RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLBA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000140104

Ensembl transcript IDs: ENST00000389964.7, ENST00000547315.6, ENST00000548178.1, ENST00000548641.5, ENST00000549240.1, ENST00000549584.5, ENST00000550614.5, ENST00000551046.5, ENST00000551606.5

Found 599 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCACCTGCGAGGCTCTGAGGACACAGCACATCTGTACACCCTCATaGTGCCCTGACCACACAGCAGCCAGGGCAGAGTGTGACAGACAG +
Preference number: 1 (lower is better)
Translates to: GTCEALRTQHICTPS*CPDHTAARAECDRQ
Trigger: CTGTCTGTCACACTCTGCCCTGGCTGCTGTGTGGTCAGGGCACCATGAGGGTGTACAGATGTGCTGTGTCCTCAGAGCCTCGCAGGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
3UTR CCA 90 bp GACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGTCTCCCCTTaGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAG +
Preference number: 1 (lower is better)
Translates to: DPDSLSWHPETSVSP*LCQGHILHLLVRPE
Trigger: CTCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGACAGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
3UTR CCA 90 bp CTTGGCTCTGCCCTTCGAAGAGCACAGTTTTCCTTAGCAGATAACTaGGGGAAGCCACGGGCCCACCAGAGGCTCTCGCAGGCCAGTGGT +
Preference number: 1 (lower is better)
Translates to: LGSALRRAQFSLADN*GKPRAHQRLSQASG
Trigger: ACCACTGGCCTGCGAGAGCCTCTGGTGGGCCCGTGGCTTCCCCCAGTTATCTGCTAAGGAAAACTGTGCTCTTCGAAGGGCAGAGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
3UTR CCA 90 bp CCCTTTTCCTCTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTaGACTAAGCAGCCCAGAAGCCATGCCCAGGGTCCATCCCTGGGC +
Preference number: 1 (lower is better)
Translates to: PFSSELMDLATSCSP*TKQPRSHAQGPSLG
Trigger: GCCCAGGGATGGACCCTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAGAGGAAAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
3UTR CCA 90 bp GTGAGGAGTCCTTCAGGCTCTTTGAGGTCACAATCTTCCATGATGTaGCCCTGGCCTCCAGAAAGGTTCTTCTGCGCAGCATCTATTCCG +
Preference number: 1 (lower is better)
Translates to: VRSPSGSLRSQSSMM*PWPPERFFCAASIP
Trigger: CGGAATAGATGCTGCGCAGAAGAACCTTTCTGGAGGCCAGGGCCACATCATGGAAGATTGTGACCTCAAAGAGCCTGAAGGACTCCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
3UTR CCA 90 bp ATTTTAGCAAACGTCGCTATTAAAGAGTGTCAGTTTGAGCTTGCGTaGAGTGAACATCCTTTTCCTTGGAATAGTGATGTGCTGGCCACC +
Preference number: 1 (lower is better)
Translates to: ILANVAIKECQFELA*SEHPFPWNSDVLAT
Trigger: GGTGGCCAGCACATCACTATTCCAAGGAAAAGGATGTTCACTCCACGCAAGCTCAAACTGACACTCTTTAATAGCGACGTTTGCTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
3UTR-3UTR TCA 90 bp GGGAAGCCACGGGCCCACCAGAGGCTCTCGCAGGCCAGTGGTGCGACCTCCTGTGGCCCAGGCAGTAAGTaGGGGCACCTGCGAGGCTCT +
Preference number: 2 (lower is better)
Translates to: GKPRAHQRLSQASGATSCGPGSK*GHLRGS
Trigger: AGAGCCTCGCAGGTGCCCTCACTTACTGCCTGGGCC...ACAGGAGGTCGCACCACTGGCCTGCGAGAGCCTCTGGTGGGCCCGTGGCTTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
3UTR-3UTR GCA 90 bp TGTCTCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGATCAGCCTCCCCTGTTTaGTGCCAGGCGGCCCCGAGA +
Preference number: 2 (lower is better)
Translates to: CLPLALPRTHPPSPGQTRSASPV*CQAAPR
Trigger: TCTCGGGGCCGCCTGGCAGCAAACAGGGGAGGCTGA...TCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
3UTR-3UTR CCA 90 bp CTCCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGCTGGGCAGGCCCATGAGTGCCACCTaGACCCCGACAGCCTGTCAT +
Preference number: 2 (lower is better)
Translates to: LLSTTVRDKGLSLRLLGRPMSAT*TPTACH
Trigger: ATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGG...CCTGCCCAGCAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
3UTR-3UTR GCA 90 bp AGGGCAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCGCCTCCCCTGTTTGCTaGCAGGCGGCCCCGAGAGCT +
Preference number: 2 (lower is better)
Translates to: RAECDRQRVSERSQQLSLASPVC*QAAPRA
Trigger: AGCTCTCGGGGCCGCCTGGCAGCAAACAGGGGAGGC...GAGAGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
3UTR-3UTR CCA 90 bp GAGGCTCTCGCAGGCCAGTGGTGCGACCTCCTGTCCACAACCGTGAGGGACAAAGGAATAGTGATGTGCTaGCCACCTCCGCATGAGGGG +
Preference number: 2 (lower is better)
Translates to: EALAGQWCDLLSTTVRDKGIVMC*PPPHEG
Trigger: CCCCTCATGCGGAGGTGGCCAGCACATCACTATTCC...TTTGTCCCTCACGGTTGTGGACAGGAGGTCGCACCACTGGCCTGCGAGAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389964.7
3UTR-3UTR GCA 90 bp TCTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAGCCTCCCCTGTTTGCTaGCAGGCGGCCCCGAGAGCT +
Preference number: 2 (lower is better)
Translates to: SELMDLATSCSPWTKQPRASPVC*QAAPRA
Trigger: AGCTCTCGGGGCCGCCTGGCAGCAAACAGGGGAGGC...TCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
3UTR-3UTR CCA 90 bp GCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGGGTCCACCCGAGAGCTTGGTCTaGATCAGGGCTTTGCAATGC +
Preference number: 2 (lower is better)
Translates to: ATSCSPWTKQPRSHAQGPPESLV*IRALQC
Trigger: GCATTGCAAAGCCCTGATCCAGACCAAGCTCTCGGG...TGGACCCTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
3UTR-3UTR CCA 90 bp TGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGGGTCACATCCTCCATCTCCTaGTCAGACCCGAGACAAGCC +
Preference number: 2 (lower is better)
Translates to: WPQVAPPGLSSPEAMPRVTSSIS*SDPRQA
Trigger: GGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGT...GACCCTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
3UTR-3UTR GCA 90 bp AGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCTGGTGACGTTTCAGTGCCTTCAGCCTCCCCTGTTTaGTGCCAGGCGGCCCCGAGA +
Preference number: 2 (lower is better)
Translates to: RGFLSGLNSCLSGDVSVPSASPV*CQAAPR
Trigger: TCTCGGGGCCGCCTGGCAGCAAACAGGGGAGGCTGA...AGGCACTGAAACGTCACCAGAGAGACAGCTGTTGAGACCGCTCAGAAACCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
3UTR-3UTR GCA 90 bp CTCCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGCTGGGCAGGGATTTGGCCACAAGTTaGTCCCCCTGGACTAAGCAG +
Preference number: 2 (lower is better)
Translates to: LLSTTVRDKGLSLRLLGRDLATS*SPWTKQ
Trigger: CTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATC...CCTGCCCAGCAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
3UTR-3UTR CCA 90 bp TGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGGGTCAGAAAGAAGTTCTCCTaGCAACGGGACTCGCTCCAG +
Preference number: 2 (lower is better)
Translates to: WPQVAPPGLSSPEAMPRVRKKFS*QRDSLQ
Trigger: CTGGAGCGAGTCCCGTTGCCAGGAGAACTTCTTTCT...GACCCTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
3UTR-3UTR CCA 90 bp TGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCGCGGCCCCGAGAGCTTaGTCTGGATCAGGGCTTTGC +
Preference number: 2 (lower is better)
Translates to: WGLENSSTDSSGFHINPAAAPRA*SGSGLC
Trigger: GCAAAGCCCTGATCCAGACCAAGCTCTCGGGGCCGC...GGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
3UTR-3UTR CCA 90 bp GCCCATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGAGAGATCCCAGGAATaGGCCTGGGGTCTGGAAAAC +
Preference number: 2 (lower is better)
Translates to: AHECHLDPDSLSWHPETSERSQE*AWGLEN
Trigger: GTTTTCCAGACCCCAGGCCCATTCCTGGGATCTCTC...AGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
3UTR-3UTR CCA 90 bp GACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCAGAACACAGGACAGGAGAGATCCCAGGAATaGGCCTGGGGTCTGGAAAAC +
Preference number: 2 (lower is better)
Translates to: DTSSISWSDPRQAQNTGQERSQE*AWGLEN
Trigger: GTTTTCCAGACCCCAGGCCCATTCCTGGGATCTCTC...CTGTCCTGTGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
3UTR-3UTR CCA 90 bp CTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCAGAACACAGGACAGGTCCTGTTaGAGAGATCCCAGGAATGGG +
Preference number: 2 (lower is better)
Translates to: LPRTHPPSPGQTRDKPRTQDRSC*RDPRNG
Trigger: CCCATTCCTGGGATCTCTCCAACAGGACCTGTCCTG...TGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
3UTR-3UTR CCA 90 bp GCCAGGGCAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTACCTCTGTCTCCCCTTaGCTCTGCCAAGGACACATC +
Preference number: 2 (lower is better)
Translates to: ARAECDRQRVSERSQQLSTSVSP*LCQGHI
Trigger: GATGTGTCCTTGGCAGAGCCAAGGGGAGACAGAGGT...AGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTGCCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
3UTR-3UTR TCA 90 bp TCTGCCCTTCGAAGAGCACAGTTTTCCTTAGCAGATAACTGGGGGAAGCCACGGTCGCTCCAGAGGCGCTaGGAAGTAGACGTGGTGTGT +
Preference number: 2 (lower is better)
Translates to: SALRRAQFSLADNWGKPRSLQRR*EVDVVC
Trigger: ACACACCACGTCTACTTCTCAGCGCCTCTGGAGCGA...CCGTGGCTTCCCCCAGTTATCTGCTAAGGAAAACTGTGCTCTTCGAAGGGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389964.7
3UTR-3UTR GCA 90 bp GCCAGGGCAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTTGGAATAGTGATGTaGTGGCCACCTCCGCATGAG +
Preference number: 2 (lower is better)
Translates to: ARAECDRQRVSERSQQLSLGIVM*WPPPHE
Trigger: CTCATGCGGAGGTGGCCAGCACATCACTATTCCAAG...AGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTGCCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
3UTR-3UTR CCA 90 bp GCAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCTGGCAGGACAGGTCCTGTTaGAGAGATCCCAGGAATGGG +
Preference number: 2 (lower is better)
Translates to: AECDRQRVSERSQQLSLWQDRSC*RDPRNG
Trigger: CCCATTCCTGGGATCTCTCCAACAGGACCTGTCCTG...CCAGAGAGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
3UTR-3UTR CCA 90 bp AGGGCAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCACCTCTGTCTCCCCTTaGCTCTGCCAAGGACACATC +
Preference number: 2 (lower is better)
Translates to: RAECDRQRVSERSQQLSLTSVSP*LCQGHI
Trigger: GATGTGTCCTTGGCAGAGCCAAGGGGAGACAGAGGT...GAGAGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
3UTR CAA 90 bp TGCTGGAGACAGAAGCTGCTGACAGTGAGGAGTCCTTCAGGCTCTTaGAGGTCACAATCTTCCATGATGTGGCCCTGGCCTCCAGAAAGG +
Preference number: 2 (lower is better)
Translates to: CWRQKLLTVRSPSGS*RSQSSMMWPWPPER
Trigger: CCTTTCTGGAGGCCAGGGCCACATCATGGAAGATTGTGACCTCAAAGAGCCTGAAGGACTCCTCACTGTCAGCAGCTTCTGTCTCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
3UTR-3UTR TCA 90 bp TTCAGGCTCTTTGAGGTCACAATCTTCCATGATGTGGCCCTGGCCTCCAGAAAGTCGCTCCAGAGGCGCTaGGAAGTAGACGTGGTGTGT +
Preference number: 2 (lower is better)
Translates to: FRLFEVTIFHDVALASRKSLQRR*EVDVVC
Trigger: ACACACCACGTCTACTTCTCAGCGCCTCTGGAGCGA...CTTTCTGGAGGCCAGGGCCACATCATGGAAGATTGTGACCTCAAAGAGCCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
3UTR-3UTR GCA 90 bp TGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCATCAGGGCTTTGCAATaGTGGAGACAGAAGCTGCTG +
Preference number: 2 (lower is better)
Translates to: WGLENSSTDSSGFHINPAIRALQ*WRQKLL
Trigger: CAGCAGCTTCTGTCTCCAGCATTGCAAAGCCCTGAT...GGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
3UTR-3UTR TCA 90 bp CAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCTGGTGTGGTGTGTATGCTCTaGAGGGCTCTCCAGAGTTTT +
Preference number: 2 (lower is better)
Translates to: QSVTDRGFLSGLNSCLSGVVCML*RALQSF
Trigger: AAAACTCTGGAGAGCCCTTCAGAGCATACACACCAC...ACCAGAGAGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
3UTR-3UTR GCA 90 bp GCAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCTGGCCAGAAAGGTTCTTCTaGGCAGCATCTATTCCGAGA +
Preference number: 2 (lower is better)
Translates to: AECDRQRVSERSQQLSLWPERFF*AASIPR
Trigger: TCTCGGAATAGATGCTGCGCAGAAGAACCTTTCTGG...CCAGAGAGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
3UTR-3UTR GCA 90 bp CTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAACCAGAAAGGTTCTTCTaGGCAGCATCTATTCCGAGA +
Preference number: 2 (lower is better)
Translates to: LNSWIWPQVAPPGLSSPEPERFF*AASIPR
Trigger: TCTCGGAATAGATGCTGCGCAGAAGAACCTTTCTGG...TTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
3UTR-3UTR CCA 90 bp GCTGCTGACAGTGAGGAGTCCTTCAGGCTCTTTGAGGTCACAATCTTCCATGATAGAAAGAAGTTCTCCTaGCAACGGGACTCGCTCCAG +
Preference number: 2 (lower is better)
Translates to: AADSEESFRLFEVTIFHDRKKFS*QRDSLQ
Trigger: CTGGAGCGAGTCCCGTTGCCAGGAGAACTTCTTTCT...ATCATGGAAGATTGTGACCTCAAAGAGCCTGAAGGACTCCTCACTGTCAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
3UTR-3UTR TCA 90 bp TTTTCCTCTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGGTGGTGTGTATGCTCTaGAGGGCTCTCCAGAGTTTT +
Preference number: 2 (lower is better)
Translates to: FSSELMDLATSCSPWTKQVVCML*RALQSF
Trigger: AAAACTCTGGAGAGCCCTTCAGAGCATACACACCAC...CTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAGAGGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
3UTR-3UTR CCA 90 bp TCTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGACTCTCCAGAGTTTTCTaGATTCGTTACTCGAGCTTC +
Preference number: 2 (lower is better)
Translates to: SELMDLATSCSPWTKQPRLSRVF*IRYSSF
Trigger: GAAGCTCGAGTAACGAATCCAGAAAACTCTGGAGAG...TCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389964.7
3UTR GCA 72 bp GGAAGCGGCTGCATGTCATCAGCCTCCCCTGTTTGCTaGCAGGCGGCCCCGAGAGCTTGGTCTGGATCAGGG +
Preference number: 3 (lower is better)
Translates to: GSGCMSSASPVC*QAAPRAWSGSG
Trigger: CCCTGATCCAGACCAAGCTCTCGGGGCCGCCTGGCAGCAAACAGGGGAGGCTGATGACATGCAGCCGCTTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
3UTR GCA 72 bp GGCCACCTCCGCATGAGGGGGTCTTCAGGAAGCGGCTaGATGTCATCAGCCTCCCCTGTTTGCTGCCAGGCG +
Preference number: 3 (lower is better)
Translates to: GHLRMRGSSGSG*MSSASPVCCQA
Trigger: CGCCTGGCAGCAAACAGGGGAGGCTGATGACATGCAGCCGCTTCCTGAAGACCCCCTCATGCGGAGGTGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
3UTR CCA 72 bp GAAGCCACGGGCCCACCAGAGGCTCTCGCAGGCCAGTaGTGCGACCTCCTGTCCACAACCGTGAGGGACAAA +
Preference number: 3 (lower is better)
Translates to: EATGPPEALAGQ*CDLLSTTVRDK
Trigger: TTTGTCCCTCACGGTTGTGGACAGGAGGTCGCACCACTGGCCTGCGAGAGCCTCTGGTGGGCCCGTGGCTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
3UTR-3UTR CAA 90 bp GTCTCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAGGGCGGCCCCGAGAGCTaGGTCTGGATCAGGGCTTTG +
Preference number: 3 (lower is better)
Translates to: VSPWLCQGHILHLLVRPEGGPES*VWIRAL
Trigger: CAAAGCCCTGATCCAGACCAAGCTCTCGGGGCCGCC...CTCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
3UTR-3UTR CAA 90 bp TGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCATCAGCCTCCCCTGTTaGCTGCCAGGCGGCCCCGAG +
Preference number: 3 (lower is better)
Translates to: WGLENSSTDSSGFHINPAISLPC*LPGGPE
Trigger: CTCGGGGCCGCCTGGCAGCAAACAGGGGAGGCTGAT...GGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
3UTR CCA 72 bp CCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTaGTCAGACCCGAGACAAGCCCAGAACACAGGACAG +
Preference number: 3 (lower is better)
Translates to: PLGSAKDTSSIS*SDPRQAQNTGQ
Trigger: CTGTCCTGTGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
3UTR CCA 72 bp GAGGCTCTGAGGACACAGCACATCTGTACACCCTCATaGTGCCCTGACCACACAGCAGCCAGGGCAGAGTGT +
Preference number: 3 (lower is better)
Translates to: EALRTQHICTPS*CPDHTAARAEC
Trigger: ACACTCTGCCCTGGCTGCTGTGTGGTCAGGGCACCATGAGGGTGTACAGATGTGCTGTGTCCTCAGAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
3UTR CCA 72 bp GCCCTTCGAAGAGCACAGTTTTCCTTAGCAGATAACTaGGGGAAGCCACGGGCCCACCAGAGGCTCTCGCAG +
Preference number: 3 (lower is better)
Translates to: ALRRAQFSLADN*GKPRAHQRLSQ
Trigger: CTGCGAGAGCCTCTGGTGGGCCCGTGGCTTCCCCCAGTTATCTGCTAAGGAAAACTGTGCTCTTCGAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
3UTR-3UTR CAA 90 bp TTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGGGTACAGGACAGGTCCTGTaGGAGAGATCCCAGGAATGG +
Preference number: 3 (lower is better)
Translates to: LATSCSPWTKQPRSHAQGTGQVL*ERSQEW
Trigger: CCATTCCTGGGATCTCTCCAACAGGACCTGTCCTGT...ACCCTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
3UTR GCA 72 bp GGCCCCGAGAGCTTGGTCTGGATCAGGGCTTTGCAATaGTGGAGACAGAAGCTGCTGACAGTGAGGAGTCCT +
Preference number: 3 (lower is better)
Translates to: GPESLVWIRALQ*WRQKLLTVRSP
Trigger: AGGACTCCTCACTGTCAGCAGCTTCTGTCTCCAGCATTGCAAAGCCCTGATCCAGACCAAGCTCTCGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
3UTR CCA 72 bp ACCCGAGACAAGCCCAGAACACAGGACAGGTCCTGTTaGAGAGATCCCAGGAATGGGCCTGGGGTCTGGAAA +
Preference number: 3 (lower is better)
Translates to: TRDKPRTQDRSC*RDPRNGPGVWK
Trigger: TTTCCAGACCCCAGGCCCATTCCTGGGATCTCTCCAACAGGACCTGTCCTGTGTTCTGGGCTTGTCTCGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
3UTR-3UTR CAA 90 bp TGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGGGTCAGTGTCAGTTTGAGCTaGCGTGGAGTGAACATCCTT +
Preference number: 3 (lower is better)
Translates to: WPQVAPPGLSSPEAMPRVSVSLS*RGVNIL
Trigger: AAGGATGTTCACTCCACGCAAGCTCAAACTGACACT...GACCCTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
3UTR-3UTR CAA 90 bp GCCAGGGCAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTACAGGACAGGTCCTGTaGGAGAGATCCCAGGAATGG +
Preference number: 3 (lower is better)
Translates to: ARAECDRQRVSERSQQLSTGQVL*ERSQEW
Trigger: CCATTCCTGGGATCTCTCCAACAGGACCTGTCCTGT...AGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTGCCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
3UTR-3UTR CAA 90 bp TTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGGGTAGTGTCAGTTTGAGCTaGCGTGGAGTGAACATCCTT +
Preference number: 3 (lower is better)
Translates to: LATSCSPWTKQPRSHAQGSVSLS*RGVNIL
Trigger: AAGGATGTTCACTCCACGCAAGCTCAAACTGACACT...ACCCTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
3UTR GCA 72 bp CCCTTTTCCTCTGAACTCATGGATTTGGCCACAAGTTaGTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCC +
Preference number: 3 (lower is better)
Translates to: PFSSELMDLATS*SPWTKQPRSHA
Trigger: GGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAGAGGAAAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
3UTR CCA 72 bp GGAGTGAACATCCTTTTCCTTGGAATAGTGATGTGCTaGCCACCTCCGCATGAGGGGGTCTTCAGGAAGCGG +
Preference number: 3 (lower is better)
Translates to: GVNILFLGIVMC*PPPHEGVFRKR
Trigger: CCGCTTCCTGAAGACCCCCTCATGCGGAGGTGGCCAGCACATCACTATTCCAAGGAAAAGGATGTTCACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
3UTR-3UTR CAA 90 bp AGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCTGGTGACGTTTCAGTGCCTACAGGACAGGTCCTGTaGGAGAGATCCCAGGAATGG +
Preference number: 3 (lower is better)
Translates to: RGFLSGLNSCLSGDVSVPTGQVL*ERSQEW
Trigger: CCATTCCTGGGATCTCTCCAACAGGACCTGTCCTGT...AGGCACTGAAACGTCACCAGAGAGACAGCTGTTGAGACCGCTCAGAAACCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
3UTR GCA 72 bp CGTGGAGTGAACATCCTTTTCCTTGGAATAGTGATGTaGTGGCCACCTCCGCATGAGGGGGTCTTCAGGAAG +
Preference number: 3 (lower is better)
Translates to: RGVNILFLGIVM*WPPPHEGVFRK
Trigger: CTTCCTGAAGACCCCCTCATGCGGAGGTGGCCAGCACATCACTATTCCAAGGAAAAGGATGTTCACTCCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
3UTR TCA 72 bp AGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCTGGTaGCGTTTCAGTGCCTTCCCCTTTTCCTCTGAACTC +
Preference number: 3 (lower is better)
Translates to: RVSERSQQLSLW*RFSAFPFSSEL
Trigger: GAGTTCAGAGGAAAAGGGGAAGGCACTGAAACGTCACCAGAGAGACAGCTGTTGAGACCGCTCAGAAACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
3UTR-3UTR CAA 90 bp CAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCTGGTAGTCCTTCAGGCTCTTaGAGGTCACAATCTTCCATG +
Preference number: 3 (lower is better)
Translates to: QSVTDRGFLSGLNSCLSGSPSGS*RSQSSM
Trigger: CATGGAAGATTGTGACCTCAAAGAGCCTGAAGGACT...ACCAGAGAGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
3UTR CCA 72 bp GGCTCTTTGAGGTCACAATCTTCCATGATGTGGCCCTaGCCTCCAGAAAGGTTCTTCTGCGCAGCATCTATT +
Preference number: 3 (lower is better)
Translates to: GSLRSQSSMMWP*PPERFFCAASI
Trigger: AATAGATGCTGCGCAGAAGAACCTTTCTGGAGGCCAGGGCCACATCATGGAAGATTGTGACCTCAAAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
3UTR CCA 72 bp AACGTCGCTATTAAAGAGTGTCAGTTTGAGCTTGCGTaGAGTGAACATCCTTTTCCTTGGAATAGTGATGTG +
Preference number: 3 (lower is better)
Translates to: NVAIKECQFELA*SEHPFPWNSDV
Trigger: CACATCACTATTCCAAGGAAAAGGATGTTCACTCCACGCAAGCTCAAACTGACACTCTTTAATAGCGACGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR CCA 90 bp CCCACCAGAGGCTCTCGCAGGCCAGTGGTGCGACCTCCTGTCCACAACCGTGAGGGACAGGGCCCGAGGTaGCCGGCTAAGCGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PTRGSRRPVVRPPVHNREGQGPR*PAKRLA
Trigger: GGCCAGGCGCTTAGCCGGCCACCTCGGGCCCTGTCC...CTCACGGTTGTGGACAGGAGGTCGCACCACTGGCCTGCGAGAGCCTCTGGTGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS-3UTR GCA 90 bp CACCAGGTGCCAGCAGCATTCACATGGGGCAGGGGGCCCATGAGTGCCACCTGGGCTGCTCAGGAGACATaGACGCCGGGGTGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: HQVPAAFTWGRGPMSATWAAQET*TPGCWP
Trigger: CGGCCAGCACCCCGGCGTGCATGTCTCCTGAGCAGC...CCAGGTGGCACTCATGGGCCCCCTGCCCCATGTGAATGCTGCTGGCACCTGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR TCA 90 bp CAGGTGCCAGCAGCATTCACATGGGGCAGGGGGCCCATGAGTGCCACCTGGACCACAAAGGCCTGTCCTTaGGGCTGCTGGGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: QVPAAFTWGRGPMSATWTTKACP*GCWAGA
Trigger: GGCCCCTGCCCAGCAGCCTCAAGGACAGGCCTTTGT...GGTCCAGGTGGCACTCATGGGCCCCCTGCCCCATGTGAATGCTGCTGGCACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR GCA 90 bp TGGTGCGACCTCCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGGGGACGCTGCAGGAGTaGCCCGGGCTGCCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: WCDLLSTTVRDKGLSLRLGTLQE*PGLPSG
Trigger: GCCACTGGGCAGCCCGGGGCACTCCTGCAGCGTCCC...CAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGGAGGTCGCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000547315.6
CDS-3UTR GCA 90 bp AGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGTCTCCCGGGACGCTGCAGGAGTaGCCCGGGCTGCCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: SATWTPTACHGIQKPLSPGTLQE*PGLPSG
Trigger: GCCACTGGGCAGCCCGGGGCACTCCTGCAGCGTCCC...GGGAGACAGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000547315.6
CDS-3UTR GCA 90 bp CAGGTGCCAGCAGCATTCACATGGGGCAGGGGGCCCATGAGTGCCACCTGGACCTCAGCCTCCCCTGTTTaGTGCCAGGCGGCCCCGAGA +
Preference number: 4 (lower is better)
Translates to: QVPAAFTWGRGPMSATWTSASPV*CQAAPR
Trigger: TCTCGGGGCCGCCTGGCAGCAAACAGGGGAGGCTGA...GGTCCAGGTGGCACTCATGGGCCCCCTGCCCCATGTGAATGCTGCTGGCACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR GCA 90 bp CCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGCTGGGCAGGGGCAGGGGGCCCATGAGTaGCACCTGGACCCCGACAGC +
Preference number: 4 (lower is better)
Translates to: PVHNREGQRPVLEAAGQGQGAHE*HLDPDS
Trigger: GCTGTCGGGGTCCAGGTGGCACTCATGGGCCCCCTG...CCCCTGCCCAGCAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR CCA 90 bp CGACCTCCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGCTGGGTGCACGCCGGGGTGCTaGCCGCCCAGGACTGCCCAA +
Preference number: 4 (lower is better)
Translates to: RPPVHNREGQRPVLEAAGCTPGC*PPRTAQ
Trigger: TTGGGCAGTCCTGGGCGGCCAGCACCCCGGCGTGCA...CCCAGCAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGGAGGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000547315.6
CDS-3UTR CCA 90 bp TGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGGGTCTGGAACGCCTGGGCCTaGACAGGGCCCGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: WPQVAPPGLSSPEAMPRVWNAWA*TGPEVA
Trigger: GGCCACCTCGGGCCCTGTCCAGGCCCAGGCGTTCCA...GACCCTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS-3UTR CCA 90 bp CTGTCTCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGCCAAGTGGGAAGGAGTaGGTGCGGCGCCCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: LSPLGSAKDTSSISWSDPPSGKE*VRRPGA
Trigger: GGCCCCGGGGCGCCGCACCCACTCCTTCCCACTTGG...CGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS-3UTR CCA 90 bp CCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGCTGGGCAGGGGCGCGGGAGTCCCAAGTaGGAAGGAGTGGGTGCGGCG +
Preference number: 4 (lower is better)
Translates to: PVHNREGQRPVLEAAGQGRGSPK*EGVGAA
Trigger: CGCCGCACCCACTCCTTCCCACTTGGGACTCCCGCG...CCCCTGCCCAGCAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS-3UTR GCA 90 bp GCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGGGTCCAGCCTCCCCTGTTTGCTaGCAGGCGGCCCCGAGAGCT +
Preference number: 4 (lower is better)
Translates to: ATSCSPWTKQPRSHAQGPASPVC*QAAPRA
Trigger: AGCTCTCGGGGCCGCCTGGCAGCAAACAGGGGAGGC...TGGACCCTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp GCCCATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGGCCGGCTAAGCGCCTaGCCCACGGCTCCCGAGAGT +
Preference number: 4 (lower is better)
Translates to: AHECHLDPDSLSWHPETSGRLSA*PTAPES
Trigger: ACTCTCGGGAGCCGTGGGCCAGGCGCTTAGCCGGCC...AGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS-3UTR CCA 90 bp GCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGGGTCCACCCGCAGAGCAGCCCTaGAACGCCTGGGCCTGGACA +
Preference number: 4 (lower is better)
Translates to: ATSCSPWTKQPRSHAQGPPAEQP*NAWAWT
Trigger: TGTCCAGGCCCAGGCGTTCCAGGGCTGCTCTGCGGG...TGGACCCTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS-3UTR CCA 90 bp CCCATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGGTGGGGCTCCTGCTCTaGAGAGAGCCGCGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: PMSATWTPTACHGIQKPLVGLLL*REPRGG
Trigger: GCCCCCTCGCGGCTCTCTCCAGAGCAGGAGCCCCAC...CAGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS-3UTR CCA 90 bp CAGGTGCCAGCAGCATTCACATGGGGCAGGGGGCCCATGAGTGCCACCTGGACCCACAAACCACAGGAATaGCCCGGTCGCCCGGGAGTC +
Preference number: 4 (lower is better)
Translates to: QVPAAFTWGRGPMSATWTHKPQE*PGRPGV
Trigger: GACTCCCGGGCGACCGGGCCATTCCTGTGGTTTGTG...GGTCCAGGTGGCACTCATGGGCCCCCTGCCCCATGTGAATGCTGCTGGCACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS-3UTR TCA 90 bp GCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGGGTCCAGGCCCAGGCAGTAAGTaGGGGCACCTGCGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: ATSCSPWTKQPRSHAQGPGPGSK*GHLRGS
Trigger: AGAGCCTCGCAGGTGCCCTCACTTACTGCCTGGGCC...TGGACCCTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR TCA 90 bp CTCCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGCTGGGCAGGACAAAGGCCTGTCCTTaGGGCTGCTGGGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: LLSTTVRDKGLSLRLLGRTKACP*GCWAGA
Trigger: GGCCCCTGCCCAGCAGCCTCAAGGACAGGCCTTTGT...CCTGCCCAGCAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR GCA 90 bp CTCTGTCTCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCACATGCACGCCGGGGTaGTGGCCGCCCAGGACTGCC +
Preference number: 4 (lower is better)
Translates to: LCLPLALPRTHPPSPGQTTCTPG*WPPRTA
Trigger: GGCAGTCCTGGGCGGCCAGCACCCCGGCGTGCATGT...GGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGACAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR GCA 90 bp CTCCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGCTGGGCAGGGGCCCGATGGGCAGCTaGTCAGGAGACATGCACGCC +
Preference number: 4 (lower is better)
Translates to: LLSTTVRDKGLSLRLLGRGPMGS*SGDMHA
Trigger: GGCGTGCATGTCTCCTGAGCAGCTGCCCATCGGGCC...CCTGCCCAGCAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000547315.6
CDS-3UTR GCA 90 bp AGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGTCTCCCGCCTCCCCTGTTTGCTaGCAGGCGGCCCCGAGAGCT +
Preference number: 4 (lower is better)
Translates to: SATWTPTACHGIQKPLSPASPVC*QAAPRA
Trigger: AGCTCTCGGGGCCGCCTGGCAGCAAACAGGGGAGGC...GGGAGACAGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR GCA 90 bp GCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGGGTCCATCAGCCTCCCCTGTTTaGTGCCAGGCGGCCCCGAGA +
Preference number: 4 (lower is better)
Translates to: ATSCSPWTKQPRSHAQGPSASPV*CQAAPR
Trigger: TCTCGGGGCCGCCTGGCAGCAAACAGGGGAGGCTGA...TGGACCCTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR GCA 90 bp GGGCCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCCGTTCCCTCCTGCCTaGGCCGCCCCGTTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GPGVWKTAPQTALVSTSTPFPPA*AAPLPG
Trigger: GCCAGGCAACGGGGCGGCGCAGGCAGGAGGGAACGG...GGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000551606.5
CDS-3UTR CCA 90 bp CCAGGTGCCAGCAGCATTCACATGGGGCAGGGGGCCCATGAGTGCCACCTGGACCGCCCTCACGGGGCATaGAGATGCTGGCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: PGASSIHMGQGAHECHLDRPHGA*RCWLSH
Trigger: ATGGGAAAGCCAGCATCTCCATGCCCCGTGAGGGCG...GTCCAGGTGGCACTCATGGGCCCCCTGCCCCATGTGAATGCTGCTGGCACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CCA 90 bp GACCTCCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGCTGGGCATCGGGCAGTGCAGGTaGAACCGCCCTCACGGGGCA +
Preference number: 4 (lower is better)
Translates to: DLLSTTVRDKGLSLRLLGIGQCR*NRPHGA
Trigger: TGCCCCGTGAGGGCGGTTCCACCTGCACTGCCCGAT...GCCCAGCAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGGAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000547315.6
CDS-3UTR CCA 90 bp AGCCACGGGCCCACCAGAGGCTCTCGCAGGCCAGTGGTGCGACCTCCTGTCCACCAGGACAGGTCCTGTTaGAGAGATCCCAGGAATGGG +
Preference number: 4 (lower is better)
Translates to: SHGPTRGSRRPVVRPPVHQDRSC*RDPRNG
Trigger: CCCATTCCTGGGATCTCTCCAACAGGACCTGTCCTG...GTGGACAGGAGGTCGCACCACTGGCCTGCGAGAGCCTCTGGTGGGCCCGTGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR CCA 90 bp CAGGTGCCAGCAGCATTCACATGGGGCAGGGGGCCCATGAGTGCCACCTGGACCCCAGCAGCATTCACATaGGGCAGGGGGCCCATGAGT +
Preference number: 4 (lower is better)
Translates to: QVPAAFTWGRGPMSATWTPAAFT*GRGPMS
Trigger: ACTCATGGGCCCCCTGCCCCATGTGAATGCTGCTGG...GGTCCAGGTGGCACTCATGGGCCCCCTGCCCCATGTGAATGCTGCTGGCACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp CCAGGTGCCAGCAGCATTCACATGGGGCAGGGGGCCCATGAGTGCCACCTGGACCCAGCAGCATTCACATaGGGCAGGGGGCCCATGAGT +
Preference number: 4 (lower is better)
Translates to: PGASSIHMGQGAHECHLDPAAFT*GRGPMS
Trigger: ACTCATGGGCCCCCTGCCCCATGTGAATGCTGCTGG...GTCCAGGTGGCACTCATGGGCCCCCTGCCCCATGTGAATGCTGCTGGCACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR TCA 90 bp CCCATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGGGCCCAGGCAGTAAGTaGGGGCACCTGCGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PMSATWTPTACHGIQKPLGPGSK*GHLRGS
Trigger: AGAGCCTCGCAGGTGCCCTCACTTACTGCCTGGGCC...CAGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR GCA 90 bp CCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGAGCTCCCGCCGGCCTTaGATCTTGGAGCCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PLALPRTHPPSPGQTRDKSSRRP*ILEPPG
Trigger: GCCTGGGGGCTCCAAGATGCAAGGCCGGCGGGAGCT...CTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CCA 90 bp CCCATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGGCCGGCCTTGCATCTTaGAGCCCCCAGGCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: PMSATWTPTACHGIQKPLAGLAS*SPQASR
Trigger: TCTGCTGGCCTGGGGGCTCCAAGATGCAAGGCCGGC...CAGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CCA 90 bp GCCCATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGCCGGCCTTGCATCTTaGAGCCCCCAGGCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: AHECHLDPDSLSWHPETSAGLAS*SPQASR
Trigger: TCTGCTGGCCTGGGGGCTCCAAGATGCAAGGCCGGC...AGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CCA 90 bp AGCCACGGGCCCACCAGAGGCTCTCGCAGGCCAGTGGTGCGACCTCCTGTCCACCAATCTTCCATGATGTaGCCCTGGCCTCCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: SHGPTRGSRRPVVRPPVHQSSMM*PWPPER
Trigger: CCTTTCTGGAGGCCAGGGCCACATCATGGAAGATTG...GTGGACAGGAGGTCGCACCACTGGCCTGCGAGAGCCTCTGGTGGGCCCGTGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR CCA 90 bp CACACAGCAGCCAGGGCAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACTGGGAGGCCCACGCTaGCCAGAGGAGCGAGAGCCG +
Preference number: 4 (lower is better)
Translates to: HTAARAECDRQRVSERSQLGGPR*PEEREP
Trigger: CGGCTCTCGCTCCTCTGGCCAGCGTGGGCCTCCCAG...TTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTGCCCTGGCTGCTGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS-3UTR CCA 90 bp AGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGTCTCCCCCCTGGGGCAGGTGCTaGTTGGACCCCAGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: SATWTPTACHGIQKPLSPPWGRC*LDPSRG
Trigger: TCCTCTGCTGGGGTCCAACCAGCACCTGCCCCAGGG...GGGAGACAGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR CCA 90 bp GATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGTCCCCTAGGAGCCTGTaGCCCTGCAGGCAGCACCGG +
Preference number: 4 (lower is better)
Translates to: DLATSCSPWTKQPRSHAQSPRSL*PCRQHR
Trigger: CCGGTGCTGCCTGCAGGGCCACAGGCTCCTAGGGGA...CTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550614.5
CDS-3UTR TCA 90 bp CAGGGGGCCCATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAACAGCTGTCTCTCTGGTaGCGTTTCAGTGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: QGAHECHLDPDSLSWHPEQLSLW*RFSAFP
Trigger: GGGGAAGGCACTGAAACGTCACCAGAGAGACAGCTG...TTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGGCCCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR TCA 90 bp GCAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCTGGGACCCACGGCAGGTGTaGGAGGGGCGGCCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: AECDRQRVSERSQQLSLWDPRQV*EGRPKV
Trigger: CACCTTGGGCCGCCCCTCTCACACCTGCCGTGGGTC...CCAGAGAGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS-3UTR TCA 90 bp GGCCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCGGCTGGGCCTGGGGCTaGCAATGGGGCTCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: GLGSGKQLHRQLWFPHQPGWAWG*QWGSRV
Trigger: CACTCTGGAGCCCCATTGTCAGCCCCAGGCCCAGCC...GGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000550614.5
CDS-3UTR TCA 90 bp CTCCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGCTGGGCAGGATGGCCATCTGCGAGTaGCTGCGGGTGCACTTTCCC +
Preference number: 4 (lower is better)
Translates to: LLSTTVRDKGLSLRLLGRMAICE*LRVHFP
Trigger: GGGAAAGTGCACCCGCAGTCACTCGCAGATGGCCAT...CCTGCCCAGCAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550614.5
CDS-3UTR GCA 90 bp GAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCACATGCACGCCGGGGTaGTGGCCGCCCAGGACTGCC +
Preference number: 4 (lower is better)
Translates to: ELMDLATSCSPWTKQPRSTCTPG*WPPRTA
Trigger: GGCAGTCCTGGGCGGCCAGCACCCCGGCGTGCATGT...GCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR GCA 90 bp GCCAGGGCAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTGCTGCTCAGGAGACATaGACGCCGGGGTGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: ARAECDRQRVSERSQQLSAAQET*TPGCWP
Trigger: CGGCCAGCACCCCGGCGTGCATGTCTCCTGAGCAGC...AGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTGCCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR GCA 90 bp AGGCGGCCCCGAGAGCTTGGTCTGGATCAGGGCTTTGCAATGCTGGAGACAGAAGGCCCGATGGGCAGCTaGTCAGGAGACATGCACGCC +
Preference number: 4 (lower is better)
Translates to: RRPRELGLDQGFAMLETEGPMGS*SGDMHA
Trigger: GGCGTGCATGTCTCCTGAGCAGCTGCCCATCGGGCC...TTCTGTCTCCAGCATTGCAAAGCCCTGATCCAGACCAAGCTCTCGGGGCCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR GCA 90 bp CACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCAGAACACAGGACAGGTAGCTCCCGCCGGCCTTaGATCTTGGAGCCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: HILHLLVRPETSPEHRTGSSRRP*ILEPPG
Trigger: GCCTGGGGGCTCCAAGATGCAAGGCCGGCGGGAGCT...ACCTGTCCTGTGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR GCA 90 bp CCCACCAGAGGCTCTCGCAGGCCAGTGGTGCGACCTCCTGTCCACAACCGTGAGTCTTCAGGAAGCGGCTaGATGTCATCAGCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: PTRGSRRPVVRPPVHNRESSGSG*MSSASP
Trigger: AGGGGAGGCTGATGACATGCAGCCGCTTCCTGAAGA...CTCACGGTTGTGGACAGGAGGTCGCACCACTGGCCTGCGAGAGCCTCTGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR GCA 90 bp AGGACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCAGAACACAGGACCAGGGGGCCCATGAGTaGCACCTGGACCCCGACAGC +
Preference number: 4 (lower is better)
Translates to: RTHPPSPGQTRDKPRTQDQGAHE*HLDPDS
Trigger: GCTGTCGGGGTCCAGGTGGCACTCATGGGCCCCCTG...GTCCTGTGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR GCA 90 bp GGGAAGCCACGGGCCCACCAGAGGCTCTCGCAGGCCAGTGGTGCGACCTCCTGTCTGACTTCTTGGCTCTaGCCTTCGAAGAGCACAGTT +
Preference number: 4 (lower is better)
Translates to: GKPRAHQRLSQASGATSCLTSWL*PSKSTV
Trigger: AACTGTGCTCTTCGAAGGGCAGAGCCAAGAAGTCAG...ACAGGAGGTCGCACCACTGGCCTGCGAGAGCCTCTGGTGGGCCCGTGGCTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR GCA 90 bp GCCCATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGGGCCATCTGGGCAATaGTGGTTGCGGCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: AHECHLDPDSLSWHPETSGPSGQ*WLRPSG
Trigger: CCCAGAAGGCCGCAACCAGCATTGCCCAGATGGCCC...AGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR GCA 90 bp CCCATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGACCCAGGACTCCCCATaGCTCTGGGTCCGCGAGTTG +
Preference number: 4 (lower is better)
Translates to: PMSATWTPTACHGIQKPLTQDSP*LWVREL
Trigger: CAACTCGCGGACCCAGAGGCATGGGGAGTCCTGGGT...CAGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR GCA 90 bp GGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGCCCCTGTGCCCACTaGCCAGGCCCACCAGCCACT +
Preference number: 4 (lower is better)
Translates to: GVWKTAPQTALVSTSTQPGPCAH*PGPPAT
Trigger: AGTGGCTGGTGGGCCTGGGCAGTGGGCACAGGGGCC...TGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550614.5
CDS-3UTR CCA 90 bp TGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCTGCACGCCGGGGTGCTaGCCGCCCAGGACTGCCCAA +
Preference number: 4 (lower is better)
Translates to: WGLENSSTDSSGFHINPACTPGC*PPRTAQ
Trigger: TTGGGCAGTCCTGGGCGGCCAGCACCCCGGCGTGCA...GGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CCA 90 bp AGGGCAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCTGCACGCCGGGGTGCTaGCCGCCCAGGACTGCCCAA +
Preference number: 4 (lower is better)
Translates to: RAECDRQRVSERSQQLSLCTPGC*PPRTAQ
Trigger: TTGGGCAGTCCTGGGCGGCCAGCACCCCGGCGTGCA...GAGAGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CCA 90 bp GCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGGGTCCACGCCCTCACGGGGCATaGAGATGCTGGCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: ATSCSPWTKQPRSHAQGPRPHGA*RCWLSH
Trigger: ATGGGAAAGCCAGCATCTCCATGCCCCGTGAGGGCG...TGGACCCTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CCA 90 bp CTGTCTCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGGTGGTTCTCGGTGGCTaGGGTTCTGTGGGTCCCTCG +
Preference number: 4 (lower is better)
Translates to: LSPLGSAKDTSSISWSDPVVLGG*GSVGPS
Trigger: CGAGGGACCCACAGAACCCCAGCCACCGAGAACCAC...CGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CCA 90 bp GTGCGACCTCCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGCTGCGGCCCCGAGAGCTTaGTCTGGATCAGGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: VRPPVHNREGQRPVLEAAAAPRA*SGSGLC
Trigger: GCAAAGCCCTGATCCAGACCAAGCTCTCGGGGCCGC...AGCAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGGAGGTCGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR CCA 90 bp TTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGGGTGCTCTCGCAGGCCAGTaGTGCGACCTCCTGTCCACA +
Preference number: 4 (lower is better)
Translates to: LATSCSPWTKQPRSHAQGALAGQ*CDLLST
Trigger: TGTGGACAGGAGGTCGCACCACTGGCCTGCGAGAGC...ACCCTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR CCA 90 bp GAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCGTCGCCCGGGAGTCCTaGCTTCCTCCCACGCAGGCG +
Preference number: 4 (lower is better)
Translates to: ELMDLATSCSPWTKQPRSVARES*LPPTQA
Trigger: CGCCTGCGTGGGAGGAAGCCAGGACTCCCGGGCGAC...GCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS-3UTR CCA 90 bp CATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGTCGGGGCAGGTGCTGGTTaGACCCCAGCAGAGGACACG +
Preference number: 4 (lower is better)
Translates to: HECHLDPDSLSWHPETSVGAGAG*TPAEDT
Trigger: CGTGTCCTCTGCTGGGGTCCAACCAGCACCTGCCCC...GACAGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR CCA 90 bp AGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGTCTCCCGACTCCCCATGCCTCTaGGTCCGCGAGTTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SATWTPTACHGIQKPLSPDSPCL*VRELCC
Trigger: GCAGCACAACTCGCGGACCCAGAGGCATGGGGAGTC...GGGAGACAGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR CCA 90 bp CTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCAGAACAACGCAGCGGGGCGCCTaGCCTTTACCCGCAAGCCGA +
Preference number: 4 (lower is better)
Translates to: LPRTHPPSPGQTRDKPRTTQRGA*PLPASR
Trigger: TCGGCTTGCGGGTAAAGGCCAGGCGCCCCGCTGCGT...TGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR CCA 90 bp CCCATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGAGACCCAAGGGGAGCTaGGCTTGGGTCCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PMSATWTPTACHGIQKPLRPKGS*AWVQLL
Trigger: GAGCAGCTGGACCCAAGCCCAGCTCCCCTTGGGTCT...CAGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550614.5
CDS-3UTR TCA 90 bp GACCTCCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGCTGGGCTCCTGTCCACAACCGTaGGGGACAAAGGCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: DLLSTTVRDKGLSLRLLGSCPQP*GTKACP
Trigger: AGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGGA...GCCCAGCAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGGAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR TCA 90 bp CCCACCAGAGGCTCTCGCAGGCCAGTGGTGCGACCTCCTGTCCACAACCGTGAGGTGCTGCTGTGGAACTaGCACAAACCACAGGAATGG +
Preference number: 4 (lower is better)
Translates to: PTRGSRRPVVRPPVHNREVLLWN*HKPQEW
Trigger: CCATTCCTGTGGTTTGTGTCAGTTCCACAGCAGCAC...CTCACGGTTGTGGACAGGAGGTCGCACCACTGGCCTGCGAGAGCCTCTGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS-3UTR TCA 90 bp CAGGTGCCAGCAGCATTCACATGGGGCAGGGGGCCCATGAGTGCCACCTGGACCGGAGTGGAAGCTCCGTaGGACCAGATATTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: QVPAAFTWGRGPMSATWTGVEAP*DQIFCW
Trigger: CCAGCAAAATATCTGGTCTCACGGAGCTTCCACTCC...GGTCCAGGTGGCACTCATGGGCCCCCTGCCCCATGTGAATGCTGCTGGCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR GCA 90 bp AGTCCTTCAGGCTCTTTGAGGTCACAATCTTCCATGATGTGGCCCTGGCCTCCAACATGCACGCCGGGGTaGTGGCCGCCCAGGACTGCC +
Preference number: 4 (lower is better)
Translates to: SPSGSLRSQSSMMWPWPPTCTPG*WPPRTA
Trigger: GGCAGTCCTGGGCGGCCAGCACCCCGGCGTGCATGT...TGGAGGCCAGGGCCACATCATGGAAGATTGTGACCTCAAAGAGCCTGAAGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR GCA 90 bp GTCTCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAGGAGGGAAGCGCTGGCTaGTTCCTCCTGGAGGTCACT +
Preference number: 4 (lower is better)
Translates to: VSPWLCQGHILHLLVRPEEGSAG*FLLEVT
Trigger: AGTGACCTCCAGGAGGAAGCAGCCAGCGCTTCCCTC...CTCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR GCA 90 bp GTTCTCCTGGCAACGGGACTCGCTCCAGAGGCGCTGAGAAGTAGACGTGGTGTGGAGGGAAGCGCTGGCTaGTTCCTCCTGGAGGTCACT +
Preference number: 4 (lower is better)
Translates to: VLLATGLAPEALRSRRGVEGSAG*FLLEVT
Trigger: AGTGACCTCCAGGAGGAAGCAGCCAGCGCTTCCCTC...CACACCACGTCTACTTCTCAGCGCCTCTGGAGCGAGTCCCGTTGCCAGGAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR GCA 90 bp CACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCAGAACACAGGACAGGTTCAGCCTCCCCTGTTTaGTGCCAGGCGGCCCCGAGA +
Preference number: 4 (lower is better)
Translates to: HILHLLVRPETSPEHRTGSASPV*CQAAPR
Trigger: TCTCGGGGCCGCCTGGCAGCAAACAGGGGAGGCTGA...ACCTGTCCTGTGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR GCA 90 bp GAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCAGGGGGCCCATGAGTaGCACCTGGACCCCGACAGC +
Preference number: 4 (lower is better)
Translates to: ELMDLATSCSPWTKQPRSQGAHE*HLDPDS
Trigger: GCTGTCGGGGTCCAGGTGGCACTCATGGGCCCCCTG...GCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR GCA 90 bp CCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCAGGGGGCCCATGAGTaGCACCTGGACCCCGACAGC +
Preference number: 4 (lower is better)
Translates to: PGVWKTAPQTALVSTSTQQGAHE*HLDPDS
Trigger: GCTGTCGGGGTCCAGGTGGCACTCATGGGCCCCCTG...CTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR GCA 90 bp CTCCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGCTGGGCAGGGCTGACGGTGGAAAGTaGCCACGTGCTGCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: LLSTTVRDKGLSLRLLGRADGGK*PRAAVE
Trigger: TTCCACAGCAGCACGTGGGCACTTTCCACCGTCAGC...CCTGCCCAGCAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS-3UTR GCA 90 bp TGGGCCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACAGGAGCCTGTGGCCCTaGAGGCAGCACCGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: WAWGLENSSTDSSGFHINRSLWP*RQHREH
Trigger: GTGCTCCCGGTGCTGCCTGCAGGGCCACAGGCTCCT...GTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550614.5
CDS-3UTR CCA 90 bp GCCAGGGCAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTAACCTTCCCCTGCCCTaGAGAGGGCCAGGGGACGCT +
Preference number: 4 (lower is better)
Translates to: ARAECDRQRVSERSQQLSNLPLP*RGPGDA
Trigger: AGCGTCCCCTGGCCCTCTCCAGGGCAGGGGAAGGTT...AGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTGCCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000547315.6
CDS-3UTR CCA 90 bp CCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCAGCAGAGGCCCGATaGGCAGCTGCTCAGGAGACA +
Preference number: 4 (lower is better)
Translates to: PLALPRTHPPSPGQTRDKPAEAR*AAAQET
Trigger: TGTCTCCTGAGCAGCTGCCCATCGGGCCTCTGCTGG...CTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CCA 90 bp CGACCTCCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGCTGGGGGGGCATGGAGATGCTaGCTTTCCCATCGGACAGGA +
Preference number: 4 (lower is better)
Translates to: RPPVHNREGQRPVLEAAGGAWRC*LSHRTG
Trigger: TCCTGTCCGATGGGAAAGCCAGCATCTCCATGCCCC...CCCAGCAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGGAGGTCG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000547315.6
CDS-3UTR CCA 90 bp GACCTCCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGCTGGGCGTGGCTGGGGTTCTGTaGGTCCCTCGAGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: DLLSTTVRDKGLSLRLLGVAGVL*VPRGVQ
Trigger: TTGAACTCCTCGAGGGACCCACAGAACCCCAGCCAC...GCCCAGCAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGGAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000547315.6
CDS-3UTR CCA 90 bp GATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGGTGGTTCTCGGTGGCTaGGGTTCTGTGGGTCCCTCG +
Preference number: 4 (lower is better)
Translates to: DLATSCSPWTKQPRSHAQVVLGG*GSVGPS
Trigger: CGAGGGACCCACAGAACCCCAGCCACCGAGAACCAC...CTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CCA 90 bp CACCAGGTGCCAGCAGCATTCACATGGGGCAGGGGGCCCATGAGTGCCACCTGGTCCATGATGTGGCCCTaGCCTCCAGAAAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: HQVPAAFTWGRGPMSATWSMMWP*PPERFF
Trigger: GAAGAACCTTTCTGGAGGCCAGGGCCACATCATGGA...CCAGGTGGCACTCATGGGCCCCCTGCCCCATGTGAATGCTGCTGGCACCTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp CCCACCAGAGGCTCTCGCAGGCCAGTGGTGCGACCTCCTGTCCACAACCGTGAGTCCATGATGTGGCCCTaGCCTCCAGAAAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: PTRGSRRPVVRPPVHNRESMMWP*PPERFF
Trigger: GAAGAACCTTTCTGGAGGCCAGGGCCACATCATGGA...CTCACGGTTGTGGACAGGAGGTCGCACCACTGGCCTGCGAGAGCCTCTGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR CCA 90 bp CCCACCAGAGGCTCTCGCAGGCCAGTGGTGCGACCTCCTGTCCACAACCGTGAGCAATCTTCCATGATGTaGCCCTGGCCTCCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: PTRGSRRPVVRPPVHNREQSSMM*PWPPER
Trigger: CCTTTCTGGAGGCCAGGGCCACATCATGGAAGATTG...CTCACGGTTGTGGACAGGAGGTCGCACCACTGGCCTGCGAGAGCCTCTGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR CCA 90 bp CCAGGTGCCAGCAGCATTCACATGGGGCAGGGGGCCCATGAGTGCCACCTGGACCAATCTTCCATGATGTaGCCCTGGCCTCCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: PGASSIHMGQGAHECHLDQSSMM*PWPPER
Trigger: CCTTTCTGGAGGCCAGGGCCACATCATGGAAGATTG...GTCCAGGTGGCACTCATGGGCCCCCTGCCCCATGTGAATGCTGCTGGCACCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp TGTCTCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAGCGGCCCCGAGAGCTTaGTCTGGATCAGGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: CLPLALPRTHPPSPGQTRAAPRA*SGSGLC
Trigger: GCAAAGCCCTGATCCAGACCAAGCTCTCGGGGCCGC...TCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp GATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGGCGGCCCCGAGAGCTTaGTCTGGATCAGGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: DLATSCSPWTKQPRSHAQAAPRA*SGSGLC
Trigger: GCAAAGCCCTGATCCAGACCAAGCTCTCGGGGCCGC...CTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp CGACCTCCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGCTGGGGGAATAGTGATGTGCTaGCCACCTCCGCATGAGGGG +
Preference number: 4 (lower is better)
Translates to: RPPVHNREGQRPVLEAAGGIVMC*PPPHEG
Trigger: CCCCTCATGCGGAGGTGGCCAGCACATCACTATTCC...CCCAGCAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGGAGGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR CCA 90 bp TGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGGGTCGGAATAGTGATGTGCTaGCCACCTCCGCATGAGGGG +
Preference number: 4 (lower is better)
Translates to: WPQVAPPGLSSPEAMPRVGIVMC*PPPHEG
Trigger: CCCCTCATGCGGAGGTGGCCAGCACATCACTATTCC...GACCCTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp CCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGCTGGGCAGGGGCAGGACAGGTCCTGTTaGAGAGATCCCAGGAATGGG +
Preference number: 4 (lower is better)
Translates to: PVHNREGQRPVLEAAGQGQDRSC*RDPRNG
Trigger: CCCATTCCTGGGATCTCTCCAACAGGACCTGTCCTG...CCCCTGCCCAGCAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR CCA 90 bp CTGTCTCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGCCCATGAGTGCCACCTaGACCCCGACAGCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: LSPLGSAKDTSSISWSDPPMSAT*TPTACH
Trigger: ATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGG...CGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp CCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGCTGGGCAGGGGTCAGGGCTGACTTCTTaGCTCTGCCCTTCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: PVHNREGQRPVLEAAGQGSGLTS*LCPSKS
Trigger: GCTCTTCGAAGGGCAGAGCCAAGAAGTCAGCCCTGA...CCCCTGCCCAGCAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR CCA 90 bp TCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAGACACTGGTTGCGGCCTTCTaGGCTCCAGGCCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: SPWLCQGHILHLLVRPETLVAAF*APGLCP
Trigger: AGGACAGAGGCCTGGAGCCCAGAAGGCCGCAACCAG...TGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR TCA 90 bp TGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGGGTCCCCTGGCATGGTTGGTaGGAACTGCACTCTTTTGGG +
Preference number: 4 (lower is better)
Translates to: WPQVAPPGLSSPEAMPRVPWHGW*ELHSFG
Trigger: CCCAAAAGAGTGCAGTTCTCACCAACCATGCCAGGG...GACCCTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR TCA 90 bp GCCCATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGTCTGCAGAGCTCTCTaGAAGTCCAGGCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: AHECHLDPDSLSWHPETSVCRAL*KSRPAQ
Trigger: CTGAGCAGGCCTGGACTTTCAGAGAGCTCTGCAGAC...AGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR GCA 90 bp CAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCTGGTGCTGCTCAGGAGACATaGACGCCGGGGTGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: QSVTDRGFLSGLNSCLSGAAQET*TPGCWP
Trigger: CGGCCAGCACCCCGGCGTGCATGTCTCCTGAGCAGC...ACCAGAGAGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR GCA 90 bp AGGCGGCCCCGAGAGCTTGGTCTGGATCAGGGCTTTGCAATGCTGGAGACAGAAGAGGGAAGCGCTGGCTaGTTCCTCCTGGAGGTCACT +
Preference number: 4 (lower is better)
Translates to: RRPRELGLDQGFAMLETEEGSAG*FLLEVT
Trigger: AGTGACCTCCAGGAGGAAGCAGCCAGCGCTTCCCTC...TTCTGTCTCCAGCATTGCAAAGCCCTGATCCAGACCAAGCTCTCGGGGCCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR GCA 90 bp GTGCGACCTCCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGCTCACGGGGCATGGAGATaGTGGCTTTCCCATCGGACA +
Preference number: 4 (lower is better)
Translates to: VRPPVHNREGQRPVLEAAHGAWR*WLSHRT
Trigger: TGTCCGATGGGAAAGCCAGCATCTCCATGCCCCGTG...AGCAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGGAGGTCGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000547315.6
CDS-3UTR GCA 90 bp TGGTGCGACCTCCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGCACGGGGCATGGAGATaGTGGCTTTCCCATCGGACA +
Preference number: 4 (lower is better)
Translates to: WCDLLSTTVRDKGLSLRLHGAWR*WLSHRT
Trigger: TGTCCGATGGGAAAGCCAGCATCTCCATGCCCCGTG...CAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGGAGGTCGCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000547315.6
CDS-3UTR GCA 90 bp ATGCTGGAGACAGAAGCTGCTGACAGTGAGGAGTCCTTCAGGCTCTTTGAGGTCGCCTCCCCTGTTTGCTaGCAGGCGGCCCCGAGAGCT +
Preference number: 4 (lower is better)
Translates to: MLETEAADSEESFRLFEVASPVC*QAAPRA
Trigger: AGCTCTCGGGGCCGCCTGGCAGCAAACAGGGGAGGC...GACCTCAAAGAGCCTGAAGGACTCCTCACTGTCAGCAGCTTCTGTCTCCAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR GCA 90 bp TCCTTCAGGCTCTTTGAGGTCACAATCTTCCATGATGTGGCCCTGGCCTCCAGAGCCTCCCCTGTTTGCTaGCAGGCGGCCCCGAGAGCT +
Preference number: 4 (lower is better)
Translates to: SFRLFEVTIFHDVALASRASPVC*QAAPRA
Trigger: AGCTCTCGGGGCCGCCTGGCAGCAAACAGGGGAGGC...TCTGGAGGCCAGGGCCACATCATGGAAGATTGTGACCTCAAAGAGCCTGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR GCA 90 bp CCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGTCAGCCTCCCCTGTTTaGTGCCAGGCGGCCCCGAGA +
Preference number: 4 (lower is better)
Translates to: PGVWKTAPQTALVSTSTQSASPV*CQAAPR
Trigger: TCTCGGGGCCGCCTGGCAGCAAACAGGGGAGGCTGA...CTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR GCA 90 bp GCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGGGTCCATCTTCAGGAAGCGGCTaGATGTCATCAGCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: ATSCSPWTKQPRSHAQGPSSGSG*MSSASP
Trigger: AGGGGAGGCTGATGACATGCAGCCGCTTCCTGAAGA...TGGACCCTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR GCA 90 bp TGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGGGTCGTCTCCCCTTGGCTCTaGCAAGGACACATCCTCCAT +
Preference number: 4 (lower is better)
Translates to: WPQVAPPGLSSPEAMPRVVSPWL*QGHILH
Trigger: ATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGAC...GACCCTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR GCA 90 bp CTGAGCGGTCTCAACAGCTGTCTCTCTGGTGACGTTTCAGTGCCTTCCCCTTTTCAGGGGGCCCATGAGTaGCACCTGGACCCCGACAGC +
Preference number: 4 (lower is better)
Translates to: LSGLNSCLSGDVSVPSPFQGAHE*HLDPDS
Trigger: GCTGTCGGGGTCCAGGTGGCACTCATGGGCCCCCTG...AAAAGGGGAAGGCACTGAAACGTCACCAGAGAGACAGCTGTTGAGACCGCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR GCA 90 bp CAGGTGCCAGCAGCATTCACATGGGGCAGGGGGCCCATGAGTGCCACCTGGACCCTGACTTCTTGGCTCTaGCCTTCGAAGAGCACAGTT +
Preference number: 4 (lower is better)
Translates to: QVPAAFTWGRGPMSATWTLTSWL*PSKSTV
Trigger: AACTGTGCTCTTCGAAGGGCAGAGCCAAGAAGTCAG...GGTCCAGGTGGCACTCATGGGCCCCCTGCCCCATGTGAATGCTGCTGGCACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR GCA 90 bp GCCCATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTAGGGCGAGAGAAACCTaGAACCAGCCGTTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: AHECHLDPDSLSWHPETSRARET*NQPFPP
Trigger: AGGAGGGAACGGCTGGTTGCAGGTTTCTCTCGCCCT...AGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS-3UTR GCA 90 bp CACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCAGAACACAGGACAGGTCTGGGCAATGCTGGTTaGGGCCTTCTGGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: HILHLLVRPETSPEHRTGLGNAG*GLLGSR
Trigger: CCTGGAGCCCAGAAGGCCGCAACCAGCATTGCCCAG...ACCTGTCCTGTGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR GCA 90 bp CACCAGGTGCCAGCAGCATTCACATGGGGCAGGGGGCCCATGAGTGCCACCTGGCCAGGGATCATGCTTTaGAGAAGCACCACACACAGA +
Preference number: 4 (lower is better)
Translates to: HQVPAAFTWGRGPMSATWPGIML*RSTTHR
Trigger: TCTGTGTGTGGTGCTTCTGCAAAGCATGATCCCTGG...CCAGGTGGCACTCATGGGCCCCCTGCCCCATGTGAATGCTGCTGGCACCTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR GCA 90 bp TGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCCCCGTGCCCCCTCTATaGCTCACAGCACCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: WGLENSSTDSSGFHINPAPVPPL*LTAPAL
Trigger: CAGGGCAGGTGCTGTGAGGCATAGAGGGGGCACGGG...GGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR GCA 90 bp CAGGTGCCAGCAGCATTCACATGGGGCAGGGGGCCCATGAGTGCCACCTGGACCAAAAACAGCATTCCCTaGAGGAGCACTGGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: QVPAAFTWGRGPMSATWTKNSIP*RSTGLS
Trigger: AGACAGCCCAGTGCTCCTGCAGGGAATGCTGTTTTT...GGTCCAGGTGGCACTCATGGGCCCCCTGCCCCATGTGAATGCTGCTGGCACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR CCA 90 bp TGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAACCTTCCCCTGCCCTaGAGAGGGCCAGGGGACGCT +
Preference number: 4 (lower is better)
Translates to: WGLENSSTDSSGFHINPANLPLP*RGPGDA
Trigger: AGCGTCCCCTGGCCCTCTCCAGGGCAGGGGAAGGTT...GGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000547315.6
CDS-3UTR CCA 90 bp TGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGGGTCCTGGCTGCTTCCTCCTaGAGGTCACTCAAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: WPQVAPPGLSSPEAMPRVLAASS*RSLKGS
Trigger: AGAGCCTTTGAGTGACCTCCAGGAGGAAGCAGCCAG...GACCCTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CCA 90 bp GCCAGGGCAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCGGAGGGAAGCGCTaGCTGCTTCCTCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: ARAECDRQRVSERSQQLSLGGKR*LLPPGG
Trigger: ACCTCCAGGAGGAAGCAGCCAGCGCTTCCCTCCGAG...AGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTGCCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CCA 90 bp TGTCTCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGACGCCCTCACGGGGCATaGAGATGCTGGCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: CLPLALPRTHPPSPGQTRRPHGA*RCWLSH
Trigger: ATGGGAAAGCCAGCATCTCCATGCCCCGTGAGGGCG...TCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CCA 90 bp AGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGTCTCCCGTGGCTGGGGTTCTGTaGGTCCCTCGAGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: SATWTPTACHGIQKPLSPVAGVL*VPRGVQ
Trigger: TTGAACTCCTCGAGGGACCCACAGAACCCCAGCCAC...GGGAGACAGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CCA 90 bp CCAGGTGCCAGCAGCATTCACATGGGGCAGGGGGCCCATGAGTGCCACCTGGACAGGGCTTTGCAATGCTaGAGACAGAAGCTGCTGACA +
Preference number: 4 (lower is better)
Translates to: PGASSIHMGQGAHECHLDRALQC*RQKLLT
Trigger: TGTCAGCAGCTTCTGTCTCCAGCATTGCAAAGCCCT...GTCCAGGTGGCACTCATGGGCCCCCTGCCCCATGTGAATGCTGCTGGCACCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp CGACCTCCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGCTGGGGAGAGATCCCAGGAATaGGCCTGGGGTCTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: RPPVHNREGQRPVLEAAGERSQE*AWGLEN
Trigger: GTTTTCCAGACCCCAGGCCCATTCCTGGGATCTCTC...CCCAGCAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGGAGGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR CCA 90 bp CATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGTCCCCATGAGTGCCACCTaGACCCCGACAGCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: HECHLDPDSLSWHPETSVPMSAT*TPTACH
Trigger: ATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGG...GACAGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp CAGGGGGCCCATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAATCTGTACACCCTCATaGTGCCCTGACCACACAGCA +
Preference number: 4 (lower is better)
Translates to: QGAHECHLDPDSLSWHPEICTPS*CPDHTA
Trigger: TGCTGTGTGGTCAGGGCACCATGAGGGTGTACAGAT...TTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGGCCCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR CCA 90 bp TGGTGCGACCTCCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGTCCTTAGCAGATAACTaGGGGAAGCCACGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: WCDLLSTTVRDKGLSLRLSLADN*GKPRAH
Trigger: GTGGGCCCGTGGCTTCCCCCAGTTATCTGCTAAGGA...CAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGGAGGTCGCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR CCA 90 bp GTCTCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAGTCCTTAGCAGATAACTaGGGGAAGCCACGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: VSPWLCQGHILHLLVRPESLADN*GKPRAH
Trigger: GTGGGCCCGTGGCTTCCCCCAGTTATCTGCTAAGGA...CTCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR TCA 90 bp CAGGGGGCCCATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAGAGTTCAAGGGACTGTaGGAATTGTCCAGACTTGGC +
Preference number: 4 (lower is better)
Translates to: QGAHECHLDPDSLSWHPEEFKGL*ELSRLG
Trigger: GCCAAGTCTGGACAATTCTCACAGTCCCTTGAACTC...TTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGGCCCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR TCA 90 bp CAGGGGGCCCATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAGTGGTGTGTATGCTCTaGAGGGCTCTCCAGAGTTTT +
Preference number: 4 (lower is better)
Translates to: QGAHECHLDPDSLSWHPEVVCML*RALQSF
Trigger: AAAACTCTGGAGAGCCCTTCAGAGCATACACACCAC...TTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGGCCCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR TCA 90 bp CTCTGTCTCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCTCGCTCCAGAGGCGCTaGGAAGTAGACGTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: LCLPLALPRTHPPSPGQTSLQRR*EVDVVC
Trigger: ACACACCACGTCTACTTCTCAGCGCCTCTGGAGCGA...GGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR TCA 90 bp GTGCGACCTCCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGCTCAGACAGAGGGTTTCTaGGCGGTCTCAACAGCTGTC +
Preference number: 4 (lower is better)
Translates to: VRPPVHNREGQRPVLEAAQTEGF*AVSTAV
Trigger: GACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTG...AGCAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGGAGGTCGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR TCA 90 bp GACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCTGGTGACGTTTCAGTGACAAAGGCCTGTCCTTaGGGCTGCTGGGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: DRGFLSGLNSCLSGDVSVTKACP*GCWAGA
Trigger: GGCCCCTGCCCAGCAGCCTCAAGGACAGGCCTTTGT...CACTGAAACGTCACCAGAGAGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR TCA 90 bp CCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGAATAGCCGGGCGTGGTaGTGGGCGCCTGTCATCCCA +
Preference number: 4 (lower is better)
Translates to: PGVWKTAPQTALVSTSTQNSRAW*WAPVIP
Trigger: TGGGATGACAGGCGCCCATCACCACGCCCGGCTATT...CTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR TCA 90 bp TGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCCTTCTGAGGAGATCATaGGGCACGGCCCGAGGCACG +
Preference number: 4 (lower is better)
Translates to: WGLENSSTDSSGFHINPALLRRS*GTARGT
Trigger: CGTGCCTCGGGCCGTGCCTCATGATCTCCTCAGAAG...GGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR GCA 90 bp GTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAGGCCCGATGGGCAGCTaGTCAGGAGACATGCACGCC +
Preference number: 4 (lower is better)
Translates to: VWKTAPQTALVSTSTQPGGPMGS*SGDMHA
Trigger: GGCGTGCATGTCTCCTGAGCAGCTGCCCATCGGGCC...TCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR GCA 90 bp GATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGCACGGGGCATGGAGATaGTGGCTTTCCCATCGGACA +
Preference number: 4 (lower is better)
Translates to: DLATSCSPWTKQPRSHAQHGAWR*WLSHRT
Trigger: TGTCCGATGGGAAAGCCAGCATCTCCATGCCCCGTG...CTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR GCA 90 bp CCAGGTGCCAGCAGCATTCACATGGGGCAGGGGGCCCATGAGTGCCACCTGGACATGGTTGGTGAGAACTaGACTCTTTTGGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PGASSIHMGQGAHECHLDMVGEN*TLLGQK
Trigger: CTTCTGCCCCAAAAGAGTGCAGTTCTCACCAACCAT...GTCCAGGTGGCACTCATGGGCCCCCTGCCCCATGTGAATGCTGCTGGCACCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR GCA 90 bp GGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAAGAAGCCTCCCCTGTTTGCTaGCAGGCGGCCCCGAGAGCT +
Preference number: 4 (lower is better)
Translates to: GKQLHRQLWFPHQPSQEEASPVC*QAAPRA
Trigger: AGCTCTCGGGGCCGCCTGGCAGCAAACAGGGGAGGC...TTCTTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR GCA 90 bp GCCCATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTTCTTCAGGAAGCGGCTaGATGTCATCAGCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: AHECHLDPDSLSWHPETSSSGSG*MSSASP
Trigger: AGGGGAGGCTGATGACATGCAGCCGCTTCCTGAAGA...AGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR GCA 90 bp CTCCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGCTGGGCAGGCTTGGAATAGTGATGTaGTGGCCACCTCCGCATGAG +
Preference number: 4 (lower is better)
Translates to: LLSTTVRDKGLSLRLLGRLGIVM*WPPPHE
Trigger: CTCATGCGGAGGTGGCCAGCACATCACTATTCCAAG...CCTGCCCAGCAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR GCA 90 bp GTGCGACCTCCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGCTGTCTCCCCTTGGCTCTaGCAAGGACACATCCTCCAT +
Preference number: 4 (lower is better)
Translates to: VRPPVHNREGQRPVLEAAVSPWL*QGHILH
Trigger: ATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGAC...AGCAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGGAGGTCGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR GCA 90 bp CTCTGTCTCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCTGTACACCCTCATGGTaGCCTGACCACACAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LCLPLALPRTHPPSPGQTCTPSW*PDHTAA
Trigger: GGCTGCTGTGTGGTCAGGGCACCATGAGGGTGTACA...GGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR GCA 90 bp GTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGACCAAGGTGGGGCTCCTaGTCTGGAGAGAGCCGCGAG +
Preference number: 4 (lower is better)
Translates to: VWKTAPQTALVSTSTQPGPRWGS*SGESRE
Trigger: CTCGCGGCTCTCTCCAGAGCAGGAGCCCCACCTTGG...TCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS-3UTR GCA 90 bp TGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAAGAAGGAGTGCCCCGGGCTaGCCAGTGGCTGACGGTGGA +
Preference number: 4 (lower is better)
Translates to: WKTAPQTALVSTSTQPGRRSAPG*PVADGG
Trigger: TCCACCGTCAGCCACTGGGCAGCCCGGGGCACTCCT...TCTTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS-3UTR GCA 90 bp GGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGTACCCTGGGGCAGGTaGTGGTTGGACCCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: GVWKTAPQTALVSTSTQPVPWGR*WLDPSR
Trigger: TCTGCTGGGGTCCAACCAGCACCTGCCCCAGGGTAC...TGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR CCA 90 bp GACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCTGGTGACGTTTCAGTGGCCGGCCTTGCATCTTaGAGCCCCCAGGCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: DRGFLSGLNSCLSGDVSVAGLAS*SPQASR
Trigger: TCTGCTGGCCTGGGGGCTCCAAGATGCAAGGCCGGC...CACTGAAACGTCACCAGAGAGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CCA 90 bp GAGGCGCTGAGAAGTAGACGTGGTGTGTATGCTCTGAAGGGCTCTCCAGAGTTTATCGGGCAGTGCAGGTaGAACCGCCCTCACGGGGCA +
Preference number: 4 (lower is better)
Translates to: EALRSRRGVYALKGSPEFIGQCR*NRPHGA
Trigger: TGCCCCGTGAGGGCGGTTCCACCTGCACTGCCCGAT...AAACTCTGGAGAGCCCTTCAGAGCATACACACCACGTCTACTTCTCAGCGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR CCA 90 bp TGGTGCGACCTCCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGAGGTCCACCCTGGCATaGTTGGTGAGAACTGCACTC +
Preference number: 4 (lower is better)
Translates to: WCDLLSTTVRDKGLSLRLRSTLA*LVRTAL
Trigger: GAGTGCAGTTCTCACCAACCATGCCAGGGTGGACCT...CAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGGAGGTCGCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000547315.6
CDS-3UTR CCA 90 bp GACCTCCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGCTGGGCAGAAAGAAGTTCTCCTaGCAACGGGACTCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: DLLSTTVRDKGLSLRLLGRKKFS*QRDSLQ
Trigger: CTGGAGCGAGTCCCGTTGCCAGGAGAACTTCTTTCT...GCCCAGCAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGGAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR CCA 90 bp CTGTCTCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGCCCGAGAGCTTGGTCTaGATCAGGGCTTTGCAATGC +
Preference number: 4 (lower is better)
Translates to: LSPLGSAKDTSSISWSDPPESLV*IRALQC
Trigger: GCATTGCAAAGCCCTGATCCAGACCAAGCTCTCGGG...CGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp CCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGGCGGCCCCGAGAGCTTaGTCTGGATCAGGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: PGVWKTAPQTALVSTSTQAAPRA*SGSGLC
Trigger: GCAAAGCCCTGATCCAGACCAAGCTCTCGGGGCCGC...CTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CCA 90 bp TTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGGGTCAGGACAGGTCCTGTTaGAGAGATCCCAGGAATGGG +
Preference number: 4 (lower is better)
Translates to: LATSCSPWTKQPRSHAQGQDRSC*RDPRNG
Trigger: CCCATTCCTGGGATCTCTCCAACAGGACCTGTCCTG...ACCCTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp TTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGGGTACATCCTCCATCTCCTaGTCAGACCCGAGACAAGCC +
Preference number: 4 (lower is better)
Translates to: LATSCSPWTKQPRSHAQGTSSIS*SDPRQA
Trigger: GGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGT...ACCCTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp AGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGTCTCCCACCTCTGTCTCCCCTTaGCTCTGCCAAGGACACATC +
Preference number: 4 (lower is better)
Translates to: SATWTPTACHGIQKPLSPTSVSP*LCQGHI
Trigger: GATGTGTCCTTGGCAGAGCCAAGGGGAGACAGAGGT...GGGAGACAGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp CCCATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGCCCGACAGCCTGTCATaGCATCCAGAAACCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PMSATWTPTACHGIQKPLPDSLS*HPETSV
Trigger: GACAGAGGTTTCTGGATGCCATGACAGGCTGTCGGG...CAGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp CTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCAGAACACCCATGAGTGCCACCTaGACCCCGACAGCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: LPRTHPPSPGQTRDKPRTPMSAT*TPTACH
Trigger: ATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGG...TGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp AGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGTCTCCCTCAGGGCTGACTTCTTaGCTCTGCCCTTCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: SATWTPTACHGIQKPLSPSGLTS*LCPSKS
Trigger: GCTCTTCGAAGGGCAGAGCCAAGAAGTCAGCCCTGA...GGGAGACAGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR CCA 90 bp GAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAAGAAACAGCCCTGGAACGCCTaGGCCTGGACAGGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: ENSSTDSSGFHINPARKKQPWNA*AWTGPE
Trigger: CTCGGGCCCTGTCCAGGCCCAGGCGTTCCAGGGCTG...TTTCTTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS-3UTR CCA 90 bp CCTTTTCCTCTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCCCCCGGGCTGCCCAGTaGCTGACGGTGGAAAGTGCC +
Preference number: 4 (lower is better)
Translates to: PFPLNSWIWPQVAPPGLSPRAAQ*LTVESA
Trigger: GGCACTTTCCACCGTCAGCCACTGGGCAGCCCGGGG...GCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAGAGGAAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS-3UTR CCA 90 bp CACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCAGAACACAGGACAGGTCCATCTGGGCAATGCTaGTTGCGGCCTTCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: HILHLLVRPETSPEHRTGPSGQC*LRPSGL
Trigger: GAGCCCAGAAGGCCGCAACCAGCATTGCCCAGATGG...ACCTGTCCTGTGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR TCA 90 bp GACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCAGAACACAGGACAGCAGCTGTCTCTCTGGTaGCGTTTCAGTGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: DTSSISWSDPRQAQNTGQQLSLW*RFSAFP
Trigger: GGGGAAGGCACTGAAACGTCACCAGAGAGACAGCTG...CTGTCCTGTGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR TCA 90 bp TCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAGACACAGACAGAGGGTTTCTaGGCGGTCTCAACAGCTGTC +
Preference number: 4 (lower is better)
Translates to: SPWLCQGHILHLLVRPETQTEGF*AVSTAV
Trigger: GACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTG...TGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR TCA 90 bp CTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCAGAACAGCACCTGCGAGGCTCTaGGGACACAGCACATCTGTA +
Preference number: 4 (lower is better)
Translates to: LPRTHPPSPGQTRDKPRTAPARL*GHSTSV
Trigger: TACAGATGTGCTGTGTCCTCAGAGCCTCGCAGGTGC...TGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR TCA 90 bp TGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAAGAGGCCCAGGCAGTAAGTaGGGGCACCTGCGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: WKTAPQTALVSTSTQPGRGPGSK*GHLRGS
Trigger: AGAGCCTCGCAGGTGCCCTCACTTACTGCCTGGGCC...TCTTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR TCA 90 bp GAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAAGAAAGGGCTGCCCAGTGGCTaGCGGTGGAAAGTGCCCACG +
Preference number: 4 (lower is better)
Translates to: ENSSTDSSGFHINPARKKGLPSG*RWKVPT
Trigger: CGTGGGCACTTTCCACCGTCAGCCACTGGGCAGCCC...TTTCTTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS-3UTR GCA 90 bp CTGACAGTGAGGAGTCCTTCAGGCTCTTTGAGGTCACAATCTTCCATGATGTGGAGCTCCCGCCGGCCTTaGATCTTGGAGCCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LTVRSPSGSLRSQSSMMWSSRRP*ILEPPG
Trigger: GCCTGGGGGCTCCAAGATGCAAGGCCGGCGGGAGCT...CCACATCATGGAAGATTGTGACCTCAAAGAGCCTGAAGGACTCCTCACTGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR GCA 90 bp GGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAAGAATCAGCCTCCCCTGTTTaGTGCCAGGCGGCCCCGAGA +
Preference number: 4 (lower is better)
Translates to: GKQLHRQLWFPHQPSQEESASPV*CQAAPR
Trigger: TCTCGGGGCCGCCTGGCAGCAAACAGGGGAGGCTGA...TTCTTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR GCA 90 bp TTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGGGTCTTGGAATAGTGATGTaGTGGCCACCTCCGCATGAG +
Preference number: 4 (lower is better)
Translates to: LATSCSPWTKQPRSHAQGLGIVM*WPPPHE
Trigger: CTCATGCGGAGGTGGCCAGCACATCACTATTCCAAG...ACCCTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR GCA 90 bp GATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGGTCCGCGAGTTGTGCTaGTGGGGACAGAGATGTCAA +
Preference number: 4 (lower is better)
Translates to: DLATSCSPWTKQPRSHAQVRELC*WGQRCQ
Trigger: TTGACATCTCTGTCCCCAGCAGCACAACTCGCGGAC...CTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR GCA 90 bp AGGACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCAGAACACAGGACGGAAGGGAAAATGAGTaGAAGGGCAGGTGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: RTHPPSPGQTRDKPRTQDGRENE*KGRCGS
Trigger: GCTGCCGCACCTGCCCTTGCACTCATTTTCCCTTCC...GTCCTGTGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR CCA 90 bp CTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAACCAGCAGAGGCCCGATaGGCAGCTGCTCAGGAGACA +
Preference number: 4 (lower is better)
Translates to: LNSWIWPQVAPPGLSSPEPAEAR*AAAQET
Trigger: TGTCTCCTGAGCAGCTGCCCATCGGGCCTCTGCTGG...TTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CCA 90 bp GCCAGGGCAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTGGGGCATGGAGATGCTaGCTTTCCCATCGGACAGGA +
Preference number: 4 (lower is better)
Translates to: ARAECDRQRVSERSQQLSGAWRC*LSHRTG
Trigger: TCCTGTCCGATGGGAAAGCCAGCATCTCCATGCCCC...AGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTGCCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CCA 90 bp TTCAGGCTCTTTGAGGTCACAATCTTCCATGATGTGGCCCTGGCCTCCAGAAAGATCGGGCAGTGCAGGTaGAACCGCCCTCACGGGGCA +
Preference number: 4 (lower is better)
Translates to: FRLFEVTIFHDVALASRKIGQCR*NRPHGA
Trigger: TGCCCCGTGAGGGCGGTTCCACCTGCACTGCCCGAT...CTTTCTGGAGGCCAGGGCCACATCATGGAAGATTGTGACCTCAAAGAGCCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR CCA 90 bp AGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCTGGTGACGTTTCAGTGCCTGTGGTTCTCGGTGGCTaGGGTTCTGTGGGTCCCTCG +
Preference number: 4 (lower is better)
Translates to: RGFLSGLNSCLSGDVSVPVVLGG*GSVGPS
Trigger: CGAGGGACCCACAGAACCCCAGCCACCGAGAACCAC...AGGCACTGAAACGTCACCAGAGAGACAGCTGTTGAGACCGCTCAGAAACCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CCA 90 bp CACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCAGAACACAGGACAGGTAGAAGTGGTTCTCGGTaGCTGGGGTTCTGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: HILHLLVRPETSPEHRTGRSGSR*LGFCGS
Trigger: GGACCCACAGAACCCCAGCCACCGAGAACCACTTCT...ACCTGTCCTGTGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CCA 90 bp CCCATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGAGAAAGAAGTTCTCCTaGCAACGGGACTCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PMSATWTPTACHGIQKPLRKKFS*QRDSLQ
Trigger: CTGGAGCGAGTCCCGTTGCCAGGAGAACTTCTTTCT...CAGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp CCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCGAGAGCTTGGTCTaGATCAGGGCTTTGCAATGC +
Preference number: 4 (lower is better)
Translates to: PLALPRTHPPSPGQTRDKPESLV*IRALQC
Trigger: GCATTGCAAAGCCCTGATCCAGACCAAGCTCTCGGG...CTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp CTCTGTCTCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCCCGAGAGCTTGGTCTaGATCAGGGCTTTGCAATGC +
Preference number: 4 (lower is better)
Translates to: LCLPLALPRTHPPSPGQTPESLV*IRALQC
Trigger: GCATTGCAAAGCCCTGATCCAGACCAAGCTCTCGGG...GGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGACAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp TCCTTCAGGCTCTTTGAGGTCACAATCTTCCATGATGTGGCCCTGGCCTCCAGAGCGGCCCCGAGAGCTTaGTCTGGATCAGGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: SFRLFEVTIFHDVALASRAAPRA*SGSGLC
Trigger: GCAAAGCCCTGATCCAGACCAAGCTCTCGGGGCCGC...TCTGGAGGCCAGGGCCACATCATGGAAGATTGTGACCTCAAAGAGCCTGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR CCA 90 bp CTCCTGGCAACGGGACTCGCTCCAGAGGCGCTGAGAAGTAGACGTGGTGTGTATGAGAGATCCCAGGAATaGGCCTGGGGTCTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: LLATGLAPEALRSRRGVYERSQE*AWGLEN
Trigger: GTTTTCCAGACCCCAGGCCCATTCCTGGGATCTCTC...ATACACACCACGTCTACTTCTCAGCGCCTCTGGAGCGAGTCCCGTTGCCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR CCA 90 bp TGTCTCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAGAGAGATCCCAGGAATaGGCCTGGGGTCTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: CLPLALPRTHPPSPGQTRERSQE*AWGLEN
Trigger: GTTTTCCAGACCCCAGGCCCATTCCTGGGATCTCTC...TCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp TGTCTCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAACATCCTCCATCTCCTaGTCAGACCCGAGACAAGCC +
Preference number: 4 (lower is better)
Translates to: CLPLALPRTHPPSPGQTRTSSIS*SDPRQA
Trigger: GGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGT...TCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp CTCTGTCTCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCCCGACAGCCTGTCATaGCATCCAGAAACCTCTGTC +
Preference number: 4 (lower is better)
Translates to: LCLPLALPRTHPPSPGQTPDSLS*HPETSV
Trigger: GACAGAGGTTTCTGGATGCCATGACAGGCTGTCGGG...GGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGACAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp TGTCTCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGACCCGACAGCCTGTCATaGCATCCAGAAACCTCTGTC +
Preference number: 4 (lower is better)
Translates to: CLPLALPRTHPPSPGQTRPDSLS*HPETSV
Trigger: GACAGAGGTTTCTGGATGCCATGACAGGCTGTCGGG...TCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp GATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGCCCGACAGCCTGTCATaGCATCCAGAAACCTCTGTC +
Preference number: 4 (lower is better)
Translates to: DLATSCSPWTKQPRSHAQPDSLS*HPETSV
Trigger: GACAGAGGTTTCTGGATGCCATGACAGGCTGTCGGG...CTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp GCAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCTGGCCCATGAGTGCCACCTaGACCCCGACAGCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: AECDRQRVSERSQQLSLWPMSAT*TPTACH
Trigger: ATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGG...CCAGAGAGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR CCA 90 bp GAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCCAGCAGCATTCACATaGGGCAGGGGGCCCATGAGT +
Preference number: 4 (lower is better)
Translates to: ELMDLATSCSPWTKQPRSPAAFT*GRGPMS
Trigger: ACTCATGGGCCCCCTGCCCCATGTGAATGCTGCTGG...GCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp TCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAGACAACAAGTTGCTCCCCCTaGACTAAGCAGCCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: SPWLCQGHILHLLVRPETTSCSP*TKQPRS
Trigger: GCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGT...TGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp GATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGACAAGTTGCTCCCCCTaGACTAAGCAGCCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: DLATSCSPWTKQPRSHAQTSCSP*TKQPRS
Trigger: GCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGT...CTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp CAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCTGGTGCTCTCGCAGGCCAGTaGTGCGACCTCCTGTCCACA +
Preference number: 4 (lower is better)
Translates to: QSVTDRGFLSGLNSCLSGALAGQ*CDLLST
Trigger: TGTGGACAGGAGGTCGCACCACTGGCCTGCGAGAGC...ACCAGAGAGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR CCA 90 bp GATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGGTCTCCTCCAAGGAGTaGAAGCTCCGTGAGACCAGA +
Preference number: 4 (lower is better)
Translates to: DLATSCSPWTKQPRSHAQVSSKE*KLRETR
Trigger: TCTGGTCTCACGGAGCTTCCACTCCTTGGAGGAGAC...CTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR CCA 90 bp AGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGTCTCCCTGTGTCCCTGGAAAATaGCCATCTGCGAGTGACTGC +
Preference number: 4 (lower is better)
Translates to: SATWTPTACHGIQKPLSPCVPGK*PSASDC
Trigger: GCAGTCACTCGCAGATGGCCATTTTCCAGGGACACA...GGGAGACAGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550614.5
CDS-3UTR TCA 90 bp TGGGCCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACTCGCTCCAGAGGCGCTaGGAAGTAGACGTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: WAWGLENSSTDSSGFHINSLQRR*EVDVVC
Trigger: ACACACCACGTCTACTTCTCAGCGCCTCTGGAGCGA...GTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR TCA 90 bp GGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGCACCTGCGAGGCTCTaGGGACACAGCACATCTGTA +
Preference number: 4 (lower is better)
Translates to: GVWKTAPQTALVSTSTQPAPARL*GHSTSV
Trigger: TACAGATGTGCTGTGTCCTCAGAGCCTCGCAGGTGC...TGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR TCA 90 bp GAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCGCACCTGCGAGGCTCTaGGGACACAGCACATCTGTA +
Preference number: 4 (lower is better)
Translates to: ELMDLATSCSPWTKQPRSAPARL*GHSTSV
Trigger: TACAGATGTGCTGTGTCCTCAGAGCCTCGCAGGTGC...GCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR TCA 90 bp CTGTCTCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGTACAAAAGTCAGGGCTaGCTTCTTGGCTCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: LSPLGSAKDTSSISWSDPYKSQG*LLGSAL
Trigger: AAGGGCAGAGCCAAGAAGTCAGCCCTGACTTTTGTA...CGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR TCA 90 bp TCTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGACGCACTGTGAGGGACTaGGAAGGTCTGCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SELMDLATSCSPWTKQPRRTVRD*EGLPAG
Trigger: TCCTGCAGGCAGACCTTCTCAGTCCCTCACAGTGCG...TCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR TCA 90 bp CCCACCAGAGGCTCTCGCAGGCCAGTGGTGCGACCTCCTGTCCACAACCGTGAGCTTTCAATGCTCAGTTaGAAGTGTGTCCCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: PTRGSRRPVVRPPVHNRELSMLS*KCVPGK
Trigger: TTTTCCAGGGACACACTTTCAACTGAGCATTGAAAG...CTCACGGTTGTGGACAGGAGGTCGCACCACTGGCCTGCGAGAGCCTCTGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550614.5
CDS-3UTR GCA 90 bp GACCTCCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGCTGGGCGGAAACGTCTTCAGCTaGCTGCTGGACTGTTATTTC +
Preference number: 4 (lower is better)
Translates to: DLLSTTVRDKGLSLRLLGGNVFS*LLDCYF
Trigger: GAAATAACAGTCCAGCAGGCAGCTGAAGACGTTTCC...GCCCAGCAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGGAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR GCA 90 bp GTTCTCCTGGCAACGGGACTCGCTCCAGAGGCGCTGAGAAGTAGACGTGGTGTGATCAGGGCTTTGCAATaGTGGAGACAGAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VLLATGLAPEALRSRRGVIRALQ*WRQKLL
Trigger: CAGCAGCTTCTGTCTCCAGCATTGCAAAGCCCTGAT...CACACCACGTCTACTTCTCAGCGCCTCTGGAGCGAGTCCCGTTGCCAGGAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR GCA 90 bp AGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGTCTCCCATCAGGGCTTTGCAATaGTGGAGACAGAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SATWTPTACHGIQKPLSPIRALQ*WRQKLL
Trigger: CAGCAGCTTCTGTCTCCAGCATTGCAAAGCCCTGAT...GGGAGACAGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR GCA 90 bp AGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGTCTCCCTCTGGATCAGGGCTTTaGAATGCTGGAGACAGAAGC +
Preference number: 4 (lower is better)
Translates to: SATWTPTACHGIQKPLSPSGSGL*NAGDRS
Trigger: GCTTCTGTCTCCAGCATTGCAAAGCCCTGATCCAGA...GGGAGACAGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR GCA 90 bp CTCTGTCTCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCTTGGAATAGTGATGTaGTGGCCACCTCCGCATGAG +
Preference number: 4 (lower is better)
Translates to: LCLPLALPRTHPPSPGQTLGIVM*WPPPHE
Trigger: CTCATGCGGAGGTGGCCAGCACATCACTATTCCAAG...GGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR GCA 90 bp TGTCTCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAGATTTGGCCACAAGTTaGTCCCCCTGGACTAAGCAG +
Preference number: 4 (lower is better)
Translates to: CLPLALPRTHPPSPGQTRDLATS*SPWTKQ
Trigger: CTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATC...TCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR GCA 90 bp TGGGCCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACAGGGCGAGAGAAACCTaGAACCAGCCGTTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: WAWGLENSSTDSSGFHINRARET*NQPFPP
Trigger: AGGAGGGAACGGCTGGTTGCAGGTTTCTCTCGCCCT...GTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547315.6
ENST00000551606.5
CDS-3UTR GCA 90 bp TTTTCCTCTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCGGAGATCGCGCCACTaGACTCCAGCCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: FSSELMDLATSCSPWTKQRRSRH*TPAWGT
Trigger: TGTCCCCCAGGCTGGAGTGCAGTGGCGCGATCTCCG...CTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAGAGGAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR CCA 90 bp CCTTTTCCTCTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCCCAGCAGAGGCCCGATaGGCAGCTGCTCAGGAGACA +
Preference number: 4 (lower is better)
Translates to: PFPLNSWIWPQVAPPGLSPAEAR*AAAQET
Trigger: TGTCTCCTGAGCAGCTGCCCATCGGGCCTCTGCTGG...GCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAGAGGAAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CCA 90 bp TCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAACTCGGAGGGAAGCGCTaGCTGCTTCCTCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: SGKQLHRQLWFPHQPSQELGGKR*LLPPGG
Trigger: ACCTCCAGGAGGAAGCAGCCAGCGCTTCCCTCCGAG...TTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CCA 90 bp TTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGGGTAGAACTGCACTCTTTTaGGGCAGAAGTGGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: LATSCSPWTKQPRSHAQGRTALF*GRSGSR
Trigger: CCGAGAACCACTTCTGCCCCAAAAGAGTGCAGTTCT...ACCCTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CCA 90 bp CTCTGTCTCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCAGAAAGAAGTTCTCCTaGCAACGGGACTCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LCLPLALPRTHPPSPGQTRKKFS*QRDSLQ
Trigger: CTGGAGCGAGTCCCGTTGCCAGGAGAACTTCTTTCT...GGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp GATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGTCCATGATGTGGCCCTaGCCTCCAGAAAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: DLATSCSPWTKQPRSHAQSMMWP*PPERFF
Trigger: GAAGAACCTTTCTGGAGGCCAGGGCCACATCATGGA...CTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp GGCCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCCCCGAGAGCTTGGTCTaGATCAGGGCTTTGCAATGC +
Preference number: 4 (lower is better)
Translates to: GLGSGKQLHRQLWFPHQPPESLV*IRALQC
Trigger: GCATTGCAAAGCCCTGATCCAGACCAAGCTCTCGGG...GGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGGCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CCA 90 bp TGGGCCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACGGAATAGTGATGTGCTaGCCACCTCCGCATGAGGGG +
Preference number: 4 (lower is better)
Translates to: WAWGLENSSTDSSGFHINGIVMC*PPPHEG
Trigger: CCCCTCATGCGGAGGTGGCCAGCACATCACTATTCC...GTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CCA 90 bp GCCAGGGCAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCAGGACAGGTCCTGTTaGAGAGATCCCAGGAATGGG +
Preference number: 4 (lower is better)
Translates to: ARAECDRQRVSERSQQLSQDRSC*RDPRNG
Trigger: CCCATTCCTGGGATCTCTCCAACAGGACCTGTCCTG...AGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTGCCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR CCA 90 bp GCCAGGGCAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTACATCCTCCATCTCCTaGTCAGACCCGAGACAAGCC +
Preference number: 4 (lower is better)
Translates to: ARAECDRQRVSERSQQLSTSSIS*SDPRQA
Trigger: GGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGT...AGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTGCCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR CCA 90 bp AGGACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCAGAACACAGGACACCTCTGTCTCCCCTTaGCTCTGCCAAGGACACATC +
Preference number: 4 (lower is better)
Translates to: RTHPPSPGQTRDKPRTQDTSVSP*LCQGHI
Trigger: GATGTGTCCTTGGCAGAGCCAAGGGGAGACAGAGGT...GTCCTGTGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp CTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAACCCATGAGTGCCACCTaGACCCCGACAGCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: LNSWIWPQVAPPGLSSPEPMSAT*TPTACH
Trigger: ATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGG...TTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp TCCTTCAGGCTCTTTGAGGTCACAATCTTCCATGATGTGGCCCTGGCCTCCAGACCAGCAGCATTCACATaGGGCAGGGGGCCCATGAGT +
Preference number: 4 (lower is better)
Translates to: SFRLFEVTIFHDVALASRPAAFT*GRGPMS
Trigger: ACTCATGGGCCCCCTGCCCCATGTGAATGCTGCTGG...TCTGGAGGCCAGGGCCACATCATGGAAGATTGTGACCTCAAAGAGCCTGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR CCA 90 bp TCTGCCCTTCGAAGAGCACAGTTTTCCTTAGCAGATAACTGGGGGAAGCCACGGCCAGCAGCATTCACATaGGGCAGGGGGCCCATGAGT +
Preference number: 4 (lower is better)
Translates to: SALRRAQFSLADNWGKPRPAAFT*GRGPMS
Trigger: ACTCATGGGCCCCCTGCCCCATGTGAATGCTGCTGG...CCGTGGCTTCCCCCAGTTATCTGCTAAGGAAAACTGTGCTCTTCGAAGGGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR CCA 90 bp CTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCAGAACAACAAGTTGCTCCCCCTaGACTAAGCAGCCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LPRTHPPSPGQTRDKPRTTSCSP*TKQPRS
Trigger: GCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGT...TGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp CAGGTGCCAGCAGCATTCACATGGGGCAGGGGGCCCATGAGTGCCACCTGGACCTTTCCTCTGAACTCATaGATTTGGCCACAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: QVPAAFTWGRGPMSATWTFPLNS*IWPQVA
Trigger: AGCAACTTGTGGCCAAATCCATGAGTTCAGAGGAAA...GGTCCAGGTGGCACTCATGGGCCCCCTGCCCCATGTGAATGCTGCTGGCACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp CTCTGTCTCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCATCTGTACACCCTCATaGTGCCCTGACCACACAGCA +
Preference number: 4 (lower is better)
Translates to: LCLPLALPRTHPPSPGQTICTPS*CPDHTA
Trigger: TGCTGTGTGGTCAGGGCACCATGAGGGTGTACAGAT...GGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR CCA 90 bp CCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGATCTGTACACCCTCATaGTGCCCTGACCACACAGCA +
Preference number: 4 (lower is better)
Translates to: PLALPRTHPPSPGQTRDKICTPS*CPDHTA
Trigger: TGCTGTGTGGTCAGGGCACCATGAGGGTGTACAGAT...CTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR CCA 90 bp TTCAGGCTCTTTGAGGTCACAATCTTCCATGATGTGGCCCTGGCCTCCAGAAAGGCTCTCGCAGGCCAGTaGTGCGACCTCCTGTCCACA +
Preference number: 4 (lower is better)
Translates to: FRLFEVTIFHDVALASRKALAGQ*CDLLST
Trigger: TGTGGACAGGAGGTCGCACCACTGGCCTGCGAGAGC...CTTTCTGGAGGCCAGGGCCACATCATGGAAGATTGTGACCTCAAAGAGCCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389964.7
CDS-3UTR CCA 90 bp CACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCAGAACACAGGACAGGTTCAGGGCTGACTTCTTaGCTCTGCCCTTCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: HILHLLVRPETSPEHRTGSGLTS*LCPSKS
Trigger: GCTCTTCGAAGGGCAGAGCCAAGAAGTCAGCCCTGA...ACCTGTCCTGTGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR CCA 90 bp TTTTCCTCTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGACGGTGGGCCAGGGCTaGAGCCCAGAATGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: FSSELMDLATSCSPWTKQTVGQG*SPEWPV
Trigger: GACAGGCCATTCTGGGCTCCAGCCCTGGCCCACCGT...CTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAGAGGAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR CCA 90 bp GAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAAGAAAGGCACACGGGCCATCTaGGCAATGCTGGTTGCGGCC +
Preference number: 4 (lower is better)
Translates to: ENSSTDSSGFHINPARKKGTRAI*AMLVAA
Trigger: GGCCGCAACCAGCATTGCCCAGATGGCCCGTGTGCC...TTTCTTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR CCA 90 bp CCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGCTGGGCAGGGGTTTTCTAGAACTCTGTaGCTGAGAACCATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PVHNREGQRPVLEAAGQGFSRTL*LRTMRQ
Trigger: CTGCCTCATGGTTCTCAGCCACAGAGTTCTAGAAAA...CCCCTGCCCAGCAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550614.5
CDS-3UTR TCA 90 bp CTCTGTCTCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCGTGGTGTGTATGCTCTaGAGGGCTCTCCAGAGTTTT +
Preference number: 4 (lower is better)
Translates to: LCLPLALPRTHPPSPGQTVVCML*RALQSF
Trigger: AAAACTCTGGAGAGCCCTTCAGAGCATACACACCAC...GGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR TCA 90 bp TCTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGATCGCTCCAGAGGCGCTaGGAAGTAGACGTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: SELMDLATSCSPWTKQPRSLQRR*EVDVVC
Trigger: ACACACCACGTCTACTTCTCAGCGCCTCTGGAGCGA...TCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR TCA 90 bp GTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGATCGCTCCAGAGGCGCTaGGAAGTAGACGTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: VWKTAPQTALVSTSTQPGSLQRR*EVDVVC
Trigger: ACACACCACGTCTACTTCTCAGCGCCTCTGGAGCGA...TCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR TCA 90 bp AGTCCTTCAGGCTCTTTGAGGTCACAATCTTCCATGATGTGGCCCTGGCCTCCACAGCTGTCTCTCTGGTaGCGTTTCAGTGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SPSGSLRSQSSMMWPWPPQLSLW*RFSAFP
Trigger: GGGGAAGGCACTGAAACGTCACCAGAGAGACAGCTG...TGGAGGCCAGGGCCACATCATGGAAGATTGTGACCTCAAAGAGCCTGAAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR TCA 90 bp TCTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGACAGCTGTCTCTCTGGTaGCGTTTCAGTGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SELMDLATSCSPWTKQPRQLSLW*RFSAFP
Trigger: GGGGAAGGCACTGAAACGTCACCAGAGAGACAGCTG...TCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR TCA 90 bp CCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCAGACAGAGGGTTTCTaGGCGGTCTCAACAGCTGTC +
Preference number: 4 (lower is better)
Translates to: PGVWKTAPQTALVSTSTQQTEGF*AVSTAV
Trigger: GACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTG...CTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR TCA 90 bp CCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGTACAAAAGTCAGGGCTaGCTTCTTGGCTCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: PLALPRTHPPSPGQTRDKYKSQG*LLGSAL
Trigger: AAGGGCAGAGCCAAGAAGTCAGCCCTGACTTTTGTA...CTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR TCA 90 bp CTGAGCGGTCTCAACAGCTGTCTCTCTGGTGACGTTTCAGTGCCTTCCCCTTTTCTCATAGGACCCCTATaGCCCACAGATGGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LSGLNSCLSGDVSVPSPFLIGPL*PTDGRD
Trigger: GTCCCTGCCATCTGTGGGTCATAGGGGTCCTATGAG...AAAAGGGGAAGGCACTGAAACGTCACCAGAGAGACAGCTGTTGAGACCGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550614.5
CDS-3UTR GCA 90 bp GCCCATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGGAAACGTCTTCAGCTaGCTGCTGGACTGTTATTTC +
Preference number: 4 (lower is better)
Translates to: AHECHLDPDSLSWHPETSGNVFS*LLDCYF
Trigger: GAAATAACAGTCCAGCAGGCAGCTGAAGACGTTTCC...AGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR GCA 90 bp CCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGATCAGGGCTTTGCAATaGTGGAGACAGAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PLALPRTHPPSPGQTRDKIRALQ*WRQKLL
Trigger: CAGCAGCTTCTGTCTCCAGCATTGCAAAGCCCTGAT...CTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR GCA 90 bp TGTCTCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAATCAGGGCTTTGCAATaGTGGAGACAGAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CLPLALPRTHPPSPGQTRIRALQ*WRQKLL
Trigger: CAGCAGCTTCTGTCTCCAGCATTGCAAAGCCCTGAT...TCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR GCA 90 bp TGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCTCTTCAGGAAGCGGCTaGATGTCATCAGCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: WGLENSSTDSSGFHINPASSGSG*MSSASP
Trigger: AGGGGAGGCTGATGACATGCAGCCGCTTCCTGAAGA...GGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR GCA 90 bp TGGGCCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACTCTTCAGGAAGCGGCTaGATGTCATCAGCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: WAWGLENSSTDSSGFHINSSGSG*MSSASP
Trigger: AGGGGAGGCTGATGACATGCAGCCGCTTCCTGAAGA...GTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR GCA 90 bp GGCCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCCTTGGAATAGTGATGTaGTGGCCACCTCCGCATGAG +
Preference number: 4 (lower is better)
Translates to: GLGSGKQLHRQLWFPHQPLGIVM*WPPPHE
Trigger: CTCATGCGGAGGTGGCCAGCACATCACTATTCCAAG...GGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR GCA 90 bp TGGGCCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACGTCTCCCCTTGGCTCTaGCAAGGACACATCCTCCAT +
Preference number: 4 (lower is better)
Translates to: WAWGLENSSTDSSGFHINVSPWL*QGHILH
Trigger: ATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGAC...GTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR GCA 90 bp GGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGACAGAGATGTCAATaGTGCCAGCACAGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: GVWKTAPQTALVSTSTQPGQRCQ*CQHRAH
Trigger: GTGGGCTCTGTGCTGGCAGCATTGACATCTCTGTCC...TGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR GCA 90 bp AGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGTCTCCCACGAGTACCAGTGCATaGTCAGGAGAACAAATGAGC +
Preference number: 4 (lower is better)
Translates to: SATWTPTACHGIQKPLSPTSTSA*SGEQMS
Trigger: GCTCATTTGTTCTCCTGAGCATGCACTGGTACTCGT...GGGAGACAGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR CCA 90 bp GCTCTGAAGGGCTCTCCAGAGTTTTCTGGATTCGTTACTCGAGCTTCTCAACCACTCGGAGGGAAGCGCTaGCTGCTTCCTCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: ALKGSPEFSGFVTRASQPLGGKR*LLPPGG
Trigger: ACCTCCAGGAGGAAGCAGCCAGCGCTTCCCTCCGAG...TGGTTGAGAAGCTCGAGTAACGAATCCAGAAAACTCTGGAGAGCCCTTCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389964.7
CDS-3UTR CCA 90 bp GTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAGTGGCTGGGGTTCTGTaGGTCCCTCGAGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: VWKTAPQTALVSTSTQPGVAGVL*VPRGVQ
Trigger: TTGAACTCCTCGAGGGACCCACAGAACCCCAGCCAC...TCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CCA 90 bp TCTGCCCTTCGAAGAGCACAGTTTTCCTTAGCAGATAACTGGGGGAAGCCACGGAGAAGTGGTTCTCGGTaGCTGGGGTTCTGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: SALRRAQFSLADNWGKPRRSGSR*LGFCGS
Trigger: GGACCCACAGAACCCCAGCCACCGAGAACCACTTCT...CCGTGGCTTCCCCCAGTTATCTGCTAAGGAAAACTGTGCTCTTCGAAGGGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000547315.6
CDS-3UTR CCA 90 bp GTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAAGAAGTGGTTCTCGGTaGCTGGGGTTCTGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: VWKTAPQTALVSTSTQPGRSGSR*LGFCGS
Trigger: GGACCCACAGAACCCCAGCCACCGAGAACCACTTCT...TCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CCA 90 bp GCCCATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGGAAATGGTCTATGGTaGAAACGTCTTCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: AHECHLDPDSLSWHPETSGNGLW*KRLQLP
Trigger: AGGCAGCTGAAGACGTTTCCACCATAGACCATTTCC...AGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR CCA 90 bp GACCTCCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGCTGGGCCTAGGAAATGGTCTATaGTGGAAACGTCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: DLLSTTVRDKGLSLRLLGLGNGL*WKRLQL
Trigger: CAGCTGAAGACGTTTCCACCATAGACCATTTCCTAG...GCCCAGCAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGGAGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR CCA 90 bp GCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGGGTCCACTAGGAAATGGTCTATaGTGGAAACGTCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: ATSCSPWTKQPRSHAQGPLGNGL*WKRLQL
Trigger: CAGCTGAAGACGTTTCCACCATAGACCATTTCCTAG...TGGACCCTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR CCA 90 bp GACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCAGAACACAGGACAGAGAAAGAAGTTCTCCTaGCAACGGGACTCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: DTSSISWSDPRQAQNTGQRKKFS*QRDSLQ
Trigger: CTGGAGCGAGTCCCGTTGCCAGGAGAACTTCTTTCT...CTGTCCTGTGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp TGGGCCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCCGAGAGCTTGGTCTaGATCAGGGCTTTGCAATGC +
Preference number: 4 (lower is better)
Translates to: WAWGLENSSTDSSGFHINPESLV*IRALQC
Trigger: GCATTGCAAAGCCCTGATCCAGACCAAGCTCTCGGG...GTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CCA 90 bp TCTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAGGAATAGTGATGTGCTaGCCACCTCCGCATGAGGGG +
Preference number: 4 (lower is better)
Translates to: SELMDLATSCSPWTKQPRGIVMC*PPPHEG
Trigger: CCCCTCATGCGGAGGTGGCCAGCACATCACTATTCC...TCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp GTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAGGAATAGTGATGTGCTaGCCACCTCCGCATGAGGGG +
Preference number: 4 (lower is better)
Translates to: VWKTAPQTALVSTSTQPGGIVMC*PPPHEG
Trigger: CCCCTCATGCGGAGGTGGCCAGCACATCACTATTCC...TCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CCA 90 bp CCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGACAAGTTGCTCCCCCTaGACTAAGCAGCCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: PGVWKTAPQTALVSTSTQTSCSP*TKQPRS
Trigger: GCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGT...CTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp TCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAGACACTGAACTCATGGATTTaGCCACAAGTTGCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: SPWLCQGHILHLLVRPETLNSWI*PQVAPP
Trigger: AGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAG...TGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp CATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGTCCTGAACTCATGGATTTaGCCACAAGTTGCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: HECHLDPDSLSWHPETSVLNSWI*PQVAPP
Trigger: AGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAG...GACAGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp CTGAGCGGTCTCAACAGCTGTCTCTCTGGTGACGTTTCAGTGCCTTCCCCTTTTTCCTTAGCAGATAACTaGGGGAAGCCACGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: LSGLNSCLSGDVSVPSPFSLADN*GKPRAH
Trigger: GTGGGCCCGTGGCTTCCCCCAGTTATCTGCTAAGGA...AAAAGGGGAAGGCACTGAAACGTCACCAGAGAGACAGCTGTTGAGACCGCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR CCA 90 bp CCTTTTCCTCTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCGGCTGGAGCCCAGAATaGCCTGTCTGCAGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: PFPLNSWIWPQVAPPGLSGWSPE*PVCRAL
Trigger: GAGAGCTCTGCAGACAGGCCATTCTGGGCTCCAGCC...GCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAGAGGAAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR CCA 90 bp TGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCCCACCGTCAGCTTGCTaGGACCACATTCTCCACAGT +
Preference number: 4 (lower is better)
Translates to: WGLENSSTDSSGFHINPAPPSAC*DHILHS
Trigger: ACTGTGGAGAATGTGGTCCCAGCAAGCTGACGGTGG...GGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR TCA 90 bp GGCCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCTTGTCCAGACTTGGCTaGAGATTCCCGAAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: GLGSGKQLHRQLWFPHQPLSRLG*RFPKAF
Trigger: GAAGGCTTTCGGGAATCTTCAGCCAAGTCTGGACAA...GGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR TCA 90 bp GGGCCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCTTGTCCAGACTTGGCTaGAGATTCCCGAAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: GPGVWKTAPQTALVSTSTLSRLG*RFPKAF
Trigger: GAAGGCTTTCGGGAATCTTCAGCCAAGTCTGGACAA...GGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR TCA 90 bp CTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCAGAACAGAGTTCAAGGGACTGTaGGAATTGTCCAGACTTGGC +
Preference number: 4 (lower is better)
Translates to: LPRTHPPSPGQTRDKPRTEFKGL*ELSRLG
Trigger: GCCAAGTCTGGACAATTCTCACAGTCCCTTGAACTC...TGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR TCA 90 bp AGGACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCAGAACACAGGACGTGGTGTGTATGCTCTaGAGGGCTCTCCAGAGTTTT +
Preference number: 4 (lower is better)
Translates to: RTHPPSPGQTRDKPRTQDVVCML*RALQSF
Trigger: AAAACTCTGGAGAGCCCTTCAGAGCATACACACCAC...GTCCTGTGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR TCA 90 bp CCTTTTCCTCTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCTCGCTCCAGAGGCGCTaGGAAGTAGACGTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: PFPLNSWIWPQVAPPGLSSLQRR*EVDVVC
Trigger: ACACACCACGTCTACTTCTCAGCGCCTCTGGAGCGA...GCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAGAGGAAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR TCA 90 bp AGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCTGGTGACGTTTCAGTGCCTCAGACAGAGGGTTTCTaGGCGGTCTCAACAGCTGTC +
Preference number: 4 (lower is better)
Translates to: RGFLSGLNSCLSGDVSVPQTEGF*AVSTAV
Trigger: GACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTG...AGGCACTGAAACGTCACCAGAGAGACAGCTGTTGAGACCGCTCAGAAACCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR TCA 90 bp TGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAAGAGCACCTGCGAGGCTCTaGGGACACAGCACATCTGTA +
Preference number: 4 (lower is better)
Translates to: WKTAPQTALVSTSTQPGRAPARL*GHSTSV
Trigger: TACAGATGTGCTGTGTCCTCAGAGCCTCGCAGGTGC...TCTTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR TCA 90 bp TTGCGTGGAGTGAACATCCTTTTCCTTGGAATAGTGATGTGCTGGCCACCTCCGTCCTGTCCACAACCGTaGGGGACAAAGGCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LRGVNILFLGIVMCWPPPSCPQP*GTKACP
Trigger: AGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGGA...CGGAGGTGGCCAGCACATCACTATTCCAAGGAAAAGGATGTTCACTCCACGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389964.7
CDS-3UTR TCA 90 bp GGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAAGAATCCTGTCCACAACCGTaGGGGACAAAGGCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: GKQLHRQLWFPHQPSQEESCPQP*GTKACP
Trigger: AGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGGA...TTCTTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR TCA 90 bp GCCAGGGCAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTTACAAAAGTCAGGGCTaGCTTCTTGGCTCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: ARAECDRQRVSERSQQLSYKSQG*LLGSAL
Trigger: AAGGGCAGAGCCAAGAAGTCAGCCCTGACTTTTGTA...AGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTGCCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR TCA 90 bp CATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGTCTGCCTAGAACTGTGCTaGGTACAAAACAGATGCTCC +
Preference number: 4 (lower is better)
Translates to: HECHLDPDSLSWHPETSVCLELC*VQNRCS
Trigger: GGAGCATCTGTTTTGTACTCAGCACAGTTCTAGGCA...GACAGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR TCA 90 bp CTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAACCTTGAGAGCCTTCTaGGGAGATCATGAGGCACGG +
Preference number: 4 (lower is better)
Translates to: LNSWIWPQVAPPGLSSPETLRAF*GDHEAR
Trigger: CCGTGCCTCATGATCTCCTCAGAAGGCTCTCAAGGT...TTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR GCA 90 bp CTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCTTGGAATAGTGATGTaGTGGCCACCTCCGCATGAG +
Preference number: 4 (lower is better)
Translates to: LGSGKQLHRQLWFPHQPSLGIVM*WPPPHE
Trigger: CTCATGCGGAGGTGGCCAGCACATCACTATTCCAAG...GCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR GCA 90 bp GCAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCTGGCTTGGAATAGTGATGTaGTGGCCACCTCCGCATGAG +
Preference number: 4 (lower is better)
Translates to: AECDRQRVSERSQQLSLWLGIVM*WPPPHE
Trigger: CTCATGCGGAGGTGGCCAGCACATCACTATTCCAAG...CCAGAGAGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR GCA 90 bp GACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCTGGTGACGTTTCAGTGGTCTCCCCTTGGCTCTaGCAAGGACACATCCTCCAT +
Preference number: 4 (lower is better)
Translates to: DRGFLSGLNSCLSGDVSVVSPWL*QGHILH
Trigger: ATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGAC...CACTGAAACGTCACCAGAGAGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR GCA 90 bp TCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAATGTACACCCTCATGGTaGCCTGACCACACAGCAGCC +
Preference number: 4 (lower is better)
Translates to: SGKQLHRQLWFPHQPSQECTPSW*PDHTAA
Trigger: GGCTGCTGTGTGGTCAGGGCACCATGAGGGTGTACA...TTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR GCA 90 bp TTTTCCTCTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCCCACCGTCAGCTTaGTGGGACCACATTCTCCAC +
Preference number: 4 (lower is better)
Translates to: FSSELMDLATSCSPWTKQPPPSA*WDHILH
Trigger: GTGGAGAATGTGGTCCCAGCAAGCTGACGGTGGGGG...CTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAGAGGAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR GCA 90 bp TGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAAGATGGGTCCGCGAGTTGTaGTGCTGGGGACAGAGATGT +
Preference number: 4 (lower is better)
Translates to: WKTAPQTALVSTSTQPGRWVREL*CWGQRC
Trigger: ACATCTCTGTCCCCAGCAGCACAACTCGCGGACCCA...TCTTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR CCA 90 bp TGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAAGAGGGGCATGGAGATGCTaGCTTTCCCATCGGACAGGA +
Preference number: 4 (lower is better)
Translates to: WKTAPQTALVSTSTQPGRGAWRC*LSHRTG
Trigger: TCCTGTCCGATGGGAAAGCCAGCATCTCCATGCCCC...TCTTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CCA 90 bp GCCAGGGCAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTAGAACTGCACTCTTTTaGGGCAGAAGTGGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: ARAECDRQRVSERSQQLSRTALF*GRSGSR
Trigger: CCGAGAACCACTTCTGCCCCAAAAGAGTGCAGTTCT...AGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTGCCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CCA 90 bp CTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAAGGTCCACCCTGGCATaGTTGGTGAGAACTGCACTC +
Preference number: 4 (lower is better)
Translates to: LNSWIWPQVAPPGLSSPERSTLA*LVRTAL
Trigger: GAGTGCAGTTCTCACCAACCATGCCAGGGTGGACCT...TTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CCA 90 bp ATGCTGGAGACAGAAGCTGCTGACAGTGAGGAGTCCTTCAGGCTCTTTGAGGTCAGGTCCACCCTGGCATaGTTGGTGAGAACTGCACTC +
Preference number: 4 (lower is better)
Translates to: MLETEAADSEESFRLFEVRSTLA*LVRTAL
Trigger: GAGTGCAGTTCTCACCAACCATGCCAGGGTGGACCT...GACCTCAAAGAGCCTGAAGGACTCCTCACTGTCAGCAGCTTCTGTCTCCAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR CCA 90 bp GGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAAATGGGCTCAGAAGGTaGGACGGCAGAAGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: GVWKTAPQTALVSTSTQPNGLRR*DGRSSC
Trigger: ACAGGAACTTCTGCCGTCCCACCTTCTGAGCCCATT...TGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CCA 90 bp CCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGGGAAATGGTCTATGGTaGAAACGTCTTCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PLALPRTHPPSPGQTRDKGNGLW*KRLQLP
Trigger: AGGCAGCTGAAGACGTTTCCACCATAGACCATTTCC...CTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR CCA 90 bp CCCATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGCTAGGAAATGGTCTATaGTGGAAACGTCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: PMSATWTPTACHGIQKPLLGNGL*WKRLQL
Trigger: CAGCTGAAGACGTTTCCACCATAGACCATTTCCTAG...CAGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR CCA 90 bp GGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAAGAAAGAAGTTCTCCTaGCAACGGGACTCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GVWKTAPQTALVSTSTQPRKKFS*QRDSLQ
Trigger: CTGGAGCGAGTCCCGTTGCCAGGAGAACTTCTTTCT...TGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CCA 90 bp TGGGCCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCAATCTTCCATGATGTaGCCCTGGCCTCCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: WAWGLENSSTDSSGFHINQSSMM*PWPPER
Trigger: CCTTTCTGGAGGCCAGGGCCACATCATGGAAGATTG...GTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CCA 90 bp CCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCAATCTTCCATGATGTaGCCCTGGCCTCCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: PGVWKTAPQTALVSTSTQQSSMM*PWPPER
Trigger: CCTTTCTGGAGGCCAGGGCCACATCATGGAAGATTG...CTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CCA 90 bp GGCCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGGGCTTTGCAATGCTaGAGACAGAAGCTGCTGACA +
Preference number: 4 (lower is better)
Translates to: GLGSGKQLHRQLWFPHQPRALQC*RQKLLT
Trigger: TGTCAGCAGCTTCTGTCTCCAGCATTGCAAAGCCCT...GGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CCA 90 bp TCTGCCCTTCGAAGAGCACAGTTTTCCTTAGCAGATAACTGGGGGAAGCCACGGCCCGAGAGCTTGGTCTaGATCAGGGCTTTGCAATGC +
Preference number: 4 (lower is better)
Translates to: SALRRAQFSLADNWGKPRPESLV*IRALQC
Trigger: GCATTGCAAAGCCCTGATCCAGACCAAGCTCTCGGG...CCGTGGCTTCCCCCAGTTATCTGCTAAGGAAAACTGTGCTCTTCGAAGGGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR CCA 90 bp TCCTTCAGGCTCTTTGAGGTCACAATCTTCCATGATGTGGCCCTGGCCTCCAGAGAGAGATCCCAGGAATaGGCCTGGGGTCTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: SFRLFEVTIFHDVALASRERSQE*AWGLEN
Trigger: GTTTTCCAGACCCCAGGCCCATTCCTGGGATCTCTC...TCTGGAGGCCAGGGCCACATCATGGAAGATTGTGACCTCAAAGAGCCTGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR CCA 90 bp GTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAGAGAGATCCCAGGAATaGGCCTGGGGTCTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: VWKTAPQTALVSTSTQPGERSQE*AWGLEN
Trigger: GTTTTCCAGACCCCAGGCCCATTCCTGGGATCTCTC...TCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CCA 90 bp AGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCTGGTGACGTTTCAGTGCCTACATCCTCCATCTCCTaGTCAGACCCGAGACAAGCC +
Preference number: 4 (lower is better)
Translates to: RGFLSGLNSCLSGDVSVPTSSIS*SDPRQA
Trigger: GGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGT...AGGCACTGAAACGTCACCAGAGAGACAGCTGTTGAGACCGCTCAGAAACCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR CCA 90 bp GCGTGGAGTGAACATCCTTTTCCTTGGAATAGTGATGTGCTGGCCACCTCCGCAACAAGTTGCTCCCCCTaGACTAAGCAGCCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: AWSEHPFPWNSDVLATSATSCSP*TKQPRS
Trigger: GCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGT...TGCGGAGGTGGCCAGCACATCACTATTCCAAGGAAAAGGATGTTCACTCCACGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR CCA 90 bp AGGACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCAGAACACAGGACCTGAACTCATGGATTTaGCCACAAGTTGCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: RTHPPSPGQTRDKPRTQDLNSWI*PQVAPP
Trigger: AGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAG...GTCCTGTGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp AGGGCAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCATCTGTACACCCTCATaGTGCCCTGACCACACAGCA +
Preference number: 4 (lower is better)
Translates to: RAECDRQRVSERSQQLSLICTPS*CPDHTA
Trigger: TGCTGTGTGGTCAGGGCACCATGAGGGTGTACAGAT...GAGAGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
3UTR CAA 72 bp CAGAAGCTGCTGACAGTGAGGAGTCCTTCAGGCTCTTaGAGGTCACAATCTTCCATGATGTGGCCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: QKLLTVRSPSGS*RSQSSMMWPWP
Trigger: AGGCCAGGGCCACATCATGGAAGATTGTGACCTCAAAGAGCCTGAAGGACTCCTCACTGTCAGCAGCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR TCA 90 bp AGGGCAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCTTGTCCAGACTTGGCTaGAGATTCCCGAAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: RAECDRQRVSERSQQLSLLSRLG*RFPKAF
Trigger: GAAGGCTTTCGGGAATCTTCAGCCAAGTCTGGACAA...GAGAGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR TCA 90 bp TCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAACCCTGGCATGGTTGGTaGGAACTGCACTCTTTTGGG +
Preference number: 4 (lower is better)
Translates to: SGKQLHRQLWFPHQPSQEPWHGW*ELHSFG
Trigger: CCCAAAAGAGTGCAGTTCTCACCAACCATGCCAGGG...TTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR TCA 90 bp GACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCAGAACACAGGACAGCCACTGCACTCCAGATaGGTACAGAAGAAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: DTSSISWSDPRQAQNTGQPLHSR*VQKKSK
Trigger: TTTGCTCTTCTTCTGTACTCATCTGGAGTGCAGTGG...CTGTCCTGTGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR GCA 90 bp GGGCCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCGGAAACGTCTTCAGCTaGCTGCTGGACTGTTATTTC +
Preference number: 4 (lower is better)
Translates to: GPGVWKTAPQTALVSTSTGNVFS*LLDCYF
Trigger: GAAATAACAGTCCAGCAGGCAGCTGAAGACGTTTCC...GGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
ENST00000551606.5
CDS-3UTR GCA 90 bp AGGACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCAGAACACAGGACCCAGAAAGGTTCTTCTaGGCAGCATCTATTCCGAGA +
Preference number: 4 (lower is better)
Translates to: RTHPPSPGQTRDKPRTQDPERFF*AASIPR
Trigger: TCTCGGAATAGATGCTGCGCAGAAGAACCTTTCTGG...GTCCTGTGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR GCA 90 bp CTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCAGAACACCAGAAAGGTTCTTCTaGGCAGCATCTATTCCGAGA +
Preference number: 4 (lower is better)
Translates to: LPRTHPPSPGQTRDKPRTPERFF*AASIPR
Trigger: TCTCGGAATAGATGCTGCGCAGAAGAACCTTTCTGG...TGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR GCA 90 bp GAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCTCTGGATCAGGGCTTTaGAATGCTGGAGACAGAAGC +
Preference number: 4 (lower is better)
Translates to: ELMDLATSCSPWTKQPRSSGSGL*NAGDRS
Trigger: GCTTCTGTCTCCAGCATTGCAAAGCCCTGATCCAGA...GCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR GCA 90 bp GGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCATCTGGATCAGGGCTTTaGAATGCTGGAGACAGAAGC +
Preference number: 4 (lower is better)
Translates to: GVWKTAPQTALVSTSTQPSGSGL*NAGDRS
Trigger: GCTTCTGTCTCCAGCATTGCAAAGCCCTGATCCAGA...TGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR GCA 90 bp TTCAGGCTCTTTGAGGTCACAATCTTCCATGATGTGGCCCTGGCCTCCAGAAAGTCTTCAGGAAGCGGCTaGATGTCATCAGCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: FRLFEVTIFHDVALASRKSSGSG*MSSASP
Trigger: AGGGGAGGCTGATGACATGCAGCCGCTTCCTGAAGA...CTTTCTGGAGGCCAGGGCCACATCATGGAAGATTGTGACCTCAAAGAGCCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR GCA 90 bp TGGAGACAGAAGCTGCTGACAGTGAGGAGTCCTTCAGGCTCTTTGAGGTCACAAGTCTCCCCTTGGCTCTaGCAAGGACACATCCTCCAT +
Preference number: 4 (lower is better)
Translates to: WRQKLLTVRSPSGSLRSQVSPWL*QGHILH
Trigger: ATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGAC...TTGTGACCTCAAAGAGCCTGAAGGACTCCTCACTGTCAGCAGCTTCTGTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR GCA 90 bp AGTCCTTCAGGCTCTTTGAGGTCACAATCTTCCATGATGTGGCCCTGGCCTCCAGATTTGGCCACAAGTTaGTCCCCCTGGACTAAGCAG +
Preference number: 4 (lower is better)
Translates to: SPSGSLRSQSSMMWPWPPDLATS*SPWTKQ
Trigger: CTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATC...TGGAGGCCAGGGCCACATCATGGAAGATTGTGACCTCAAAGAGCCTGAAGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR GCA 90 bp TTTTCCTCTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGTGTACACCCTCATGGTaGCCTGACCACACAGCAGCC +
Preference number: 4 (lower is better)
Translates to: FSSELMDLATSCSPWTKQCTPSW*PDHTAA
Trigger: GGCTGCTGTGTGGTCAGGGCACCATGAGGGTGTACA...CTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAGAGGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR GCA 90 bp CTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAATGGAAAGTGCCCACGTaGTGCTGTGGAACTGACACA +
Preference number: 4 (lower is better)
Translates to: LNSWIWPQVAPPGLSSPEWKVPT*CCGTDT
Trigger: TGTGTCAGTTCCACAGCAGCACGTGGGCACTTTCCA...TTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS-3UTR GCA 90 bp GAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAAGAAACAGAGATGTCAATGCTaGCAGCACAGAGCCCACCCC +
Preference number: 4 (lower is better)
Translates to: ENSSTDSSGFHINPARKKQRCQC*QHRAHP
Trigger: GGGGTGGGCTCTGTGCTGGCAGCATTGACATCTCTG...TTTCTTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR GCA 90 bp AGGACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCAGAACACAGGACAGAACACACAAACCATaGTCTACTCCACCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: RTHPPSPGQTRDKPRTQDRTHKP*STPPPK
Trigger: CTTTGGGGGTGGAGTAGAGCATGGTTTGTGTGTTCT...GTCCTGTGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR GCA 90 bp CCCATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGAACTACGAGTACCAGTaGATGCTCAGGAGAACAAAT +
Preference number: 4 (lower is better)
Translates to: PMSATWTPTACHGIQKPLNYEYQ*MLRRTN
Trigger: ATTTGTTCTCCTGAGCATGCACTGGTACTCGTAGTT...CAGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR CCA 90 bp TTGCGTGGAGTGAACATCCTTTTCCTTGGAATAGTGATGTGCTGGCCACCTCCGCTGGCTGCTTCCTCCTaGAGGTCACTCAAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LRGVNILFLGIVMCWPPPLAASS*RSLKGS
Trigger: AGAGCCTTTGAGTGACCTCCAGGAGGAAGCAGCCAG...CGGAGGTGGCCAGCACATCACTATTCCAAGGAAAAGGATGTTCACTCCACGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR CCA 90 bp TCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGAATTGTCCAGACTTaGCTGAAGATTCCCGAAAGC +
Preference number: 4 (lower is better)
Translates to: SPWLCQGHILHLLVRPETRIVQT*LKIPES
Trigger: GCTTTCGGGAATCTTCAGCCAAGTCTGGACAATTCT...TGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CCA 90 bp GAGGCGCTGAGAAGTAGACGTGGTGTGTATGCTCTGAAGGGCTCTCCAGAGTTTTCCATGATGTGGCCCTaGCCTCCAGAAAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: EALRSRRGVYALKGSPEFSMMWP*PPERFF
Trigger: GAAGAACCTTTCTGGAGGCCAGGGCCACATCATGGA...AAACTCTGGAGAGCCCTTCAGAGCATACACACCACGTCTACTTCTCAGCGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR CCA 90 bp GTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGATCCATGATGTGGCCCTaGCCTCCAGAAAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: VWKTAPQTALVSTSTQPGSMMWP*PPERFF
Trigger: GAAGAACCTTTCTGGAGGCCAGGGCCACATCATGGA...TCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CCA 90 bp GCAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCTGGAGGGCTTTGCAATGCTaGAGACAGAAGCTGCTGACA +
Preference number: 4 (lower is better)
Translates to: AECDRQRVSERSQQLSLWRALQC*RQKLLT
Trigger: TGTCAGCAGCTTCTGTCTCCAGCATTGCAAAGCCCT...CCAGAGAGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR CCA 90 bp TGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGGCTTTGCAATGCTaGAGACAGAAGCTGCTGACA +
Preference number: 4 (lower is better)
Translates to: WGLENSSTDSSGFHINPARALQC*RQKLLT
Trigger: TGTCAGCAGCTTCTGTCTCCAGCATTGCAAAGCCCT...GGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CCA 90 bp TTTTCCTCTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGGGAATAGTGATGTGCTaGCCACCTCCGCATGAGGGG +
Preference number: 4 (lower is better)
Translates to: FSSELMDLATSCSPWTKQGIVMC*PPPHEG
Trigger: CCCCTCATGCGGAGGTGGCCAGCACATCACTATTCC...CTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAGAGGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp CCTTTTCCTCTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCACCTCTGTCTCCCCTTaGCTCTGCCAAGGACACATC +
Preference number: 4 (lower is better)
Translates to: PFPLNSWIWPQVAPPGLSTSVSP*LCQGHI
Trigger: GATGTGTCCTTGGCAGAGCCAAGGGGAGACAGAGGT...GCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAGAGGAAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp GGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAAGAAACCTCTGTCTCCCCTTaGCTCTGCCAAGGACACATC +
Preference number: 4 (lower is better)
Translates to: GKQLHRQLWFPHQPSQEETSVSP*LCQGHI
Trigger: GATGTGTCCTTGGCAGAGCCAAGGGGAGACAGAGGT...TTCTTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp TGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCCTGAACTCATGGATTTaGCCACAAGTTGCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: WGLENSSTDSSGFHINPALNSWI*PQVAPP
Trigger: AGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAG...GGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp CCCATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGTTTCCTCTGAACTCATaGATTTGGCCACAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: PMSATWTPTACHGIQKPLFPLNS*IWPQVA
Trigger: AGCAACTTGTGGCCAAATCCATGAGTTCAGAGGAAA...CAGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp CCTTTTCCTCTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCCCTATGACCCACAGATaGCAGGGACCTCAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: PFPLNSWIWPQVAPPGLSPMTHR*QGPQER
Trigger: TCTCTCCTGAGGTCCCTGCCATCTGTGGGTCATAGG...GCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAGAGGAAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550614.5
CDS-3UTR TCA 90 bp GAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAAGAAACCCTGGCATGGTTGGTaGGAACTGCACTCTTTTGGG +
Preference number: 4 (lower is better)
Translates to: ENSSTDSSGFHINPARKKPWHGW*ELHSFG
Trigger: CCCAAAAGAGTGCAGTTCTCACCAACCATGCCAGGG...TTTCTTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR TCA 90 bp GTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAGTGGTGTGTATGCTCTaGAGGGCTCTCCAGAGTTTT +
Preference number: 4 (lower is better)
Translates to: VWKTAPQTALVSTSTQPGVVCML*RALQSF
Trigger: AAAACTCTGGAGAGCCCTTCAGAGCATACACACCAC...TCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR TCA 90 bp GTTCTTCTGCGCAGCATCTATTCCGAGAACAAGAAAGAAGTTCTCCTGGCAACGTCGCTCCAGAGGCGCTaGGAAGTAGACGTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: VLLRSIYSENKKEVLLATSLQRR*EVDVVC
Trigger: ACACACCACGTCTACTTCTCAGCGCCTCTGGAGCGA...CGTTGCCAGGAGAACTTCTTTCTTGTTCTCGGAATAGATGCTGCGCAGAAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR GCA 90 bp TGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCCCAGAAAGGTTCTTCTaGGCAGCATCTATTCCGAGA +
Preference number: 4 (lower is better)
Translates to: WGLENSSTDSSGFHINPAPERFF*AASIPR
Trigger: TCTCGGAATAGATGCTGCGCAGAAGAACCTTTCTGG...GGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR GCA 90 bp CAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCTGGTTCTGGATCAGGGCTTTaGAATGCTGGAGACAGAAGC +
Preference number: 4 (lower is better)
Translates to: QSVTDRGFLSGLNSCLSGSGSGL*NAGDRS
Trigger: GCTTCTGTCTCCAGCATTGCAAAGCCCTGATCCAGA...ACCAGAGAGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR GCA 90 bp TCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAAGATTTGGCCACAAGTTaGTCCCCCTGGACTAAGCAG +
Preference number: 4 (lower is better)
Translates to: SGKQLHRQLWFPHQPSQEDLATS*SPWTKQ
Trigger: CTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATC...TTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR GCA 90 bp CAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCTGGTCTGACTTCTTGGCTCTaGCCTTCGAAGAGCACAGTT +
Preference number: 4 (lower is better)
Translates to: QSVTDRGFLSGLNSCLSGLTSWL*PSKSTV
Trigger: AACTGTGCTCTTCGAAGGGCAGAGCCAAGAAGTCAG...ACCAGAGAGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR GCA 90 bp CTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAAAAGTGCCCACGTGCTaGTGTGGAACTGACACAAAC +
Preference number: 4 (lower is better)
Translates to: LNSWIWPQVAPPGLSSPEKVPTC*CGTDTN
Trigger: GTTTGTGTCAGTTCCACAGCAGCACGTGGGCACTTT...TTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS-3UTR GCA 90 bp CTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAACTGAGATGGTGCCACTaGACTCCAGATGAGTACAGA +
Preference number: 4 (lower is better)
Translates to: LNSWIWPQVAPPGLSSPELRWCH*TPDEYR
Trigger: TCTGTACTCATCTGGAGTGCAGTGGCACCATCTCAG...TTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR CCA 90 bp GACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCAGAACACAGGACAGAGAATTGTCCAGACTTaGCTGAAGATTCCCGAAAGC +
Preference number: 4 (lower is better)
Translates to: DTSSISWSDPRQAQNTGQRIVQT*LKIPES
Trigger: GCTTTCGGGAATCTTCAGCCAAGTCTGGACAATTCT...CTGTCCTGTGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CCA 90 bp TGGGCCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACGGAAATGGTCTATGGTaGAAACGTCTTCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: WAWGLENSSTDSSGFHINGNGLW*KRLQLP
Trigger: AGGCAGCTGAAGACGTTTCCACCATAGACCATTTCC...GTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CCA 90 bp GAGGCTCTCGCAGGCCAGTGGTGCGACCTCCTGTCCACAACCGTGAGGGACAAACTTATTTCTAGGAAATaGTCTATGGTGGAAACGTCT +
Preference number: 4 (lower is better)
Translates to: EALAGQWCDLLSTTVRDKLISRK*SMVETS
Trigger: AGACGTTTCCACCATAGACCATTTCCTAGAAATAAG...TTTGTCCCTCACGGTTGTGGACAGGAGGTCGCACCACTGGCCTGCGAGAGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR CCA 90 bp CACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCAGAACACAGGACAGGTCTCTCCAGAGTTTTCTaGATTCGTTACTCGAGCTTC +
Preference number: 4 (lower is better)
Translates to: HILHLLVRPETSPEHRTGLSRVF*IRYSSF
Trigger: GAAGCTCGAGTAACGAATCCAGAAAACTCTGGAGAG...ACCTGTCCTGTGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000550614.5
CDS-3UTR CCA 90 bp TGGAGACAGAAGCTGCTGACAGTGAGGAGTCCTTCAGGCTCTTTGAGGTCACAACAATCTTCCATGATGTaGCCCTGGCCTCCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: WRQKLLTVRSPSGSLRSQQSSMM*PWPPER
Trigger: CCTTTCTGGAGGCCAGGGCCACATCATGGAAGATTG...TTGTGACCTCAAAGAGCCTGAAGGACTCCTCACTGTCAGCAGCTTCTGTCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR CCA 90 bp CTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAAGGGCTTTGCAATGCTaGAGACAGAAGCTGCTGACA +
Preference number: 4 (lower is better)
Translates to: LNSWIWPQVAPPGLSSPERALQC*RQKLLT
Trigger: TGTCAGCAGCTTCTGTCTCCAGCATTGCAAAGCCCT...TTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp CAGGGGGCCCATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAACTCTCCAGAGTTTTCTaGATTCGTTACACAATTTAT +
Preference number: 4 (lower is better)
Translates to: QGAHECHLDPDSLSWHPELSRVF*IRYTIY
Trigger: ATAAATTGTGTAACGAATCCAGAAAACTCTGGAGAG...TTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGGCCCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS-3UTR TCA 90 bp GGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAAAATGTTCTCATAGCTaGGAATGGGCTCAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: GVWKTAPQTALVSTSTQPKCSHS*EWAQKV
Trigger: CACCTTCTGAGCCCATTCTCAGCTATGAGAACATTT...TGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR GCA 90 bp ATGCTGGAGACAGAAGCTGCTGACAGTGAGGAGTCCTTCAGGCTCTTTGAGGTCATGGTTGGTGAGAACTaGACTCTTTTGGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: MLETEAADSEESFRLFEVMVGEN*TLLGQK
Trigger: CTTCTGCCCCAAAAGAGTGCAGTTCTCACCAACCAT...GACCTCAAAGAGCCTGAAGGACTCCTCACTGTCAGCAGCTTCTGTCTCCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR GCA 90 bp GGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAAGAAATCAGGGCTTTGCAATaGTGGAGACAGAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GKQLHRQLWFPHQPSQEEIRALQ*WRQKLL
Trigger: CAGCAGCTTCTGTCTCCAGCATTGCAAAGCCCTGAT...TTCTTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR GCA 90 bp TGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAAGATCTGGATCAGGGCTTTaGAATGCTGGAGACAGAAGC +
Preference number: 4 (lower is better)
Translates to: WKTAPQTALVSTSTQPGRSGSGL*NAGDRS
Trigger: GCTTCTGTCTCCAGCATTGCAAAGCCCTGATCCAGA...TCTTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR GCA 90 bp GAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAAGAAAGATTTGGCCACAAGTTaGTCCCCCTGGACTAAGCAG +
Preference number: 4 (lower is better)
Translates to: ENSSTDSSGFHINPARKKDLATS*SPWTKQ
Trigger: CTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATC...TTTCTTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp GTGTATGCTCTGAAGGGCTCTCCAGAGTTTTCTGGATTCGTTACTCGAGCTTCTCTGGCTGCTTCCTCCTaGAGGTCACTCAAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: VYALKGSPEFSGFVTRASLAASS*RSLKGS
Trigger: AGAGCCTTTGAGTGACCTCCAGGAGGAAGCAGCCAG...AGAAGCTCGAGTAACGAATCCAGAAAACTCTGGAGAGCCCTTCAGAGCATACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389964.7
CDS-3UTR CCA 90 bp CTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCAGAATTGTCCAGACTTaGCTGAAGATTCCCGAAAGC +
Preference number: 4 (lower is better)
Translates to: LGSGKQLHRQLWFPHQPSRIVQT*LKIPES
Trigger: GCTTTCGGGAATCTTCAGCCAAGTCTGGACAATTCT...GCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CCA 90 bp GCTGCTGACAGTGAGGAGTCCTTCAGGCTCTTTGAGGTCACAATCTTCCATGATAATGGGCTCAGAAGGTaGGACGGCAGAAGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: AADSEESFRLFEVTIFHDNGLRR*DGRSSC
Trigger: ACAGGAACTTCTGCCGTCCCACCTTCTGAGCCCATT...ATCATGGAAGATTGTGACCTCAAAGAGCCTGAAGGACTCCTCACTGTCAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR CCA 90 bp CTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCTAGGAAATGGTCTATaGTGGAAACGTCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LGSGKQLHRQLWFPHQPSLGNGL*WKRLQL
Trigger: CAGCTGAAGACGTTTCCACCATAGACCATTTCCTAG...GCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CCA 90 bp AGGGCAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCCTCTCCAGAGTTTTCTaGATTCGTTACTCGAGCTTC +
Preference number: 4 (lower is better)
Translates to: RAECDRQRVSERSQQLSLLSRVF*IRYSSF
Trigger: GAAGCTCGAGTAACGAATCCAGAAAACTCTGGAGAG...GAGAGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000550614.5
CDS-3UTR CCA 90 bp GAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAAGAAATCCATGATGTGGCCCTaGCCTCCAGAAAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: ENSSTDSSGFHINPARKKSMMWP*PPERFF
Trigger: GAAGAACCTTTCTGGAGGCCAGGGCCACATCATGGA...TTTCTTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CCA 90 bp GGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAAGAAAGGGCTTTGCAATGCTaGAGACAGAAGCTGCTGACA +
Preference number: 4 (lower is better)
Translates to: GKQLHRQLWFPHQPSQEERALQC*RQKLLT
Trigger: TGTCAGCAGCTTCTGTCTCCAGCATTGCAAAGCCCT...TTCTTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CCA 90 bp AGAAGTAGACGTGGTGTGTATGCTCTGAAGGGCTCTCCAGAGTTTTCTGGATTCACATCCTCCATCTCCTaGTCAGACCCGAGACAAGCC +
Preference number: 4 (lower is better)
Translates to: RSRRGVYALKGSPEFSGFTSSIS*SDPRQA
Trigger: GGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGT...GAATCCAGAAAACTCTGGAGAGCCCTTCAGAGCATACACACCACGTCTACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR CCA 90 bp GTGTATGCTCTGAAGGGCTCTCCAGAGTTTTCTGGATTCGTTACTCGAGCTTCTCCCGACAGCCTGTCATaGCATCCAGAAACCTCTGTC +
Preference number: 4 (lower is better)
Translates to: VYALKGSPEFSGFVTRASPDSLS*HPETSV
Trigger: GACAGAGGTTTCTGGATGCCATGACAGGCTGTCGGG...AGAAGCTCGAGTAACGAATCCAGAAAACTCTGGAGAGCCCTTCAGAGCATACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389964.7
CDS-3UTR CCA 90 bp GAGACAGAAGCTGCTGACAGTGAGGAGTCCTTCAGGCTCTTTGAGGTCACAATCCTGAACTCATGGATTTaGCCACAAGTTGCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: ETEAADSEESFRLFEVTILNSWI*PQVAPP
Trigger: AGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAG...GATTGTGACCTCAAAGAGCCTGAAGGACTCCTCACTGTCAGCAGCTTCTGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR CCA 90 bp GGCCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCTTTCCTCTGAACTCATaGATTTGGCCACAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: GLGSGKQLHRQLWFPHQPFPLNS*IWPQVA
Trigger: AGCAACTTGTGGCCAAATCCATGAGTTCAGAGGAAA...GGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp CCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCTCTCCAGAGTTTTCTaGATTCGTTACTGGAAAACA +
Preference number: 4 (lower is better)
Translates to: PLALPRTHPPSPGQTRDKLSRVF*IRYWKT
Trigger: TGTTTTCCAGTAACGAATCCAGAAAACTCTGGAGAG...CTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR CCA 90 bp AGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCTGGTGACGTTTCAGTGCCTTTGAAAGTGTGTCCCTaGAAAATGGCCATCTGCGAG +
Preference number: 4 (lower is better)
Translates to: RGFLSGLNSCLSGDVSVPLKVCP*KMAICE
Trigger: CTCGCAGATGGCCATTTTCCAGGGACACACTTTCAA...AGGCACTGAAACGTCACCAGAGAGACAGCTGTTGAGACCGCTCAGAAACCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550614.5
CDS-3UTR TCA 90 bp TCTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAAATGTTCTCATAGCTaGGAATGGGCTCAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: SELMDLATSCSPWTKQPRKCSHS*EWAQKV
Trigger: CACCTTCTGAGCCCATTCTCAGCTATGAGAACATTT...TCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR TCA 90 bp GAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAAGAAAGTGGTGTGTATGCTCTaGAGGGCTCTCCAGAGTTTT +
Preference number: 4 (lower is better)
Translates to: ENSSTDSSGFHINPARKKVVCML*RALQSF
Trigger: AAAACTCTGGAGAGCCCTTCAGAGCATACACACCAC...TTTCTTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR GCA 90 bp TGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCCTGTCTGTCTTTCAATaGTCAGTTGAAAGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: WGLENSSTDSSGFHINPALSVFQ*SVESVS
Trigger: GGACACACTTTCAACTGAGCATTGAAAGACAGACAG...GGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000550614.5
CDS-3UTR GCA 90 bp CTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCTGTCTGTCTTTCAATaGTCAGTTGAAAGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: LGSGKQLHRQLWFPHQPSLSVFQ*SVESVS
Trigger: GGACACACTTTCAACTGAGCATTGAAAGACAGACAG...GCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000550614.5
CDS-3UTR GCA 90 bp CCTTTTCCTCTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCCCAGAAAGGTTCTTCTaGGCAGCATCTATTCCGAGA +
Preference number: 4 (lower is better)
Translates to: PFPLNSWIWPQVAPPGLSPERFF*AASIPR
Trigger: TCTCGGAATAGATGCTGCGCAGAAGAACCTTTCTGG...GCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAGAGGAAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR GCA 90 bp TTTGAGGTCACAATCTTCCATGATGTGGCCCTGGCCTCCAGAAAGGTTCTTCTGTCTGGATCAGGGCTTTaGAATGCTGGAGACAGAAGC +
Preference number: 4 (lower is better)
Translates to: FEVTIFHDVALASRKVLLSGSGL*NAGDRS
Trigger: GCTTCTGTCTCCAGCATTGCAAAGCCCTGATCCAGA...CAGAAGAACCTTTCTGGAGGCCAGGGCCACATCATGGAAGATTGTGACCTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR CCA 90 bp CTGACAGTGAGGAGTCCTTCAGGCTCTTTGAGGTCACAATCTTCCATGATGTGGAGAACTGCACTCTTTTaGGGCAGAAGTGGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: LTVRSPSGSLRSQSSMMWRTALF*GRSGSR
Trigger: CCGAGAACCACTTCTGCCCCAAAAGAGTGCAGTTCT...CCACATCATGGAAGATTGTGACCTCAAAGAGCCTGAAGGACTCCTCACTGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR CCA 90 bp TCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAAGGAAATGGTCTATGGTaGAAACGTCTTCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SGKQLHRQLWFPHQPSQEGNGLW*KRLQLP
Trigger: AGGCAGCTGAAGACGTTTCCACCATAGACCATTTCC...TTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CCA 90 bp ATGCTGGAGACAGAAGCTGCTGACAGTGAGGAGTCCTTCAGGCTCTTTGAGGTCCTAGGAAATGGTCTATaGTGGAAACGTCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: MLETEAADSEESFRLFEVLGNGL*WKRLQL
Trigger: CAGCTGAAGACGTTTCCACCATAGACCATTTCCTAG...GACCTCAAAGAGCCTGAAGGACTCCTCACTGTCAGCAGCTTCTGTCTCCAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR CCA 90 bp GATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGCTTATTTCTAGGAAATaGTCTATGGTGGAAACGTCT +
Preference number: 4 (lower is better)
Translates to: DLATSCSPWTKQPRSHAQLISRK*SMVETS
Trigger: AGACGTTTCCACCATAGACCATTTCCTAGAAATAAG...CTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR CCA 90 bp CCTTTTCCTCTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCTCCCTGCAGGAGCACTaGGCTGTCTCATTTATTTGT +
Preference number: 4 (lower is better)
Translates to: PFPLNSWIWPQVAPPGLSSLQEH*AVSFIC
Trigger: ACAAATAAATGAGACAGCCCAGTGCTCCTGCAGGGA...GCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAGAGGAAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR CCA 90 bp GGGCCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCAAGCCAAGAGGCGTATaGCTGTTAAGAACTCTAAAA +
Preference number: 4 (lower is better)
Translates to: GPGVWKTAPQTALVSTSTKPRGV*LLRTLK
Trigger: TTTTAGAGTTCTTAACAGCCATACGCCTCTTGGCTT...GGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR TCA 90 bp TGGAGACAGAAGCTGCTGACAGTGAGGAGTCCTTCAGGCTCTTTGAGGTCACAAAAATGTTCTCATAGCTaGGAATGGGCTCAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: WRQKLLTVRSPSGSLRSQKCSHS*EWAQKV
Trigger: CACCTTCTGAGCCCATTCTCAGCTATGAGAACATTT...TTGTGACCTCAAAGAGCCTGAAGGACTCCTCACTGTCAGCAGCTTCTGTCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR TCA 90 bp CCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCTTTCAATGCTCAGTTaGAAGTGTGTCCCACAATTT +
Preference number: 4 (lower is better)
Translates to: PGVWKTAPQTALVSTSTQLSMLS*KCVPQF
Trigger: AAATTGTGGGACACACTTTCAACTGAGCATTGAAAG...CTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389964.7
CDS-3UTR GCA 90 bp TTTGAGGTCACAATCTTCCATGATGTGGCCCTGGCCTCCAGAAAGGTTCTTCTGATGGTTGGTGAGAACTaGACTCTTTTGGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: FEVTIFHDVALASRKVLLMVGEN*TLLGQK
Trigger: CTTCTGCCCCAAAAGAGTGCAGTTCTCACCAACCAT...CAGAAGAACCTTTCTGGAGGCCAGGGCCACATCATGGAAGATTGTGACCTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR GCA 90 bp CTGACAGTGAGGAGTCCTTCAGGCTCTTTGAGGTCACAATCTTCCATGATGTGGGGAAACGTCTTCAGCTaGCTGCTGGACTGTTATTTC +
Preference number: 4 (lower is better)
Translates to: LTVRSPSGSLRSQSSMMWGNVFS*LLDCYF
Trigger: GAAATAACAGTCCAGCAGGCAGCTGAAGACGTTTCC...CCACATCATGGAAGATTGTGACCTCAAAGAGCCTGAAGGACTCCTCACTGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR GCA 90 bp GAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAAGAAAGGAAACGTCTTCAGCTaGCTGCTGGACTGTTATTTC +
Preference number: 4 (lower is better)
Translates to: ENSSTDSSGFHINPARKKGNVFS*LLDCYF
Trigger: GAAATAACAGTCCAGCAGGCAGCTGAAGACGTTTCC...TTTCTTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CCA 90 bp AAAGGTTCTTCTGCGCAGCATCTATTCCGAGAACAAGAAAGAAGTTCTCCTGGCAATGGGCTCAGAAGGTaGGACGGCAGAAGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: KGSSAQHLFREQERSSPGNGLRR*DGRSSC
Trigger: ACAGGAACTTCTGCCGTCCCACCTTCTGAGCCCATT...GCCAGGAGAACTTCTTTCTTGTTCTCGGAATAGATGCTGCGCAGAAGAACCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR CCA 90 bp CCTCCAGAAAGGTTCTTCTGCGCAGCATCTATTCCGAGAACAAGAAAGAAGTTCAGAAAGAAGTTCTCCTaGCAACGGGACTCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PPERFFCAASIPRTRKKFRKKFS*QRDSLQ
Trigger: CTGGAGCGAGTCCCGTTGCCAGGAGAACTTCTTTCT...GAACTTCTTTCTTGTTCTCGGAATAGATGCTGCGCAGAAGAACCTTTCTGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR CCA 90 bp GTCCTCCTGATTTTAGCAAACGTCGCTATTAAAGAGTGTCAGTTTGAGCTTGCGACCTCTGTCTCCCCTTaGCTCTGCCAAGGACACATC +
Preference number: 4 (lower is better)
Translates to: VLLILANVAIKECQFELATSVSP*LCQGHI
Trigger: GATGTGTCCTTGGCAGAGCCAAGGGGAGACAGAGGT...CGCAAGCTCAAACTGACACTCTTTAATAGCGACGTTTGCTAAAATCAGGAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR CCA 90 bp TGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCGACCAGATATTTTGCTaGTTTTGTTCACTCAAGTGC +
Preference number: 4 (lower is better)
Translates to: WGLENSSTDSSGFHINPADQIFC*FCSLKC
Trigger: GCACTTGAGTGAACAAAACCAGCAAAATATCTGGTC...GGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR CCA 90 bp GACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCAGAACACAGGACAGTTCTGGATTCGTTACTaGAAAACAGATGCACTTGTT +
Preference number: 4 (lower is better)
Translates to: DTSSISWSDPRQAQNTGQFWIRY*KTDALV
Trigger: AACAAGTGCATCTGTTTTCCAGTAACGAATCCAGAA...CTGTCCTGTGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR CCA 90 bp TGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCCTTATTTCTAGGAAATaGTCTATGGTGGAAACGTCT +
Preference number: 4 (lower is better)
Translates to: WGLENSSTDSSGFHINPALISRK*SMVETS
Trigger: AGACGTTTCCACCATAGACCATTTCCTAGAAATAAG...GGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CCA 90 bp TGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAAGATTTCCTCTGAACTCATaGATTTGGCCACAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: WKTAPQTALVSTSTQPGRFPLNS*IWPQVA
Trigger: AGCAACTTGTGGCCAAATCCATGAGTTCAGAGGAAA...TCTTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CCA 90 bp CCTCCAGAAAGGTTCTTCTGCGCAGCATCTATTCCGAGAACAAGAAAGAAGTTCGGAAATGGTCTATGGTaGAAACGTCTTCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PPERFFCAASIPRTRKKFGNGLW*KRLQLP
Trigger: AGGCAGCTGAAGACGTTTCCACCATAGACCATTTCC...GAACTTCTTTCTTGTTCTCGGAATAGATGCTGCGCAGAAGAACCTTTCTGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR CCA 90 bp CCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCTCTCCAGAGTTTTCTaGATTCGTTACACAATTTAT +
Preference number: 4 (lower is better)
Translates to: PGVWKTAPQTALVSTSTQLSRVF*IRYTIY
Trigger: ATAAATTGTGTAACGAATCCAGAAAACTCTGGAGAG...CTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000547315.6
ENST00000551606.5
CDS-3UTR CCA 90 bp TCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAACTTATTTCTAGGAAATaGTCTATGGTGGAAACGTCT +
Preference number: 4 (lower is better)
Translates to: SGKQLHRQLWFPHQPSQELISRK*SMVETS
Trigger: AGACGTTTCCACCATAGACCATTTCCTAGAAATAAG...TTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CCA 90 bp GTGTATGCTCTGAAGGGCTCTCCAGAGTTTTCTGGATTCGTTACTCGAGCTTCTCTTATTTCTAGGAAATaGTCTATGGTGGAAACGTCT +
Preference number: 4 (lower is better)
Translates to: VYALKGSPEFSGFVTRASLISRK*SMVETS
Trigger: AGACGTTTCCACCATAGACCATTTCCTAGAAATAAG...AGAAGCTCGAGTAACGAATCCAGAAAACTCTGGAGAGCCCTTCAGAGCATACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389964.7
CDS-3UTR CCA 90 bp GAAAAATTCCTCATAAAGGTACAAAGTCCTCCTGATTTTAGCAAACGTCGCTATTTTCCTCTGAACTCATaGATTTGGCCACAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: EKFLIKVQSPPDFSKRRYFPLNS*IWPQVA
Trigger: AGCAACTTGTGGCCAAATCCATGAGTTCAGAGGAAA...ATAGCGACGTTTGCTAAAATCAGGAGGACTTTGTACCTTTATGAGGAATTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS GCA 90 bp GCGAGAGCCGGGCGCCCGCGGGAGTCCCAAGTGGGAAGGAGTGGGTaGGGCGCCCCGGGGCCTCCCGAGAGTCCCTCTCGCACGCGGCCC +
Preference number: 5 (lower is better)
Translates to: ARAGRPRESQVGRSG*GAPGPPESPSRTRP
Trigger: GGGCCGCGTGCGAGAGGGACTCTCGGGAGGCCCCGGGGCGCCGCACCCACTCCTTCCCACTTGGGACTCCCGCGGGCGCCCGGCTCTCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS GCA 90 bp GTCGCCGCCTCGGCGGGGCCGCGCGGGACCAGGGCGAGAGAAACCTaGAACCAGCCGTTCCCTCCTGCCTGCGCCGCCCCGTTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: VAASAGPRGTRARET*NQPFPPACAAPLPG
Trigger: GCCAGGCAACGGGGCGGCGCAGGCAGGAGGGAACGGCTGGTTGCAGGTTTCTCTCGCCCTGGTCCCGCGCGGCCCCGCCGAGGCGGCGAC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551606.5
CDS CCA 90 bp AGGAGCGAGAGCCGGGCGCCCGCGGGAGTCCCAAGTGGGAAGGAGTaGGTGCGGCGCCCCGGGGCCTCCCGAGAGTCCCTCTCGCACGCG +
Preference number: 5 (lower is better)
Translates to: RSESRAPAGVPSGKE*VRRPGASRESLSHA
Trigger: CGCGTGCGAGAGGGACTCTCGGGAGGCCCCGGGGCGCCGCACCCACTCCTTCCCACTTGGGACTCCCGCGGGCGCCCGGCTCTCGCTCCT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS CCA 90 bp CGCTGGCCAGAGGAGCGAGAGCCGGGCGCCCGCGGGAGTCCCAAGTaGGAAGGAGTGGGTGCGGCGCCCCGGGGCCTCCCGAGAGTCCCT +
Preference number: 5 (lower is better)
Translates to: RWPEEREPGARGSPK*EGVGAAPRGLPRVP
Trigger: AGGGACTCTCGGGAGGCCCCGGGGCGCCGCACCCACTCCTTCCCACTTGGGACTCCCGCGGGCGCCCGGCTCTCGCTCCTCTGGCCAGCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS CCA 90 bp GAACGCCTGGGCCTGGACAGGGCCCGAGGTGGCCGGCTAAGCGCCTaGCCCACGGCTCCCGAGAGTCCCCGCACCCACCTTGGTCGCCGC +
Preference number: 5 (lower is better)
Translates to: ERLGLDRARGGRLSA*PTAPESPRTHLGRR
Trigger: GCGGCGACCAAGGTGGGTGCGGGGACTCTCGGGAGCCGTGGGCCAGGCGCTTAGCCGGCCACCTCGGGCCCTGTCCAGGCCCAGGCGTTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS CCA 90 bp CCGCAGAGCAGCCCTGGAACGCCTGGGCCTGGACAGGGCCCGAGGTaGCCGGCTAAGCGCCTGGCCCACGGCTCCCGAGAGTCCCCGCAC +
Preference number: 5 (lower is better)
Translates to: PQSSPGTPGPGQGPR*PAKRLAHGSRESPH
Trigger: GTGCGGGGACTCTCGGGAGCCGTGGGCCAGGCGCTTAGCCGGCCACCTCGGGCCCTGTCCAGGCCCAGGCGTTCCAGGGCTGCTCTGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS GCA 90 bp CTTGCATCTTGGAGCCCCCAGGCCAGCAGAGGCCCGATGGGCAGCTaGTCAGGAGACATGCACGCCGGGGTGCTGGCCGCCCAGGACTGC +
Preference number: 5 (lower is better)
Translates to: LASWSPQASRGPMGS*SGDMHAGVLAAQDC
Trigger: GCAGTCCTGGGCGGCCAGCACCCCGGCGTGCATGTCTCCTGAGCAGCTGCCCATCGGGCCTCTGCTGGCCTGGGGGCTCCAAGATGCAAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS CCA 90 bp GGAACTGACACAAACCACAGGAATGGCCCGGTCGCCCGGGAGTCCTaGCTTCCTCCCACGCAGGCGGGCGCGGAGTCCGACACAGAGGCG +
Preference number: 5 (lower is better)
Translates to: GTDTNHRNGPVARES*LPPTQAGAESDTEA
Trigger: CGCCTCTGTGTCGGACTCCGCGCCCGCCTGCGTGGGAGGAAGCCAGGACTCCCGGGCGACCGGGCCATTCCTGTGGTTTGTGTCAGTTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS-3UTR CAA 90 bp CCCACCAGAGGCTCTCGCAGGCCAGTGGTGCGACCTCCTGTCCACAACCGTGAGATCAGCCTCCCCTGTTaGCTGCCAGGCGGCCCCGAG +
Preference number: 5 (lower is better)
Translates to: PTRGSRRPVVRPPVHNREISLPC*LPGGPE
Trigger: CTCGGGGCCGCCTGGCAGCAAACAGGGGAGGCTGAT...CTCACGGTTGTGGACAGGAGGTCGCACCACTGGCCTGCGAGAGCCTCTGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR CAA 90 bp TGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGGGTCCAGCTCCCGCCGGCCTaGCATCTTGGAGCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: WPQVAPPGLSSPEAMPRVQLPPA*HLGAPR
Trigger: CCTGGGGGCTCCAAGATGCAAGGCCGGCGGGAGCTG...GACCCTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CAA 90 bp CAGGGGGCCCATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAATCAGCCTCCCCTGTTaGCTGCCAGGCGGCCCCGAG +
Preference number: 5 (lower is better)
Translates to: QGAHECHLDPDSLSWHPEISLPC*LPGGPE
Trigger: CTCGGGGCCGCCTGGCAGCAAACAGGGGAGGCTGAT...TTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGGCCCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS GCA 90 bp GACATCGGGCAGTGCAGGTGGAACCGCCCTCACGGGGCATGGAGATaGTGGCTTTCCCATCGGACAGGAGAAGGTCGGGGCAGGTCCGTC +
Preference number: 5 (lower is better)
Translates to: DIGQCRWNRPHGAWR*WLSHRTGEGRGRSV
Trigger: GACGGACCTGCCCCGACCTTCTCCTGTCCGATGGGAAAGCCAGCATCTCCATGCCCCGTGAGGGCGGTTCCACCTGCACTGCCCGATGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS CCA 90 bp ATCGGGCAGTGCAGGTGGAACCGCCCTCACGGGGCATGGAGATGCTaGCTTTCCCATCGGACAGGAGAAGGTCGGGGCAGGTCCGTCTCC +
Preference number: 5 (lower is better)
Translates to: IGQCRWNRPHGAWRC*LSHRTGEGRGRSVS
Trigger: GGAGACGGACCTGCCCCGACCTTCTCCTGTCCGATGGGAAAGCCAGCATCTCCATGCCCCGTGAGGGCGGTTCCACCTGCACTGCCCGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS CCA 90 bp GGTCAGGACATCGGGCAGTGCAGGTGGAACCGCCCTCACGGGGCATaGAGATGCTGGCTTTCCCATCGGACAGGAGAAGGTCGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: GQDIGQCRWNRPHGA*RCWLSHRTGEGRGR
Trigger: CCTGCCCCGACCTTCTCCTGTCCGATGGGAAAGCCAGCATCTCCATGCCCCGTGAGGGCGGTTCCACCTGCACTGCCCGATGTCCTGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CAA 90 bp CACCAGGTGCCAGCAGCATTCACATGGGGCAGGGGGCCCATGAGTGCCACCTGGCTCTGGGTCCGCGAGTaGTGCTGCTGGGGACAGAGA +
Preference number: 5 (lower is better)
Translates to: HQVPAAFTWGRGPMSATWLWVRE*CCWGQR
Trigger: TCTCTGTCCCCAGCAGCACAACTCGCGGACCCAGAG...CCAGGTGGCACTCATGGGCCCCCTGCCCCATGTGAATGCTGCTGGCACCTGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS TCA 90 bp GCCCAGTGGCTGACGGTGGAAAGTGCCCACGTGCTGCTGTGGAACTaGCACAAACCACAGGAATGGCCCGGTCGCCCGGGAGTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: AQWLTVESAHVLLWN*HKPQEWPGRPGVLA
Trigger: AGCCAGGACTCCCGGGCGACCGGGCCATTCCTGTGGTTTGTGTCAGTTCCACAGCAGCACGTGGGCACTTTCCACCGTCAGCCACTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS TCA 90 bp ACCATCCAGCCTTCTGTCCCACGAGTGTCCAGCCCCGCCAAGTCCTaGCACCCAGGACTCCCCATGCCTCTGGGTCCGCGAGTTGTGCTG +
Preference number: 5 (lower is better)
Translates to: TIQPSVPRVSSPAKS*HPGLPMPLGPRVVL
Trigger: CAGCACAACTCGCGGACCCAGAGGCATGGGGAGTCCTGGGTGTCAGGACTTGGCGGGGCTGGACACTCGTGGGACAGAAGGCTGGATGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS GCA 90 bp TGCCTCTGGGTCCGCGAGTTGTGCTGCTGGGGACAGAGATGTCAATaGTGCCAGCACAGAGCCCACCCCCACCGTCAGCTTGCTGGGACC +
Preference number: 5 (lower is better)
Translates to: CLWVRELCCWGQRCQ*CQHRAHPHRQLAGT
Trigger: GGTCCCAGCAAGCTGACGGTGGGGGTGGGCTCTGTGCTGGCAGCATTGACATCTCTGTCCCCAGCAGCACAACTCGCGGACCCAGAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS CCA 90 bp ACAGAGGGCACACGGGCCATCTGGGCAATGCTGGTTGCGGCCTTCTaGGCTCCAGGCCTCTGTCCTCAAGCCCCTGTAGAGGGTACCCTG +
Preference number: 5 (lower is better)
Translates to: TEGTRAIWAMLVAAF*APGLCPQAPVEGTL
Trigger: CAGGGTACCCTCTACAGGGGCTTGAGGACAGAGGCCTGGAGCCCAGAAGGCCGCAACCAGCATTGCCCAGATGGCCCGTGTGCCCTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR CAA 90 bp TGTCTCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGACAGCTCCCGCCGGCCTaGCATCTTGGAGCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: CLPLALPRTHPPSPGQTRQLPPA*HLGAPR
Trigger: CCTGGGGGCTCCAAGATGCAAGGCCGGCGGGAGCTG...TCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CAA 90 bp CTGTCTCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGATCAGCCTCCCCTGTTaGCTGCCAGGCGGCCCCGAG +
Preference number: 5 (lower is better)
Translates to: LSPLGSAKDTSSISWSDPISLPC*LPGGPE
Trigger: CTCGGGGCCGCCTGGCAGCAAACAGGGGAGGCTGAT...CGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS CCA 90 bp AAGTGCTGCTGTGTTCCCCAGGGTCAGGACATCGGGCAGTGCAGGTaGAACCGCCCTCACGGGGCATGGAGATGCTGGCTTTCCCATCGG +
Preference number: 5 (lower is better)
Translates to: KCCCVPQGQDIGQCR*NRPHGAWRCWLSHR
Trigger: CCGATGGGAAAGCCAGCATCTCCATGCCCCGTGAGGGCGGTTCCACCTGCACTGCCCGATGTCCTGACCCTGGGGAACACAGCAGCACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CAA 90 bp TTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGGGTGGCGGCCCCGAGAGCTaGGTCTGGATCAGGGCTTTG +
Preference number: 5 (lower is better)
Translates to: LATSCSPWTKQPRSHAQGGGPES*VWIRAL
Trigger: CAAAGCCCTGATCCAGACCAAGCTCTCGGGGCCGCC...ACCCTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CAA 90 bp CAGGGGGCCCATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCCCCACCGTCAGCTaGCTGGGACCACATTCTCCA +
Preference number: 5 (lower is better)
Translates to: QGAHECHLDPDSLSWHPETPTVS*LGPHSP
Trigger: TGGAGAATGTGGTCCCAGCAAGCTGACGGTGGGGGT...TTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGGCCCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR CAA 90 bp TGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCCCCGGGAGGCGGAGGTaGCAGGGAGCGGAGATCGCG +
Preference number: 5 (lower is better)
Translates to: WGLENSSTDSSGFHINPAPGRRR*QGAEIA
Trigger: CGCGATCTCCGCTCCCTGCAACCTCCGCCTCCCGGG...GGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR CAA 90 bp GATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGTGGGGCAGGTGCTGGTaGGACCCCAGCAGAGGACAC +
Preference number: 5 (lower is better)
Translates to: DLATSCSPWTKQPRSHAQWGRCW*DPSRGH
Trigger: GTGTCCTCTGCTGGGGTCCAACCAGCACCTGCCCCA...CTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS GCA 90 bp ACACCCCAACCCACCTCCCGTGCCCCCTCTATGCCTCACAGCACCTaGCCTGGAGTAGCTGACTTACTGCCGTTACTGTCTCCTCCAAGG +
Preference number: 5 (lower is better)
Translates to: TPQPTSRAPSMPHST*PGVADLLPLLSPPR
Trigger: CCTTGGAGGAGACAGTAACGGCAGTAAGTCAGCTACTCCAGGGCAGGTGCTGTGAGGCATAGAGGGGGCACGGGAGGTGGGTTGGGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS CCA 90 bp TCATGCTTTGCAGAAGCACCACACACAGAGGGCACACGGGCCATCTaGGCAATGCTGGTTGCGGCCTTCTGGGCTCCAGGCCTCTGTCCT +
Preference number: 5 (lower is better)
Translates to: SCFAEAPHTEGTRAI*AMLVAAFWAPGLCP
Trigger: AGGACAGAGGCCTGGAGCCCAGAAGGCCGCAACCAGCATTGCCCAGATGGCCCGTGTGCCCTCTGTGTGTGGTGCTTCTGCAAAGCATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR CAA 90 bp CTGAGCGGTCTCAACAGCTGTCTCTCTGGTGACGTTTCAGTGCCTTCCCCTTTTCAGCTCCCGCCGGCCTaGCATCTTGGAGCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: LSGLNSCLSGDVSVPSPFQLPPA*HLGAPR
Trigger: CCTGGGGGCTCCAAGATGCAAGGCCGGCGGGAGCTG...AAAAGGGGAAGGCACTGAAACGTCACCAGAGAGACAGCTGTTGAGACCGCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CAA 90 bp CACCAGGTGCCAGCAGCATTCACATGGGGCAGGGGGCCCATGAGTGCCACCTGGGAGAACTGCACTCTTTaGGGGCAGAAGTGGTTCTCG +
Preference number: 5 (lower is better)
Translates to: HQVPAAFTWGRGPMSATWENCTL*GQKWFS
Trigger: CGAGAACCACTTCTGCCCCAAAAGAGTGCAGTTCTC...CCAGGTGGCACTCATGGGCCCCCTGCCCCATGTGAATGCTGCTGGCACCTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CAA 90 bp GGGCCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCGGCGGCCCCGAGAGCTaGGTCTGGATCAGGGCTTTG +
Preference number: 5 (lower is better)
Translates to: GPGVWKTAPQTALVSTSTGGPES*VWIRAL
Trigger: CAAAGCCCTGATCCAGACCAAGCTCTCGGGGCCGCC...GGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CAA 90 bp CAGGGGGCCCATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACAGGACAGGTCCTGTaGGAGAGATCCCAGGAATGG +
Preference number: 5 (lower is better)
Translates to: QGAHECHLDPDSLSWHPETGQVL*ERSQEW
Trigger: CCATTCCTGGGATCTCTCCAACAGGACCTGTCCTGT...TTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGGCCCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS GCA 90 bp GCAGGTCCGTCTCCATTCCAAACTGTCATCACTCAGCCTCTCAGGTaGCACTCGGAGGGAAGCGCTGGCTGCTTCCTCCTGGAGGTCACT +
Preference number: 5 (lower is better)
Translates to: AGPSPFQTVITQPLR*HSEGSAGCFLLEVT
Trigger: AGTGACCTCCAGGAGGAAGCAGCCAGCGCTTCCCTCCGAGTGGCACCTGAGAGGCTGAGTGATGACAGTTTGGAATGGAGACGGACCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CAA 90 bp CTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCGGCGGCCCCGAGAGCTaGGTCTGGATCAGGGCTTTG +
Preference number: 5 (lower is better)
Translates to: LGSGKQLHRQLWFPHQPSGGPES*VWIRAL
Trigger: CAAAGCCCTGATCCAGACCAAGCTCTCGGGGCCGCC...GCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CAA 90 bp AGCCACGGGCCCACCAGAGGCTCTCGCAGGCCAGTGGTGCGACCTCCTGTCCACTTAAAGAGTGTCAGTTaGAGCTTGCGTGGAGTGAAC +
Preference number: 5 (lower is better)
Translates to: SHGPTRGSRRPVVRPPVHLKSVS*SLRGVN
Trigger: GTTCACTCCACGCAAGCTCAAACTGACACTCTTTAA...GTGGACAGGAGGTCGCACCACTGGCCTGCGAGAGCCTCTGGTGGGCCCGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR CAA 90 bp CCCACCAGAGGCTCTCGCAGGCCAGTGGTGCGACCTCCTGTCCACAACCGTGAGGAGAATTGTCCAGACTaGGCTGAAGATTCCCGAAAG +
Preference number: 5 (lower is better)
Translates to: PTRGSRRPVVRPPVHNREENCPD*AEDSRK
Trigger: CTTTCGGGAATCTTCAGCCAAGTCTGGACAATTCTC...CTCACGGTTGTGGACAGGAGGTCGCACCACTGGCCTGCGAGAGCCTCTGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000547315.6
CDS-3UTR CAA 90 bp GCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCCATGCCCAGGGTCCAGTCTGGATCAGGGCTTaGCAATGCTGGAGACAGAAG +
Preference number: 5 (lower is better)
Translates to: ATSCSPWTKQPRSHAQGPVWIRA*QCWRQK
Trigger: CTTCTGTCTCCAGCATTGCAAAGCCCTGATCCAGAC...TGGACCCTGGGCATGGCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CAA 90 bp AGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCTGGTGACGTTTCAGTGCCTGGCGGCCCCGAGAGCTaGGTCTGGATCAGGGCTTTG +
Preference number: 5 (lower is better)
Translates to: RGFLSGLNSCLSGDVSVPGGPES*VWIRAL
Trigger: CAAAGCCCTGATCCAGACCAAGCTCTCGGGGCCGCC...AGGCACTGAAACGTCACCAGAGAGACAGCTGTTGAGACCGCTCAGAAACCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR CAA 90 bp GGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAAGAAATCAGCCTCCCCTGTTaGCTGCCAGGCGGCCCCGAG +
Preference number: 5 (lower is better)
Translates to: GKQLHRQLWFPHQPSQEEISLPC*LPGGPE
Trigger: CTCGGGGCCGCCTGGCAGCAAACAGGGGAGGCTGAT...TTCTTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CAA 90 bp TGGTGCGACCTCCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGACAGGACAGGTCCTGTaGGAGAGATCCCAGGAATGG +
Preference number: 5 (lower is better)
Translates to: WCDLLSTTVRDKGLSLRLTGQVL*ERSQEW
Trigger: CCATTCCTGGGATCTCTCCAACAGGACCTGTCCTGT...CAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGGAGGTCGCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000550614.5
CDS-3UTR CAA 90 bp GTCTCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAGACAGGACAGGTCCTGTaGGAGAGATCCCAGGAATGG +
Preference number: 5 (lower is better)
Translates to: VSPWLCQGHILHLLVRPETGQVL*ERSQEW
Trigger: CCATTCCTGGGATCTCTCCAACAGGACCTGTCCTGT...CTCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CAA 90 bp TGGGCCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACTCTGGGCAATGCTGGTaGCGGCCTTCTGGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: WAWGLENSSTDSSGFHINSGQCW*RPSGLQ
Trigger: CTGGAGCCCAGAAGGCCGCAACCAGCATTGCCCAGA...GTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS TCA 90 bp ACGGCAGAAGTTCCTGTCACCCAAGGTCCACCCTGGCATGGTTGGTaGGAACTGCACTCTTTTGGGGCAGAAGTGGTTCTCGGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: TAEVPVTQGPPWHGW*ELHSFGAEVVLGGW
Trigger: CCAGCCACCGAGAACCACTTCTGCCCCAAAAGAGTGCAGTTCTCACCAACCATGCCAGGGTGGACCTTGGGTGACAGGAACTTCTGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549584.5
CDS TCA 90 bp ACAGCTGGAGCGCCAATCGTGCTGCCCCTTCTCATAGGACCCCTATaGCCCACAGATGGCAGGGACCTCAGGAGAGATGCTACTCTCCAT +
Preference number: 5 (lower is better)
Translates to: TAGAPIVLPLLIGPL*PTDGRDLRRDATLH
Trigger: ATGGAGAGTAGCATCTCTCCTGAGGTCCCTGCCATCTGTGGGTCATAGGGGTCCTATGAGAAGGGGCAGCACGATTGGCGCTCCAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550614.5
CDS CCA 90 bp AGGTGGGACGGCAGAAGTTCCTGTCACCCAAGGTCCACCCTGGCATaGTTGGTGAGAACTGCACTCTTTTGGGGCAGAAGTGGTTCTCGG +
Preference number: 5 (lower is better)
Translates to: RWDGRSSCHPRSTLA*LVRTALFWGRSGSR
Trigger: CCGAGAACCACTTCTGCCCCAAAAGAGTGCAGTTCTCACCAACCATGCCAGGGTGGACCTTGGGTGACAGGAACTTCTGCCGTCCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549584.5
CDS CCA 90 bp GCTGACAATGGGGCTCCAGAGTGTGGAACGTTTTCTAGAACTCTGTaGCTGAGAACCATGAGGCAGCCGGTGCCCACTCAGCCAAGTCCC +
Preference number: 5 (lower is better)
Translates to: ADNGAPECGTFSRTL*LRTMRQPVPTQPSP
Trigger: GGGACTTGGCTGAGTGGGCACCGGCTGCCTCATGGTTCTCAGCCACAGAGTTCTAGAAAACGTTCCACACTCTGGAGCCCCATTGTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550614.5
CDS-3UTR CAA 90 bp GGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAAGAAGGCGGCCCCGAGAGCTaGGTCTGGATCAGGGCTTTG +
Preference number: 5 (lower is better)
Translates to: GKQLHRQLWFPHQPSQEEGGPES*VWIRAL
Trigger: CAAAGCCCTGATCCAGACCAAGCTCTCGGGGCCGCC...TTCTTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CAA 90 bp GAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAAGAAAATCAGCCTCCCCTGTTaGCTGCCAGGCGGCCCCGAG +
Preference number: 5 (lower is better)
Translates to: ENSSTDSSGFHINPARKKISLPC*LPGGPE
Trigger: CTCGGGGCCGCCTGGCAGCAAACAGGGGAGGCTGAT...TTTCTTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CAA 90 bp GCCCATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTTCTGAACTCATGGATTaGGCCACAAGTTGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: AHECHLDPDSLSWHPETSSELMD*ATSCSP
Trigger: GGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAGA...AGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS GCA 90 bp CAGCTTGCTGGGACCACATTCTCCACAGTTTTTCCCCAGGGATCATaGTTTGCAGAAGCACCACACACAGAGGGCACACGGGCCATCTGG +
Preference number: 5 (lower is better)
Translates to: QLAGTTFSTVFPQGS*FAEAPHTEGTRAIW
Trigger: CCAGATGGCCCGTGTGCCCTCTGTGTGTGGTGCTTCTGCAAAGCATGATCCCTGGGGAAAAACTGTGGAGAATGTGGTCCCAGCAAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR CAA 90 bp AGGCGGCCCCGAGAGCTTGGTCTGGATCAGGGCTTTGCAATGCTGGAGACAGAATCCACCCTGGCATGGTaGGTGAGAACTGCACTCTTT +
Preference number: 5 (lower is better)
Translates to: RRPRELGLDQGFAMLETESTLAW*VRTALF
Trigger: AAAGAGTGCAGTTCTCACCAACCATGCCAGGGTGGA...TTCTGTCTCCAGCATTGCAAAGCCCTGATCCAGACCAAGCTCTCGGGGCCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR CAA 90 bp CAGGGGGCCCATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAATTAAAGAGTGTCAGTTaGAGCTTGCGTGGAGTGAAC +
Preference number: 5 (lower is better)
Translates to: QGAHECHLDPDSLSWHPELKSVS*SLRGVN
Trigger: GTTCACTCCACGCAAGCTCAAACTGACACTCTTTAA...TTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATGGGCCCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CAA 90 bp GGCCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCACAGGACAGGTCCTGTaGGAGAGATCCCAGGAATGG +
Preference number: 5 (lower is better)
Translates to: GLGSGKQLHRQLWFPHQPTGQVL*ERSQEW
Trigger: CCATTCCTGGGATCTCTCCAACAGGACCTGTCCTGT...GGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CAA 90 bp CATGAGTGCCACCTGGACCCCGACAGCCTGTCATGGCATCCAGAAACCTCTGTCTCTGAACTCATGGATTaGGCCACAAGTTGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: HECHLDPDSLSWHPETSVSELMD*ATSCSP
Trigger: GGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAGA...GACAGAGGTTTCTGGATGCCATGACAGGCTGTCGGGGTCCAGGTGGCACTCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS GCA 90 bp TGCTGGGACCACATTCTCCACAGTTTTTCCCCAGGGATCATGCTTTaGAGAAGCACCACACACAGAGGGCACACGGGCCATCTGGGCAAT +
Preference number: 5 (lower is better)
Translates to: CWDHILHSFSPGIML*RSTTHRGHTGHLGN
Trigger: ATTGCCCAGATGGCCCGTGTGCCCTCTGTGTGTGGTGCTTCTGCAAAGCATGATCCCTGGGGAAAAACTGTGGAGAATGTGGTCCCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS GCA 90 bp GTCACGTTCCTTCAGGGCCTCTTGGTCTGGATCAGGGCTTTGCAATaGTGGAGACAGAAGCTGCTGACAGTGAGGAGTCCTTCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: VTFLQGLLVWIRALQ*WRQKLLTVRSPSGS
Trigger: AGAGCCTGAAGGACTCCTCACTGTCAGCAGCTTCTGTCTCCAGCATTGCAAAGCCCTGATCCAGACCAAGAGGCCCTGAAGGAACGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549584.5
CDS-3UTR CAA 90 bp CTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCAGAACAGTCTGGATCAGGGCTTaGCAATGCTGGAGACAGAAG +
Preference number: 5 (lower is better)
Translates to: LPRTHPPSPGQTRDKPRTVWIRA*QCWRQK
Trigger: CTTCTGTCTCCAGCATTGCAAAGCCCTGATCCAGAC...TGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CAA 90 bp CACACAGCAGCCAGGGCAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAAGTCTGGATCAGGGCTTaGCAATGCTGGAGACAGAAG +
Preference number: 5 (lower is better)
Translates to: HTAARAECDRQRVSERSQVWIRA*QCWRQK
Trigger: CTTCTGTCTCCAGCATTGCAAAGCCCTGATCCAGAC...TTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTGCCCTGGCTGCTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR CAA 90 bp GCCAGGGCAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTTCTGAACTCATGGATTaGGCCACAAGTTGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: ARAECDRQRVSERSQQLSSELMD*ATSCSP
Trigger: GGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAGA...AGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTGCCCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR CAA 90 bp CACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCAGAACACAGGACAGGTTCTGAACTCATGGATTaGGCCACAAGTTGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: HILHLLVRPETSPEHRTGSELMD*ATSCSP
Trigger: GGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAGA...ACCTGTCCTGTGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS TCA 90 bp TGCGGCCTAATCCACTCGAGCGCTGTCTGTCTTTCAATGCTCAGTTaGAAGTGTGTCCCTGGAAAATGGCCATCTGCGAGTGACTGCGGG +
Preference number: 5 (lower is better)
Translates to: CGLIHSSAVCLSMLS*KCVPGKWPSASDCG
Trigger: CCCGCAGTCACTCGCAGATGGCCATTTTCCAGGGACACACTTTCAACTGAGCATTGAAAGACAGACAGCGCTCGAGTGGATTAGGCCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550614.5
CDS GCA 90 bp GCTGCTCTGTTAGACTGGTGCTTGGTCTGGATCAGGGCTTTGCAATaGTGGAGACAGAAGCTGCTGACAGTGAGGAGTCCTTCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: AALLDWCLVWIRALQ*WRQKLLTVRSPSGS
Trigger: AGAGCCTGAAGGACTCCTCACTGTCAGCAGCTTCTGTCTCCAGCATTGCAAAGCCCTGATCCAGACCAAGCACCAGTCTAACAGAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548178.1
CDS GCA 90 bp AAGGCCATGTCCCTGGCCTCTGATGTGGCTGACGGCTCAGTTATCTaGTTGGAGAGAGCTCCACGTCCACTAGAAAGAATGAGGGCTTTG +
Preference number: 5 (lower is better)
Translates to: KAMSLASDVADGSVI*LERAPRPLERMRAL
Trigger: CAAAGCCCTCATTCTTTCTAGTGGACGTGGAGCTCTCTCCAAGCAGATAACTGAGCCGTCAGCCACATCAGAGGCCAGGGACATGGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549584.5
CDS GCA 90 bp GCAGCTGGGTCCTTGGGCATCTTGTCAGCATCTCTGTGGGATCACTaGAGACATTTCTCCAGCATAGAGGCTTCAGGGTGGCCAGGTTTT +
Preference number: 5 (lower is better)
Translates to: AAGSLGILSASLWDH*RHFSSIEASGWPGF
Trigger: AAAACCTGGCCACCCTGAAGCCTCTATGCTGGAGAAATGTCTGCAGTGATCCCACAGAGATGCTGACAAGATGCCCAAGGACCCAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549584.5
CDS CCA 90 bp ACGTTCCTTCAGGGCCTCTTGGTCTGGATCAGGGCTTTGCAATGCTaGAGACAGAAGCTGCTGACAGTGAGGAGTCCTTCAGGCTCTTTG +
Preference number: 5 (lower is better)
Translates to: TFLQGLLVWIRALQC*RQKLLTVRSPSGSL
Trigger: CAAAGAGCCTGAAGGACTCCTCACTGTCAGCAGCTTCTGTCTCCAGCATTGCAAAGCCCTGATCCAGACCAAGAGGCCCTGAAGGAACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549584.5
CDS CCA 90 bp AAAGCTCCAGCAGCTGGGTCCTTGGGCATCTTGTCAGCATCTCTGTaGGATCACTGCAGACATTTCTCCAGCATAGAGGCTTCAGGGTGG +
Preference number: 5 (lower is better)
Translates to: KAPAAGSLGILSASL*DHCRHFSSIEASGW
Trigger: CCACCCTGAAGCCTCTATGCTGGAGAAATGTCTGCAGTGATCCCACAGAGATGCTGACAAGATGCCCAAGGACCCAGCTGCTGGAGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549584.5
CDS-3UTR CAA 90 bp GAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGCGAGAACTGCACTCTTTaGGGGCAGAAGTGGTTCTCG +
Preference number: 5 (lower is better)
Translates to: ELMDLATSCSPWTKQPRSENCTL*GQKWFS
Trigger: CGAGAACCACTTCTGCCCCAAAAGAGTGCAGTTCTC...GCTTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CAA 90 bp TGGGCCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACTCCACCCTGGCATGGTaGGTGAGAACTGCACTCTTT +
Preference number: 5 (lower is better)
Translates to: WAWGLENSSTDSSGFHINSTLAW*VRTALF
Trigger: AAAGAGTGCAGTTCTCACCAACCATGCCAGGGTGGA...GTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CAA 90 bp TCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGTCCTTCAGGCTCTTaGAGGTCACAATCTTCCATG +
Preference number: 5 (lower is better)
Translates to: SPWLCQGHILHLLVRPETSPSGS*RSQSSM
Trigger: CATGGAAGATTGTGACCTCAAAGAGCCTGAAGGACT...TGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CAA 90 bp CTCTGTCTCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCAGTCCTTCAGGCTCTTaGAGGTCACAATCTTCCATG +
Preference number: 5 (lower is better)
Translates to: LCLPLALPRTHPPSPGQTSPSGS*RSQSSM
Trigger: CATGGAAGATTGTGACCTCAAAGAGCCTGAAGGACT...GGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CAA 90 bp CCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGAGTCCTTCAGGCTCTTaGAGGTCACAATCTTCCATG +
Preference number: 5 (lower is better)
Translates to: PLALPRTHPPSPGQTRDKSPSGS*RSQSSM
Trigger: CATGGAAGATTGTGACCTCAAAGAGCCTGAAGGACT...CTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CAA 90 bp CTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCGTCTGGATCAGGGCTTaGCAATGCTGGAGACAGAAG +
Preference number: 5 (lower is better)
Translates to: LGSGKQLHRQLWFPHQPSVWIRA*QCWRQK
Trigger: CTTCTGTCTCCAGCATTGCAAAGCCCTGATCCAGAC...GCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CAA 90 bp CCTCCAGAAAGGTTCTTCTGCGCAGCATCTATTCCGAGAACAAGAAAGAAGTTCGGCGGCCCCGAGAGCTaGGTCTGGATCAGGGCTTTG +
Preference number: 5 (lower is better)
Translates to: PPERFFCAASIPRTRKKFGGPES*VWIRAL
Trigger: CAAAGCCCTGATCCAGACCAAGCTCTCGGGGCCGCC...GAACTTCTTTCTTGTTCTCGGAATAGATGCTGCGCAGAAGAACCTTTCTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS CCA 90 bp GCTCTGTTAGACTGGTGCTTGGTCTGGATCAGGGCTTTGCAATGCTaGAGACAGAAGCTGCTGACAGTGAGGAGTCCTTCAGGCTCTTTG +
Preference number: 5 (lower is better)
Translates to: ALLDWCLVWIRALQC*RQKLLTVRSPSGSL
Trigger: CAAAGAGCCTGAAGGACTCCTCACTGTCAGCAGCTTCTGTCTCCAGCATTGCAAAGCCCTGATCCAGACCAAGCACCAGTCTAACAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548178.1
CDS-3UTR CAA 90 bp CACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCAGAACACAGGACAGGTGAGAATTGTCCAGACTaGGCTGAAGATTCCCGAAAG +
Preference number: 5 (lower is better)
Translates to: HILHLLVRPETSPEHRTGENCPD*AEDSRK
Trigger: CTTTCGGGAATCTTCAGCCAAGTCTGGACAATTCTC...ACCTGTCCTGTGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CAA 90 bp GGCCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGTCCTTCAGGCTCTTaGAGGTCACAATCTTCCATG +
Preference number: 5 (lower is better)
Translates to: GLGSGKQLHRQLWFPHQPSPSGS*RSQSSM
Trigger: CATGGAAGATTGTGACCTCAAAGAGCCTGAAGGACT...GGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CAA 90 bp CTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGCCCAGAAGTCTGGATCAGGGCTTaGCAATGCTGGAGACAGAAG +
Preference number: 5 (lower is better)
Translates to: LNSWIWPQVAPPGLSSPEVWIRA*QCWRQK
Trigger: CTTCTGTCTCCAGCATTGCAAAGCCCTGATCCAGAC...TTCTGGGCTGCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CAA 90 bp CACACAGCAGCCAGGGCAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAAAGTGTCAGTTTGAGCTaGCGTGGAGTGAACATCCTT +
Preference number: 5 (lower is better)
Translates to: HTAARAECDRQRVSERSQSVSLS*RGVNIL
Trigger: AAGGATGTTCACTCCACGCAAGCTCAAACTGACACT...TTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTGCCCTGGCTGCTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR CAA 90 bp CACATCCTCCATCTCCTGGTCAGACCCGAGACAAGCCCAGAACACAGGACAGGTAGTGTCAGTTTGAGCTaGCGTGGAGTGAACATCCTT +
Preference number: 5 (lower is better)
Translates to: HILHLLVRPETSPEHRTGSVSLS*RGVNIL
Trigger: AAGGATGTTCACTCCACGCAAGCTCAAACTGACACT...ACCTGTCCTGTGTTCTGGGCTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CAA 90 bp GGGCCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCAGTGTCAGTTTGAGCTaGCGTGGAGTGAACATCCTT +
Preference number: 5 (lower is better)
Translates to: GPGVWKTAPQTALVSTSTSVSLS*RGVNIL
Trigger: AAGGATGTTCACTCCACGCAAGCTCAAACTGACACT...GGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CAA 90 bp CTCTGTCTCCCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCTTAAAGAGTGTCAGTTaGAGCTTGCGTGGAGTGAAC +
Preference number: 5 (lower is better)
Translates to: LCLPLALPRTHPPSPGQTLKSVS*SLRGVN
Trigger: GTTCACTCCACGCAAGCTCAAACTGACACTCTTTAA...GGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGGGAGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CAA 90 bp CCTTTTCCTCTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCTCCACCCTGGCATGGTaGGTGAGAACTGCACTCTTT +
Preference number: 5 (lower is better)
Translates to: PFPLNSWIWPQVAPPGLSSTLAW*VRTALF
Trigger: AAAGAGTGCAGTTCTCACCAACCATGCCAGGGTGGA...GCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAGAGGAAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS-3UTR CAA 90 bp GTGCGACCTCCTGTCCACAACCGTGAGGGACAAAGGCCTGTCCTTGAGGCTGCTTCTTTCAATGCTCAGTaGAAAGTGTGTCCCACAATT +
Preference number: 5 (lower is better)
Translates to: VRPPVHNREGQRPVLEAASFNAQ*KVCPTI
Trigger: AATTGTGGGACACACTTTCAACTGAGCATTGAAAGA...AGCAGCCTCAAGGACAGGCCTTTGTCCCTCACGGTTGTGGACAGGAGGTCGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389964.7
CDS-3UTR CAA 90 bp GCAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCTGGAGTCCTTCAGGCTCTTaGAGGTCACAATCTTCCATG +
Preference number: 5 (lower is better)
Translates to: AECDRQRVSERSQQLSLWSPSGS*RSQSSM
Trigger: CATGGAAGATTGTGACCTCAAAGAGCCTGAAGGACT...CCAGAGAGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR CAA 90 bp CCTGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGAGTGTCAGTTTGAGCTaGCGTGGAGTGAACATCCTT +
Preference number: 5 (lower is better)
Translates to: PGVWKTAPQTALVSTSTQSVSLS*RGVNIL
Trigger: AAGGATGTTCACTCCACGCAAGCTCAAACTGACACT...CTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CAA 90 bp TGGGGTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCTTAAAGAGTGTCAGTTaGAGCTTGCGTGGAGTGAAC +
Preference number: 5 (lower is better)
Translates to: WGLENSSTDSSGFHINPALKSVS*SLRGVN
Trigger: GTTCACTCCACGCAAGCTCAAACTGACACTCTTTAA...GGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CAA 90 bp CCCTTGGCTCTGCCAAGGACACATCCTCCATCTCCTGGTCAGACCCGAGACAAGGTGAGACCAGATATTTaGCTGGTTTTGTTCACTCAA +
Preference number: 5 (lower is better)
Translates to: PLALPRTHPPSPGQTRDKVRPDI*LVLFTQ
Trigger: TTGAGTGAACAAAACCAGCAAAATATCTGGTCTCAC...CTTGTCTCGGGTCTGACCAGGAGATGGAGGATGTGTCCTTGGCAGAGCCAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS-3UTR CAA 90 bp GGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAAGAAAGTCCTTCAGGCTCTTaGAGGTCACAATCTTCCATG +
Preference number: 5 (lower is better)
Translates to: GKQLHRQLWFPHQPSQEESPSGS*RSQSSM
Trigger: CATGGAAGATTGTGACCTCAAAGAGCCTGAAGGACT...TTCTTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CAA 90 bp GTTCTTCTGCGCAGCATCTATTCCGAGAACAAGAAAGAAGTTCTCCTGGCAACGGTCTGGATCAGGGCTTaGCAATGCTGGAGACAGAAG +
Preference number: 5 (lower is better)
Translates to: VLLRSIYSENKKEVLLATVWIRA*QCWRQK
Trigger: CTTCTGTCTCCAGCATTGCAAAGCCCTGATCCAGAC...CGTTGCCAGGAGAACTTCTTTCTTGTTCTCGGAATAGATGCTGCGCAGAAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR CAA 90 bp GAAAAATTCCTCATAAAGGTACAAAGTCCTCCTGATTTTAGCAAACGTCGCTATATCAGCCTCCCCTGTTaGCTGCCAGGCGGCCCCGAG +
Preference number: 5 (lower is better)
Translates to: EKFLIKVQSPPDFSKRRYISLPC*LPGGPE
Trigger: CTCGGGGCCGCCTGGCAGCAAACAGGGGAGGCTGAT...ATAGCGACGTTTGCTAAAATCAGGAGGACTTTGTACCTTTATGAGGAATTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR CAA 90 bp CCTTTTCCTCTGAACTCATGGATTTGGCCACAAGTTGCTCCCCCTGGACTAAGCAGTGTCAGTTTGAGCTaGCGTGGAGTGAACATCCTT +
Preference number: 5 (lower is better)
Translates to: PFPLNSWIWPQVAPPGLSSVSLS*RGVNIL
Trigger: AAGGATGTTCACTCCACGCAAGCTCAAACTGACACT...GCTTAGTCCAGGGGGAGCAACTTGTGGCCAAATCCATGAGTTCAGAGGAAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CAA 90 bp CTGAGCGGTCTCAACAGCTGTCTCTCTGGTGACGTTTCAGTGCCTTCCCCTTTTTTAAAGAGTGTCAGTTaGAGCTTGCGTGGAGTGAAC +
Preference number: 5 (lower is better)
Translates to: LSGLNSCLSGDVSVPSPFLKSVS*SLRGVN
Trigger: GTTCACTCCACGCAAGCTCAAACTGACACTCTTTAA...AAAAGGGGAAGGCACTGAAACGTCACCAGAGAGACAGCTGTTGAGACCGCTCAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
CDS-3UTR CAA 90 bp CAGAGTGTGACAGACAGAGGGTTTCTGAGCGGTCTCAACAGCTGTCTCTCTGGTTTAAAGAGTGTCAGTTaGAGCTTGCGTGGAGTGAAC +
Preference number: 5 (lower is better)
Translates to: QSVTDRGFLSGLNSCLSGLKSVS*SLRGVN
Trigger: GTTCACTCCACGCAAGCTCAAACTGACACTCTTTAA...ACCAGAGAGACAGCTGTTGAGACCGCTCAGAAACCCTCTGTCTGTCACACTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000550614.5
CDS-3UTR CAA 90 bp AAAGGTTCTTCTGCGCAGCATCTATTCCGAGAACAAGAAAGAAGTTCTCCTGGCACAGGACAGGTCCTGTaGGAGAGATCCCAGGAATGG +
Preference number: 5 (lower is better)
Translates to: KGSSAQHLFREQERSSPGTGQVL*ERSQEW
Trigger: CCATTCCTGGGATCTCTCCAACAGGACCTGTCCTGT...GCCAGGAGAACTTCTTTCTTGTTCTCGGAATAGATGCTGCGCAGAAGAACCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR CAA 90 bp CCTCCAGAAAGGTTCTTCTGCGCAGCATCTATTCCGAGAACAAGAAAGAAGTTCGAGAACTGCACTCTTTaGGGGCAGAAGTGGTTCTCG +
Preference number: 5 (lower is better)
Translates to: PPERFFCAASIPRTRKKFENCTL*GQKWFS
Trigger: CGAGAACCACTTCTGCCCCAAAAGAGTGCAGTTCTC...GAACTTCTTTCTTGTTCTCGGAATAGATGCTGCGCAGAAGAACCTTTCTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000548641.5
CDS-3UTR CAA 90 bp GAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAAGAAAAGTGTCAGTTTGAGCTaGCGTGGAGTGAACATCCTT +
Preference number: 5 (lower is better)
Translates to: ENSSTDSSGFHINPARKKSVSLS*RGVNIL
Trigger: AAGGATGTTCACTCCACGCAAGCTCAAACTGACACT...TTTCTTCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549240.1
ENST00000550614.5
ENST00000551606.5
CDS-3UTR CAA 90 bp GTCTGGAAAACAGCTCCACAGACAGCTCTGGTTTCCACATCAACCCAGCCAGGAGATATTTTGCTGGTTTaGTTCACTCAAGTGCCTAGA +
Preference number: 5 (lower is better)
Translates to: VWKTAPQTALVSTSTQPGDILLV*FTQVPR
Trigger: TCTAGGCACTTGAGTGAACAAAACCAGCAAAATATC...TCCTGGCTGGGTTGATGTGGAAACCAGAGCTGTCTGTGGAGCTGTTTTCCAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS CCA 90 bp CAACGCCAGGTTTTTCTTCACTGCTTATTTCTAGGAAATGGTCTATaGTGGAAACGTCTTCAGCTGCCTGCTGGACTGTTATTTCTTGAA +
Preference number: 5 (lower is better)
Translates to: QRQVFLHCLFLGNGL*WKRLQLPAGLLFLE
Trigger: TTCAAGAAATAACAGTCCAGCAGGCAGCTGAAGACGTTTCCACCATAGACCATTTCCTAGAAATAAGCAGTGAAGAAAAACCTGGCGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549584.5
ENST00000550614.5
ENST00000551046.5
ENST00000551606.5
CDS GCA 90 bp TGTCCCACAATTTATGTACACGTTCAACGCCAGGTTTTTCTTCACTaGTTATTTCTAGGAAATGGTCTATGGTGGAAACGTCTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: CPTIYVHVQRQVFLH*LFLGNGLWWKRLQL
Trigger: CAGCTGAAGACGTTTCCACCATAGACCATTTCCTAGAAATAAGCAGTGAAGAAAAACCTGGCGTTGAACGTGTACATAAATTGTGGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000551046.5
CDS GCA 90 bp GAGTTTTCTGGATTCGTTAACGTTCAACGCCAGGTTTTTCTTCACTaGTTATTTCTAGGAAATGGTCTATGGTGGAAACGTCTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: EFSGFVNVQRQVFLH*LFLGNGLWWKRLQL
Trigger: CAGCTGAAGACGTTTCCACCATAGACCATTTCCTAGAAATAAGCAGTGAAGAAAAACCTGGCGTTGAACGTTAACGAATCCAGAAAACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548641.5
CDS GCA 90 bp CGTTACACAATTTATGTACACGTTCAACGCCAGGTTTTTCTTCACTaGTTATTTCTAGGAAATGGTCTATGGTGGAAACGTCTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: RYTIYVHVQRQVFLH*LFLGNGLWWKRLQL
Trigger: CAGCTGAAGACGTTTCCACCATAGACCATTTCCTAGAAATAAGCAGTGAAGAAAAACCTGGCGTTGAACGTGTACATAAATTGTGTAACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000547315.6
ENST00000549584.5
ENST00000551606.5
CDS GCA 90 bp ATTACCACAATTTATGTACACGTTCAACGCCAGGTTTTTCTTCACTaGTTATTTCTAGGAAATGGTCTATGGTGGAAACGTCTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: ITTIYVHVQRQVFLH*LFLGNGLWWKRLQL
Trigger: CAGCTGAAGACGTTTCCACCATAGACCATTTCCTAGAAATAAGCAGTGAAGAAAAACCTGGCGTTGAACGTGTACATAAATTGTGGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550614.5
CDS CCA 72 bp GAGGAGCGAGAGCCGGGCGCCCGCGGGAGTCCCAAGTaGGAAGGAGTGGGTGCGGCGCCCCGGGGCCTCCCG +
Preference number: 6 (lower is better)
Translates to: EEREPGARGSPK*EGVGAAPRGLP
Trigger: CGGGAGGCCCCGGGGCGCCGCACCCACTCCTTCCCACTTGGGACTCCCGCGGGCGCCCGGCTCTCGCTCCTC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS GCA 72 bp GGGCGCCCGCGGGAGTCCCAAGTGGGAAGGAGTGGGTaGGGCGCCCCGGGGCCTCCCGAGAGTCCCTCTCGC +
Preference number: 6 (lower is better)
Translates to: GRPRESQVGRSG*GAPGPPESPSR
Trigger: GCGAGAGGGACTCTCGGGAGGCCCCGGGGCGCCGCACCCACTCCTTCCCACTTGGGACTCCCGCGGGCGCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS CCA 72 bp AGCCGGGCGCCCGCGGGAGTCCCAAGTGGGAAGGAGTaGGTGCGGCGCCCCGGGGCCTCCCGAGAGTCCCTC +
Preference number: 6 (lower is better)
Translates to: SRAPAGVPSGKE*VRRPGASRESL
Trigger: GAGGGACTCTCGGGAGGCCCCGGGGCGCCGCACCCACTCCTTCCCACTTGGGACTCCCGCGGGCGCCCGGCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS CCA 72 bp GGCCTGGACAGGGCCCGAGGTGGCCGGCTAAGCGCCTaGCCCACGGCTCCCGAGAGTCCCCGCACCCACCTT +
Preference number: 6 (lower is better)
Translates to: GLDRARGGRLSA*PTAPESPRTHL
Trigger: AAGGTGGGTGCGGGGACTCTCGGGAGCCGTGGGCCAGGCGCTTAGCCGGCCACCTCGGGCCCTGTCCAGGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS CCA 72 bp AGCCCTGGAACGCCTGGGCCTGGACAGGGCCCGAGGTaGCCGGCTAAGCGCCTGGCCCACGGCTCCCGAGAG +
Preference number: 6 (lower is better)
Translates to: SPGTPGPGQGPR*PAKRLAHGSRE
Trigger: CTCTCGGGAGCCGTGGGCCAGGCGCTTAGCCGGCCACCTCGGGCCCTGTCCAGGCCCAGGCGTTCCAGGGCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS CCA 72 bp GAGAGTCCCTCTCGCACGCGGCCCGCAGAGCAGCCCTaGAACGCCTGGGCCTGGACAGGGCCCGAGGTGGCC +
Preference number: 6 (lower is better)
Translates to: ESPSRTRPAEQP*NAWAWTGPEVA
Trigger: GGCCACCTCGGGCCCTGTCCAGGCCCAGGCGTTCCAGGGCTGCTCTGCGGGCCGCGTGCGAGAGGGACTCTC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS TCA 72 bp CCGACACAGAGGCGCGTACCAGACCCACGGCAGGTGTaGGAGGGGCGGCCCAAGGTGGGGCTCCTGCTCTGG +
Preference number: 6 (lower is better)
Translates to: PTQRRVPDPRQV*EGRPKVGLLLW
Trigger: CCAGAGCAGGAGCCCCACCTTGGGCCGCCCCTCTCACACCTGCCGTGGGTCTGGTACGCGCCTCTGTGTCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS GCA 72 bp CCAGCAGAGGCCCGATGGGCAGCTGCTCAGGAGACATaGACGCCGGGGTGCTGGCCGCCCAGGACTGCCCAA +
Preference number: 6 (lower is better)
Translates to: PAEARWAAAQET*TPGCWPPRTAQ
Trigger: TTGGGCAGTCCTGGGCGGCCAGCACCCCGGCGTGCATGTCTCCTGAGCAGCTGCCCATCGGGCCTCTGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS CCA 72 bp CCAGGGGACGCTGCAGGAGTGCCCCGGGCTGCCCAGTaGCTGACGGTGGAAAGTGCCCACGTGCTGCTGTGG +
Preference number: 6 (lower is better)
Translates to: PGDAAGVPRAAQ*LTVESAHVLLW
Trigger: CCACAGCAGCACGTGGGCACTTTCCACCGTCAGCCACTGGGCAGCCCGGGGCACTCCTGCAGCGTCCCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS GCA 72 bp CAGTGCAGGTGGAACCGCCCTCACGGGGCATGGAGATaGTGGCTTTCCCATCGGACAGGAGAAGGTCGGGGC +
Preference number: 6 (lower is better)
Translates to: QCRWNRPHGAWR*WLSHRTGEGRG
Trigger: GCCCCGACCTTCTCCTGTCCGATGGGAAAGCCAGCATCTCCATGCCCCGTGAGGGCGGTTCCACCTGCACTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS GCA 72 bp CACCACACACAGAGGGCACACGGGCCATCTGGGCAATaGTGGTTGCGGCCTTCTGGGCTCCAGGCCTCTGTC +
Preference number: 6 (lower is better)
Translates to: HHTQRAHGPSGQ*WLRPSGLQASV
Trigger: GACAGAGGCCTGGAGCCCAGAAGGCCGCAACCAGCATTGCCCAGATGGCCCGTGTGCCCTCTGTGTGTGGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS CCA 72 bp TGCAGGTGGAACCGCCCTCACGGGGCATGGAGATGCTaGCTTTCCCATCGGACAGGAGAAGGTCGGGGCAGG +
Preference number: 6 (lower is better)
Translates to: CRWNRPHGAWRC*LSHRTGEGRGR
Trigger: CCTGCCCCGACCTTCTCCTGTCCGATGGGAAAGCCAGCATCTCCATGCCCCGTGAGGGCGGTTCCACCTGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS CCA 72 bp GCAGAAGCACCACACACAGAGGGCACACGGGCCATCTaGGCAATGCTGGTTGCGGCCTTCTGGGCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: AEAPHTEGTRAI*AMLVAAFWAPG
Trigger: GCCTGGAGCCCAGAAGGCCGCAACCAGCATTGCCCAGATGGCCCGTGTGCCCTCTGTGTGTGGTGCTTCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS CCA 72 bp TGTGTTCCCCAGGGTCAGGACATCGGGCAGTGCAGGTaGAACCGCCCTCACGGGGCATGGAGATGCTGGCTT +
Preference number: 6 (lower is better)
Translates to: CVPQGQDIGQCR*NRPHGAWRCWL
Trigger: AAGCCAGCATCTCCATGCCCCGTGAGGGCGGTTCCACCTGCACTGCCCGATGTCCTGACCCTGGGGAACACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS CCA 72 bp ACACGGGCCATCTGGGCAATGCTGGTTGCGGCCTTCTaGGCTCCAGGCCTCTGTCCTCAAGCCCCTGTAGAG +
Preference number: 6 (lower is better)
Translates to: TRAIWAMLVAAF*APGLCPQAPVE
Trigger: CTCTACAGGGGCTTGAGGACAGAGGCCTGGAGCCCAGAAGGCCGCAACCAGCATTGCCCAGATGGCCCGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS TCA 72 bp CTGACGGTGGAAAGTGCCCACGTGCTGCTGTGGAACTaGCACAAACCACAGGAATGGCCCGGTCGCCCGGGA +
Preference number: 6 (lower is better)
Translates to: LTVESAHVLLWN*HKPQEWPGRPG
Trigger: TCCCGGGCGACCGGGCCATTCCTGTGGTTTGTGTCAGTTCCACAGCAGCACGTGGGCACTTTCCACCGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS GCA 72 bp AGTGCCCCGGGCTGCCCAGTGGCTGACGGTGGAAAGTaGCCACGTGCTGCTGTGGAACTGACACAAACCACA +
Preference number: 6 (lower is better)
Translates to: SAPGCPVADGGK*PRAAVELTQTT
Trigger: TGTGGTTTGTGTCAGTTCCACAGCAGCACGTGGGCACTTTCCACCGTCAGCCACTGGGCAGCCCGGGGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547315.6
CDS GCA 72 bp GTCCGCGAGTTGTGCTGCTGGGGACAGAGATGTCAATaGTGCCAGCACAGAGCCCACCCCCACCGTCAGCTT +
Preference number: 6 (lower is better)
Translates to: VRELCCWGQRCQ*CQHRAHPHRQL
Trigger: AAGCTGACGGTGGGGGTGGGCTCTGTGCTGGCAGCATTGACATCTCTGTCCCCAGCAGCACAACTCGCGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS CCA 72 bp ATCGGGCAGTGCAGGTGGAACCGCCCTCACGGGGCATaGAGATGCTGGCTTTCCCATCGGACAGGAGAAGGT +
Preference number: 6 (lower is better)
Translates to: IGQCRWNRPHGA*RCWLSHRTGEG
Trigger: ACCTTCTCCTGTCCGATGGGAAAGCCAGCATCTCCATGCCCCGTGAGGGCGGTTCCACCTGCACTGCCCGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS CCA 72 bp GACTCCCCATGCCTCTGGGTCCGCGAGTTGTGCTGCTaGGGACAGAGATGTCAATGCTGCCAGCACAGAGCC +
Preference number: 6 (lower is better)
Translates to: DSPCLWVRELCC*GQRCQCCQHRA
Trigger: GGCTCTGTGCTGGCAGCATTGACATCTCTGTCCCCAGCAGCACAACTCGCGGACCCAGAGGCATGGGGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS CCA 72 bp CCAGGGCTGGCATGCTGGCCGGAAAGCTCCAGCAGCTaGGTCCTTGGGCATCTTGTCAGCATCTCTGTGGGA +
Preference number: 6 (lower is better)
Translates to: PGLACWPESSSS*VLGHLVSISVG
Trigger: TCCCACAGAGATGCTGACAAGATGCCCAAGGACCCAGCTGCTGGAGCTTTCCGGCCAGCATGCCAGCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549584.5
CDS GCA 72 bp CCCACCTCCCGTGCCCCCTCTATGCCTCACAGCACCTaGCCTGGAGTAGCTGACTTACTGCCGTTACTGTCT +
Preference number: 6 (lower is better)
Translates to: PTSRAPSMPHST*PGVADLLPLLS
Trigger: AGACAGTAACGGCAGTAAGTCAGCTACTCCAGGGCAGGTGCTGTGAGGCATAGAGGGGGCACGGGAGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS TCA 72 bp GCGCCAATCGTGCTGCCCCTTCTCATAGGACCCCTATaGCCCACAGATGGCAGGGACCTCAGGAGAGATGCT +
Preference number: 6 (lower is better)
Translates to: APIVLPLLIGPL*PTDGRDLRRDA
Trigger: AGCATCTCTCCTGAGGTCCCTGCCATCTGTGGGTCATAGGGGTCCTATGAGAAGGGGCAGCACGATTGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550614.5
CDS CCA 72 bp CTGCACTCTTTTGGGGCAGAAGTGGTTCTCGGTGGCTaGGGTTCTGTGGGTCCCTCGAGGAGTTCAAGGGAC +
Preference number: 6 (lower is better)
Translates to: LHSFGAEVVLGG*GSVGPSRSSRD
Trigger: GTCCCTTGAACTCCTCGAGGGACCCACAGAACCCCAGCCACCGAGAACCACTTCTGCCCCAAAAGAGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549584.5
CDS CCA 72 bp GGCATGCTGGCCGGAAAGCTCCAGCAGCTGGGTCCTTaGGCATCTTGTCAGCATCTCTGTGGGATCACTGCA +
Preference number: 6 (lower is better)
Translates to: GMLAGKLQQLGP*ASCQHLCGITA
Trigger: TGCAGTGATCCCACAGAGATGCTGACAAGATGCCCAAGGACCCAGCTGCTGGAGCTTTCCGGCCAGCATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549584.5
CDS CAA 90 bp TCACCCAAGGTCCACCCTGGCATGGTTGGTGAGAACTGCACTCTTTaGGGGCAGAAGTGGTTCTCGGTGGCTGGGGTTCTGTGGGTCCCT +
Preference number: 6 (lower is better)
Translates to: SPKVHPGMVGENCTL*GQKWFSVAGVLWVP
Trigger: AGGGACCCACAGAACCCCAGCCACCGAGAACCACTTCTGCCCCAAAAGAGTGCAGTTCTCACCAACCATGCCAGGGTGGACCTTGGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549584.5
CDS CAA 90 bp TGGGACGGCAGAAGTTCCTGTCACCCAAGGTCCACCCTGGCATGGTaGGTGAGAACTGCACTCTTTTGGGGCAGAAGTGGTTCTCGGTGG +
Preference number: 6 (lower is better)
Translates to: WDGRSSCHPRSTLAW*VRTALFWGRSGSRW
Trigger: CCACCGAGAACCACTTCTGCCCCAAAAGAGTGCAGTTCTCACCAACCATGCCAGGGTGGACCTTGGGTGACAGGAACTTCTGCCGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549584.5
CDS GCA 72 bp TCTCCATTCCAAACTGTCATCACTCAGCCTCTCAGGTaGCACTCGGAGGGAAGCGCTGGCTGCTTCCTCCTG +
Preference number: 6 (lower is better)
Translates to: SPFQTVITQPLR*HSEGSAGCFLL
Trigger: CAGGAGGAAGCAGCCAGCGCTTCCCTCCGAGTGGCACCTGAGAGGCTGAGTGATGACAGTTTGGAATGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS CCA 72 bp GGGGCTCCAGAGTGTGGAACGTTTTCTAGAACTCTGTaGCTGAGAACCATGAGGCAGCCGGTGCCCACTCAG +
Preference number: 6 (lower is better)
Translates to: GAPECGTFSRTL*LRTMRQPVPTQ
Trigger: CTGAGTGGGCACCGGCTGCCTCATGGTTCTCAGCCACAGAGTTCTAGAAAACGTTCCACACTCTGGAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550614.5
CDS CAA 72 bp GGCCGGAAAGCTCCAGCAGCTGGGTCCTTGGGCATCTaGTCAGCATCTCTGTGGGATCACTGCAGACATTTC +
Preference number: 6 (lower is better)
Translates to: GRKAPAAGSLGI*SASLWDHCRHF
Trigger: GAAATGTCTGCAGTGATCCCACAGAGATGCTGACAAGATGCCCAAGGACCCAGCTGCTGGAGCTTTCCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549584.5
CDS CAA 90 bp GCCATGTCCCTGGCCTCTGATGTGGCTGACGGCTCAGTTATCTGCTaGGAGAGAGCTCCACGTCCACTAGAAAGAATGAGGGCTTTGCAG +
Preference number: 6 (lower is better)
Translates to: AMSLASDVADGSVIC*ERAPRPLERMRALQ
Trigger: CTGCAAAGCCCTCATTCTTTCTAGTGGACGTGGAGCTCTCTCCAAGCAGATAACTGAGCCGTCAGCCACATCAGAGGCCAGGGACATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549584.5
CDS CAA 90 bp TGGCATGCTGGCCGGAAAGCTCCAGCAGCTGGGTCCTTGGGCATCTaGTCAGCATCTCTGTGGGATCACTGCAGACATTTCTCCAGCATA +
Preference number: 6 (lower is better)
Translates to: WHAGRKAPAAGSLGI*SASLWDHCRHFSSI
Trigger: TATGCTGGAGAAATGTCTGCAGTGATCCCACAGAGATGCTGACAAGATGCCCAAGGACCCAGCTGCTGGAGCTTTCCGGCCAGCATGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549584.5
CDS TCA 72 bp GTTCCTGTCACCCAAGGTCCACCCTGGCATGGTTGGTaGGAACTGCACTCTTTTGGGGCAGAAGTGGTTCTC +
Preference number: 6 (lower is better)
Translates to: VPVTQGPPWHGW*ELHSFGAEVVL
Trigger: GAGAACCACTTCTGCCCCAAAAGAGTGCAGTTCTCACCAACCATGCCAGGGTGGACCTTGGGTGACAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549584.5
CDS GCA 72 bp CTTCAGGGCCTCTTGGTCTGGATCAGGGCTTTGCAATaGTGGAGACAGAAGCTGCTGACAGTGAGGAGTCCT +
Preference number: 6 (lower is better)
Translates to: LQGLLVWIRALQ*WRQKLLTVRSP
Trigger: AGGACTCCTCACTGTCAGCAGCTTCTGTCTCCAGCATTGCAAAGCCCTGATCCAGACCAAGAGGCCCTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549584.5
CDS CCA 72 bp GGCAGAAGTTCCTGTCACCCAAGGTCCACCCTGGCATaGTTGGTGAGAACTGCACTCTTTTGGGGCAGAAGT +
Preference number: 6 (lower is better)
Translates to: GRSSCHPRSTLA*LVRTALFWGRS
Trigger: ACTTCTGCCCCAAAAGAGTGCAGTTCTCACCAACCATGCCAGGGTGGACCTTGGGTGACAGGAACTTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549584.5
CDS CCA 72 bp CAGGTGATGGTCACGTTCCTTCAGGGCCTCTTGGTCTaGATCAGGGCTTTGCAATGCTGGAGACAGAAGCTG +
Preference number: 6 (lower is better)
Translates to: QVMVTFLQGLLV*IRALQCWRQKL
Trigger: CAGCTTCTGTCTCCAGCATTGCAAAGCCCTGATCCAGACCAAGAGGCCCTGAAGGAACGTGACCATCACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549584.5
CDS CAA 72 bp ACGTTCCTTCAGGGCCTCTTGGTCTGGATCAGGGCTTaGCAATGCTGGAGACAGAAGCTGCTGACAGTGAGG +
Preference number: 6 (lower is better)
Translates to: TFLQGLLVWIRA*QCWRQKLLTVR
Trigger: CCTCACTGTCAGCAGCTTCTGTCTCCAGCATTGCAAAGCCCTGATCCAGACCAAGAGGCCCTGAAGGAACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549584.5
CDS CAA 90 bp GTGATGGTCACGTTCCTTCAGGGCCTCTTGGTCTGGATCAGGGCTTaGCAATGCTGGAGACAGAAGCTGCTGACAGTGAGGAGTCCTTCA +
Preference number: 6 (lower is better)
Translates to: VMVTFLQGLLVWIRA*QCWRQKLLTVRSPS
Trigger: TGAAGGACTCCTCACTGTCAGCAGCTTCTGTCTCCAGCATTGCAAAGCCCTGATCCAGACCAAGAGGCCCTGAAGGAACGTGACCATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549584.5
CDS TCA 72 bp TGTCTACTATGTGCCACACGTCACTGCTACGCACTGTaGGGGACTGAGAAGGTCTGCCTGCAGGAAGTTCAC +
Preference number: 6 (lower is better)
Translates to: CLLCATRHCYAL*GTEKVCLQEVH
Trigger: GTGAACTTCCTGCAGGCAGACCTTCTCAGTCCCTCACAGTGCGTAGCAGTGACGTGTGGCACATAGTAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS GCA 72 bp CACATTCTCCACAGTTTTTCCCCAGGGATCATGCTTTaGAGAAGCACCACACACAGAGGGCACACGGGCCAT +
Preference number: 6 (lower is better)
Translates to: HILHSFSPGIML*RSTTHRGHTGH
Trigger: ATGGCCCGTGTGCCCTCTGTGTGTGGTGCTTCTGCAAAGCATGATCCCTGGGGAAAAACTGTGGAGAATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS GCA 72 bp TCCCTGGCCTCTGATGTGGCTGACGGCTCAGTTATCTaGTTGGAGAGAGCTCCACGTCCACTAGAAAGAATG +
Preference number: 6 (lower is better)
Translates to: SLASDVADGSVI*LERAPRPLERM
Trigger: CATTCTTTCTAGTGGACGTGGAGCTCTCTCCAAGCAGATAACTGAGCCGTCAGCCACATCAGAGGCCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549584.5
CDS CCA 72 bp GCAGCTGGGTCCTTGGGCATCTTGTCAGCATCTCTGTaGGATCACTGCAGACATTTCTCCAGCATAGAGGCT +
Preference number: 6 (lower is better)
Translates to: AAGSLGILSASL*DHCRHFSSIEA
Trigger: AGCCTCTATGCTGGAGAAATGTCTGCAGTGATCCCACAGAGATGCTGACAAGATGCCCAAGGACCCAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549584.5
CDS CAA 72 bp AGAAGTTCCTGTCACCCAAGGTCCACCCTGGCATGGTaGGTGAGAACTGCACTCTTTTGGGGCAGAAGTGGT +
Preference number: 6 (lower is better)
Translates to: RSSCHPRSTLAW*VRTALFWGRSG
Trigger: ACCACTTCTGCCCCAAAAGAGTGCAGTTCTCACCAACCATGCCAGGGTGGACCTTGGGTGACAGGAACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
ENST00000549584.5
CDS CAA 72 bp GCTCTGTTAGACTGGTGCTTGGTCTGGATCAGGGCTTaGCAATGCTGGAGACAGAAGCTGCTGACAGTGAGG +
Preference number: 6 (lower is better)
Translates to: ALLDWCLVWIRA*QCWRQKLLTVR
Trigger: CCTCACTGTCAGCAGCTTCTGTCTCCAGCATTGCAAAGCCCTGATCCAGACCAAGCACCAGTCTAACAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548178.1
CDS CAA 72 bp CTGGCCTCTGATGTGGCTGACGGCTCAGTTATCTGCTaGGAGAGAGCTCCACGTCCACTAGAAAGAATGAGG +
Preference number: 6 (lower is better)
Translates to: LASDVADGSVIC*ERAPRPLERMR
Trigger: CCTCATTCTTTCTAGTGGACGTGGAGCTCTCTCCAAGCAGATAACTGAGCCGTCAGCCACATCAGAGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549584.5
CDS CAA 90 bp ATCTGCTTGGAGAGAGCTCCACGTCCACTAGAAAGAATGAGGGCTTaGCAGTGTCACTCAGGTCAGGTGATGGTCACGTTCCTTCAGGGC +
Preference number: 6 (lower is better)
Translates to: ICLERAPRPLERMRA*QCHSGQVMVTFLQG
Trigger: GCCCTGAAGGAACGTGACCATCACCTGACCTGAGTGACACTGCAAAGCCCTCATTCTTTCTAGTGGACGTGGAGCTCTCTCCAAGCAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549584.5
CDS GCA 72 bp TCCTTGGGCATCTTGTCAGCATCTCTGTGGGATCACTaGAGACATTTCTCCAGCATAGAGGCTTCAGGGTGG +
Preference number: 6 (lower is better)
Translates to: SLGILSASLWDH*RHFSSIEASGW
Trigger: CCACCCTGAAGCCTCTATGCTGGAGAAATGTCTGCAGTGATCCCACAGAGATGCTGACAAGATGCCCAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549584.5
CDS CAA 72 bp GAGAGAGCTCCACGTCCACTAGAAAGAATGAGGGCTTaGCAGTGTCACTCAGGTCAGGTGATGGTCACGTTC +
Preference number: 6 (lower is better)
Translates to: ERAPRPLERMRA*QCHSGQVMVTF
Trigger: GAACGTGACCATCACCTGACCTGAGTGACACTGCAAAGCCCTCATTCTTTCTAGTGGACGTGGAGCTCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549584.5
CDS CAA 72 bp TCGAGGAGTTCAAGGGACTGTGAGAATTGTCCAGACTaGGCTGAAGATTCCCGAAAGCCTTCAAACTCCCCC +
Preference number: 6 (lower is better)
Translates to: SRSSRDCENCPD*AEDSRKPSNSP
Trigger: GGGGGAGTTTGAAGGCTTTCGGGAATCTTCAGCCAAGTCTGGACAATTCTCACAGTCCCTTGAACTCCTCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389964.7
ENST00000547315.6
ENST00000548641.5
CDS TCA 72 bp ATCCACTCGAGCGCTGTCTGTCTTTCAATGCTCAGTTaGAAGTGTGTCCCTGGAAAATGGCCATCTGCGAGT +
Preference number: 6 (lower is better)
Translates to: IHSSAVCLSMLS*KCVPGKWPSAS
Trigger: ACTCGCAGATGGCCATTTTCCAGGGACACACTTTCAACTGAGCATTGAAAGACAGACAGCGCTCGAGTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550614.5
CDS GCA 72 bp AGTTTTCTGGATTCGTTACTCGAGCTTCTCAACCACTaGGGCCTAATCCACTCGAGCGCTGTCTGTCTTTCA +
Preference number: 6 (lower is better)
Translates to: SFLDSLLELLNH*GLIHSSAVCLS
Trigger: TGAAAGACAGACAGCGCTCGAGTGGATTAGGCCGCAGTGGTTGAGAAGCTCGAGTAACGAATCCAGAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000550614.5
CDS CAA 72 bp AATCCACTCGAGCGCTGTCTGTCTTTCAATGCTCAGTaGAAAGTGTGTCCCTGGAAAATGGCCATCTGCGAG +
Preference number: 6 (lower is better)
Translates to: NPLERCLSFNAQ*KVCPWKMAICE
Trigger: CTCGCAGATGGCCATTTTCCAGGGACACACTTTCAACTGAGCATTGAAAGACAGACAGCGCTCGAGTGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550614.5
CDS CAA 72 bp CCTCCAAGGAGTGGAAGCTCCGTGAGACCAGATATTTaGCTGGTTTTGTTCACTCAAGTGCCTAGAACTGTG +
Preference number: 6 (lower is better)
Translates to: PPRSGSSVRPDI*LVLFTQVPRTV
Trigger: CACAGTTCTAGGCACTTGAGTGAACAAAACCAGCAAAATATCTGGTCTCACGGAGCTTCCACTCCTTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS CAA 90 bp TTACTGTCTCCTCCAAGGAGTGGAAGCTCCGTGAGACCAGATATTTaGCTGGTTTTGTTCACTCAAGTGCCTAGAACTGTGCTGAGTACA +
Preference number: 6 (lower is better)
Translates to: LLSPPRSGSSVRPDI*LVLFTQVPRTVLST
Trigger: TGTACTCAGCACAGTTCTAGGCACTTGAGTGAACAAAACCAGCAAAATATCTGGTCTCACGGAGCTTCCACTCCTTGGAGGAGACAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS TCA 72 bp TGCTGGTTTTGTTCACTCAAGTGCCTAGAACTGTGCTaGGTACAAAACAGATGCTCCCAAACTACGAGTACC +
Preference number: 6 (lower is better)
Translates to: CWFCSLKCLELC*VQNRCSQTTST
Trigger: GGTACTCGTAGTTTGGGAGCATCTGTTTTGTACTCAGCACAGTTCTAGGCACTTGAGTGAACAAAACCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS GCA 72 bp CAAAACAGATGCTCCCAAACTACGAGTACCAGTGCATaGTCAGGAGAACAAATGAGCAAACCAACGGTGAAT +
Preference number: 6 (lower is better)
Translates to: QNRCSQTTSTSA*SGEQMSKPTVN
Trigger: ATTCACCGTTGGTTTGCTCATTTGTTCTCCTGAGCATGCACTGGTACTCGTAGTTTGGGAGCATCTGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS TCA 72 bp ATCCACTCGAGCGCTGTCTGTCTTTCAATGCTCAGTTaGAAGTGTGTCCCACAATTTATGTACACGTTCAAC +
Preference number: 6 (lower is better)
Translates to: IHSSAVCLSMLS*KCVPQFMYTFN
Trigger: GTTGAACGTGTACATAAATTGTGGGACACACTTTCAACTGAGCATTGAAAGACAGACAGCGCTCGAGTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000551046.5
CDS CCA 72 bp TGGTGTGTATGCTCTGAAGGGCTCTCCAGAGTTTTCTaGATTCGTTACTGGAAAACAGATGCACTTGTTAAA +
Preference number: 6 (lower is better)
Translates to: WCVCSEGLSRVF*IRYWKTDALVK
Trigger: TTTAACAAGTGCATCTGTTTTCCAGTAACGAATCCAGAAAACTCTGGAGAGCCCTTCAGAGCATACACACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549240.1
CDS CAA 72 bp AATCCACTCGAGCGCTGTCTGTCTTTCAATGCTCAGTaGAAAGTGTGTCCCACAATTTATGTACACGTTCAA +
Preference number: 6 (lower is better)
Translates to: NPLERCLSFNAQ*KVCPTIYVHVQ
Trigger: TTGAACGTGTACATAAATTGTGGGACACACTTTCAACTGAGCATTGAAAGACAGACAGCGCTCGAGTGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389964.7
ENST00000551046.5