Pregenerated sensors for CLCA1 (Homo sapiens)
Ensembl gene IDs: ENSG00000016490Ensembl transcript IDs: ENST00000234701.7, ENST00000394711.2
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ACTGCCCCCGTGAATTTCCGCCTTCAGGTCGGTGATTTGGCCAGGTaGGAAGAGATCAGGTATGGGAGCATTTGGGACATCAGAAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: TAPVNFRLQVGDLAR*EEIRYGSIWDIRSH Trigger: GTGGCTTCTGATGTCCCAAATGCTCCCATACCTGATCTCTTCCCACCTGGCCAAATCACCGACCTGAAGGCGGAAATTCACGGGGGCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS TCA 90 bp | TCATCCCCAGGAGCTGTCCAAGTCAGATTAATGAGACTGCCCCCGTaGATTTCCGCCTTCAGGTCGGTGATTTGGCCAGGTGGGAAGAGA | + |
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Preference number: 5 (lower is better) Translates to: SSPGAVQVRLMRLPP*ISAFRSVIWPGGKR Trigger: TCTCTTCCCACCTGGCCAAATCACCGACCTGAAGGCGGAAATTCACGGGGGCAGTCTCATTAATCTGACTTGGACAGCTCCTGGGGATGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS CCA 90 bp | TCATCATTCTCAATCCAGCCAGGTATGTACAGTGCTCCACTCTGCTaGGGTATCACTCTCCGTCTGGCTGCGTTAACTCCTCCCAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: SSFSIQPGMYSAPLC*GITLRLAALTPPRA Trigger: GGCTCTGGGAGGAGTTAACGCAGCCAGACGGAGAGTGATACCCCAGCAGAGTGGAGCACTGTACATACCTGGCTGGATTGAGAATGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS GCA 90 bp | TATGTACAGTGCTCCACTCTGCTGGGGTATCACTCTCCGTCTGGCTaGGTTAACTCCTCCCAGAGCCCGCACTTTTACACTGTATCTACC | + |
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Preference number: 5 (lower is better) Translates to: YVQCSTLLGYHSPSG*VNSSQSPHFYTVST Trigger: GGTAGATACAGTGTAAAAGTGCGGGCTCTGGGAGGAGTTAACGCAGCCAGACGGAGAGTGATACCCCAGCAGAGTGGAGCACTGTACATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS CCA 90 bp | GGGGAATTTGCTGGTGTCCTTGTTCGTTTTGGAAGTCACTGTAATTaGAGGCAGGGTAGCATTGGACGCACGGGACGTGACAGTCAGGGT | + |
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Preference number: 5 (lower is better) Translates to: GEFAGVLVRFGSHCN*RQGSIGRTGRDSQG Trigger: ACCCTGACTGTCACGTCCCGTGCGTCCAATGCTACCCTGCCTCCAATTACAGTGACTTCCAAAACGAACAAGGACACCAGCAAATTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS GCA 90 bp | GACGCACGGGACGTGACAGTCAGGGTCAAGGTTTGTGAGCTTGCTTaGAGACTGTATTTCCAAGTGCCAACCTTAGCAATGCCTGGGATT | + |
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Preference number: 5 (lower is better) Translates to: DARDVTVRVKVCELA*RLYFQVPTLAMPGI Trigger: AATCCCAGGCATTGCTAAGGTTGGCACTTGGAAATACAGTCTGCAAGCAAGCTCACAAACCTTGACCCTGACTGTCACGTCCCGTGCGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS TCA 90 bp | TATGTCTGTAAACCTCCTGTCATTTTGGACAGCTCCTCTAGTTCTTaGGCTGCAGAGGGCCCCAAAGCGACTGTGTGGATGATGGCACCA | + |
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Preference number: 5 (lower is better) Translates to: YVCKPPVILDSSSSS*AAEGPKATVWMMAP Trigger: TGGTGCCATCATCCACACAGTCGCTTTGGGGCCCTCTGCAGCTCAAGAACTAGAGGAGCTGTCCAAAATGACAGGAGGTTTACAGACATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS TCA 90 bp | GGTAGCATTGGACGCACGGGACGTGACAGTCAGGGTCAAGGTTTGTaGGCTTGCTTGCAGACTGTATTTCCAAGTGCCAACCTTAGCAAT | + |
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Preference number: 5 (lower is better) Translates to: GSIGRTGRDSQGQGL*ACLQTVFPSANLSN Trigger: ATTGCTAAGGTTGGCACTTGGAAATACAGTCTGCAAGCAAGCTCACAAACCTTGACCCTGACTGTCACGTCCCGTGCGTCCAATGCTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS GCA 90 bp | TGTGACACTGGCCCTGAGAATTGGGGAGGCTCCTTGGCGAATATTTaGATAAACTACCAGAGGGCTGGGGAATTTGCTGGTGTCCTTGTT | + |
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Preference number: 5 (lower is better) Translates to: CDTGPENWGGSLANI*INYQRAGEFAGVLV Trigger: AACAAGGACACCAGCAAATTCCCCAGCCCTCTGGTAGTTTATGCAAATATTCGCCAAGGAGCCTCCCCAATTCTCAGGGCCAGTGTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS GCA 90 bp | ATTTCATCATTCTCAATCCAGCCAGGTATGTACAGTGCTCCACTCTaGTGGGGTATCACTCTCCGTCTGGCTGCGTTAACTCCTCCCAGA | + |
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Preference number: 5 (lower is better) Translates to: ISSFSIQPGMYSAPL*WGITLRLAALTPPR Trigger: TCTGGGAGGAGTTAACGCAGCCAGACGGAGAGTGATACCCCAGCAGAGTGGAGCACTGTACATACCTGGCTGGATTGAGAATGATGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS TCA 90 bp | GAAGAGATCAGGTATGGGAGCATTTGGGACATCAGAAGCCACAAATaGGCCTCCCGAGGATGTTCTGCTGAAACACACTTGCTTGTGTTG | + |
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Preference number: 5 (lower is better) Translates to: EEIRYGSIWDIRSHK*ASRGCSAETHLLVL Trigger: CAACACAAGCAAGTGTGTTTCAGCAGAACATCCTCGGGAGGCTCATTTGTGGCTTCTGATGTCCCAAATGCTCCCATACCTGATCTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS GCA 90 bp | ATTCCATTGTATTTCATCATTCTCAATCCAGCCAGGTATGTACAGTaGTCCACTCTGCTGGGGTATCACTCTCCGTCTGGCTGCGTTAAC | + |
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Preference number: 5 (lower is better) Translates to: IPLYFIILNPARYVQ*STLLGYHSPSGCVN Trigger: GTTAACGCAGCCAGACGGAGAGTGATACCCCAGCAGAGTGGAGCACTGTACATACCTGGCTGGATTGAGAATGATGAAATACAATGGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS CCA 90 bp | CTCTCCACAGTTGCCCATCTGCTCAGTGTAGGGTTCATCATTACCTaGAGGAGTAGACTCAGCAACCAGAACATCAGCATTTTTGTAGGT | + |
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Preference number: 5 (lower is better) Translates to: LSTVAHLLSVGFIIT*RSRLSNQNISIFVG Trigger: ACCTACAAAAATGCTGATGTTCTGGTTGCTGAGTCTACTCCTCCAGGTAATGATGAACCCTACACTGAGCAGATGGGCAACTGTGGAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS TCA 90 bp | CGATTGCAACGACAATGCCTTCATAGCCATTGTTGTTCAGCTGAATaGGTGAATTACTCAGGGCCCCTTCTAGAAGGTGAAGAATCAAGA | + |
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Preference number: 5 (lower is better) Translates to: RLQRQCLHSHCCSAE*VNYSGPLLEGEESR Trigger: TCTTGATTCTTCACCTTCTAGAAGGGGCCCTGAGTAATTCACTCATTCAGCTGAACAACAATGGCTATGAAGGCATTGTCGTTGCAATCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS TCA 90 bp | AATGAGCCTCCCGAGGATGTTCTGCTGAAACACACTTGCTTGTGTTaGACATCATCCTTATTAATTTCAGGTCTTGGTGGATTCCATTGT | + |
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Preference number: 5 (lower is better) Translates to: NEPPEDVLLKHTCLC*TSSLLISGLGGFHC Trigger: ACAATGGAATCCACCAAGACCTGAAATTAATAAGGATGATGTTCAACACAAGCAAGTGTGTTTCAGCAGAACATCCTCGGGAGGCTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS GCA 90 bp | AAGGTGAAGAATCAAGATGAACACAGAACTCTTAAATGGCCCCATTaGTGTACATCTCCCTGTGATTTCTCTCTTTGGAAAATGCGGGTT | + |
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Preference number: 5 (lower is better) Translates to: KVKNQDEHRTLKWPH*CTSPCDFSLWKMRV Trigger: AACCCGCATTTTCCAAAGAGAGAAATCACAGGGAGATGTACAGCAATGGGGCCATTTAAGAGTTCTGTGTTCATCTTGATTCTTCACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS TCA 90 bp | GGAGAACAAACTCACATCCTTTTTCATAGAGTCCTGTTACTTTATTaGATGTGCATCTTTTGGTGTAACAGCTGCCTCCCTGACACTTCT | + |
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Preference number: 5 (lower is better) Translates to: GEQTHILFHRVLLLY*MCIFWCNSCLPDTS Trigger: AGAAGTGTCAGGGAGGCAGCTGTTACACCAAAAGATGCACATTCAATAAAGTAACAGGACTCTATGAAAAAGGATGTGAGTTTGTTCTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS CCA 90 bp | CTTAAATGGCCCCATTGCTGTACATCTCCCTGTGATTTCTCTCTTTaGAAAATGCGGGTTACGAAGGTGTCTTTCTTTACCATTATATAT | + |
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Preference number: 5 (lower is better) Translates to: LKWPHCCTSPCDFSL*KMRVTKVSFFTIIY Trigger: ATATATAATGGTAAAGAAAGACACCTTCGTAACCCGCATTTTCCAAAGAGAGAAATCACAGGGAGATGTACAGCAATGGGGCCATTTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000234701.7 |
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| CDS GCA 90 bp | AACAATATCTTAGTCTCAAATTGCGTACTTGTAAATATTTCCATCTaGCTTCAGCTGTGCCAGATGCTTGACATAACCTCAACACCTCTT | + |
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Preference number: 5 (lower is better) Translates to: NNILVSNCVLVNISI*LQLCQMLDITSTPL Trigger: AAGAGGTGTTGAGGTTATGTCAAGCATCTGGCACAGCTGAAGGCAGATGGAAATATTTACAAGTACGCAATTTGAGACTAAGATATTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234701.7 |
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| CDS CCA 90 bp | ACACACTTGCTTGTGTTGAACATCATCCTTATTAATTTCAGGTCTTaGTGGATTCCATTGTATTTCATCATTCTCAATCCAGCCAGGTAT | + |
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Preference number: 5 (lower is better) Translates to: THLLVLNIILINFRS*WIPLYFIILNPARY Trigger: ATACCTGGCTGGATTGAGAATGATGAAATACAATGGAATCCACCAAGACCTGAAATTAATAAGGATGATGTTCAACACAAGCAAGTGTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS GCA 72 bp | TGCTCCACTCTGCTGGGGTATCACTCTCCGTCTGGCTaGGTTAACTCCTCCCAGAGCCCGCACTTTTACACT | + |
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Preference number: 6 (lower is better) Translates to: CSTLLGYHSPSG*VNSSQSPHFYT Trigger: AGTGTAAAAGTGCGGGCTCTGGGAGGAGTTAACGCAGCCAGACGGAGAGTGATACCCCAGCAGAGTGGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS CAA 72 bp | GGCTGTGACACTGGCCCTGAGAATTGGGGAGGCTCCTaGGCGAATATTTGCATAAACTACCAGAGGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GCDTGPENWGGS*ANICINYQRAG Trigger: CCCAGCCCTCTGGTAGTTTATGCAAATATTCGCCAAGGAGCCTCCCCAATTCTCAGGGCCAGTGTCACAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS CAA 72 bp | ACTGCCCCCGTGAATTTCCGCCTTCAGGTCGGTGATTaGGCCAGGTGGGAAGAGATCAGGTATGGGAGCATT | + |
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Preference number: 6 (lower is better) Translates to: TAPVNFRLQVGD*ARWEEIRYGSI Trigger: AATGCTCCCATACCTGATCTCTTCCCACCTGGCCAAATCACCGACCTGAAGGCGGAAATTCACGGGGGCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS TCA 72 bp | GGACGCACGGGACGTGACAGTCAGGGTCAAGGTTTGTaGGCTTGCTTGCAGACTGTATTTCCAAGTGCCAAC | + |
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Preference number: 6 (lower is better) Translates to: GRTGRDSQGQGL*ACLQTVFPSAN Trigger: GTTGGCACTTGGAAATACAGTCTGCAAGCAAGCTCACAAACCTTGACCCTGACTGTCACGTCCCGTGCGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS TCA 72 bp | GGAGCTGTCCAAGTCAGATTAATGAGACTGCCCCCGTaGATTTCCGCCTTCAGGTCGGTGATTTGGCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: GAVQVRLMRLPP*ISAFRSVIWPG Trigger: ACCTGGCCAAATCACCGACCTGAAGGCGGAAATTCACGGGGGCAGTCTCATTAATCTGACTTGGACAGCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS CCA 72 bp | TCAATCCAGCCAGGTATGTACAGTGCTCCACTCTGCTaGGGTATCACTCTCCGTCTGGCTGCGTTAACTCCT | + |
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Preference number: 6 (lower is better) Translates to: SIQPGMYSAPLC*GITLRLAALTP Trigger: AGGAGTTAACGCAGCCAGACGGAGAGTGATACCCCAGCAGAGTGGAGCACTGTACATACCTGGCTGGATTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS CAA 72 bp | TTTGGCCAGGTGGGAAGAGATCAGGTATGGGAGCATTaGGGACATCAGAAGCCACAAATGAGCCTCCCGAGG | + |
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Preference number: 6 (lower is better) Translates to: FGQVGRDQVWEH*GHQKPQMSLPR Trigger: CCTCGGGAGGCTCATTTGTGGCTTCTGATGTCCCAAATGCTCCCATACCTGATCTCTTCCCACCTGGCCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS TCA 72 bp | AAACCTCCTGTCATTTTGGACAGCTCCTCTAGTTCTTaGGCTGCAGAGGGCCCCAAAGCGACTGTGTGGATG | + |
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Preference number: 6 (lower is better) Translates to: KPPVILDSSSSS*AAEGPKATVWM Trigger: CATCCACACAGTCGCTTTGGGGCCCTCTGCAGCTCAAGAACTAGAGGAGCTGTCCAAAATGACAGGAGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS GCA 72 bp | AAGTGTCCTTTCCCACGGTGCTGTCCACGATCACTGTaGCATTCATCCACTGGCTGTTCTGGAGGGTTAATC | + |
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Preference number: 6 (lower is better) Translates to: KCPFPRCCPRSL*HSSTGCSGGLI Trigger: GATTAACCCTCCAGAACAGCCAGTGGATGAATGGCACAGTGATCGTGGACAGCACCGTGGGAAAGGACACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS GCA 72 bp | TTCTCAATCCAGCCAGGTATGTACAGTGCTCCACTCTaGTGGGGTATCACTCTCCGTCTGGCTGCGTTAACT | + |
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Preference number: 6 (lower is better) Translates to: FSIQPGMYSAPL*WGITLRLAALT Trigger: AGTTAACGCAGCCAGACGGAGAGTGATACCCCAGCAGAGTGGAGCACTGTACATACCTGGCTGGATTGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS CCA 72 bp | TGGACGTCCCTCCTGAAGCTGCTGCAGGTAATCTTTTaGCGAGTGTGTCCCTGTCACTGCCACTGTTTATCT | + |
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Preference number: 6 (lower is better) Translates to: WTSLLKLLQVIF*RVCPCHCHCLS Trigger: AGATAAACAGTGGCAGTGACAGGGACACACTCGCCAAAAGATTACCTGCAGCAGCTTCAGGAGGGACGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS CCA 72 bp | GTGAATTTCCGCCTTCAGGTCGGTGATTTGGCCAGGTaGGAAGAGATCAGGTATGGGAGCATTTGGGACATC | + |
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Preference number: 6 (lower is better) Translates to: VNFRLQVGDLAR*EEIRYGSIWDI Trigger: GATGTCCCAAATGCTCCCATACCTGATCTCTTCCCACCTGGCCAAATCACCGACCTGAAGGCGGAAATTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS CAA 72 bp | ATGGACGTCCCTCCTGAAGCTGCTGCAGGTAATCTTTaGGCGAGTGTGTCCCTGTCACTGCCACTGTTTATC | + |
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Preference number: 6 (lower is better) Translates to: MDVPPEAAAGNL*ASVSLSLPLFI Trigger: GATAAACAGTGGCAGTGACAGGGACACACTCGCCAAAAGATTACCTGCAGCAGCTTCAGGAGGGACGTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS CAA 90 bp | ATTAATGAGACTGCCCCCGTGAATTTCCGCCTTCAGGTCGGTGATTaGGCCAGGTGGGAAGAGATCAGGTATGGGAGCATTTGGGACATC | + |
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Preference number: 6 (lower is better) Translates to: INETAPVNFRLQVGD*ARWEEIRYGSIWDI Trigger: GATGTCCCAAATGCTCCCATACCTGATCTCTTCCCACCTGGCCAAATCACCGACCTGAAGGCGGAAATTCACGGGGGCAGTCTCATTAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS CAA 90 bp | TCCTTGTTCGTTTTGGAAGTCACTGTAATTGGAGGCAGGGTAGCATaGGACGCACGGGACGTGACAGTCAGGGTCAAGGTTTGTGAGCTT | + |
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Preference number: 6 (lower is better) Translates to: SLFVLEVTVIGGRVA*DARDVTVRVKVCEL Trigger: AAGCTCACAAACCTTGACCCTGACTGTCACGTCCCGTGCGTCCAATGCTACCCTGCCTCCAATTACAGTGACTTCCAAAACGAACAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS TCA 72 bp | AGGTATGGGAGCATTTGGGACATCAGAAGCCACAAATaGGCCTCCCGAGGATGTTCTGCTGAAACACACTTG | + |
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Preference number: 6 (lower is better) Translates to: RYGSIWDIRSHK*ASRGCSAETHL Trigger: CAAGTGTGTTTCAGCAGAACATCCTCGGGAGGCTCATTTGTGGCTTCTGATGTCCCAAATGCTCCCATACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS GCA 72 bp | TATTTCATCATTCTCAATCCAGCCAGGTATGTACAGTaGTCCACTCTGCTGGGGTATCACTCTCCGTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: YFIILNPARYVQ*STLLGYHSPSG Trigger: GCCAGACGGAGAGTGATACCCCAGCAGAGTGGAGCACTGTACATACCTGGCTGGATTGAGAATGATGAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS GCA 72 bp | GCCATTTTGGTGTTTTTGTCCACTACAAAGCCACCTTaGTTCTGTCCACTGGGATCCCAGAGAAGGATTTGG | + |
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Preference number: 6 (lower is better) Translates to: AILVFLSTTKPP*FCPLGSQRRIW Trigger: CCAAATCCTTCTCTGGGATCCCAGTGGACAGAAGCAAGGTGGCTTTGTAGTGGACAAAAACACCAAAATGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS GCA 72 bp | GACGTGACAGTCAGGGTCAAGGTTTGTGAGCTTGCTTaGAGACTGTATTTCCAAGTGCCAACCTTAGCAATG | + |
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Preference number: 6 (lower is better) Translates to: DVTVRVKVCELA*RLYFQVPTLAM Trigger: CATTGCTAAGGTTGGCACTTGGAAATACAGTCTGCAAGCAAGCTCACAAACCTTGACCCTGACTGTCACGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS CCA 72 bp | GTTGCCCATCTGCTCAGTGTAGGGTTCATCATTACCTaGAGGAGTAGACTCAGCAACCAGAACATCAGCATT | + |
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Preference number: 6 (lower is better) Translates to: VAHLLSVGFIIT*RSRLSNQNISI Trigger: AATGCTGATGTTCTGGTTGCTGAGTCTACTCCTCCAGGTAATGATGAACCCTACACTGAGCAGATGGGCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS CCA 72 bp | ACAAGGAGCAGACGTTTCATCAGGACTAGGTGTCTCTaGCGGAGTCTGTGGAGGAATAAACAAAGATACTCG | + |
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Preference number: 6 (lower is better) Translates to: TRSRRFIRTRCL*RSLWRNKQRYS Trigger: CGAGTATCTTTGTTTATTCCTCCACAGACTCCGCCAGAGACACCTAGTCCTGATGAAACGTCTGCTCCTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS CAA 72 bp | GGCCATTTTGGTGTTTTTGTCCACTACAAAGCCACCTaGCTTCTGTCCACTGGGATCCCAGAGAAGGATTTG | + |
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Preference number: 6 (lower is better) Translates to: GHFGVFVHYKAT*LLSTGIPEKDL Trigger: CAAATCCTTCTCTGGGATCCCAGTGGACAGAAGCAAGGTGGCTTTGTAGTGGACAAAAACACCAAAATGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS CCA 72 bp | CTCCTTGGCGAATATTTGCATAAACTACCAGAGGGCTaGGGAATTTGCTGGTGTCCTTGTTCGTTTTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LLGEYLHKLPEG*GICWCPCSFWK Trigger: CTTCCAAAACGAACAAGGACACCAGCAAATTCCCCAGCCCTCTGGTAGTTTATGCAAATATTCGCCAAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS TCA 72 bp | CGACAATGCCTTCATAGCCATTGTTGTTCAGCTGAATaGGTGAATTACTCAGGGCCCCTTCTAGAAGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: RQCLHSHCCSAE*VNYSGPLLEGE Trigger: TTCACCTTCTAGAAGGGGCCCTGAGTAATTCACTCATTCAGCTGAACAACAATGGCTATGAAGGCATTGTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS TCA 72 bp | CAGAAGCCACAAATGAGCCTCCCGAGGATGTTCTGCTaGAACACACTTGCTTGTGTTGAACATCATCCTTAT | + |
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Preference number: 6 (lower is better) Translates to: QKPQMSLPRMFC*NTLACVEHHPY Trigger: ATAAGGATGATGTTCAACACAAGCAAGTGTGTTTCAGCAGAACATCCTCGGGAGGCTCATTTGTGGCTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS CAA 72 bp | CCTGTCACTGCCACTGTTTATCTGTATGAGTTCATTTaGTACATGGGCAGCACTGTCAAATGTCACCATCCC | + |
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Preference number: 6 (lower is better) Translates to: PVTATVYLYEFI*YMGSTVKCHHP Trigger: GGGATGGTGACATTTGACAGTGCTGCCCATGTACAAAATGAACTCATACAGATAAACAGTGGCAGTGACAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS CAA 72 bp | TGCAAACATTATAGAAGCCTTCTCCGTCTGGCGGGATaGGAGAACAAACTCACATCCTTTTTCATAGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: CKHYRSLLRLAG*ENKLTSFFIES Trigger: GGACTCTATGAAAAAGGATGTGAGTTTGTTCTCCAATCCCGCCAGACGGAGAAGGCTTCTATAATGTTTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS GCA 72 bp | AAATCGCTTTCCTGTAGCTTCAAGCAGATACAGAGATaGCTGGGTCACCATGTCCTTTATTTGTTGAATGAG | + |
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Preference number: 6 (lower is better) Translates to: KSLSCSFKQIQR*LGHHVLYLLNE Trigger: CTCATTCAACAAATAAAGGACATGGTGACCCAGGCATCTCTGTATCTGCTTGAAGCTACAGGAAAGCGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS CCA 72 bp | ACATGTTGTGCAAACATTATAGAAGCCTTCTCCGTCTaGCGGGATTGGAGAACAAACTCACATCCTTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: TCCANIIEAFSV*RDWRTNSHPFS Trigger: TGAAAAAGGATGTGAGTTTGTTCTCCAATCCCGCCAGACGGAGAAGGCTTCTATAATGTTTGCACAACATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS TCA 72 bp | GGAAGTGGTTTATCACAGGTCTTTAACCCCCTGACCTaGTGTGTTTTACTATTGCTCTTGTCTTCAATAGGA | + |
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Preference number: 6 (lower is better) Translates to: GSGLSQVFNPLT*CVLLLLLSSIG Trigger: TCCTATTGAAGACAAGAGCAATAGTAAAACACATCAGGTCAGGGGGTTAAAGACCTGTGATAAACCACTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000234701.7 |
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| CDS CCA 72 bp | AAGGTGAAGAATCAAGATGAACACAGAACTCTTAAATaGCCCCATTGCTGTACATCTCCCTGTGATTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: KVKNQDEHRTLK*PHCCTSPCDFS Trigger: AGAGAAATCACAGGGAGATGTACAGCAATGGGGCCATTTAAGAGTTCTGTGTTCATCTTGATTCTTCACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS CAA 90 bp | AACATGTTGTGCAAACATTATAGAAGCCTTCTCCGTCTGGCGGGATaGGAGAACAAACTCACATCCTTTTTCATAGAGTCCTGTTACTTT | + |
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Preference number: 6 (lower is better) Translates to: NMLCKHYRSLLRLAG*ENKLTSFFIESCYF Trigger: AAAGTAACAGGACTCTATGAAAAAGGATGTGAGTTTGTTCTCCAATCCCGCCAGACGGAGAAGGCTTCTATAATGTTTGCACAACATGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS TCA 72 bp | TTATCGGAAGTGGTTTATCACAGGTCTTTAACCCCCTaGCCTGATGTGTTTTACTATTGCTCTTGTCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: LSEVVYHRSLTP*PDVFYYCSCLQ Trigger: TTGAAGACAAGAGCAATAGTAAAACACATCAGGTCAGGGGGTTAAAGACCTGTGATAAACCACTTCCGATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000234701.7 |
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| CDS GCA 72 bp | TTAGTCTCAAATTGCGTACTTGTAAATATTTCCATCTaGCTTCAGCTGTGCCAGATGCTTGACATAACCTCA | + |
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Preference number: 6 (lower is better) Translates to: LVSNCVLVNISI*LQLCQMLDITS Trigger: TGAGGTTATGTCAAGCATCTGGCACAGCTGAAGGCAGATGGAAATATTTACAAGTACGCAATTTGAGACTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000234701.7 |
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| CDS GCA 72 bp | GCTGTACATCTCCCTGTGATTTCTCTCTTTGGAAAATaGGGGTTACGAAGGTGTCTTTCTTTACCATTATAT | + |
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Preference number: 6 (lower is better) Translates to: AVHLPVISLFGK*GLRRCLSLPLY Trigger: ATATAATGGTAAAGAAAGACACCTTCGTAACCCGCATTTTCCAAAGAGAGAAATCACAGGGAGATGTACAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000234701.7 |
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| CDS GCA 72 bp | AATCAAGATGAACACAGAACTCTTAAATGGCCCCATTaGTGTACATCTCCCTGTGATTTCTCTCTTTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: NQDEHRTLKWPH*CTSPCDFSLWK Trigger: TTTCCAAAGAGAGAAATCACAGGGAGATGTACAGCAATGGGGCCATTTAAGAGTTCTGTGTTCATCTTGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS CAA 72 bp | TTGTTCTGTACAGAATTCAACTATAGAATCAACATGTaGTGCAAACATTATAGAAGCCTTCTCCGTCTGGCG | + |
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Preference number: 6 (lower is better) Translates to: LFCTEFNYRINM*CKHYRSLLRLA Trigger: CGCCAGACGGAGAAGGCTTCTATAATGTTTGCACAACATGTTGATTCTATAGTTGAATTCTGTACAGAACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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| CDS TCA 72 bp | GATATTTCTGATTTCAGATCGACCTTATCAACAGCCTaGATAGCAATGAAAAGATCTGTGCCATTTTCAAAA | + |
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Preference number: 6 (lower is better) Translates to: DISDFRSTLSTA*IAMKRSVPFSK Trigger: TTTTGAAAATGGCACAGATCTTTTCATTGCTATTCAGGCTGTTGATAAGGTCGATCTGAAATCAGAAATATC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000234701.7 ENST00000394711.2 |
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