to: FQVRVTCQGDSDTLQLALHWAPS*VQALGA
Trigger: AGCCCCTAAAGCCTGCACTCAAGAGGGGGCCCAGTG...AAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR TCA 90 bp GAAGCTGGCGAGGGGCGGCCGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCAGATTCCAGGTAGGATaGACTGGGAGAAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: EAGEGRPDFHTLCCDRALRFQVG*TGRSWH
Trigger: GTGCCAGCTTCTCCCAGTTCATCCTACCTGGAATCT...GAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGGCCGCCCCTCGCCAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp TGGCACGTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCCACCATACATCAGGGTCTaGTCGTACTGCAGCGCCCGT +
Preference number: 4 (lower is better)
Translates to: WHVVGSRPVRCWVVLAPPPYIRV*SYCSAR
Trigger: ACGGGCGCTGCAGTACGAGCAGACCCTGATGTATGG...TGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACCACGTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000638134.1
CDS-3UTR GCA 90 bp GCTGGGGTGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATCCACTGCTGGGCTTaGAGACAGGCAGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: AGVQPPAVAASCLPKAEGIHCWA*RQAAMA
Trigger: TGCCATTGCTGCCTGTCTGCAAGCCCAGCAGTGGAT...TCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCACCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CTGGGCTCAGCTGGGCCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCATCCACTGCTGGGCTTaGAGACAGGCAGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: LGSAGPPTMPPPVNARWSIHCWA*RQAAMA
Trigger: TGCCATTGCTGCCTGTCTGCAAGCCCAGCAGTGGAT...GCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGCTGAGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000636180.1
ENST00000636241.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGTCTTCATCTCAGGGATaGCAGAGCCGACAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: AHSGLTGMASTILGHPRGSSSQG*QSRQPE
Trigger: CTCAGGCTGTCGGCTCTGGCATCCCTGAGATGAAGA...CCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CCGAAGGCAGAAGGAATGAAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCCAAGCGGCATCCCGCTaGCTAGGGCGCAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: PKAEGMKDAHSGLTGMASQAASR*LGRRSA
Trigger: GGCTGACCTGCGCCCTAGGCAGCGGGATGCCGCTTG...GCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTCTGCCTTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CCTTCCGAAGGCAGAAGGAATGAAAGATGCACATTCTGGGCTGACGGGCATGGCCAAGCGGCATCCCGCTaGCTAGGGCGCAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: PSEGRRNERCTFWADGHGQAASR*LGRRSA
Trigger: GGCTGACCTGCGCCCTAGGCAGCGGGATGCCGCTTG...GCCATGCCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTCTGCCTTCGGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp ATGAAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCAAGCGGCATCCCGCTaGCTAGGGCGCAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: MKDAHSGLTGMASTILGHQAASR*LGRRSA
Trigger: GGCTGACCTGCGCCCTAGGCAGCGGGATGCCGCTTG...GTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GCCACATGGGGAACATCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCTCCAGGCCTGTGAGGTaGTGGGTGGTTCTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: ATWGTSRTMMSSTRTRYCSRPVR*WVVLAP
Trigger: AGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGA...GCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGATGTTCCCCATGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR GCA 90 bp GGGGTGGACTGCCACAGAAGAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCCAATCCGGTAGGTGCTaGTGTCCGTATGAATTCCAT +
Preference number: 4 (lower is better)
Translates to: GVDCHRRGSGGRCLPTLRQSGRC*CPYEFH
Trigger: ATGGAATTCATACGGACAGCAGCACCTACCGGATTG...GCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTGGCAGTCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR GCA 90 bp ACCATGATGTCCTCCACACGCACCCGGTACTGCTGGTGGCGGCCCCAGCCGAGCGCACAATCCGGTAGGTaGTGCTGTCCGTATGAATTC +
Preference number: 4 (lower is better)
Translates to: TMMSSTRTRYCWWRPQPSAQSGR*CCPYEF
Trigger: GAATTCATACGGACAGCAGCACCTACCGGATTGTGC...GCTCGGCTGGGGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR GCA 90 bp ATGAAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACGTGTGTCACCGCTCCTaGCAGCGCAGCTGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: MKDAHSGLTGMASTILGHVCHRS*QRSCPD
Trigger: GTCGGGGCAGCTGCGCTGGCAGGAGCGGTGACACAC...GTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCAGCAGAATCATGGACTGTGTGTCACCGCTCCTaGCAGCGCAGCTGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: PTMPPPVNARWSPAESWTVCHRS*QRSCPD
Trigger: GTCGGGGCAGCTGCGCTGGCAGGAGCGGTGACACAC...AGTCCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR GCA 90 bp GCTGGGCCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCAGCAGAACTTGGTCCTGTGCAGTaGCAAACGCAGGTCCCGGAA +
Preference number: 4 (lower is better)
Translates to: AGPPTMPPPVNARWSPAELGPVQ*QTQVPE
Trigger: TTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAG...TTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGGCTCATTGGCATCTTGGTCCTGTGCAGTaGCAAACGCAGGTCCCGGAA +
Preference number: 4 (lower is better)
Translates to: LTGMASTILGHPRGAHWHLGPVQ*QTQVPE
Trigger: TTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAG...ATGCCAATGAGCCCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GCAGAAGGAATGAAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCACCATCGTGGCTCTGCGCTCCTaGATGTGCTGCCGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: AEGMKDAHSGLTGMASTIVALRS*MCCRRR
Trigger: CCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCAC...GATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp TTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTGATGCCTGCCGACTCTaGGCTCCCTGTGGGACTCTC +
Preference number: 4 (lower is better)
Translates to: FQVRVTCQGDSDTLQLALDACRL*APCGTL
Trigger: GAGAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATC...AAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATGAAAGATGCACCGGAGGGCGATGCCTaGCGACTCTGCGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: PPAVAASCLPKAEGMKDAPEGDA*RLCAPC
Trigger: ACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGG...TGCATCTTTCATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CCGAAGGCAGAAGGAATGAAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCCCGGAGGGCGATGCCTaGCGACTCTGCGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: PKAEGMKDAHSGLTGMASPEGDA*RLCAPC
Trigger: ACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGG...GCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTCTGCCTTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp AGGCACAATCCGGTAGGTGCTGCTGTCCGTATGAATTCCATCTGGGAACCAGGCCCGGAGGGCGATGCCTaGCGACTCTGCGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: RHNPVGAAVRMNSIWEPGPEGDA*RLCAPC
Trigger: ACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGG...GCCTGGTTCCCAGATGGAATTCATACGGACAGCAGCACCTACCGGATTGTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp AAGGCAGAAGGAATGAAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCACCGGCTCCGGAGGGCGATaGCTGCCGACTCTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: KAEGMKDAHSGLTGMASTGSGGR*LPTLRS
Trigger: GGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCC...GGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTCTGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GGCTCATCTCGCCTTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCTCCGTGTCACTGCTaGTGGTGGCACTGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: GSSRLPGPRHLPGRFGHASPCHC*WWHCLG
Trigger: TCCGAGACAGTGCCACCAGCAGCAGTGACACGGAGA...AGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAAGGCGAGATGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp ATGCCACCACCTGTGAACGCTCGATGGAGCCCAGCAGAATCATGGACTCAGGGGGTGGGGCCCCCAGAGTaGATGCACCTCAGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: MPPPVNARWSPAESWTQGVGPPE*MHLSGL
Trigger: GAGACCACTGAGGTGCATGCACTCTGGGGGCCCCAC...CCCCTGAGTCCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000430397.5
ENST00000637909.1
CDS-3UTR GCA 90 bp TGCCTTCCGAAGGCAGAAGGAATGAAAGATGCACATTCTGGGCTGACGGGCATGCGCTGTCGGAAGGGCTaGCCTCCCGGGGGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: CLPKAEGMKDAHSGLTGMRCRKG*PPGGGH
Trigger: ATGGCCTCCCCCGGGAGGGCAGCCCTTCCGACAGCG...CATGCCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTCTGCCTTCGGAAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp AAGGCAGAAGGAATGAAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCACCCGCTGTCGGAAGGGCTaGCCTCCCGGGGGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: KAEGMKDAHSGLTGMASTRCRKG*PPGGGH
Trigger: ATGGCCTCCCCCGGGAGGGCAGCCCTTCCGACAGCG...GGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTCTGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GCCACATGGGGAACATCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCGCTGTAGCTGCCTCCTaGCTTCCGAAGGCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: ATWGTSRTMMSSTRTRYCAVAAS*LPKAEG
Trigger: TCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGC...GCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGATGTTCCCCATGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp TTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTGCCTCCAGCTGTAGCTaGCTCCTGCCTTCCGAAGGC +
Preference number: 4 (lower is better)
Translates to: FQVRVTCQGDSDTLQLALASSCS*LLPSEG
Trigger: GCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGC...AAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GGGCTCAGCTGGGCCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCCAGGGCCTATCTTCCTaGCTCTGGAAGACTTGTTGC +
Preference number: 4 (lower is better)
Translates to: GLSWAPNNATTCERSMEPQGLSS*LWKTCC
Trigger: GCAACAAGTCTTCCAGAGGCAGGAAGATAGGCCCTG...GGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGCTGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp ACATCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCTGGTGGCGGCCCCAGGGCCTATCTTCCTaGCTCTGGAAGACTTGTTGC +
Preference number: 4 (lower is better)
Translates to: TSRTMMSSTRTRYCWWRPQGLSS*LWKTCC
Trigger: GCAACAAGTCTTCCAGAGGCAGGAAGATAGGCCCTG...GGGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCCACCAGGCCCCAGGGCCTATCTTCCTaGCTCTGGAAGACTTGTTGC +
Preference number: 4 (lower is better)
Translates to: GGFQACEVLGGSSSSTRPQGLSS*LWKTCC
Trigger: GCAACAAGTCTTCCAGAGGCAGGAAGATAGGCCCTG...GGGCCTGGTGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp AAGACGTTGGCACGTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCAAGAGGACGCCTCTTTaGCAAGCGGCATCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: KTLARGGFQACEVLGGSSKRTPL*QAASRC
Trigger: GCAGCGGGATGCCGCTTGGCAAAGAGGCGTCCTCTT...GCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACCACGTGCCAACGTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636661.1
ENST00000638134.1
CDS-3UTR GCA 90 bp TCGGCCCTTGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGTGCAGCTGAGGCACTGCGTGGCAGGTaGTTAGAAGGGCAAGCTATG +
Preference number: 4 (lower is better)
Translates to: SALGPVQCQTQVPEGAAEALRGR*LEGQAM
Trigger: CATAGCTTGCCCTTCTAAGCACCTGCCACGCAGTGC...CTCAGCTGCACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638134.1
CDS-3UTR GCA 90 bp AGCCCCCAGGCACAATCCGGTAGGTGCTGCTGTCCGTATGAATTCCATCTGGGACCAGGAGGCGGAGGTTaGGGTGAGCCGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: SPQAQSGRCCCPYEFHLGPGGGG*GEPRSH
Trigger: GTGCGATCTCGGCTCACCGCAACCTCCGCCTCCTGG...TCCCAGATGGAATTCATACGGACAGCAGCACCTACCGGATTGTGCCTGGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp TCGCCTTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCACCAGACGCCCAAATaGTGCTCCTTCAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SPSRSASLAREIRTRFSLHQTPK*CSFREG
Trigger: CCCCTCCCTGAAGGAGCAGCATTTGGGCGTCTGGTG...CAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAAGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636180.1
CDS-3UTR CCA 90 bp GCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGGAGCAGCTTCCTCTTTaGCAAAGGCCCCAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: AHSGLTGMASTILGHPRGEQLPL*QRPQGP
Trigger: AGGACCTTGGGGCCTTTGCCAAAGAGGAAGCTGCTC...CCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
CDS-3UTR CCA 90 bp GGCCAGCATTCGGCCCTTGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGTATATTCCAAGAGCTCTaGGGCAGCCCGAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GQHSALGPVQCQTQVPEGIFQEL*GSPRGR
Trigger: CCTTCCTCTCGGGCTGCCCCAGAGCTCTTGGAATAT...ACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGAATGCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636241.1
ENST00000636661.1
ENST00000638134.1
CDS-3UTR CCA 90 bp CCCCGACCACAGCGTAGCCCCCAGGCACAATCCGGTAGGTGCTGCTGTCCGTATACCCAGGCCAGGTACTaGAGCAAGATGCTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: PRPQRSPQAQSGRCCCPYTQARY*SKMLVF
Trigger: GAACACCAGCATCTTGCTCCAGTACCTGGCCTGGGT...ATACGGACAGCAGCACCTACCGGATTGTGCCTGGGGGCTACGCTGTGGTCGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp AGCTCCTCCACCAGGCCCTGGCGGACCCACGTCCGATTGTCAAACAGGGTGACCACCCAGGCCAGGTACTaGAGCAAGATGCTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: SSSTRPWRTHVRLSNRVTTQARY*SKMLVF
Trigger: GAACACCAGCATCTTGCTCCAGTACCTGGCCTGGGT...GGTCACCCTGTTTGACAATCGGACGTGGGTCCGCCAGGGCCTGGTGGAGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp ACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCTTCCGGAGCTCCTTTTCCTCCACCAGGCCCTaGCGGACCCACGTCCGATTG +
Preference number: 4 (lower is better)
Translates to: TFTPCAVTEPSMAFRSSFSSTRP*RTHVRL
Trigger: CAATCGGACGTGGGTCCGCCAGGGCCTGGTGGAGGA...AAAGGAGCTCCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp CACGTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCCACCAAGGCCTGTGAGGTGCTaGGTGGTTCTAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: HVVGSRPVRCWVVLAPPPRPVRC*VVLAPP
Trigger: TGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCT...TGGTGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACCACGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636658.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp GCCACATGGGGAACATCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCAGGCCTGTGAGGTGCTaGGTGGTTCTAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ATWGTSRTMMSSTRTRYCRPVRC*VVLAPP
Trigger: TGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCT...GCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGATGTTCCCCATGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp GCTGGGGTGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAGAACTGGGATGGTGGTaGCCAGTGCAGACATCCAGA +
Preference number: 4 (lower is better)
Translates to: AGVQPPAVAASCLPKAEGELGWW*PVQTSR
Trigger: TCTGGATGTCTGCACTGGCCACCACCATCCCAGTTC...TCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCACCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GGCCGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGGCCTTCCGGAGCGAACTGGGATGGTGGTaGCCAGTGCAGACATCCAGA +
Preference number: 4 (lower is better)
Translates to: GRTFTPCAVTEPSMAFRSELGWW*PVQTSR
Trigger: TCTGGATGTCTGCACTGGCCACCACCATCCCAGTTC...GCTCCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp CACGTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCCACCACACAGGGAACTGGGATaGTGGTGGCCAGTGCAGACA +
Preference number: 4 (lower is better)
Translates to: HVVGSRPVRCWVVLAPPPHRELG*WWPVQT
Trigger: TGTCTGCACTGGCCACCACCATCCCAGTTCCCTGTG...TGGTGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACCACGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636658.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp CGTTGGCACGTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCACAGGGAACTGGGATaGTGGTGGCCAGTGCAGACA +
Preference number: 4 (lower is better)
Translates to: RWHVVGSRPVRCWVVLAPHRELG*WWPVQT
Trigger: TGTCTGCACTGGCCACCACCATCCCAGTTCCCTGTG...AGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACCACGTGCCAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636658.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp AAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCAGGCCCCACAGGGAACTaGGATGGTGGTGGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: KDAHSGLTGMASTILGHPGPTGN*DGGGQC
Trigger: GCACTGGCCACCACCATCCCAGTTCCCTGTGGGGCC...TGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATGAAAGAGGCCCCACAGGGAACTaGGATGGTGGTGGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: AASSCSCLLPSEGRRNERGPTGN*DGGGQC
Trigger: GCACTGGCCACCACCATCCCAGTTCCCTGTGGGGCC...TCTTTCATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp TGGCGGACCCACGTCCGATTGTCAAACAGGGTGACCAGCGTCTCTTTCTGTGAGGGCCCCACAGGGAACTaGGATGGTGGTGGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: WRTHVRLSNRVTSVSFCEGPTGN*DGGGQC
Trigger: GCACTGGCCACCACCATCCCAGTTCCCTGTGGGGCC...CTCACAGAAAGAGACGCTGGTCACCCTGTTTGACAATCGGACGTGGGTCCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp GCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGACACGATCACAGCCGTaGACACTGTGTGTGTCACCG +
Preference number: 4 (lower is better)
Translates to: AHSGLTGMASTILGHPRGTRSQP*TLCVSP
Trigger: CGGTGACACACACAGTGTCCACGGCTGTGATCGTGT...CCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp CACCAGGGGACTCCACTAGGGCCAGCATTCGGCCCTTGGTCCTGTGCAGTGCCAACACGATCACAGCCGTaGACACTGTGTGTGTCACCG +
Preference number: 4 (lower is better)
Translates to: HQGTPLGPAFGPWSCAVPTRSQP*TLCVSP
Trigger: CGGTGACACACACAGTGTCCACGGCTGTGATCGTGT...TGGCACTGCACAGGACCAAGGGCCGAATGCTGGCCCTAGTGGAGTCCCCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636241.1
ENST00000636661.1
CDS-3UTR CCA 90 bp GCTGGGGTGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAAGGATGTGGGCAATCTaGCCTGTGAGCTCGAACACG +
Preference number: 4 (lower is better)
Translates to: AGVQPPAVAASCLPKAEGRMWAI*PVSSNT
Trigger: CGTGTTCGAGCTCACAGGCCAGATTGCCCACATCCT...TCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCACCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp CTCCACCAGGCCCTGGCGGACCCACGTCCGATTGTCAAACAGGGTGACCAGCGTAGGATGTGGGCAATCTaGCCTGTGAGCTCGAACACG +
Preference number: 4 (lower is better)
Translates to: LHQALADPRPIVKQGDQRRMWAI*PVSSNT
Trigger: CGTGTTCGAGCTCACAGGCCAGATTGCCCACATCCT...ACGCTGGTCACCCTGTTTGACAATCGGACGTGGGTCCGCCAGGGCCTGGTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp CTCCTCCACCAGGCCCTGGCGGACCCACGTCCGATTGTCAAACAGGGTGACCAGAGGATGTGGGCAATCTaGCCTGTGAGCTCGAACACG +
Preference number: 4 (lower is better)
Translates to: LLHQALADPRPIVKQGDQRMWAI*PVSSNT
Trigger: CGTGTTCGAGCTCACAGGCCAGATTGCCCACATCCT...CTGGTCACCCTGTTTGACAATCGGACGTGGGTCCGCCAGGGCCTGGTGGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp TCGGCCCTTGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGTGCAGCTGAGAGGATGTGGGCAATCTaGCCTGTGAGCTCGAACACG +
Preference number: 4 (lower is better)
Translates to: SALGPVQCQTQVPEGAAERMWAI*PVSSNT
Trigger: CGTGTTCGAGCTCACAGGCCAGATTGCCCACATCCT...CTCAGCTGCACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp GCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGATGACAGGCAGGATGTaGGCAATCTGGCCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: AHSGLTGMASTILGHPRGMTGRM*AIWPVS
Trigger: GCTCACAGGCCAGATTGCCCACATCCTGCCTGTCAT...CCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCCACCAGGCCCTATGACAGGCAGGATGTaGGCAATCTGGCCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: VGSRPVRCWVVLAPPPGPMTGRM*AIWPVS
Trigger: GCTCACAGGCCAGATTGCCCACATCCTGCCTGTCAT...AGGGCCTGGTGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp CCTTCCGAAGGCAGAAGGAATGAAAGATGCACATTCTGGGCTGACGGGCATGGCACCCGGTACTGCTGGTaGCGGCCCCAGCCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: PSEGRRNERCTFWADGHGTRYCW*RPQPSS
Trigger: TGAGCTCGGCTGGGGCCGCCACCAGCAGTACCGGGT...GCCATGCCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTCTGCCTTCGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GAAGGAATGAAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTACGCACCCGGTACTGCTaGTGGCGGCCCCAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: EGMKDAHSGLTGMASTILRTRYC*WRPQPS
Trigger: GCTCGGCTGGGGCCGCCACCAGCAGTACCGGGTGCG...TAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GCGGCCCCAGCCGAGCTCAGGCAGGTAGGGCAGTTTCTTGATTCGGATGATGCTCAGCTGAGGGCCACATaGGGAACATCCCGCACCATG +
Preference number: 4 (lower is better)
Translates to: AAPAELRQVGQFLDSDDAQLRAT*GTSRTM
Trigger: CATGGTGCGGGATGTTCCCCATGTGGCCCTCAGCTG...AGCATCATCCGAATCAAGAAACTGCCCTACCTGCCTGAGCTCGGCTGGGGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp CTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGGCTCATTGGCATCCAGCATTCGGCCCTTaGTCCTGTGCAGTGCCAAAC +
Preference number: 4 (lower is better)
Translates to: LTGMASTILGHPRGAHWHPAFGP*SCAVPN
Trigger: GTTTGGCACTGCACAGGACCAAGGGCCGAATGCTGG...ATGCCAATGAGCCCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp ATTTGTCGTCGCTGTCGGAAGGGCTGCCCTCCCGGGGGAGGCCATGACGGGAGTAGCCCAGCAGAATCATaGACTCAGGGGACTCCACTA +
Preference number: 4 (lower is better)
Translates to: ICRRCRKGCPPGGGHDGSSPAES*TQGTPL
Trigger: TAGTGGAGTCCCCTGAGTCCATGATTCTGCTGGGCT...ACTCCCGTCATGGCCTCCCCCGGGAGGGCAGCCCTTCCGACAGCGACGACAAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430397.5
ENST00000637909.1
CDS-3UTR CCA 90 bp GCTGGGGTGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGACCTGTGAACGCTCGATaGAGCCCAGCAGAATCATGG +
Preference number: 4 (lower is better)
Translates to: AGVQPPAVAASCLPKAEGPVNAR*SPAESW
Trigger: CCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGG...TCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCACCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp AAGACGTTGGCACGTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCGATAGTGGAGAGGTCTaGGTGGCTCTGCGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: KTLARGGFQACEVLGGSSDSGEV*VALRSC
Trigger: GCAGGAGCGCAGAGCCACCCAGACCTCTCCACTATC...GCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACCACGTGCCAACGTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp TGGGGTGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATACTCTGCGCTCCCTGTaGGACTCTCTCCGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: WGAASSCSCLLPSEGRRNTLRSL*DSLRGS
Trigger: GGAACCTCGGAGAGAGTCCCACAGGGAGCGCAGAGT...ATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp TCATGGACTCAGGGGACTCCACTAGGGCCAGCATTCGGCCCTTGGTCCTGTGCAACTCTGCGCTCCCTGTaGGACTCTCTCCGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: SWTQGTPLGPAFGPWSCATLRSL*DSLRGS
Trigger: GGAACCTCGGAGAGAGTCCCACAGGGAGCGCAGAGT...TGCACAGGACCAAGGGCCGAATGCTGGCCCTAGTGGAGTCCCCTGAGTCCATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430397.5
ENST00000637538.1
ENST00000637909.1
CDS-3UTR CCA 90 bp CTTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTACTCTGCGCTCCCTGTaGGACTCTCTCCGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: LPGPRHLPGRFGHASACATLRSL*DSLRGS
Trigger: GGAACCTCGGAGAGAGTCCCACAGGGAGCGCAGAGT...AGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR CCA 90 bp TCATGGACTCAGGGGACTCCACTAGGGCCAGCATTCGGCCCTTGGTCCTGTGCAAGCAGCCTCAGGGGGTaGACTGCCACAGAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: SWTQGTPLGPAFGPWSCASSLRG*TATEEA
Trigger: AGCCTCTTCTGTGGCAGTCCACCCCCTGAGGCTGCT...TGCACAGGACCAAGGGCCGAATGCTGGCCCTAGTGGAGTCCCCTGAGTCCATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430397.5
ENST00000637538.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GCACGTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCCACCGTCCGCTCCACCAGCTaGAAGGGAGCAGGATCAATT +
Preference number: 4 (lower is better)
Translates to: ARGGFQACEVLGGSSSSTVRSTS*KGAGSI
Trigger: AATTGATCCTGCTCCCTTCCAGCTGGTGGAGCGGAC...GGTGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACCACGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp TGGGTAGTGGGTCAGATTCCAGGTAGGATGAACTGGGAGAAGCTGGCACCCCAGCACTGTCTCGGAAGCTaGCGAGGGGCGGCCGGACTT +
Preference number: 4 (lower is better)
Translates to: WVVGQIPGRMNWEKLAPQHCLGS*RGAAGL
Trigger: AAGTCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTG...CTGGGGTGCCAGCTTCTCCCAGTTCATCCTACCTGGAATCTGACCCACTACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp CCTTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTGTCACTGCTGCTGGTaGCACTGTCTCGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: PSRSASLAREIRTRFSLRCHCCW*HCLGSW
Trigger: CCAGCTTCCGAGACAGTGCCACCAGCAGCAGTGACA...GCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp CCTAGGCCACCCACGAGGGGCTCATTGGCATTTGTCGTCGCTGTCGGAAGGGCTCCAGGTAGGATGAACTaGGAGAAGCTGGCACCCCAG +
Preference number: 4 (lower is better)
Translates to: PRPPTRGSLAFVVAVGRAPGRMN*EKLAPQ
Trigger: CTGGGGTGCCAGCTTCTCCCAGTTCATCCTACCTGG...AGCCCTTCCGACAGCGACGACAAATGCCAATGAGCCCCTCGTGGGTGGCCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp ACCATGATGTCCTCCACACGCACCCGGTACTGCTGGTGGCGGCCCCAGCCGAGCCTATCTTCCTGCCTCTaGAAGACTTGTTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: TMMSSTRTRYCWWRPQPSLSSCL*KTCCRW
Trigger: CCACCTGCAACAAGTCTTCCAGAGGCAGGAAGATAG...GCTCGGCTGGGGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GCCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCAGCAGAATCATGCACATCAGTCGTGGGTaGCCAAGGGCTGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: APNNATTCERSMEPSRIMHISRG*PRAGWP
Trigger: AGGCCACCCAGCCCTTGGCCACCCACGACTGATGTG...CATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636661.1
CDS-3UTR CCA 90 bp ACATCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCTGGTGGCGGCCCCTGGTCCATTCCCTTTaGAACCAAGGAGACTGGTCC +
Preference number: 4 (lower is better)
Translates to: TSRTMMSSTRTRYCWWRPLVHSL*NQGDWS
Trigger: GGACCAGTCTCCTTGGTTCCAAAGGGAATGGACCAG...GGGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636241.1
ENST00000636661.1
CDS-3UTR CCA 90 bp TCGGCCCTTGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGTGCAGCTGAGCCACCTGGCAAGTGCTaGTCCATTCCCTTTGGAACC +
Preference number: 4 (lower is better)
Translates to: SALGPVQCQTQVPEGAAEPPGKC*SIPFGT
Trigger: GGTTCCAAAGGGAATGGACCAGCACTTGCCAGGTGG...CTCAGCTGCACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636241.1
CDS-3UTR CCA 90 bp GGGCCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCAGCAGAATCATTTGGGAGGCCAAGGTaGGCAGACCTGAGGTCGGGA +
Preference number: 4 (lower is better)
Translates to: GPPTMPPPVNARWSPAESFGRPR*ADLRSG
Trigger: TCCCGACCTCAGGTCTGCCCACCTTGGCCTCCCAAA...TGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636661.1
3UTR CAA 72 bp AGCTCCTCCACCAGGCCCTGGCGGACCCACGTCCGATaGTCAAACAGGGTGACCAGCGTCTCTTTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: SSSTRPWRTHVR*SNRVTSVSFCE
Trigger: CTCACAGAAAGAGACGCTGGTCACCCTGTTTGACAATCGGACGTGGGTCCGCCAGGGCCTGGTGGAGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
3UTR CAA 72 bp GTCCATCCTCCAAGCCCTCCCTTGGGGCCCTCCGAGTaGTTATTCCACCCTCCACCCTCAGAAGCCCATCAG +
Preference number: 4 (lower is better)
Translates to: VHPPSPPLGPSE*LFHPPPSEAHQ
Trigger: CTGATGGGCTTCTGAGGGTGGAGGGTGGAATAACAACTCGGAGGGCCCCAAGGGAGGGCTTGGAGGATGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636661.1
CDS-3UTR TCA 90 bp GATGCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAAAGGCCCCAAGGTCCTaGGTGTACCGGCCATACATC +
Preference number: 4 (lower is better)
Translates to: DAHSGLTGMASTILGHPRKAPRS*VYRPYI
Trigger: GATGTATGGCCGGTACACTCAGGACCTTGGGGCCTT...TCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
CDS-3UTR TCA 90 bp CTGGCGAGGGGCGGCCGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGCTGTGTGAATCCGGCTaGGAAAGTGATGAGGACAAC +
Preference number: 4 (lower is better)
Translates to: LARGGRTFTPCAVTEPSMLCESG*ESDEDN
Trigger: GTTGTCCTCATCACTTTCTCAGCCGGATTCACACAG...CATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGGCCGCCCCTCGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp CCGAAGGCAGAAGGAATGAAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCCCAGAGCCGACAGCCTaGGGGGCCAGGATCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PKAEGMKDAHSGLTGMASPEPTA*GARICV
Trigger: CACACAGATCCTGGCCCCTCAGGCTGTCGGCTCTGG...GCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTCTGCCTTCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp TGGGAACCAGGCAGCCATGCTTTCACCCACCAGACGCCCAAATGCTGCTCCAATAGGTCAGCGTGGAGATaGGCAGGGTCACCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: WEPGSHAFTHQTPKCCSNRSAWR*AGSPEP
Trigger: CGGCTCTGGTGACCCTGCTCATCTCCACGCTGACCT...ATTGGAGCAGCATTTGGGCGTCTGGTGGGTGAAAGCATGGCTGCCTGGTTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475279.2
ENST00000636658.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR TCA 90 bp GGCAATCTGGCCTGTGAGCTCGAACACGATCACAGCCGTGGACACTGTGTGTGTAGGTCAGCGTGGAGATaGGCAGGGTCACCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: GNLACELEHDHSRGHCVCRSAWR*AGSPEP
Trigger: CGGCTCTGGTGACCCTGCTCATCTCCACGCTGACCT...ACACACACAGTGTCCACGGCTGTGATCGTGTTCGAGCTCACAGGCCAGATTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR TCA 90 bp CTCCACCAGGCCCTGGCGGACCCACGTCCGATTGTCAAACAGGGTGACCAGCGTCAGCGTCTCTTTCTGTaGGAGCTGTCCAGCCATGAA +
Preference number: 4 (lower is better)
Translates to: LHQALADPRPIVKQGDQRQRLFL*ELSSHE
Trigger: TTCATGGCTGGACAGCTCTCACAGAAAGAGACGCTG...ACGCTGGTCACCCTGTTTGACAATCGGACGTGGGTCCGCCAGGGCCTGGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR TCA 90 bp CTGGGCTCAGCTGGGCCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCAGCGTCTCTTTCTGTaGGAGCTGTCCAGCCATGAA +
Preference number: 4 (lower is better)
Translates to: LGSAGPPTMPPPVNARWSQRLFL*ELSSHE
Trigger: TTCATGGCTGGACAGCTCTCACAGAAAGAGACGCTG...GCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGCTGAGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR TCA 90 bp GGGCTCAGCTGGGCCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCGATTGTCAAACAGGGTaGCCAGCGTCTCTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: GLSWAPNNATTCERSMEPDCQTG*PASLSV
Trigger: CACAGAAAGAGACGCTGGTCACCCTGTTTGACAATC...GGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGCTGAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR TCA 90 bp CTCCACCAGGCCCTGGCGGACCCACGTCCGATTGTCAAACAGGGTGACCAGCGTGTGCTGCTGTCCGTATaGATTCCATCTGGGAACCAG +
Preference number: 4 (lower is better)
Translates to: LHQALADPRPIVKQGDQRVLLSV*IPSGNQ
Trigger: CTGGTTCCCAGATGGAATTCATACGGACAGCAGCAC...ACGCTGGTCACCCTGTTTGACAATCGGACGTGGGTCCGCCAGGGCCTGGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR TCA 90 bp GCGGCCCCAGCCGAGCTCAGGCAGGTAGGGCAGTTTCTTGATTCGGATGATGCTGGGCAATCTGGCCTGTaGGCTCGAACACGATCACAG +
Preference number: 4 (lower is better)
Translates to: AAPAELRQVGQFLDSDDAGQSGL*ARTRSQ
Trigger: CTGTGATCGTGTTCGAGCTCACAGGCCAGATTGCCC...AGCATCATCCGAATCAAGAAACTGCCCTACCTGCCTGAGCTCGGCTGGGGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR TCA 90 bp TTCCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTGAACATCCCGCACCATaGTGTCCTCCACACGCACCC +
Preference number: 4 (lower is better)
Translates to: FQVRVTCQGDSDTLQLALEHPAP*CPPHAP
Trigger: GGGTGCGTGTGGAGGACATCATGGTGCGGGATGTTC...AAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR TCA 90 bp AGGTGGGTAGTGGGTCAGATTCCAGGTAGGATGAACTGGGAGAAGCTGGCACCCCCCGGAAGGTGCAGCTaGGGGCCACATGGGGAACAT +
Preference number: 4 (lower is better)
Translates to: RWVVGQIPGRMNWEKLAPPGRCS*GPHGEH
Trigger: ATGTTCCCCATGTGGCCCTCAGCTGCACCTTCCGGG...GGGTGCCAGCTTCTCCCAGTTCATCCTACCTGGAATCTGACCCACTACCCACCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp TGGGAACCAGGCAGCCATGCTTTCACCCACCAGACGCCCAAATGCTGCTCCAATCCCGGAAGGTGCAGCTaGGGGCCACATGGGGAACAT +
Preference number: 4 (lower is better)
Translates to: WEPGSHAFTHQTPKCCSNPGRCS*GPHGEH
Trigger: ATGTTCCCCATGTGGCCCTCAGCTGCACCTTCCGGG...ATTGGAGCAGCATTTGGGCGTCTGGTGGGTGAAAGCATGGCTGCCTGGTTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR TCA 90 bp CCAGGTCCGCGTCACTTGCCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTCTGGCTGCTGGGAAGGCTaGGTCTTCTGTGTTCACCTG +
Preference number: 4 (lower is better)
Translates to: PGPRHLPGRFGHASACASGCWEG*VFCVHL
Trigger: CAGGTGAACACAGAAGACTCAGCCTTCCCAGCAGCC...AGAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR TCA 90 bp GCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATGAAAGATGCCACTGGGCCCCCTCTTaGGTGCAGGCTTTAGGGGCT +
Preference number: 4 (lower is better)
Translates to: ASSCSCLLPSEGRRNERCHWAPS*VQALGA
Trigger: AGCCCCTAAAGCCTGCACTCAAGAGGGGGCCCAGTG...GCATCTTTCATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp GCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATGAAAGACACTGGGCCCCCTCTTaGGTGCAGGCTTTAGGGGCT +
Preference number: 4 (lower is better)
Translates to: AASSCSCLLPSEGRRNERHWAPS*VQALGA
Trigger: AGCCCCTAAAGCCTGCACTCAAGAGGGGGCCCAGTG...TCTTTCATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp CTGGCGAGGGGCGGCCGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCGATGGTCTGCCAATACTGGTaGCATAAGCATGGTCCACTC +
Preference number: 4 (lower is better)
Translates to: LARGGRTFTPCAVTEPSMVCQYW*HKHGPL
Trigger: GAGTGGACCATGCTTATGTCACCAGTATTGGCAGAC...CATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGGCCGCCCCTCGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp GCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGAGATTCCAGGTAGGATaGACTGGGAGAAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: AHSGLTGMASTILGHPRGRFQVG*TGRSWH
Trigger: GTGCCAGCTTCTCCCAGTTCATCCTACCTGGAATCT...CCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp AGGTGGGTAGTGGGTCAGATTCCAGGTAGGATGAACTGGGAGAAGCTGGCACCCGGAGCAGGGGTCAAGTaGCCCCAACCCATCCTGCCA +
Preference number: 4 (lower is better)
Translates to: RWVVGQIPGRMNWEKLAPGAGVK*PQPILP
Trigger: TGGCAGGATGGGTTGGGGTCACTTGACCCCTGCTCC...GGGTGCCAGCTTCTCCCAGTTCATCCTACCTGGAATCTGACCCACTACCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp TTTGTCGTCGCTGTCGGAAGGGCTGCCCTCCCGGGGGAGGCCATGACGGGAGTGAGTGAGAAGATAGTGTaGGTCTCTTCAGGGCTCATC +
Preference number: 4 (lower is better)
Translates to: FVVAVGRAALPGEAMTGVSEKIV*VSSGLI
Trigger: GATGAGCCCTGAAGAGACTCACACTATCTTCTCACT...CACTCCCGTCATGGCCTCCCCCGGGAGGGCAGCCCTTCCGACAGCGACGACAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430397.5
CDS-3UTR GCA 90 bp GATGCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGACCATACATCAGGGTCTaGTCGTACTGCAGCGCCCGT +
Preference number: 4 (lower is better)
Translates to: DAHSGLTGMASTILGHPRPYIRV*SYCSAR
Trigger: ACGGGCGCTGCAGTACGAGCAGACCCTGATGTATGG...TCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
CDS-3UTR GCA 90 bp ATTCGGCCCTTGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGTGCAGCTGATCCACTGCTGGGCTTaGAGACAGGCAGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: IRPLVLCSAKRRSRKVQLIHCWA*RQAAMA
Trigger: TGCCATTGCTGCCTGTCTGCAAGCCCAGCAGTGGAT...CAGCTGCACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636241.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR GCA 90 bp AAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACCCCGGGACATCCACTaGTGGGCTTGCAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: KDAHSGLTGMASTILGHPPRDIH*WACRQA
Trigger: TGCCTGTCTGCAAGCCCAGCAGTGGATGTCCCGGGG...TGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp AGACGTTGGCACGTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTGGTACTGGAGCAAGATaGTGGTGTTCAAGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: RRWHVVGSRPVRCWVVLAGTGAR*WCSSPG
Trigger: CCCGGGGCTTGAACACCAGCATCTTGCTCCAGTACC...AGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACCACGTGCCAACGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR GCA 90 bp TGCAGACTCTGGGCGACAGCGTTGGCCAGGATGACGGCGATCATGACAGGCAGGTCTTCATCTCAGGGATaGCAGAGCCGACAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: CRLWATALARMTAIMTGRSSSQG*QSRQPE
Trigger: CTCAGGCTGTCGGCTCTGGCATCCCTGAGATGAAGA...CCTGCCTGTCATGATCGCCGTCATCCTGGCCAACGCTGTCGCCCAGAGTCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000636180.1
ENST00000636241.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR GCA 90 bp GCAGAAGGAATGAAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCAAGCGGCATCCCGCTaGCTAGGGCGCAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: AEGMKDAHSGLTGMASTIQAASR*LGRRSA
Trigger: GGCTGACCTGCGCCCTAGGCAGCGGGATGCCGCTTG...GATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CCAGGGAGATTCGGACACGCTTCAGCTTGCGCTTCTCACAGGATTCCAACTTCTCAAGCGGCATCCCGCTaGCTAGGGCGCAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: PGRFGHASACASHRIPTSQAASR*LGRRSA
Trigger: GGCTGACCTGCGCCCTAGGCAGCGGGATGCCGCTTG...AGAAGTTGGAATCCTGTGAGAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CTTCGAGGAGTGAGCACTGCGTGGCAGGTGCTTAGAAGGGCAAGCTATGTAAAGCAAGCGGCATCCCGCTaGCTAGGGCGCAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: LRGVSTAWQVLRRASYVKQAASR*LGRRSA
Trigger: GGCTGACCTGCGCCCTAGGCAGCGGGATGCCGCTTG...CTTTACATAGCTTGCCCTTCTAAGCACCTGCCACGCAGTGCTCACTCCTCGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638134.1
CDS-3UTR GCA 90 bp AGCTCCTCCACCAGGCCCTGGCGGACCCACGTCCGATTGTCAAACAGGGTGACCATCCCGGTTCCAGACTaGCAAGACCCGGAAGATGAA +
Preference number: 4 (lower is better)
Translates to: SSSTRPWRTHVRLSNRVTIPVPD*QDPEDE
Trigger: TTCATCTTCCGGGTCTTGGCAGTCTGGAACCGGGAT...GGTCACCCTGTTTGACAATCGGACGTGGGTCCGCCAGGGCCTGGTGGAGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR GCA 90 bp GGCCAGCATTCGGCCCTTGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGTATCCCGGTTCCAGACTaGCAAGACCCGGAAGATGAA +
Preference number: 4 (lower is better)
Translates to: GQHSALGPVQCQTQVPEGIPVPD*QDPEDE
Trigger: TTCATCTTCCGGGTCTTGGCAGTCTGGAACCGGGAT...ACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGAATGCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR GCA 90 bp GTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCCACCAGGCCCTATCCCGGTTCCAGACTaGCAAGACCCGGAAGATGAA +
Preference number: 4 (lower is better)
Translates to: VGSRPVRCWVVLAPPPGPIPVPD*QDPEDE
Trigger: TTCATCTTCCGGGTCTTGGCAGTCTGGAACCGGGAT...AGGGCCTGGTGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636658.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR GCA 90 bp CACAGCGTAGCCCCCAGGCACAATCCGGTAGGTGCTGCTGTCCGTATGAATTCCGGAACCAGGCAGCCATaGTTTCACCCACCAGACGCC +
Preference number: 4 (lower is better)
Translates to: HSVAPRHNPVGAAVRMNSGTRQP*FHPPDA
Trigger: GGCGTCTGGTGGGTGAAAGCATGGCTGCCTGGTTCC...GGAATTCATACGGACAGCAGCACCTACCGGATTGTGCCTGGGGGCTACGCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR GCA 90 bp GAAGCTGGCGAGGGGCGGCCGGACTTTCACACCCTGTGCTGTGACAGAGCCCTCGCACAATCCGGTAGGTaGTGCTGTCCGTATGAATTC +
Preference number: 4 (lower is better)
Translates to: EAGEGRPDFHTLCCDRALAQSGR*CCPYEF
Trigger: GAATTCATACGGACAGCAGCACCTACCGGATTGTGC...GAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGGCCGCCCCTCGCCAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp TGCCTTCCGAAGGCAGAAGGAATGAAAGATGCACATTCTGGGCTGACGGGCATGGTGTGTCACCGCTCCTaGCAGCGCAGCTGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: CLPKAEGMKDAHSGLTGMVCHRS*QRSCPD
Trigger: GTCGGGGCAGCTGCGCTGGCAGGAGCGGTGACACAC...CATGCCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTCTGCCTTCGGAAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp TGGGTAGTGGGTCAGATTCCAGGTAGGATGAACTGGGAGAAGCTGGCACCCCAGCGGCCCTTGGTCCTGTaGAGTGCCAAACGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: WVVGQIPGRMNWEKLAPQRPLVL*SAKRRS
Trigger: GGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCG...CTGGGGTGCCAGCTTCTCCCAGTTCATCCTACCTGGAATCTGACCCACTACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GTGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATGAAAGATGCCTGCCGACTCTaGGCTCCCTGTGGGACTCTC +
Preference number: 4 (lower is better)
Translates to: VQPPAVAASCLPKAEGMKDACRL*APCGTL
Trigger: GAGAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATC...TTTCATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGGCTGGACACGCTTCAGCTTaGGCTTCTCACAGGATTCCA +
Preference number: 4 (lower is better)
Translates to: HSGLTGMASTILGHPRGAGHASA*ASHRIP
Trigger: TGGAATCCTGTGAGAAGCGCAAGCTGAAGCGTGTCC...AGCCCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GGGCTGCAGACTCTGGGCGACAGCGTTGGCCAGGATGACGGCGATCATGACAGGGGACACGCTTCAGCTTaGGCTTCTCACAGGATTCCA +
Preference number: 4 (lower is better)
Translates to: GLQTLGDSVGQDDGDHDRGHASA*ASHRIP
Trigger: TGGAATCCTGTGAGAAGCGCAAGCTGAAGCGTGTCC...CCTGTCATGATCGCCGTCATCCTGGCCAACGCTGTCGCCCAGAGTCTGCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR GCA 90 bp GGGCTCAGCTGGGCCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCACAGGTTCATCTAGTTaGTGCTCCTCCCACTCCAGA +
Preference number: 4 (lower is better)
Translates to: GLSWAPNNATTCERSMEPTGSSS*CSSHSR
Trigger: TCTGGAGTGGGAGGAGCAGCAACTAGATGAACCTGT...GGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGCTGAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CTCCTCCACCAGGCCCTGGCGGACCCACGTCCGATTGTCAAACAGGGTGACCAGGACTTTCACACCCTGTaGTGTGACAGAGCCCTCGAT +
Preference number: 4 (lower is better)
Translates to: LLHQALADPRPIVKQGDQDFHTL*CDRALD
Trigger: ATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTC...CTGGTCACCCTGTTTGACAATCGGACGTGGGTCCGCCAGGGCCTGGTGGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CACAGAAGAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGACAGAAGGAATGAAAGATaGACATTCTGGGCTGACGGG +
Preference number: 4 (lower is better)
Translates to: HRRGSGGRCLPTLRSLWDRRNER*TFWADG
Trigger: CCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTCT...GTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp TGGGTAGTGGGTCAGATTCCAGGTAGGATGAACTGGGAGAAGCTGGCACCCCAGGCCTCCAGCTGTAGCTaGCTCCTGCCTTCCGAAGGC +
Preference number: 4 (lower is better)
Translates to: WVVGQIPGRMNWEKLAPQASSCS*LLPSEG
Trigger: GCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGC...CTGGGGTGCCAGCTTCTCCCAGTTCATCCTACCTGGAATCTGACCCACTACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGGCTCTCTGGAAGACTTGTTaGAGGTGGGTAGTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: HSGLTGMASTILGHPRGALWKTC*RWVVGQ
Trigger: CTGACCCACTACCCACCTGCAACAAGTCTTCCAGAG...AGCCCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp CCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATGAAAGATGCACCAGGAGGCGGAGGTTaGGGTGAGCCGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: PPAVAASCLPKAEGMKDAPGGGG*GEPRSH
Trigger: GTGCGATCTCGGCTCACCGCAACCTCCGCCTCCTGG...TGCATCTTTCATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636661.1
ENST00000637909.1
CDS-3UTR GCA 90 bp ACCATGATGTCCTCCACACGCACCCGGTACTGCTGGTGGCGGCCCCAGCCGAGCCAGACGCCCAAATGCTaGTCCTTCATGAGAATGAAG +
Preference number: 4 (lower is better)
Translates to: TMMSSTRTRYCWWRPQPSQTPKC*SFMRMK
Trigger: CTTCATTCTCATGAAGGAGCAGCATTTGGGCGTCTG...GCTCGGCTGGGGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637538.1
CDS-3UTR CCA 90 bp GAAGGAATGAAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGTTCCGGCTCTGTCCTaGACTCGGCTCCCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: EGMKDAHSGLTGMASTILVPALS*TRLPAR
Trigger: GCGGGCCGGGAGCCGAGTCCAGGACAGAGCCGGAAC...TAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
CDS-3UTR CCA 90 bp CCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATGAAAGATGCAGTACTGCAGCGCCCGTaGCTCCATCCCTTCCTCCGC +
Preference number: 4 (lower is better)
Translates to: PPAVAASCLPKAEGMKDAVLQRP*LHPFLR
Trigger: GCGGAGGAAGGGATGGAGCCACGGGCGCTGCAGTAC...TGCATCTTTCATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
CDS-3UTR CCA 90 bp ACATCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCTGGTGGCGGCCCGATACTAGGAACTTGTaGCAGCGGACAGAACAGACG +
Preference number: 4 (lower is better)
Translates to: TSRTMMSSTRTRYCWWRPDTRNL*QRTEQT
Trigger: CGTCTGTTCTGTCCGCTGCCACAAGTTCCTAGTATC...GGGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636241.1
ENST00000636661.1
ENST00000638134.1
CDS-3UTR CCA 90 bp CACGTGGTGGGTTCCAGGCCTGTGAGGTGCTGGGTGGTTCTAGCTCCTCCACCAACTGGAGCAAGATGCTaGTGTTCAAGCCCCGGGACA +
Preference number: 4 (lower is better)
Translates to: HVVGSRPVRCWVVLAPPPTGARC*CSSPGT
Trigger: TGTCCCGGGGCTTGAACACCAGCATCTTGCTCCAGT...TGGTGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACCACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp ATTCGGCCCTTGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGTGCAGCTGACTGGAGCAAGATGCTaGTGTTCAAGCCCCGGGACA +
Preference number: 4 (lower is better)
Translates to: IRPLVLCSAKRRSRKVQLTGARC*CSSPGT
Trigger: TGTCCCGGGGCTTGAACACCAGCATCTTGCTCCAGT...CAGCTGCACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636241.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp CTGGTGACACTGGGCCCCCTCTTGAGTGCAGGCTTTAGGGGCTTGTGGGTCTCCACTGGAGCAAGATGCTaGTGTTCAAGCCCCGGGACA +
Preference number: 4 (lower is better)
Translates to: LVTLGPLLSAGFRGLWVSTGARC*CSSPGT
Trigger: TGTCCCGGGGCTTGAACACCAGCATCTTGCTCCAGT...GGAGACCCACAAGCCCCTAAAGCCTGCACTCAAGAGGGGGCCCAGTGTCACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GCCACATGGGGAACATCCCGCACCATGATGTCCTCCACACGCACCCGGTACTGCACCCAGGCCAGGTACTaGAGCAAGATGCTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: ATWGTSRTMMSSTRTRYCTQARY*SKMLVF
Trigger: GAACACCAGCATCTTGCTCCAGTACCTGGCCTGGGT...GCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGATGTTCCCCATGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636241.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp CGGCCCTTGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGTGCAGCTGAGGAATGACAGCAAAGGCTaGCAGCTCCTGCAGGTCAAA +
Preference number: 4 (lower is better)
Translates to: RPLVLCSAKRRSRKVQLRNDSKG*QLLQVK
Trigger: TTTGACCTGCAGGAGCTGCCAGCCTTTGCTGTCATT...CCTCAGCTGCACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp AGGCACAATCCGGTAGGTGCTGCTGTCCGTATGAATTCCATCTGGGAACCAGGCTCCTCCACCAGGCCCTaGCGGACCCACGTCCGATTG +
Preference number: 4 (lower is better)
Translates to: RHNPVGAAVRMNSIWEPGSSTRP*RTHVRL
Trigger: CAATCGGACGTGGGTCCGCCAGGGCCTGGTGGAGGA...GCCTGGTTCCCAGATGGAATTCATACGGACAGCAGCACCTACCGGATTGTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000475279.2
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp CAGCGTGGAGATGAGCAGGGTCACCAGAGCCGGGAAGAGCAGGCGTCTAGAGTCGAACTGGGATGGTGGTaGCCAGTGCAGACATCCAGA +
Preference number: 4 (lower is better)
Translates to: QRGDEQGHQSREEQASRVELGWW*PVQTSR
Trigger: TCTGGATGTCTGCACTGGCCACCACCATCCCAGTTC...GACTCTAGACGCCTGCTCTTCCCGGCTCTGGTGACCCTGCTCATCTCCACGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475279.2
ENST00000636661.1
CDS-3UTR CCA 90 bp GATGCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGACACAGGGAACTGGGATaGTGGTGGCCAGTGCAGACA +
Preference number: 4 (lower is better)
Translates to: DAHSGLTGMASTILGHPRHRELG*WWPVQT
Trigger: TGTCTGCACTGGCCACCACCATCCCAGTTCCCTGTG...TCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GGAATGAAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCGGCCCCACAGGGAACTaGGATGGTGGTGGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: GMKDAHSGLTGMASTILGGPTGN*DGGGQC
Trigger: GCACTGGCCACCACCATCCCAGTTCCCTGTGGGGCC...GCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTTCATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp ATTCGGCCCTTGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGTGCAGCTGACACGATCACAGCCGTaGACACTGTGTGTGTCACCG +
Preference number: 4 (lower is better)
Translates to: IRPLVLCSAKRRSRKVQLTRSQP*TLCVSP
Trigger: CGGTGACACACACAGTGTCCACGGCTGTGATCGTGT...CAGCTGCACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430397.5
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp CTGGTGACACTGGGCCCCCTCTTGAGTGCAGGCTTTAGGGGCTTGTGGGTCTCCAGGATGTGGGCAATCTaGCCTGTGAGCTCGAACACG +
Preference number: 4 (lower is better)
Translates to: LVTLGPLLSAGFRGLWVSRMWAI*PVSSNT
Trigger: CGTGTTCGAGCTCACAGGCCAGATTGCCCACATCCT...GGAGACCCACAAGCCCCTAAAGCCTGCACTCAAGAGGGGGCCCAGTGTCACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR CCA 90 bp TGCAGACTCTGGGCGACAGCGTTGGCCAGGATGACGGCGATCATGACAGGCAGGATGACAGGCAGGATGTaGGCAATCTGGCCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: CRLWATALARMTAIMTGRMTGRM*AIWPVS
Trigger: GCTCACAGGCCAGATTGCCCACATCCTGCCTGTCAT...CCTGCCTGTCATGATCGCCGTCATCCTGGCCAACGCTGTCGCCCAGAGTCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636241.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp GCAGAAGGAATGAAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCACCATCACCCGGTACTGCTGGTaGCGGCCCCAGCCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: AEGMKDAHSGLTGMASTITRYCW*RPQPSS
Trigger: TGAGCTCGGCTGGGGCCGCCACCAGCAGTACCGGGT...GATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp TGCCTTCCGAAGGCAGAAGGAATGAAAGATGCACATTCTGGGCTGACGGGCATGACCCGGTACTGCTGGTaGCGGCCCCAGCCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: CLPKAEGMKDAHSGLTGMTRYCW*RPQPSS
Trigger: TGAGCTCGGCTGGGGCCGCCACCAGCAGTACCGGGT...CATGCCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTCTGCCTTCGGAAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp TGTGAGTCTCTTCAGGGCTCATCTCGCCTTCCAGGTCCGCGTCACTTGCCAGGGCCAGCATTCGGCCCTTaGTCCTGTGCAGTGCCAAAC +
Preference number: 4 (lower is better)
Translates to: CESLQGSSRLPGPRHLPGPAFGP*SCAVPN
Trigger: GTTTGGCACTGCACAGGACCAAGGGCCGAATGCTGG...CCCTGGCAAGTGACGCGGACCTGGAAGGCGAGATGAGCCCTGAAGAGACTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430397.5
CDS-3UTR CCA 90 bp GCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACCCACGAGGGAGCCCAGCAGAATCATaGACTCAGGGGACTCCACTA +
Preference number: 4 (lower is better)
Translates to: AHSGLTGMASTILGHPRGSPAES*TQGTPL
Trigger: TAGTGGAGTCCCCTGAGTCCATGATTCTGCTGGGCT...CCCTCGTGGGTGGCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000637909.1
CDS-3UTR CCA 90 bp CCCGACCACAGCGTAGCCCCCAGGCACAATCCGGTAGGTGCTGCTGTCCGTATGAGCCCAGCAGAATCATaGACTCAGGGGACTCCACTA +
Preference number: 4 (lower is better)
Translates to: PDHSVAPRHNPVGAAVRMSPAES*TQGTPL
Trigger: TAGTGGAGTCCCCTGAGTCCATGATTCTGCTGGGCT...CATACGGACAGCAGCACCTACCGGATTGTGCCTGGGGGCTACGCTGTGGTCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000637909.1
ENST00000638134.1
CDS-3UTR CCA 90 bp GGAATGAAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCACCATCCTAGGCCACTGTCTCGGAAGCTaGCGAGGGGCGGCCGGACTT +
Preference number: 4 (lower is better)
Translates to: GMKDAHSGLTGMASTILGHCLGS*RGAAGL
Trigger: AAGTCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTG...GCCTAGGATGGTGCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTTCATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp CCGAAGGCAGAAGGAATGAAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCCACTGTCTCGGAAGCTaGCGAGGGGCGGCCGGACTT +
Preference number: 4 (lower is better)
Translates to: PKAEGMKDAHSGLTGMASHCLGS*RGAAGL
Trigger: AAGTCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTG...GCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTCTGCCTTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp TGGGGTGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATTGTCACTGCTGCTGGTaGCACTGTCTCGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: WGAASSCSCLLPSEGRRNCHCCW*HCLGSW
Trigger: CCAGCTTCCGAGACAGTGCCACCAGCAGCAGTGACA...ATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp TGGGGTGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATGTGCATGCACCTCAGTaGTCTCCGTGTCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: WGAASSCSCLLPSEGRRNVHAPQ*SPCHCC
Trigger: GCAGCAGTGACACGGAGACCACTGAGGTGCATGCAC...ATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp TGGGGTGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATCCACGAGGGGCTCATTaGCATTTGTCGTCGCTGTCG +
Preference number: 4 (lower is better)
Translates to: WGAASSCSCLLPSEGRRNPRGAH*HLSSLS
Trigger: CGACAGCGACGACAAATGCCAATGAGCCCCTCGTGG...ATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp TGGGGTGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGAATCCAGGTAGGATGAACTaGGAGAAGCTGGCACCCCAG +
Preference number: 4 (lower is better)
Translates to: WGAASSCSCLLPSEGRRNPGRMN*EKLAPQ
Trigger: CTGGGGTGCCAGCTTCTCCCAGTTCATCCTACCTGG...ATTCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp CAGAAGAGGCTCCGGAGGGCGATGCCTGCCGACTCTGCGCTCCCTGTGGGACTCAAGACTTGTTGCAGGTaGGTAGTGGGTCAGATTCCA +
Preference number: 4 (lower is better)
Translates to: QKRLRRAMPADSALPVGLKTCCR*VVGQIP
Trigger: TGGAATCTGACCCACTACCCACCTGCAACAAGTCTT...GAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GGCCATGACGGGAGTGGGGCCCCCAGAGTGCATGCACCTCAGTGGTCTCCGTGTCTATCTTCCTGCCTCTaGAAGACTTGTTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GHDGSGAPRVHAPQWSPCLSSCL*KTCCRW
Trigger: CCACCTGCAACAAGTCTTCCAGAGGCAGGAAGATAG...ACACGGAGACCACTGAGGTGCATGCACTCTGGGGGCCCCACTCCCGTCATGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp GGGCTCAGCTGGGCCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCCTATCTTCCTGCCTCTaGAAGACTTGTTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GLSWAPNNATTCERSMEPLSSCL*KTCCRW
Trigger: CCACCTGCAACAAGTCTTCCAGAGGCAGGAAGATAG...GGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGCTGAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR CCA 90 bp CCCCCAACAATGCCACCACCTGTGAACGCTCGATGGAGCCCAGCAGAATCATGGCTCTCACACTCAGAGTaGGGGGCCTTGCATGCAGGC +
Preference number: 4 (lower is better)
Translates to: PPTMPPPVNARWSPAESWLSHSE*GALHAG
Trigger: GCCTGCATGCAAGGCCCCCCACTCTGAGTGTGAGAG...CCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000636241.1
CDS-3UTR CCA 90 bp CGGCCCTTGGTCCTGTGCAGTGCCAAACGCAGGTCCCGGAAGGTGCAGCTGAGGAGGCTGATGGTGGACTaGGGTTATTCTAAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: RPLVLCSAKRRSRKVQLRRLMVD*GYSKSR
Trigger: CCTGCTCTTAGAATAACCCCAGTCCACCATCAGCCT...CCTCAGCTGCACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636661.1
CDS-3UTR CCA 90 bp ACGGGAGTGGGGCCCCCAGAGTGCATGCACCTCAGTGGTCTCCGTGTCACTGCTGACTCTGGCAAGTGCTaGTCCATTCCCTTTGGAACC +
Preference number: 4 (lower is better)
Translates to: TGVGPPECMHLSGLRVTADSGKC*SIPFGT
Trigger: GGTTCCAAAGGGAATGGACCAGCACTTGCCAGAGTC...AGCAGTGACACGGAGACCACTGAGGTGCATGCACTCTGGGGGCCCCACTCCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636661.1
CDS-3UTR TCA 90 bp GCTGGGGTGCAGCCTCCAGCTGTAGCTGCCTCCTGCCTTCCGAAGGCAGAAGGACTGTGTGAATCCGGCTaGGAAAGTGATGAGGACAAC +
Preference number: 4 (lower is better)
Translates to: AGVQPPAVAASCLPKAEGLCESG*ESDEDN
Trigger: GTTGTCCTCATCACTTTCTCAGCCGGATTCACACAG...TCCTTCTGCCTTCGGAAGGCAGGAGGCAGCTACAGCTGGAGGCTGCACCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000434054.6
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp CCCGACCACAGCGTAGCCCCCAGGCACAATCCGGTAGGTGCTGCTGTCCGTATGCTGTGTGAATCCGGCTaGGAAAGTGATGAGGACAAC +
Preference number: 4 (lower is better)
Translates to: PDHSVAPRHNPVGAAVRMLCESG*ESDEDN
Trigger: GTTGTCCTCATCACTTTCTCAGCCGGATTCACACAG...CATACGGACAGCAGCACCTACCGGATTGTGCCTGGGGGCTACGCTGTGGTCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR TCA 90 bp TGCCTTCCGAAGGCAGAAGGAATGAAAGATGCACATTCTGGGCTGACGGGCATGCCAGAGCCGACAGCCTaGGGGGCCAGGATCTGTGTG +
Preference number: 4 (lower is better)
Translates to: CLPKAEGMKDAHSGLTGMPEPTA*GARICV
Trigger: CACACAGATCCTGGCCCCTCAGGCTGTCGGCTCTGG...CATGCCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTCTGCCTTCGGAAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp CCGAAGGCAGAAGGAATGAAAGATGCACATTCTGGGCTGACGGGCATGGCTAGCAGGTCAGCGTGGAGATaGGCAGGGTCACCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: PKAEGMKDAHSGLTGMASRSAWR*AGSPEP
Trigger: CGGCTCTGGTGACCCTGCTCATCTCCACGCTGACCT...GCTAGCCATGCCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTCTGCCTTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp CCTTCCGAAGGCAGAAGGAATGAAAGATGCACATTCTGGGCTGACGGGCATGGCAGGTCAGCGTGGAGATaGGCAGGGTCACCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: PSEGRRNERCTFWADGHGRSAWR*AGSPEP
Trigger: CGGCTCTGGTGACCCTGCTCATCTCCACGCTGACCT...GCCATGCCCGTCAGCCCAGAATGTGCATCTTTCATTCCTTCTGCCTTCGGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265593.9
ENST00000344937.11
ENST00000430397.5
ENST00000434054.6
ENST00000457512.1
ENST00000636180.1
ENST00000636661.1
ENST00000637909.1
CDS-3UTR TCA 90 bp CTGGTGACACTGGGCCCCCTCTTGAGTGCAGGCTTTAGGGGCTTGTGGGTCTCCGTGCTGCTGTCCGTATaGATTCCATCTGGGAACCAG +
Preference number: 4 (lower is better)
Translates to: LVTLGPLLSAGFRGLWVSVLLSV*IPSGNQ
Trigger: CTGGTTCCCAGATGGAATTCATACGGACAGCAGCAC...GGAGACCCACAAGCCCCTAAAGCCTGCACTCAAGAGGGGGCCCAGTGTCACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000430397.5
ENST00000636180.1
ENST00000636661.1
ENST00000637538.1
ENST00000637909.1
CDS-3UTR TCA 90 bp TCTGGGAACCAGGCAGCCATGCTTTCACCCACCAGACGCCCAAATGCTGCTCCAGGGCAATCTGGCCTGTaGGCTCGAACACGATCACAG +
Preference number: 4 (lower is better)
Translates to: SGNQAAMLSPTRRPNAAPGQSGL*ARTRSQ
Trigger: CTGTGATCGTGTTCGAGCTCACAGGCCAGATTGCCC...TGGAGCAGCATTTGGGCGTCTGGTGGGTGAAAGCATGGCTGCCTGGTTCCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636661.1
ENST00000637909.1
ENST00000638134.1
CDS-3UTR TCA 90 bp AGGTGGGTAGTGGGTCAGATTCCAGGTAGGATGAACTGGGAGAAGCTGGCACCCGAACATCCCGCACCATaGTGTCCTCCACACGCACCC +
Preference number: 4 (lower is better)
Translates to: RWVVGQIPGRMNWEKLAPEHP