Pregenerated sensors for CLCA4 (Homo sapiens)
Ensembl gene IDs: ENSG00000016602Ensembl transcript IDs: ENST00000370563.3, ENST00000496322.1
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TTGACTTGGTGGGTATTGGTCAGGCAAGGGAAGGCTTGGGACTTGTaGTACCACAAATGCACCTCCGGATGCTGTTCGGCTGAAATCCTC | + |
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Preference number: 5 (lower is better) Translates to: LTWWVLVRQGKAWDL*YHKCTSGCCSAEIL Trigger: GAGGATTTCAGCCGAACAGCATCCGGAGGTGCATTTGTGGTATCACAAGTCCCAAGCCTTCCCTTGCCTGACCAATACCCACCAAGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370563.3 |
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| CDS TCA 90 bp | TTGGGACTTGTGATACCACAAATGCACCTCCGGATGCTGTTCGGCTaGAATCCTCCAAGGTGGTCTGAGTATCCTCATCAATTTCAGGTC | + |
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Preference number: 5 (lower is better) Translates to: LGLVIPQMHLRMLFG*NPPRWSEYPHQFQV Trigger: GACCTGAAATTGATGAGGATACTCAGACCACCTTGGAGGATTTCAGCCGAACAGCATCCGGAGGTGCATTTGTGGTATCACAAGTCCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370563.3 |
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| CDS CCA 90 bp | CTGGTATGTACGCGGCTCTATTCAGTGGAGGCCGTAATTTTAGCCTaGCAGTGTTTGCTCCTCCATGAGCCCGAACTTTTAAGCTATATC | + |
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Preference number: 5 (lower is better) Translates to: LVCTRLYSVEAVILA*QCLLLHEPELLSYI Trigger: GATATAGCTTAAAAGTTCGGGCTCATGGAGGAGCAAACACTGCCAGGCTAAAATTACGGCCTCCACTGAATAGAGCCGCGTACATACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370563.3 |
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| CDS TCA 90 bp | CGAGAAGTTACTGTAATAGTTAATGTTTCTGGGTTCGCTTTGGCTTaGAGATTGTATGCCCAAGTGCCCACCTTTGCAGTTCCTGGAATA | + |
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Preference number: 5 (lower is better) Translates to: REVTVIVNVSGFALA*RLYAQVPTFAVPGI Trigger: TATTCCAGGAACTGCAAAGGTGGGCACTTGGGCATACAATCTTCAAGCCAAAGCGAACCCAGAAACATTAACTATTACAGTAACTTCTCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370563.3 |
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| CDS CCA 90 bp | GGGGAAACTGTTTACGTCCTTATTCATTTTAGCATTCACTGTGATTaGAGGCACAGAAGAATTTGCTGCTCGAGAAGTTACTGTAATAGT | + |
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Preference number: 5 (lower is better) Translates to: GETVYVLIHFSIHCD*RHRRICCSRSYCNS Trigger: ACTATTACAGTAACTTCTCGAGCAGCAAATTCTTCTGTGCCTCCAATCACAGTGAATGCTAAAATGAATAAGGACGTAAACAGTTTCCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370563.3 |
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| CDS TCA 90 bp | TGCACCATTATCCAAAAGTTCCAAAACTTCTGTATGTCCATTCTGTaGTTCAATGAAAGCAGTCACATTGGCTCCAAGAACAGGTACATA | + |
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Preference number: 5 (lower is better) Translates to: CTIIQKFQNFCMSIL*FNESSHIGSKNRYI Trigger: TATGTACCTGTTCTTGGAGCCAATGTGACTGCTTTCATTGAATCACAGAATGGACATACAGAAGTTTTGGAACTTTTGGATAATGGTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370563.3 |
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| CDS TCA 90 bp | ATCTCTATTACTGCTTCATCAGCAGCTCTTCCCAAAGCAATAAAATaGACAATGGCCCCACTTTGTTTCACTTCATCAATACAAGAACTT | + |
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Preference number: 5 (lower is better) Translates to: ISITASSAALPKAIK*TMAPLCFTSSIQEL Trigger: AAGTTCTTGTATTGATGAAGTGAAACAAAGTGGGGCCATTGTTCATTTTATTGCTTTGGGAAGAGCTGCTGATGAAGCAGTAATAGAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370563.3 ENST00000496322.1 |
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| CDS TCA 72 bp | TGGGTATTGGTCAGGCAAGGGAAGGCTTGGGACTTGTaGTACCACAAATGCACCTCCGGATGCTGTTCGGCT | + |
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Preference number: 6 (lower is better) Translates to: WVLVRQGKAWDL*YHKCTSGCCSA Trigger: AGCCGAACAGCATCCGGAGGTGCATTTGTGGTATCACAAGTCCCAAGCCTTCCCTTGCCTGACCAATACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370563.3 |
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| CDS CCA 72 bp | ACGCGGCTCTATTCAGTGGAGGCCGTAATTTTAGCCTaGCAGTGTTTGCTCCTCCATGAGCCCGAACTTTTA | + |
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Preference number: 6 (lower is better) Translates to: TRLYSVEAVILA*QCLLLHEPELL Trigger: TAAAAGTTCGGGCTCATGGAGGAGCAAACACTGCCAGGCTAAAATTACGGCCTCCACTGAATAGAGCCGCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370563.3 |
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| CDS CCA 72 bp | CTCATGAACTGTGGCATCAAGGTCTGTGATTTGACTTaGTGGGTATTGGTCAGGCAAGGGAAGGCTTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: LMNCGIKVCDLT*WVLVRQGKAWD Trigger: GTCCCAAGCCTTCCCTTGCCTGACCAATACCCACCAAGTCAAATCACAGACCTTGATGCCACAGTTCATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370563.3 |
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| CDS TCA 72 bp | GTGATACCACAAATGCACCTCCGGATGCTGTTCGGCTaGAATCCTCCAAGGTGGTCTGAGTATCCTCATCAA | + |
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Preference number: 6 (lower is better) Translates to: VIPQMHLRMLFG*NPPRWSEYPHQ Trigger: TTGATGAGGATACTCAGACCACCTTGGAGGATTTCAGCCGAACAGCATCCGGAGGTGCATTTGTGGTATCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370563.3 |
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| CDS CAA 72 bp | CCAAGGTGGTCTGAGTATCCTCATCAATTTCAGGTCTaGGCGGGTTTGCTTCAATTTCCCCGTTCACTACCC | + |
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Preference number: 6 (lower is better) Translates to: PRWSEYPHQFQV*AGLLQFPRSLP Trigger: GGGTAGTGAACGGGGAAATTGAAGCAAACCCGCCAAGACCTGAAATTGATGAGGATACTCAGACCACCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370563.3 |
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| CDS CCA 72 bp | CAAGGTGGTCTGAGTATCCTCATCAATTTCAGGTCTTaGCGGGTTTGCTTCAATTTCCCCGTTCACTACCCA | + |
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Preference number: 6 (lower is better) Translates to: QGGLSILINFRS*RVCFNFPVHYP Trigger: TGGGTAGTGAACGGGGAAATTGAAGCAAACCCGCCAAGACCTGAAATTGATGAGGATACTCAGACCACCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370563.3 |
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| CDS CAA 72 bp | CTTATCCTCATGAACTGTGGCATCAAGGTCTGTGATTaGACTTGGTGGGTATTGGTCAGGCAAGGGAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: LILMNCGIKVCD*TWWVLVRQGKA Trigger: AGCCTTCCCTTGCCTGACCAATACCCACCAAGTCAAATCACAGACCTTGATGCCACAGTTCATGAGGATAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370563.3 |
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| CDS CAA 90 bp | ACGCGGCTCTATTCAGTGGAGGCCGTAATTTTAGCCTGGCAGTGTTaGCTCCTCCATGAGCCCGAACTTTTAAGCTATATCTGCCATTTT | + |
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Preference number: 6 (lower is better) Translates to: TRLYSVEAVILAWQC*LLHEPELLSYICHF Trigger: AAAATGGCAGATATAGCTTAAAAGTTCGGGCTCATGGAGGAGCAAACACTGCCAGGCTAAAATTACGGCCTCCACTGAATAGAGCCGCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370563.3 |
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| CDS CAA 90 bp | AAGAATAATCTTATCCTCATGAACTGTGGCATCAAGGTCTGTGATTaGACTTGGTGGGTATTGGTCAGGCAAGGGAAGGCTTGGGACTTG | + |
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Preference number: 6 (lower is better) Translates to: KNNLILMNCGIKVCD*TWWVLVRQGKAWDL Trigger: CAAGTCCCAAGCCTTCCCTTGCCTGACCAATACCCACCAAGTCAAATCACAGACCTTGATGCCACAGTTCATGAGGATAAGATTATTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370563.3 |
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| CDS CCA 72 bp | TTCTGTGAACTGCTTGGTGTATGGTTCATCTCTACCTaGGAGTGTAGGTGGTGCAACTATAACATCAGCATG | + |
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Preference number: 6 (lower is better) Translates to: FCELLGVWFIST*ECRWCNYNISM Trigger: CATGCTGATGTTATAGTTGCACCACCTACACTCCCAGGTAGAGATGAACCATACACCAAGCAGTTCACAGAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370563.3 |
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| CDS CAA 72 bp | TATTCAGTGGAGGCCGTAATTTTAGCCTGGCAGTGTTaGCTCCTCCATGAGCCCGAACTTTTAAGCTATATC | + |
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Preference number: 6 (lower is better) Translates to: YSVEAVILAWQC*LLHEPELLSYI Trigger: GATATAGCTTAAAAGTTCGGGCTCATGGAGGAGCAAACACTGCCAGGCTAAAATTACGGCCTCCACTGAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370563.3 |
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| CDS TCA 72 bp | ACTGTAATAGTTAATGTTTCTGGGTTCGCTTTGGCTTaGAGATTGTATGCCCAAGTGCCCACCTTTGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: TVIVNVSGFALA*RLYAQVPTFAV Trigger: AACTGCAAAGGTGGGCACTTGGGCATACAATCTTCAAGCCAAAGCGAACCCAGAAACATTAACTATTACAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370563.3 |
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| CDS CCA 72 bp | CTTGGTGTATGGTTCATCTCTACCTGGGAGTGTAGGTaGTGCAACTATAACATCAGCATGTTTATGGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: LGVWFISTWECR*CNYNISMFMVF Trigger: GAAAACCATAAACATGCTGATGTTATAGTTGCACCACCTACACTCCCAGGTAGAGATGAACCATACACCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370563.3 |
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| CDS CAA 90 bp | ATCAGCAGCTCTTCCCAAAGCAATAAAATGAACAATGGCCCCACTTaGTTTCACTTCATCAATACAAGAACTTGCAGTGTTATCCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: ISSSSQSNKMNNGPT*FHFINTRTCSVILP Trigger: GGGGAGGATAACACTGCAAGTTCTTGTATTGATGAAGTGAAACAAAGTGGGGCCATTGTTCATTTTATTGCTTTGGGAAGAGCTGCTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370563.3 ENST00000496322.1 |
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| CDS TCA 72 bp | AAATGCAAAGCTTTCCTTGGAGTTGGCCTCCTTTGGTaGCAGATCAGTAGTATTTACTTGAAGAGCATCATC | + |
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Preference number: 6 (lower is better) Translates to: KCKAFLGVGLLW*QISSIYLKSII Trigger: GATGATGCTCTTCAAGTAAATACTACTGATCTGTCACCAAAGGAGGCCAACTCCAAGGAAAGCTTTGCATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370563.3 |
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| CDS TCA 72 bp | ATTAGCTTATTTACAATAGTGGCAGTACTATCAAAGTaGACCATCCCCACCCAGGATCCATTTTCAACAGTC | + |
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Preference number: 6 (lower is better) Translates to: ISLFTIVAVLSK*TIPTQDPFSTV Trigger: GACTGTTGAAAATGGATCCTGGGTGGGGATGGTTCACTTTGATAGTACTGCCACTATTGTAAATAAGCTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370563.3 |
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| CDS TCA 72 bp | ACTGCTTCATCAGCAGCTCTTCCCAAAGCAATAAAATaGACAATGGCCCCACTTTGTTTCACTTCATCAATA | + |
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Preference number: 6 (lower is better) Translates to: TASSAALPKAIK*TMAPLCFTSSI Trigger: TATTGATGAAGTGAAACAAAGTGGGGCCATTGTTCATTTTATTGCTTTGGGAAGAGCTGCTGATGAAGCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370563.3 ENST00000496322.1 |
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| CDS GCA 72 bp | AGTTCCTGGAATACTGAGATAGGCCATTTTGGAAGTTaGATCCACTGTGAAATTTTCCATTATTGTTCCACT | + |
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Preference number: 6 (lower is better) Translates to: SSWNTEIGHFGS*IHCEIFHYCST Trigger: AGTGGAACAATAATGGAAAATTTCACAGTGGATGCAACTTCCAAAATGGCCTATCTCAGTATTCCAGGAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370563.3 |
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| CDS GCA 72 bp | AGTAGGAGTAGGTGTAGGATCAATGTCATCAGGATTTaGTTGAGGGATAAACAAAGTTACTTGTGCAATGTT | + |
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Preference number: 6 (lower is better) Translates to: SRSRCRINVIRI*LRDKQSYLCNV Trigger: AACATTGCACAAGTAACTTTGTTTATCCCTCAAGCAAATCCTGATGACATTGATCCTACACCTACTCCTACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370563.3 |
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| CDS CAA 72 bp | GTATGTCCATTCTGTGATTCAATGAAAGCAGTCACATaGGCTCCAAGAACAGGTACATATCCTTGTAGAATT | + |
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Preference number: 6 (lower is better) Translates to: VCPFCDSMKAVT*APRTGTYPCRI Trigger: AATTCTACAAGGATATGTACCTGTTCTTGGAGCCAATGTGACTGCTTTCATTGAATCACAGAATGGACATAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370563.3 |
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| CDS CAA 72 bp | TCTTCCCAAAGCAATAAAATGAACAATGGCCCCACTTaGTTTCACTTCATCAATACAAGAACTTGCAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: SSQSNKMNNGPT*FHFINTRTCSV Trigger: AACACTGCAAGTTCTTGTATTGATGAAGTGAAACAAAGTGGGGCCATTGTTCATTTTATTGCTTTGGGAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370563.3 ENST00000496322.1 |
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