RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLASRP (Homo sapiens)

Ensembl gene IDs: ENSG00000104859

Ensembl transcript IDs: ENST00000221455.8, ENST00000391952.7, ENST00000391953.8, ENST00000544944.6, ENST00000585432.1, ENST00000585615.5, ENST00000587112.1, ENST00000588016.1, ENST00000588070.1, ENST00000588247.5, ENST00000588936.5, ENST00000591410.5, ENST00000591904.1, ENST00000592056.5, ENST00000592876.1

Found 239 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTCACCGTCGGCCATGCCATAAGTCGTGGCCTGTTTGTTGAGATCTaGCACCTGCTCCTGGTTCAATTCATCCACGTCCACCTCCACGTC +
Preference number: 1 (lower is better)
Translates to: VTVGHAISRGLFVEI*HLLLVQFIHVHLHV
Trigger: GACGTGGAGGTGGACGTGGATGAATTGAACCAGGAGCAGGTGGCAGATCTCAACAAACAGGCCACGACTTATGGCATGGCCGACGGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591410.5
3UTR-3UTR GCA 90 bp AATGTCGGTAATGGGGGCTTCGGGATCGGGACCTTGAGCGCCTTCGAGAAGAGCGAGGGTGAGCGGCTCTaGCGGCTGTACTGGCGTTCC +
Preference number: 2 (lower is better)
Translates to: NVGNGGFGIGTLSAFEKSEGERL*RLYWRS
Trigger: GGAACGCCAGTACAGCCGGCAGAGCCGCTCACCCTC...GCTCTTCTCGAAGGCGCTCAAGGTCCCGATCCCGAAGCCCCCATTACCGACATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391952.7
3UTR-3UTR CCA 90 bp GGTGGGCTGATCTTGCGACCCCTCAGCCGCTTCTCCCGAAACTCTCTCCGCTGGGGCGTCCCGAGTACATaGCCTTCTCCTCCTCAAGAG +
Preference number: 2 (lower is better)
Translates to: GGLILRPLSRFSRNSLRWGVPST*PSPPQE
Trigger: CTCTTGAGGAGGAGAAGGCCATGTACTCGGGACGCC...CCAGCGGAGAGAGTTTCGGGAGAAGCGGCTGAGGGGTCGCAAGATCAGCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587112.1
3UTR CAA 90 bp CGAGAGCGGCGTCCCGAGTACATGGCCTTCTCCTCCTCAAGAGCCTaGGCATGCTTGATGGCCTCTGCCTCCTCCTTGTCTTTCCGGAGC +
Preference number: 2 (lower is better)
Translates to: RERRPEYMAFSSSRA*ACLMASASSLSFRS
Trigger: GCTCCGGAAAGACAAGGAGGAGGCAGAGGCCATCAAGCATGCCAAGGCTCTTGAGGAGGAGAAGGCCATGTACTCGGGACGCCGCTCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587112.1
3UTR-3UTR GCA 90 bp CGAAACTCTCTCCGCTGGCGTCGAGAGCGGCGTCCCGAGTACATGGCCTTCTCCAGTCACCGTCGGCCATaGCATAAGTCGTGGCCTGTT +
Preference number: 2 (lower is better)
Translates to: RNSLRWRRERRPEYMAFSSHRRP*HKSWPV
Trigger: AACAGGCCACGACTTATGGCATGGCCGACGGTGACT...GGAGAAGGCCATGTACTCGGGACGCCGCTCTCGACGCCAGCGGAGAGAGTTTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587112.1
3UTR-3UTR GCA 90 bp GCTTCTCCCGAAACTCTCTCCGCTGGCGTCGAGAGCGGCGTCCCGAGTACATGGTCAAGAGCCTTGGCATaGTTGATGGCCTCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: ASPETLSAGVESGVPSTWSRALA*LMASAS
Trigger: GGAGGCAGAGGCCATCAAGCATGCCAAGGCTCTTGA...CCATGTACTCGGGACGCCGCTCTCGACGCCAGCGGAGAGAGTTTCGGGAGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587112.1
3UTR-3UTR TCA 90 bp AATGTCGGTAATGGGGGCTTCGGGATCGGGACCTTGAGCGCCTTCGAGAAGAGCAGCAGCATCACAGCTTaGGCCCCTTACCCACCCCCT +
Preference number: 2 (lower is better)
Translates to: NVGNGGFGIGTLSAFEKSSSITA*APYPPP
Trigger: AGGGGGTGGGTAAGGGGCTCAAGCTGTGATGCTGCT...GCTCTTCTCGAAGGCGCTCAAGGTCCCGATCCCGAAGCCCCCATTACCGACATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000391952.7
3UTR-3UTR GCA 90 bp AATGTCGGTAATGGGGGCTTCGGGATCGGGACCTTGAGCGCCTTCGAGAAGAGCGTTCCCGCTCCTTCATaGGGATCTTGCGGGCCATGG +
Preference number: 2 (lower is better)
Translates to: NVGNGGFGIGTLSAFEKSVPAPS*GSCGPW
Trigger: CCATGGCCCGCAAGATCCGCATGAAGGAGCGGGAAC...GCTCTTCTCGAAGGCGCTCAAGGTCCCGATCCCGAAGCCCCCATTACCGACATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391952.7
3UTR-3UTR TCA 90 bp AGCGGGACTCTGAGCTGGACTCCGAGGGTGACCGCTTATAGGGGTCATAGGTGGTCGTGGCCTGTTTGTTaGGATCTGCCACCTGCTCCT +
Preference number: 2 (lower is better)
Translates to: SGTLSWTPRVTAYRGHRWSWPVC*DLPPAP
Trigger: AGGAGCAGGTGGCAGATCTCAACAAACAGGCCACGA...CCACCTATGACCCCTATAAGCGGTCACCCTCGGAGTCCAGCTCAGAGTCCCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587112.1
3UTR-3UTR GCA 90 bp CTGATCTTGCGACCCCTCAGCCGCTTCTCCCGAAACTCTCTCCGCTGGCGTCGAATGCTTGATGGCCTCTaGCTCCTCCTTGTCTTTCCG +
Preference number: 2 (lower is better)
Translates to: LILRPLSRFSRNSLRWRRMLDGL*LLLVFP
Trigger: CGGAAAGACAAGGAGGAGGCAGAGGCCATCAAGCAT...TCGACGCCAGCGGAGAGAGTTTCGGGAGAAGCGGCTGAGGGGTCGCAAGATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587112.1
3UTR-3UTR GCA 90 bp CGGCTCTGCCGGCTGTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTTGCCGCTCATGCTCCTaGTGGATCATCTTTTCTTGT +
Preference number: 2 (lower is better)
Translates to: RLCRLYWRSHSSLSFSRRCRSCS*WIIFSC
Trigger: ACAAGAAAAGATGATCCAGCAGGAGCATGAGCGGCA...ACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGCCGGCAGAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391952.7
3UTR-3UTR CCA 90 bp CTCTGCCGGCTGTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTTCCCGCTCATGCTCCTGCTaGATCATCTTTTCTTGTGCC +
Preference number: 2 (lower is better)
Translates to: LCRLYWRSHSSLSFSRRSRSCSC*IIFSCA
Trigger: GGCACAAGAAAAGATGATCCAGCAGGAGCATGAGCG...GGAACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGCCGGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391952.7
3UTR-3UTR TCA 90 bp CCTGACGAAGTCACCGTCGGCCATGCCATAAGTCGTGGCCTGTTTGTTGAGATCTCGTGGCCTGTTTGTTaGGATCTGCCACCTGCTCCT +
Preference number: 2 (lower is better)
Translates to: PDEVTVGHAISRGLFVEISWPVC*DLPPAP
Trigger: AGGAGCAGGTGGCAGATCTCAACAAACAGGCCACGA...GATCTCAACAAACAGGCCACGACTTATGGCATGGCCGACGGTGACTTCGTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587112.1
ENST00000591410.5
3UTR CCA 72 bp CGACCCCTCAGCCGCTTCTCCCGAAACTCTCTCCGCTaGCGTCGAGAGCGGCGTCCCGAGTACATGGCCTTC +
Preference number: 3 (lower is better)
Translates to: RPLSRFSRNSLR*RRERRPEYMAF
Trigger: GAAGGCCATGTACTCGGGACGCCGCTCTCGACGCCAGCGGAGAGAGTTTCGGGAGAAGCGGCTGAGGGGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587112.1
3UTR-3UTR CAA 90 bp GGGGCTGTCTCGGCGGGCATAGCTGGGTGGGCTGATCTTGCGACCCCTCAGCCGTCCTCCTCAAGAGCCTaGGCATGCTTGATGGCCTCT +
Preference number: 3 (lower is better)
Translates to: GAVSAGIAGWADLATPQPSSSRA*ACLMAS
Trigger: AGAGGCCATCAAGCATGCCAAGGCTCTTGAGGAGGA...CGGCTGAGGGGTCGCAAGATCAGCCCACCCAGCTATGCCCGCCGAGACAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587112.1
3UTR-3UTR CAA 90 bp CGGCTCTGCCGGCTGTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTCAGCAGCATCACAGCTaGAGCCCCTTACCCACCCCC +
Preference number: 3 (lower is better)
Translates to: RLCRLYWRSHSSLSFSRRQQHHS*SPLPTP
Trigger: GGGGGTGGGTAAGGGGCTCAAGCTGTGATGCTGCTG...ACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGCCGGCAGAGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391952.7
3UTR-3UTR CAA 90 bp CTGGGTGGGCTGATCTTGCGACCCCTCAGCCGCTTCTCCCGAAACTCTCTCCGCGCCTCTGCCTCCTCCTaGTCTTTCCGGAGCATCCTG +
Preference number: 3 (lower is better)
Translates to: LGGLILRPLSRFSRNSLRASASS*SFRSIL
Trigger: CAGGATGCTCCGGAAAGACAAGGAGGAGGCAGAGGC...GCGGAGAGAGTTTCGGGAGAAGCGGCTGAGGGGTCGCAAGATCAGCCCACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587112.1
3UTR-3UTR CAA 90 bp TCTTGCGACCCCTCAGCCGCTTCTCCCGAAACTCTCTCCGCTGGCGTCGAGAGCAGAGCCTTGGCATGCTaGATGGCCTCTGCCTCCTCC +
Preference number: 3 (lower is better)
Translates to: SCDPSAASPETLSAGVESRALAC*MASASS
Trigger: GGAGGAGGCAGAGGCCATCAAGCATGCCAAGGCTCT...GCTCTCGACGCCAGCGGAGAGAGTTTCGGGAGAAGCGGCTGAGGGGTCGCAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587112.1
3UTR-3UTR CAA 90 bp AGCGGGACTCTGAGCTGGACTCCGAGGGTGACCGCTTATAGGGGTCATAGGTGGCTGGGTGGGCTGATCTaGCGACCCCTCAGCCGCTTC +
Preference number: 3 (lower is better)
Translates to: SGTLSWTPRVTAYRGHRWLGGLI*RPLSRF
Trigger: GAAGCGGCTGAGGGGTCGCAAGATCAGCCCACCCAG...CCACCTATGACCCCTATAAGCGGTCACCCTCGGAGTCCAGCTCAGAGTCCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587112.1
3UTR-3UTR CAA 90 bp CTGATCTTGCGACCCCTCAGCCGCTTCTCCCGAAACTCTCTCCGCTGGCGTCGAGTCGTGGCCTGTTTGTaGAGATCTGCCACCTGCTCC +
Preference number: 3 (lower is better)
Translates to: LILRPLSRFSRNSLRWRRVVACL*RSATCS
Trigger: GGAGCAGGTGGCAGATCTCAACAAACAGGCCACGAC...TCGACGCCAGCGGAGAGAGTTTCGGGAGAAGCGGCTGAGGGGTCGCAAGATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587112.1
3UTR-3UTR CAA 90 bp ACGTCCACCTCCACGTCGATGTCGGGGATGACCTCATCTTCGTCCGAGTTGCTCGTCGTGGCCTGTTTGTaGAGATCTGCCACCTGCTCC +
Preference number: 3 (lower is better)
Translates to: TSTSTSMSGMTSSSSELLVVACL*RSATCS
Trigger: GGAGCAGGTGGCAGATCTCAACAAACAGGCCACGAC...GAGCAACTCGGACGAAGATGAGGTCATCCCCGACATCGACGTGGAGGTGGACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591410.5
3UTR TCA 72 bp CACCGTCGGCCATGCCATAAGTCGTGGCCTGTTTGTTaGGATCTGCCACCTGCTCCTGGTTCAATTCATCCA +
Preference number: 3 (lower is better)
Translates to: HRRPCHKSWPVC*DLPPAPGSIHP
Trigger: TGGATGAATTGAACCAGGAGCAGGTGGCAGATCTCAACAAACAGGCCACGACTTATGGCATGGCCGACGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591410.5
CDS-3UTR CCA 90 bp CTTCATGCGGATCTTGCGGGCCATGGCTCGAAGCTCGTCTTCCCGCTCCTGCCGCTGCGGCTACTGCTGTaGTGCCTGAGGCCCCGGCCG +
Preference number: 4 (lower is better)
Translates to: LHADLAGHGSKLVFPLLPLRLLL*CLRPRP
Trigger: CGGCCGGGGCCTCAGGCACCACAGCAGTAGCCGCAG...CGGCAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGCATGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR CCA 90 bp CTCCTTCATGCGGATCTTGCGGGCCATGGCTCGAAGCTCGTCTTCCCGCTCCTGGATGGCGAGGGGCTCTaGCTGCGGCTGCGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: LLHADLAGHGSKLVFPLLDGEGL*LRLRLR
Trigger: CCGCAGCCGCAGCCGCAGCCAGAGCCCCTCGCCATC...CAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGCATGAAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp CTCTGCCGGCTGTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTTCCGAGCCCCCACCTGAGTaGCGCCGGCCACGGCTACGG +
Preference number: 4 (lower is better)
Translates to: LCRLYWRSHSSLSFSRRSEPPPE*RRPRLR
Trigger: CCGTAGCCGTGGCCGGCGGCACTCAGGTGGGGGCTC...GGAACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGCCGGCAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp CTCTGCCGGCTGTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTTCCCGGCTACTGCTGTGGTaGCTGAGGCCCCGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: LCRLYWRSHSSLSFSRRSRLLLW*LRPRPP
Trigger: GGGCGGCCGGGGCCTCAGGCACCACAGCAGTAGCCG...GGAACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGCCGGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR CCA 90 bp GCGGATCTTGCGGGCCATGGCTCGAAGCTCGTCTTCCCGCTCCTGCCGCTCATGAGCTGGAGCGAGAGCTaGAGCGGGAGCTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: ADLAGHGSKLVFPLLPLMSWSES*SGSWRS
Trigger: GGACCTCCAGCTCCCGCTCCAGCTCTCGCTCCAGCT...CATGAGCGGCAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR CCA 90 bp CTCCTTCATGCGGATCTTGCGGGCCATGGCTCGAAGCTCGTCTTCCCGCTCCTGCTGCGGCTGCGGCTCTaGCTGGGGCTGGGGCTATGG +
Preference number: 4 (lower is better)
Translates to: LLHADLAGHGSKLVFPLLLRLRL*LGLGLW
Trigger: CCATAGCCCCAGCCCCAGCCAGAGCCGCAGCCGCAG...CAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGCATGAAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR TCA 90 bp CTCCTTCATGCGGATCTTGCGGGCCATGGCTCGAAGCTCGTCTTCCCGCTCCTGCCTGTAGCGGTCCCCTaGGTGGGAGCGGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LLHADLAGHGSKLVFPLLPVAVP*VGAAPA
Trigger: AGCAGGAGCCGCTCCCACTCAGGGGACCGCTACAGG...CAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGCATGAAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp CGACCCCTCAGCCGCTTCTCCCGAAACTCTCTCCGCTGGCGTCGAGAGCGGCGTCATCTTCGTCCGAGTTaGTCTCCTCCTCGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: RPLSRFSRNSLRWRRERRHLRPS*SPPRPL
Trigger: CAGCGGCCGAGGAGGAGAGCAACTCGGACGAAGATG...ACGCCGCTCTCGACGCCAGCGGAGAGAGTTTCGGGAGAAGCGGCTGAGGGGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587112.1
CDS-3UTR CCA 90 bp CGGCTCTGCCGGCTGTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTGGGACGCGGCCGGCCTaGTCAGCTTCTCTCTTGCGG +
Preference number: 4 (lower is better)
Translates to: RLCRLYWRSHSSLSFSRRGTRPA*SASLLR
Trigger: CCGCAAGAGAGAAGCTGACCAGGCCGGCCGCGTCCC...ACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGCCGGCAGAGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR TCA 90 bp CTTCATGCGGATCTTGCGGGCCATGGCTCGAAGCTCGTCTTCCCGCTCCTGCCGCATAGCTGGGTGGGCTaGTCTTGCGACCCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LHADLAGHGSKLVFPLLPHSWVG*SCDPSA
Trigger: GGCTGAGGGGTCGCAAGATCAGCCCACCCAGCTATG...CGGCAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGCATGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR TCA 90 bp GTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTTCCCGCTCCTTCATGACTGCGGGACGGGCTaGGGGACCAGCTGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: VLAFPLFSLLLSAFPLLHDCGTG*GTSCCG
Trigger: GCCGCAGCAGCTGGTCCCTCAGCCCGTCCCGCAGTC...ATGAAGGAGCGGGAACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp GCGGATCTTGCGGGCCATGGCTCGAAGCTCGTCTTCCCGCTCCTGCCGCTCATGCGAAGCTTCCGCTCATaGTTCCGAGCCTCGTGCCAC +
Preference number: 4 (lower is better)
Translates to: ADLAGHGSKLVFPLLPLMRSFRS*FRASCH
Trigger: GTGGCACGAGGCTCGGAAGCATGAGCGGAAGCTTCG...CATGAGCGGCAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp CTTCATGCGGATCTTGCGGGCCATGGCTCGAAGCTCGTCTTCCCGCTCCTGCCGGCTCGGCCATGTACCTaGAGGAACTGGGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LHADLAGHGSKLVFPLLPARPCT*RNWAGS
Trigger: GGACCCAGCCCAGTTCCTGCAGGTACATGGCCGAGC...CGGCAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGCATGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp GCTGATCTTGCGACCCCTCAGCCGCTTCTCCCGAAACTCTCTCCGCTGGCGTCGGCTCGGCCATGTACCTaGAGGAACTGGGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: ADLATPQPLLPKLSPLASARPCT*RNWAGS
Trigger: GGACCCAGCCCAGTTCCTGCAGGTACATGGCCGAGC...CGACGCCAGCGGAGAGAGTTTCGGGAGAAGCGGCTGAGGGGTCGCAAGATCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587112.1
CDS-3UTR GCA 90 bp CTCCTTCATGCGGATCTTGCGGGCCATGGCTCGAAGCTCGTCTTCCCGCTCCTGACCAGCTGCTGCGGCTaGGGCTACTGCTGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: LLHADLAGHGSKLVFPLLTSCCG*GYCCGA
Trigger: GGCACCACAGCAGTAGCCGCAGCCGCAGCAGCTGGT...CAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGCATGAAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp CGGCTCTGCCGGCTGTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTGGCTATGGCTGCGGCTaGGAGTCAGGCTGCGACTGC +
Preference number: 4 (lower is better)
Translates to: RLCRLYWRSHSSLSFSRRGYGCG*ESGCDC
Trigger: GCAGTCGCAGCCTGACTCGCAGCCGCAGCCATAGCC...ACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGCCGGCAGAGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp CTCCTTCATGCGGATCTTGCGGGCCATGGCTCGAAGCTCGTCTTCCCGCTCCTGGAGGGTGAGCGGCTCTaGCGGCTGTACTGGCGTTCC +
Preference number: 4 (lower is better)
Translates to: LLHADLAGHGSKLVFPLLEGERL*RLYWRS
Trigger: GGAACGCCAGTACAGCCGGCAGAGCCGCTCACCCTC...CAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGCATGAAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR CCA 90 bp GTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTTCCCGCTCCTTCATGGGGCCTCAACCGGCTaGTCGCCGCCTCCCACCGCT +
Preference number: 4 (lower is better)
Translates to: VLAFPLFSLLLSAFPLLHGASTG*SPPPTA
Trigger: AGCGGTGGGAGGCGGCGACCAGCCGGTTGAGGCCCC...ATGAAGGAGCGGGAACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR CCA 90 bp CACCTGCTCCTGGTTCAATTCATCCACGTCCACCTCCACGTCGATGTCGGGGATGGGGCCTCAACCGGCTaGTCGCCGCCTCCCACCGCT +
Preference number: 4 (lower is better)
Translates to: HLLLVQFIHVHLHVDVGDGASTG*SPPPTA
Trigger: AGCGGTGGGAGGCGGCGACCAGCCGGTTGAGGCCCC...ATCCCCGACATCGACGTGGAGGTGGACGTGGATGAATTGAACCAGGAGCAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591410.5
CDS-3UTR CCA 90 bp GGCCTCTGCCTCCTCCTTGTCTTTCCGGAGCATCCTGACGAAGTCACCGTCGGCCGAAACTCTCTCCGCTaGCGTCGAGAGCGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: GLCLLLVFPEHPDEVTVGRNSLR*RRERRP
Trigger: GGGACGCCGCTCTCGACGCCAGCGGAGAGAGTTTCG...GCCGACGGTGACTTCGTCAGGATGCTCCGGAAAGACAAGGAGGAGGCAGAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587112.1
CDS-3UTR CCA 90 bp CTTCATGCGGATCTTGCGGGCCATGGCTCGAAGCTCGTCTTCCCGCTCCTGCCGAGCGGGACTCTGAGCTaGACTCCGAGGGTGACCGCT +
Preference number: 4 (lower is better)
Translates to: LHADLAGHGSKLVFPLLPSGTLS*TPRVTA
Trigger: AGCGGTCACCCTCGGAGTCCAGCTCAGAGTCCCGCT...CGGCAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGCATGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR CCA 90 bp TCTTGCGACCCCTCAGCCGCTTCTCCCGAAACTCTCTCCGCTGGCGTCGAGAGCAGCGGGACTCTGAGCTaGACTCCGAGGGTGACCGCT +
Preference number: 4 (lower is better)
Translates to: SCDPSAASPETLSAGVESSGTLS*TPRVTA
Trigger: AGCGGTCACCCTCGGAGTCCAGCTCAGAGTCCCGCT...GCTCTCGACGCCAGCGGAGAGAGTTTCGGGAGAAGCGGCTGAGGGGTCGCAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587112.1
CDS-3UTR TCA 90 bp CGGCTCTGCCGGCTGTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTCTTCTCTCTTGCGGGTaGTGGCGAGGGGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: RLCRLYWRSHSSLSFSRRLLSCG*WRGALA
Trigger: AGCCAGAGCCCCTCGCCATCACCCGCAAGAGAGAAG...ACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGCCGGCAGAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp ACCCCTCAGCCGCTTCTCCCGAAACTCTCTCCGCTGGCGTCGAGAGCGGCGTCCCTACCTCGGCCACCGTaGTGTCCTCGTAGGTATAAC +
Preference number: 4 (lower is better)
Translates to: TPQPLLPKLSPLASRAASLPRPP*CPRRYN
Trigger: GTTATACCTACGAGGACAGCACGGTGGCCGAGGTAG...GGACGCCGCTCTCGACGCCAGCGGAGAGAGTTTCGGGAGAAGCGGCTGAGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587112.1
CDS-3UTR GCA 90 bp ACCCCTCAGCCGCTTCTCCCGAAACTCTCTCCGCTGGCGTCGAGAGCGGCGTCCTCAAGAGCCTTGGCATaGTTGATGGCCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: TPQPLLPKLSPLASRAASSRALA*LMASAS
Trigger: GGAGGCAGAGGCCATCAAGCATGCCAAGGCTCTTGA...GGACGCCGCTCTCGACGCCAGCGGAGAGAGTTTCGGGAGAAGCGGCTGAGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587112.1
CDS-3UTR GCA 90 bp CCTAATGTCGGTAATGGGGGCTTCGGGATCGGGACCTTGAGCGCCTTCGAGAAGTGCGGCAGCAGCGGCTaGGGCTGCCTCCTCATCGCT +
Preference number: 4 (lower is better)
Translates to: PNVGNGGFGIGTLSAFEKCGSSG*GCLLIA
Trigger: AGCGATGAGGAGGCAGCCGCAGCCGCTGCTGCCGCA...CTTCTCGAAGGCGCTCAAGGTCCCGATCCCGAAGCCCCCATTACCGACATTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp AATGTCGGTAATGGGGGCTTCGGGATCGGGACCTTGAGCGCCTTCGAGAAGAGCAGCGGCTCCTGCTTCTaGGCCGGGGCCCGTAACCAC +
Preference number: 4 (lower is better)
Translates to: NVGNGGFGIGTLSAFEKSSGSCF*AGARNH
Trigger: GTGGTTACGGGCCCCGGCGCAGAAGCAGGAGCCGCT...GCTCTTCTCGAAGGCGCTCAAGGTCCCGATCCCGAAGCCCCCATTACCGACATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp GCTGTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTTCCCGCTCCTTGGCTGGGGCTATGGCTaGGGCTGCGAGTCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: AVLAFPLFSLLLSAFPLLGWGYG*GCESGC
Trigger: GCAGCCTGACTCGCAGCCGCAGCCATAGCCCCAGCC...AAGGAGCGGGAACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR CCA 90 bp CGAAACTCTCTCCGCTGGCGTCGAGAGCGGCGTCCCGAGTACATGGCCTTCTCCGGGATGTGGTCCAGGTaGGCACGGACATCGAATCGG +
Preference number: 4 (lower is better)
Translates to: RNSLRWRRERRPEYMAFSGMWSR*ARTSNR
Trigger: CCGATTCGATGTCCGTGCCCACCTGGACCACATCCC...GGAGAAGGCCATGTACTCGGGACGCCGCTCTCGACGCCAGCGGAGAGAGTTTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587112.1
CDS-3UTR CCA 90 bp ACCCCTCAGCCGCTTCTCCCGAAACTCTCTCCGCTGGCGTCGAGAGCGGCGTCCTCTTCGCTGGGTCTCTaGAGGCCTCCGTACAACTCA +
Preference number: 4 (lower is better)
Translates to: TPQPLLPKLSPLASRAASSSLGL*RPPYNS
Trigger: TGAGTTGTACGGAGGCCTCCAGAGACCCAGCGAAGA...GGACGCCGCTCTCGACGCCAGCGGAGAGAGTTTCGGGAGAAGCGGCTGAGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587112.1
CDS-3UTR CCA 90 bp GCGGATCTTGCGGGCCATGGCTCGAAGCTCGTCTTCCCGCTCCTGCCGCTCATGGGCGTCCCGAGTACATaGCCTTCTCCTCCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: ADLAGHGSKLVFPLLPLMGVPST*PSPPQE
Trigger: CTCTTGAGGAGGAGAAGGCCATGTACTCGGGACGCC...CATGAGCGGCAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR CCA 90 bp CTCTGCCGGCTGTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTTCCCGAAACTCTCTCCGCTaGCGTCGAGAGCGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: LCRLYWRSHSSLSFSRRSRNSLR*RRERRP
Trigger: GGGACGCCGCTCTCGACGCCAGCGGAGAGAGTTTCG...GGAACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGCCGGCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR CCA 90 bp CTCCTTCATGCGGATCTTGCGGGCCATGGCTCGAAGCTCGTCTTCCCGCTCCTGGCGGGCATAGCTGGGTaGGCTGATCTTGCGACCCCT +
Preference number: 4 (lower is better)
Translates to: LLHADLAGHGSKLVFPLLAGIAG*ADLATP
Trigger: AGGGGTCGCAAGATCAGCCCACCCAGCTATGCCCGC...CAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGCATGAAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR CCA 90 bp AAACTCTCTCCGCTGGCGTCGAGAGCGGCGTCCCGAGTACATGGCCTTCTCCTCGCGGGCATAGCTGGGTaGGCTGATCTTGCGACCCCT +
Preference number: 4 (lower is better)
Translates to: KLSPLASRAASRVHGLLLAGIAG*ADLATP
Trigger: AGGGGTCGCAAGATCAGCCCACCCAGCTATGCCCGC...GAGGAGAAGGCCATGTACTCGGGACGCCGCTCTCGACGCCAGCGGAGAGAGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587112.1
CDS-3UTR CCA 90 bp GCGGATCTTGCGGGCCATGGCTCGAAGCTCGTCTTCCCGCTCCTGCCGCTCATGCTCTGCCGGCTGTACTaGCGTTCCCACTCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: ADLAGHGSKLVFPLLPLMLCRLY*RSHSSL
Trigger: GAGAGAAGAGTGGGAACGCCAGTACAGCCGGCAGAG...CATGAGCGGCAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR TCA 90 bp GCGGATCTTGCGGGCCATGGCTCGAAGCTCGTCTTCCCGCTCCTGCCGCTCATGTCGTGGCCTGTTTGTTaGGATCTGCCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: ADLAGHGSKLVFPLLPLMSWPVC*DLPPAP
Trigger: AGGAGCAGGTGGCAGATCTCAACAAACAGGCCACGA...CATGAGCGGCAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR TCA 90 bp CTCCTTCATGCGGATCTTGCGGGCCATGGCTCGAAGCTCGTCTTCCCGCTCCTGTCGGGATCGGGACCTTaGGCGCCTTCGAGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: LLHADLAGHGSKLVFPLLSGSGP*APSRRA
Trigger: AGCTCTTCTCGAAGGCGCTCAAGGTCCCGATCCCGA...CAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGCATGAAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR TCA 90 bp CGGCTCTGCCGGCTGTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTAGCAGCATCACAGCTTaGGCCCCTTACCCACCCCCT +
Preference number: 4 (lower is better)
Translates to: RLCRLYWRSHSSLSFSRRSSITA*APYPPP
Trigger: AGGGGGTGGGTAAGGGGCTCAAGCTGTGATGCTGCT...ACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGCCGGCAGAGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp GCGGATCTTGCGGGCCATGGCTCGAAGCTCGTCTTCCCGCTCCTGCCGCTCATGCTACCTCGGCCACCGTaGTGTCCTCGTAGGTATAAC +
Preference number: 4 (lower is better)
Translates to: ADLAGHGSKLVFPLLPLMLPRPP*CPRRYN
Trigger: GTTATACCTACGAGGACAGCACGGTGGCCGAGGTAG...CATGAGCGGCAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp CTTCATGCGGATCTTGCGGGCCATGGCTCGAAGCTCGTCTTCCCGCTCCTGCCGCTCCTCTGGCTTTTCTaGCGCCTTCTCTACCTCGGC +
Preference number: 4 (lower is better)
Translates to: LHADLAGHGSKLVFPLLPLLWLF*RLLYLG
Trigger: GCCGAGGTAGAGAAGGCGGCAGAAAAGCCAGAGGAG...CGGCAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGCATGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR CCA 90 bp GCTTCTCCCGAAACTCTCTCCGCTGGCGTCGAGAGCGGCGTCCCGAGTACATGGGGCGTCCCGAGTACATaGCCTTCTCCTCCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: ASPETLSAGVESGVPSTWGVPST*PSPPQE
Trigger: CTCTTGAGGAGGAGAAGGCCATGTACTCGGGACGCC...CCATGTACTCGGGACGCCGCTCTCGACGCCAGCGGAGAGAGTTTCGGGAGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587112.1
CDS-3UTR CCA 90 bp GTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTTCCCGCTCCTTCATCTGGGGCTGGGGCTATaGCTGCGGCTGCGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: VLAFPLFSLLLSAFPLLHLGLGL*LRLRVR
Trigger: CCTGACTCGCAGCCGCAGCCATAGCCCCAGCCCCAG...ATGAAGGAGCGGGAACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR TCA 90 bp CTCCTTCATGCGGATCTTGCGGGCCATGGCTCGAAGCTCGTCTTCCCGCTCCTGCAGGCACTGCTCCTCTaGGATGCCGGCAAAGTCGTT +
Preference number: 4 (lower is better)
Translates to: LLHADLAGHGSKLVFPLLQALLL*DAGKVV
Trigger: AACGACTTTGCCGGCATCTCAGAGGAGCAGTGCCTG...CAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGCATGAAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR TCA 90 bp CTCTGCCTCCTCCTTGTCTTTCCGGAGCATCCTGACGAAGTCACCGTCGGCCATCATAGCTGGGTGGGCTaGTCTTGCGACCCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LCLLLVFPEHPDEVTVGHHSWVG*SCDPSA
Trigger: GGCTGAGGGGTCGCAAGATCAGCCCACCCAGCTATG...ATGGCCGACGGTGACTTCGTCAGGATGCTCCGGAAAGACAAGGAGGAGGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587112.1
CDS-3UTR TCA 90 bp GTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTTCCCGCTCCTTCATCCCTGTGGTGACTCCTaGTGCTGCTGCGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VLAFPLFSLLLSAFPLLHPCGDS*CCCGSS
Trigger: GCTGCTGCCGCAGCAGCATCAGGAGTCACCACAGGG...ATGAAGGAGCGGGAACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp CGAAACTCTCTCCGCTGGCGTCGAGAGCGGCGTCCCGAGTACATGGCCTTCTCCACTGCAGAATCCAGGTaGACCTTGCAAGCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: RNSLRWRRERRPEYMAFSTAESR*TLQARP
Trigger: TGGCCGAGCTTGCAAGGTGCACCTGGATTCTGCAGT...GGAGAAGGCCATGTACTCGGGACGCCGCTCTCGACGCCAGCGGAGAGAGTTTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587112.1
CDS-3UTR GCA 90 bp GGTGGGCTGATCTTGCGACCCCTCAGCCGCTTCTCCCGAAACTCTCTCCGCTGGATCTGGTACAGGCACTaGTCCTCTGAGATGCCGGCA +
Preference number: 4 (lower is better)
Translates to: GGLILRPLSRFSRNSLRWIWYRH*SSEMPA
Trigger: TGCCGGCATCTCAGAGGAGCAGTGCCTGTACCAGAT...CCAGCGGAGAGAGTTTCGGGAGAAGCGGCTGAGGGGTCGCAAGATCAGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587112.1
CDS-3UTR GCA 90 bp GGTGGGCTGATCTTGCGACCCCTCAGCCGCTTCTCCCGAAACTCTCTCCGCTGGAGTCACCGTCGGCCATaGCATAAGTCGTGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: GGLILRPLSRFSRNSLRWSHRRP*HKSWPV
Trigger: AACAGGCCACGACTTATGGCATGGCCGACGGTGACT...CCAGCGGAGAGAGTTTCGGGAGAAGCGGCTGAGGGGTCGCAAGATCAGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587112.1
CDS-3UTR GCA 90 bp CTCCTTCATGCGGATCTTGCGGGCCATGGCTCGAAGCTCGTCTTCCCGCTCCTGCCTTCATGCGGATCTTaGGGGCCATGGCTCGAAGCT +
Preference number: 4 (lower is better)
Translates to: LLHADLAGHGSKLVFPLLPSCGS*GPWLEA
Trigger: AGCTTCGAGCCATGGCCCGCAAGATCCGCATGAAGG...CAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGCATGAAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR CCA 90 bp CTCCCGAAACTCTCTCCGCTGGCGTCGAGAGCGGCGTCCCGAGTACATGGCCTTGGTCAATCATGTTGTTaGTGTCCCCCTGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LPKLSPLASRAASRVHGLGQSCC*CPPARA
Trigger: TGCCCTGGCAGGGGGACACCAACAACATGATTGACC...AAGGCCATGTACTCGGGACGCCGCTCTCGACGCCAGCGGAGAGAGTTTCGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587112.1
CDS-3UTR CCA 90 bp GGTGGGCTGATCTTGCGACCCCTCAGCCGCTTCTCCCGAAACTCTCTCCGCTGGTCTTCTCATCTTCGCTaGGTCTCTGGAGGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: GGLILRPLSRFSRNSLRWSSHLR*VSGGLR
Trigger: ACGGAGGCCTCCAGAGACCCAGCGAAGATGAGAAGA...CCAGCGGAGAGAGTTTCGGGAGAAGCGGCTGAGGGGTCGCAAGATCAGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587112.1
CDS-3UTR CCA 90 bp GCGGATCTTGCGGGCCATGGCTCGAAGCTCGTCTTCCCGCTCCTGCCGCTCATGTCTGCCACCTGCTCCTaGTTCAATTCATCCACGTCC +
Preference number: 4 (lower is better)
Translates to: ADLAGHGSKLVFPLLPLMSATCS*FNSSTS
Trigger: GGACGTGGATGAATTGAACCAGGAGCAGGTGGCAGA...CATGAGCGGCAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR TCA 90 bp GCCTCTGCCTCCTCCTTGTCTTTCCGGAGCATCCTGACGAAGTCACCGTCGGCCTCGTGGCCTGTTTGTTaGGATCTGCCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: ASASSLSFRSILTKSPSASWPVC*DLPPAP
Trigger: AGGAGCAGGTGGCAGATCTCAACAAACAGGCCACGA...GGCCGACGGTGACTTCGTCAGGATGCTCCGGAAAGACAAGGAGGAGGCAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587112.1
ENST00000591410.5
CDS-3UTR TCA 90 bp CGGCTCTGCCGGCTGTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTAGTTTCAGCTTCTCCTaGGGCGTCAGCTTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: RLCRLYWRSHSSLSFSRRSFSFS*GVSLGD
Trigger: GTCACCCAAGCTGACGCCTCAGGAGAAGCTGAAACT...ACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGCCGGCAGAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp CCTAATGTCGGTAATGGGGGCTTCGGGATCGGGACCTTGAGCGCCTTCGAGAAGAGCGGCCAGGGCGACTaGAGAATCCAGGTGCACCTT +
Preference number: 4 (lower is better)
Translates to: PNVGNGGFGIGTLSAFEKSGQGD*RIQVHL
Trigger: AAGGTGCACCTGGATTCTGCAGTCGCCCTGGCCGCT...CTTCTCGAAGGCGCTCAAGGTCCCGATCCCGAAGCCCCCATTACCGACATTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp CTCTGCCTCCTCCTTGTCTTTCCGGAGCATCCTGACGAAGTCACCGTCGGCCATAGCGGCCAGGGCGACTaGAGAATCCAGGTGCACCTT +
Preference number: 4 (lower is better)
Translates to: LCLLLVFPEHPDEVTVGHSGQGD*RIQVHL
Trigger: AAGGTGCACCTGGATTCTGCAGTCGCCCTGGCCGCT...ATGGCCGACGGTGACTTCGTCAGGATGCTCCGGAAAGACAAGGAGGAGGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587112.1
CDS-3UTR GCA 90 bp GCTGTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTTCCCGCTCCTTCATCTTCGTCCGAGTTaGTCTCCTCCTCGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: AVLAFPLFSLLLSAFPLLHLRPS*SPPRPL
Trigger: CAGCGGCCGAGGAGGAGAGCAACTCGGACGAAGATG...AAGGAGCGGGAACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp ACCTCCACGTCGATGTCGGGGATGACCTCATCTTCGTCCGAGTTGCTCTCCTCCCATCTTCGTCCGAGTTaGTCTCCTCCTCGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: TSTSMSGMTSSSSELLSSHLRPS*SPPRPL
Trigger: CAGCGGCCGAGGAGGAGAGCAACTCGGACGAAGATG...GGAGGAGAGCAACTCGGACGAAGATGAGGTCATCCCCGACATCGACGTGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591410.5
CDS-3UTR GCA 90 bp GCTGTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTTCCCGCTCCTTGTTCCCGCTCCTTCATaGGGATCTTGCGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: AVLAFPLFSLLLSAFPLLVPAPS*GSCGPW
Trigger: CCATGGCCCGCAAGATCCGCATGAAGGAGCGGGAAC...AAGGAGCGGGAACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR CCA 90 bp GCTGTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTTCCCGCTCCTTGGGATGTGGTCCAGGTaGGCACGGACATCGAATCGG +
Preference number: 4 (lower is better)
Translates to: AVLAFPLFSLLLSAFPLLGMWSR*ARTSNR
Trigger: CCGATTCGATGTCCGTGCCCACCTGGACCACATCCC...AAGGAGCGGGAACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR CCA 90 bp CGGCTCTGCCGGCTGTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTTCTTCGCTGGGTCTCTaGAGGCCTCCGTACAACTCA +
Preference number: 4 (lower is better)
Translates to: RLCRLYWRSHSSLSFSRRSSLGL*RPPYNS
Trigger: TGAGTTGTACGGAGGCCTCCAGAGACCCAGCGAAGA...ACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGCCGGCAGAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR CCA 90 bp GCCTCTGCCTCCTCCTTGTCTTTCCGGAGCATCCTGACGAAGTCACCGTCGGCCTCTTCTCATCTTCGCTaGGTCTCTGGAGGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: ASASSLSFRSILTKSPSASSHLR*VSGGLR
Trigger: ACGGAGGCCTCCAGAGACCCAGCGAAGATGAGAAGA...GGCCGACGGTGACTTCGTCAGGATGCTCCGGAAAGACAAGGAGGAGGCAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587112.1
ENST00000591410.5
CDS-3UTR CCA 90 bp GGTGGGCTGATCTTGCGACCCCTCAGCCGCTTCTCCCGAAACTCTCTCCGCTGGTCTGCCACCTGCTCCTaGTTCAATTCATCCACGTCC +
Preference number: 4 (lower is better)
Translates to: GGLILRPLSRFSRNSLRWSATCS*FNSSTS
Trigger: GGACGTGGATGAATTGAACCAGGAGCAGGTGGCAGA...CCAGCGGAGAGAGTTTCGGGAGAAGCGGCTGAGGGGTCGCAAGATCAGCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587112.1
CDS-3UTR TCA 90 bp GCTGTCTCGGCGGGCATAGCTGGGTGGGCTGATCTTGCGACCCCTCAGCCGCTTGGGCTGGGTCCTTCTTaGTCTTTTCATAATACTCCC +
Preference number: 4 (lower is better)
Translates to: AVSAGIAGWADLATPQPLGLGPS*SFHNTP
Trigger: GGGAGTATTATGAAAAGATCAAGAAGGACCCAGCCC...AAGCGGCTGAGGGGTCGCAAGATCAGCCCACCCAGCTATGCCCGCCGAGACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587112.1
CDS-3UTR TCA 90 bp GTCTTTCCGGAGCATCCTGACGAAGTCACCGTCGGCCATGCCATAAGTCGTGGCCAGGCACTGCTCCTCTaGGATGCCGGCAAAGTCGTT +
Preference number: 4 (lower is better)
Translates to: VFPEHPDEVTVGHAISRGQALLL*DAGKVV
Trigger: AACGACTTTGCCGGCATCTCAGAGGAGCAGTGCCTG...GCCACGACTTATGGCATGGCCGACGGTGACTTCGTCAGGATGCTCCGGAAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587112.1
CDS-3UTR TCA 90 bp AATGTCGGTAATGGGGGCTTCGGGATCGGGACCTTGAGCGCCTTCGAGAAGAGCCGTCGATGTCGGGGATaGCCTCATCTTCGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: NVGNGGFGIGTLSAFEKSRRCRG*PHLRPS
Trigger: ACTCGGACGAAGATGAGGTCATCCCCGACATCGACG...GCTCTTCTCGAAGGCGCTCAAGGTCCCGATCCCGAAGCCCCCATTACCGACATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp CCTAATGTCGGTAATGGGGGCTTCGGGATCGGGACCTTGAGCGCCTTCGAGAAGTGCTTCCGAGCCTCGTaGCACATTGTGGTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: PNVGNGGFGIGTLSAFEKCFRAS*HIVVRP
Trigger: TGGCCTCACCACAATGTGGCACGAGGCTCGGAAGCA...CTTCTCGAAGGCGCTCAAGGTCCCGATCCCGAAGCCCCCATTACCGACATTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp CGGCTCTGCCGGCTGTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTAATCCAGGTGCACCTTaGAAGCTCGGCCATGTACCT +
Preference number: 4 (lower is better)
Translates to: RLCRLYWRSHSSLSFSRRNPGAP*KLGHVP
Trigger: AGGTACATGGCCGAGCTTGCAAGGTGCACCTGGATT...ACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGCCGGCAGAGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp CTCTGCCGGCTGTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTTCCATCTGGTACAGGCACTaGTCCTCTGAGATGCCGGCA +
Preference number: 4 (lower is better)
Translates to: LCRLYWRSHSSLSFSRRSIWYRH*SSEMPA
Trigger: TGCCGGCATCTCAGAGGAGCAGTGCCTGTACCAGAT...GGAACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGCCGGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp CTCTGCCTCCTCCTTGTCTTTCCGGAGCATCCTGACGAAGTCACCGTCGGCCATCTCCTCTGGCTTTTCTaGCGCCTTCTCTACCTCGGC +
Preference number: 4 (lower is better)
Translates to: LCLLLVFPEHPDEVTVGHLLWLF*RLLYLG
Trigger: GCCGAGGTAGAGAAGGCGGCAGAAAAGCCAGAGGAG...ATGGCCGACGGTGACTTCGTCAGGATGCTCCGGAAAGACAAGGAGGAGGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587112.1
ENST00000591410.5
CDS-3UTR GCA 90 bp CGGCTCTGCCGGCTGTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTATGCTTGATGGCCTCTaGCTCCTCCTTGTCTTTCCG +
Preference number: 4 (lower is better)
Translates to: RLCRLYWRSHSSLSFSRRMLDGL*LLLVFP
Trigger: CGGAAAGACAAGGAGGAGGCAGAGGCCATCAAGCAT...ACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGCCGGCAGAGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp GCCTCTGCCTCCTCCTTGTCTTTCCGGAGCATCCTGACGAAGTCACCGTCGGCCATGCTTGATGGCCTCTaGCTCCTCCTTGTCTTTCCG +
Preference number: 4 (lower is better)
Translates to: ASASSLSFRSILTKSPSAMLDGL*LLLVFP
Trigger: CGGAAAGACAAGGAGGAGGCAGAGGCCATCAAGCAT...GGCCGACGGTGACTTCGTCAGGATGCTCCGGAAAGACAAGGAGGAGGCAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587112.1
ENST00000591410.5
CDS-3UTR CCA 90 bp TCTTGCGACCCCTCAGCCGCTTCTCCCGAAACTCTCTCCGCTGGCGTCGAGAGCCTGCAGGAACTGGGCTaGGTCCTTCTTGATCTTTTC +
Preference number: 4 (lower is better)
Translates to: SCDPSAASPETLSAGVESLQELG*VLLDLF
Trigger: GAAAAGATCAAGAAGGACCCAGCCCAGTTCCTGCAG...GCTCTCGACGCCAGCGGAGAGAGTTTCGGGAGAAGCGGCTGAGGGGTCGCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587112.1
CDS-3UTR CCA 90 bp CTCTGCCGGCTGTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTTCCGGTCAATCATGTTGTTaGTGTCCCCCTGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LCRLYWRSHSSLSFSRRSGQSCC*CPPARA
Trigger: TGCCCTGGCAGGGGGACACCAACAACATGATTGACC...GGAACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGCCGGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR CCA 90 bp CTCTGCCTCCTCCTTGTCTTTCCGGAGCATCCTGACGAAGTCACCGTCGGCCATGTCCGACTCCTGTTCTaGGGAGATGGTGGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: LCLLLVFPEHPDEVTVGHVRLLF*GDGGEQ
Trigger: CTGCTCACCACCATCTCCCCAGAACAGGAGTCGGAC...ATGGCCGACGGTGACTTCGTCAGGATGCTCCGGAAAGACAAGGAGGAGGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587112.1
CDS-3UTR CCA 90 bp GTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTTCCCGCTCCTTCATGGATCTTGCGGGCCATaGCTCGAAGCTCGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: VLAFPLFSLLLSAFPLLHGSCGP*LEARLP
Trigger: GGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCC...ATGAAGGAGCGGGAACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp AATGTCGGTAATGGGGGCTTCGGGATCGGGACCTTGAGCGCCTTCGAGAAGAGCACTGCAGAATCCAGGTaGACCTTGCAAGCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: NVGNGGFGIGTLSAFEKSTAESR*TLQARP
Trigger: TGGCCGAGCTTGCAAGGTGCACCTGGATTCTGCAGT...GCTCTTCTCGAAGGCGCTCAAGGTCCCGATCCCGAAGCCCCCATTACCGACATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp CTTCATGCGGATCTTGCGGGCCATGGCTCGAAGCTCGTCTTCCCGCTCCTGCCGTTGTTGGTGTCCCCCTaGCAGGGCATCATATTAACA +
Preference number: 4 (lower is better)
Translates to: LHADLAGHGSKLVFPLLPLLVSP*QGIILT
Trigger: TGTTAATATGATGCCCTGGCAGGGGGACACCAACAA...CGGCAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGCATGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp CTGGGTGGGCTGATCTTGCGACCCCTCAGCCGCTTCTCCCGAAACTCTCTCCGCGGAAGCCTTCTTCTCTaGCAGCTTCTTCTTCTCATC +
Preference number: 4 (lower is better)
Translates to: LGGLILRPLSRFSRNSLRGSLLL*QLLLLI
Trigger: GATGAGAAGAAGAAGCTGGCAGAGAAGAAGGCTTCC...GCGGAGAGAGTTTCGGGAGAAGCGGCTGAGGGGTCGCAAGATCAGCCCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587112.1
CDS-3UTR GCA 90 bp ACGTCCACCTCCACGTCGATGTCGGGGATGACCTCATCTTCGTCCGAGTTGCTCCTACCTCGGCCACCGTaGTGTCCTCGTAGGTATAAC +
Preference number: 4 (lower is better)
Translates to: TSTSTSMSGMTSSSSELLLPRPP*CPRRYN
Trigger: GTTATACCTACGAGGACAGCACGGTGGCCGAGGTAG...GAGCAACTCGGACGAAGATGAGGTCATCCCCGACATCGACGTGGAGGTGGACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591410.5
CDS-3UTR GCA 90 bp GCTGTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTTCCCGCTCCTTAGTCACCGTCGGCCATaGCATAAGTCGTGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: AVLAFPLFSLLLSAFPLLSHRRP*HKSWPV
Trigger: AACAGGCCACGACTTATGGCATGGCCGACGGTGACT...AAGGAGCGGGAACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp GTCTTTCCGGAGCATCCTGACGAAGTCACCGTCGGCCATGCCATAAGTCGTGGCAGTCACCGTCGGCCATaGCATAAGTCGTGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: VFPEHPDEVTVGHAISRGSHRRP*HKSWPV
Trigger: AACAGGCCACGACTTATGGCATGGCCGACGGTGACT...GCCACGACTTATGGCATGGCCGACGGTGACTTCGTCAGGATGCTCCGGAAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587112.1
ENST00000591410.5
CDS-3UTR GCA 90 bp GCTGTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTTCCCGCTCCTTTCAAGAGCCTTGGCATaGTTGATGGCCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: AVLAFPLFSLLLSAFPLLSRALA*LMASAS
Trigger: GGAGGCAGAGGCCATCAAGCATGCCAAGGCTCTTGA...AAGGAGCGGGAACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp CTCCTTCATGCGGATCTTGCGGGCCATGGCTCGAAGCTCGTCTTCCCGCTCCTGCTGTTCAGCGCCTTCTaGATCCTCAGTTTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LLHADLAGHGSKLVFPLLLFSAF*ILSFSF
Trigger: GAAGCTGAAACTGAGGATGCAGAAGGCGCTGAACAG...CAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGCATGAAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp CCTAATGTCGGTAATGGGGGCTTCGGGATCGGGACCTTGAGCGCCTTCGAGAAGCGCTCCTGCCGCTCATaGTCCTGCTGGATCATCTTT +
Preference number: 4 (lower is better)
Translates to: PNVGNGGFGIGTLSAFEKRSCRS*SCWIIF
Trigger: AAAGATGATCCAGCAGGAGCATGAGCGGCAGGAGCG...CTTCTCGAAGGCGCTCAAGGTCCCGATCCCGAAGCCCCCATTACCGACATTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR CCA 90 bp GTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTTCCCGCTCCTTCATGTCCGACTCCTGTTCTaGGGAGATGGTGGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: VLAFPLFSLLLSAFPLLHVRLLF*GDGGEQ
Trigger: CTGCTCACCACCATCTCCCCAGAACAGGAGTCGGAC...ATGAAGGAGCGGGAACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR CCA 90 bp CCTAATGTCGGTAATGGGGGCTTCGGGATCGGGACCTTGAGCGCCTTCGAGAAGTCTTCTCATCTTCGCTaGGTCTCTGGAGGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: PNVGNGGFGIGTLSAFEKSSHLR*VSGGLR
Trigger: ACGGAGGCCTCCAGAGACCCAGCGAAGATGAGAAGA...CTTCTCGAAGGCGCTCAAGGTCCCGATCCCGAAGCCCCCATTACCGACATTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR TCA 90 bp GTCACCGTCGGCCATGCCATAAGTCGTGGCCTGTTTGTTGAGATCTGCCACCTGTCGTGGCCTGTTTGTTaGGATCTGCCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: VTVGHAISRGLFVEICHLSWPVC*DLPPAP
Trigger: AGGAGCAGGTGGCAGATCTCAACAAACAGGCCACGA...CAGGTGGCAGATCTCAACAAACAGGCCACGACTTATGGCATGGCCGACGGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587112.1
ENST00000591410.5
CDS-3UTR GCA 90 bp CATCCTGACGAAGTCACCGTCGGCCATGCCATAAGTCGTGGCCTGTTTGTTGAGTGCTTCCGAGCCTCGTaGCACATTGTGGTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: HPDEVTVGHAISRGLFVECFRAS*HIVVRP
Trigger: TGGCCTCACCACAATGTGGCACGAGGCTCGGAAGCA...CTCAACAAACAGGCCACGACTTATGGCATGGCCGACGGTGACTTCGTCAGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591410.5
CDS-3UTR GCA 90 bp GGCCTCTGCCTCCTCCTTGTCTTTCCGGAGCATCCTGACGAAGTCACCGTCGGCTTGTTGGTGTCCCCCTaGCAGGGCATCATATTAACA +
Preference number: 4 (lower is better)
Translates to: GLCLLLVFPEHPDEVTVGLLVSP*QGIILT
Trigger: TGTTAATATGATGCCCTGGCAGGGGGACACCAACAA...GCCGACGGTGACTTCGTCAGGATGCTCCGGAAAGACAAGGAGGAGGCAGAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587112.1
CDS-3UTR GCA 90 bp CCTGACGAAGTCACCGTCGGCCATGCCATAAGTCGTGGCCTGTTTGTTGAGATCCTCCTCTGGCTTTTCTaGCGCCTTCTCTACCTCGGC +
Preference number: 4 (lower is better)
Translates to: PDEVTVGHAISRGLFVEILLWLF*RLLYLG
Trigger: GCCGAGGTAGAGAAGGCGGCAGAAAAGCCAGAGGAG...GATCTCAACAAACAGGCCACGACTTATGGCATGGCCGACGGTGACTTCGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587112.1
ENST00000591410.5
CDS-3UTR GCA 90 bp CGGCTCTGCCGGCTGTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTCTGTTTGTTGAGATCTaGCACCTGCTCCTGGTTCAA +
Preference number: 4 (lower is better)
Translates to: RLCRLYWRSHSSLSFSRRLFVEI*HLLLVQ
Trigger: TTGAACCAGGAGCAGGTGGCAGATCTCAACAAACAG...ACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGCCGGCAGAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp ACCTCCACGTCGATGTCGGGGATGACCTCATCTTCGTCCGAGTTGCTCTCCTCCATGCTTGATGGCCTCTaGCTCCTCCTTGTCTTTCCG +
Preference number: 4 (lower is better)
Translates to: TSTSMSGMTSSSSELLSSMLDGL*LLLVFP
Trigger: CGGAAAGACAAGGAGGAGGCAGAGGCCATCAAGCAT...GGAGGAGAGCAACTCGGACGAAGATGAGGTCATCCCCGACATCGACGTGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591410.5
CDS-3UTR CCA 90 bp CCTAATGTCGGTAATGGGGGCTTCGGGATCGGGACCTTGAGCGCCTTCGAGAAGTGTACCTGCAGGAACTaGGCTGGGTCCTTCTTGATC +
Preference number: 4 (lower is better)
Translates to: PNVGNGGFGIGTLSAFEKCTCRN*AGSFLI
Trigger: GATCAAGAAGGACCCAGCCCAGTTCCTGCAGGTACA...CTTCTCGAAGGCGCTCAAGGTCCCGATCCCGAAGCCCCCATTACCGACATTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp GCCATAAGTCGTGGCCTGTTTGTTGAGATCTGCCACCTGCTCCTGGTTCAATTCCGAAGCTTCCGCTCATaGTTCCGAGCCTCGTGCCAC +
Preference number: 4 (lower is better)
Translates to: AISRGLFVEICHLLLVQFRSFRS*FRASCH
Trigger: GTGGCACGAGGCTCGGAAGCATGAGCGGAAGCTTCG...GAATTGAACCAGGAGCAGGTGGCAGATCTCAACAAACAGGCCACGACTTATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591410.5
CDS-3UTR CCA 90 bp GCTGTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTTCCCGCTCCTTCTGCAGGAACTGGGCTaGGTCCTTCTTGATCTTTTC +
Preference number: 4 (lower is better)
Translates to: AVLAFPLFSLLLSAFPLLLQELG*VLLDLF
Trigger: GAAAAGATCAAGAAGGACCCAGCCCAGTTCCTGCAG...AAGGAGCGGGAACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR CCA 90 bp GACGAAGTCACCGTCGGCCATGCCATAAGTCGTGGCCTGTTTGTTGAGATCTGCTCTTCGCTGGGTCTCTaGAGGCCTCCGTACAACTCA +
Preference number: 4 (lower is better)
Translates to: DEVTVGHAISRGLFVEICSSLGL*RPPYNS
Trigger: TGAGTTGTACGGAGGCCTCCAGAGACCCAGCGAAGA...GCAGATCTCAACAAACAGGCCACGACTTATGGCATGGCCGACGGTGACTTCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587112.1
ENST00000591410.5
CDS-3UTR CCA 90 bp CCTAATGTCGGTAATGGGGGCTTCGGGATCGGGACCTTGAGCGCCTTCGAGAAGCGCTCATGCTCCTGCTaGATCATCTTTTCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: PNVGNGGFGIGTLSAFEKRSCSC*IIFSCA
Trigger: GGCACAAGAAAAGATGATCCAGCAGGAGCATGAGCG...CTTCTCGAAGGCGCTCAAGGTCCCGATCCCGAAGCCCCCATTACCGACATTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR TCA 90 bp GCTGTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTTCCCGCTCCTTGGGCTGGGTCCTTCTTaGTCTTTTCATAATACTCCC +
Preference number: 4 (lower is better)
Translates to: AVLAFPLFSLLLSAFPLLGLGPS*SFHNTP
Trigger: GGGAGTATTATGAAAAGATCAAGAAGGACCCAGCCC...AAGGAGCGGGAACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp GTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTTCCCGCTCCTTCATTGTAGTCGACCATCATaGCTCGAAGCTTCCGCTCAT +
Preference number: 4 (lower is better)
Translates to: VLAFPLFSLLLSAFPLLHCSRPS*LEASAH
Trigger: ATGAGCGGAAGCTTCGAGGCATGATGGTCGACTACA...ATGAAGGAGCGGGAACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp CCTGACGAAGTCACCGTCGGCCATGCCATAAGTCGTGGCCTGTTTGTTGAGATCAATCCAGGTGCACCTTaGAAGCTCGGCCATGTACCT +
Preference number: 4 (lower is better)
Translates to: PDEVTVGHAISRGLFVEINPGAP*KLGHVP
Trigger: AGGTACATGGCCGAGCTTGCAAGGTGCACCTGGATT...GATCTCAACAAACAGGCCACGACTTATGGCATGGCCGACGGTGACTTCGTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587112.1
CDS-3UTR GCA 90 bp CCTAATGTCGGTAATGGGGGCTTCGGGATCGGGACCTTGAGCGCCTTCGAGAAGGGAAGCCTTCTTCTCTaGCAGCTTCTTCTTCTCATC +
Preference number: 4 (lower is better)
Translates to: PNVGNGGFGIGTLSAFEKGSLLL*QLLLLI
Trigger: GATGAGAAGAAGAAGCTGGCAGAGAAGAAGGCTTCC...CTTCTCGAAGGCGCTCAAGGTCCCGATCCCGAAGCCCCCATTACCGACATTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp TCCACGTCCACCTCCACGTCGATGTCGGGGATGACCTCATCTTCGTCCGAGTTGCTGTTTGTTGAGATCTaGCACCTGCTCCTGGTTCAA +
Preference number: 4 (lower is better)
Translates to: STSTSTSMSGMTSSSSELLFVEI*HLLLVQ
Trigger: TTGAACCAGGAGCAGGTGGCAGATCTCAACAAACAG...CAACTCGGACGAAGATGAGGTCATCCCCGACATCGACGTGGAGGTGGACGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591410.5
CDS-3UTR CCA 90 bp CCTAATGTCGGTAATGGGGGCTTCGGGATCGGGACCTTGAGCGCCTTCGAGAAGCGTAGGTATAACCGATaGAAGCCTTCTTCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: PNVGNGGFGIGTLSAFEKRRYNR*KPSSLP
Trigger: TGGCAGAGAAGAAGGCTTCCATCGGTTATACCTACG...CTTCTCGAAGGCGCTCAAGGTCCCGATCCCGAAGCCCCCATTACCGACATTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR CCA 90 bp TCCACGTCCACCTCCACGTCGATGTCGGGGATGACCTCATCTTCGTCCGAGTTGCGTAGGTATAACCGATaGAAGCCTTCTTCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: STSTSTSMSGMTSSSSELRRYNR*KPSSLP
Trigger: TGGCAGAGAAGAAGGCTTCCATCGGTTATACCTACG...CAACTCGGACGAAGATGAGGTCATCCCCGACATCGACGTGGAGGTGGACGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591410.5
CDS-3UTR GCA 90 bp GTCACCGTCGGCCATGCCATAAGTCGTGGCCTGTTTGTTGAGATCTGCCACCTGGGAAGCCTTCTTCTCTaGCAGCTTCTTCTTCTCATC +
Preference number: 4 (lower is better)
Translates to: VTVGHAISRGLFVEICHLGSLLL*QLLLLI
Trigger: GATGAGAAGAAGAAGCTGGCAGAGAAGAAGGCTTCC...CAGGTGGCAGATCTCAACAAACAGGCCACGACTTATGGCATGGCCGACGGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587112.1
ENST00000591410.5
CDS-3UTR GCA 90 bp GTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTTCCCGCTCCTTCATTTGAGATCTGCCACCTaGTCCTGGTTCAATTCATCC +
Preference number: 4 (lower is better)
Translates to: VLAFPLFSLLLSAFPLLHLRSAT*SWFNSS
Trigger: GGATGAATTGAACCAGGAGCAGGTGGCAGATCTCAA...ATGAAGGAGCGGGAACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR GCA 90 bp CACCTGCTCCTGGTTCAATTCATCCACGTCCACCTCCACGTCGATGTCGGGGATTTGAGATCTGCCACCTaGTCCTGGTTCAATTCATCC +
Preference number: 4 (lower is better)
Translates to: HLLLVQFIHVHLHVDVGDLRSAT*SWFNSS
Trigger: GGATGAATTGAACCAGGAGCAGGTGGCAGATCTCAA...ATCCCCGACATCGACGTGGAGGTGGACGTGGATGAATTGAACCAGGAGCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591410.5
CDS-3UTR CCA 90 bp GTCACCGTCGGCCATGCCATAAGTCGTGGCCTGTTTGTTGAGATCTGCCACCTGCGTAGGTATAACCGATaGAAGCCTTCTTCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: VTVGHAISRGLFVEICHLRRYNR*KPSSLP
Trigger: TGGCAGAGAAGAAGGCTTCCATCGGTTATACCTACG...CAGGTGGCAGATCTCAACAAACAGGCCACGACTTATGGCATGGCCGACGGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587112.1
ENST00000591410.5
CDS-3UTR GCA 90 bp GACGAAGTCACCGTCGGCCATGCCATAAGTCGTGGCCTGTTTGTTGAGATCTGCTTGAGATCTGCCACCTaGTCCTGGTTCAATTCATCC +
Preference number: 4 (lower is better)
Translates to: DEVTVGHAISRGLFVEICLRSAT*SWFNSS
Trigger: GGATGAATTGAACCAGGAGCAGGTGGCAGATCTCAA...GCAGATCTCAACAAACAGGCCACGACTTATGGCATGGCCGACGGTGACTTCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587112.1
ENST00000591410.5
CDS-3UTR GCA 90 bp GACGAAGTCACCGTCGGCCATGCCATAAGTCGTGGCCTGTTTGTTGAGATCTGCCTGTTTGTTGAGATCTaGCACCTGCTCCTGGTTCAA +
Preference number: 4 (lower is better)
Translates to: DEVTVGHAISRGLFVEICLFVEI*HLLLVQ
Trigger: TTGAACCAGGAGCAGGTGGCAGATCTCAACAAACAG...GCAGATCTCAACAAACAGGCCACGACTTATGGCATGGCCGACGGTGACTTCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587112.1
ENST00000591410.5
CDS-3UTR GCA 90 bp GTCGGCCATGCCATAAGTCGTGGCCTGTTTGTTGAGATCTGCCACCTGCTCCTGATCTGGTACAGGCACTaGTCCTCTGAGAGATCTTTT +
Preference number: 4 (lower is better)
Translates to: VGHAISRGLFVEICHLLLIWYRH*SSERSF
Trigger: AAAAGATCTCTCAGAGGAGCAGTGCCTGTACCAGAT...CAGGAGCAGGTGGCAGATCTCAACAAACAGGCCACGACTTATGGCATGGCCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591410.5
CDS-3UTR CCA 90 bp CATGCCATAAGTCGTGGCCTGTTTGTTGAGATCTGCCACCTGCTCCTGGTTCAATCTGCCACCTGCTCCTaGTTCAATTCATCCACGTCC +
Preference number: 4 (lower is better)
Translates to: HAISRGLFVEICHLLLVQSATCS*FNSSTS
Trigger: GGACGTGGATGAATTGAACCAGGAGCAGGTGGCAGA...TTGAACCAGGAGCAGGTGGCAGATCTCAACAAACAGGCCACGACTTATGGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591410.5
CDS TCA 90 bp GGCGGGCGAGCGGGAGTACCGGTGTCCGTCTCGGGAGCCCCCACCTaGGTGCCGCCGGCCACGGCTACGGGACCGGGAATAGCGCCGGGA +
Preference number: 5 (lower is better)
Translates to: GGRAGVPVSVSGAPT*VPPATATGPGIAPG
Trigger: TCCCGGCGCTATTCCCGGTCCCGTAGCCGTGGCCGGCGGCACTCAGGTGGGGGCTCCCGAGACGGACACCGGTACTCCCGCTCGCCCGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221455.8
ENST00000391952.7
ENST00000391953.8
ENST00000544944.6
CDS CCA 90 bp GCCGGCCTGGTCAGCTTCTCTCTTGCGGGTGATGGCGAGGGGCTCTaGCTGCGGCTGCGGCTGCGGCTGCGGCTCTGGCTGGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: AGLVSFSLAGDGEGL*LRLRLRLRLWLGLG
Trigger: CCCCAGCCCCAGCCAGAGCCGCAGCCGCAGCCGCAGCCGCAGCCAGAGCCCCTCGCCATCACCCGCAAGAGAGAAGCTGACCAGGCCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221455.8
ENST00000391952.7
ENST00000391953.8
ENST00000544944.6
ENST00000585432.1
CDS-3UTR CAA 90 bp GCGGATCTTGCGGGCCATGGCTCGAAGCTCGTCTTCCCGCTCCTGCCGCTCATGCTGGGTGGGCTGATCTaGCGACCCCTCAGCCGCTTC +
Preference number: 5 (lower is better)
Translates to: ADLAGHGSKLVFPLLPLMLGGLI*RPLSRF
Trigger: GAAGCGGCTGAGGGGTCGCAAGATCAGCCCACCCAG...CATGAGCGGCAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS GCA 90 bp CAGGGCTCTCAGCGGCCAGGGCGACTGCAGAATCCAGGTGCACCTTaGAAGCTCGGCCATGTACCTGCAGGAACTGGGCTGGGTCCTTCT +
Preference number: 5 (lower is better)
Translates to: QGSQRPGRLQNPGAP*KLGHVPAGTGLGPS
Trigger: AGAAGGACCCAGCCCAGTTCCTGCAGGTACATGGCCGAGCTTGCAAGGTGCACCTGGATTCTGCAGTCGCCCTGGCCGCTGAGAGCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221455.8
ENST00000391952.7
ENST00000544944.6
ENST00000587112.1
ENST00000588936.5
ENST00000592056.5
CDS-3UTR CAA 90 bp CTTCATGCGGATCTTGCGGGCCATGGCTCGAAGCTCGTCTTCCCGCTCCTGCCGGCCTCTGCCTCCTCCTaGTCTTTCCGGAGCATCCTG +
Preference number: 5 (lower is better)
Translates to: LHADLAGHGSKLVFPLLPASASS*SFRSIL
Trigger: CAGGATGCTCCGGAAAGACAAGGAGGAGGCAGAGGC...CGGCAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGCATGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR CAA 90 bp GCTGATCTTGCGACCCCTCAGCCGCTTCTCCCGAAACTCTCTCCGCTGGCGTCGAGAGCCTTGGCATGCTaGATGGCCTCTGCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: ADLATPQPLLPKLSPLASRALAC*MASASS
Trigger: GGAGGAGGCAGAGGCCATCAAGCATGCCAAGGCTCT...CGACGCCAGCGGAGAGAGTTTCGGGAGAAGCGGCTGAGGGGTCGCAAGATCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587112.1
CDS-3UTR CAA 90 bp CGGCTCTGCCGGCTGTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTTGGTCAGCTTCTCTCTaGCGGGTGATGGCGAGGGGC +
Preference number: 5 (lower is better)
Translates to: RLCRLYWRSHSSLSFSRRWSASL*RVMARG
Trigger: GCCCCTCGCCATCACCCGCAAGAGAGAAGCTGACCA...ACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGCCGGCAGAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR CAA 90 bp CTTCATGCGGATCTTGCGGGCCATGGCTCGAAGCTCGTCTTCCCGCTCCTGCCGTTCGGGATCGGGACCTaGAGCGCCTTCGAGAAGAGC +
Preference number: 5 (lower is better)
Translates to: LHADLAGHGSKLVFPLLPFGIGT*SAFEKS
Trigger: GCTCTTCTCGAAGGCGCTCAAGGTCCCGATCCCGAA...CGGCAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGCATGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR CAA 90 bp CTCCTTCATGCGGATCTTGCGGGCCATGGCTCGAAGCTCGTCTTCCCGCTCCTGCAGCAGCATCACAGCTaGAGCCCCTTACCCACCCCC +
Preference number: 5 (lower is better)
Translates to: LLHADLAGHGSKLVFPLLQQHHS*SPLPTP
Trigger: GGGGGTGGGTAAGGGGCTCAAGCTGTGATGCTGCTG...CAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGCATGAAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS GCA 90 bp TCGACCATCATGCCTCGAAGCTTCCGCTCATGCTTCCGAGCCTCGTaGCACATTGTGGTGAGGCCAAGCCTGGGGCCTCAACCGGCTGGT +
Preference number: 5 (lower is better)
Translates to: STIMPRSFRSCFRAS*HIVVRPSLGPQPAG
Trigger: ACCAGCCGGTTGAGGCCCCAGGCTTGGCCTCACCACAATGTGGCACGAGGCTCGGAAGCATGAGCGGAAGCTTCGAGGCATGATGGTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221455.8
ENST00000391952.7
ENST00000391953.8
ENST00000588247.5
ENST00000591410.5
ENST00000592056.5
CDS CCA 90 bp TTCTCTCGGCGTTCCCGCTCCCTGCGAAGGCATGGCATGAGCATCTaGCCGGGAACACTGGACACACTGAACTCAGGGAGGGCAGGTGCT +
Preference number: 5 (lower is better)
Translates to: FSRRSRSLRRHGMSI*PGTLDTLNSGRAGA
Trigger: AGCACCTGCCCTCCCTGAGTTCAGTGTGTCCAGTGTTCCCGGCCAGATGCTCATGCCATGCCTTCGCAGGGAGCGGGAACGCCGAGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588070.1
ENST00000591904.1
ENST00000592876.1
CDS-3UTR CAA 90 bp CTCCTTCATGCGGATCTTGCGGGCCATGGCTCGAAGCTCGTCTTCCCGCTCCTGCGGTCAATCATGTTGTaGGTGTCCCCCTGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: LLHADLAGHGSKLVFPLLRSIML*VSPCQG
Trigger: GCCCTGGCAGGGGGACACCAACAACATGATTGACCG...CAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGCATGAAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR CAA 90 bp AAACTCTCTCCGCTGGCGTCGAGAGCGGCGTCCCGAGTACATGGCCTTCTCCTCCGGTCAATCATGTTGTaGGTGTCCCCCTGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: KLSPLASRAASRVHGLLLRSIML*VSPCQG
Trigger: GCCCTGGCAGGGGGACACCAACAACATGATTGACCG...GAGGAGAAGGCCATGTACTCGGGACGCCGCTCTCGACGCCAGCGGAGAGAGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587112.1
CDS-3UTR CAA 90 bp CGGCTCTGCCGGCTGTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTTCCTTCATGCGGATCTaGCGGGCCATGGCTCGAAGC +
Preference number: 5 (lower is better)
Translates to: RLCRLYWRSHSSLSFSRRSFMRI*RAMARS
Trigger: GCTTCGAGCCATGGCCCGCAAGATCCGCATGAAGGA...ACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGCCGGCAGAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS GCA 90 bp TCGACCATCATGCCTCGAAGCTTCCGCTCATGCTTCCGAGCCTCGTaGCACATTGTGGTGAGGCCAAGCCTGGGGCCTCAACCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: STIMPRSFRSCFRAS*HIVVRPSLGPQPEG
Trigger: TCCCTCAGGTTGAGGCCCCAGGCTTGGCCTCACCACAATGTGGCACGAGGCTCGGAAGCATGAGCGGAAGCTTCGAGGCATGATGGTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544944.6
ENST00000588936.5
CDS GCA 90 bp ATATTAACAGGGCTCTCAGCGGCCAGGGCGACTGCAGAATCCAGGTaGACCTTGCAAGCTCGGCCATGTACCTGCAGGAACTGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: ILTGLSAARATAESR*TLQARPCTCRNWAG
Trigger: CCCAGCCCAGTTCCTGCAGGTACATGGCCGAGCTTGCAAGGTGCACCTGGATTCTGCAGTCGCCCTGGCCGCTGAGAGCCCTGTTAATAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221455.8
ENST00000391952.7
ENST00000544944.6
ENST00000587112.1
ENST00000588936.5
ENST00000592056.5
CDS GCA 90 bp CTGCCAGGGCATCATATTAACAGGGCTCTCAGCGGCCAGGGCGACTaGAGAATCCAGGTGCACCTTGCAAGCTCGGCCATGTACCTGCAG +
Preference number: 5 (lower is better)
Translates to: LPGHHINRALSGQGD*RIQVHLASSAMYLQ
Trigger: CTGCAGGTACATGGCCGAGCTTGCAAGGTGCACCTGGATTCTGCAGTCGCCCTGGCCGCTGAGAGCCCTGTTAATATGATGCCCTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221455.8
ENST00000391952.7
ENST00000544944.6
ENST00000587112.1
ENST00000588936.5
ENST00000592056.5
CDS CCA 90 bp CTCTTCTCTCTCCTTCTCTCGGCGTTCCCGCTCCCTGCGAAGGCATaGCATGAGCATCTGGCCGGGAACACTGGACACACTGAACTCAGG +
Preference number: 5 (lower is better)
Translates to: LFSLLLSAFPLPAKA*HEHLAGNTGHTELR
Trigger: CCTGAGTTCAGTGTGTCCAGTGTTCCCGGCCAGATGCTCATGCCATGCCTTCGCAGGGAGCGGGAACGCCGAGAGAAGGAGAGAGAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588070.1
ENST00000591904.1
ENST00000592876.1
CDS CCA 90 bp GAAGGATGTTCCCCAAGGGATGAGACCAGCCCCTCCAACTGGAGGTaGGTACAGGGTGAGGCTGGAGGAATGACAGCCAGGACCTCCCAT +
Preference number: 5 (lower is better)
Translates to: EGCSPRDETSPSNWR*VQGEAGGMTARTSH
Trigger: ATGGGAGGTCCTGGCTGTCATTCCTCCAGCCTCACCCTGTACCCACCTCCAGTTGGAGGGGCTGGTCTCATCCCTTGGGGAACATCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592876.1
CDS-3UTR CAA 90 bp GCTGTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTTCCCGCTCCTTTCATCTTCGTCCGAGTaGCTCTCCTCCTCGGCCGCT +
Preference number: 5 (lower is better)
Translates to: AVLAFPLFSLLLSAFPLLSSSSE*LSSSAA
Trigger: AGCGGCCGAGGAGGAGAGCAACTCGGACGAAGATGA...AAGGAGCGGGAACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR CAA 90 bp CTCTGCCGGCTGTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTTCCGTCGTGGCCTGTTTGTaGAGATCTGCCACCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LCRLYWRSHSSLSFSRRSVVACL*RSATCS
Trigger: GGAGCAGGTGGCAGATCTCAACAAACAGGCCACGAC...GGAACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGCCGGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR CAA 90 bp AGCGGGACTCTGAGCTGGACTCCGAGGGTGACCGCTTATAGGGGTCATAGGTGGGTCGTGGCCTGTTTGTaGAGATCTGCCACCTGCTCC +
Preference number: 5 (lower is better)
Translates to: SGTLSWTPRVTAYRGHRWVVACL*RSATCS
Trigger: GGAGCAGGTGGCAGATCTCAACAAACAGGCCACGAC...CCACCTATGACCCCTATAAGCGGTCACCCTCGGAGTCCAGCTCAGAGTCCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587112.1
CDS-3UTR CAA 90 bp GTCTTTCCGGAGCATCCTGACGAAGTCACCGTCGGCCATGCCATAAGTCGTGGCGCCTCTGCCTCCTCCTaGTCTTTCCGGAGCATCCTG +
Preference number: 5 (lower is better)
Translates to: VFPEHPDEVTVGHAISRGASASS*SFRSIL
Trigger: CAGGATGCTCCGGAAAGACAAGGAGGAGGCAGAGGC...GCCACGACTTATGGCATGGCCGACGGTGACTTCGTCAGGATGCTCCGGAAAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587112.1
ENST00000591410.5
CDS-3UTR CAA 90 bp CTCTGCCTCCTCCTTGTCTTTCCGGAGCATCCTGACGAAGTCACCGTCGGCCATGCCTCTGCCTCCTCCTaGTCTTTCCGGAGCATCCTG +
Preference number: 5 (lower is better)
Translates to: LCLLLVFPEHPDEVTVGHASASS*SFRSIL
Trigger: CAGGATGCTCCGGAAAGACAAGGAGGAGGCAGAGGC...ATGGCCGACGGTGACTTCGTCAGGATGCTCCGGAAAGACAAGGAGGAGGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587112.1
ENST00000591410.5
CDS-3UTR CAA 90 bp CCTAATGTCGGTAATGGGGGCTTCGGGATCGGGACCTTGAGCGCCTTCGAGAAGAGAGCCTTGGCATGCTaGATGGCCTCTGCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: PNVGNGGFGIGTLSAFEKRALAC*MASASS
Trigger: GGAGGAGGCAGAGGCCATCAAGCATGCCAAGGCTCT...CTTCTCGAAGGCGCTCAAGGTCCCGATCCCGAAGCCCCCATTACCGACATTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR CAA 90 bp CGGCTCTGCCGGCTGTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTTCCTCCTCAAGAGCCTaGGCATGCTTGATGGCCTCT +
Preference number: 5 (lower is better)
Translates to: RLCRLYWRSHSSLSFSRRSSSRA*ACLMAS
Trigger: AGAGGCCATCAAGCATGCCAAGGCTCTTGAGGAGGA...ACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGCCGGCAGAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR CAA 90 bp GACGAAGTCACCGTCGGCCATGCCATAAGTCGTGGCCTGTTTGTTGAGATCTGCCTGGGTGGGCTGATCTaGCGACCCCTCAGCCGCTTC +
Preference number: 5 (lower is better)
Translates to: DEVTVGHAISRGLFVEICLGGLI*RPLSRF
Trigger: GAAGCGGCTGAGGGGTCGCAAGATCAGCCCACCCAG...GCAGATCTCAACAAACAGGCCACGACTTATGGCATGGCCGACGGTGACTTCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587112.1
CDS-3UTR CAA 90 bp GCGGATCTTGCGGGCCATGGCTCGAAGCTCGTCTTCCCGCTCCTGCCGCTCATGTCAGCTTGGGTGACTTaGGCAGCTCCTGTCTCTTTA +
Preference number: 5 (lower is better)
Translates to: ADLAGHGSKLVFPLLPLMSAWVT*AAPVSL
Trigger: TAAAGAGACAGGAGCTGCCAAAGTCACCCAAGCTGA...CATGAGCGGCAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS TCA 90 bp CCCATCATTTCCTGCCGCACTGGGGCACCTGCACACAGTGAGTGTTaGAATGGTCTCCGTCACAGTGGCCAGGCTTGGCAACCCAATGGC +
Preference number: 5 (lower is better)
Translates to: PIISCRTGAPAHSEC*NGLRHSGQAWQPNG
Trigger: GCCATTGGGTTGCCAAGCCTGGCCACTGTGACGGAGACCATTTCAACACTCACTGTGTGCAGGTGCCCCAGTGCGGCAGGAAATGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592876.1
CDS GCA 90 bp CATCTGGCCGGGAACACTGGACACACTGAACTCAGGGAGGGCAGGTaGTTCCAACACCCTACTCCGAGGAAGACAGTAAACCAAGGGGGC +
Preference number: 5 (lower is better)
Translates to: HLAGNTGHTELREGR*FQHPTPRKTVNQGG
Trigger: GCCCCCTTGGTTTACTGTCTTCCTCGGAGTAGGGTGTTGGAAGCACCTGCCCTCCCTGAGTTCAGTGTGTCCAGTGTTCCCGGCCAGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588070.1
ENST00000592876.1
CDS-3UTR CAA 90 bp AATGTCGGTAATGGGGGCTTCGGGATCGGGACCTTGAGCGCCTTCGAGAAGAGCGAATCCAGGTGCACCTaGCAAGCTCGGCCATGTACC +
Preference number: 5 (lower is better)
Translates to: NVGNGGFGIGTLSAFEKSESRCT*QARPCT
Trigger: GGTACATGGCCGAGCTTGCAAGGTGCACCTGGATTC...GCTCTTCTCGAAGGCGCTCAAGGTCCCGATCCCGAAGCCCCCATTACCGACATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR CAA 90 bp GTCACCGTCGGCCATGCCATAAGTCGTGGCCTGTTTGTTGAGATCTGCCACCTGTCATCTTCGTCCGAGTaGCTCTCCTCCTCGGCCGCT +
Preference number: 5 (lower is better)
Translates to: VTVGHAISRGLFVEICHLSSSSE*LSSSAA
Trigger: AGCGGCCGAGGAGGAGAGCAACTCGGACGAAGATGA...CAGGTGGCAGATCTCAACAAACAGGCCACGACTTATGGCATGGCCGACGGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587112.1
ENST00000591410.5
CDS-3UTR CAA 90 bp CTGCTCCTGGTTCAATTCATCCACGTCCACCTCCACGTCGATGTCGGGGATGACTCATCTTCGTCCGAGTaGCTCTCCTCCTCGGCCGCT +
Preference number: 5 (lower is better)
Translates to: LLLVQFIHVHLHVDVGDDSSSSE*LSSSAA
Trigger: AGCGGCCGAGGAGGAGAGCAACTCGGACGAAGATGA...GTCATCCCCGACATCGACGTGGAGGTGGACGTGGATGAATTGAACCAGGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591410.5
CDS-3UTR CAA 90 bp CTGCTCCTGGTTCAATTCATCCACGTCCACCTCCACGTCGATGTCGGGGATGACAGAGCCTTGGCATGCTaGATGGCCTCTGCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LLLVQFIHVHLHVDVGDDRALAC*MASASS
Trigger: GGAGGAGGCAGAGGCCATCAAGCATGCCAAGGCTCT...GTCATCCCCGACATCGACGTGGAGGTGGACGTGGATGAATTGAACCAGGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591410.5
CDS-3UTR CAA 90 bp CTTCATGCGGATCTTGCGGGCCATGGCTCGAAGCTCGTCTTCCCGCTCCTGCCGCTGGATCATCTTTTCTaGTGCCGCCTTCTTATCCGC +
Preference number: 5 (lower is better)
Translates to: LHADLAGHGSKLVFPLLPLDHLF*CRLLIR
Trigger: GCGGATAAGAAGGCGGCACAAGAAAAGATGATCCAG...CGGCAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGCATGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS GCA 90 bp AATACTCCCGTCTCCGCTCCGCCCTCTTCTTGTAGTCGACCATCATaGCTCGAAGCTTCCGCTCATGCTTCCGAGCCTCGTGCCACATTG +
Preference number: 5 (lower is better)
Translates to: NTPVSAPPSSCSRPS*LEASAHASEPRATL
Trigger: CAATGTGGCACGAGGCTCGGAAGCATGAGCGGAAGCTTCGAGGCATGATGGTCGACTACAAGAAGAGGGCGGAGCGGAGACGGGAGTATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000221455.8
ENST00000391952.7
ENST00000391953.8
ENST00000544944.6
ENST00000588247.5
ENST00000588936.5
ENST00000591410.5
ENST00000592056.5
CDS GCA 90 bp CCTCCTCCTCTGGCTTTTCTGCCGCCTTCTCTACCTCGGCCACCGTaGTGTCCTCGTAGGTATAACCGATGGAAGCCTTCTTCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: PPPLAFLPPSLPRPP*CPRRYNRWKPSSLP
Trigger: TGGCAGAGAAGAAGGCTTCCATCGGTTATACCTACGAGGACAGCACGGTGGCCGAGGTAGAGAAGGCGGCAGAAAAGCCAGAGGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000221455.8
ENST00000391952.7
ENST00000391953.8
ENST00000544944.6
ENST00000587112.1
ENST00000588016.1
ENST00000591410.5
CDS CCA 90 bp GTGTTGAAATGGTCTCCGTCACAGTGGCCAGGCTTGGCAACCCAATaGCTACGTCTACTGGGTGCCTCCTCCGTGCCTGGCCTTGATCTT +
Preference number: 5 (lower is better)
Translates to: VLKWSPSQWPGLATQ*LRLLGASSVPGLDL
Trigger: AAGATCAAGGCCAGGCACGGAGGAGGCACCCAGTAGACGTAGCCATTGGGTTGCCAAGCCTGGCCACTGTGACGGAGACCATTTCAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592876.1
CDS-3UTR CAA 90 bp GTCACCGTCGGCCATGCCATAAGTCGTGGCCTGTTTGTTGAGATCTGCCACCTGGAATCCAGGTGCACCTaGCAAGCTCGGCCATGTACC +
Preference number: 5 (lower is better)
Translates to: VTVGHAISRGLFVEICHLESRCT*QARPCT
Trigger: GGTACATGGCCGAGCTTGCAAGGTGCACCTGGATTC...CAGGTGGCAGATCTCAACAAACAGGCCACGACTTATGGCATGGCCGACGGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587112.1
CDS-3UTR CAA 90 bp CTCTGCCTCCTCCTTGTCTTTCCGGAGCATCCTGACGAAGTCACCGTCGGCCATTCCTCCTCAAGAGCCTaGGCATGCTTGATGGCCTCT +
Preference number: 5 (lower is better)
Translates to: LCLLLVFPEHPDEVTVGHSSSRA*ACLMAS
Trigger: AGAGGCCATCAAGCATGCCAAGGCTCTTGAGGAGGA...ATGGCCGACGGTGACTTCGTCAGGATGCTCCGGAAAGACAAGGAGGAGGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587112.1
CDS-3UTR CAA 90 bp GCTGTACTGGCGTTCCCACTCTTCTCTCTCCTTCTCTCGGCGTTCCCGCTCCTTAATCGGTCAATCATGTaGTTGGTGTCCCCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: AVLAFPLFSLLLSAFPLLNRSIM*LVSPCQ
Trigger: CTGGCAGGGGGACACCAACAACATGATTGACCGATT...AAGGAGCGGGAACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS-3UTR CAA 90 bp CATCCTGACGAAGTCACCGTCGGCCATGCCATAAGTCGTGGCCTGTTTGTTGAGGTCGTGGCCTGTTTGTaGAGATCTGCCACCTGCTCC +
Preference number: 5 (lower is better)
Translates to: HPDEVTVGHAISRGLFVEVVACL*RSATCS
Trigger: GGAGCAGGTGGCAGATCTCAACAAACAGGCCACGAC...CTCAACAAACAGGCCACGACTTATGGCATGGCCGACGGTGACTTCGTCAGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587112.1
ENST00000591410.5
CDS TCA 90 bp TTAAGGGAACAGTGCAGTTGTATGAAGGTGGAGGTCGAGGACAGGTaGAGGGCGTGGCGGAAGATGAAGATGCTAGAGGGAGTGGGAACA +
Preference number: 5 (lower is better)
Translates to: LREQCSCMKVEVEDR*RAWRKMKMLEGVGT
Trigger: TGTTCCCACTCCCTCTAGCATCTTCATCTTCCGCCACGCCCTTCACCTGTCCTCGACCTCCACCTTCATACAACTGCACTGTTCCCTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544944.6
CDS TCA 90 bp TCTAGAAGCTTGGGCATTCTGAAAAACCCTCAGGTGATTCTGAGGTaGGCATCACTGGGAAAGGGGTGTCCTAGATTCCACGCGCGGCTG +
Preference number: 5 (lower is better)
Translates to: SRSLGILKNPQVILR*ASLGKGCPRFHARL
Trigger: CAGCCGCGCGTGGAATCTAGGACACCCCTTTCCCAGTGATGCTCACCTCAGAATCACCTGAGGGTTTTTCAGAATGCCCAAGCTTCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588936.5
CDS TCA 90 bp TCTAGAAGCTTGGGCATTCTGAAAAACCCTCAGGTGATTCTGAGGTaGGCATCACTGGGAAAGGGGTGTCCTAGATTCCACGCGCTGGAG +
Preference number: 5 (lower is better)
Translates to: SRSLGILKNPQVILR*ASLGKGCPRFHALE
Trigger: CTCCAGCGCGTGGAATCTAGGACACCCCTTTCCCAGTGATGCTCACCTCAGAATCACCTGAGGGTTTTTCAGAATGCCCAAGCTTCTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544944.6
CDS TCA 90 bp GAAACAGACATTCTGGAGGTGGCCAGTCTAACGTCAGGACTGCTCTaGGGGTTACAGAGACTTCCCTTTTTCTTGCTAACACCGGATCGG +
Preference number: 5 (lower is better)
Translates to: ETDILEVASLTSGLL*GLQRLPFFLLTPDR
Trigger: CCGATCCGGTGTTAGCAAGAAAAAGGGAAGTCTCTGTAACCCTCAGAGCAGTCCTGACGTTAGACTGGCCACCTCCAGAATGTCTGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588247.5
CDS TCA 90 bp AGGGGAAAAGATCATAGAAATAGCACCCTAGAAATGAGAGATGAGTaGGGCAGAGGAAGGCCGGAACGGAGGAGGACAGGAGTGAGACAG +
Preference number: 5 (lower is better)
Translates to: RGKDHRNSTLEMRDE*GRGRPERRRTGVRQ
Trigger: CTGTCTCACTCCTGTCCTCCTCCGTTCCGGCCTTCCTCTGCCTCACTCATCTCTCATTTCTAGGGTGCTATTTCTATGATCTTTTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588016.1
CDS CCA 90 bp GGGTTACAGAGACTTCCCTTTTTCTTGCTAACACCGGATCGGCACTaGGAGGCCACACCAAACGACACAGTATGCTACAACAAACAGAAG +
Preference number: 5 (lower is better)
Translates to: GLQRLPFFLLTPDRH*EATPNDTVCYNKQK
Trigger: CTTCTGTTTGTTGTAGCATACTGTGTCGTTTGGTGTGGCCTCCCAGTGCCGATCCGGTGTTAGCAAGAAAAAGGGAAGTCTCTGTAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588247.5
CDS CCA 90 bp CAGCCAGGACCTCCCATCAAAGGACAAGTGTTACTTCCAAGAAAGTaGAGGGTCATGGGCTTCCTTACCTTCGAGAAGAGCTGTATTCTC +
Preference number: 5 (lower is better)
Translates to: QPGPPIKGQVLLPRK*RVMGFLTFEKSCIL
Trigger: GAGAATACAGCTCTTCTCGAAGGTAAGGAAGCCCATGACCCTCCACTTTCTTGGAAGTAACACTTGTCCTTTGATGGGAGGTCCTGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592876.1
CDS CCA 90 bp AGGGATGAAGGGACCAGGAAAGTCAGATGGTCTGTGAAACCCGTATaGGCAGAATCAAAGTCATCTAACAAGTTGGTGGCAGAGTCGATC +
Preference number: 5 (lower is better)
Translates to: RDEGTRKVRWSVKPV*AESKSSNKLVAESI
Trigger: GATCGACTCTGCCACCAACTTGTTAGATGACTTTGATTCTGCCCATACGGGTTTCACAGACCATCTGACTTTCCTGGTCCCTTCATCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544944.6
ENST00000588936.5
CDS CCA 90 bp CTCCCATCAAAGGACAAGTGTTACTTCCAAGAAAGTGGAGGGTCATaGGCTTCCTTACCTTCGAGAAGAGCTGTATTCTCGACTGTATCG +
Preference number: 5 (lower is better)
Translates to: LPSKDKCYFQESGGS*ASLPSRRAVFSTVS
Trigger: CGATACAGTCGAGAATACAGCTCTTCTCGAAGGTAAGGAAGCCCATGACCCTCCACTTTCTTGGAAGTAACACTTGTCCTTTGATGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592876.1
CDS CCA 90 bp AGGCCACACCAAACGACACAGTATGCTACAACAAACAGAAGCCCTTaGGATCCCACCAATGATTATCCTCAAGAAAAGATTAATGAATAT +
Preference number: 5 (lower is better)
Translates to: RPHQTTQYATTNRSP*DPTNDYPQEKINEY
Trigger: ATATTCATTAATCTTTTCTTGAGGATAATCATTGGTGGGATCCCAAGGGCTTCTGTTTGTTGTAGCATACTGTGTCGTTTGGTGTGGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588247.5
CDS TCA 90 bp ATGATTATCCTCAAGAAAAGATTAATGAATATACTCCTGAGGAAATaGGCCTCTTGTCTTGACATACTTCCAAGCCCAGATTTTACCAGG +
Preference number: 5 (lower is better)
Translates to: MIILKKRLMNILLRK*ASCLDILPSPDFTR
Trigger: CCTGGTAAAATCTGGGCTTGGAAGTATGTCAAGACAAGAGGCTCATTTCCTCAGGAGTATATTCATTAATCTTTTCTTGAGGATAATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588247.5
CDS GCA 72 bp GCTTCTCTCTTGCGGGTGATGGCGAGGGGCTCTGGCTaGGGCTGCGGCTGCGGCTGCGGCTCTGGCTGGGGC +
Preference number: 6 (lower is better)
Translates to: ASLLRVMARGSG*GCGCGCGSGWG
Trigger: GCCCCAGCCAGAGCCGCAGCCGCAGCCGCAGCCGCAGCCAGAGCCCCTCGCCATCACCCGCAAGAGAGAAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221455.8
ENST00000391952.7
ENST00000391953.8
ENST00000544944.6
ENST00000585432.1
CDS TCA 72 bp GCGGGAGTACCGGTGTCCGTCTCGGGAGCCCCCACCTaGGTGCCGCCGGCCACGGCTACGGGACCGGGAATA +
Preference number: 6 (lower is better)
Translates to: AGVPVSVSGAPT*VPPATATGPGI
Trigger: TATTCCCGGTCCCGTAGCCGTGGCCGGCGGCACTCAGGTGGGGGCTCCCGAGACGGACACCGGTACTCCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221455.8
ENST00000391952.7
ENST00000391953.8
ENST00000544944.6
CDS CAA 72 bp CAGCAGGGGACGCGGCCGGCCTGGTCAGCTTCTCTCTaGCGGGTGATGGCGAGGGGCTCTGGCTGCGGCTGC +
Preference number: 6 (lower is better)
Translates to: QQGTRPAWSASL*RVMARGSGCGC
Trigger: GCAGCCGCAGCCAGAGCCCCTCGCCATCACCCGCAAGAGAGAAGCTGACCAGGCCGGCCGCGTCCCCTGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221455.8
ENST00000391952.7
ENST00000391953.8
ENST00000544944.6
ENST00000585432.1
CDS CCA 72 bp TCAGCTTCTCGCCCACAGCAGGGGACGCGGCCGGCCTaGTCAGCTTCTCTCTTGCGGGTGATGGCGAGGGGC +
Preference number: 6 (lower is better)
Translates to: SASRPQQGTRPA*SASLLRVMARG
Trigger: GCCCCTCGCCATCACCCGCAAGAGAGAAGCTGACCAGGCCGGCCGCGTCCCCTGCTGTGGGCGAGAAGCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221455.8
ENST00000391952.7
ENST00000391953.8
ENST00000544944.6
ENST00000585432.1
CDS TCA 72 bp GAGGCAGAGGAAGGCCGGAACGGAGGAGGACAGGAGTaGGACAGGGGCAGCAGGAGGCTGGTGTGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: EAEEGRNGGGQE*DRGSRRLVCPG
Trigger: CCCAGGGCACACCAGCCTCCTGCTGCCCCTGTCTCACTCCTGTCCTCCTCCGTTCCGGCCTTCCTCTGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588016.1
CDS GCA 72 bp CAGCGGCCAGGGCGACTGCAGAATCCAGGTGCACCTTaGAAGCTCGGCCATGTACCTGCAGGAACTGGGCTG +
Preference number: 6 (lower is better)
Translates to: QRPGRLQNPGAP*KLGHVPAGTGL
Trigger: CAGCCCAGTTCCTGCAGGTACATGGCCGAGCTTGCAAGGTGCACCTGGATTCTGCAGTCGCCCTGGCCGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221455.8
ENST00000391952.7
ENST00000544944.6
ENST00000587112.1
ENST00000588936.5
ENST00000592056.5
CDS GCA 72 bp GGGCTCTCAGCGGCCAGGGCGACTGCAGAATCCAGGTaGACCTTGCAAGCTCGGCCATGTACCTGCAGGAAC +
Preference number: 6 (lower is better)
Translates to: GLSAARATAESR*TLQARPCTCRN
Trigger: GTTCCTGCAGGTACATGGCCGAGCTTGCAAGGTGCACCTGGATTCTGCAGTCGCCCTGGCCGCTGAGAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221455.8
ENST00000391952.7
ENST00000544944.6
ENST00000587112.1
ENST00000588936.5
ENST00000592056.5
CDS CCA 72 bp TGGTCTCCGTCACAGTGGCCAGGCTTGGCAACCCAATaGCTACGTCTACTGGGTGCCTCCTCCGTGCCTGGC +
Preference number: 6 (lower is better)
Translates to: WSPSQWPGLATQ*LRLLGASSVPG
Trigger: GCCAGGCACGGAGGAGGCACCCAGTAGACGTAGCCATTGGGTTGCCAAGCCTGGCCACTGTGACGGAGACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592876.1
CDS CAA 90 bp ACAGGGCTCTCAGCGGCCAGGGCGACTGCAGAATCCAGGTGCACCTaGCAAGCTCGGCCATGTACCTGCAGGAACTGGGCTGGGTCCTTC +
Preference number: 6 (lower is better)
Translates to: TGLSAARATAESRCT*QARPCTCRNWAGSF
Trigger: GAAGGACCCAGCCCAGTTCCTGCAGGTACATGGCCGAGCTTGCAAGGTGCACCTGGATTCTGCAGTCGCCCTGGCCGCTGAGAGCCCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221455.8
ENST00000391952.7
ENST00000544944.6
ENST00000587112.1
ENST00000588936.5
ENST00000592056.5
CDS GCA 72 bp GGAGGGCAGGTGCTTCCAACACCTTCATGCGGATCTTaGGGGCCATGGCTCGAAGCTCGTCTTCCCGCTCCT +
Preference number: 6 (lower is better)
Translates to: GGQVLPTPSCGS*GPWLEARLPAP
Trigger: AGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATCCGCATGAAGGTGTTGGAAGCACCTGCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591904.1
CDS GCA 72 bp GGGGTAGGGAGAGAGACACGGTTCGTAAGCACGGGGTaGCCCACAGAGGGTGAGGGACGAGACACAGAAACG +
Preference number: 6 (lower is better)
Translates to: GVGRETRFVSTG*PTEGEGRDTET
Trigger: CGTTTCTGTGTCTCGTCCCTCACCCTCTGTGGGGCACCCCGTGCTTACGAACCGTGTCTCTCTCCCTACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588016.1
CDS CCA 72 bp CGTTCCCGCTCCCTGCGAAGGCATGGCATGAGCATCTaGCCGGGAACACTGGACACACTGAACTCAGGGAGG +
Preference number: 6 (lower is better)
Translates to: RSRSLRRHGMSI*PGTLDTLNSGR
Trigger: CCTCCCTGAGTTCAGTGTGTCCAGTGTTCCCGGCCAGATGCTCATGCCATGCCTTCGCAGGGAGCGGGAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588070.1
ENST00000591904.1
ENST00000592876.1
CDS CCA 72 bp CTCCTTCTCTCGGCGTTCCCGCTCCCTGCGAAGGCATaGCATGAGCATCTGGCCGGGAACACTGGACACACT +
Preference number: 6 (lower is better)
Translates to: LLLSAFPLPAKA*HEHLAGNTGHT
Trigger: AGTGTGTCCAGTGTTCCCGGCCAGATGCTCATGCCATGCCTTCGCAGGGAGCGGGAACGCCGAGAGAAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588070.1
ENST00000591904.1
ENST00000592876.1
CDS CAA 72 bp TCAGCGGCCAGGGCGACTGCAGAATCCAGGTGCACCTaGCAAGCTCGGCCATGTACCTGCAGGAACTGGGCT +
Preference number: 6 (lower is better)
Translates to: SAARATAESRCT*QARPCTCRNWA
Trigger: AGCCCAGTTCCTGCAGGTACATGGCCGAGCTTGCAAGGTGCACCTGGATTCTGCAGTCGCCCTGGCCGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221455.8
ENST00000391952.7
ENST00000544944.6
ENST00000587112.1
ENST00000588936.5
ENST00000592056.5
CDS TCA 72 bp GCAGGCCCACCGGGCCCAGCTCTTGGGCACTGCTGCTaGCGGGAATTAGACGGGCGAGTTCCAAATTCTTAC +
Preference number: 6 (lower is better)
Translates to: AGPPGPALGHCC*RELDGRVPNSY
Trigger: GTAAGAATTTGGAACTCGCCCGTCTAATTCCCGTCAGCAGCAGTGCCCAAGAGCTGGGCCCGGTGGGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585432.1
CDS GCA 72 bp ATGCCTCGAAGCTTCCGCTCATGCTTCCGAGCCTCGTaGCACATTGTGGTGAGGCCAAGCCTGGGGCCTCAA +
Preference number: 6 (lower is better)
Translates to: MPRSFRSCFRAS*HIVVRPSLGPQ
Trigger: TTGAGGCCCCAGGCTTGGCCTCACCACAATGTGGCACGAGGCTCGGAAGCATGAGCGGAAGCTTCGAGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000221455.8
ENST00000391952.7
ENST00000391953.8
ENST00000544944.6
ENST00000588247.5
ENST00000588936.5
ENST00000591410.5
ENST00000592056.5
CDS TCA 72 bp TCCTGCCGCACTGGGGCACCTGCACACAGTGAGTGTTaGAATGGTCTCCGTCACAGTGGCCAGGCTTGGCAA +
Preference number: 6 (lower is better)
Translates to: SCRTGAPAHSEC*NGLRHSGQAWQ
Trigger: TTGCCAAGCCTGGCCACTGTGACGGAGACCATTTCAACACTCACTGTGTGCAGGTGCCCCAGTGCGGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592876.1
CDS TCA 72 bp GACCTTGAGCGCCTGGAAAGAGAAAGGGAGGGGCCGTaGGGATGGGGCATACACACATCAACACACCTGGGG +
Preference number: 6 (lower is better)
Translates to: DLERLEREREGP*GWGIHTSTHLG
Trigger: CCCCAGGTGTGTTGATGTGTGTATGCCCCATCCTCACGGCCCCTCCCTTTCTCTTTCCAGGCGCTCAAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592876.1
CDS GCA 72 bp GTCTCCGCTCCGCCCTCTTCTTGTAGTCGACCATCATaGCTCGAAGCTTCCGCTCATGCTTCCGAGCCTCGT +
Preference number: 6 (lower is better)
Translates to: VSAPPSSCSRPS*LEASAHASEPR
Trigger: ACGAGGCTCGGAAGCATGAGCGGAAGCTTCGAGGCATGATGGTCGACTACAAGAAGAGGGCGGAGCGGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000221455.8
ENST00000391952.7
ENST00000391953.8
ENST00000544944.6
ENST00000588247.5
ENST00000588936.5
ENST00000591410.5
ENST00000592056.5
CDS CCA 72 bp AGTGGCCAGGCTTGGCAACCCAATGGCTACGTCTACTaGGTGCCTCCTCCGTGCCTGGCCTTGATCTTGTCA +
Preference number: 6 (lower is better)
Translates to: SGQAWQPNGYVY*VPPPCLALILS
Trigger: TGACAAGATCAAGGCCAGGCACGGAGGAGGCACCCAGTAGACGTAGCCATTGGGTTGCCAAGCCTGGCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592876.1
CDS CCA 72 bp GGCCGTGAGGATGGGGCATACACACATCAACACACCTaGGGCCGTGGATGCTTCAGTGATCGGGGCACTTGT +
Preference number: 6 (lower is better)
Translates to: GREDGAYTHQHT*GRGCFSDRGTC
Trigger: ACAAGTGCCCCGATCACTGAAGCATCCACGGCCCCAGGTGTGTTGATGTGTGTATGCCCCATCCTCACGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592876.1
CDS TCA 72 bp CATCATTTCCTGCCGCACTGGGGCACCTGCACACAGTaGGTGTTGAAATGGTCTCCGTCACAGTGGCCAGGC +
Preference number: 6 (lower is better)
Translates to: HHFLPHWGTCTQ*VLKWSPSQWPG
Trigger: GCCTGGCCACTGTGACGGAGACCATTTCAACACTCACTGTGTGCAGGTGCCCCAGTGCGGCAGGAAATGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592876.1
CDS GCA 72 bp CATCATATTAACAGGGCTCTCAGCGGCCAGGGCGACTaGAGAATCCAGGTGCACCTTGCAAGCTCGGCCATG +
Preference number: 6 (lower is better)
Translates to: HHINRALSGQGD*RIQVHLASSAM
Trigger: CATGGCCGAGCTTGCAAGGTGCACCTGGATTCTGCAGTCGCCCTGGCCGCTGAGAGCCCTGTTAATATGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221455.8
ENST00000391952.7
ENST00000544944.6
ENST00000587112.1
ENST00000588936.5
ENST00000592056.5
CDS TCA 72 bp CACACATCAACACACCTGGGGCCGTGGATGCTTCAGTaGTCGGGGCACTTGTCTGTGGAGGGAAGGATGTTC +
Preference number: 6 (lower is better)
Translates to: HTSTHLGPWMLQ*SGHLSVEGRMF
Trigger: GAACATCCTTCCCTCCACAGACAAGTGCCCCGATCACTGAAGCATCCACGGCCCCAGGTGTGTTGATGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592876.1
CDS GCA 72 bp CTGGCTTTTCTGCCGCCTTCTCTACCTCGGCCACCGTaGTGTCCTCGTAGGTATAACCGATGGAAGCCTTCT +
Preference number: 6 (lower is better)
Translates to: LAFLPPSLPRPP*CPRRYNRWKPS
Trigger: AGAAGGCTTCCATCGGTTATACCTACGAGGACAGCACGGTGGCCGAGGTAGAGAAGGCGGCAGAAAAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000221455.8
ENST00000391952.7
ENST00000391953.8
ENST00000544944.6
ENST00000587112.1
ENST00000588016.1
ENST00000591410.5
CDS CAA 90 bp ATGTGGTCCAGGTGGGCACGGACATCGAATCGGTCAATCATGTTGTaGGTGTCCCCCTGCCAGGGCATCATATTAACAGGGCTCTCAGCG +
Preference number: 6 (lower is better)
Translates to: MWSRWARTSNRSIML*VSPCQGIILTGLSA
Trigger: CGCTGAGAGCCCTGTTAATATGATGCCCTGGCAGGGGGACACCAACAACATGATTGACCGATTCGATGTCCGTGCCCACCTGGACCACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221455.8
ENST00000391952.7
ENST00000544944.6
ENST00000587112.1
ENST00000592056.5
CDS CAA 90 bp GGGATGTGGTCCAGGTGGGCACGGACATCGAATCGGTCAATCATGTaGTTGGTGTCCCCCTGCCAGGGCATCATATTAACAGGGCTCTCA +
Preference number: 6 (lower is better)
Translates to: GMWSRWARTSNRSIM*LVSPCQGIILTGLS
Trigger: TGAGAGCCCTGTTAATATGATGCCCTGGCAGGGGGACACCAACAACATGATTGACCGATTCGATGTCCGTGCCCACCTGGACCACATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221455.8
ENST00000391952.7
ENST00000544944.6
ENST00000587112.1
ENST00000592056.5
CDS TCA 72 bp TTCAGCGCCTTCTGCATCCTCAGTTTCAGCTTCTCCTaGGGCGTCAGCTTGGGTTTGGCAGCTCCTGTCTCT +
Preference number: 6 (lower is better)
Translates to: FSAFCILSFSFS*GVSLGLAAPVS
Trigger: AGAGACAGGAGCTGCCAAACCCAAGCTGACGCCTCAGGAGAAGCTGAAACTGAGGATGCAGAAGGCGCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221455.8
ENST00000391953.8
CDS TCA 72 bp TTCAGCGCCTTCTGCATCCTCAGTTTCAGCTTCTCCTaGGGCGTCAGCTTGGGTGACTTTGGCAGCTCCTGT +
Preference number: 6 (lower is better)
Translates to: FSAFCILSFSFS*GVSLGDFGSSC
Trigger: ACAGGAGCTGCCAAAGTCACCCAAGCTGACGCCTCAGGAGAAGCTGAAACTGAGGATGCAGAAGGCGCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391952.7
CDS TCA 72 bp CAGTGCAGTTGTATGAAGGTGGAGGTCGAGGACAGGTaGAGGGCGTGGCGGAAGATGAAGATGCTAGAGGGA +
Preference number: 6 (lower is better)
Translates to: QCSCMKVEVEDR*RAWRKMKMLEG
Trigger: TCCCTCTAGCATCTTCATCTTCCGCCACGCCCTTCACCTGTCCTCGACCTCCACCTTCATACAACTGCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544944.6
CDS GCA 72 bp GGGAACACTGGACACACTGAACTCAGGGAGGGCAGGTaGTTCCAACACCCTACTCCGAGGAAGACAGTAAAC +
Preference number: 6 (lower is better)
Translates to: GNTGHTELREGR*FQHPTPRKTVN
Trigger: GTTTACTGTCTTCCTCGGAGTAGGGTGTTGGAAGCACCTGCCCTCCCTGAGTTCAGTGTGTCCAGTGTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588070.1
ENST00000592876.1
CDS CAA 90 bp GGCAGGTGGAGGAAATCGGAGAAAGCTTTTAAGGGAACAGTGCAGTaGTATGAAGGTGGAGGTCGAGGACAGGTGAAGGGCGTGGCGGAA +
Preference number: 6 (lower is better)
Translates to: GRWRKSEKAFKGTVQ*YEGGGRGQVKGVAE
Trigger: TTCCGCCACGCCCTTCACCTGTCCTCGACCTCCACCTTCATACAACTGCACTGTTCCCTTAAAAGCTTTCTCCGATTTCCTCCACCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544944.6
CDS GCA 72 bp GAATCCAGGTGCACCTTGCAAGCTCGGCCATGTACCTaGAGGAACTGGGCTGGGTCCTTCTTGATCTTTTCA +
Preference number: 6 (lower is better)
Translates to: ESRCTLQARPCT*RNWAGSFLIFS
Trigger: TGAAAAGATCAAGAAGGACCCAGCCCAGTTCCTGCAGGTACATGGCCGAGCTTGCAAGGTGCACCTGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221455.8
ENST00000391952.7
ENST00000544944.6
ENST00000587112.1
ENST00000588936.5
ENST00000592056.5
CDS CAA 72 bp AGGTGGGCACGGACATCGAATCGGTCAATCATGTTGTaGGTGTCCCCCTGCCAGGGCATCATATTAACAGGG +
Preference number: 6 (lower is better)
Translates to: RWARTSNRSIML*VSPCQGIILTG
Trigger: CCCTGTTAATATGATGCCCTGGCAGGGGGACACCAACAACATGATTGACCGATTCGATGTCCGTGCCCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221455.8
ENST00000391952.7
ENST00000544944.6
ENST00000587112.1
ENST00000588936.5
ENST00000592056.5
CDS CAA 72 bp CTCCTGCCGCTCATGCTCCTGCTGGATCATCTTTTCTaGTGCCGCCTTCTTATCCGCCTTGAACTGCCTGTT +
Preference number: 6 (lower is better)
Translates to: LLPLMLLLDHLF*CRLLIRLELPV
Trigger: AACAGGCAGTTCAAGGCGGATAAGAAGGCGGCACAAGAAAAGATGATCCAGCAGGAGCATGAGCGGCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221455.8
ENST00000391952.7
ENST00000391953.8
ENST00000585615.5
ENST00000591904.1
CDS CAA 72 bp CTCCTGCCGCTCATGCTCCTGCTGGATCATCTTTTCTaGTGCCGCCTTCTTATCCGCCTTGATGACTTTGGC +
Preference number: 6 (lower is better)
Translates to: LLPLMLLLDHLF*CRLLIRLDDFG
Trigger: GCCAAAGTCATCAAGGCGGATAAGAAGGCGGCACAAGAAAAGATGATCCAGCAGGAGCATGAGCGGCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544944.6
CDS CCA 72 bp CTCGTAGTTACACTTCCGTTCGTCCGACTCCTGTTCTaGGGAGCTTTAGGGAAGGGCGAGACCTTGAAATCA +
Preference number: 6 (lower is better)
Translates to: LVVTLPFVRLLF*GALGKGETLKS
Trigger: TGATTTCAAGGTCTCGCCCTTCCCTAAAGCTCCCCAGAACAGGAGTCGGACGAACGGAAGTGTAACTACGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588016.1
CDS CAA 72 bp TCCAGGTGGGCACGGACATCGAATCGGTCAATCATGTaGTTGGTGTCCCCCTGCCAGGGCATCATATTAACA +
Preference number: 6 (lower is better)
Translates to: SRWARTSNRSIM*LVSPCQGIILT
Trigger: TGTTAATATGATGCCCTGGCAGGGGGACACCAACAACATGATTGACCGATTCGATGTCCGTGCCCACCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221455.8
ENST00000391952.7
ENST00000544944.6
ENST00000587112.1
ENST00000588936.5
ENST00000592056.5
CDS CAA 90 bp CTGCTGACGGGAATTAGACGGGCGAGTTCCAAATTCTTACTGACTTaGGCAGCTCCTGTCTCTTTACCAGCGGCAGGTTCGGTCTTTTTC +
Preference number: 6 (lower is better)
Translates to: LLTGIRRASSKFLLT*AAPVSLPAAGSVFF
Trigger: GAAAAAGACCGAACCTGCCGCTGGTAAAGAGACAGGAGCTGCCAAAGTCAGTAAGAATTTGGAACTCGCCCGTCTAATTCCCGTCAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585432.1
CDS CCA 72 bp AGACTTCCCTTTTTCTTGCTAACACCGGATCGGCACTaGGAGGCCACACCAAACGACACAGTATGCTACAAC +
Preference number: 6 (lower is better)
Translates to: RLPFFLLTPDRH*EATPNDTVCYN
Trigger: GTTGTAGCATACTGTGTCGTTTGGTGTGGCCTCCCAGTGCCGATCCGGTGTTAGCAAGAAAAAGGGAAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588247.5
CDS CAA 72 bp GGAATTAGACGGGCGAGTTCCAAATTCTTACTGACTTaGGCAGCTCCTGTCTCTTTACCAGCGGCAGGTTCG +
Preference number: 6 (lower is better)
Translates to: GIRRASSKFLLT*AAPVSLPAAGS
Trigger: CGAACCTGCCGCTGGTAAAGAGACAGGAGCTGCCAAAGTCAGTAAGAATTTGGAACTCGCCCGTCTAATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585432.1
CDS TCA 72 bp TTGGGCATTCTGAAAAACCCTCAGGTGATTCTGAGGTaGGCATCACTGGGAAAGGGGTGTCCTAGATTCCAC +
Preference number: 6 (lower is better)
Translates to: LGILKNPQVILR*ASLGKGCPRFH
Trigger: GTGGAATCTAGGACACCCCTTTCCCAGTGATGCTCACCTCAGAATCACCTGAGGGTTTTTCAGAATGCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544944.6
ENST00000588936.5
CDS CAA 72 bp AGGAAATCGGAGAAAGCTTTTAAGGGAACAGTGCAGTaGTATGAAGGTGGAGGTCGAGGACAGGTGAAGGGC +
Preference number: 6 (lower is better)
Translates to: RKSEKAFKGTVQ*YEGGGRGQVKG
Trigger: GCCCTTCACCTGTCCTCGACCTCCACCTTCATACAACTGCACTGTTCCCTTAAAAGCTTTCTCCGATTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544944.6
CDS TCA 72 bp ATTCTGGAGGTGGCCAGTCTAACGTCAGGACTGCTCTaGGGGTTACAGAGACTTCCCTTTTTCTTGCTAACA +
Preference number: 6 (lower is better)
Translates to: ILEVASLTSGLL*GLQRLPFFLLT
Trigger: TGTTAGCAAGAAAAAGGGAAGTCTCTGTAACCCTCAGAGCAGTCCTGACGTTAGACTGGCCACCTCCAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588247.5
CDS GCA 72 bp CTGTGCCAGGCCAACTTAATACTCACTCCTATTGTGTaGCAAGCCAAATCTCAAGAGTGGCTGAGCTCTTCT +
Preference number: 6 (lower is better)
Translates to: LCQANLILTPIV*QAKSQEWLSSS
Trigger: AGAAGAGCTCAGCCACTCTTGAGATTTGGCTTGGCACACAATAGGAGTGAGTATTAAGTTGGCCTGGCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588247.5
CDS CCA 72 bp GGGACCAGGAAAGTCAGATGGTCTGTGAAACCCGTATaGGCAGAATCAAAGTCATCTAACAAGTTGGTGGCA +
Preference number: 6 (lower is better)
Translates to: GTRKVRWSVKPV*AESKSSNKLVA
Trigger: TGCCACCAACTTGTTAGATGACTTTGATTCTGCCCATACGGGTTTCACAGACCATCTGACTTTCCTGGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544944.6
ENST00000588936.5
CDS CAA 90 bp TGGTCTGTGAAACCCGTATGGGCAGAATCAAAGTCATCTAACAAGTaGGTGGCAGAGTCGATCCCAAACAACACATCTCTTAGCTTCAGG +
Preference number: 6 (lower is better)
Translates to: WSVKPVWAESKSSNK*VAESIPNNTSLSFR
Trigger: CCTGAAGCTAAGAGATGTGTTGTTTGGGATCGACTCTGCCACCAACTTGTTAGATGACTTTGATTCTGCCCATACGGGTTTCACAGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544944.6
ENST00000588936.5
CDS CCA 72 bp AACCCGTATGGGCAGAATCAAAGTCATCTAACAAGTTaGTGGCAGAGTCGATCCCAAACAACACATCTCTTA +
Preference number: 6 (lower is better)
Translates to: NPYGQNQSHLTS*WQSRSQTTHLL
Trigger: TAAGAGATGTGTTGTTTGGGATCGACTCTGCCACCAACTTGTTAGATGACTTTGATTCTGCCCATACGGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544944.6
ENST00000588936.5
CDS CAA 72 bp AAACCCGTATGGGCAGAATCAAAGTCATCTAACAAGTaGGTGGCAGAGTCGATCCCAAACAACACATCTCTT +
Preference number: 6 (lower is better)
Translates to: KPVWAESKSSNK*VAESIPNNTSL
Trigger: AAGAGATGTGTTGTTTGGGATCGACTCTGCCACCAACTTGTTAGATGACTTTGATTCTGCCCATACGGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544944.6
ENST00000588936.5
CDS CCA 72 bp CAAACGACACAGTATGCTACAACAAACAGAAGCCCTTaGGATCCCACCAATGATTATCCTCAAGAAAAGATT +
Preference number: 6 (lower is better)
Translates to: QTTQYATTNRSP*DPTNDYPQEKI
Trigger: AATCTTTTCTTGAGGATAATCATTGGTGGGATCCCAAGGGCTTCTGTTTGTTGTAGCATACTGTGTCGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588247.5
CDS TCA 72 bp CTCAAGAAAAGATTAATGAATATACTCCTGAGGAAATaGGCCTCTTGTCTTGACATACTTCCAAGCCCAGAT +
Preference number: 6 (lower is better)
Translates to: LKKRLMNILLRK*ASCLDILPSPD
Trigger: ATCTGGGCTTGGAAGTATGTCAAGACAAGAGGCTCATTTCCTCAGGAGTATATTCATTAATCTTTTCTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588247.5