RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLASP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000163539

Ensembl transcript IDs: ENST00000313350.10, ENST00000333778.10, ENST00000359576.9, ENST00000399362.8, ENST00000461133.8, ENST00000462878.1, ENST00000464961.1, ENST00000467956.1, ENST00000468888.6, ENST00000475576.1, ENST00000476251.1, ENST00000476433.5, ENST00000480013.6, ENST00000480385.1, ENST00000482896.5, ENST00000485378.6, ENST00000486796.1, ENST00000487200.5, ENST00000487553.5, ENST00000491045.1, ENST00000494261.1, ENST00000496954.2, ENST00000498331.1, ENST00000635664.1, ENST00000650653.1, ENST00000682230.1

Found 1190 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTTTTGGAATATATGTTTAGGGTTTGGTTAGACAGAGTAGAGCTTTaGAGTTCTCCCAGATCTCCAAAAGGCTTCACATTCTTGGTAAGA +
Preference number: 1 (lower is better)
Translates to: VLEYMFRVWLDRVEL*SSPRSPKGFTFLVR
Trigger: TCTTACCAAGAATGTGAAGCCTTTTGGAGATCTGGGAGAACTGCAAAGCTCTACTCTGTCTAACCAAACCCTAAACATATATTCCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
3UTR CCA 90 bp TCTCTCTATCACTTTTGTTTGCATTTTGATTGCAGCCAGATTAATTaGGTAGTCTGCAGTTTGAATGATAGGACAAAGCACTTTGATGCA +
Preference number: 1 (lower is better)
Translates to: SLYHFCLHFDCSQIN*VVCSLNDRTKHFDA
Trigger: TGCATCAAAGTGCTTTGTCCTATCATTCAAACTGCAGACTACCCAATTAATCTGGCTGCAATCAAAATGCAAACAAAAGTGATAGAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476251.1
3UTR-3UTR TCA 90 bp AACATCAGTAGTGGGATCAGCTCCTCCAGAACCTGTTTGTGCACGTTTGATGTAATCTGTCCTTTCTTTTaGGAGACCTGGTTCGCTGTG +
Preference number: 2 (lower is better)
Translates to: NISSGISSSRTCLCTFDVICPFF*ETWFAV
Trigger: CACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGAT...TACATCAAACGTGCACAAACAGGTTCTGGAGGAGCTGATCCCACTACTGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476251.1
3UTR-3UTR CCA 90 bp TTGGTTAGACAGAGTAGAGCTTTGCAGTTCTCCCAGATCTCCAAAAGGCTTCACCCCCTTAGAAACCAGTaGCTAGATGTGGTAGAAGTG +
Preference number: 2 (lower is better)
Translates to: LVRQSRALQFSQISKRLHPLRNQ*LDVVEV
Trigger: CACTTCTACCACATCTAGCCACTGGTTTCTAAGGGG...GTGAAGCCTTTTGGAGATCTGGGAGAACTGCAAAGCTCTACTCTGTCTAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
3UTR CAA 90 bp GGCAGCAGCTCAGTTAAAAGTATTAGCCCTGAAGAGGTAGAGAATTaGAGCCCATTATACAAAGACAGCCTTGGCACCATCTTCTCTCTC +
Preference number: 2 (lower is better)
Translates to: GSSSVKSISPEEVEN*SPLYKDSLGTIFSL
Trigger: GAGAGAGAAGATGGTGCCAAGGCTGTCTTTGTATAATGGGCTCAAATTCTCTACCTCTTCAGGGCTAATACTTTTAACTGAGCTGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
3UTR-3UTR TCA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCATCTGTCCTTTCTTTTaGGAGACCTGGTTCGCTGTG +
Preference number: 2 (lower is better)
Translates to: PKKLQLMTCITITQTESSICPFF*ETWFAV
Trigger: CACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGAT...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
3UTR-3UTR TCA 90 bp AGTGGGATCAGCTCCTCCAGAACCTGTTTGTGCACGTTTGATGTAAAGATTCAGTTACTGCCAGTAAGTTaGCTGAGATGTGGTTTTAGT +
Preference number: 2 (lower is better)
Translates to: SGISSSRTCLCTFDVKIQLLPVS*LRCGFS
Trigger: ACTAAAACCACATCTCAGTCAACTTACTGGCAGTAA...CTGAATCTTTACATCAAACGTGCACAAACAGGTTCTGGAGGAGCTGATCCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476251.1
3UTR-3UTR GCA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCATCATAAAAGTTACATaGAGACTGAGGATAGTCCTC +
Preference number: 2 (lower is better)
Translates to: PKKLQLMTCITITQTESSIIKVT*RLRIVL
Trigger: GAGGACTATCCTCAGTCTGCATGTAACTTTTATGAT...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
3UTR-3UTR TCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTATCTGTCCTTTCTTTTaGGAGACCTGGTTCGCTGTG +
Preference number: 2 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFICPFF*ETWFAV
Trigger: CACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGAT...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
3UTR-3UTR TCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATATCTGTCCTTTCTTTTaGGAGACCTGGTTCGCTGTG +
Preference number: 2 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHICPFF*ETWFAV
Trigger: CACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGAT...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
3UTR-3UTR GCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCATCATAAAAGTTACATaGAGACTGAGGATAGTCCTC +
Preference number: 2 (lower is better)
Translates to: SHKRSPAVVQISPALFHIIIKVT*RLRIVL
Trigger: GAGGACTATCCTCAGTCTGCATGTAACTTTTATGAT...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
3UTR-3UTR GCA 90 bp CATTTTGATTGCAGCCAGATTAATTGGGTAGTCTGCAGTTTGAATGATAGGACAAGCACTTTGATGCACTaGTCTGGACTAATTGAAGTG +
Preference number: 2 (lower is better)
Translates to: HFDCSQINWVVCSLNDRTSTLMH*SGLIEV
Trigger: CACTTCAATTAGTCCAGAGCAGTGCATCAAAGTGCT...TGTCCTATCATTCAAACTGCAGACTACCCAATTAATCTGGCTGCAATCAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476251.1
3UTR CAA 90 bp GTTATGAAAATTCTACAGGCAATCATGGATTCAAGAATTGTTTCTTaGATCAAGACGATGATGAGAACAAGGGAAAAGGAGAAACAAGGC +
Preference number: 2 (lower is better)
Translates to: VMKILQAIMDSRIVS*IKTMMRTREKEKQG
Trigger: GCCTTGTTTCTCCTTTTCCCTTGTTCTCATCATCGTCTTGATCAAAGAAACAATTCTTGAATCCATGATTGCCTGTAGAATTTTCATAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
3UTR-3UTR GCA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTATCATAAAAGTTACATaGAGACTGAGGATAGTCCTC +
Preference number: 2 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFIIKVT*RLRIVL
Trigger: GAGGACTATCCTCAGTCTGCATGTAACTTTTATGAT...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
3UTR-3UTR GCA 90 bp CATTTTGATTGCAGCCAGATTAATTGGGTAGTCTGCAGTTTGAATGATAGGACAATGCTATTGCTCAGTTaGTTTCTCTTAGAAATACAG +
Preference number: 2 (lower is better)
Translates to: HFDCSQINWVVCSLNDRTMLLLS*FLLEIQ
Trigger: CTGTATTTCTAAGAGAAAGCAACTGAGCAATAGCAT...TGTCCTATCATTCAAACTGCAGACTACCCAATTAATCTGGCTGCAATCAAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476251.1
3UTR-3UTR TCA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAATCCAAAGGATGTGTTTaGGAACTTCCTTTCATTGAT +
Preference number: 2 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKSKGCV*ELPFID
Trigger: ATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGA...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
3UTR-3UTR CAA 90 bp ACTTTGATGCACTGCTCTGGACTAATTGAAGTGGCCAACACTGATGCCGCTTCCCACCACCTAATGCTATaGCTCAGTTGCTTTCTCTTA +
Preference number: 3 (lower is better)
Translates to: TLMHCSGLIEVANTDAASHHLML*LSCFLL
Trigger: TAAGAGAAAGCAACTGAGCAATAGCATTAGGTGGTG...GGAAGCGGCATCAGTGTTGGCCACTTCAATTAGTCCAGAGCAGTGCATCAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476251.1
3UTR-3UTR CAA 90 bp TTACCGCATGAACAGCCACCAGGCAGAAGACACAAGCTTTCCGAACACTGCTCTCTCTATCACTTTTGTTaGCATTTTGATTGCAGCCAG +
Preference number: 3 (lower is better)
Translates to: LPHEQPPGRRHKLSEHCSLYHFC*HFDCSQ
Trigger: CTGGCTGCAATCAAAATGCAAACAAAAGTGATAGAG...AGAGCAGTGTTCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTGTTCATGCGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476251.1
3UTR TCA 72 bp CTGAGATGTGGTTTTAGTTCATCACCAATTACCGCATaGACAGCCACCAGGCAGAAGACACAAGCTTTCCGA +
Preference number: 3 (lower is better)
Translates to: LRCGFSSSPITA*TATRQKTQAFR
Trigger: TCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTGTTCATGCGGTAATTGGTGATGAACTAAAACCACATCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476251.1
3UTR GCA 72 bp CAGCCACCAGGCAGAAGACACAAGCTTTCCGAACACTaGTCTCTGAATTATCATAACCCTGTATTAGACCTG +
Preference number: 3 (lower is better)
Translates to: QPPGRRHKLSEH*SLNYHNPVLDL
Trigger: CAGGTCTAATACAGGGTTATGATAATTCAGAGAGCAGTGTTCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476251.1
3UTR TCA 72 bp TGGTCACTCCCATGTCTCGATAATTTGTTTATTACGTaGGAAACAGAAGACGGTCAAGGACACACACGCACT +
Preference number: 3 (lower is better)
Translates to: WSLPCLDNLFIT*ETEDGQGHTRT
Trigger: AGTGCGTGTGTGTCCTTGACCGTCTTCTGTTTCTCACGTAATAAACAAATTATCGAGACATGGGAGTGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
3UTR TCA 72 bp TGGGATCAGCTCCTCCAGAACCTGTTTGTGCACGTTTaGTGTAAAGATTCAGTAGCTTCATTTTACTGCCAG +
Preference number: 3 (lower is better)
Translates to: WDQLLQNLFVHV*CKDSVASFYCQ
Trigger: CTGGCAGTAAAATGAAGCTACTGAATCTTTACATCAAACGTGCACAAACAGGTTCTGGAGGAGCTGATCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476251.1
3UTR-3UTR CAA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTATCTGTCCTTTCTTTaGAGAGACCTGGTTCGCTGT +
Preference number: 3 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLYLSFL*RDLVRC
Trigger: ACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATA...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
3UTR-3UTR CAA 90 bp TGTTTGCATTTTGATTGCAGCCAGATTAATTGGGTAGTCTGCAGTTTGAATGATTATCTGTCCTTTCTTTaGAGAGACCTGGTTCGCTGT +
Preference number: 3 (lower is better)
Translates to: CLHFDCSQINWVVCSLNDYLSFL*RDLVRC
Trigger: ACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATA...ATCATTCAAACTGCAGACTACCCAATTAATCTGGCTGCAATCAAAATGCAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476251.1
3UTR-3UTR CAA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTGAGAACTTCCTTTCATaGATGAGGGTGGTCTATCTG +
Preference number: 3 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFENFLS*MRVVYL
Trigger: CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
3UTR CCA 72 bp AAGGAAACCAGGTTCCACCATTTAAAGAAAAGGTGCTaGTCACTCCCATGTCTCGATAATTTGTTTATTACG +
Preference number: 3 (lower is better)
Translates to: KETRFHHLKKRC*SLPCLDNLFIT
Trigger: CGTAATAAACAAATTATCGAGACATGGGAGTGACCAGCACCTTTTCTTTAAATGGTGGAACCTGGTTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
3UTR-3UTR CAA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTTATCTGTCCTTTCTTTaGAGAGACCTGGTTCGCTGT +
Preference number: 3 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFYLSFL*RDLVRC
Trigger: ACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATA...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
3UTR TCA 72 bp AACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTaGGAACTTCCTTTCATTGATGAGGGTGGTCTATCT +
Preference number: 3 (lower is better)
Translates to: NWETIVSSKGCV*ELPFIDEGGLS
Trigger: AGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
3UTR GCA 72 bp TTGCATTTTGATTGCAGCCAGATTAATTGGGTAGTCTaGAGTTTGAATGATAGGACAAAGCACTTTGATGCA +
Preference number: 3 (lower is better)
Translates to: LHFDCSQINWVV*SLNDRTKHFDA
Trigger: TGCATCAAAGTGCTTTGTCCTATCATTCAAACTGCAGACTACCCAATTAATCTGGCTGCAATCAAAATGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476251.1
3UTR CCA 72 bp CACTTTTGTTTGCATTTTGATTGCAGCCAGATTAATTaGGTAGTCTGCAGTTTGAATGATAGGACAAAGCAC +
Preference number: 3 (lower is better)
Translates to: HFCLHFDCSQIN*VVCSLNDRTKH
Trigger: GTGCTTTGTCCTATCATTCAAACTGCAGACTACCCAATTAATCTGGCTGCAATCAAAATGCAAACAAAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476251.1
3UTR CCA 72 bp TTTCAGTTAAACAAAGTACAGATAACTCTGCAACAATaGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTC +
Preference number: 3 (lower is better)
Translates to: FQLNKVQITLQQ*QTASLIAICLF
Trigger: GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTGTACTTTGTTTAACTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGGGCCGCCCGCCCGCCTaGCAGTCTGTGAGCGGCCAA +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDEGRPPA*QSVSGQ
Trigger: TTGGCCGCTCACAGACTGGCAGGCGGGCGGGCGGCC...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCGGCCGCCCGCCCGCCTaGCAGTCTGTGAGCGGCCAA +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRGRPPA*QSVSGQ
Trigger: TTGGCCGCTCACAGACTGGCAGGCGGGCGGGCGGCC...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR CCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCCTCCAGGTCCGAGATaGCGCCGGGGGCGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDEPPGPR*RRGRQG
Trigger: ACCTTGGCGCCCCCGGCGCCATCTCGGACCTGGAGG...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR TCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCACGTCAGCACGCGCGTaGCGTCAGCACGACGCCGGC +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRTSARA*RQHDAG
Trigger: GCCGGCGTCGTGCTGACGTCACGCGCGTGCTGACGT...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399362.8
CDS-3UTR TCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGAACCCACCCAGCCGGTaGGCGCGTCGACTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDENPPSR*ARRLSC
Trigger: GCAAGACAGTCGACGCGCTCACCGGCTGGGTGGGTT...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGGCCGCCCGCCCGCCTaGCAGTCTGTGAGCGGCCAA +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLGRPPA*QSVSGQ
Trigger: TTGGCCGCTCACAGACTGGCAGGCGGGCGGGCGGCC...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp AAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTAGTAGCTCCTGGCCGACCTaGAGCCGGCCGCCGACGTCC +
Preference number: 4 (lower is better)
Translates to: KLQLMTCITITQTESSCSSSWPT*SRPPTS
Trigger: GGACGTCGGCGGCCGGCTGCAGGTCGGCCAGGAGCT...ACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTAGCTCCTGGCCGACCTaGAGCCGGCCGCCGACGTCC +
Preference number: 4 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVSSWPT*SRPPTS
Trigger: GGACGTCGGCGGCCGGCTGCAGGTCGGCCAGGAGCT...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR TCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCAACCCACCCAGCCGGTaGGCGCGTCGACTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRNPPSR*ARRLSC
Trigger: GCAAGACAGTCGACGCGCTCACCGGCTGGGTGGGTT...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTAGCTCCTGGCCGACCTaGAGCCGGCCGCCGACGTCC +
Preference number: 4 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLSSWPT*SRPPTS
Trigger: GGACGTCGGCGGCCGGCTGCAGGTCGGCCAGGAGCT...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCGCGCGTCGACTGTCTTaGCTAGGCGGCCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRARRLS*LGGPGP
Trigger: AGGACCTGGGCCGCCTAGGCAAGACAGTCGACGCGC...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGCGCGTCGACTGTCTTaGCTAGGCGGCCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDARRLS*LGGPGP
Trigger: AGGACCTGGGCCGCCTAGGCAAGACAGTCGACGCGC...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR CCA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGCCTCCAGGTCCGAGATaGCGCCGGGGGCGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLPPGPR*RRGRQG
Trigger: ACCTTGGCGCCCCCGGCGCCATCTCGGACCTGGAGG...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCCCGCCGACGTCCTTCTaGTGCACCTGGGCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSPPTSF*CTWAQK
Trigger: CTTCTGCGCCCAGGTGCAGCAGAAGGACGTCGGCGG...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCGCTCGGCCTGCAGCCTaGAGACACCCGGAGCACTGT +
Preference number: 4 (lower is better)
Translates to: PKKLQLMTCITITQTESSARPAA*RHPEHC
Trigger: ACAGTGCTCCGGGTGTCTGCAGGCTGCAGGCCGAGC...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461133.8
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTCCTCCAGGTCCGAGATaGCGCCGGGGGCGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLPPGPR*RRGRQG
Trigger: ACCTTGGCGCCCCCGGCGCCATCTCGGACCTGGAGG...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR CCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCCGGAGGTGGTGGAGGTaGCTGCGGAAACCGCTGGGA +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSRRWWR*LRKPLG
Trigger: TCCCAGCGGTTTCCGCAGCCACCTCCACCACCTCCG...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399362.8
CDS-3UTR TCA 90 bp AAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTAGTCCGCCTGCCAGTCTGTaGGCGGCCAACTTTCGCCGA +
Preference number: 4 (lower is better)
Translates to: KLQLMTCITITQTESSCSPPASL*AANFRR
Trigger: TCGGCGAAAGTTGGCCGCTCACAGACTGGCAGGCGG...ACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359576.9
ENST00000399362.8
CDS-3UTR TCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTAACCCACCCAGCCGGTaGGCGCGTCGACTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPNPPSR*ARRLSC
Trigger: GCAAGACAGTCGACGCGCTCACCGGCTGGGTGGGTT...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR TCA 90 bp ACCAATTACCGCATGAACAGCCACCAGGCAGAAGACACAAGCTTTCCGAACACTGAGCGTGGAGAGGAGTaGGTAGGCATTGAATGGAGC +
Preference number: 4 (lower is better)
Translates to: TNYRMNSHQAEDTSFPNTERGEE*VGIEWS
Trigger: GCTCCATTCAATGCCTACTCACTCCTCTCCACGCTC...AGTGTTCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTGTTCATGCGGTAATTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR GCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCCGCAGAAGTACTCCATaGTGCGGGGCTCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRRRSTP*CGAPWL
Trigger: CAGCCATGGAGCCCCGCAGCATGGAGTACTTCTGCG...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCCGCCGACGTCCTTCTaGTGCACCTGGGCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDPPTSF*CTWAQK
Trigger: CTTCTGCGCCCAGGTGCAGCAGAAGGACGTCGGCGG...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACGCGCGTCGACTGTCTTaGCTAGGCGGCCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDARRLS*LGGPGP
Trigger: AGGACCTGGGCCGCCTAGGCAAGACAGTCGACGCGC...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGATGATACCCGGTAGTTaGTCGAACCCACCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDEMIPGS*SNPPSR
Trigger: CCGGCTGGGTGGGTTCGAGCAACTACCGGGTATCAT...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTGCTCGGCCTGCAGCCTaGAGACACCCGGAGCACTGT +
Preference number: 4 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVARPAA*RHPEHC
Trigger: ACAGTGCTCCGGGTGTCTGCAGGCTGCAGGCCGAGC...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461133.8
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCGCTCGGCCTGCAGCCTaGAGACACCCGGAGCACTGT +
Preference number: 4 (lower is better)
Translates to: SHKRSPAVVQISPALFHIARPAA*RHPEHC
Trigger: ACAGTGCTCCGGGTGTCTGCAGGCTGCAGGCCGAGC...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461133.8
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGATAAGTACAGCTCAGTaGCTGCGCCACTGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDEISTAQ*LRHWAR
Trigger: CCGAGCCCAGTGGCGCAGGCACTGAGCTGTACTTAT...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461133.8
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGGGTCAGAACTCTTCCTaGAGACCCAGACCGGCTACC +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDEGQNSS*RPRPAT
Trigger: GGTAGCCGGTCTGGGTCTCCAGGAAGAGTTCTGACC...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTGGTCAGAACTCTTCCTaGAGACCCAGACCGGCTACC +
Preference number: 4 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELGQNSS*RPRPAT
Trigger: GGTAGCCGGTCTGGGTCTCCAGGAAGAGTTCTGACC...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CCAATTCCCTTCCCAAACCCCCTTAGAAACCAGTGGCTAGATGTGGTAGAAGTGATCAATGTCACTTCGTaGACGCTGCAGGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: PIPFPNPLRNQWLDVVEVINVTS*TLQASW
Trigger: CCAGGAAGCCTGCAGCGTTCACGAAGTGACATTGAT...CACTTCTACCACATCTAGCCACTGGTTTCTAAGGGGGTTTGGGAAGGGAATTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR GCA 90 bp CCAATTCCCTTCCCAAACCCCCTTAGAAACCAGTGGCTAGATGTGGTAGAAGTGTCACTTCGTGAACGCTaGAGGCTTCCTGGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: PIPFPNPLRNQWLDVVEVSLRER*RLPGRE
Trigger: TTCCCTTCCAGGAAGCCTGCAGCGTTCACGAAGTGA...CACTTCTACCACATCTAGCCACTGGTTTCTAAGGGGGTTTGGGAAGGGAATTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR GCA 90 bp TGTCCAGAAACATCAGTAGTGGGATCAGCTCCTCCAGAACCTGTTTGTGCACGTAGTAGCATCACCTCCTaGTCTTGGGTCAGACATCCC +
Preference number: 4 (lower is better)
Translates to: CPETSVVGSAPPEPVCARSSITS*SWVRHP
Trigger: GGGATGTCTGACCCAAGAGCAGGAGGTGATGCTACT...ACGTGCACAAACAGGTTCTGGAGGAGCTGATCCCACTACTGATGTTTCTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR GCA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCGCCTCGCTGCAGCTCTaGACCGCAATAGCCAACAGC +
Preference number: 4 (lower is better)
Translates to: PKKLQLMTCITITQTESSASLQL*TAIANS
Trigger: GCTGTTGGCTATTGCGGTGCAGAGCTGCAGCGAGGC...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTACGCTGCAGGCTTCCTaGAAGGGAACTGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELTLQAS*KGTGFA
Trigger: AGCAAAGCCAGTTCCCTTCCAGGAAGCCTGCAGCGT...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGACGCTGCAGGCTTCCTaGAAGGGAACTGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDETLQAS*KGTGFA
Trigger: AGCAAAGCCAGTTCCCTTCCAGGAAGCCTGCAGCGT...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCGGTCAGAACTCTTCCTaGAGACCCAGACCGGCTACC +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRGQNSS*RPRPAT
Trigger: GGTAGCCGGTCTGGGTCTCCAGGAAGAGTTCTGACC...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCACCAGAGCTCACAGTaGACAGGGCTGTTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDEHQSSQ*TGLLWS
Trigger: TGACCACAACAGCCCTGTCCACTGTGAGCTCTGGTG...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GGAAAGTTAGATACAAGCCAATTCCCTTCCCAAACCCCCTTAGAAACCAGTGGCTTTGCTGCTGCCTGCTaGTACTCTTCCAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: GKLDTSQFPSQTPLETSGFAAAC*YSSSHS
Trigger: ACTGTGGCTGGAAGAGTATCAGCAGGCAGCAGCAAA...GCCACTGGTTTCTAAGGGGGTTTGGGAAGGGAATTGGCTTGTATCTAACTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR TCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGTTTGCTGCTGCCTGCTaGTACTCTTCCAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDEFAAAC*YSSSHS
Trigger: ACTGTGGCTGGAAGAGTATCAGCAGGCAGCAGCAAA...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATACTGCTTCGGGCCACTaGAAGCCTAGATGGACTAGC +
Preference number: 4 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDTASGH*KPRWTS
Trigger: GCTAGTCCATCTAGGCTTTCAGTGGCCCGAAGCAGT...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGGGACCAGTTAGCTGGTaGTCGTGGTGTTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDEGPVSW*SWCWSC
Trigger: ACAAGACCAACACCACGATCACCAGCTAACTGGTCC...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCGTGGAGAGGAGTaGGTAGGCATTGAATGGAGC +
Preference number: 4 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDERGEE*VGIEWS
Trigger: GCTCCATTCAATGCCTACTCACTCCTCTCCACGCTC...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCGAGCGTGGAGAGGAGTaGGTAGGCATTGAATGGAGC +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRERGEE*VGIEWS
Trigger: GCTCCATTCAATGCCTACTCACTCCTCTCCACGCTC...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTTCACCAATTACCGCATaGACAGCCACCAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELSPITA*TATRQK
Trigger: CTTCTGCCTGGTGGCTGTTCATGCGGTAATTGGTGA...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp CCAATTCCCTTCCCAAACCCCCTTAGAAACCAGTGGCTAGATGTGGTAGAAGTGCATGTATGTCTTTCTTaGCTCCACTCTGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: PIPFPNPLRNQWLDVVEVHVCLS*LHSGLS
Trigger: GCTGAGGCCAGAGTGGAGGCAAGAAAGACATACATG...CACTTCTACCACATCTAGCCACTGGTTTCTAAGGGGGTTTGGGAAGGGAATTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR GCA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTGGGAACTGGCTTTGCTaGTGCCTGCTGATACTCTTC +
Preference number: 4 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELGNWLC*CLLILF
Trigger: GAAGAGTATCAGCAGGCAGCAGCAAAGCCAGTTCCC...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GGAAAGTTAGATACAAGCCAATTCCCTTCCCAAACCCCCTTAGAAACCAGTGGCGAAGGGAACTGGCTTTaGTGCTGCCTGCTGATACTC +
Preference number: 4 (lower is better)
Translates to: GKLDTSQFPSQTPLETSGEGNWL*CCLLIL
Trigger: GAGTATCAGCAGGCAGCAGCAAAGCCAGTTCCCTTC...GCCACTGGTTTCTAAGGGGGTTTGGGAAGGGAATTGGCTTGTATCTAACTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR GCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGGAAGGGAACTGGCTTTaGTGCTGCCTGCTGATACTC +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDEEGNWL*CCLLIL
Trigger: GAGTATCAGCAGGCAGCAGCAAAGCCAGTTCCCTTC...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp AAAGTTAGATACAAGCCAATTCCCTTCCCAAACCCCCTTAGAAACCAGTGGCTATCCAGCAGCATGATGTaGCTTGGCACCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KVRYKPIPFPNPLRNQWLSSSMM*LGTCSS
Trigger: GCTGCTGCAGGTGCCAAGGCACATCATGCTGCTGGA...TAGCCACTGGTTTCTAAGGGGGTTTGGGAAGGGAATTGGCTTGTATCTAACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR GCA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGAGAAGTACTCCATGCTaGGGGGCTCCATGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLRSTPC*GAPWLR
Trigger: CCGCAGCCATGGAGCCCCGCAGCATGGAGTACTTCT...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTAGAAGTACTCCATGCTaGGGGGCTCCATGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPRSTPC*GAPWLR
Trigger: CCGCAGCCATGGAGCCCCGCAGCATGGAGTACTTCT...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTCGCAGAAGTACTCCATaGTGCGGGGCTCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPRRSTP*CGAPWL
Trigger: CAGCCATGGAGCCCCGCAGCATGGAGTACTTCTGCG...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGCCGACGTCCTTCTGCTaGACCTGGGCGCAGAAGTAC +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLPTSFC*TWAQKY
Trigger: GTACTTCTGCGCCCAGGTGCAGCAGAAGGACGTCGG...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCCGACGTCCTTCTGCTaGACCTGGGCGCAGAAGTAC +
Preference number: 4 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDPTSFC*TWAQKY
Trigger: GTACTTCTGCGCCCAGGTGCAGCAGAAGGACGTCGG...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTTTCCTTAGAAGCACCTaGTCCAACCTTAGGGCCACC +
Preference number: 4 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELFLRST*SNLRAT
Trigger: GGTGGCCCTAAGGTTGGAGCAGGTGCTTCTAAGGAA...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359576.9
ENST00000468888.6
CDS-3UTR GCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCGTCGAGGAATACGACTaGTTCGGGCCACTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRVEEYD*FGPLKA
Trigger: GGCTTTCAGTGGCCCGAAGCAGTCGTATTCCTCGAC...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTAGTAGCATCACCTCCTaGTCTTGGGTCAGACATCCC +
Preference number: 4 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELSSITS*SWVRHP
Trigger: GGGATGTCTGACCCAAGAGCAGGAGGTGATGCTACT...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGCGGCTAGCGTTTTGCTaGGGAGGTGGTGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLRLAFC*GGGGGG
Trigger: GCCACCTCCACCACCTCCGCAGCAAAACGCTAGCCG...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399362.8
CDS-3UTR GCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGCCTCGCTGCAGCTCTaGACCGCAATAGCCAACAGC +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLASLQL*TAIANS
Trigger: GCTGTTGGCTATTGCGGTGCAGAGCTGCAGCGAGGC...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTTTCTTGCCTCCACTCTaGCCTCAGCGTCAGCATCAT +
Preference number: 4 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELFLPPL*PQRQHH
Trigger: ATGATGCTGACGCTGAGGCCAGAGTGGAGGCAAGAA...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCACGCTGCAGGCTTCCTaGAAGGGAACTGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRTLQAS*KGTGFA
Trigger: AGCAAAGCCAGTTCCCTTCCAGGAAGCCTGCAGCGT...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATTCCTTCTGCTGCACCTaGGCGCAGAAGTACTCCATG +
Preference number: 4 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDSFCCT*AQKYSM
Trigger: CATGGAGTACTTCTGCGCCCAGGTGCAGCAGAAGGA...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR CCA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATATCACCTCCTGCTCTTaGGTCAGACATCCCAGGACC +
Preference number: 4 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDITSCS*VRHPRT
Trigger: GGTCCTGGGATGTCTGACCCAAGAGCAGGAGGTGAT...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTTTGCTGCTGCCTGCTaGTACTCTTCCAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRFAAAC*YSSSHS
Trigger: ACTGTGGCTGGAAGAGTATCAGCAGGCAGCAGCAAA...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCATCAATGTCACTTCGTaGACGCTGCAGGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRINVTS*TLQASW
Trigger: CCAGGAAGCCTGCAGCGTTCACGAAGTGACATTGAT...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp TTTAGGGTTTGGTTAGACAGAGTAGAGCTTTGCAGTTCTCCCAGATCTCCAAAAGACTGTCCAGCAGCATaGTGTGCCTTGGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: FRVWLDRVELCSSPRSPKDCPAA*CALAPA
Trigger: TGCAGGTGCCAAGGCACATCATGCTGCTGGACAGTC...TTTTGGAGATCTGGGAGAACTGCAAAGCTCTACTCTGTCTAACCAAACCCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR TCA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTGACTGTCCAGCAGCATaGTGTGCCTTGGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVDCPAA*CALAPA
Trigger: TGCAGGTGCCAAGGCACATCATGCTGCTGGACAGTC...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCGACTGTCCAGCAGCATaGTGTGCCTTGGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: SHKRSPAVVQISPALFHIDCPAA*CALAPA
Trigger: TGCAGGTGCCAAGGCACATCATGCTGCTGGACAGTC...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCCGGCTACCAGGCTGTaGTTGAGACACCATTTTTGT +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDEPATRL*LRHHFC
Trigger: ACAAAAATGGTGTCTCAATCACAGCCTGGTAGCCGG...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGTTGACCAGGACTCTTTaGACACCAGAGCTCACAGTG +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDELTRTL*TPELTV
Trigger: CACTGTGAGCTCTGGTGTTCAAAGAGTCCTGGTCAA...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGGTGCTGAGGCTGAATTaGCCAGGACTCTTTGAACAC +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDEVLRLN*PGLFEH
Trigger: GTGTTCAAAGAGTCCTGGTCAATTCAGCCTCAGCAC...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCACTGCTTCGGGCCACTaGAAGCCTAGATGGACTAGC +
Preference number: 4 (lower is better)
Translates to: PKKLQLMTCITITQTESSTASGH*KPRWTS
Trigger: GCTAGTCCATCTAGGCTTTCAGTGGCCCGAAGCAGT...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTCCTGGACCGAGGGGCTaGAAAGAGCGAACAGGACTT +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPPGPRG*KERTGL
Trigger: AAGTCCTGTTCGCTCTTTTCAGCCCCTCGGTCCAGG...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000635664.1
CDS-3UTR TCA 90 bp TTGATGCACTGCTCTGGACTAATTGAAGTGGCCAACACTGATGCCGCTTCCTCAAAGAGCTGTTTGACTTaGGTCAGTAGCATCACCTCC +
Preference number: 4 (lower is better)
Translates to: LMHCSGLIEVANTDAASSKSCLT*VSSITS
Trigger: GGAGGTGATGCTACTGACTCAAGTCAAACAGCTCTT...TGAGGAAGCGGCATCAGTGTTGGCCACTTCAATTAGTCCAGAGCAGTGCATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR TCA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCGAGCGTGGAGAGGAGTaGGTAGGCATTGAATGGAGC +
Preference number: 4 (lower is better)
Translates to: PKKLQLMTCITITQTESSERGEE*VGIEWS
Trigger: GCTCCATTCAATGCCTACTCACTCCTCTCCACGCTC...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp ACCAATTACCGCATGAACAGCCACCAGGCAGAAGACACAAGCTTTCCGAACACTATCTGTCCTTTCTTTTaGGAGACCTGGTTCGCTGTG +
Preference number: 4 (lower is better)
Translates to: TNYRMNSHQAEDTSFPNTICPFF*ETWFAV
Trigger: CACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGAT...AGTGTTCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTGTTCATGCGGTAATTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR TCA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCCCATAACCTGGACCTaGGGCCCCATACACTTCGGG +
Preference number: 4 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFPITWT*GPIHFG
Trigger: CCCGAAGTGTATGGGGCCTCAGGTCCAGGTTATGGG...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCGTCGACTTGATTGGCTaGTCCCATAACCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRVDLIG*SHNLDL
Trigger: CAGGTCCAGGTTATGGGATCAGCCAATCAAGTCGAC...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGGGAACTGGCTTTGCTaGTGCCTGCTGATACTCTTC +
Preference number: 4 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDGNWLC*CLLILF
Trigger: GAAGAGTATCAGCAGGCAGCAGCAAAGCCAGTTCCC...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCGAAGGGAACTGGCTTTaGTGCTGCCTGCTGATACTC +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVREGNWL*CCLLIL
Trigger: GAGTATCAGCAGGCAGCAGCAAAGCCAGTTCCCTTC...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp AAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTAGTTCCAGCAGCATGATGTaGCTTGGCACCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KLQLMTCITITQTESSCSSSSMM*LGTCSS
Trigger: GCTGCTGCAGGTGCCAAGGCACATCATGCTGCTGGA...ACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTTCCAGCAGCATGATGTaGCTTGGCACCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVSSSMM*LGTCSS
Trigger: GCTGCTGCAGGTGCCAAGGCACATCATGCTGCTGGA...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAAGTACTCCATGCTaGGGGGCTCCATGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLRSTPC*GAPWLR
Trigger: CCGCAGCCATGGAGCCCCGCAGCATGGAGTACTTCT...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGATGATACCCGGTAGTTaGTCGAACCCACCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLMIPGS*SNPPSR
Trigger: CCGGCTGGGTGGGTTCGAGCAACTACCGGGTATCAT...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCGTCGAGGAATACGACTaGTTCGGGCCACTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: PKKLQLMTCITITQTESSVEEYD*FGPLKA
Trigger: GGCTTTCAGTGGCCCGAAGCAGTCGTATTCCTCGAC...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCAGTAGCATCACCTCCTaGTCTTGGGTCAGACATCCC +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRSSITS*SWVRHP
Trigger: GGGATGTCTGACCCAAGAGCAGGAGGTGATGCTACT...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCGTCCGGCTAGCGTTTTaGTGCGGAGGTGGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: QITLQQWQTASLIAICLFVRLAF*CGGGGG
Trigger: ACCTCCACCACCTCCGCAGCAAAACGCTAGCCGGAC...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399362.8
CDS-3UTR GCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGATAAGTACAGCTCAGTaGCTGCGCCACTGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLISTAQ*LRHWAR
Trigger: CCGAGCCCAGTGGCGCAGGCACTGAGCTGTACTTAT...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461133.8
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCCTGAGAGCCAATAAATaGCATCCCGCTGGGGGACTT +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRLRANK*HPAGGL
Trigger: AAGTCCCCCAGCGGGATGGCATTTATTGGCTCTCAG...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACGGTCAGAACTCTTCCTaGAGACCCAGACCGGCTACC +
Preference number: 4 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDGQNSS*RPRPAT
Trigger: GGTAGCCGGTCTGGGTCTCCAGGAAGAGTTCTGACC...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTCAGAACTCTTCCTaGAGACCCAGACCGGCTACC +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPGQNSS*RPRPAT
Trigger: GGTAGCCGGTCTGGGTCTCCAGGAAGAGTTCTGACC...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATTCTCTGCTACAGCCCTaGCTCCGTGGTATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDSLLQP*LRGILL
Trigger: AAGCAAGATACCACGGAGCCAGGGCTGTAGCAGAGA...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTCTCTGCTACAGCCCTaGCTCCGTGGTATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRSLLQP*LRGILL
Trigger: AAGCAAGATACCACGGAGCCAGGGCTGTAGCAGAGA...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTCTCCCCATGGAACTCTaGGTTCCATTGCCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELLPMEL*VPLPVF
Trigger: AAACACTGGCAATGGAACCCAGAGTTCCATGGGGAG...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCATCACCTCCTGCTCTTaGGTCAGACATCCCAGGACC +
Preference number: 4 (lower is better)
Translates to: PKKLQLMTCITITQTESSITSCS*VRHPRT
Trigger: GGTCCTGGGATGTCTGACCCAAGAGCAGGAGGTGAT...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGCCAGTTGATCTGGAATaGTGTCTGGAGGCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLPVDLE*CLEARG
Trigger: GCCCCTCGCCTCCAGACACCATTCCAGATCAACTGG...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCGGGCACCAGTTGATCTaGAATGGTGTCTGGAGGCGA +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSGHQLI*NGVWRR
Trigger: TCGCCTCCAGACACCATTCCAGATCAACTGGTGCCC...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTGACTGTCCAGCAGCATaGTGTGCCTTGGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLDCPAA*CALAPA
Trigger: TGCAGGTGCCAAGGCACATCATGCTGCTGGACAGTC...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AAAGAAAACAGGAAAGTTAGATACAAGCCAATTCCCTTCCCAAACCCCCTTAGAGACTGTCCAGCAGCATaGTGTGCCTTGGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: KENRKVRYKPIPFPNPLRDCPAA*CALAPA
Trigger: TGCAGGTGCCAAGGCACATCATGCTGCTGGACAGTC...TCTAAGGGGGTTTGGGAAGGGAATTGGCTTGTATCTAACTTTCCTGTTTTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR TCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCCGCCTGCCAGTCTGTaGGCGGCCAACTTTCGCCGA +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFPPASL*AANFRR
Trigger: TCGGCGAAAGTTGGCCGCTCACAGACTGGCAGGCGG...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359576.9
ENST00000399362.8
CDS-3UTR TCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCGTGCTGAGGCTGAATTaGCCAGGACTCTTTGAACAC +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRVLRLN*PGLFEH
Trigger: GTGTTCAAAGAGTCCTGGTCAATTCAGCCTCAGCAC...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACACTGCTTCGGGCCACTaGAAGCCTAGATGGACTAGC +
Preference number: 4 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDTASGH*KPRWTS
Trigger: GCTAGTCCATCTAGGCTTTCAGTGGCCCGAAGCAGT...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTCCTGGACCGAGGGGCTaGAAAGAGCGAACAGGACTT +
Preference number: 4 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLPGPRG*KERTGL
Trigger: AAGTCCTGTTCGCTCTTTTCAGCCCCTCGGTCCAGG...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000635664.1
CDS-3UTR TCA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCCCTGGACCGAGGGGCTaGAAAGAGCGAACAGGACTT +
Preference number: 4 (lower is better)
Translates to: QITLQQWQTASLIAICLFPGPRG*KERTGL
Trigger: AAGTCCTGTTCGCTCTTTTCAGCCCCTCGGTCCAGG...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR TCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCGTCGACTTGATTGGCTaGTCCCATAACCTGGACCGA +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSVDLIG*SHNLDR
Trigger: TCGGTCCAGGTTATGGGATCAGCCAATCAAGTCGAC...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000635664.1
CDS-3UTR TCA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATAGACGACAGTCGACTTaGTTGGCTGATCCCATAACC +
Preference number: 4 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDRRQST*LADPIT
Trigger: GGTTATGGGATCAGCCAATCAAGTCGACTGTCGTCT...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGAAGAGCTGTTTGACTTaGGTCAGTAGCATCACCTCC +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDEKSCLT*VSSITS
Trigger: GGAGGTGATGCTACTGACTCAAGTCAAACAGCTCTT...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTAAGAGCTGTTTGACTTaGGTCAGTAGCATCACCTCC +
Preference number: 4 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELKSCLT*VSSITS
Trigger: GGAGGTGATGCTACTGACTCAAGTCAAACAGCTCTT...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGAGCGTGGAGAGGAGTaGGTAGGCATTGAATGGAGC +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPERGEE*VGIEWS
Trigger: GCTCCATTCAATGCCTACTCACTCCTCTCCACGCTC...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTCACCAATTACCGCATaGACAGCCACCAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PKKLQLMTCITITQTESSSPITA*TATRQK
Trigger: CTTCTGCCTGGTGGCTGTTCATGCGGTAATTGGTGA...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp TTACCGCATGAACAGCCACCAGGCAGAAGACACAAGCTTTCCGAACACTGCTCTGTATCTACCTCCTTATaGGGATCTTTATGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LPHEQPPGRRHKLSEHCSVSTSL*GSLCAS
Trigger: GGAAGCACATAAAGATCCTCATAAGGAGGTAGATAC...AGAGCAGTGTTCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTGTTCATGCGGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR GCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCCATGTATGTCTTTCTTaGCTCCACTCTGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRHVCLS*LHSGLS
Trigger: GCTGAGGCCAGAGTGGAGGCAAGAAAGACATACATG...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATCATGTATGTCTTTCTTaGCTCCACTCTGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDHVCLS*LHSGLS
Trigger: GCTGAGGCCAGAGTGGAGGCAAGAAAGACATACATG...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp TTGGTTAGACAGAGTAGAGCTTTGCAGTTCTCCCAGATCTCCAAAAGGCTTCACAACTGGCTTTGCTGCTaGCTGCTGATACTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: LVRQSRALQFSQISKRLHNWLCC*LLILFQ
Trigger: CTGGAAGAGTATCAGCAGGCAGCAGCAAAGCCAGTT...GTGAAGCCTTTTGGAGATCTGGGAGAACTGCAAAGCTCTACTCTGTCTAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR GCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCGAAGGGAACTGGCTTTaGTGCTGCCTGCTGATACTC +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSEGNWL*CCLLIL
Trigger: GAGTATCAGCAGGCAGCAGCAAAGCCAGTTCCCTTC...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTCACTTCGTGAACGCTaGAGGCTTCCTGGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSSLRER*RLPGRE
Trigger: TTCCCTTCCAGGAAGCCTGCAGCGTTCACGAAGTGA...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTTCCAGCAGCATGATGTaGCTTGGCACCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFSSSMM*LGTCSS
Trigger: GCTGCTGCAGGTGCCAAGGCACATCATGCTGCTGGA...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp AAGAAAACAGGAAAGTTAGATACAAGCCAATTCCCTTCCCAAACCCCCTTAGAATCCAGCAGCATGATGTaGCTTGGCACCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KKTGKLDTSQFPSQTPLESSSMM*LGTCSS
Trigger: GCTGCTGCAGGTGCCAAGGCACATCATGCTGCTGGA...TTCTAAGGGGGTTTGGGAAGGGAATTGGCTTGTATCTAACTTTCCTGTTTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR GCA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTCCAGCAGCATGATGTaGCTTGGCACCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLSSSMM*LGTCSS
Trigger: GCTGCTGCAGGTGCCAAGGCACATCATGCTGCTGGA...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAACCGCCGACGTCCTTCTaGTGCACCTGGGCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKPPTSF*CTWAQK
Trigger: CTTCTGCGCCCAGGTGCAGCAGAAGGACGTCGGCGG...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGGTCGAGGAATACGACTaGTTCGGGCCACTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLVEEYD*FGPLKA
Trigger: GGCTTTCAGTGGCCCGAAGCAGTCGTATTCCTCGAC...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp AAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTAGTGTCGAGGAATACGACTaGTTCGGGCCACTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: KLQLMTCITITQTESSCSVEEYD*FGPLKA
Trigger: GGCTTTCAGTGGCCCGAAGCAGTCGTATTCCTCGAC...ACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCAGTAGCATCACCTCCTaGTCTTGGGTCAGACATCCC +
Preference number: 4 (lower is better)
Translates to: PKKLQLMTCITITQTESSSSITS*SWVRHP
Trigger: GGGATGTCTGACCCAAGAGCAGGAGGTGATGCTACT...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCAGTAGCATCACCTCCTaGTCTTGGGTCAGACATCCC +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSSSITS*SWVRHP
Trigger: GGGATGTCTGACCCAAGAGCAGGAGGTGATGCTACT...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp AAAGTTAGATACAAGCCAATTCCCTTCCCAAACCCCCTTAGAAACCAGTGGCTATTCTTGCCTCCACTCTaGCCTCAGCGTCAGCATCAT +
Preference number: 4 (lower is better)
Translates to: KVRYKPIPFPNPLRNQWLFLPPL*PQRQHH
Trigger: ATGATGCTGACGCTGAGGCCAGAGTGGAGGCAAGAA...TAGCCACTGGTTTCTAAGGGGGTTTGGGAAGGGAATTGGCTTGTATCTAACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR CCA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTTCTTGCCTCCACTCTaGCCTCAGCGTCAGCATCAT +
Preference number: 4 (lower is better)
Translates to: PKKLQLMTCITITQTESSFLPPL*PQRQHH
Trigger: ATGATGCTGACGCTGAGGCCAGAGTGGAGGCAAGAA...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTCTTGCCTCCACTCTaGCCTCAGCGTCAGCATCAT +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSFLPPL*PQRQHH
Trigger: ATGATGCTGACGCTGAGGCCAGAGTGGAGGCAAGAA...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTGACTTTCCTGTGAGCTaGATGAGGACCTGTCTGATT +
Preference number: 4 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELDFPVS*MRTCLI
Trigger: AATCAGACAGGTCCTCATCCAGCTCACAGGAAAGTC...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGGACTTTCCTGTGAGCTaGATGAGGACCTGTCTGATT +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDEDFPVS*MRTCLI
Trigger: AATCAGACAGGTCCTCATCCAGCTCACAGGAAAGTC...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGACGCTGCAGGCTTCCTaGAAGGGAACTGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLTLQAS*KGTGFA
Trigger: AGCAAAGCCAGTTCCCTTCCAGGAAGCCTGCAGCGT...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTCTCACCTGACTGTTaGAGTCTCCAAACAGGATAC +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDELSPDC*SLQTGY
Trigger: GTATCCTGTTTGGAGACTCCAACAGTCAGGTGAGAG...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR CCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCCACCAGAGCTCACAGTaGACAGGGCTGTTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: SHKRSPAVVQISPALFHIHQSSQ*TGLLWS
Trigger: TGACCACAACAGCCCTGTCCACTGTGAGCTCTGGTG...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGCACCAGAGCTCACAGTaGACAGGGCTGTTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLHQSSQ*TGLLWS
Trigger: TGACCACAACAGCCCTGTCCACTGTGAGCTCTGGTG...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTCACCAGAGCTCACAGTaGACAGGGCTGTTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPHQSSQ*TGLLWS
Trigger: TGACCACAACAGCCCTGTCCACTGTGAGCTCTGGTG...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCACCAGAGCTCACAGTaGACAGGGCTGTTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDHQSSQ*TGLLWS
Trigger: TGACCACAACAGCCCTGTCCACTGTGAGCTCTGGTG...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGTCCTTGACTCACACTTaGTCGAGGAATACGACTGCT +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDESLTHT*SRNTTA
Trigger: AGCAGTCGTATTCCTCGACCAAGTGTGAGTCAAGGA...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTTCCTTGACTCACACTTaGTCGAGGAATACGACTGCT +
Preference number: 4 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELSLTHT*SRNTTA
Trigger: AGCAGTCGTATTCCTCGACCAAGTGTGAGTCAAGGA...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGATCACCTCCTGCTCTTaGGTCAGACATCCCAGGACC +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLITSCS*VRHPRT
Trigger: GGTCCTGGGATGTCTGACCCAAGAGCAGGAGGTGAT...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp TTACCGCATGAACAGCCACCAGGCAGAAGACACAAGCTTTCCGAACACTGCTCTTCTACACGCTCATTATaGTTAGACAGCTCCTTCAAC +
Preference number: 4 (lower is better)
Translates to: LPHEQPPGRRHKLSEHCSSTRSL*LDSSFN
Trigger: GTTGAAGGAGCTGTCTAACCATAATGAGCGTGTAGA...AGAGCAGTGTTCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTGTTCATGCGGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR CCA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTTTGCTGCGGAGGTGGTaGAGGTGGCTGCGGAAACCG +
Preference number: 4 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFLLRRW*RWLRKP
Trigger: CGGTTTCCGCAGCCACCTCCACCACCTCCGCAGCAA...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399362.8
CDS-3UTR TCA 90 bp TTGGTTAGACAGAGTAGAGCTTTGCAGTTCTCCCAGATCTCCAAAAGGCTTCACAGTGCATTGGCACGCTaGTCCCAGTCATGTTTATCA +
Preference number: 4 (lower is better)
Translates to: LVRQSRALQFSQISKRLHSALAR*SQSCLS
Trigger: TGATAAACATGACTGGGATCAGCGTGCCAATGCACT...GTGAAGCCTTTTGGAGATCTGGGAGAACTGCAAAGCTCTACTCTGTCTAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR TCA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATAGTGCATTGGCACGCTaGTCCCAGTCATGTTTATCA +
Preference number: 4 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDSALAR*SQSCLS
Trigger: TGATAAACATGACTGGGATCAGCGTGCCAATGCACT...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTATCCAGAAGTTGCCATaGCTTTTGCACTATTGGGGA +
Preference number: 4 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELIQKLP*LLHYWG
Trigger: TCCCCAATAGTGCAAAAGTCATGGCAACTTCTGGAT...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTTGCATGTCTTTCCAATaGATGAGTCTGCCACTCTTG +
Preference number: 4 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELCMSFQ*MSLPLL
Trigger: CAAGAGTGGCAGACTCATTCATTGGAAAGACATGCA...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GACAGAGTAGAGCTTTGCAGTTCTCCCAGATCTCCAAAAGGCTTCACATTCTTGTCTTCCAGCCACAGTTaGTGGATTTGCTGTAGACCA +
Preference number: 4 (lower is better)
Translates to: DRVELCSSPRSPKGFTFLSSSHS*WICCRP
Trigger: TGGTCTACAGCAAATCCATCAACTGTGGCTGGAAGA...CAAGAATGTGAAGCCTTTTGGAGATCTGGGAGAACTGCAAAGCTCTACTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR TCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTCTTCCAGCCACAGTTaGTGGATTTGCTGTAGACCA +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRSSSHS*WICCRP
Trigger: TGGTCTACAGCAAATCCATCAACTGTGGCTGGAAGA...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTTTGCTGCTGCCTGCTaGTACTCTTCCAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLFAAAC*YSSSHS
Trigger: ACTGTGGCTGGAAGAGTATCAGCAGGCAGCAGCAAA...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGTTTGCTGCTGCCTGCTaGTACTCTTCCAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLFAAAC*YSSSHS
Trigger: ACTGTGGCTGGAAGAGTATCAGCAGGCAGCAGCAAA...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACTTTGCTGCTGCCTGCTaGTACTCTTCCAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDFAAAC*YSSSHS
Trigger: ACTGTGGCTGGAAGAGTATCAGCAGGCAGCAGCAAA...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CCAGTGGCTAGATGTGGTAGAAGTGCAGTTATGAAAATTCTACAGGCAATCATGTTTGCTGCTGCCTGCTaGTACTCTTCCAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: PVARCGRSAVMKILQAIMFAAAC*YSSSHS
Trigger: ACTGTGGCTGGAAGAGTATCAGCAGGCAGCAGCAAA...CATGATTGCCTGTAGAATTTTCATAACTGCACTTCTACCACATCTAGCCACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR TCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCATCAATGTCACTTCGTaGACGCTGCAGGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: SHKRSPAVVQISPALFHIINVTS*TLQASW
Trigger: CCAGGAAGCCTGCAGCGTTCACGAAGTGACATTGAT...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGATCAATGTCACTTCGTaGACGCTGCAGGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLINVTS*TLQASW
Trigger: CCAGGAAGCCTGCAGCGTTCACGAAGTGACATTGAT...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGATCAATGTCACTTCGTaGACGCTGCAGGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLINVTS*TLQASW
Trigger: CCAGGAAGCCTGCAGCGTTCACGAAGTGACATTGAT...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTATCAATGTCACTTCGTaGACGCTGCAGGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVINVTS*TLQASW
Trigger: CCAGGAAGCCTGCAGCGTTCACGAAGTGACATTGAT...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTGCAGCATCTCTCACCTaGCTGTTGGAGTCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVAASLT*LLESPN
Trigger: GTTTGGAGACTCCAACAGTCAGGTGAGAGATGCTGC...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR TCA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCCCGGCTACCAGGCTGTaGTTGAGACACCATTTTTGT +
Preference number: 4 (lower is better)
Translates to: PKKLQLMTCITITQTESSPATRL*LRHHFC
Trigger: ACAAAAATGGTGTCTCAATCACAGCCTGGTAGCCGG...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTGACCAGGACTCTTTaGACACCAGAGCTCACAGTG +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSLTRTL*TPELTV
Trigger: CACTGTGAGCTCTGGTGTTCAAAGAGTCCTGGTCAA...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTACTGCTTCGGGCCACTaGAAGCCTAGATGGACTAGC +
Preference number: 4 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFTASGH*KPRWTS
Trigger: GCTAGTCCATCTAGGCTTTCAGTGGCCCGAAGCAGT...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTACTGCTTCGGGCCACTaGAAGCCTAGATGGACTAGC +
Preference number: 4 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLTASGH*KPRWTS
Trigger: GCTAGTCCATCTAGGCTTTCAGTGGCCCGAAGCAGT...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGACTGCTTCGGGCCACTaGAAGCCTAGATGGACTAGC +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLTASGH*KPRWTS
Trigger: GCTAGTCCATCTAGGCTTTCAGTGGCCCGAAGCAGT...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTCGACTTGATTGGCTaGTCCCATAACCTGGACCGA +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLVDLIG*SHNLDR
Trigger: TCGGTCCAGGTTATGGGATCAGCCAATCAAGTCGAC...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000635664.1
CDS-3UTR TCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGGTCGACTTGATTGGCTaGTCCCATAACCTGGACCGA +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLVDLIG*SHNLDR
Trigger: TCGGTCCAGGTTATGGGATCAGCCAATCAAGTCGAC...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000635664.1
CDS-3UTR TCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGTCGACTTGATTGGCTaGTCCCATAACCTGGACCGA +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPVDLIG*SHNLDR
Trigger: TCGGTCCAGGTTATGGGATCAGCCAATCAAGTCGAC...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000635664.1
CDS-3UTR TCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCAGACGACAGTCGACTTaGTTGGCTGATCCCATAACC +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSRRQST*LADPIT
Trigger: GGTTATGGGATCAGCCAATCAAGTCGACTGTCGTCT...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTACTATAGGAGCGTTCTaGACAAGCACTAGATGCATC +
Preference number: 4 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELTIGAF*TSTRCI
Trigger: GATGCATCTAGTGCTTGTTCAGAACGCTCCTATAGT...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGGGACCAGTTAGCTGGTaGTCGTGGTGTTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLGPVSW*SWCWSC
Trigger: ACAAGACCAACACCACGATCACCAGCTAACTGGTCC...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp AAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTAGTGGACCAGTTAGCTGGTaGTCGTGGTGTTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: KLQLMTCITITQTESSCSGPVSW*SWCWSC
Trigger: ACAAGACCAACACCACGATCACCAGCTAACTGGTCC...ACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCCTTGGCTACGGAAGCTaGAATTCTGGATTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRLGYGS*NSGLLQ
Trigger: CTGAAGCAATCCAGAATTTCAGCTTCCGTAGCCAAG...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp TTACCGCATGAACAGCCACCAGGCAGAAGACACAAGCTTTCCGAACACTGCTCTTTATCAAGAGCTGTTTaGCTTGAGTCAGTAGCATCA +
Preference number: 4 (lower is better)
Translates to: LPHEQPPGRRHKLSEHCSLSRAV*LESVAS
Trigger: TGATGCTACTGACTCAAGTCAAACAGCTCTTGATAA...AGAGCAGTGTTCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTGTTCATGCGGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR TCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGGAGCGTGGAGAGGAGTaGGTAGGCATTGAATGGAGC +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLERGEE*VGIEWS
Trigger: GCTCCATTCAATGCCTACTCACTCCTCTCCACGCTC...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCGAGCGTGGAGAGGAGTaGGTAGGCATTGAATGGAGC +
Preference number: 4 (lower is better)
Translates to: QITLQQWQTASLIAICLFERGEE*VGIEWS
Trigger: GCTCCATTCAATGCCTACTCACTCCTCTCCACGCTC...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTGCAACTAGGTCAGAATaGTCTAGGGAAAGATCGTCA +
Preference number: 4 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELATRSE*SRERSS
Trigger: TGACGATCTTTCCCTAGATCATTCTGACCTAGTTGC...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp TGTCCAGAAACATCAGTAGTGGGATCAGCTCCTCCAGAACCTGTTTGTGCACGTCCGAACACTGCTCTCTaGATTATCATAACCCTGTAT +
Preference number: 4 (lower is better)
Translates to: CPETSVVGSAPPEPVCARPNTAL*IIITLY
Trigger: ATACAGGGTTATGATAATTCAGAGAGCAGTGTTCGG...ACGTGCACAAACAGGTTCTGGAGGAGCTGATCCCACTACTGATGTTTCTGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR TCA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTTCACCAATTACCGCATaGACAGCCACCAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVSPITA*TATRQK
Trigger: CTTCTGCCTGGTGGCTGTTCATGCGGTAATTGGTGA...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTCACCAATTACCGCATaGACAGCCACCAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLSPITA*TATRQK
Trigger: CTTCTGCCTGGTGGCTGTTCATGCGGTAATTGGTGA...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGTCTCCAAAAACATGCTaGATACCTTGCCATGAGGGT +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDESPKTC*IPCHEG
Trigger: ACCCTCATGGCAAGGTATTCAGCATGTTTTTGGAGA...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399362.8
ENST00000468888.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTTCTCCAAAAACATGCTaGATACCTTGCCATGAGGGT +
Preference number: 4 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELSPKTC*IPCHEG
Trigger: ACCCTCATGGCAAGGTATTCAGCATGTTTTTGGAGA...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399362.8
ENST00000468888.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGGTAGAGGGCACCAGTTaGTCTGGAATGGTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLVEGTS*SGMVSG
Trigger: TCCAGACACCATTCCAGATCAACTGGTGCCCTCTAC...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGGTCGACTTGATTGGCTaGTCCCATAACCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLVDLIG*SHNLDL
Trigger: CAGGTCCAGGTTATGGGATCAGCCAATCAAGTCGAC...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCAACTGGCTTTGCTGCTaGCTGCTGATACTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSNWLCC*LLILFQ
Trigger: CTGGAAGAGTATCAGCAGGCAGCAGCAAAGCCAGTT...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGGAACTGGCTTTGCTaGTGCCTGCTGATACTCTTC +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPGNWLC*CLLILF
Trigger: GAAGAGTATCAGCAGGCAGCAGCAAAGCCAGTTCCC...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp CCAGTGGCTAGATGTGGTAGAAGTGCAGTTATGAAAATTCTACAGGCAATCATGGGGAACTGGCTTTGCTaGTGCCTGCTGATACTCTTC +
Preference number: 4 (lower is better)
Translates to: PVARCGRSAVMKILQAIMGNWLC*CLLILF
Trigger: GAAGAGTATCAGCAGGCAGCAGCAAAGCCAGTTCCC...CATGATTGCCTGTAGAATTTTCATAACTGCACTTCTACCACATCTAGCCACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR GCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGGGGAACTGGCTTTGCTaGTGCCTGCTGATACTCTTC +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLGNWLC*CLLILF
Trigger: GAAGAGTATCAGCAGGCAGCAGCAAAGCCAGTTCCC...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp CCAGTGGCTAGATGTGGTAGAAGTGCAGTTATGAAAATTCTACAGGCAATCATGGAAGGGAACTGGCTTTaGTGCTGCCTGCTGATACTC +
Preference number: 4 (lower is better)
Translates to: PVARCGRSAVMKILQAIMEGNWL*CCLLIL
Trigger: GAGTATCAGCAGGCAGCAGCAAAGCCAGTTCCCTTC...CATGATTGCCTGTAGAATTTTCATAACTGCACTTCTACCACATCTAGCCACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR GCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCTCACTTCGTGAACGCTaGAGGCTTCCTGGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: SHKRSPAVVQISPALFHISLRER*RLPGRE
Trigger: TTCCCTTCCAGGAAGCCTGCAGCGTTCACGAAGTGA...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTTCACTTCGTGAACGCTaGAGGCTTCCTGGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVSLRER*RLPGRE
Trigger: TTCCCTTCCAGGAAGCCTGCAGCGTTCACGAAGTGA...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTTCACTTCGTGAACGCTaGAGGCTTCCTGGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPSLRER*RLPGRE
Trigger: TTCCCTTCCAGGAAGCCTGCAGCGTTCACGAAGTGA...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTCGCAGAAGTACTCCATaGTGCGGGGCTCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFRRSTP*CGAPWL
Trigger: CAGCCATGGAGCCCCGCAGCATGGAGTACTTCTGCG...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCGTCGAGGAATACGACTaGTTCGGGCCACTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: QITLQQWQTASLIAICLFVEEYD*FGPLKA
Trigger: GGCTTTCAGTGGCCCGAAGCAGTCGTATTCCTCGAC...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGGTCGAGGAATACGACTaGTTCGGGCCACTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLVEEYD*FGPLKA
Trigger: GGCTTTCAGTGGCCCGAAGCAGTCGTATTCCTCGAC...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATTCTATTGAGGACTTCTaGCACATCTTCCGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDSIEDF*HIFRLP
Trigger: AGGCAGACGGAAGATGTGGCAGAAGTCCTCAATAGA...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGAACTCTGGGTTCCATTaGCAGTGTTTCGAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDENSGFH*QCFEGD
Trigger: ATCACCTTCGAAACACTGGCAATGGAACCCAGAGTT...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGAGTAGCATCACCTCCTaGTCTTGGGTCAGACATCCC +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLSSITS*SWVRHP
Trigger: GGGATGTCTGACCCAAGAGCAGGAGGTGATGCTACT...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACAGTAGCATCACCTCCTaGTCTTGGGTCAGACATCCC +
Preference number: 4 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDSSITS*SWVRHP
Trigger: GGGATGTCTGACCCAAGAGCAGGAGGTGATGCTACT...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp ACTTTGATGCACTGCTCTGGACTAATTGAAGTGGCCAACACTGATGCCGCTTCCAGCACTTTGATGCACTaGTCTGGACTAATTGAAGTG +
Preference number: 4 (lower is better)
Translates to: TLMHCSGLIEVANTDAASSTLMH*SGLIEV
Trigger: CACTTCAATTAGTCCAGAGCAGTGCATCAAAGTGCT...GGAAGCGGCATCAGTGTTGGCCACTTCAATTAGTCCAGAGCAGTGCATCAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR GCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCCATTTCTTGAGTGCCTaGCTGCCATTAGATGCCAGG +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSHFLSA*LPLDAR
Trigger: CCTGGCATCTAATGGCAGGCAGGCACTCAAGAAATG...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000650653.1
CDS-3UTR CCA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGCTTCCTTGCACTGTTaGCAGGATTTCCGGATGTTT +
Preference number: 4 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDASLHC*QDFRMF
Trigger: AAACATCCGGAAATCCTGCCAACAGTGCAAGGAAGC...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGGCTTCTCTAACCACCTaGGATCTAAGATCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDEASLTT*DLRSLA
Trigger: AGCTAAGGATCTTAGATCCCAGGTGGTTAGAGAAGC...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTTTCTTGCCTCCACTCTaGCCTCAGCGTCAGCATCAT +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPFLPPL*PQRQHH
Trigger: ATGATGCTGACGCTGAGGCCAGAGTGGAGGCAAGAA...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp AAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTAGTTTCTTGCCTCCACTCTaGCCTCAGCGTCAGCATCAT +
Preference number: 4 (lower is better)
Translates to: KLQLMTCITITQTESSCSFLPPL*PQRQHH
Trigger: ATGATGCTGACGCTGAGGCCAGAGTGGAGGCAAGAA...ACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGTTCTTGCCTCCACTCTaGCCTCAGCGTCAGCATCAT +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLFLPPL*PQRQHH
Trigger: ATGATGCTGACGCTGAGGCCAGAGTGGAGGCAAGAA...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp AAAGAAAACAGGAAAGTTAGATACAAGCCAATTCCCTTCCCAAACCCCCTTAGAACGCTGCAGGCTTCCTaGAAGGGAACTGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: KENRKVRYKPIPFPNPLRTLQAS*KGTGFA
Trigger: AGCAAAGCCAGTTCCCTTCCAGGAAGCCTGCAGCGT...TCTAAGGGGGTTTGGGAAGGGAATTGGCTTGTATCTAACTTTCCTGTTTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR CCA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTACGCTGCAGGCTTCCTaGAAGGGAACTGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLTLQAS*KGTGFA
Trigger: AGCAAAGCCAGTTCCCTTCCAGGAAGCCTGCAGCGT...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GTGGCTAGATGTGGTAGAAGTGCAGTTATGAAAATTCTACAGGCAATCATGGATACGCTGCAGGCTTCCTaGAAGGGAACTGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: VARCGRSAVMKILQAIMDTLQAS*KGTGFA
Trigger: AGCAAAGCCAGTTCCCTTCCAGGAAGCCTGCAGCGT...ATCCATGATTGCCTGTAGAATTTTCATAACTGCACTTCTACCACATCTAGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR CCA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTCCTTCTGCTGCACCTaGGCGCAGAAGTACTCCATG +
Preference number: 4 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLSFCCT*AQKYSM
Trigger: CATGGAGTACTTCTGCGCCCAGGTGCAGCAGAAGGA...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR CCA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACTGGACAGGGCTGTTGTaGTCAGAACTCTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDWTGLL*SELFLE
Trigger: CTCCAGGAAGAGTTCTGACCACAACAGCCCTGTCCA...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp AAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTAGTTGGACAGGGCTGTTGTaGTCAGAACTCTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: KLQLMTCITITQTESSCSWTGLL*SELFLE
Trigger: CTCCAGGAAGAGTTCTGACCACAACAGCCCTGTCCA...ACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCACCAGAGCTCACAGTaGACAGGGCTGTTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFHQSSQ*TGLLWS
Trigger: TGACCACAACAGCCCTGTCCACTGTGAGCTCTGGTG...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCTCTGCTACAGCCCTaGCTCCGTGGTATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLSLLQP*LRGILL
Trigger: AAGCAAGATACCACGGAGCCAGGGCTGTAGCAGAGA...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTATCACCTCCTGCTCTTaGGTCAGACATCCCAGGACC +
Preference number: 4 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLITSCS*VRHPRT
Trigger: GGTCCTGGGATGTCTGACCCAAGAGCAGGAGGTGAT...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGATCACCTCCTGCTCTTaGGTCAGACATCCCAGGACC +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLITSCS*VRHPRT
Trigger: GGTCCTGGGATGTCTGACCCAAGAGCAGGAGGTGAT...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCATAGTCTCGAGAGCGTaGAGAGGAGTGAGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSIVSRA*RGVSRH
Trigger: ATGCCTACTCACTCCTCTCCACGCTCTCGAGACTAT...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp TTACCGCATGAACAGCCACCAGGCAGAAGACACAAGCTTTCCGAACACTGCTCTTGCAGCCAGATTAATTaGGTAGTCTGCAGTTTGAAT +
Preference number: 4 (lower is better)
Translates to: LPHEQPPGRRHKLSEHCSCSQIN*VVCSLN
Trigger: ATTCAAACTGCAGACTACCCAATTAATCTGGCTGCA...AGAGCAGTGTTCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTGTTCATGCGGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR CCA 90 bp ACTTTGATGCACTGCTCTGGACTAATTGAAGTGGCCAACACTGATGCCGCTTCCGGTTTAGGGTTTCCTTaGACACTCTCTCTATCACTT +
Preference number: 4 (lower is better)
Translates to: TLMHCSGLIEVANTDAASGLGFP*TLSLSL
Trigger: AAGTGATAGAGAGAGTGTCCAAGGAAACCCTAAACC...GGAAGCGGCATCAGTGTTGGCCACTTCAATTAGTCCAGAGCAGTGCATCAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR CCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCATCTGGAATGGTGTCTaGAGGCGAGGGGCTGAAAAG +
Preference number: 4 (lower is better)
Translates to: SHKRSPAVVQISPALFHIIWNGV*RRGAEK
Trigger: CTTTTCAGCCCCTCGCCTCCAGACACCATTCCAGAT...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCAGTGCATTGGCACGCTaGTCCCAGTCATGTTTATCA +
Preference number: 4 (lower is better)
Translates to: PKKLQLMTCITITQTESSSALAR*SQSCLS
Trigger: TGATAAACATGACTGGGATCAGCGTGCCAATGCACT...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTGTTTCCCAAAACTGTTaGAAGGTGGGCTACAGTAAT +
Preference number: 4 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELVSQNC*KVGYSN
Trigger: ATTACTGTAGCCCACCTTTCAACAGTTTTGGGAAAC...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GACAGAGTAGAGCTTTGCAGTTCTCCCAGATCTCCAAAAGGCTTCACATTCTTGATCCAGAAGTTGCCATaGCTTTTGCACTATTGGGGA +
Preference number: 4 (lower is better)
Translates to: DRVELCSSPRSPKGFTFLIQKLP*LLHYWG
Trigger: TCCCCAATAGTGCAAAAGTCATGGCAACTTCTGGAT...CAAGAATGTGAAGCCTTTTGGAGATCTGGGAGAACTGCAAAGCTCTACTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR TCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCATCCAGAAGTTGCCATaGCTTTTGCACTATTGGGGA +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRIQKLP*LLHYWG
Trigger: TCCCCAATAGTGCAAAAGTCATGGCAACTTCTGGAT...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTCTTTCCAATGAATaGGTCTGCCACTCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRCLSNE*VCHSCN
Trigger: GTTGCAAGAGTGGCAGACTCATTCATTGGAAAGACA...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp TTGGTTAGACAGAGTAGAGCTTTGCAGTTCTCCCAGATCTCCAAAAGGCTTCACTGCATGTCTTTCCAATaGATGAGTCTGCCACTCTTG +
Preference number: 4 (lower is better)
Translates to: LVRQSRALQFSQISKRLHCMSFQ*MSLPLL
Trigger: CAAGAGTGGCAGACTCATTCATTGGAAAGACATGCA...GTGAAGCCTTTTGGAGATCTGGGAGAACTGCAAAGCTCTACTCTGTCTAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR TCA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATTGCATGTCTTTCCAATaGATGAGTCTGCCACTCTTG +
Preference number: 4 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDCMSFQ*MSLPLL
Trigger: CAAGAGTGGCAGACTCATTCATTGGAAAGACATGCA...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTCTTCCAGCCACAGTTaGTGGATTTGCTGTAGACCA +
Preference number: 4 (lower is better)
Translates to: PKKLQLMTCITITQTESSSSSHS*WICCRP
Trigger: TGGTCTACAGCAAATCCATCAACTGTGGCTGGAAGA...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCTTTGCTGCTGCCTGCTaGTACTCTTCCAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: QITLQQWQTASLIAICLFFAAAC*YSSSHS
Trigger: ACTGTGGCTGGAAGAGTATCAGCAGGCAGCAGCAAA...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTATCAATGTCACTTCGTaGACGCTGCAGGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFINVTS*TLQASW
Trigger: CCAGGAAGCCTGCAGCGTTCACGAAGTGACATTGAT...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACGACTGTCCAGCAGCATaGTGTGCCTTGGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDDCPAA*CALAPA
Trigger: TGCAGGTGCCAAGGCACATCATGCTGCTGGACAGTC...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR TCA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTGACTGTCCAGCAGCATaGTGTGCCTTGGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFDCPAA*CALAPA
Trigger: TGCAGGTGCCAAGGCACATCATGCTGCTGGACAGTC...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATCTGATGACTAGTGGCTaGGCCCCAAAAATGTTTAAG +
Preference number: 4 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDLMTSG*APKMFK
Trigger: CTTAAACATTTTTGGGGCTCAGCCACTAGTCATCAG...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR TCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTCCGGCTACCAGGCTGTaGTTGAGACACCATTTTTGT +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPPATRL*LRHHFC
Trigger: ACAAAAATGGTGTCTCAATCACAGCCTGGTAGCCGG...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGCCGGCTACCAGGCTGTaGTTGAGACACCATTTTTGT +
Preference number: 4 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLPATRL*LRHHFC
Trigger: ACAAAAATGGTGTCTCAATCACAGCCTGGTAGCCGG...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTTGACCAGGACTCTTTaGACACCAGAGCTCACAGTG +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLLTRTL*TPELTV
Trigger: CACTGTGAGCTCTGGTGTTCAAAGAGTCCTGGTCAA...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTGCTGAGGCTGAATTaGCCAGGACTCTTTGAACAC +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLVLRLN*PGLFEH
Trigger: GTGTTCAAAGAGTCCTGGTCAATTCAGCCTCAGCAC...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGAGACGACAGTCGACTTaGTTGGCTGATCCCATAACC +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLRRQST*LADPIT
Trigger: GGTTATGGGATCAGCCAATCAAGTCGACTGTCGTCT...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCAGACGACAGTCGACTTaGTTGGCTGATCCCATAACC +
Preference number: 4 (lower is better)
Translates to: SHKRSPAVVQISPALFHIRRQST*LADPIT
Trigger: GGTTATGGGATCAGCCAATCAAGTCGACTGTCGTCT...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCACTATAGGAGCGTTCTaGACAAGCACTAGATGCATC +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRTIGAF*TSTRCI
Trigger: GATGCATCTAGTGCTTGTTCAGAACGCTCCTATAGT...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTGGTGTCTGGGTCTaGTCAACTGTAAATCTCATT +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDELGVWV*STVNLI
Trigger: AATGAGATTTACAGTTGATCAGACCCAGACACCAAG...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCGGACCAGTTAGCTGGTaGTCGTGGTGTTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: QITLQQWQTASLIAICLFGPVSW*SWCWSC
Trigger: ACAAGACCAACACCACGATCACCAGCTAACTGGTCC...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTGGACCAGTTAGCTGGTaGTCGTGGTGTTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLGPVSW*SWCWSC
Trigger: ACAAGACCAACACCACGATCACCAGCTAACTGGTCC...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCCTTGGCTACGGAAGCTaGAATTCTGGATTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: PKKLQLMTCITITQTESSLGYGS*NSGLLQ
Trigger: CTGAAGCAATCCAGAATTTCAGCTTCCGTAGCCAAG...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCGCAACTAGGTCAGAATaGTCTAGGGAAAGATCGTCA +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRATRSE*SRERSS
Trigger: TGACGATCTTTCCCTAGATCATTCTGACCTAGTTGC...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGTCACCAATTACCGCATaGACAGCCACCAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLSPITA*TATRQK
Trigger: CTTCTGCCTGGTGGCTGTTCATGCGGTAATTGGTGA...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATCTGAATACCTTGCCATaGGGGTCAGCAAACATTCTT +
Preference number: 4 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDLNTLP*GSANIL
Trigger: AAGAATGTTTGCTGACCCTCATGGCAAGGTATTCAG...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399362.8
ENST00000468888.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATCCCATAACCTGGACCTaGGGCCCCATACACTTCGGG +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHPITWT*GPIHFG
Trigger: CCCGAAGTGTATGGGGCCTCAGGTCCAGGTTATGGG...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp GGAAAGTTAGATACAAGCCAATTCCCTTCCCAAACCCCCTTAGAAACCAGTGGCAATCACAGATCCGTTTaGAAATCAGTCGCCTCATTC +
Preference number: 4 (lower is better)
Translates to: GKLDTSQFPSQTPLETSGNHRSV*KSVASF
Trigger: GAATGAGGCGACTGATTTGCAAACGGATCTGTGATT...GCCACTGGTTTCTAAGGGGGTTTGGGAAGGGAATTGGCTTGTATCTAACTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487200.5
CDS-3UTR GCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTCATGTATGTCTTTCTTaGCTCCACTCTGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPHVCLS*LHSGLS
Trigger: GCTGAGGCCAGAGTGGAGGCAAGAAAGACATACATG...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGCATGTATGTCTTTCTTaGCTCCACTCTGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLHVCLS*LHSGLS
Trigger: GCTGAGGCCAGAGTGGAGGCAAGAAAGACATACATG...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGCATGTATGTCTTTCTTaGCTCCACTCTGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLHVCLS*LHSGLS
Trigger: GCTGAGGCCAGAGTGGAGGCAAGAAAGACATACATG...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp CCAGTGGCTAGATGTGGTAGAAGTGCAGTTATGAAAATTCTACAGGCAATCATGCATGTATGTCTTTCTTaGCTCCACTCTGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: PVARCGRSAVMKILQAIMHVCLS*LHSGLS
Trigger: GCTGAGGCCAGAGTGGAGGCAAGAAAGACATACATG...CATGATTGCCTGTAGAATTTTCATAACTGCACTTCTACCACATCTAGCCACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR GCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTAACTGGCTTTGCTGCTaGCTGCTGATACTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPNWLCC*LLILFQ
Trigger: CTGGAAGAGTATCAGCAGGCAGCAGCAAAGCCAGTT...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGAACTGGCTTTGCTGCTaGCTGCTGATACTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLNWLCC*LLILFQ
Trigger: CTGGAAGAGTATCAGCAGGCAGCAGCAAAGCCAGTT...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGAACTGGCTTTGCTGCTaGCTGCTGATACTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLNWLCC*LLILFQ
Trigger: CTGGAAGAGTATCAGCAGGCAGCAGCAAAGCCAGTT...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTGAAGGGAACTGGCTTTaGTGCTGCCTGCTGATACTC +
Preference number: 4 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLEGNWL*CCLLIL
Trigger: GAGTATCAGCAGGCAGCAGCAAAGCCAGTTCCCTTC...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGGAAGGGAACTGGCTTTaGTGCTGCCTGCTGATACTC +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLEGNWL*CCLLIL
Trigger: GAGTATCAGCAGGCAGCAGCAAAGCCAGTTCCCTTC...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCGAAGGGAACTGGCTTTaGTGCTGCCTGCTGATACTC +
Preference number: 4 (lower is better)
Translates to: QITLQQWQTASLIAICLFEGNWL*CCLLIL
Trigger: GAGTATCAGCAGGCAGCAGCAAAGCCAGTTCCCTTC...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTTCACTTCGTGAACGCTaGAGGCTTCCTGGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFSLRER*RLPGRE
Trigger: TTCCCTTCCAGGAAGCCTGCAGCGTTCACGAAGTGA...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACTCCAGCAGCATGATGTaGCTTGGCACCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDSSSMM*LGTCSS
Trigger: GCTGCTGCAGGTGCCAAGGCACATCATGCTGCTGGA...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR GCA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTTCCAGCAGCATGATGTaGCTTGGCACCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFSSSMM*LGTCSS
Trigger: GCTGCTGCAGGTGCCAAGGCACATCATGCTGCTGGA...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp AAAGTTAGATACAAGCCAATTCCCTTCCCAAACCCCCTTAGAAACCAGTGGCTAGACAGAGTAGAGCTTTaGAGTTCTCCCAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: KVRYKPIPFPNPLRNQWLDRVEL*SSPRSP
Trigger: TGGAGATCTGGGAGAACTGCAAAGCTCTACTCTGTC...TAGCCACTGGTTTCTAAGGGGGTTTGGGAAGGGAATTGGCTTGTATCTAACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR GCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATCCGACGTCCTTCTGCTaGACCTGGGCGCAGAAGTAC +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHPTSFC*TWAQKY
Trigger: GTACTTCTGCGCCCAGGTGCAGCAGAAGGACGTCGG...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTCCTTAGAAGCACCTaGTCCAACCTTAGGGCCACC +
Preference number: 4 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLFLRST*SNLRAT
Trigger: GGTGGCCCTAAGGTTGGAGCAGGTGCTTCTAAGGAA...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359576.9
ENST00000468888.6
CDS-3UTR GCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGGCCACATCTTCCGTCTaGCTCATATATGTAGGAATA +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDEATSSV*LIYVGI
Trigger: TATTCCTACATATATGAGGCAGACGGAAGATGTGGC...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATAACTCTGGGTTCCATTaGCAGTGTTTCGAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDNSGFH*QCFEGD
Trigger: ATCACCTTCGAAACACTGGCAATGGAACCCAGAGTT...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTAGTAGCATCACCTCCTaGTCTTGGGTCAGACATCCC +
Preference number: 4 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFSSITS*SWVRHP
Trigger: GGGATGTCTGACCCAAGAGCAGGAGGTGATGCTACT...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTCATTTCTTGAGTGCCTaGCTGCCATTAGATGCCAGG +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPHFLSA*LPLDAR
Trigger: CCTGGCATCTAATGGCAGGCAGGCACTCAAGAAATG...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000650653.1
CDS-3UTR GCA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGCATTTCTTGAGTGCCTaGCTGCCATTAGATGCCAGG +
Preference number: 4 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLHFLSA*LPLDAR
Trigger: CCTGGCATCTAATGGCAGGCAGGCACTCAAGAAATG...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000650653.1
CDS-3UTR GCA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTATAAGTACAGCTCAGTaGCTGCGCCACTGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFISTAQ*LRHWAR
Trigger: CCGAGCCCAGTGGCGCAGGCACTGAGCTGTACTTAT...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp GACAGAGTAGAGCTTTGCAGTTCTCCCAGATCTCCAAAAGGCTTCACATTCTTGGCTTCTCTAACCACCTaGGATCTAAGATCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: DRVELCSSPRSPKGFTFLASLTT*DLRSLA
Trigger: AGCTAAGGATCTTAGATCCCAGGTGGTTAGAGAAGC...CAAGAATGTGAAGCCTTTTGGAGATCTGGGAGAACTGCAAAGCTCTACTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR CCA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGCTTCTCTAACCACCTaGGATCTAAGATCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDASLTT*DLRSLA
Trigger: AGCTAAGGATCTTAGATCCCAGGTGGTTAGAGAAGC...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCCTCTCACCTGACTGTTaGAGTCTCCAAACAGGATAC +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSLSPDC*SLQTGY
Trigger: GTATCCTGTTTGGAGACTCCAACAGTCAGGTGAGAG...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR CCA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTGGTCAGAACTCTTCCTaGAGACCCAGACCGGCTACC +
Preference number: 4 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFGQNSS*RPRPAT
Trigger: GGTAGCCGGTCTGGGTCTCCAGGAAGAGTTCTGACC...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTTGGACAGGGCTGTTGTaGTCAGAACTCTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFWTGLL*SELFLE
Trigger: CTCCAGGAAGAGTTCTGACCACAACAGCCCTGTCCA...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGTGGACAGGGCTGTTGTaGTCAGAACTCTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLWTGLL*SELFLE
Trigger: CTCCAGGAAGAGTTCTGACCACAACAGCCCTGTCCA...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTCTCCCCATGGAACTCTaGGTTCCATTGCCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPLPMEL*VPLPVF
Trigger: AAACACTGGCAATGGAACCCAGAGTTCCATGGGGAG...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGCTCCCCATGGAACTCTaGGTTCCATTGCCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLLPMEL*VPLPVF
Trigger: AAACACTGGCAATGGAACCCAGAGTTCCATGGGGAG...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGTCAAAGGACTCCCCATaGAACTCTGGGTTCCATTGC +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLSKDSP*NSGFHC
Trigger: GCAATGGAACCCAGAGTTCCATGGGGAGTCCTTTGA...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTTCAAAGGACTCCCCATaGAACTCTGGGTTCCATTGC +
Preference number: 4 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVSKDSP*NSGFHC
Trigger: GCAATGGAACCCAGAGTTCCATGGGGAGTCCTTTGA...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACTCAAAGGACTCCCCATaGAACTCTGGGTTCCATTGC +
Preference number: 4 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDSKDSP*NSGFHC
Trigger: GCAATGGAACCCAGAGTTCCATGGGGAGTCCTTTGA...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCAAAGGACTCCCCATaGAACTCTGGGTTCCATTGC +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLSKDSP*NSGFHC
Trigger: GCAATGGAACCCAGAGTTCCATGGGGAGTCCTTTGA...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTATAGTCTCGAGAGCGTaGAGAGGAGTGAGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVIVSRA*RGVSRH
Trigger: ATGCCTACTCACTCCTCTCCACGCTCTCGAGACTAT...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGTCTACACGCTCATTATaGTTAGACAGCTCCTTCAAC +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDESTRSL*LDSSFN
Trigger: GTTGAAGGAGCTGTCTAACCATAATGAGCGTGTAGA...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTTCTACACGCTCATTATaGTTAGACAGCTCCTTCAAC +
Preference number: 4 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELSTRSL*LDSSFN
Trigger: GTTGAAGGAGCTGTCTAACCATAATGAGCGTGTAGA...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTAACAGGCAGATGATTTaGTGCAGCTTTCTTAAGGGA +
Preference number: 4 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELNRQMI*CSFLKG
Trigger: TCCCTTAAGAAAGCTGCACCAAATCATCTGCCTGTT...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTCCCATAGCCATTAGATaGTCCAGGGAGCTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPPIAIR*SRELSE
Trigger: TTCAGAGAGCTCCCTGGACCATCTAATGGCTATGGG...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461133.8
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTATCTGGAATGGTGTCTaGAGGCGAGGGGCTGAAAAG +
Preference number: 4 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFIWNGV*RRGAEK
Trigger: CTTTTCAGCCCCTCGCCTCCAGACACCATTCCAGAT...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTCGCCTCATTCCTCTaGAAGCTCTTAATTTCCCTC +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLVASFL*KLLISL
Trigger: GAGGGAAATTAAGAGCTTTCAGAGGAATGAGGCGAC...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635664.1
CDS-3UTR TCA 90 bp TTGGTTAGACAGAGTAGAGCTTTGCAGTTCTCCCAGATCTCCAAAAGGCTTCACCCTATTTCCATCCACTaGTTCTTCATCATCGAAGCT +
Preference number: 4 (lower is better)
Translates to: LVRQSRALQFSQISKRLHPISIH*FFIIEA
Trigger: AGCTTCGATGATGAAGAATCAGTGGATGGAAATAGG...GTGAAGCCTTTTGGAGATCTGGGAGAACTGCAAAGCTCTACTCTGTCTAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR TCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGAGTGCATTGGCACGCTaGTCCCAGTCATGTTTATCA +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLSALAR*SQSCLS
Trigger: TGATAAACATGACTGGGATCAGCGTGCCAATGCACT...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCAGTGCATTGGCACGCTaGTCCCAGTCATGTTTATCA +
Preference number: 4 (lower is better)
Translates to: SHKRSPAVVQISPALFHISALAR*SQSCLS
Trigger: TGATAAACATGACTGGGATCAGCGTGCCAATGCACT...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACAGTGCATTGGCACGCTaGTCCCAGTCATGTTTATCA +
Preference number: 4 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDSALAR*SQSCLS
Trigger: TGATAAACATGACTGGGATCAGCGTGCCAATGCACT...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTTCTAAGATCCTTAGCTaGAAGTTTAAGTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELSKILS*KFKCSI
Trigger: GATGGAGCACTTAAACTTTCAGCTAAGGATCTTAGA...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCTCTTCCAGCCACAGTTaGTGGATTTGCTGTAGACCA +
Preference number: 4 (lower is better)
Translates to: SHKRSPAVVQISPALFHISSSHS*WICCRP
Trigger: TGGTCTACAGCAAATCCATCAACTGTGGCTGGAAGA...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTTCTTCCAGCCACAGTTaGTGGATTTGCTGTAGACCA +
Preference number: 4 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVSSSHS*WICCRP
Trigger: TGGTCTACAGCAAATCCATCAACTGTGGCTGGAAGA...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTGACTGTCCAGCAGCATaGTGTGCCTTGGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFDCPAA*CALAPA
Trigger: TGCAGGTGCCAAGGCACATCATGCTGCTGGACAGTC...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATGACTGTCCAGCAGCATaGTGTGCCTTGGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHDCPAA*CALAPA
Trigger: TGCAGGTGCCAAGGCACATCATGCTGCTGGACAGTC...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCCTGATGACTAGTGGCTaGGCCCCAAAAATGTTTAAG +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSLMTSG*APKMFK
Trigger: CTTAAACATTTTTGGGGCTCAGCCACTAGTCATCAG...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR TCA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTCAAAATCATACCGCCTaGACTTTGCACTTCATCAAA +
Preference number: 4 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELQNHTA*TLHFIK
Trigger: TTTGATGAAGTGCAAAGTTCAGGCGGTATGATTTTG...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR TCA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCTTGACCAGGACTCTTTaGACACCAGAGCTCACAGTG +
Preference number: 4 (lower is better)
Translates to: QITLQQWQTASLIAICLFLTRTL*TPELTV
Trigger: CACTGTGAGCTCTGGTGTTCAAAGAGTCCTGGTCAA...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGGTGCTGAGGCTGAATTaGCCAGGACTCTTTGAACAC +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLVLRLN*PGLFEH
Trigger: GTGTTCAAAGAGTCCTGGTCAATTCAGCCTCAGCAC...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCCTGGACCGAGGGGCTaGAAAGAGCGAACAGGACTT +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFPGPRG*KERTGL
Trigger: AAGTCCTGTTCGCTCTTTTCAGCCCCTCGGTCCAGG...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000635664.1
CDS-3UTR TCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATCCTGGACCGAGGGGCTaGAAAGAGCGAACAGGACTT +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHPGPRG*KERTGL
Trigger: AAGTCCTGTTCGCTCTTTTCAGCCCCTCGGTCCAGG...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000635664.1
CDS-3UTR TCA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCAGACGACAGTCGACTTaGTTGGCTGATCCCATAACC +
Preference number: 4 (lower is better)
Translates to: QITLQQWQTASLIAICLFRRQST*LADPIT
Trigger: GGTTATGGGATCAGCCAATCAAGTCGACTGTCGTCT...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTAGACGACAGTCGACTTaGTTGGCTGATCCCATAACC +
Preference number: 4 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLRRQST*LADPIT
Trigger: GGTTATGGGATCAGCCAATCAAGTCGACTGTCGTCT...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGCTTGGCTACGGAAGCTaGAATTCTGGATTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLLGYGS*NSGLLQ
Trigger: CTGAAGCAATCCAGAATTTCAGCTTCCGTAGCCAAG...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTAGTCTTGGCTACGGAAGCTaGAATTCTGGATTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: KLQLMTCITITQTESSCSLGYGS*NSGLLQ
Trigger: CTGAAGCAATCCAGAATTTCAGCTTCCGTAGCCAAG...ACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCCTTGGCTACGGAAGCTaGAATTCTGGATTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: SHKRSPAVVQISPALFHILGYGS*NSGLLQ
Trigger: CTGAAGCAATCCAGAATTTCAGCTTCCGTAGCCAAG...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGAAGAGCTGTTTGACTTaGGTCAGTAGCATCACCTCC +
Preference number: 4 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLKSCLT*VSSITS
Trigger: GGAGGTGATGCTACTGACTCAAGTCAAACAGCTCTT...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCAAGAGCTGTTTGACTTaGGTCAGTAGCATCACCTCC +
Preference number: 4 (lower is better)
Translates to: SHKRSPAVVQISPALFHIKSCLT*VSSITS
Trigger: GGAGGTGATGCTACTGACTCAAGTCAAACAGCTCTT...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTAAGAGCTGTTTGACTTaGGTCAGTAGCATCACCTCC +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPKSCLT*VSSITS
Trigger: GGAGGTGATGCTACTGACTCAAGTCAAACAGCTCTT...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGTTATCAAGAGCTGTTTaGCTTGAGTCAGTAGCATCA +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDELSRAV*LESVAS
Trigger: TGATGCTACTGACTCAAGTCAAACAGCTCTTGATAA...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp ACCAATTACCGCATGAACAGCCACCAGGCAGAAGACACAAGCTTTCCGAACACTTTAAATCTTGCTGGTTaGTGCCTTAGGATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: TNYRMNSHQAEDTSFPNTLNLAG*CLRISL
Trigger: AAGAGAAATCCTAAGGCATCAACCAGCAAGATTTAA...AGTGTTCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTGTTCATGCGGTAATTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR TCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGCTCACCACCTCCTTATaGGGATCTTTATGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLLTTSL*GSLCAS
Trigger: GGAAGCACATAAAGATCCTCATAAGGAGGTGGTGAG...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCCTCACCACCTCCTTATaGGGATCTTTATGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: SHKRSPAVVQISPALFHILTTSL*GSLCAS
Trigger: GGAAGCACATAAAGATCCTCATAAGGAGGTGGTGAG...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp CACCTAATGCTATTGCTCAGTTGCTTTCTCTTAGAAATACAGTCCTTACAGAACTCACCAATTACCGCATaGACAGCCACCAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: HLMLLLSCFLLEIQSLQNSPITA*TATRQK
Trigger: CTTCTGCCTGGTGGCTGTTCATGCGGTAATTGGTGA...GTTCTGTAAGGACTGTATTTCTAAGAGAAAGCAACTGAGCAATAGCATTAGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR TCA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTTTACTGCCAGTAAGTTaGCTGAGATGTGGTTTTAGT +
Preference number: 4 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELLLPVS*LRCGFS
Trigger: ACTAAAACCACATCTCAGTCAACTTACTGGCAGTAA...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCATCTGTCCTTTCTTTTaGGAGACCTGGTTCGCTGTG +
Preference number: 4 (lower is better)
Translates to: SHKRSPAVVQISPALFHIICPFF*ETWFAV
Trigger: CACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGAT...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGATCTGTCCTTTCTTTTaGGAGACCTGGTTCGCTGTG +
Preference number: 4 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLICPFF*ETWFAV
Trigger: CACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGAT...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp AAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTAGTATCTGTCCTTTCTTTTaGGAGACCTGGTTCGCTGTG +
Preference number: 4 (lower is better)
Translates to: KLQLMTCITITQTESSCSICPFF*ETWFAV
Trigger: CACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGAT...ACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACATCTGTCCTTTCTTTTaGGAGACCTGGTTCGCTGTG +
Preference number: 4 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDICPFF*ETWFAV
Trigger: CACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGAT...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGAAAGGGGAAAGCCTATaGCAAATCATCCATTCAGTA +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDEKGESL*QIIHSV
Trigger: TACTGAATGGATGATTTGTCATAGGCTTTCCCCTTT...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGGTAGCTACACCTaGAAAATCTTTTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRCGSYT*KIFSPQ
Trigger: CTGAGGAGAAAAGATTTTTCAGGTGTAGCTACCACA...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000650653.1
CDS-3UTR TCA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTCTCCAAAAACATGCTaGATACCTTGCCATGAGGGT +
Preference number: 4 (lower is better)
Translates to: PKKLQLMTCITITQTESSSPKTC*IPCHEG
Trigger: ACCCTCATGGCAAGGTATTCAGCATGTTTTTGGAGA...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399362.8
ENST00000468888.6
ENST00000650653.1
CDS-3UTR GCA 90 bp GGAAAGTTAGATACAAGCCAATTCCCTTCCCAAACCCCCTTAGAAACCAGTGGCGATAAATCTGATTGCTaGACATCCAGAAGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: GKLDTSQFPSQTPLETSGDKSDC*TSRSCH
Trigger: ATGGCAACTTCTGGATGTGCAGCAATCAGATTTATC...GCCACTGGTTTCTAAGGGGGTTTGGGAAGGGAATTGGCTTGTATCTAACTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR GCA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCCATGTATGTCTTTCTTaGCTCCACTCTGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: QITLQQWQTASLIAICLFHVCLS*LHSGLS
Trigger: GCTGAGGCCAGAGTGGAGGCAAGAAAGACATACATG...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGCATGTATGTCTTTCTTaGCTCCACTCTGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLHVCLS*LHSGLS
Trigger: GCTGAGGCCAGAGTGGAGGCAAGAAAGACATACATG...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GCTAGATGTGGTAGAAGTGCAGTTATGAAAATTCTACAGGCAATCATGGATTCAGGGAACTGGCTTTGCTaGTGCCTGCTGATACTCTTC +
Preference number: 4 (lower is better)
Translates to: ARCGRSAVMKILQAIMDSGNWLC*CLLILF
Trigger: GAAGAGTATCAGCAGGCAGCAGCAAAGCCAGTTCCC...TGAATCCATGATTGCCTGTAGAATTTTCATAACTGCACTTCTACCACATCTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR GCA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTATGTGCCTTGGCACCTaGAGCAGCATTCACATCAAT +
Preference number: 4 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVMCLGT*SSIHIN
Trigger: ATTGATGTGAATGCTGCTGCAGGTGCCAAGGCACAT...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGATGTGCCTTGGCACCTaGAGCAGCATTCACATCAAT +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLMCLGT*SSIHIN
Trigger: ATTGATGTGAATGCTGCTGCAGGTGCCAAGGCACAT...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCATGTGCCTTGGCACCTaGAGCAGCATTCACATCAAT +
Preference number: 4 (lower is better)
Translates to: SHKRSPAVVQISPALFHIMCLGT*SSIHIN
Trigger: ATTGATGTGAATGCTGCTGCAGGTGCCAAGGCACAT...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTCCAGCAGCATGATGTaGCTTGGCACCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHSSSMM*LGTCSS
Trigger: GCTGCTGCAGGTGCCAAGGCACATCATGCTGCTGGA...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGATACCGCCTGAACTTTaGACTTCATCAAATTTGGCA +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDEIPPEL*TSSNLA
Trigger: TGCCAAATTTGATGAAGTGCAAAGTTCAGGCGGTAT...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTCTATTGAGGACTTCTaGCACATCTTCCGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLSIEDF*HIFRLP
Trigger: AGGCAGACGGAAGATGTGGCAGAAGTCCTCAATAGA...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTTCTATTGAGGACTTCTaGCACATCTTCCGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPSIEDF*HIFRLP
Trigger: AGGCAGACGGAAGATGTGGCAGAAGTCCTCAATAGA...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCAACTCTGGGTTCCATTaGCAGTGTTTCGAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSNSGFH*QCFEGD
Trigger: ATCACCTTCGAAACACTGGCAATGGAACCCAGAGTT...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCAGCACTTTGATGCACTaGTCTGGACTAATTGAAGTG +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRSTLMH*SGLIEV
Trigger: CACTTCAATTAGTCCAGAGCAGTGCATCAAAGTGCT...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp ACTTTGATGCACTGCTCTGGACTAATTGAAGTGGCCAACACTGATGCCGCTTCCTCCAGAACCTGTTTGTaGACGTTTGATGTAAAGATT +
Preference number: 4 (lower is better)
Translates to: TLMHCSGLIEVANTDAASSRTCL*TFDVKI
Trigger: AATCTTTACATCAAACGTGCACAAACAGGTTCTGGA...GGAAGCGGCATCAGTGTTGGCCACTTCAATTAGTCCAGAGCAGTGCATCAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR GCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCAGGCAGATGATTTGGTaGAGCTTTCTTAAGGGATCA +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRRQMIW*SFLKGS
Trigger: TGATCCCTTAAGAAAGCTGCACCAAATCATCTGCCT...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTGCAACAATGGCAAACTaGTTCCCTAATAGCTATTTG +
Preference number: 4 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELATMAN*FPNSYL
Trigger: CAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGC...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCATTTCTTGAGTGCCTaGCTGCCATTAGATGCCAGG +
Preference number: 4 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFHFLSA*LPLDAR
Trigger: CCTGGCATCTAATGGCAGGCAGGCACTCAAGAAATG...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000650653.1
CDS-3UTR CCA 90 bp TTTAGGGTTTGGTTAGACAGAGTAGAGCTTTGCAGTTCTCCCAGATCTCCAAAAGCTTCCTTGCACTGTTaGCAGGATTTCCGGATGTTT +
Preference number: 4 (lower is better)
Translates to: FRVWLDRVELCSSPRSPKASLHC*QDFRMF
Trigger: AAACATCCGGAAATCCTGCCAACAGTGCAAGGAAGC...TTTTGGAGATCTGGGAGAACTGCAAAGCTCTACTCTGTCTAACCAAACCCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR CCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCGCTTCTCTAACCACCTaGGATCTAAGATCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSASLTT*DLRSLA
Trigger: AGCTAAGGATCTTAGATCCCAGGTGGTTAGAGAAGC...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp CCAATTCCCTTCCCAAACCCCCTTAGAAACCAGTGGCTAGATGTGGTAGAAGTGAAAACTGTTGAAAGGTaGGCTACAGTAATACAAGCT +
Preference number: 4 (lower is better)
Translates to: PIPFPNPLRNQWLDVVEVKTVER*ATVIQA
Trigger: AGCTTGTATTACTGTAGCCCACCTTTCAACAGTTTT...CACTTCTACCACATCTAGCCACTGGTTTCTAAGGGGGTTTGGGAAGGGAATTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR CCA 90 bp CCAGTGGCTAGATGTGGTAGAAGTGCAGTTATGAAAATTCTACAGGCAATCATGGACTTTCCTGTGAGCTaGATGAGGACCTGTCTGATT +
Preference number: 4 (lower is better)
Translates to: PVARCGRSAVMKILQAIMDFPVS*MRTCLI
Trigger: AATCAGACAGGTCCTCATCCAGCTCACAGGAAAGTC...CATGATTGCCTGTAGAATTTTCATAACTGCACTTCTACCACATCTAGCCACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR CCA 90 bp AAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTAGTGACTTTCCTGTGAGCTaGATGAGGACCTGTCTGATT +
Preference number: 4 (lower is better)
Translates to: KLQLMTCITITQTESSCSDFPVS*MRTCLI
Trigger: AATCAGACAGGTCCTCATCCAGCTCACAGGAAAGTC...ACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGGACTTTCCTGTGAGCTaGATGAGGACCTGTCTGATT +
Preference number: 4 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLDFPVS*MRTCLI
Trigger: AATCAGACAGGTCCTCATCCAGCTCACAGGAAAGTC...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACACGCTGCAGGCTTCCTaGAAGGGAACTGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDTLQAS*KGTGFA
Trigger: AGCAAAGCCAGTTCCCTTCCAGGAAGCCTGCAGCGT...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR CCA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTACGCTGCAGGCTTCCTaGAAGGGAACTGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFTLQAS*KGTGFA
Trigger: AGCAAAGCCAGTTCCCTTCCAGGAAGCCTGCAGCGT...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp TTTAGGGTTTGGTTAGACAGAGTAGAGCTTTGCAGTTCTCCCAGATCTCCAAAACCCCTTAGAAACCAGTaGCTAGATGTGGTAGAAGTG +
Preference number: 4 (lower is better)
Translates to: FRVWLDRVELCSSPRSPKPLRNQ*LDVVEV
Trigger: CACTTCTACCACATCTAGCCACTGGTTTCTAAGGGG...TTTTGGAGATCTGGGAGAACTGCAAAGCTCTACTCTGTCTAACCAAACCCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR CCA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTCACCAGAGCTCACAGTaGACAGGGCTGTTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFHQSSQ*TGLLWS
Trigger: TGACCACAACAGCCCTGTCCACTGTGAGCTCTGGTG...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTTCCTTGACTCACACTTaGTCGAGGAATACGACTGCT +
Preference number: 4 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVSLTHT*SRNTTA
Trigger: AGCAGTCGTATTCCTCGACCAAGTGTGAGTCAAGGA...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTTCCTTGACTCACACTTaGTCGAGGAATACGACTGCT +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPSLTHT*SRNTTA
Trigger: AGCAGTCGTATTCCTCGACCAAGTGTGAGTCAAGGA...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTCCTTGACTCACACTTaGTCGAGGAATACGACTGCT +
Preference number: 4 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLSLTHT*SRNTTA
Trigger: AGCAGTCGTATTCCTCGACCAAGTGTGAGTCAAGGA...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCCTCCCCATGGAACTCTaGGTTCCATTGCCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: QITLQQWQTASLIAICLFLPMEL*VPLPVF
Trigger: AAACACTGGCAATGGAACCCAGAGTTCCATGGGGAG...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTCCCCATGGAACTCTaGGTTCCATTGCCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFLPMEL*VPLPVF
Trigger: AAACACTGGCAATGGAACCCAGAGTTCCATGGGGAG...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTCTCCCCATGGAACTCTaGGTTCCATTGCCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLLPMEL*VPLPVF
Trigger: AAACACTGGCAATGGAACCCAGAGTTCCATGGGGAG...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGCTCCCCATGGAACTCTaGGTTCCATTGCCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLLPMEL*VPLPVF
Trigger: AAACACTGGCAATGGAACCCAGAGTTCCATGGGGAG...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCCGGAAGCTGAAATTCTaGATTGCTTCAGTGACACCT +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSRKLKF*IASVTP
Trigger: AGGTGTCACTGAAGCAATCCAGAATTTCAGCTTCCG...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTATCACCTCCTGCTCTTaGGTCAGACATCCCAGGACC +
Preference number: 4 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFITSCS*VRHPRT
Trigger: GGTCCTGGGATGTCTGACCCAAGAGCAGGAGGTGAT...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTATAGTCTCGAGAGCGTaGAGAGGAGTGAGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLIVSRA*RGVSRH
Trigger: ATGCCTACTCACTCCTCTCCACGCTCTCGAGACTAT...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGATAGTCTCGAGAGCGTaGAGAGGAGTGAGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLIVSRA*RGVSRH
Trigger: ATGCCTACTCACTCCTCTCCACGCTCTCGAGACTAT...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp AACATCAGTAGTGGGATCAGCTCCTCCAGAACCTGTTTGTGCACGTTTGATGTAAGATCGTCAGGAAACTaGTCAGCATCATCATCAAAC +
Preference number: 4 (lower is better)
Translates to: NISSGISSSRTCLCTFDVRSSGN*SASSSN
Trigger: GTTTGATGATGATGCTGACCAGTTTCCTGACGATCT...TACATCAAACGTGCACAAACAGGTTCTGGAGGAGCTGATCCCACTACTGATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR CCA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATTCTACACGCTCATTATaGTTAGACAGCTCCTTCAAC +
Preference number: 4 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDSTRSL*LDSSFN
Trigger: GTTGAAGGAGCTGTCTAACCATAATGAGCGTGTAGA...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGTGCAGCCAGATTAATTaGGTAGTCTGCAGTTTGAAT +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDECSQIN*VVCSLN
Trigger: ATTCAAACTGCAGACTACCCAATTAATCTGGCTGCA...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATAACAGGCAGATGATTTaGTGCAGCTTTCTTAAGGGA +
Preference number: 4 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDNRQMI*CSFLKG
Trigger: TCCCTTAAGAAAGCTGCACCAAATCATCTGCCTGTT...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATCCAGTTGATCTGGAATaGTGTCTGGAGGCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHPVDLE*CLEARG
Trigger: GCCCCTCGCCTCCAGACACCATTCCAGATCAACTGG...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTGGGCACCAGTTGATCTaGAATGGTGTCTGGAGGCGA +
Preference number: 4 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFGHQLI*NGVWRR
Trigger: TCGCCTCCAGACACCATTCCAGATCAACTGGTGCCC...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp AAAGAAAACAGGAAAGTTAGATACAAGCCAATTCCCTTCCCAAACCCCCTTAGAGTCGCCTCATTCCTCTaGAAGCTCTTAATTTCCCTC +
Preference number: 4 (lower is better)
Translates to: KENRKVRYKPIPFPNPLRVASFL*KLLISL
Trigger: GAGGGAAATTAAGAGCTTTCAGAGGAATGAGGCGAC...TCTAAGGGGGTTTGGGAAGGGAATTGGCTTGTATCTAACTTTCCTGTTTTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487200.5
CDS-3UTR TCA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTAGTGCATTGGCACGCTaGTCCCAGTCATGTTTATCA +
Preference number: 4 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFSALAR*SQSCLS
Trigger: TGATAAACATGACTGGGATCAGCGTGCCAATGCACT...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTCTAAGATCCTTAGCTaGAAGTTTAAGTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRSKILS*KFKCSI
Trigger: GATGGAGCACTTAAACTTTCAGCTAAGGATCTTAGA...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCATCCAGAAGTTGCCATaGCTTTTGCACTATTGGGGA +
Preference number: 4 (lower is better)
Translates to: SHKRSPAVVQISPALFHIIQKLP*LLHYWG
Trigger: TCCCCAATAGTGCAAAAGTCATGGCAACTTCTGGAT...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp AAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTAGTATCCAGAAGTTGCCATaGCTTTTGCACTATTGGGGA +
Preference number: 4 (lower is better)
Translates to: KLQLMTCITITQTESSCSIQKLP*LLHYWG
Trigger: TCCCCAATAGTGCAAAAGTCATGGCAACTTCTGGAT...ACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGATAAGTCTGGGTACATaGGTATGCCGAATGATAAAT +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDEISLGT*VCRMIN
Trigger: ATTTATCATTCGGCATACTCATGTACCCAGACTTAT...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTGTCTTTCCAATGAATaGGTCTGCCACTCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLCLSNE*VCHSCN
Trigger: GTTGCAAGAGTGGCAGACTCATTCATTGGAAAGACA...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTGTCTTTCCAATGAATaGGTCTGCCACTCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLCLSNE*VCHSCN
Trigger: GTTGCAAGAGTGGCAGACTCATTCATTGGAAAGACA...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp TTTAGGGTTTGGTTAGACAGAGTAGAGCTTTGCAGTTCTCCCAGATCTCCAAAATGTCTTTCCAATGAATaGGTCTGCCACTCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: FRVWLDRVELCSSPRSPKCLSNE*VCHSCN
Trigger: GTTGCAAGAGTGGCAGACTCATTCATTGGAAAGACA...TTTTGGAGATCTGGGAGAACTGCAAAGCTCTACTCTGTCTAACCAAACCCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR TCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTTGCATGTCTTTCCAATaGATGAGTCTGCCACTCTTG +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPCMSFQ*MSLPLL
Trigger: CAAGAGTGGCAGACTCATTCATTGGAAAGACATGCA...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTTGCATGTCTTTCCAATaGATGAGTCTGCCACTCTTG +
Preference number: 4 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVCMSFQ*MSLPLL
Trigger: CAAGAGTGGCAGACTCATTCATTGGAAAGACATGCA...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GGAAAGTTAGATACAAGCCAATTCCCTTCCCAAACCCCCTTAGAAACCAGTGGCTCAGCGTCAGCATCATaGATTCCCTTTTTAATAGTT +
Preference number: 4 (lower is better)
Translates to: GKLDTSQFPSQTPLETSGSASAS*IPFLIV
Trigger: AACTATTAAAAAGGGAATTCATGATGCTGACGCTGA...GCCACTGGTTTCTAAGGGGGTTTGGGAAGGGAATTGGCTTGTATCTAACTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR TCA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTTCTTCCAGCCACAGTTaGTGGATTTGCTGTAGACCA +
Preference number: 4 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFSSSHS*WICCRP
Trigger: TGGTCTACAGCAAATCCATCAACTGTGGCTGGAAGA...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACTTTGCTGCTGCCTGCTaGTACTCTTCCAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDFAAAC*YSSSHS
Trigger: ACTGTGGCTGGAAGAGTATCAGCAGGCAGCAGCAAA...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR TCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACATCAATGTCACTTCGTaGACGCTGCAGGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDINVTS*TLQASW
Trigger: CCAGGAAGCCTGCAGCGTTCACGAAGTGACATTGAT...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR TCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTCAATATCAGAGTCTaGGCTTCATCTCGAACCTTG +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSFNIRV*ASSRTL
Trigger: CAAGGTTCGAGATGAAGCTCAGACTCTGATATTGAA...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR TCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTCTACCAGGCTGTGATTaGGACACCATTTTTGTTCGA +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPLPGCD*DTIFVR
Trigger: TCGAACAAAAATGGTGTCTCAATCACAGCCTGGTAG...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTGTCGACTTGATTGGCTaGTCCCATAACCTGGACCGA +
Preference number: 4 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFVDLIG*SHNLDR
Trigger: TCGGTCCAGGTTATGGGATCAGCCAATCAAGTCGAC...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR TCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCACTATAGGAGCGTTCTaGACAAGCACTAGATGCATC +
Preference number: 4 (lower is better)
Translates to: SHKRSPAVVQISPALFHITIGAF*TSTRCI
Trigger: GATGCATCTAGTGCTTGTTCAGAACGCTCCTATAGT...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTACTATAGGAGCGTTCTaGACAAGCACTAGATGCATC +
Preference number: 4 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVTIGAF*TSTRCI
Trigger: GATGCATCTAGTGCTTGTTCAGAACGCTCCTATAGT...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTGGACCAGTTAGCTGGTaGTCGTGGTGTTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFGPVSW*SWCWSC
Trigger: ACAAGACCAACACCACGATCACCAGCTAACTGGTCC...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGCTTGGCTACGGAAGCTaGAATTCTGGATTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLLGYGS*NSGLLQ
Trigger: CTGAAGCAATCCAGAATTTCAGCTTCCGTAGCCAAG...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTAAGAGCTGTTTGACTTaGGTCAGTAGCATCACCTCC +
Preference number: 4 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFKSCLT*VSSITS
Trigger: GGAGGTGATGCTACTGACTCAAGTCAAACAGCTCTT...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATTTATCAAGAGCTGTTTaGCTTGAGTCAGTAGCATCA +
Preference number: 4 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDLSRAV*LESVAS
Trigger: TGATGCTACTGACTCAAGTCAAACAGCTCTTGATAA...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCGCAACTAGGTCAGAATaGTCTAGGGAAAGATCGTCA +
Preference number: 4 (lower is better)
Translates to: SHKRSPAVVQISPALFHIATRSE*SRERSS
Trigger: TGACGATCTTTCCCTAGATCATTCTGACCTAGTTGC...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGGCAACTAGGTCAGAATaGTCTAGGGAAAGATCGTCA +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLATRSE*SRERSS
Trigger: TGACGATCTTTCCCTAGATCATTCTGACCTAGTTGC...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACGCAACTAGGTCAGAATaGTCTAGGGAAAGATCGTCA +
Preference number: 4 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDATRSE*SRERSS
Trigger: TGACGATCTTTCCCTAGATCATTCTGACCTAGTTGC...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGTTAAATCTTGCTGGTTaGTGCCTTAGGATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDELNLAG*CLRISL
Trigger: AAGAGAAATCCTAAGGCATCAACCAGCAAGATTTAA...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTCTCACCACCTCCTTATaGGGATCTTTATGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLLTTSL*GSLCAS
Trigger: GGAAGCACATAAAGATCCTCATAAGGAGGTGGTGAG...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTCACCACCTCCTTATaGGGATCTTTATGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFLTTSL*GSLCAS
Trigger: GGAAGCACATAAAGATCCTCATAAGGAGGTGGTGAG...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATTTACTGCCAGTAAGTTaGCTGAGATGTGGTTTTAGT +
Preference number: 4 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDLLPVS*LRCGFS
Trigger: ACTAAAACCACATCTCAGTCAACTTACTGGCAGTAA...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCATCTGTCCTTTCTTTTaGGAGACCTGGTTCGCTGTG +
Preference number: 4 (lower is better)
Translates to: QITLQQWQTASLIAICLFICPFF*ETWFAV
Trigger: CACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGAT...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGATCTGTCCTTTCTTTTaGGAGACCTGGTTCGCTGTG +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLICPFF*ETWFAV
Trigger: CACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGAT...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGTTTTACAGAACTGGCTaGTTCTGTAACATCTGTCTT +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDEFYRTG*FCNICL
Trigger: AAGACAGATGTTACAGAATCAGCCAGTTCTGTAAAA...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTTTTTACAGAACTGGCTaGTTCTGTAACATCTGTCTT +
Preference number: 4 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELFYRTG*FCNICL
Trigger: AAGACAGATGTTACAGAATCAGCCAGTTCTGTAAAA...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCCATTTTTAAGTAGCTaGCATCTCAGTATGTTTCTG +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDEPFLSS*HLSMFL
Trigger: CAGAAACATACTGAGATGTCAGCTACTTAAAAATGG...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000650653.1
CDS-3UTR TCA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCTGAATACCTTGCCATaGGGGTCAGCAAACATTCTT +
Preference number: 4 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVLNTLP*GSANIL
Trigger: AAGAATGTTTGCTGACCCTCATGGCAAGGTATTCAG...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399362.8
ENST00000468888.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACTCTCCAAAAACATGCTaGATACCTTGCCATGAGGGT +
Preference number: 4 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDSPKTC*IPCHEG
Trigger: ACCCTCATGGCAAGGTATTCAGCATGTTTTTGGAGA...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399362.8
ENST00000468888.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGCCGAACACTGCTCTCTaGATTATCATAACCCTCCTT +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLPNTAL*IIITLL
Trigger: AAGGAGGGTTATGATAATTCAGAGAGCAGTGTTCGG...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487553.5
CDS-3UTR TCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCGATGAACGCTGTGATTaGGACACCATTTTTGTTCGA +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSDERCD*DTIFVR
Trigger: TCGAACAAAAATGGTGTCTCAATCACAGCGTTCATC...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635664.1
CDS-3UTR GCA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATTGCACATCCAGAAGTTaGCATGACTTTTGCACTATT +
Preference number: 4 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDCTSRS*HDFCTI
Trigger: AATAGTGCAAAAGTCATGGCAACTTCTGGATGTGCA...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp TTGGTTAGACAGAGTAGAGCTTTGCAGTTCTCCCAGATCTCCAAAAGGCTTCACTGCACATCCAGAAGTTaGCATGACTTTTGCACTATT +
Preference number: 4 (lower is better)
Translates to: LVRQSRALQFSQISKRLHCTSRS*HDFCTI
Trigger: AATAGTGCAAAAGTCATGGCAACTTCTGGATGTGCA...GTGAAGCCTTTTGGAGATCTGGGAGAACTGCAAAGCTCTACTCTGTCTAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR GCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCGATAAATCTGATTGCTaGACATCCAGAAGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRDKSDC*TSRSCH
Trigger: ATGGCAACTTCTGGATGTGCAGCAATCAGATTTATC...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGATAAATCTGATTGCTaGACATCCAGAAGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDDKSDC*TSRSCH
Trigger: ATGGCAACTTCTGGATGTGCAGCAATCAGATTTATC...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGAATGATAAATCTGATTaGTGCACATCCAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDENDKSD*CTSRSC
Trigger: GCAACTTCTGGATGTGCAGCAATCAGATTTATCATT...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTAATGATAAATCTGATTaGTGCACATCCAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELNDKSD*CTSRSC
Trigger: GCAACTTCTGGATGTGCAGCAATCAGATTTATCATT...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACGGGAACTGGCTTTGCTaGTGCCTGCTGATACTCTTC +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDGNWLC*CLLILF
Trigger: GAAGAGTATCAGCAGGCAGCAGCAAAGCCAGTTCCC...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR GCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACGAAGGGAACTGGCTTTaGTGCTGCCTGCTGATACTC +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDEGNWL*CCLLIL
Trigger: GAGTATCAGCAGGCAGCAGCAAAGCCAGTTCCCTTC...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR GCA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTGAAGGGAACTGGCTTTaGTGCTGCCTGCTGATACTC +
Preference number: 4 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFEGNWL*CCLLIL
Trigger: GAGTATCAGCAGGCAGCAGCAAAGCCAGTTCCCTTC...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACTCACTTCGTGAACGCTaGAGGCTTCCTGGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDSLRER*RLPGRE
Trigger: TTCCCTTCCAGGAAGCCTGCAGCGTTCACGAAGTGA...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR GCA 90 bp AATTGTTTCTTTGATCAAGACGATGATGAGAACAAGGGAAAAGGAGAAACAAGGTCACTTCGTGAACGCTaGAGGCTTCCTGGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: NCFFDQDDDENKGKGETRSLRER*RLPGRE
Trigger: TTCCCTTCCAGGAAGCCTGCAGCGTTCACGAAGTGA...CCTTGTTTCTCCTTTTCCCTTGTTCTCATCATCGTCTTGATCAAAGAAACAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR GCA 90 bp AAAGAAAACAGGAAAGTTAGATACAAGCCAATTCCCTTCCCAAACCCCCTTAGAATGTGCCTTGGCACCTaGAGCAGCATTCACATCAAT +
Preference number: 4 (lower is better)
Translates to: KENRKVRYKPIPFPNPLRMCLGT*SSIHIN
Trigger: ATTGATGTGAATGCTGCTGCAGGTGCCAAGGCACAT...TCTAAGGGGGTTTGGGAAGGGAATTGGCTTGTATCTAACTTTCCTGTTTTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR GCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGATGTGCCTTGGCACCTaGAGCAGCATTCACATCAAT +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLMCLGT*SSIHIN
Trigger: ATTGATGTGAATGCTGCTGCAGGTGCCAAGGCACAT...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp AAAGAAAACAGGAAAGTTAGATACAAGCCAATTCCCTTCCCAAACCCCCTTAGATCTTCTAGCACGCCCTaGCTTATTCCTTATACCCAG +
Preference number: 4 (lower is better)
Translates to: KENRKVRYKPIPFPNPLRSSSTP*LIPYTQ
Trigger: CTGGGTATAAGGAATAAGGCAGGGCGTGCTAGAAGA...TCTAAGGGGGTTTGGGAAGGGAATTGGCTTGTATCTAACTTTCCTGTTTTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333778.10
CDS-3UTR GCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCCACTATAGCCAATATTaGAGCATCTCTCACCTGACT +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSHYSQY*SISHLT
Trigger: AGTCAGGTGAGAGATGCTGCAATATTGGCTATAGTG...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATGTCGAGGAATACGACTaGTTCGGGCCACTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHVEEYD*FGPLKA
Trigger: GGCTTTCAGTGGCCCGAAGCAGTCGTATTCCTCGAC...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACAACTCTGGGTTCCATTaGCAGTGTTTCGAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDNSGFH*QCFEGD
Trigger: ATCACCTTCGAAACACTGGCAATGGAACCCAGAGTT...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp ACCAATTACCGCATGAACAGCCACCAGGCAGAAGACACAAGCTTTCCGAACACTATTAATTGGGTAGTCTaGAGTTTGAATGATAGGACA +
Preference number: 4 (lower is better)
Translates to: TNYRMNSHQAEDTSFPNTINWVV*SLNDRT
Trigger: TGTCCTATCATTCAAACTGCAGACTACCCAATTAAT...AGTGTTCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTGTTCATGCGGTAATTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR GCA 90 bp ACTTTGATGCACTGCTCTGGACTAATTGAAGTGGCCAACACTGATGCCGCTTCCTGTTTGCATTTTGATTaGAGCCAGATTAATTGGGTA +
Preference number: 4 (lower is better)
Translates to: TLMHCSGLIEVANTDAASCLHFD*SQINWV
Trigger: TACCCAATTAATCTGGCTGCAATCAAAATGCAAACA...GGAAGCGGCATCAGTGTTGGCCACTTCAATTAGTCCAGAGCAGTGCATCAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR GCA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTAAGCTTTCCGAACACTaGTCTCTGAATTATCATAAC +
Preference number: 4 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELKLSEH*SLNYHN
Trigger: GTTATGATAATTCAGAGAGCAGTGTTCGGAAAGCTT...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGAAGCTTTCCGAACACTaGTCTCTGAATTATCATAAC +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDEKLSEH*SLNYHN
Trigger: GTTATGATAATTCAGAGAGCAGTGTTCGGAAAGCTT...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTTCCAGAACCTGTTTGTaGACGTTTGATGTAAAGATT +
Preference number: 4 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELSRTCL*TFDVKI
Trigger: AATCTTTACATCAAACGTGCACAAACAGGTTCTGGA...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTGCTTCCTTGCACTGTTaGCAGGATTTCCGGATGTTT +
Preference number: 4 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLASLHC*QDFRMF
Trigger: AAACATCCGGAAATCCTGCCAACAGTGCAAGGAAGC...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACGCTTCTCTAACCACCTaGGATCTAAGATCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDASLTT*DLRSLA
Trigger: AGCTAAGGATCTTAGATCCCAGGTGGTTAGAGAAGC...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGGCTTCTCTAACCACCTaGGATCTAAGATCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLASLTT*DLRSLA
Trigger: AGCTAAGGATCTTAGATCCCAGGTGGTTAGAGAAGC...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACTTCTTGCCTCCACTCTaGCCTCAGCGTCAGCATCAT +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDFLPPL*PQRQHH
Trigger: ATGATGCTGACGCTGAGGCCAGAGTGGAGGCAAGAA...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR CCA 90 bp GGATTCAAGAATTGTTTCTTTGATCAAGACGATGATGAGAACAAGGGAAAAGGATTCTTGCCTCCACTCTaGCCTCAGCGTCAGCATCAT +
Preference number: 4 (lower is better)
Translates to: GFKNCFFDQDDDENKGKGFLPPL*PQRQHH
Trigger: ATGATGCTGACGCTGAGGCCAGAGTGGAGGCAAGAA...TCCTTTTCCCTTGTTCTCATCATCGTCTTGATCAAAGAAACAATTCTTGAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR CCA 90 bp AAGAAAACAGGAAAGTTAGATACAAGCCAATTCCCTTCCCAAACCCCCTTAGAAGACTTTCCTGTGAGCTaGATGAGGACCTGTCTGATT +
Preference number: 4 (lower is better)
Translates to: KKTGKLDTSQFPSQTPLEDFPVS*MRTCLI
Trigger: AATCAGACAGGTCCTCATCCAGCTCACAGGAAAGTC...TTCTAAGGGGGTTTGGGAAGGGAATTGGCTTGTATCTAACTTTCCTGTTTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR CCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTACGCTGCAGGCTTCCTaGAAGGGAACTGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFTLQAS*KGTGFA
Trigger: AGCAAAGCCAGTTCCCTTCCAGGAAGCCTGCAGCGT...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTCCTTCTGCTGCACCTaGGCGCAGAAGTACTCCATG +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHSFCCT*AQKYSM
Trigger: CATGGAGTACTTCTGCGCCCAGGTGCAGCAGAAGGA...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR CCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGCTCGAACCTTGTCTTTaGCATCTCCCATTCTGTCTA +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLLEPCL*HLPFCL
Trigger: TAGACAGAATGGGAGATGCCAAAGACAAGGTTCGAG...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR CCA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCTCGAACCTTGTCTTTaGCATCTCCCATTCTGTCTA +
Preference number: 4 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVLEPCL*HLPFCL
Trigger: TAGACAGAATGGGAGATGCCAAAGACAAGGTTCGAG...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR CCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCCTCGAACCTTGTCTTTaGCATCTCCCATTCTGTCTA +
Preference number: 4 (lower is better)
Translates to: SHKRSPAVVQISPALFHILEPCL*HLPFCL
Trigger: TAGACAGAATGGGAGATGCCAAAGACAAGGTTCGAG...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR CCA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTTGGACAGGGCTGTTGTaGTCAGAACTCTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFWTGLL*SELFLE
Trigger: CTCCAGGAAGAGTTCTGACCACAACAGCCCTGTCCA...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTTCTCTGCTACAGCCCTaGCTCCGTGGTATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFSLLQP*LRGILL
Trigger: AAGCAAGATACCACGGAGCCAGGGCTGTAGCAGAGA...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGCGGAAGCTGAAATTCTaGATTGCTTCAGTGACACCT +
Preference number: 4 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLRKLKF*IASVTP
Trigger: AGGTGTCACTGAAGCAATCCAGAATTTCAGCTTCCG...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGCGGAAGCTGAAATTCTaGATTGCTTCAGTGACACCT +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLRKLKF*IASVTP
Trigger: AGGTGTCACTGAAGCAATCCAGAATTTCAGCTTCCG...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGGAAGCTGAAATTCTaGATTGCTTCAGTGACACCT +
Preference number: 4 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVRKLKF*IASVTP
Trigger: AGGTGTCACTGAAGCAATCCAGAATTTCAGCTTCCG...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCGGAAGCTGAAATTCTaGATTGCTTCAGTGACACCT +
Preference number: 4 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDRKLKF*IASVTP
Trigger: AGGTGTCACTGAAGCAATCCAGAATTTCAGCTTCCG...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCAGATCGTCAGGAAACTaGTCAGCATCATCATCAAAC +
Preference number: 4 (lower is better)
Translates to: PKKLQLMTCITITQTESSRSSGN*SASSSN
Trigger: GTTTGATGATGATGCTGACCAGTTTCCTGACGATCT...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTCTACACGCTCATTATaGTTAGACAGCTCCTTCAAC +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSSTRSL*LDSSFN
Trigger: GTTGAAGGAGCTGTCTAACCATAATGAGCGTGTAGA...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGCAGCCAGATTAATTaGGTAGTCTGCAGTTTGAAT +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRCSQIN*VVCSLN
Trigger: ATTCAAACTGCAGACTACCCAATTAATCTGGCTGCA...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCAACAGGCAGATGATTTaGTGCAGCTTTCTTAAGGGA +
Preference number: 4 (lower is better)
Translates to: PKKLQLMTCITITQTESSNRQMI*CSFLKG
Trigger: TCCCTTAAGAAAGCTGCACCAAATCATCTGCCTGTT...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGATAACTCTGCAACAATaGCAAACTGCTTCCCTAATA +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDEITLQQ*QTASLI
Trigger: TATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTAT...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTCTAAGATCCTTAGCTaGAAGTTTAAGTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSSKILS*KFKCSI
Trigger: GATGGAGCACTTAAACTTTCAGCTAAGGATCTTAGA...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AAAGTTAGATACAAGCCAATTCCCTTCCCAAACCCCCTTAGAAACCAGTGGCTATCTAAGATCCTTAGCTaGAAGTTTAAGTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: KVRYKPIPFPNPLRNQWLSKILS*KFKCSI
Trigger: GATGGAGCACTTAAACTTTCAGCTAAGGATCTTAGA...TAGCCACTGGTTTCTAAGGGGGTTTGGGAAGGGAATTGGCTTGTATCTAACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR TCA 90 bp TTTAGGGTTTGGTTAGACAGAGTAGAGCTTTGCAGTTCTCCCAGATCTCCAAAAGTTTCCCAAAACTGTTaGAAGGTGGGCTACAGTAAT +
Preference number: 4 (lower is better)
Translates to: FRVWLDRVELCSSPRSPKVSQNC*KVGYSN
Trigger: ATTACTGTAGCCCACCTTTCAACAGTTTTGGGAAAC...TTTTGGAGATCTGGGAGAACTGCAAAGCTCTACTCTGTCTAACCAAACCCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR TCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGGTTTCCCAAAACTGTTaGAAGGTGGGCTACAGTAAT +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLVSQNC*KVGYSN
Trigger: ATTACTGTAGCCCACCTTTCAACAGTTTTGGGAAAC...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGTTTCCCAAAACTGTTaGAAGGTGGGCTACAGTAAT +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPVSQNC*KVGYSN
Trigger: ATTACTGTAGCCCACCTTTCAACAGTTTTGGGAAAC...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTTCCCAAAACTGTTaGAAGGTGGGCTACAGTAAT +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLVSQNC*KVGYSN
Trigger: ATTACTGTAGCCCACCTTTCAACAGTTTTGGGAAAC...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AAAGAAAACAGGAAAGTTAGATACAAGCCAATTCCCTTCCCAAACCCCCTTAGAATCCAGAAGTTGCCATaGCTTTTGCACTATTGGGGA +
Preference number: 4 (lower is better)
Translates to: KENRKVRYKPIPFPNPLRIQKLP*LLHYWG
Trigger: TCCCCAATAGTGCAAAAGTCATGGCAACTTCTGGAT...TCTAAGGGGGTTTGGGAAGGGAATTGGCTTGTATCTAACTTTCCTGTTTTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR TCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGATCCAGAAGTTGCCATaGCTTTTGCACTATTGGGGA +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLIQKLP*LLHYWG
Trigger: TCCCCAATAGTGCAAAAGTCATGGCAACTTCTGGAT...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AAAGAAAACAGGAAAGTTAGATACAAGCCAATTCCCTTCCCAAACCCCCTTAGATGTCTTTCCAATGAATaGGTCTGCCACTCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: KENRKVRYKPIPFPNPLRCLSNE*VCHSCN
Trigger: GTTGCAAGAGTGGCAGACTCATTCATTGGAAAGACA...TCTAAGGGGGTTTGGGAAGGGAATTGGCTTGTATCTAACTTTCCTGTTTTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR TCA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTTGTCTTTCCAATGAATaGGTCTGCCACTCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFCLSNE*VCHSCN
Trigger: GTTGCAAGAGTGGCAGACTCATTCATTGGAAAGACA...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCTGTCTTTCCAATGAATaGGTCTGCCACTCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: QITLQQWQTASLIAICLFCLSNE*VCHSCN
Trigger: GTTGCAAGAGTGGCAGACTCATTCATTGGAAAGACA...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTGCATGTCTTTCCAATaGATGAGTCTGCCACTCTTG +
Preference number: 4 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLCMSFQ*MSLPLL
Trigger: CAAGAGTGGCAGACTCATTCATTGGAAAGACATGCA...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCTGCATGTCTTTCCAATaGATGAGTCTGCCACTCTTG +
Preference number: 4 (lower is better)
Translates to: QITLQQWQTASLIAICLFCMSFQ*MSLPLL
Trigger: CAAGAGTGGCAGACTCATTCATTGGAAAGACATGCA...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp AAAGAAAACAGGAAAGTTAGATACAAGCCAATTCCCTTCCCAAACCCCCTTAGATGCATGTCTTTCCAATaGATGAGTCTGCCACTCTTG +
Preference number: 4 (lower is better)
Translates to: KENRKVRYKPIPFPNPLRCMSFQ*MSLPLL
Trigger: CAAGAGTGGCAGACTCATTCATTGGAAAGACATGCA...TCTAAGGGGGTTTGGGAAGGGAATTGGCTTGTATCTAACTTTCCTGTTTTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR TCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTCAGCGTCAGCATCATaGATTCCCTTTTTAATAGTT +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRSASAS*IPFLIV
Trigger: AACTATTAAAAAGGGAATTCATGATGCTGACGCTGA...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTTTGCTGCTGCCTGCTaGTACTCTTCCAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHFAAAC*YSSSHS
Trigger: ACTGTGGCTGGAAGAGTATCAGCAGGCAGCAGCAAA...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp TCAAGAATTGTTTCTTTGATCAAGACGATGATGAGAACAAGGGAAAAGGAGAAAATCAATGTCACTTCGTaGACGCTGCAGGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: SRIVSLIKTMMRTREKEKINVTS*TLQASW
Trigger: CCAGGAAGCCTGCAGCGTTCACGAAGTGACATTGAT...TTTCTCCTTTTCCCTTGTTCTCATCATCGTCTTGATCAAAGAAACAATTCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR TCA 90 bp AAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTAGTTTCAATATCAGAGTCTaGGCTTCATCTCGAACCTTG +
Preference number: 4 (lower is better)
Translates to: KLQLMTCITITQTESSCSFNIRV*ASSRTL
Trigger: CAAGGTTCGAGATGAAGCTCAGACTCTGATATTGAA...ACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR TCA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATATAGGTGGTGCTACTTaGTCCATTAACTTCAATATC +
Preference number: 4 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDIGGAT*SINFNI
Trigger: GATATTGAAGTTAATGGATCAAGTAGCACCACCTAT...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR TCA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTGATGACTAGTGGCTaGGCCCCAAAAATGTTTAAG +
Preference number: 4 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFLMTSG*APKMFK
Trigger: CTTAAACATTTTTGGGGCTCAGCCACTAGTCATCAG...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR TCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTGCAGCATCTCTCACCTaGCTGTTGGAGTCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFAASLT*LLESPN
Trigger: GTTTGGAGACTCCAACAGTCAGGTGAGAGATGCTGC...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR TCA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAAGCAGCATCTCTCACCTaGCTGTTGGAGTCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKAASLT*LLESPN
Trigger: GTTTGGAGACTCCAACAGTCAGGTGAGAGATGCTGC...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR TCA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCCTACCAGGCTGTGATTaGGACACCATTTTTGTTCGA +
Preference number: 4 (lower is better)
Translates to: QITLQQWQTASLIAICLFLPGCD*DTIFVR
Trigger: TCGAACAAAAATGGTGTCTCAATCACAGCCTGGTAG...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCACTATAGGAGCGTTCTaGACAAGCACTAGATGCATC +
Preference number: 4 (lower is better)
Translates to: QITLQQWQTASLIAICLFTIGAF*TSTRCI
Trigger: GATGCATCTAGTGCTTGTTCAGAACGCTCCTATAGT...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGAATACTCTCTTGCCATaGGGGTCAGCAAACATTCTT +
Preference number: 4 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLNTLLP*GSANIL
Trigger: AAGAATGTTTGCTGACCCTCATGGCAAGAGAGTATT...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000461133.8
ENST00000480013.6
CDS-3UTR TCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCAATACTCTCTTGCCATaGGGGTCAGCAAACATTCTT +
Preference number: 4 (lower is better)
Translates to: SHKRSPAVVQISPALFHINTLLP*GSANIL
Trigger: AAGAATGTTTGCTGACCCTCATGGCAAGAGAGTATT...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000461133.8
ENST00000480013.6
CDS-3UTR TCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCTCCAAAAACATGCTaGATACTCTCTTGCCATGAG +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLSPKTC*ILSCHE
Trigger: CTCATGGCAAGAGAGTATTCAGCATGTTTTTGGAGA...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000461133.8
ENST00000480013.6
CDS-3UTR TCA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTCTCCAAAAACATGCTaGATACTCTCTTGCCATGAG +
Preference number: 4 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLSPKTC*ILSCHE
Trigger: CTCATGGCAAGAGAGTATTCAGCATGTTTTTGGAGA...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000461133.8
ENST00000480013.6
CDS-3UTR TCA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTTCTCCAAAAACATGCTaGATACTCTCTTGCCATGAG +
Preference number: 4 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVSPKTC*ILSCHE
Trigger: CTCATGGCAAGAGAGTATTCAGCATGTTTTTGGAGA...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000461133.8
ENST00000480013.6
CDS-3UTR TCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCACAAACAACCAATCTTaGAGATCATCTTTGTGGACT +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRTNNQS*RSSLWT
Trigger: AGTCCACAAAGATGATCTTCAAGATTGGTTGTTTGT...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTCTTGGTGTCTGGGTCTaGTCAACTGTAAATCTCATT +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPLGVWV*STVNLI
Trigger: AATGAGATTTACAGTTGATCAGACCCAGACACCAAG...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTTGGTAGCACCATCCTaGAAAGTTTTTGGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: PKKLQLMTCITITQTESSLVAPS*KVFGKA
Trigger: AGCTTTACCAAAAACTTTTCAGGATGGTGCTACCAA...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTGGTAGCACCATCCTaGAAAGTTTTTGGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSLVAPS*KVFGKA
Trigger: AGCTTTACCAAAAACTTTTCAGGATGGTGCTACCAA...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTATCAAGAGCTGTTTaGCTTGAGTCAGTAGCATCA +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSLSRAV*LESVAS
Trigger: TGATGCTACTGACTCAAGTCAAACAGCTCTTGATAA...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTGCAACTAGGTCAGAATaGTCTAGGGAAAGATCGTCA +
Preference number: 4 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFATRSE*SRERSS
Trigger: TGACGATCTTTCCCTAGATCATTCTGACCTAGTTGC...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCCTTCCAATGTTTTCATaGCAGTCAATTCTGCATAGT +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRLPMFS*QSILHS
Trigger: ACTATGCAGAATTGACTGTCATGAAAACATTGGAAG...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AGTGGGATCAGCTCCTCCAGAACCTGTTTGTGCACGTTTGATGTAAAGATTCAGCTTCCAATGTTTTCATaGCAGTCAATTCTGCATAGT +
Preference number: 4 (lower is better)
Translates to: SGISSSRTCLCTFDVKIQLPMFS*QSILHS
Trigger: ACTATGCAGAATTGACTGTCATGAAAACATTGGAAG...CTGAATCTTTACATCAAACGTGCACAAACAGGTTCTGGAGGAGCTGATCCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR TCA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGCCGAACACTGCTCTCTaGATTATCATAACCCTGTAT +
Preference number: 4 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLPNTAL*IIITLY
Trigger: ATACAGGGTTATGATAATTCAGAGAGCAGTGTTCGG...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGCCGAACACTGCTCTCTaGATTATCATAACCCTGTAT +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLPNTAL*IIITLY
Trigger: ATACAGGGTTATGATAATTCAGAGAGCAGTGTTCGG...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTCACCAATTACCGCATaGACAGCCACCAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHSPITA*TATRQK
Trigger: CTTCTGCCTGGTGGCTGTTCATGCGGTAATTGGTGA...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTTCACCAATTACCGCATaGACAGCCACCAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFSPITA*TATRQK
Trigger: CTTCTGCCTGGTGGCTGTTCATGCGGTAATTGGTGA...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATTCCAAAGGATGTGTTTaGGAACTTCCTTTCATTGAT +
Preference number: 4 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDSKGCV*ELPFID
Trigger: ATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGA...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCAAAGGGGAAAGCCTATaGCAAATCATCCATTCAGTA +
Preference number: 4 (lower is better)
Translates to: PKKLQLMTCITITQTESSKGESL*QIIHSV
Trigger: TACTGAATGGATGATTTGTCATAGGCTTTCCCCTTT...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTTGTGGTAGCTACACCTaGAAAATCTTTTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPCGSYT*KIFSPQ
Trigger: CTGAGGAGAAAAGATTTTTCAGGTGTAGCTACCACA...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000650653.1
CDS-3UTR GCA 90 bp AAAGTTAGATACAAGCCAATTCCCTTCCCAAACCCCCTTAGAAACCAGTGGCTATGCACATCCAGAAGTTaGCATGACTTTTGCACTATT +
Preference number: 4 (lower is better)
Translates to: KVRYKPIPFPNPLRNQWLCTSRS*HDFCTI
Trigger: AATAGTGCAAAAGTCATGGCAACTTCTGGATGTGCA...TAGCCACTGGTTTCTAAGGGGGTTTGGGAAGGGAATTGGCTTGTATCTAACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR GCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTGCACATCCAGAAGTTaGCATGACTTTTGCACTATT +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSCTSRS*HDFCTI
Trigger: AATAGTGCAAAAGTCATGGCAACTTCTGGATGTGCA...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp TTGGTTAGACAGAGTAGAGCTTTGCAGTTCTCCCAGATCTCCAAAAGGCTTCACAATGATAAATCTGATTaGTGCACATCCAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: LVRQSRALQFSQISKRLHNDKSD*CTSRSC
Trigger: GCAACTTCTGGATGTGCAGCAATCAGATTTATCATT...GTGAAGCCTTTTGGAGATCTGGGAGAACTGCAAAGCTCTACTCTGTCTAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR GCA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATAATGATAAATCTGATTaGTGCACATCCAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDNDKSD*CTSRSC
Trigger: GCAACTTCTGGATGTGCAGCAATCAGATTTATCATT...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACCATGTATGTCTTTCTTaGCTCCACTCTGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDHVCLS*LHSGLS
Trigger: GCTGAGGCCAGAGTGGAGGCAAGAAAGACATACATG...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR GCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACAACTGGCTTTGCTGCTaGCTGCTGATACTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDNWLCC*LLILFQ
Trigger: CTGGAAGAGTATCAGCAGGCAGCAGCAAAGCCAGTT...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR GCA 90 bp AATTGTTTCTTTGATCAAGACGATGATGAGAACAAGGGAAAAGGAGAAACAAGGAACTGGCTTTGCTGCTaGCTGCTGATACTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: NCFFDQDDDENKGKGETRNWLCC*LLILFQ
Trigger: CTGGAAGAGTATCAGCAGGCAGCAGCAAAGCCAGTT...CCTTGTTTCTCCTTTTCCCTTGTTCTCATCATCGTCTTGATCAAAGAAACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR GCA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAAGGGAACTGGCTTTGCTaGTGCCTGCTGATACTCTTC +
Preference number: 4 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKGNWLC*CLLILF
Trigger: GAAGAGTATCAGCAGGCAGCAGCAAAGCCAGTTCCC...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATGGGAACTGGCTTTGCTaGTGCCTGCTGATACTCTTC +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHGNWLC*CLLILF
Trigger: GAAGAGTATCAGCAGGCAGCAGCAAAGCCAGTTCCC...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCATACCGCCTGAACTTTaGACTTCATCAAATTTGGCA +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSIPPEL*TSSNLA
Trigger: TGCCAAATTTGATGAAGTGCAAAGTTCAGGCGGTAT...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTGCGTCATCATCTGAATaGATTCCATATGATTCATAT +
Preference number: 4 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELASSSE*IPYDSY
Trigger: ATATGAATCATATGGAATGCATTCAGATGATGACGC...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCGCCACATCTTCCGTCTaGCTCATATATGTAGGAATA +
Preference number: 4 (lower is better)
Translates to: SHKRSPAVVQISPALFHIATSSV*LIYVGI
Trigger: TATTCCTACATATATGAGGCAGACGGAAGATGTGGC...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGCCACATCTTCCGTCTaGCTCATATATGTAGGAATA +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLATSSV*LIYVGI
Trigger: TATTCCTACATATATGAGGCAGACGGAAGATGTGGC...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGCCACATCTTCCGTCTaGCTCATATATGTAGGAATA +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPATSSV*LIYVGI
Trigger: TATTCCTACATATATGAGGCAGACGGAAGATGTGGC...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGGCTGAAATTCTGGATTaGTTCAGTGACACCTCTAAG +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLAEILD*FSDTSK
Trigger: CTTAGAGGTGTCACTGAAGCAATCCAGAATTTCAGC...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGCTGAAATTCTGGATTaGTTCAGTGACACCTCTAAG +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPAEILD*FSDTSK
Trigger: CTTAGAGGTGTCACTGAAGCAATCCAGAATTTCAGC...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCGCTGAAATTCTGGATTaGTTCAGTGACACCTCTAAG +
Preference number: 4 (lower is better)
Translates to: SHKRSPAVVQISPALFHIAEILD*FSDTSK
Trigger: CTTAGAGGTGTCACTGAAGCAATCCAGAATTTCAGC...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACAGCACTTTGATGCACTaGTCTGGACTAATTGAAGTG +
Preference number: 4 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDSTLMH*SGLIEV
Trigger: CACTTCAATTAGTCCAGAGCAGTGCATCAAAGTGCT...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGAGCACTTTGATGCACTaGTCTGGACTAATTGAAGTG +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLSTLMH*SGLIEV
Trigger: CACTTCAATTAGTCCAGAGCAGTGCATCAAAGTGCT...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTTGTTTGCATTTTGATTaGAGCCAGATTAATTGGGTA +
Preference number: 4 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELCLHFD*SQINWV
Trigger: TACCCAATTAATCTGGCTGCAATCAAAATGCAAACA...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTTCTATCACTTTTGTTTaGATTTTGATTGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELSITFV*ILIAAR
Trigger: TCTGGCTGCAATCAAAATGCAAACAAAAGTGATAGA...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp AGTGGGATCAGCTCCTCCAGAACCTGTTTGTGCACGTTTGATGTAAAGATTCAGAAGCTTTCCGAACACTaGTCTCTGAATTATCATAAC +
Preference number: 4 (lower is better)
Translates to: SGISSSRTCLCTFDVKIQKLSEH*SLNYHN
Trigger: GTTATGATAATTCAGAGAGCAGTGTTCGGAAAGCTT...CTGAATCTTTACATCAAACGTGCACAAACAGGTTCTGGAGGAGCTGATCCCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR GCA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATTCCAGAACCTGTTTGTaGACGTTTGATGTAAAGATT +
Preference number: 4 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDSRTCL*TFDVKI
Trigger: AATCTTTACATCAAACGTGCACAAACAGGTTCTGGA...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCAGGCAGATGATTTGGTaGAGCTTTCTTAAGGGATCA +
Preference number: 4 (lower is better)
Translates to: SHKRSPAVVQISPALFHIRQMIW*SFLKGS
Trigger: TGATCCCTTAAGAAAGCTGCACCAAATCATCTGCCT...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp AAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTAGTAGGCAGATGATTTGGTaGAGCTTTCTTAAGGGATCA +
Preference number: 4 (lower is better)
Translates to: KLQLMTCITITQTESSCSRQMIW*SFLKGS
Trigger: TGATCCCTTAAGAAAGCTGCACCAAATCATCTGCCT...ACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGAGGCAGATGATTTGGTaGAGCTTTCTTAAGGGATCA +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLRQMIW*SFLKGS
Trigger: TGATCCCTTAAGAAAGCTGCACCAAATCATCTGCCT...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCGCAACAATGGCAAACTaGTTCCCTAATAGCTATTTG +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSATMAN*FPNSYL
Trigger: CAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGC...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAACTGAGAGCCAATAAATaGCATCCCGCTGGGGGACTT +
Preference number: 4 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKLRANK*HPAGGL
Trigger: AAGTCCCCCAGCGGGATGGCATTTATTGGCTCTCAG...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTCTCCTTGTACTGGCTaGCTGAAATTTAATCTAAGA +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRSPCTG*LKFNLR
Trigger: TCTTAGATTAAATTTCAGGCAGCCAGTACAAGGAGA...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp TTGGTTAGACAGAGTAGAGCTTTGCAGTTCTCCCAGATCTCCAAAAGGCTTCACAAAACTGTTGAAAGGTaGGCTACAGTAATACAAGCT +
Preference number: 4 (lower is better)
Translates to: LVRQSRALQFSQISKRLHKTVER*ATVIQA
Trigger: AGCTTGTATTACTGTAGCCCACCTTTCAACAGTTTT...GTGAAGCCTTTTGGAGATCTGGGAGAACTGCAAAGCTCTACTCTGTCTAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR CCA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATAAAACTGTTGAAAGGTaGGCTACAGTAATACAAGCT +
Preference number: 4 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDKTVER*ATVIQA
Trigger: AGCTTGTATTACTGTAGCCCACCTTTCAACAGTTTT...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTTCTTGCCTCCACTCTaGCCTCAGCGTCAGCATCAT +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHFLPPL*PQRQHH
Trigger: ATGATGCTGACGCTGAGGCCAGAGTGGAGGCAAGAA...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTTGGACAGGGCTGTTGTaGTCAGAACTCTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFWTGLL*SELFLE
Trigger: CTCCAGGAAGAGTTCTGACCACAACAGCCCTGTCCA...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTTCTCTGCTACAGCCCTaGCTCCGTGGTATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFSLLQP*LRGILL
Trigger: AAGCAAGATACCACGGAGCCAGGGCTGTAGCAGAGA...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTCTCTGCTACAGCCCTaGCTCCGTGGTATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHSLLQP*LRGILL
Trigger: AAGCAAGATACCACGGAGCCAGGGCTGTAGCAGAGA...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTCATTCATATCTTCTTaGCTACGGAAGCTGAAATTC +
Preference number: 4 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRSFISS*LRKLKF
Trigger: GAATTTCAGCTTCCGTAGCCAAGAAGATATGAATGA...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGAGAATCCCTTTTCAATaGCTCATTCATATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDERIPFQ*LIHIFL
Trigger: CAAGAAGATATGAATGAGCCATTGAAAAGGGATTCT...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp TGTTTGCATTTTGATTGCAGCCAGATTAATTGGGTAGTCTGCAGTTTGAATGATATAGTCTCGAGAGCGTaGAGAGGAGTGAGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: CLHFDCSQINWVVCSLNDIVSRA*RGVSRH
Trigger: ATGCCTACTCACTCCTCTCCACGCTCTCGAGACTAT...ATCATTCAAACTGCAGACTACCCAATTAATCTGGCTGCAATCAAAATGCAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR CCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGAGATCGTCAGGAAACTaGTCAGCATCATCATCAAAC +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLRSSGN*SASSSN
Trigger: GTTTGATGATGATGCTGACCAGTTTCCTGACGATCT...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGAGATCGTCAGGAAACTaGTCAGCATCATCATCAAAC +
Preference number: 4 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLRSSGN*SASSSN
Trigger: GTTTGATGATGATGCTGACCAGTTTCCTGACGATCT...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGAGATCGTCAGGAAACTaGTCAGCATCATCATCAAAC +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLRSSGN*SASSSN
Trigger: GTTTGATGATGATGCTGACCAGTTTCCTGACGATCT...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTTCTACACGCTCATTATaGTTAGACAGCTCCTTCAAC +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPSTRSL*LDSSFN
Trigger: GTTGAAGGAGCTGTCTAACCATAATGAGCGTGTAGA...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCTCTACACGCTCATTATaGTTAGACAGCTCCTTCAAC +
Preference number: 4 (lower is better)
Translates to: SHKRSPAVVQISPALFHISTRSL*LDSSFN
Trigger: GTTGAAGGAGCTGTCTAACCATAATGAGCGTGTAGA...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCTACACGCTCATTATaGTTAGACAGCTCCTTCAAC +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLSTRSL*LDSSFN
Trigger: GTTGAAGGAGCTGTCTAACCATAATGAGCGTGTAGA...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGCAGCCAGATTAATTaGGTAGTCTGCAGTTTGAAT +
Preference number: 4 (lower is better)
Translates to: PKKLQLMTCITITQTESSCSQIN*VVCSLN
Trigger: ATTCAAACTGCAGACTACCCAATTAATCTGGCTGCA...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTGCAGCCAGATTAATTaGGTAGTCTGCAGTTTGAAT +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSCSQIN*VVCSLN
Trigger: ATTCAAACTGCAGACTACCCAATTAATCTGGCTGCA...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGGGTTTAGGGTTTCCTTaGACACTCTCTCTATCACTT +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLGLGFP*TLSLSL
Trigger: AAGTGATAGAGAGAGTGTCCAAGGAAACCCTAAACC...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGGTTTAGGGTTTCCTTaGACACTCTCTCTATCACTT +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLGLGFP*TLSLSL
Trigger: AAGTGATAGAGAGAGTGTCCAAGGAAACCCTAAACC...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTGGTTTAGGGTTTCCTTaGACACTCTCTCTATCACTT +
Preference number: 4 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVGLGFP*TLSLSL
Trigger: AAGTGATAGAGAGAGTGTCCAAGGAAACCCTAAACC...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTTAGGGTTTCCTTaGACACTCTCTCTATCACTT +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPGLGFP*TLSLSL
Trigger: AAGTGATAGAGAGAGTGTCCAAGGAAACCCTAAACC...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTAACAGGCAGATGATTTaGTGCAGCTTTCTTAAGGGA +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPNRQMI*CSFLKG
Trigger: TCCCTTAAGAAAGCTGCACCAAATCATCTGCCTGTT...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCTTAAAGAAAAGGTGCTaGTCACTCCCATGTCTCGAT +
Preference number: 4 (lower is better)
Translates to: SHKRSPAVVQISPALFHILKKRC*SLPCLD
Trigger: ATCGAGACATGGGAGTGACCAGCACCTTTTCTTTAA...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACTTAAAGAAAAGGTGCTaGTCACTCCCATGTCTCGAT +
Preference number: 4 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDLKKRC*SLPCLD
Trigger: ATCGAGACATGGGAGTGACCAGCACCTTTTCTTTAA...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACGTCGCCTCATTCCTCTaGAAGCTCTTAATTTCCCTC +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDVASFL*KLLISL
Trigger: GAGGGAAATTAAGAGCTTTCAGAGGAATGAGGCGAC...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR TCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACAGTGCATTGGCACGCTaGTCCCAGTCATGTTTATCA +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDSALAR*SQSCLS
Trigger: TGATAAACATGACTGGGATCAGCGTGCCAATGCACT...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR TCA 90 bp GGATTCAAGAATTGTTTCTTTGATCAAGACGATGATGAGAACAAGGGAAAAGGAAGTGCATTGGCACGCTaGTCCCAGTCATGTTTATCA +
Preference number: 4 (lower is better)
Translates to: GFKNCFFDQDDDENKGKGSALAR*SQSCLS
Trigger: TGATAAACATGACTGGGATCAGCGTGCCAATGCACT...TCCTTTTCCCTTGTTCTCATCATCGTCTTGATCAAAGAAACAATTCTTGAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR TCA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACTCTAAGATCCTTAGCTaGAAGTTTAAGTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDSKILS*KFKCSI
Trigger: GATGGAGCACTTAAACTTTCAGCTAAGGATCTTAGA...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTTCTAAGATCCTTAGCTaGAAGTTTAAGTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVSKILS*KFKCSI
Trigger: GATGGAGCACTTAAACTTTCAGCTAAGGATCTTAGA...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCGTTTCCCAAAACTGTTaGAAGGTGGGCTACAGTAAT +
Preference number: 4 (lower is better)
Translates to: QITLQQWQTASLIAICLFVSQNC*KVGYSN
Trigger: ATTACTGTAGCCCACCTTTCAACAGTTTTGGGAAAC...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp AAGAAAACAGGAAAGTTAGATACAAGCCAATTCCCTTCCCAAACCCCCTTAGAAGTTTCCCAAAACTGTTaGAAGGTGGGCTACAGTAAT +
Preference number: 4 (lower is better)
Translates to: KKTGKLDTSQFPSQTPLEVSQNC*KVGYSN
Trigger: ATTACTGTAGCCCACCTTTCAACAGTTTTGGGAAAC...TTCTAAGGGGGTTTGGGAAGGGAATTGGCTTGTATCTAACTTTCCTGTTTTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR TCA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTGTTTCCCAAAACTGTTaGAAGGTGGGCTACAGTAAT +
Preference number: 4 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLVSQNC*KVGYSN
Trigger: ATTACTGTAGCCCACCTTTCAACAGTTTTGGGAAAC...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AAAGTTAGATACAAGCCAATTCCCTTCCCAAACCCCCTTAGAAACCAGTGGCTAATAAGTCTGGGTACATaGGTATGCCGAATGATAAAT +
Preference number: 4 (lower is better)
Translates to: KVRYKPIPFPNPLRNQWLISLGT*VCRMIN
Trigger: ATTTATCATTCGGCATACTCATGTACCCAGACTTAT...TAGCCACTGGTTTCTAAGGGGGTTTGGGAAGGGAATTGGCTTGTATCTAACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR TCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCATAAGTCTGGGTACATaGGTATGCCGAATGATAAAT +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSISLGT*VCRMIN
Trigger: ATTTATCATTCGGCATACTCATGTACCCAGACTTAT...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTCAGCGTCAGCATCATaGATTCCCTTTTTAATAGTT +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSSASAS*IPFLIV
Trigger: AACTATTAAAAAGGGAATTCATGATGCTGACGCTGA...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACTCTTCCAGCCACAGTTaGTGGATTTGCTGTAGACCA +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDSSSHS*WICCRP
Trigger: TGGTCTACAGCAAATCCATCAACTGTGGCTGGAAGA...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR TCA 90 bp GGATTCAAGAATTGTTTCTTTGATCAAGACGATGATGAGAACAAGGGAAAAGGATCTTCCAGCCACAGTTaGTGGATTTGCTGTAGACCA +
Preference number: 4 (lower is better)
Translates to: GFKNCFFDQDDDENKGKGSSSHS*WICCRP
Trigger: TGGTCTACAGCAAATCCATCAACTGTGGCTGGAAGA...TCCTTTTCCCTTGTTCTCATCATCGTCTTGATCAAAGAAACAATTCTTGAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR TCA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCAAAATCATACCGCCTaGACTTTGCACTTCATCAAA +
Preference number: 4 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDQNHTA*TLHFIK
Trigger: TTTGATGAAGTGCAAAGTTCAGGCGGTATGATTTTG...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR TCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTTTGACCAGGACTCTTTaGACACCAGAGCTCACAGTG +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFLTRTL*TPELTV
Trigger: CACTGTGAGCTCTGGTGTTCAAAGAGTCCTGGTCAA...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAATTGACCAGGACTCTTTaGACACCAGAGCTCACAGTG +
Preference number: 4 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKLTRTL*TPELTV
Trigger: CACTGTGAGCTCTGGTGTTCAAAGAGTCCTGGTCAA...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAAGTGCTGAGGCTGAATTaGCCAGGACTCTTTGAACAC +
Preference number: 4 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKVLRLN*PGLFEH
Trigger: GTGTTCAAAGAGTCCTGGTCAATTCAGCCTCAGCAC...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAAAGACGACAGTCGACTTaGTTGGCTGATCCCATAACC +
Preference number: 4 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKRRQST*LADPIT
Trigger: GGTTATGGGATCAGCCAATCAAGTCGACTGTCGTCT...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCACAAACAACCAATCTTaGAGATCATCTTTGTGGACT +
Preference number: 4 (lower is better)
Translates to: PKKLQLMTCITITQTESSTNNQS*RSSLWT
Trigger: AGTCCACAAAGATGATCTTCAAGATTGGTTGTTTGT...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCACAAACAACCAATCTTaGAGATCATCTTTGTGGACT +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSTNNQS*RSSLWT
Trigger: AGTCCACAAAGATGATCTTCAAGATTGGTTGTTTGT...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTGGTGTCTGGGTCTaGTCAACTGTAAATCTCATT +
Preference number: 4 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFLGVWV*STVNLI
Trigger: AATGAGATTTACAGTTGATCAGACCCAGACACCAAG...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGCTTGGTGTCTGGGTCTaGTCAACTGTAAATCTCATT +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLLGVWV*STVNLI
Trigger: AATGAGATTTACAGTTGATCAGACCCAGACACCAAG...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTTGGTAGCACCATCCTaGAAAGTTTTTGGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLLVAPS*KVFGKA
Trigger: AGCTTTACCAAAAACTTTTCAGGATGGTGCTACCAA...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTAGTTTATCAAGAGCTGTTTaGCTTGAGTCAGTAGCATCA +
Preference number: 4 (lower is better)
Translates to: KLQLMTCITITQTESSCSLSRAV*LESVAS
Trigger: TGATGCTACTGACTCAAGTCAAACAGCTCTTGATAA...ACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCTTATCAAGAGCTGTTTaGCTTGAGTCAGTAGCATCA +
Preference number: 4 (lower is better)
Translates to: SHKRSPAVVQISPALFHILSRAV*LESVAS
Trigger: TGATGCTACTGACTCAAGTCAAACAGCTCTTGATAA...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp CACCTAATGCTATTGCTCAGTTGCTTTCTCTTAGAAATACAGTCCTTACAGAACGCAACTAGGTCAGAATaGTCTAGGGAAAGATCGTCA +
Preference number: 4 (lower is better)
Translates to: HLMLLLSCFLLEIQSLQNATRSE*SRERSS
Trigger: TGACGATCTTTCCCTAGATCATTCTGACCTAGTTGC...GTTCTGTAAGGACTGTATTTCTAAGAGAAAGCAACTGAGCAATAGCATTAGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR TCA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCCCGAACACTGCTCTCTaGATTATCATAACCCTGTAT +
Preference number: 4 (lower is better)
Translates to: QITLQQWQTASLIAICLFPNTAL*IIITLY
Trigger: ATACAGGGTTATGATAATTCAGAGAGCAGTGTTCGG...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTTTACTGCCAGTAAGTTaGCTGAGATGTGGTTTTAGT +
Preference number: 4 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVLLPVS*LRCGFS
Trigger: ACTAAAACCACATCTCAGTCAACTTACTGGCAGTAA...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCTTACTGCCAGTAAGTTaGCTGAGATGTGGTTTTAGT +
Preference number: 4 (lower is better)
Translates to: SHKRSPAVVQISPALFHILLPVS*LRCGFS
Trigger: ACTAAAACCACATCTCAGTCAACTTACTGGCAGTAA...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTTACTGCCAGTAAGTTaGCTGAGATGTGGTTTTAGT +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLLLPVS*LRCGFS
Trigger: ACTAAAACCACATCTCAGTCAACTTACTGGCAGTAA...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACTTACTGCCAGTAAGTTaGCTGAGATGTGGTTTTAGT +
Preference number: 4 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDLLPVS*LRCGFS
Trigger: ACTAAAACCACATCTCAGTCAACTTACTGGCAGTAA...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTTTTACAGAACTGGCTaGTTCTGTAACATCTGTCTT +
Preference number: 4 (lower is better)
Translates to: PKKLQLMTCITITQTESSFYRTG*FCNICL
Trigger: AAGACAGATGTTACAGAATCAGCCAGTTCTGTAAAA...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGTGTGGTAGCTACACCTaGAAAATCTTTTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLCGSYT*KIFSPQ
Trigger: CTGAGGAGAAAAGATTTTTCAGGTGTAGCTACCACA...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000650653.1
CDS-3UTR TCA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTGTGGTAGCTACACCTaGAAAATCTTTTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLCGSYT*KIFSPQ
Trigger: CTGAGGAGAAAAGATTTTTCAGGTGTAGCTACCACA...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000650653.1
CDS-3UTR TCA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTGTTGGATACAGGTTATaGTGTTTCTCCTTGTACTGG +
Preference number: 4 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFVGYRL*CFSLYW
Trigger: CCAGTACAAGGAGAAACATCATAACCTGTATCCAAC...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCAGCCTAGAAGGACTTaGTTAAGATTACTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVQPRRT*LRLLFS
Trigger: GCTAAAGAGTAATCTTAATCAAGTCCTTCTAGGCTG...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAATCACAGATCCGTTTaGAAATCAGTCGCCTCATTC +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLNHRSV*KSVASF
Trigger: GAATGAGGCGACTGATTTGCAAACGGATCTGTGATT...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635664.1
CDS-3UTR GCA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACTGCACATCCAGAAGTTaGCATGACTTTTGCACTATT +
Preference number: 4 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDCTSRS*HDFCTI
Trigger: AATAGTGCAAAAGTCATGGCAACTTCTGGATGTGCA...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTTGCACATCCAGAAGTTaGCATGACTTTTGCACTATT +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPCTSRS*HDFCTI
Trigger: AATAGTGCAAAAGTCATGGCAACTTCTGGATGTGCA...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTTGCACATCCAGAAGTTaGCATGACTTTTGCACTATT +
Preference number: 4 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVCTSRS*HDFCTI
Trigger: AATAGTGCAAAAGTCATGGCAACTTCTGGATGTGCA...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGATAAATCTGATTGCTaGACATCCAGAAGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLDKSDC*TSRSCH
Trigger: ATGGCAACTTCTGGATGTGCAGCAATCAGATTTATC...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGATAAATCTGATTGCTaGACATCCAGAAGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPDKSDC*TSRSCH
Trigger: ATGGCAACTTCTGGATGTGCAGCAATCAGATTTATC...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCAATGATAAATCTGATTaGTGCACATCCAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSNDKSD*CTSRSC
Trigger: GCAACTTCTGGATGTGCAGCAATCAGATTTATCATT...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGGAAGAGATGCTACACTaGCAGAACTCTTTAAGTAAG +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLEEMLH*QNSLSK
Trigger: CTTACTTAAAGAGTTCTGGCAGTGTAGCATCTCTTC...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp CCAGTGGCTAGATGTGGTAGAAGTGCAGTTATGAAAATTCTACAGGCAATCATGGAAGAGATGCTACACTaGCAGAACTCTTTAAGTAAG +
Preference number: 4 (lower is better)
Translates to: PVARCGRSAVMKILQAIMEEMLH*QNSLSK
Trigger: CTTACTTAAAGAGTTCTGGCAGTGTAGCATCTCTTC...CATGATTGCCTGTAGAATTTTCATAACTGCACTTCTACCACATCTAGCCACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR GCA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAAAACTGGCTTTGCTGCTaGCTGCTGATACTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKNWLCC*LLILFQ
Trigger: CTGGAAGAGTATCAGCAGGCAGCAGCAAAGCCAGTT...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTAACTGGCTTTGCTGCTaGCTGCTGATACTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFNWLCC*LLILFQ
Trigger: CTGGAAGAGTATCAGCAGGCAGCAGCAAAGCCAGTT...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACATGTGCCTTGGCACCTaGAGCAGCATTCACATCAAT +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDMCLGT*SSIHIN
Trigger: ATTGATGTGAATGCTGCTGCAGGTGCCAAGGCACAT...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR GCA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTATGTGCCTTGGCACCTaGAGCAGCATTCACATCAAT +
Preference number: 4 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFMCLGT*SSIHIN
Trigger: ATTGATGTGAATGCTGCTGCAGGTGCCAAGGCACAT...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp GGATTCAAGAATTGTTTCTTTGATCAAGACGATGATGAGAACAAGGGAAAAGGAATGTGCCTTGGCACCTaGAGCAGCATTCACATCAAT +
Preference number: 4 (lower is better)
Translates to: GFKNCFFDQDDDENKGKGMCLGT*SSIHIN
Trigger: ATTGATGTGAATGCTGCTGCAGGTGCCAAGGCACAT...TCCTTTTCCCTTGTTCTCATCATCGTCTTGATCAAAGAAACAATTCTTGAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR GCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACGACAGAGTAGAGCTTTaGAGTTCTCCCAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDDRVEL*SSPRSP
Trigger: TGGAGATCTGGGAGAACTGCAAAGCTCTACTCTGTC...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR GCA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATAGCTACAATAACCATTaGTACATAGGATTTAAAGCG +
Preference number: 4 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDSYNNH*YIGFKA
Trigger: CGCTTTAAATCCTATGTAGCAATGGTTATTGTAGCT...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCCACTATAGCCAATATTaGAGCATCTCTCACCTGACT +
Preference number: 4 (lower is better)
Translates to: QITLQQWQTASLIAICLFHYSQY*SISHLT
Trigger: AGTCAGGTGAGAGATGCTGCAATATTGGCTATAGTG...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGATACCGCCTGAACTTTaGACTTCATCAAATTTGGCA +
Preference number: 4 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLIPPEL*TSSNLA
Trigger: TGCCAAATTTGATGAAGTGCAAAGTTCAGGCGGTAT...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGCGTCATCATCTGAATaGATTCCATATGATTCATAT +
Preference number: 4 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDASSSE*IPYDSY
Trigger: ATATGAATCATATGGAATGCATTCAGATGATGACGC...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTGCTGAAATTCTGGATTaGTTCAGTGACACCTCTAAG +
Preference number: 4 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLAEILD*FSDTSK
Trigger: CTTAGAGGTGTCACTGAAGCAATCCAGAATTTCAGC...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCAGCACTTTGATGCACTaGTCTGGACTAATTGAAGTG +
Preference number: 4 (lower is better)
Translates to: QITLQQWQTASLIAICLFSTLMH*SGLIEV
Trigger: CACTTCAATTAGTCCAGAGCAGTGCATCAAAGTGCT...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATATTAATTGGGTAGTCTaGAGTTTGAATGATAGGACA +
Preference number: 4 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDINWVV*SLNDRT
Trigger: TGTCCTATCATTCAAACTGCAGACTACCCAATTAAT...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCAGGCAGATGATTTGGTaGAGCTTTCTTAAGGGATCA +
Preference number: 4 (lower is better)
Translates to: QITLQQWQTASLIAICLFRQMIW*SFLKGS
Trigger: TGATCCCTTAAGAAAGCTGCACCAAATCATCTGCCT...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGCAACAATGGCAAACTaGTTCCCTAATAGCTATTTG +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLATMAN*FPNSYL
Trigger: CAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGC...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp AACATCAGTAGTGGGATCAGCTCCTCCAGAACCTGTTTGTGCACGTTTGATGTAATGCTATTGCTCAGTTaGTTTCTCTTAGAAATACAG +
Preference number: 4 (lower is better)
Translates to: NISSGISSSRTCLCTFDVMLLLS*FLLEIQ
Trigger: CTGTATTTCTAAGAGAAAGCAACTGAGCAATAGCAT...TACATCAAACGTGCACAAACAGGTTCTGGAGGAGCTGATCCCACTACTGATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR GCA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCAGATTACTCTTTAGCTaGACATATGCTGTTGGATAC +
Preference number: 4 (lower is better)
Translates to: PKKLQLMTCITITQTESSRLLFS*TYAVGY
Trigger: GTATCCAACAGCATATGTGCAGCTAAAGAGTAATCT...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACGCTTCCTTGCACTGTTaGCAGGATTTCCGGATGTTT +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDASLHC*QDFRMF
Trigger: AAACATCCGGAAATCCTGCCAACAGTGCAAGGAAGC...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR CCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCAAAACTGTTGAAAGGTaGGCTACAGTAATACAAGCT +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSKTVER*ATVIQA
Trigger: AGCTTGTATTACTGTAGCCCACCTTTCAACAGTTTT...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACGACTTTCCTGTGAGCTaGATGAGGACCTGTCTGATT +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDDFPVS*MRTCLI
Trigger: AATCAGACAGGTCCTCATCCAGCTCACAGGAAAGTC...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR CCA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTGACTTTCCTGTGAGCTaGATGAGGACCTGTCTGATT +
Preference number: 4 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFDFPVS*MRTCLI
Trigger: AATCAGACAGGTCCTCATCCAGCTCACAGGAAAGTC...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp AATTGTTTCTTTGATCAAGACGATGATGAGAACAAGGGAAAAGGAGAAACAAGGCCCCTTAGAAACCAGTaGCTAGATGTGGTAGAAGTG +
Preference number: 4 (lower is better)
Translates to: NCFFDQDDDENKGKGETRPLRNQ*LDVVEV
Trigger: CACTTCTACCACATCTAGCCACTGGTTTCTAAGGGG...CCTTGTTTCTCCTTTTCCCTTGTTCTCATCATCGTCTTGATCAAAGAAACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR CCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCCAGGATACACAAATGTaGTATCAATTTGCTGATGAC +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSQDTQM*YQFADD
Trigger: GTCATCAGCAAATTGATACCACATTTGTGTATCCTG...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR CCA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCCAGGATACACAAATGTaGTATCAATTTGCTGATGAC +
Preference number: 4 (lower is better)
Translates to: PKKLQLMTCITITQTESSQDTQM*YQFADD
Trigger: GTCATCAGCAAATTGATACCACATTTGTGTATCCTG...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR CCA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAATCAAAGGACTCCCCATaGAACTCTGGGTTCCATTGC +
Preference number: 4 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKSKDSP*NSGFHC
Trigger: GCAATGGAACCCAGAGTTCCATGGGGAGTCCTTTGA...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTCATTCATATCTTCTTaGCTACGGAAGCTGAAATTC +
Preference number: 4 (lower is better)
Translates to: PKKLQLMTCITITQTESSSFISS*LRKLKF
Trigger: GAATTTCAGCTTCCGTAGCCAAGAAGATATGAATGA...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTATAGTCTCGAGAGCGTaGAGAGGAGTGAGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFIVSRA*RGVSRH
Trigger: ATGCCTACTCACTCCTCTCCACGCTCTCGAGACTAT...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCAGATCGTCAGGAAACTaGTCAGCATCATCATCAAAC +
Preference number: 4 (lower is better)
Translates to: QITLQQWQTASLIAICLFRSSGN*SASSSN
Trigger: GTTTGATGATGATGCTGACCAGTTTCCTGACGATCT...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTTGCAGCCAGATTAATTaGGTAGTCTGCAGTTTGAAT +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPCSQIN*VVCSLN
Trigger: ATTCAAACTGCAGACTACCCAATTAATCTGGCTGCA...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTAACAGGCAGATGATTTaGTGCAGCTTTCTTAAGGGA +
Preference number: 4 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFNRQMI*CSFLKG
Trigger: TCCCTTAAGAAAGCTGCACCAAATCATCTGCCTGTT...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTAAAGAAAAGGTGCTaGTCACTCCCATGTCTCGAT +
Preference number: 4 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLLKKRC*SLPCLD
Trigger: ATCGAGACATGGGAGTGACCAGCACCTTTTCTTTAA...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCCCATAGCCATTAGATaGTCCAGGGAGCTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFPIAIR*SRELSE
Trigger: TTCAGAGAGCTCCCTGGACCATCTAATGGCTATGGG...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461133.8
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATCCCATAGCCATTAGATaGTCCAGGGAGCTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHPIAIR*SRELSE
Trigger: TTCAGAGAGCTCCCTGGACCATCTAATGGCTATGGG...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461133.8
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp GTGGCTAGATGTGGTAGAAGTGCAGTTATGAAAATTCTACAGGCAATCATGGATTCTAAGATCCTTAGCTaGAAGTTTAAGTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: VARCGRSAVMKILQAIMDSKILS*KFKCSI
Trigger: GATGGAGCACTTAAACTTTCAGCTAAGGATCTTAGA...ATCCATGATTGCCTGTAGAATTTTCATAACTGCACTTCTACCACATCTAGCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR TCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACATCCAGAAGTTGCCATaGCTTTTGCACTATTGGGGA +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDIQKLP*LLHYWG
Trigger: TCCCCAATAGTGCAAAAGTCATGGCAACTTCTGGAT...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR TCA 90 bp AAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTAGTATAAGTCTGGGTACATaGGTATGCCGAATGATAAAT +
Preference number: 4 (lower is better)
Translates to: KLQLMTCITITQTESSCSISLGT*VCRMIN
Trigger: ATTTATCATTCGGCATACTCATGTACCCAGACTTAT...ACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTATAAGTCTGGGTACATaGGTATGCCGAATGATAAAT +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPISLGT*VCRMIN
Trigger: ATTTATCATTCGGCATACTCATGTACCCAGACTTAT...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACTGTCTTTCCAATGAATaGGTCTGCCACTCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDCLSNE*VCHSCN
Trigger: GTTGCAAGAGTGGCAGACTCATTCATTGGAAAGACA...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR TCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACTGCATGTCTTTCCAATaGATGAGTCTGCCACTCTTG +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDCMSFQ*MSLPLL
Trigger: CAAGAGTGGCAGACTCATTCATTGGAAAGACATGCA...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR TCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTTCAGCGTCAGCATCATaGATTCCCTTTTTAATAGTT +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPSASAS*IPFLIV
Trigger: AACTATTAAAAAGGGAATTCATGATGCTGACGCTGA...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp TTTAGGGTTTGGTTAGACAGAGTAGAGCTTTGCAGTTCTCCCAGATCTCCAAAATCAGCGTCAGCATCATaGATTCCCTTTTTAATAGTT +
Preference number: 4 (lower is better)
Translates to: FRVWLDRVELCSSPRSPKSASAS*IPFLIV
Trigger: AACTATTAAAAAGGGAATTCATGATGCTGACGCTGA...TTTTGGAGATCTGGGAGAACTGCAAAGCTCTACTCTGTCTAACCAAACCCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR TCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCAGCGTCAGCATCATaGATTCCCTTTTTAATAGTT +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLSASAS*IPFLIV
Trigger: AACTATTAAAAAGGGAATTCATGATGCTGACGCTGA...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAATCTTCCAGCCACAGTTaGTGGATTTGCTGTAGACCA +
Preference number: 4 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKSSSHS*WICCRP
Trigger: TGGTCTACAGCAAATCCATCAACTGTGGCTGGAAGA...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp AAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTAGTATAGGTGGTGCTACTTaGTCCATTAACTTCAATATC +
Preference number: 4 (lower is better)
Translates to: KLQLMTCITITQTESSCSIGGAT*SINFNI
Trigger: GATATTGAAGTTAATGGATCAAGTAGCACCACCTAT...ACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR TCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGCAAAATCATACCGCCTaGACTTTGCACTTCATCAAA +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLQNHTA*TLHFIK
Trigger: TTTGATGAAGTGCAAAGTTCAGGCGGTATGATTTTG...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR TCA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTCTACCAGGCTGTGATTaGGACACCATTTTTGTTCGA +
Preference number: 4 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFLPGCD*DTIFVR
Trigger: TCGAACAAAAATGGTGTCTCAATCACAGCCTGGTAG...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTACAAACAACCAATCTTaGAGATCATCTTTGTGGACT +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPTNNQS*RSSLWT
Trigger: AGTCCACAAAGATGATCTTCAAGATTGGTTGTTTGT...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGACAAACAACCAATCTTaGAGATCATCTTTGTGGACT +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLTNNQS*RSSLWT
Trigger: AGTCCACAAAGATGATCTTCAAGATTGGTTGTTTGT...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTAGTACAAACAACCAATCTTaGAGATCATCTTTGTGGACT +
Preference number: 4 (lower is better)
Translates to: KLQLMTCITITQTESSCSTNNQS*RSSLWT
Trigger: AGTCCACAAAGATGATCTTCAAGATTGGTTGTTTGT...ACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGGTAGCACCATCCTaGAAAGTTTTTGGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLLVAPS*KVFGKA
Trigger: AGCTTTACCAAAAACTTTTCAGGATGGTGCTACCAA...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCTTGGTAGCACCATCCTaGAAAGTTTTTGGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: QITLQQWQTASLIAICLFLVAPS*KVFGKA
Trigger: AGCTTTACCAAAAACTTTTCAGGATGGTGCTACCAA...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATAAGAGCTGTTTGACTTaGGTCAGTAGCATCACCTCC +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHKSCLT*VSSITS
Trigger: GGAGGTGATGCTACTGACTCAAGTCAAACAGCTCTT...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTAGTTTAAATCTTGCTGGTTaGTGCCTTAGGATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: KLQLMTCITITQTESSCSLNLAG*CLRISL
Trigger: AAGAGAAATCCTAAGGCATCAACCAGCAAGATTTAA...ACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTTAAATCTTGCTGGTTaGTGCCTTAGGATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLLNLAG*CLRISL
Trigger: AAGAGAAATCCTAAGGCATCAACCAGCAAGATTTAA...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTTAAATCTTGCTGGTTaGTGCCTTAGGATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLLNLAG*CLRISL
Trigger: AAGAGAAATCCTAAGGCATCAACCAGCAAGATTTAA...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGCTTCCAATGTTTTCATaGCAGTCAATTCTGCATAGT +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLLPMFS*QSILHS
Trigger: ACTATGCAGAATTGACTGTCATGAAAACATTGGAAG...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTTCCAATGTTTTCATaGCAGTCAATTCTGCATAGT +
Preference number: 4 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDLPMFS*QSILHS
Trigger: ACTATGCAGAATTGACTGTCATGAAAACATTGGAAG...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAACTCACCACCTCCTTATaGGGATCTTTATGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKLTTSL*GSLCAS
Trigger: GGAAGCACATAAAGATCCTCATAAGGAGGTGGTGAG...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCTCACCACCTCCTTATaGGGATCTTTATGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFLTTSL*GSLCAS
Trigger: GGAAGCACATAAAGATCCTCATAAGGAGGTGGTGAG...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCTTACTGCCAGTAAGTTaGCTGAGATGTGGTTTTAGT +
Preference number: 4 (lower is better)
Translates to: QITLQQWQTASLIAICLFLLPVS*LRCGFS
Trigger: ACTAAAACCACATCTCAGTCAACTTACTGGCAGTAA...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTTCCAAAGGATGTGTTTaGGAACTTCCTTTCATTGAT +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPSKGCV*ELPFID
Trigger: ATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGA...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACTCCAAAGGATGTGTTTaGGAACTTCCTTTCATTGAT +
Preference number: 4 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDSKGCV*ELPFID
Trigger: ATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGA...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCTCCAAAGGATGTGTTTaGGAACTTCCTTTCATTGAT +
Preference number: 4 (lower is better)
Translates to: SHKRSPAVVQISPALFHISKGCV*ELPFID
Trigger: ATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGA...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTTTTACAGAACTGGCTaGTTCTGTAACATCTGTCTT +
Preference number: 4 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLFYRTG*FCNICL
Trigger: AAGACAGATGTTACAGAATCAGCCAGTTCTGTAAAA...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCCCATTTTTAAGTAGCTaGCATCTCAGTATGTTTCTG +
Preference number: 4 (lower is better)
Translates to: SHKRSPAVVQISPALFHIPFLSS*HLSMFL
Trigger: CAGAAACATACTGAGATGTCAGCTACTTAAAAATGG...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000650653.1
CDS-3UTR TCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGCAGCCTAGAAGGACTTaGTTAAGATTACTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLQPRRT*LRLLFS
Trigger: GCTAAAGAGTAATCTTAATCAAGTCCTTCTAGGCTG...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGTGCACATCCAGAAGTTaGCATGACTTTTGCACTATT +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLCTSRS*HDFCTI
Trigger: AATAGTGCAAAAGTCATGGCAACTTCTGGATGTGCA...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCGATAAATCTGATTGCTaGACATCCAGAAGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: QITLQQWQTASLIAICLFDKSDC*TSRSCH
Trigger: ATGGCAACTTCTGGATGTGCAGCAATCAGATTTATC...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGAATGATAAATCTGATTaGTGCACATCCAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLNDKSD*CTSRSC
Trigger: GCAACTTCTGGATGTGCAGCAATCAGATTTATCATT...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTAATGATAAATCTGATTaGTGCACATCCAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVNDKSD*CTSRSC
Trigger: GCAACTTCTGGATGTGCAGCAATCAGATTTATCATT...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCGAAGAGATGCTACACTaGCAGAACTCTTTAAGTAAG +
Preference number: 4 (lower is better)
Translates to: QITLQQWQTASLIAICLFEEMLH*QNSLSK
Trigger: CTTACTTAAAGAGTTCTGGCAGTGTAGCATCTCTTC...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAAATGTGCCTTGGCACCTaGAGCAGCATTCACATCAAT +
Preference number: 4 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKMCLGT*SSIHIN
Trigger: ATTGATGTGAATGCTGCTGCAGGTGCCAAGGCACAT...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATATGTGCCTTGGCACCTaGAGCAGCATTCACATCAAT +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHMCLGT*SSIHIN
Trigger: ATTGATGTGAATGCTGCTGCAGGTGCCAAGGCACAT...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCGCGTCATCATCTGAATaGATTCCATATGATTCATAT +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSASSSE*IPYDSY
Trigger: ATATGAATCATATGGAATGCATTCAGATGATGACGC...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTTCTATTGAGGACTTCTaGCACATCTTCCGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFSIEDF*HIFRLP
Trigger: AGGCAGACGGAAGATGTGGCAGAAGTCCTCAATAGA...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCATTAATTGGGTAGTCTaGAGTTTGAATGATAGGACA +
Preference number: 4 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSINWVV*SLNDRT
Trigger: TGTCCTATCATTCAAACTGCAGACTACCCAATTAAT...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTCTATCACTTTTGTTTaGATTTTGATTGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: PKKLQLMTCITITQTESSSITFV*ILIAAR
Trigger: TCTGGCTGCAATCAAAATGCAAACAAAAGTGATAGA...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGAAGCTTTCCGAACACTaGTCTCTGAATTATCATAAC +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLKLSEH*SLNYHN
Trigger: GTTATGATAATTCAGAGAGCAGTGTTCGGAAAGCTT...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTAAGCTTTCCGAACACTaGTCTCTGAATTATCATAAC +
Preference number: 4 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVKLSEH*SLNYHN
Trigger: GTTATGATAATTCAGAGAGCAGTGTTCGGAAAGCTT...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTTCCAGAACCTGTTTGTaGACGTTTGATGTAAAGATT +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPSRTCL*TFDVKI
Trigger: AATCTTTACATCAAACGTGCACAAACAGGTTCTGGA...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTCCAGAACCTGTTTGTaGACGTTTGATGTAAAGATT +
Preference number: 4 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLSRTCL*TFDVKI
Trigger: AATCTTTACATCAAACGTGCACAAACAGGTTCTGGA...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGATCATAAAAGTTACATaGAGACTGAGGATAGTCCTC +
Preference number: 4 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLIIKVT*RLRIVL
Trigger: GAGGACTATCCTCAGTCTGCATGTAACTTTTATGAT...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGATCATAAAAGTTACATaGAGACTGAGGATAGTCCTC +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLIIKVT*RLRIVL
Trigger: GAGGACTATCCTCAGTCTGCATGTAACTTTTATGAT...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTATCATAAAAGTTACATaGAGACTGAGGATAGTCCTC +
Preference number: 4 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVIIKVT*RLRIVL
Trigger: GAGGACTATCCTCAGTCTGCATGTAACTTTTATGAT...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTCAGCAATCATTTTCTaGTTCCCTAAAGATATCCAT +
Preference number: 4 (lower is better)
Translates to: PKKLQLMTCITITQTESSSAIIF*FPKDIH
Trigger: ATGGATATCTTTAGGGAAGCAGAAAATGATTGCTGA...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTGCTTCCTTGCACTGTTaGCAGGATTTCCGGATGTTT +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFASLHC*QDFRMF
Trigger: AAACATCCGGAAATCCTGCCAACAGTGCAAGGAAGC...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACGCTTCTCTAACCACCTaGGATCTAAGATCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDASLTT*DLRSLA
Trigger: AGCTAAGGATCTTAGATCCCAGGTGGTTAGAGAAGC...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR CCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTAAAACTGTTGAAAGGTaGGCTACAGTAATACAAGCT +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPKTVER*ATVIQA
Trigger: AGCTTGTATTACTGTAGCCCACCTTTCAACAGTTTT...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATGACTTTCCTGTGAGCTaGATGAGGACCTGTCTGATT +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHDFPVS*MRTCLI
Trigger: AATCAGACAGGTCCTCATCCAGCTCACAGGAAAGTC...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTGACTTTCCTGTGAGCTaGATGAGGACCTGTCTGATT +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFDFPVS*MRTCLI
Trigger: AATCAGACAGGTCCTCATCCAGCTCACAGGAAAGTC...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATCTCTCACCTGACTGTTaGAGTCTCCAAACAGGATAC +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHLSPDC*SLQTGY
Trigger: GTATCCTGTTTGGAGACTCCAACAGTCAGGTGAGAG...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR CCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTTCCTTGACTCACACTTaGTCGAGGAATACGACTGCT +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFSLTHT*SRNTTA
Trigger: AGCAGTCGTATTCCTCGACCAAGTGTGAGTCAAGGA...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTTCATTCATATCTTCTTaGCTACGGAAGCTGAAATTC +
Preference number: 4 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVSFISS*LRKLKF
Trigger: GAATTTCAGCTTCCGTAGCCAAGAAGATATGAATGA...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCTCATTCATATCTTCTTaGCTACGGAAGCTGAAATTC +
Preference number: 4 (lower is better)
Translates to: SHKRSPAVVQISPALFHISFISS*LRKLKF
Trigger: GAATTTCAGCTTCCGTAGCCAAGAAGATATGAATGA...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTTCATTCATATCTTCTTaGCTACGGAAGCTGAAATTC +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPSFISS*LRKLKF
Trigger: GAATTTCAGCTTCCGTAGCCAAGAAGATATGAATGA...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGTGCAGCCAGATTAATTaGGTAGTCTGCAGTTTGAAT +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLCSQIN*VVCSLN
Trigger: ATTCAAACTGCAGACTACCCAATTAATCTGGCTGCA...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp AAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTAGTATAACTCTGCAACAATaGCAAACTGCTTCCCTAATA +
Preference number: 4 (lower is better)
Translates to: KLQLMTCITITQTESSCSITLQQ*QTASLI
Trigger: TATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTAT...ACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGATAACTCTGCAACAATaGCAAACTGCTTCCCTAATA +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLITLQQ*QTASLI
Trigger: TATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTAT...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTCTGCACATATGCTGTTaGATACAGGTTATGATGTTT +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPLHICC*IQVMMF
Trigger: AAACATCATAACCTGTATCCAACAGCATATGTGCAG...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCTGCACATATGCTGTTaGATACAGGTTATGATGTTT +
Preference number: 4 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVLHICC*IQVMMF
Trigger: AAACATCATAACCTGTATCCAACAGCATATGTGCAG...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACCCTATTTCCATCCACTaGTTCTTCATCATCGAAGCT +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDPISIH*FFIIEA
Trigger: AGCTTCGATGATGAAGAATCAGTGGATGGAAATAGG...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR TCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACGTTTCCCAAAACTGTTaGAAGGTGGGCTACAGTAAT +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDVSQNC*KVGYSN
Trigger: ATTACTGTAGCCCACCTTTCAACAGTTTTGGGAAAC...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR TCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATATCCAGAAGTTGCCATaGCTTTTGCACTATTGGGGA +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHIQKLP*LLHYWG
Trigger: TCCCCAATAGTGCAAAAGTCATGGCAACTTCTGGAT...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAAATCCAGAAGTTGCCATaGCTTTTGCACTATTGGGGA +
Preference number: 4 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKIQKLP*LLHYWG
Trigger: TCCCCAATAGTGCAAAAGTCATGGCAACTTCTGGAT...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGTCTTTCCAATGAATaGGTCTGCCACTCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHCLSNE*VCHSCN
Trigger: GTTGCAAGAGTGGCAGACTCATTCATTGGAAAGACA...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGTCAGCGTCAGCATCATaGATTCCCTTTTTAATAGTT +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLSASAS*IPFLIV
Trigger: AACTATTAAAAAGGGAATTCATGATGCTGACGCTGA...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTTCAGCGTCAGCATCATaGATTCCCTTTTTAATAGTT +
Preference number: 4 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFSASAS*IPFLIV
Trigger: AACTATTAAAAAGGGAATTCATGATGCTGACGCTGA...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTCAGCGTCAGCATCATaGATTCCCTTTTTAATAGTT +
Preference number: 4 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLSASAS*IPFLIV
Trigger: AACTATTAAAAAGGGAATTCATGATGCTGACGCTGA...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GTGGCTAGATGTGGTAGAAGTGCAGTTATGAAAATTCTACAGGCAATCATGGATGTAGAAGTGCAGTTATaGAAATTCTACAGGCAATCA +
Preference number: 4 (lower is better)
Translates to: VARCGRSAVMKILQAIMDVEVQL*KFYRQS
Trigger: TGATTGCCTGTAGAATTTTCATAACTGCACTTCTAC...ATCCATGATTGCCTGTAGAATTTTCATAACTGCACTTCTACCACATCTAGCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR TCA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAACTACCAGGCTGTGATTaGGACACCATTTTTGTTCGA +
Preference number: 4 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKLPGCD*DTIFVR
Trigger: TCGAACAAAAATGGTGTCTCAATCACAGCCTGGTAG...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCTACCAGGCTGTGATTaGGACACCATTTTTGTTCGA +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFLPGCD*DTIFVR
Trigger: TCGAACAAAAATGGTGTCTCAATCACAGCCTGGTAG...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATGCAACTAGGTCAGAATaGTCTAGGGAAAGATCGTCA +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHATRSE*SRERSS
Trigger: TGACGATCTTTCCCTAGATCATTCTGACCTAGTTGC...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTAAATCTTGCTGGTTaGTGCCTTAGGATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLLNLAG*CLRISL
Trigger: AAGAGAAATCCTAAGGCATCAACCAGCAAGATTTAA...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGCTTCCAATGTTTTCATaGCAGTCAATTCTGCATAGT +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLLPMFS*QSILHS
Trigger: ACTATGCAGAATTGACTGTCATGAAAACATTGGAAG...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTCCGAACACTGCTCTCTaGATTATCATAACCCTGTAT +
Preference number: 4 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFPNTAL*IIITLY
Trigger: ATACAGGGTTATGATAATTCAGAGAGCAGTGTTCGG...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTCCAAAGGATGTGTTTaGGAACTTCCTTTCATTGAT +
Preference number: 4 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLSKGCV*ELPFID
Trigger: ATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGA...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTCCATTTTTAAGTAGCTaGCATCTCAGTATGTTTCTG +
Preference number: 4 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLPFLSS*HLSMFL
Trigger: CAGAAACATACTGAGATGTCAGCTACTTAAAAATGG...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000650653.1
CDS-3UTR TCA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCCATTTTTAAGTAGCTaGCATCTCAGTATGTTTCTG +
Preference number: 4 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFPFLSS*HLSMFL
Trigger: CAGAAACATACTGAGATGTCAGCTACTTAAAAATGG...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000650653.1
CDS-3UTR TCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCTGAATACCTTGCCATaGGGGTCAGCAAACATTCTT +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFLNTLP*GSANIL
Trigger: AAGAATGTTTGCTGACCCTCATGGCAAGGTATTCAG...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399362.8
ENST00000468888.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAACTGAATACCTTGCCATaGGGGTCAGCAAACATTCTT +
Preference number: 4 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKLNTLP*GSANIL
Trigger: AAGAATGTTTGCTGACCCTCATGGCAAGGTATTCAG...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399362.8
ENST00000468888.6
ENST00000650653.1
CDS-3UTR GCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACAATCACAGATCCGTTTaGAAATCAGTCGCCTCATTC +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDNHRSV*KSVASF
Trigger: GAATGAGGCGACTGATTTGCAAACGGATCTGTGATT...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR GCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACAGTTGCCATGACTTTTaGACTATTGGGGACGAGATT +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDSCHDF*TIGDEI
Trigger: AATCTCGTCCCCAATAGTGCAAAAGTCATGGCAACT...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR GCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCAGCTACAATAACCATTaGTACATAGGATTTAAAGCG +
Preference number: 4 (lower is better)
Translates to: SHKRSPAVVQISPALFHISYNNH*YIGFKA
Trigger: CGCTTTAAATCCTATGTAGCAATGGTTATTGTAGCT...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTCACTATAGCCAATATTaGAGCATCTCTCACCTGACT +
Preference number: 4 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFHYSQY*SISHLT
Trigger: AGTCAGGTGAGAGATGCTGCAATATTGGCTATAGTG...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTGCGTCATCATCTGAATaGATTCCATATGATTCATAT +
Preference number: 4 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVASSSE*IPYDSY
Trigger: ATATGAATCATATGGAATGCATTCAGATGATGACGC...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATAACTCTGGGTTCCATTaGCAGTGTTTCGAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHNSGFH*QCFEGD
Trigger: ATCACCTTCGAAACACTGGCAATGGAACCCAGAGTT...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTAGCACTTTGATGCACTaGTCTGGACTAATTGAAGTG +
Preference number: 4 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFSTLMH*SGLIEV
Trigger: CACTTCAATTAGTCCAGAGCAGTGCATCAAAGTGCT...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGATTAATTGGGTAGTCTaGAGTTTGAATGATAGGACA +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLINWVV*SLNDRT
Trigger: TGTCCTATCATTCAAACTGCAGACTACCCAATTAAT...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTATTAATTGGGTAGTCTaGAGTTTGAATGATAGGACA +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPINWVV*SLNDRT
Trigger: TGTCCTATCATTCAAACTGCAGACTACCCAATTAAT...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGATTAATTGGGTAGTCTaGAGTTTGAATGATAGGACA +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLINWVV*SLNDRT
Trigger: TGTCCTATCATTCAAACTGCAGACTACCCAATTAAT...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp AAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTAGTATTAATTGGGTAGTCTaGAGTTTGAATGATAGGACA +
Preference number: 4 (lower is better)
Translates to: KLQLMTCITITQTESSCSINWVV*SLNDRT
Trigger: TGTCCTATCATTCAAACTGCAGACTACCCAATTAAT...ACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCTGTTTGCATTTTGATTaGAGCCAGATTAATTGGGTA +
Preference number: 4 (lower is better)
Translates to: SHKRSPAVVQISPALFHICLHFD*SQINWV
Trigger: TACCCAATTAATCTGGCTGCAATCAAAATGCAAACA...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGTGTTTGCATTTTGATTaGAGCCAGATTAATTGGGTA +
Preference number: 4 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLCLHFD*SQINWV
Trigger: TACCCAATTAATCTGGCTGCAATCAAAATGCAAACA...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTTGTTTGCATTTTGATTaGAGCCAGATTAATTGGGTA +
Preference number: 4 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPCLHFD*SQINWV
Trigger: TACCCAATTAATCTGGCTGCAATCAAAATGCAAACA...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACTCTATCACTTTTGTTTaGATTTTGATTGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDSITFV*ILIAAR
Trigger: TCTGGCTGCAATCAAAATGCAAACAAAAGTGATAGA...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCTATCACTTTTGTTTaGATTTTGATTGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLSITFV*ILIAAR
Trigger: TCTGGCTGCAATCAAAATGCAAACAAAAGTGATAGA...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCAAGCTTTCCGAACACTaGTCTCTGAATTATCATAAC +
Preference number: 4 (lower is better)
Translates to: QITLQQWQTASLIAICLFKLSEH*SLNYHN
Trigger: GTTATGATAATTCAGAGAGCAGTGTTCGGAAAGCTT...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAAGCTTTCCGAACACTaGTCTCTGAATTATCATAAC +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLKLSEH*SLNYHN
Trigger: GTTATGATAATTCAGAGAGCAGTGTTCGGAAAGCTT...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGTCCAGAACCTGTTTGTaGACGTTTGATGTAAAGATT +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLSRTCL*TFDVKI
Trigger: AATCTTTACATCAAACGTGCACAAACAGGTTCTGGA...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCTCCAGAACCTGTTTGTaGACGTTTGATGTAAAGATT +
Preference number: 4 (lower is better)
Translates to: QITLQQWQTASLIAICLFSRTCL*TFDVKI
Trigger: AATCTTTACATCAAACGTGCACAAACAGGTTCTGGA...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCATCATAAAAGTTACATaGAGACTGAGGATAGTCCTC +
Preference number: 4 (lower is better)
Translates to: QITLQQWQTASLIAICLFIIKVT*RLRIVL
Trigger: GAGGACTATCCTCAGTCTGCATGTAACTTTTATGAT...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGTCTCCTTGTACTGGCTaGCTGAAATTTAATCTAAGA +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLSPCTG*LKFNLR
Trigger: TCTTAGATTAAATTTCAGGCAGCCAGTACAAGGAGA...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTAGATTACTCTTTAGCTaGACATATGCTGTTGGATAC +
Preference number: 4 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFRLLFS*TYAVGY
Trigger: GTATCCAACAGCATATGTGCAGCTAAAGAGTAATCT...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp TTCAAGAATTGTTTCTTTGATCAAGACGATGATGAGAACAAGGGAAAAGGAGAAGCTTCTCTAACCACCTaGGATCTAAGATCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: FKNCFFDQDDDENKGKGEASLTT*DLRSLA
Trigger: AGCTAAGGATCTTAGATCCCAGGTGGTTAGAGAAGC...TTCTCCTTTTCCCTTGTTCTCATCATCGTCTTGATCAAAGAAACAATTCTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR CCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATGCTTCTCTAACCACCTaGGATCTAAGATCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHASLTT*DLRSLA
Trigger: AGCTAAGGATCTTAGATCCCAGGTGGTTAGAGAAGC...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCAAAACTGTTGAAAGGTaGGCTACAGTAATACAAGCT +
Preference number: 4 (lower is better)
Translates to: QITLQQWQTASLIAICLFKTVER*ATVIQA
Trigger: AGCTTGTATTACTGTAGCCCACCTTTCAACAGTTTT...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTAAAACTGTTGAAAGGTaGGCTACAGTAATACAAGCT +
Preference number: 4 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFKTVER*ATVIQA
Trigger: AGCTTGTATTACTGTAGCCCACCTTTCAACAGTTTT...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGCAGGATACACAAATGTaGTATCAATTTGCTGATGAC +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLQDTQM*YQFADD
Trigger: GTCATCAGCAAATTGATACCACATTTGTGTATCCTG...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR CCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGTCATTCATATCTTCTTaGCTACGGAAGCTGAAATTC +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLSFISS*LRKLKF
Trigger: GAATTTCAGCTTCCGTAGCCAAGAAGATATGAATGA...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGAGAATCCCTTTTCAATaGCTCATTCATATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLRIPFQ*LIHIFL
Trigger: CAAGAAGATATGAATGAGCCATTGAAAAGGGATTCT...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTAGAATCCCTTTTCAATaGCTCATTCATATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVRIPFQ*LIHIFL
Trigger: CAAGAAGATATGAATGAGCCATTGAAAAGGGATTCT...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTATAACTCTGCAACAATaGCAAACTGCTTCCCTAATA +
Preference number: 4 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLITLQQ*QTASLI
Trigger: TATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTAT...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACTCTAAGATCCTTAGCTaGAAGTTTAAGTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDSKILS*KFKCSI
Trigger: GATGGAGCACTTAAACTTTCAGCTAAGGATCTTAGA...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR TCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTGTTTCCCAAAACTGTTaGAAGGTGGGCTACAGTAAT +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFVSQNC*KVGYSN
Trigger: ATTACTGTAGCCCACCTTTCAACAGTTTTGGGAAAC...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTTCAATATCAGAGTCTaGGCTTCATCTCGAACCTTG +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHFNIRV*ASSRTL
Trigger: CAAGGTTCGAGATGAAGCTCAGACTCTGATATTGAA...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR TCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCTTGGTGTCTGGGTCTaGTCAACTGTAAATCTCATT +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFLGVWV*STVNLI
Trigger: AATGAGATTTACAGTTGATCAGACCCAGACACCAAG...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTTTATCAAGAGCTGTTTaGCTTGAGTCAGTAGCATCA +
Preference number: 4 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFLSRAV*LESVAS
Trigger: TGATGCTACTGACTCAAGTCAAACAGCTCTTGATAA...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAACCGAACACTGCTCTCTaGATTATCATAACCCTGTAT +
Preference number: 4 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKPNTAL*IIITLY
Trigger: ATACAGGGTTATGATAATTCAGAGAGCAGTGTTCGG...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATCCGAACACTGCTCTCTaGATTATCATAACCCTGTAT +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHPNTAL*IIITLY
Trigger: ATACAGGGTTATGATAATTCAGAGAGCAGTGTTCGG...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp TGTTTGCATTTTGATTGCAGCCAGATTAATTGGGTAGTCTGCAGTTTGAATGATTTACTGCCAGTAAGTTaGCTGAGATGTGGTTTTAGT +
Preference number: 4 (lower is better)
Translates to: CLHFDCSQINWVVCSLNDLLPVS*LRCGFS
Trigger: ACTAAAACCACATCTCAGTCAACTTACTGGCAGTAA...ATCATTCAAACTGCAGACTACCCAATTAATCTGGCTGCAATCAAAATGCAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR TCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTGTTGGATACAGGTTATaGTGTTTCTCCTTGTACTGG +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFVGYRL*CFSLYW
Trigger: CCAGTACAAGGAGAAACATCATAACCTGTATCCAAC...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp TCAAGAATTGTTTCTTTGATCAAGACGATGATGAGAACAAGGGAAAAGGAGAAAAGTTGCCATGACTTTTaGACTATTGGGGACGAGATT +
Preference number: 4 (lower is better)
Translates to: SRIVSLIKTMMRTREKEKSCHDF*TIGDEI
Trigger: AATCTCGTCCCCAATAGTGCAAAAGTCATGGCAACT...TTTCTCCTTTTCCCTTGTTCTCATCATCGTCTTGATCAAAGAAACAATTCTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR GCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACTGCACATCCAGAAGTTaGCATGACTTTTGCACTATT +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDCTSRS*HDFCTI
Trigger: AATAGTGCAAAAGTCATGGCAACTTCTGGATGTGCA...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR GCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACGATAAATCTGATTGCTaGACATCCAGAAGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDDKSDC*TSRSCH
Trigger: ATGGCAACTTCTGGATGTGCAGCAATCAGATTTATC...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR GCA 90 bp AATTGTTTCTTTGATCAAGACGATGATGAGAACAAGGGAAAAGGAGAAACAAGGGATAAATCTGATTGCTaGACATCCAGAAGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: NCFFDQDDDENKGKGETRDKSDC*TSRSCH
Trigger: ATGGCAACTTCTGGATGTGCAGCAATCAGATTTATC...CCTTGTTTCTCCTTTTCCCTTGTTCTCATCATCGTCTTGATCAAAGAAACAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR GCA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTGATAAATCTGATTGCTaGACATCCAGAAGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFDKSDC*TSRSCH
Trigger: ATGGCAACTTCTGGATGTGCAGCAATCAGATTTATC...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACGAAGAGATGCTACACTaGCAGAACTCTTTAAGTAAG +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDEEMLH*QNSLSK
Trigger: CTTACTTAAAGAGTTCTGGCAGTGTAGCATCTCTTC...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR GCA 90 bp TCAAGAATTGTTTCTTTGATCAAGACGATGATGAGAACAAGGGAAAAGGAGAAAATGTTTTTGCTACTCTaGATTTTCTGCCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SRIVSLIKTMMRTREKEKMFLLL*IFCQLL
Trigger: GAGGAGCTGGCAGAAAATGCAGAGTAGCAAAAACAT...TTTCTCCTTTTCCCTTGTTCTCATCATCGTCTTGATCAAAGAAACAATTCTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000333778.10
CDS-3UTR GCA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCGCGTCATCATCTGAATaGATTCCATATGATTCATAT +
Preference number: 4 (lower is better)
Translates to: QITLQQWQTASLIAICLFASSSE*IPYDSY
Trigger: ATATGAATCATATGGAATGCATTCAGATGATGACGC...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTGCCACATCTTCCGTCTaGCTCATATATGTAGGAATA +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFATSSV*LIYVGI
Trigger: TATTCCTACATATATGAGGCAGACGGAAGATGTGGC...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATGCTGAAATTCTGGATTaGTTCAGTGACACCTCTAAG +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHAEILD*FSDTSK
Trigger: CTTAGAGGTGTCACTGAAGCAATCCAGAATTTCAGC...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAAGCTGAAATTCTGGATTaGTTCAGTGACACCTCTAAG +
Preference number: 4 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKAEILD*FSDTSK
Trigger: CTTAGAGGTGTCACTGAAGCAATCCAGAATTTCAGC...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAAAGCACTTTGATGCACTaGTCTGGACTAATTGAAGTG +
Preference number: 4 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKSTLMH*SGLIEV
Trigger: CACTTCAATTAGTCCAGAGCAGTGCATCAAAGTGCT...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATAGCACTTTGATGCACTaGTCTGGACTAATTGAAGTG +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHSTLMH*SGLIEV
Trigger: CACTTCAATTAGTCCAGAGCAGTGCATCAAAGTGCT...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTATTAATTGGGTAGTCTaGAGTTTGAATGATAGGACA +
Preference number: 4 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLINWVV*SLNDRT
Trigger: TGTCCTATCATTCAAACTGCAGACTACCCAATTAAT...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGTGTTTGCATTTTGATTaGAGCCAGATTAATTGGGTA +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLCLHFD*SQINWV
Trigger: TACCCAATTAATCTGGCTGCAATCAAAATGCAAACA...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGTCTATCACTTTTGTTTaGATTTTGATTGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLSITFV*ILIAAR
Trigger: TCTGGCTGCAATCAAAATGCAAACAAAAGTGATAGA...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTTCTATCACTTTTGTTTaGATTTTGATTGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFSITFV*ILIAAR
Trigger: TCTGGCTGCAATCAAAATGCAAACAAAAGTGATAGA...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTAGGCAGATGATTTGGTaGAGCTTTCTTAAGGGATCA +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFRQMIW*SFLKGS
Trigger: TGATCCCTTAAGAAAGCTGCACCAAATCATCTGCCT...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTGCAACAATGGCAAACTaGTTCCCTAATAGCTATTTG +
Preference number: 4 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFATMAN*FPNSYL
Trigger: CAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGC...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTAGAATCCCTTTTCAATaGCTCATTCATATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFRIPFQ*LIHIFL
Trigger: CAAGAAGATATGAATGAGCCATTGAAAAGGGATTCT...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATAGATCGTCAGGAAACTaGTCAGCATCATCATCAAAC +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHRSSGN*SASSSN
Trigger: GTTTGATGATGATGCTGACCAGTTTCCTGACGATCT...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTAGATCGTCAGGAAACTaGTCAGCATCATCATCAAAC +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFRSSGN*SASSSN
Trigger: GTTTGATGATGATGCTGACCAGTTTCCTGACGATCT...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTCTACACGCTCATTATaGTTAGACAGCTCCTTCAAC +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHSTRSL*LDSSFN
Trigger: GTTGAAGGAGCTGTCTAACCATAATGAGCGTGTAGA...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTGGTTTAGGGTTTCCTTaGACACTCTCTCTATCACTT +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFGLGFP*TLSLSL
Trigger: AAGTGATAGAGAGAGTGTCCAAGGAAACCCTAAACC...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTAACAGGCAGATGATTTaGTGCAGCTTTCTTAAGGGA +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFNRQMI*CSFLKG
Trigger: TCCCTTAAGAAAGCTGCACCAAATCATCTGCCTGTT...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTTTAAAGAAAAGGTGCTaGTCACTCCCATGTCTCGAT +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFLKKRC*SLPCLD
Trigger: ATCGAGACATGGGAGTGACCAGCACCTTTTCTTTAA...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTTAAAGAAAAGGTGCTaGTCACTCCCATGTCTCGAT +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHLKKRC*SLPCLD
Trigger: ATCGAGACATGGGAGTGACCAGCACCTTTTCTTTAA...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
3UTR CAA 72 bp ATTCTACAGGCAATCATGGATTCAAGAATTGTTTCTTaGATCAAGACGATGATGAGAACAAGGGAAAAGGAG +
Preference number: 4 (lower is better)
Translates to: ILQAIMDSRIVS*IKTMMRTREKE
Trigger: CTCCTTTTCCCTTGTTCTCATCATCGTCTTGATCAAAGAAACAATTCTTGAATCCATGATTGCCTGTAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR TCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACATAAGTCTGGGTACATaGGTATGCCGAATGATAAAT +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDISLGT*VCRMIN
Trigger: ATTTATCATTCGGCATACTCATGTACCCAGACTTAT...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR TCA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTATAAGTCTGGGTACATaGGTATGCCGAATGATAAAT +
Preference number: 4 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFISLGT*VCRMIN
Trigger: ATTTATCATTCGGCATACTCATGTACCCAGACTTAT...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACTCAGCGTCAGCATCATaGATTCCCTTTTTAATAGTT +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDSASAS*IPFLIV
Trigger: AACTATTAAAAAGGGAATTCATGATGCTGACGCTGA...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR TCA 90 bp AATTGTTTCTTTGATCAAGACGATGATGAGAACAAGGGAAAAGGAGAAACAAGGGTAGAAGTGCAGTTATaGAAATTCTACAGGCAATCA +
Preference number: 4 (lower is better)
Translates to: NCFFDQDDDENKGKGETRVEVQL*KFYRQS
Trigger: TGATTGCCTGTAGAATTTTCATAACTGCACTTCTAC...CCTTGTTTCTCCTTTTCCCTTGTTCTCATCATCGTCTTGATCAAAGAAACAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR TCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTTGGTAGCACCATCCTaGAAAGTTTTTGGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHLVAPS*KVFGKA
Trigger: AGCTTTACCAAAAACTTTTCAGGATGGTGCTACCAA...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTCTTCCAATGTTTTCATaGCAGTCAATTCTGCATAGT +
Preference number: 4 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFLPMFS*QSILHS
Trigger: ACTATGCAGAATTGACTGTCATGAAAACATTGGAAG...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTTTTTACAGAACTGGCTaGTTCTGTAACATCTGTCTT +
Preference number: 4 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFFYRTG*FCNICL
Trigger: AAGACAGATGTTACAGAATCAGCCAGTTCTGTAAAA...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATAAAGGGGAAAGCCTATaGCAAATCATCCATTCAGTA +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHKGESL*QIIHSV
Trigger: TACTGAATGGATGATTTGTCATAGGCTTTCCCCTTT...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR TCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTGGTATTAGCAGATTGTaGTCCTTCATTTTTGTCAGG +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFGISRL*SFIFVR
Trigger: CCTGACAAAAATGAAGGATCACAATCTGCTAATACC...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635664.1
CDS-3UTR GCA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAAGATAAATCTGATTGCTaGACATCCAGAAGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKDKSDC*TSRSCH
Trigger: ATGGCAACTTCTGGATGTGCAGCAATCAGATTTATC...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACAATGATAAATCTGATTaGTGCACATCCAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDNDKSD*CTSRSC
Trigger: GCAACTTCTGGATGTGCAGCAATCAGATTTATCATT...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR GCA 90 bp AATTGTTTCTTTGATCAAGACGATGATGAGAACAAGGGAAAAGGAGAAACAAGGAATGATAAATCTGATTaGTGCACATCCAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: NCFFDQDDDENKGKGETRNDKSD*CTSRSC
Trigger: GCAACTTCTGGATGTGCAGCAATCAGATTTATCATT...CCTTGTTTCTCCTTTTCCCTTGTTCTCATCATCGTCTTGATCAAAGAAACAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR GCA 90 bp TTCAAGAATTGTTTCTTTGATCAAGACGATGATGAGAACAAGGGAAAAGGAGAAGAAGAGATGCTACACTaGCAGAACTCTTTAAGTAAG +
Preference number: 4 (lower is better)
Translates to: FKNCFFDQDDDENKGKGEEEMLH*QNSLSK
Trigger: CTTACTTAAAGAGTTCTGGCAGTGTAGCATCTCTTC...TTCTCCTTTTCCCTTGTTCTCATCATCGTCTTGATCAAAGAAACAATTCTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR GCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTGAAGAGATGCTACACTaGCAGAACTCTTTAAGTAAG +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFEEMLH*QNSLSK
Trigger: CTTACTTAAAGAGTTCTGGCAGTGTAGCATCTCTTC...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATGAAGAGATGCTACACTaGCAGAACTCTTTAAGTAAG +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHEEMLH*QNSLSK
Trigger: CTTACTTAAAGAGTTCTGGCAGTGTAGCATCTCTTC...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp CACCTAATGCTATTGCTCAGTTGCTTTCTCTTAGAAATACAGTCCTTACAGAACTCTATCACTTTTGTTTaGATTTTGATTGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: HLMLLLSCFLLEIQSLQNSITFV*ILIAAR
Trigger: TCTGGCTGCAATCAAAATGCAAACAAAAGTGATAGA...GTTCTGTAAGGACTGTATTTCTAAGAGAAAGCAACTGAGCAATAGCATTAGGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR GCA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAAGCAACAATGGCAAACTaGTTCCCTAATAGCTATTTG +
Preference number: 4 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKATMAN*FPNSYL
Trigger: CAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGC...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACAAAACTGTTGAAAGGTaGGCTACAGTAATACAAGCT +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDKTVER*ATVIQA
Trigger: AGCTTGTATTACTGTAGCCCACCTTTCAACAGTTTT...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR CCA 90 bp GCTAGATGTGGTAGAAGTGCAGTTATGAAAATTCTACAGGCAATCATGGATTCATATATGTTTAGGGTTTaGTTAGACAGAGTAGAGCTT +
Preference number: 4 (lower is better)
Translates to: ARCGRSAVMKILQAIMDSYMFRV*LDRVEL
Trigger: AAGCTCTACTCTGTCTAACCAAACCCTAAACATATA...TGAATCCATGATTGCCTGTAGAATTTTCATAACTGCACTTCTACCACATCTAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR TCA 90 bp TTCAAGAATTGTTTCTTTGATCAAGACGATGATGAGAACAAGGGAAAAGGAGAAATAAGTCTGGGTACATaGGTATGCCGAATGATAAAT +
Preference number: 4 (lower is better)
Translates to: FKNCFFDQDDDENKGKGEISLGT*VCRMIN
Trigger: ATTTATCATTCGGCATACTCATGTACCCAGACTTAT...TTCTCCTTTTCCCTTGTTCTCATCATCGTCTTGATCAAAGAAACAATTCTTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR TCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTTTAAATCTTGCTGGTTaGTGCCTTAGGATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFLNLAG*CLRISL
Trigger: AAGAGAAATCCTAAGGCATCAACCAGCAAGATTTAA...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATCTTCCAATGTTTTCATaGCAGTCAATTCTGCATAGT +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHLPMFS*QSILHS
Trigger: ACTATGCAGAATTGACTGTCATGAAAACATTGGAAG...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR TCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTTCCAAAGGATGTGTTTaGGAACTTCCTTTCATTGAT +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFSKGCV*ELPFID
Trigger: ATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGA...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTTCCAGAACCTGTTTGTaGACGTTTGATGTAAAGATT +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFSRTCL*TFDVKI
Trigger: AATCTTTACATCAAACGTGCACAAACAGGTTCTGGA...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTAAAACTGTTGAAAGGTaGGCTACAGTAATACAAGCT +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFKTVER*ATVIQA
Trigger: AGCTTGTATTACTGTAGCCCACCTTTCAACAGTTTT...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CCA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAAAAAACTGTTGAAAGGTaGGCTACAGTAATACAAGCT +
Preference number: 4 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKKTVER*ATVIQA
Trigger: AGCTTGTATTACTGTAGCCCACCTTTCAACAGTTTT...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
36% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACTATATGTTTAGGGTTTaGTTAGACAGAGTAGAGCTT +
Preference number: 4 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDYMFRV*LDRVEL
Trigger: AAGCTCTACTCTGTCTAACCAAACCCTAAACATATA...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR CCA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTAGAATCCCTTTTCAATaGCTCATTCATATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFRIPFQ*LIHIFL
Trigger: CAAGAAGATATGAATGAGCCATTGAAAAGGGATTCT...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATATAACTCTGCAACAATaGCAAACTGCTTCCCTAATA +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHITLQQ*QTASLI
Trigger: TATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTAT...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR GCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATAGCTACAATAACCATTaGTACATAGGATTTAAAGCG +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHSYNNH*YIGFKA
Trigger: CGCTTTAAATCCTATGTAGCAATGGTTATTGTAGCT...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR GCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATGCGTCATCATCTGAATaGATTCCATATGATTCATAT +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHASSSE*IPYDSY
Trigger: ATATGAATCATATGGAATGCATTCAGATGATGACGC...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGTTTGCATTTTGATTaGAGCCAGATTAATTGGGTA +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHCLHFD*SQINWV
Trigger: TACCCAATTAATCTGGCTGCAATCAAAATGCAAACA...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTTGTTTGCATTTTGATTaGAGCCAGATTAATTGGGTA +
Preference number: 4 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFCLHFD*SQINWV
Trigger: TACCCAATTAATCTGGCTGCAATCAAAATGCAAACA...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTCTATCACTTTTGTTTaGATTTTGATTGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHSITFV*ILIAAR
Trigger: TCTGGCTGCAATCAAAATGCAAACAAAAGTGATAGA...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR GCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTCAGCAATCATTTTCTaGTTCCCTAAAGATATCCAT +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHSAIIF*FPKDIH
Trigger: ATGGATATCTTTAGGGAAGCAGAAAATGATTGCTGA...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CCA 90 bp TCAAGAATTGTTTCTTTGATCAAGACGATGATGAGAACAAGGGAAAAGGAGAAATATATGTTTAGGGTTTaGTTAGACAGAGTAGAGCTT +
Preference number: 4 (lower is better)
Translates to: SRIVSLIKTMMRTREKEKYMFRV*LDRVEL
Trigger: AAGCTCTACTCTGTCTAACCAAACCCTAAACATATA...TTTCTCCTTTTCCCTTGTTCTCATCATCGTCTTGATCAAAGAAACAATTCTTGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR CCA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATAGAATCCCTTTTCAATaGCTCATTCATATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHRIPFQ*LIHIFL
Trigger: CAAGAAGATATGAATGAGCCATTGAAAAGGGATTCT...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS TCA 90 bp AGCCCGCTTCAGAGGCCGCGGCCGCGGGCGACGTCAGCACGCGCGTaGCGTCAGCACGACGCCGGCGAGGGCCCTCCAGTCCGGCTAGCG +
Preference number: 5 (lower is better)
Translates to: SPLQRPRPRATSARA*RQHDAGEGPPVRLA
Trigger: CGCTAGCCGGACTGGAGGGCCCTCGCCGGCGTCGTGCTGACGTCACGCGCGTGCTGACGTCGCCCGCGGCCGCGGCCTCTGAAGCGGGCT
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399362.8
CDS GCA 90 bp GGCCGCCGACGTCCTTCTGCTGCACCTGGGCGCAGAAGTACTCCATaGTGCGGGGCTCCATGGCTGCGGCCGCCCGCCCGCCTGCCAGTC +
Preference number: 5 (lower is better)
Translates to: GRRRPSAAPGRRSTP*CGAPWLRPPARLPV
Trigger: GACTGGCAGGCGGGCGGGCGGCCGCAGCCATGGAGCCCCGCAGCATGGAGTACTTCTGCGCCCAGGTGCAGCAGAAGGACGTCGGCGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000682230.1
CDS GCA 90 bp GTACTCCATGCTGCGGGGCTCCATGGCTGCGGCCGCCCGCCCGCCTaGCAGTCTGTGAGCGGCCAACTTTCGCCGAGAGCCGCCCAGCCT +
Preference number: 5 (lower is better)
Translates to: VLHAAGLHGCGRPPA*QSVSGQLSPRAAQP
Trigger: AGGCTGGGCGGCTCTCGGCGAAAGTTGGCCGCTCACAGACTGGCAGGCGGGCGGGCGGCCGCAGCCATGGAGCCCCGCAGCATGGAGTAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000682230.1
CDS GCA 90 bp CTGCACCTGGGCGCAGAAGTACTCCATGCTGCGGGGCTCCATGGCTaGGGCCGCCCGCCCGCCTGCCAGTCTGTGAGCGGCCAACTTTCG +
Preference number: 5 (lower is better)
Translates to: LHLGAEVLHAAGLHG*GRPPACQSVSGQLS
Trigger: CGAAAGTTGGCCGCTCACAGACTGGCAGGCGGGCGGGCGGCCGCAGCCATGGAGCCCCGCAGCATGGAGTACTTCTGCGCCCAGGTGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000682230.1
CDS GCA 90 bp CGTCAGCACGACGCCGGCGAGGGCCCTCCAGTCCGGCTAGCGTTTTaGTGCGGAGGTGGTGGAGGTGGCTGCGGAAACCGCTGGGAGCGA +
Preference number: 5 (lower is better)
Translates to: RQHDAGEGPPVRLAF*CGGGGGGCGNRWER
Trigger: TCGCTCCCAGCGGTTTCCGCAGCCACCTCCACCACCTCCGCAGCAAAACGCTAGCCGGACTGGAGGGCCCTCGCCGGCGTCGTGCTGACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399362.8
CDS CCA 90 bp TCTGCTGCACCTGGGCGCAGAAGTACTCCATGCTGCGGGGCTCCATaGCTGCGGCCGCCCGCCCGCCTGCCAGTCTGTGAGCGGCCAACT +
Preference number: 5 (lower is better)
Translates to: SAAPGRRSTPCCGAP*LRPPARLPVCERPT
Trigger: AGTTGGCCGCTCACAGACTGGCAGGCGGGCGGGCGGCCGCAGCCATGGAGCCCCGCAGCATGGAGTACTTCTGCGCCCAGGTGCAGCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000682230.1
CDS CCA 90 bp CGACTGTCTTGCCTAGGCGGCCCAGGTCCTCCTCCAGGTCCGAGATaGCGCCGGGGGCGCCAAGGTAGAGCAGGAGCTCCTGGCCGACCT +
Preference number: 5 (lower is better)
Translates to: RLSCLGGPGPPPGPR*RRGRQGRAGAPGRP
Trigger: AGGTCGGCCAGGAGCTCCTGCTCTACCTTGGCGCCCCCGGCGCCATCTCGGACCTGGAGGAGGACCTGGGCCGCCTAGGCAAGACAGTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000467956.1
ENST00000468888.6
ENST00000682230.1
CDS GCA 90 bp AGGAGCTCCTGGCCGACCTGCAGCCGGCCGCCGACGTCCTTCTGCTaGACCTGGGCGCAGAAGTACTCCATGCTGCGGGGCTCCATGGCT +
Preference number: 5 (lower is better)
Translates to: RSSWPTCSRPPTSFC*TWAQKYSMLRGSMA
Trigger: AGCCATGGAGCCCCGCAGCATGGAGTACTTCTGCGCCCAGGTGCAGCAGAAGGACGTCGGCGGCCGGCTGCAGGTCGGCCAGGAGCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000467956.1
ENST00000468888.6
ENST00000682230.1
CDS GCA 90 bp AGCAGGAGCTCCTGGCCGACCTGCAGCCGGCCGCCGACGTCCTTCTaGTGCACCTGGGCGCAGAAGTACTCCATGCTGCGGGGCTCCATG +
Preference number: 5 (lower is better)
Translates to: SRSSWPTCSRPPTSF*CTWAQKYSMLRGSM
Trigger: CATGGAGCCCCGCAGCATGGAGTACTTCTGCGCCCAGGTGCAGCAGAAGGACGTCGGCGGCCGGCTGCAGGTCGGCCAGGAGCTCCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000467956.1
ENST00000468888.6
ENST00000682230.1
CDS GCA 90 bp ACAGCAAATAAGTACAGCTCAGTGCCTGCGCCACTGGGCTCGGCCTaGAGCCTGCAGACACCCGGAGCACTGTGTGACCCAGGCCTCGCT +
Preference number: 5 (lower is better)
Translates to: TANKYSSVPAPLGSA*SLQTPGALCDPGLA
Trigger: AGCGAGGCCTGGGTCACACAGTGCTCCGGGTGTCTGCAGGCTGCAGGCCGAGCCCAGTGGCGCAGGCACTGAGCTGTACTTATTTGCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000480013.6
ENST00000496954.2
ENST00000650653.1
CDS TCA 90 bp ATCCCATTAATGATACCCGGTAGTTGCTCGAACCCACCCAGCCGGTaGGCGCGTCGACTGTCTTGCCTAGGCGGCCCAGGTCCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: IPLMIPGSCSNPPSR*ARRLSCLGGPGPPP
Trigger: TGGAGGAGGACCTGGGCCGCCTAGGCAAGACAGTCGACGCGCTCACCGGCTGGGTGGGTTCGAGCAACTACCGGGTATCATTAATGGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000467956.1
ENST00000468888.6
ENST00000682230.1
CDS CCA 90 bp GGTCAAATAGCACAGCAAATAAGTACAGCTCAGTGCCTGCGCCACTaGGCTCGGCCTGCAGCCTGCAGACACCCGGAGCACTGTGTGACC +
Preference number: 5 (lower is better)
Translates to: GQIAQQISTAQCLRH*ARPAACRHPEHCVT
Trigger: GGTCACACAGTGCTCCGGGTGTCTGCAGGCTGCAGGCCGAGCCCAGTGGCGCAGGCACTGAGCTGTACTTATTTGCTGTGCTATTTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000480013.6
ENST00000496954.2
ENST00000650653.1
CDS GCA 90 bp CTGAAACCAAGAGGTCAAATAGCACAGCAAATAAGTACAGCTCAGTaGCTGCGCCACTGGGCTCGGCCTGCAGCCTGCAGACACCCGGAG +
Preference number: 5 (lower is better)
Translates to: LKPRGQIAQQISTAQ*LRHWARPAACRHPE
Trigger: CTCCGGGTGTCTGCAGGCTGCAGGCCGAGCCCAGTGGCGCAGGCACTGAGCTGTACTTATTTGCTGTGCTATTTGACCTCTTGGTTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000461133.8
ENST00000480013.6
ENST00000486796.1
ENST00000496954.2
ENST00000650653.1
CDS CCA 90 bp CCAGGACTCTTTGAACACCAGAGCTCACAGTGGACAGGGCTGTTGTaGTCAGAACTCTTCCTGGAGACCCAGACCGGCTACCAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: PGLFEHQSSQWTGLL*SELFLETQTGYQAV
Trigger: CACAGCCTGGTAGCCGGTCTGGGTCTCCAGGAAGAGTTCTGACCACAACAGCCCTGTCCACTGTGAGCTCTGGTGTTCAAAGAGTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
ENST00000682230.1
CDS CCA 90 bp CCAGGACTCTTTGAACACCAGAGCTCACAGTGGACAGGGCTGTTGTaGTCAGAACTCTTCCTGGAGACCCAGACCGGCTACCAGCACCAA +
Preference number: 5 (lower is better)
Translates to: PGLFEHQSSQWTGLL*SELFLETQTGYQHQ
Trigger: TTGGTGCTGGTAGCCGGTCTGGGTCTCCAGGAAGAGTTCTGACCACAACAGCCCTGTCCACTGTGAGCTCTGGTGTTCAAAGAGTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635664.1
CDS-3UTR CAA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGAGCGCGTCGACTGTCTaGCCTAGGCGGCCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDESASTV*PRRPRS
Trigger: GGACCTGGGCCGCCTAGGCAAGACAGTCGACGCGCT...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS CCA 90 bp ACCAGAGCTCACAGTGGACAGGGCTGTTGTGGTCAGAACTCTTCCTaGAGACCCAGACCGGCTACCAGCACCAATGGTATTAGCAGATTG +
Preference number: 5 (lower is better)
Translates to: TRAHSGQGCCGQNSS*RPRPATSTNGISRL
Trigger: CAATCTGCTAATACCATTGGTGCTGGTAGCCGGTCTGGGTCTCCAGGAAGAGTTCTGACCACAACAGCCCTGTCCACTGTGAGCTCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635664.1
CDS TCA 90 bp TGTGTTCAGGACTCGCATGGCACTAACAGAAGACGACAGTCGACTTaGTTGGCTGATCCCATAACCTGGACCGAGGGGCTGAAAAGAGCG +
Preference number: 5 (lower is better)
Translates to: CVQDSHGTNRRRQST*LADPITWTEGLKRA
Trigger: CGCTCTTTTCAGCCCCTCGGTCCAGGTTATGGGATCAGCCAATCAAGTCGACTGTCGTCTTCTGTTAGTGCCATGCGAGTCCTGAACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000635664.1
ENST00000682230.1
CDS CCA 90 bp CATCAATGTCACTTCGTGAACGCTGCAGGCTTCCTGGAAGGGAACTaGCTTTGCTGCTGCCTGCTGATACTCTTCCAGCCACAGTTGATG +
Preference number: 5 (lower is better)
Translates to: HQCHFVNAAGFLEGN*LCCCLLILFQPQLM
Trigger: CATCAACTGTGGCTGGAAGAGTATCAGCAGGCAGCAGCAAAGCCAGTTCCCTTCCAGGAAGCCTGCAGCGTTCACGAAGTGACATTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000313350.10
ENST00000333778.10
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487200.5
ENST00000635664.1
ENST00000650653.1
ENST00000682230.1
CDS-3UTR CAA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGCGCGTCGACTGTCTaGCCTAGGCGGCCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLSASTV*PRRPRS
Trigger: GGACCTGGGCCGCCTAGGCAAGACAGTCGACGCGCT...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR CAA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTTTCCCGGCTGCATCCTaGACTCACACTTGGTCGAGG +
Preference number: 5 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELFPAAS*THTWSR
Trigger: CCTCGACCAAGTGTGAGTCAAGGATGCAGCCGGGAA...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS TCA 90 bp TCCTCTAGAATCTGCCTTGGCATTTCCCATGCCAGCAAGTGGTGCTaGAAGTTTTGCTCTCACCCGGCCATCTTCAGATGCTGTTCCATC +
Preference number: 5 (lower is better)
Translates to: SSRICLGISHASKWC*KFCSHPAIFRCCSI
Trigger: GATGGAACAGCATCTGAAGATGGCCGGGTGAGAGCAAAACTTTCAGCACCACTTGCTGGCATGGGAAATGCCAAGGCAGATTCTAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
ENST00000682230.1
CDS-3UTR CAA 90 bp GGAAAGTTAGATACAAGCCAATTCCCTTCCCAAACCCCCTTAGAAACCAGTGGCGGAAGGGAACTGGCTTaGCTGCTGCCTGCTGATACT +
Preference number: 5 (lower is better)
Translates to: GKLDTSQFPSQTPLETSGGRELA*LLPADT
Trigger: AGTATCAGCAGGCAGCAGCAAAGCCAGTTCCCTTCC...GCCACTGGTTTCTAAGGGGGTTTGGGAAGGGAATTGGCTTGTATCTAACTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR CAA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGGGAAGGGAACTGGCTTaGCTGCTGCCTGCTGATACT +
Preference number: 5 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDEGRELA*LLPADT
Trigger: AGTATCAGCAGGCAGCAGCAAAGCCAGTTCCCTTCC...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTTCCCGGCTGCATCCTaGACTCACACTTGGTCGAGG +
Preference number: 5 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRFPAAS*THTWSR
Trigger: CCTCGACCAAGTGTGAGTCAAGGATGCAGCCGGGAA...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGAGTCCGGCTAGCGTTTaGCTGCGGAGGTGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLSPASV*LRRWWR
Trigger: CCTCCACCACCTCCGCAGCAAAACGCTAGCCGGACT...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399362.8
CDS-3UTR CAA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGGGCTTCCTTGCACTGTaGGCAGGATTTCCGGATGTT +
Preference number: 5 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDEGFLAL*AGFPDV
Trigger: AACATCCGGAAATCCTGCCAACAGTGCAAGGAAGCC...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp TTGGTTAGACAGAGTAGAGCTTTGCAGTTCTCCCAGATCTCCAAAAGGCTTCACGGAAGGGAACTGGCTTaGCTGCTGCCTGCTGATACT +
Preference number: 5 (lower is better)
Translates to: LVRQSRALQFSQISKRLHGRELA*LLPADT
Trigger: AGTATCAGCAGGCAGCAGCAAAGCCAGTTCCCTTCC...GTGAAGCCTTTTGGAGATCTGGGAGAACTGCAAAGCTCTACTCTGTCTAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR CAA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTGTGGTGCTGAAAGTTTaGCTCTCACCCGGCCATCTT +
Preference number: 5 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELVVLKV*LSPGHL
Trigger: AAGATGGCCGGGTGAGAGCAAAACTTTCAGCACCAC...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTATCGTGGTGTTGGTCTaGTCAAAGGACTCCCCATGG +
Preference number: 5 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELIVVLV*SKDSPW
Trigger: CCATGGGGAGTCCTTTGACAAGACCAACACCACGAT...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTCTGGTGATCGTGGTGTaGGTCTTGTCAAAGGACTCC +
Preference number: 5 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELLVIVV*VLSKDS
Trigger: GGAGTCCTTTGACAAGACCAACACCACGATCACCAG...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTGGTGATCGTGGTGTaGGTCTTGTCAAAGGACTCC +
Preference number: 5 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDELVIVV*VLSKDS
Trigger: GGAGTCCTTTGACAAGACCAACACCACGATCACCAG...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS GCA 90 bp CCGCATGAACAGCCACCAGGCAGAAGACACAAGCTTTCCGAACACTaGTCTCTGAATTATCATAACCCTACGGAGAGAAGTCCACTGTTA +
Preference number: 5 (lower is better)
Translates to: PHEQPPGRRHKLSEH*SLNYHNPTERSPLL
Trigger: TAACAGTGGACTTCTCTCCGTAGGGTTATGATAATTCAGAGAGCAGTGTTCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTGTTCATGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464961.1
CDS-3UTR CAA 90 bp TTGGTTAGACAGAGTAGAGCTTTGCAGTTCTCCCAGATCTCCAAAAGGCTTCACCCATGTATGTCTTTCTaGCCTCCACTCTGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: LVRQSRALQFSQISKRLHPCMSF*PPLWPQ
Trigger: CTGAGGCCAGAGTGGAGGCAAGAAAGACATACATGG...GTGAAGCCTTTTGGAGATCTGGGAGAACTGCAAAGCTCTACTCTGTCTAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR CAA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCGGAAGGGAACTGGCTTaGCTGCTGCCTGCTGATACT +
Preference number: 5 (lower is better)
Translates to: PKKLQLMTCITITQTESSGRELA*LLPADT
Trigger: AGTATCAGCAGGCAGCAGCAAAGCCAGTTCCCTTCC...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCCCTCTAGAATCTGCCTaGGCATTTCCCATGCCAGCA +
Preference number: 5 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRPLESA*AFPMPA
Trigger: TGCTGGCATGGGAAATGCCAAGGCAGATTCTAGAGG...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTTTCCCGGCTGCATCCTaGACTCACACTTGGTCGAGG +
Preference number: 5 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVFPAAS*THTWSR
Trigger: CCTCGACCAAGTGTGAGTCAAGGATGCAGCCGGGAA...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATATCGTGGTGTTGGTCTaGTCAAAGGACTCCCCATGG +
Preference number: 5 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDIVVLV*SKDSPW
Trigger: CCATGGGGAGTCCTTTGACAAGACCAACACCACGAT...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp TGTCCAGAAACATCAGTAGTGGGATCAGCTCCTCCAGAACCTGTTTGTGCACGTTTGAGGGCAGACTTGTaGAAGGGACTGATGCTATCT +
Preference number: 5 (lower is better)
Translates to: CPETSVVGSAPPEPVCARLRADL*KGLMLS
Trigger: AGATAGCATCAGTCCCTTCAACAAGTCTGCCCTCAA...ACGTGCACAAACAGGTTCTGGAGGAGCTGATCCCACTACTGATGTTTCTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR CAA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGTCCTTGAGGGCAGACTaGTTGAAGGGACTGATGCTA +
Preference number: 5 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDESLRAD*LKGLML
Trigger: TAGCATCAGTCCCTTCAACAAGTCTGCCCTCAAGGA...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp ACCAATTACCGCATGAACAGCCACCAGGCAGAAGACACAAGCTTTCCGAACACTTCAAACATGGCTTCCTaGAGGGCAGACTTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: TNYRMNSHQAEDTSFPNTSNMAS*RADLLK
Trigger: CTTCAACAAGTCTGCCCTCAAGGAAGCCATGTTTGA...AGTGTTCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTGTTCATGCGGTAATTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS GCA 90 bp TCACTGTTAGCCCTCTATATCAGGTTCTTACTTAGTCTGGAAAGCTaGACTTCTCTGACTCTGAGGCTGCTCACTTGCCAATTCACCCTG +
Preference number: 5 (lower is better)
Translates to: SLLALYIRFLLSLES*TSLTLRLLTCQFTL
Trigger: CAGGGTGAATTGGCAAGTGAGCAGCCTCAGAGTCAGAGAAGTGCAGCTTTCCAGACTAAGTAAGAACCTGATATAGAGGGCTAACAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464961.1
CDS-3UTR CAA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATTTAGGTGCAGGAACCTaGAAGGCTGATGCAGCTGAT +
Preference number: 5 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDLGAGT*KADAAD
Trigger: ATCAGCTGCATCAGCCTTCAAGGTTCCTGCACCTAA...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCGGCTTCCTTGCACTGTaGGCAGGATTTCCGGATGTT +
Preference number: 5 (lower is better)
Translates to: PKKLQLMTCITITQTESSGFLAL*AGFPDV
Trigger: AACATCCGGAAATCCTGCCAACAGTGCAAGGAAGCC...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp AAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTAGTGGAAGGGAACTGGCTTaGCTGCTGCCTGCTGATACT +
Preference number: 5 (lower is better)
Translates to: KLQLMTCITITQTESSCSGRELA*LLPADT
Trigger: AGTATCAGCAGGCAGCAGCAAAGCCAGTTCCCTTCC...ACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGGAAGGGAACTGGCTTaGCTGCTGCCTGCTGATACT +
Preference number: 5 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLGRELA*LLPADT
Trigger: AGTATCAGCAGGCAGCAGCAAAGCCAGTTCCCTTCC...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTGCTGTTCCATCCAGCTaGTCAGAAGTATCCTCTAGT +
Preference number: 5 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELAVPSS*SEVSSS
Trigger: ACTAGAGGATACTTCTGACAAGCTGGATGGAACAGC...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGCAGTGGACAGGGCTGTaGTGGTCAGAACTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLQWTGL*WSELFL
Trigger: CAGGAAGAGTTCTGACCACAACAGCCCTGTCCACTG...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCAGTGGACAGGGCTGTaGTGGTCAGAACTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVQWTGL*WSELFL
Trigger: CAGGAAGAGTTCTGACCACAACAGCCCTGTCCACTG...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGCAGTGGACAGGGCTGTaGTGGTCAGAACTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLQWTGL*WSELFL
Trigger: CAGGAAGAGTTCTGACCACAACAGCCCTGTCCACTG...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTCCCGGCTGCATCCTaGACTCACACTTGGTCGAGG +
Preference number: 5 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLFPAAS*THTWSR
Trigger: CCTCGACCAAGTGTGAGTCAAGGATGCAGCCGGGAA...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTTTCCCGGCTGCATCCTaGACTCACACTTGGTCGAGG +
Preference number: 5 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFFPAAS*THTWSR
Trigger: CCTCGACCAAGTGTGAGTCAAGGATGCAGCCGGGAA...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTCCTTCACCTTTAAGCTaGGTGTCTGGGTCTGATCAA +
Preference number: 5 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELPSPLS*VSGSDQ
Trigger: TTGATCAGACCCAGACACCAAGCTTAAAGGTGAAGG...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCCTTCACCTTTAAGCTaGGTGTCTGGGTCTGATCAA +
Preference number: 5 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDEPSPLS*VSGSDQ
Trigger: TTGATCAGACCCAGACACCAAGCTTAAAGGTGAAGG...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGTCAAACATGGCTTCCTaGAGGGCAGACTTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDESNMAS*RADLLK
Trigger: CTTCAACAAGTCTGCCCTCAAGGAAGCCATGTTTGA...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTTCAAACATGGCTTCCTaGAGGGCAGACTTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELSNMAS*RADLLK
Trigger: CTTCAACAAGTCTGCCCTCAAGGAAGCCATGTTTGA...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp TGTCCAGAAACATCAGTAGTGGGATCAGCTCCTCCAGAACCTGTTTGTGCACGTAGGTTTAGGGTTTCCTaGGACACTCTCTCTATCACT +
Preference number: 5 (lower is better)
Translates to: CPETSVVGSAPPEPVCARRFRVS*DTLSIT
Trigger: AGTGATAGAGAGAGTGTCCAAGGAAACCCTAAACCT...ACGTGCACAAACAGGTTCTGGAGGAGCTGATCCCACTACTGATGTTTCTGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR CAA 90 bp ACTTTGATGCACTGCTCTGGACTAATTGAAGTGGCCAACACTGATGCCGCTTCCTCCTCCAGAACCTGTTaGTGCACGTTTGATGTAAAG +
Preference number: 5 (lower is better)
Translates to: TLMHCSGLIEVANTDAASSSRTC*CTFDVK
Trigger: CTTTACATCAAACGTGCACAAACAGGTTCTGGAGGA...GGAAGCGGCATCAGTGTTGGCCACTTCAATTAGTCCAGAGCAGTGCATCAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR CAA 90 bp TTGATGCACTGCTCTGGACTAATTGAAGTGGCCAACACTGATGCCGCTTCCTCATATCTGTCCTTTCTTTaGAGAGACCTGGTTCGCTGT +
Preference number: 5 (lower is better)
Translates to: LMHCSGLIEVANTDAASSYLSFL*RDLVRC
Trigger: ACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATA...TGAGGAAGCGGCATCAGTGTTGGCCACTTCAATTAGTCCAGAGCAGTGCATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS TCA 90 bp CATGGCTTCCTTGAGGGCAGACTTGTTGAAGGGACTGATGCTATCTaGATAGTTATATGGATTATAGTCTCGAGAGCGTGGAGAGGAGTG +
Preference number: 5 (lower is better)
Translates to: HGFLEGRLVEGTDAI*IVIWIIVSRAWRGV
Trigger: CACTCCTCTCCACGCTCTCGAGACTATAATCCATATAACTATTCAGATAGCATCAGTCCCTTCAACAAGTCTGCCCTCAAGGAAGCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000476251.1
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
ENST00000682230.1
CDS GCA 90 bp GTTTCCATGATTAACTGCTCTCATTATGCAGGAAGCATTTCTGGCTaGCGTAAACAAATCACGTCAAAGGCAGCCCATCAAAGGCTGCTC +
Preference number: 5 (lower is better)
Translates to: VSMINCSHYAGSISG*RKQITSKAAHQRLL
Trigger: GAGCAGCCTTTGATGGGCTGCCTTTGACGTGATTTGTTTACGGCAGCCAGAAATGCTTCCTGCATAATGAGAGCAGTTAATCATGGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482896.5
CDS GCA 90 bp CCGCATGAACAGCCACCAGGCAGAAGACACAAGCTTTCCGAACACTaGTCTCTGAATTATCATAACCCTCCTTATGAGGATCTTTATGTG +
Preference number: 5 (lower is better)
Translates to: PHEQPPGRRHKLSEH*SLNYHNPPYEDLYV
Trigger: CACATAAAGATCCTCATAAGGAGGGTTATGATAATTCAGAGAGCAGTGTTCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTGTTCATGCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487553.5
CDS-3UTR CAA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTAGGTGCAGGAACCTaGAAGGCTGATGCAGCTGAT +
Preference number: 5 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSLGAGT*KADAAD
Trigger: ATCAGCTGCATCAGCCTTCAAGGTTCCTGCACCTAA...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp TTTAGGGTTTGGTTAGACAGAGTAGAGCTTTGCAGTTCTCCCAGATCTCCAAAAGGCTTCCTTGCACTGTaGGCAGGATTTCCGGATGTT +
Preference number: 5 (lower is better)
Translates to: FRVWLDRVELCSSPRSPKGFLAL*AGFPDV
Trigger: AACATCCGGAAATCCTGCCAACAGTGCAAGGAAGCC...TTTTGGAGATCTGGGAGAACTGCAAAGCTCTACTCTGTCTAACCAAACCCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR CAA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTGGCTTCCTTGCACTGTaGGCAGGATTTCCGGATGTT +
Preference number: 5 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVGFLAL*AGFPDV
Trigger: AACATCCGGAAATCCTGCCAACAGTGCAAGGAAGCC...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGCCATGTATGTCTTTCTaGCCTCCACTCTGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLPCMSF*PPLWPQ
Trigger: CTGAGGCCAGAGTGGAGGCAAGAAAGACATACATGG...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGCCATGTATGTCTTTCTaGCCTCCACTCTGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLPCMSF*PPLWPQ
Trigger: CTGAGGCCAGAGTGGAGGCAAGAAAGACATACATGG...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTAGTCCATGTATGTCTTTCTaGCCTCCACTCTGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: KLQLMTCITITQTESSCSPCMSF*PPLWPQ
Trigger: CTGAGGCCAGAGTGGAGGCAAGAAAGACATACATGG...ACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp TTGGTTAGACAGAGTAGAGCTTTGCAGTTCTCCCAGATCTCCAAAAGGCTTCACGAAGAAAAAGGGCGATaGAGACTTTCCTGTGAGCTG +
Preference number: 5 (lower is better)
Translates to: LVRQSRALQFSQISKRLHEEKGR*RLSCEL
Trigger: CAGCTCACAGGAAAGTCTCAATCGCCCTTTTTCTTC...GTGAAGCCTTTTGGAGATCTGGGAGAACTGCAAAGCTCTACTCTGTCTAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR CAA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGGGAAGGGAACTGGCTTaGCTGCTGCCTGCTGATACT +
Preference number: 5 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLGRELA*LLPADT
Trigger: AGTATCAGCAGGCAGCAGCAAAGCCAGTTCCCTTCC...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTGGAAGGGAACTGGCTTaGCTGCTGCCTGCTGATACT +
Preference number: 5 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLGRELA*LLPADT
Trigger: AGTATCAGCAGGCAGCAGCAAAGCCAGTTCCCTTCC...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGTGGTGCTGAAAGTTTaGCTCTCACCCGGCCATCTT +
Preference number: 5 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPVVLKV*LSPGHL
Trigger: AAGATGGCCGGGTGAGAGCAAAACTTTCAGCACCAC...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCCCTCTAGAATCTGCCTaGGCATTTCCCATGCCAGCA +
Preference number: 5 (lower is better)
Translates to: SHKRSPAVVQISPALFHIPLESA*AFPMPA
Trigger: TGCTGGCATGGGAAATGCCAAGGCAGATTCTAGAGG...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGCCTCTAGAATCTGCCTaGGCATTTCCCATGCCAGCA +
Preference number: 5 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLPLESA*AFPMPA
Trigger: TGCTGGCATGGGAAATGCCAAGGCAGATTCTAGAGG...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTAGTCCTCTAGAATCTGCCTaGGCATTTCCCATGCCAGCA +
Preference number: 5 (lower is better)
Translates to: KLQLMTCITITQTESSCSPLESA*AFPMPA
Trigger: TGCTGGCATGGGAAATGCCAAGGCAGATTCTAGAGG...ACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTCAGTGGACAGGGCTGTaGTGGTCAGAACTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLQWTGL*WSELFL
Trigger: CAGGAAGAGTTCTGACCACAACAGCCCTGTCCACTG...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCAGTGGACAGGGCTGTaGTGGTCAGAACTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFQWTGL*WSELFL
Trigger: CAGGAAGAGTTCTGACCACAACAGCCCTGTCCACTG...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCATCCTTGACTCACACTaGGTCGAGGAATACGACTGC +
Preference number: 5 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSILDSH*VEEYDC
Trigger: GCAGTCGTATTCCTCGACCAAGTGTGAGTCAAGGAT...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGATCGTGGTGTTGGTCTaGTCAAAGGACTCCCCATGG +
Preference number: 5 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLIVVLV*SKDSPW
Trigger: CCATGGGGAGTCCTTTGACAAGACCAACACCACGAT...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGCTGGTGATCGTGGTGTaGGTCTTGTCAAAGGACTCC +
Preference number: 5 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLLVIVV*VLSKDS
Trigger: GGAGTCCTTTGACAAGACCAACACCACGATCACCAG...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCTGGTGATCGTGGTGTaGGTCTTGTCAAAGGACTCC +
Preference number: 5 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVLVIVV*VLSKDS
Trigger: GGAGTCCTTTGACAAGACCAACACCACGATCACCAG...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCAGGACCACCACACATaGAATCGCCATCATCTTTTT +
Preference number: 5 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDEQDHHT*NRHHLF
Trigger: AAAAAGATGATGGCGATTCAATGTGTGGTGGTCCTG...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATTTGAGGGCAGACTTGTaGAAGGGACTGATGCTATCT +
Preference number: 5 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDLRADL*KGLMLS
Trigger: AGATAGCATCAGTCCCTTCAACAAGTCTGCCCTCAA...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTCCTTGAGGGCAGACTaGTTGAAGGGACTGATGCTA +
Preference number: 5 (lower is better)
Translates to: PKKLQLMTCITITQTESSSLRAD*LKGLML
Trigger: TAGCATCAGTCCCTTCAACAAGTCTGCCCTCAAGGA...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTCCTTGAGGGCAGACTaGTTGAAGGGACTGATGCTA +
Preference number: 5 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSSLRAD*LKGLML
Trigger: TAGCATCAGTCCCTTCAACAAGTCTGCCCTCAAGGA...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGATAGGACAAAGCACTTaGATGCACTGCTCTGGACTA +
Preference number: 5 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDEIGQST*MHCSGL
Trigger: TAGTCCAGAGCAGTGCATCAAAGTGCTTTGTCCTAT...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGAGGTTTAGGGTTTCCTaGGACACTCTCTCTATCACT +
Preference number: 5 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDERFRVS*DTLSIT
Trigger: AGTGATAGAGAGAGTGTCCAAGGAAACCCTAAACCT...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTTCCTCCAGAACCTGTTaGTGCACGTTTGATGTAAAG +
Preference number: 5 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELSSRTC*CTFDVK
Trigger: CTTTACATCAAACGTGCACAAACAGGTTCTGGAGGA...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTTATCTGTCCTTTCTTTaGAGAGACCTGGTTCGCTGT +
Preference number: 5 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELYLSFL*RDLVRC
Trigger: ACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATA...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGTATCTGTCCTTTCTTTaGAGAGACCTGGTTCGCTGT +
Preference number: 5 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDEYLSFL*RDLVRC
Trigger: ACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATA...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTGAGAACTTCCTTTCATaGATGAGGGTGGTCTATCTG +
Preference number: 5 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELENFLS*MRVVYL
Trigger: CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp TTGATGCACTGCTCTGGACTAATTGAAGTGGCCAACACTGATGCCGCTTCCTCACACCACCTAATGCTATaGCTCAGTTGCTTTCTCTTA +
Preference number: 5 (lower is better)
Translates to: LMHCSGLIEVANTDAASSHHLML*LSCFLL
Trigger: TAAGAGAAAGCAACTGAGCAATAGCATTAGGTGGTG...TGAGGAAGCGGCATCAGTGTTGGCCACTTCAATTAGTCCAGAGCAGTGCATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR CAA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCGGCTTCCTTGCACTGTaGGCAGGATTTCCGGATGTT +
Preference number: 5 (lower is better)
Translates to: QITLQQWQTASLIAICLFGFLAL*AGFPDV
Trigger: AACATCCGGAAATCCTGCCAACAGTGCAAGGAAGCC...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp CCAATTCCCTTCCCAAACCCCCTTAGAAACCAGTGGCTAGATGTGGTAGAAGTGTCACGGGAACTGATTTaGATGTGCAATTGCTTGTTA +
Preference number: 5 (lower is better)
Translates to: PIPFPNPLRNQWLDVVEVSRELI*MCNCLL
Trigger: TAACAAGCAATTGCACATCAAAATCAGTTCCCGTGA...CACTTCTACCACATCTAGCCACTGGTTTCTAAGGGGGTTTGGGAAGGGAATTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR CAA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGCCATGTATGTCTTTCTaGCCTCCACTCTGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLPCMSF*PPLWPQ
Trigger: CTGAGGCCAGAGTGGAGGCAAGAAAGACATACATGG...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCGAAGAAAAAGGGCGATaGAGACTTTCCTGTGAGCTG +
Preference number: 5 (lower is better)
Translates to: PKKLQLMTCITITQTESSEEKGR*RLSCEL
Trigger: CAGCTCACAGGAAAGTCTCAATCGCCCTTTTTCTTC...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCGAAGAAAAAGGGCGATaGAGACTTTCCTGTGAGCTG +
Preference number: 5 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSEEKGR*RLSCEL
Trigger: CAGCTCACAGGAAAGTCTCAATCGCCCTTTTTCTTC...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTCCTCTAGAATCTGCCTaGGCATTTCCCATGCCAGCA +
Preference number: 5 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLPLESA*AFPMPA
Trigger: TGCTGGCATGGGAAATGCCAAGGCAGATTCTAGAGG...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTAGTATCCTTGACTCACACTaGGTCGAGGAATACGACTGC +
Preference number: 5 (lower is better)
Translates to: KLQLMTCITITQTESSCSILDSH*VEEYDC
Trigger: GCAGTCGTATTCCTCGACCAAGTGTGAGTCAAGGAT...ACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGATCCTTGACTCACACTaGGTCGAGGAATACGACTGC +
Preference number: 5 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLILDSH*VEEYDC
Trigger: GCAGTCGTATTCCTCGACCAAGTGTGAGTCAAGGAT...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGCTAGATGCATCGCTGTaGGCGTCATCATCTGAATGC +
Preference number: 5 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLLDASL*ASSSEC
Trigger: GCATTCAGATGATGACGCCAACAGCGATGCATCTAG...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCCTAGATGCATCGCTGTaGGCGTCATCATCTGAATGC +
Preference number: 5 (lower is better)
Translates to: SHKRSPAVVQISPALFHILDASL*ASSSEC
Trigger: GCATTCAGATGATGACGCCAACAGCGATGCATCTAG...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCCCTTCACCTTTAAGCTaGGTGTCTGGGTCTGATCAA +
Preference number: 5 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSPSPLS*VSGSDQ
Trigger: TTGATCAGACCCAGACACCAAGCTTAAAGGTGAAGG...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCATCGTGGTGTTGGTCTaGTCAAAGGACTCCCCATGG +
Preference number: 5 (lower is better)
Translates to: QITLQQWQTASLIAICLFIVVLV*SKDSPW
Trigger: CCATGGGGAGTCCTTTGACAAGACCAACACCACGAT...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGCTGGTGATCGTGGTGTaGGTCTTGTCAAAGGACTCC +
Preference number: 5 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLLVIVV*VLSKDS
Trigger: GGAGTCCTTTGACAAGACCAACACCACGATCACCAG...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCCAGGACCACCACACATaGAATCGCCATCATCTTTTT +
Preference number: 5 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRQDHHT*NRHHLF
Trigger: AAAAAGATGATGGCGATTCAATGTGTGGTGGTCCTG...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTTCCTTGAGGGCAGACTaGTTGAAGGGACTGATGCTA +
Preference number: 5 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVSLRAD*LKGLML
Trigger: TAGCATCAGTCCCTTCAACAAGTCTGCCCTCAAGGA...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTCAAACATGGCTTCCTaGAGGGCAGACTTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: PKKLQLMTCITITQTESSSNMAS*RADLLK
Trigger: CTTCAACAAGTCTGCCCTCAAGGAAGCCATGTTTGA...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp AACATCAGTAGTGGGATCAGCTCCTCCAGAACCTGTTTGTGCACGTTTGATGTAATAGGACAAAGCACTTaGATGCACTGCTCTGGACTA +
Preference number: 5 (lower is better)
Translates to: NISSGISSSRTCLCTFDVIGQST*MHCSGL
Trigger: TAGTCCAGAGCAGTGCATCAAAGTGCTTTGTCCTAT...TACATCAAACGTGCACAAACAGGTTCTGGAGGAGCTGATCCCACTACTGATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR CAA 90 bp AACATCAGTAGTGGGATCAGCTCCTCCAGAACCTGTTTGTGCACGTTTGATGTATGGGTAGTCTGCAGTTaGAATGATAGGACAAAGCAC +
Preference number: 5 (lower is better)
Translates to: NISSGISSSRTCLCTFDVWVVCS*NDRTKH
Trigger: GTGCTTTGTCCTATCATTCAAACTGCAGACTACCCA...TACATCAAACGTGCACAAACAGGTTCTGGAGGAGCTGATCCCACTACTGATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR CAA 90 bp TTGATGCACTGCTCTGGACTAATTGAAGTGGCCAACACTGATGCCGCTTCCTCAAAAGTAGAACTCCATTaGATCCAGCAATCCCACTAT +
Preference number: 5 (lower is better)
Translates to: LMHCSGLIEVANTDAASSKVELH*IQQSHY
Trigger: ATAGTGGGATTGCTGGATCAAATGGAGTTCTACTTT...TGAGGAAGCGGCATCAGTGTTGGCCACTTCAATTAGTCCAGAGCAGTGCATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS TCA 90 bp ACGCACTGTCCCTTCCCAGAACAGTTAGGGAATCGCATGGCAGAATaGGGTATTATGGGCAAGGAGTGGAATAGGAATGTAATATTTATG +
Preference number: 5 (lower is better)
Translates to: THCPFPEQLGNRMAE*GIMGKEWNRNVIFM
Trigger: CATAAATATTACATTCCTATTCCACTCCTTGCCCATAATACCTCATTCTGCCATGCGATTCCCTAACTGTTCTGGGAAGGGACAGTGCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464961.1
CDS-3UTR CAA 90 bp AAGAAAACAGGAAAGTTAGATACAAGCCAATTCCCTTCCCAAACCCCCTTAGAATTAGGTGCAGGAACCTaGAAGGCTGATGCAGCTGAT +
Preference number: 5 (lower is better)
Translates to: KKTGKLDTSQFPSQTPLELGAGT*KADAAD
Trigger: ATCAGCTGCATCAGCCTTCAAGGTTCCTGCACCTAA...TTCTAAGGGGGTTTGGGAAGGGAATTGGCTTGTATCTAACTTTCCTGTTTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR CAA 90 bp ATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGTCACGGGAACTGATTTaGATGTGCAATTGCTTGTTA +
Preference number: 5 (lower is better)
Translates to: MRVVYLSFLLRDLVRCDESRELI*MCNCLL
Trigger: TAACAAGCAATTGCACATCAAAATCAGTTCCCGTGA...CTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTGAAGAAAAAGGGCGATaGAGACTTTCCTGTGAGCTG +
Preference number: 5 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVEEKGR*RLSCEL
Trigger: CAGCTCACAGGAAAGTCTCAATCGCCCTTTTTCTTC...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACGAAGAAAAAGGGCGATaGAGACTTTCCTGTGAGCTG +
Preference number: 5 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDEEKGR*RLSCEL
Trigger: CAGCTCACAGGAAAGTCTCAATCGCCCTTTTTCTTC...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACGGAAGGGAACTGGCTTaGCTGCTGCCTGCTGATACT +
Preference number: 5 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDGRELA*LLPADT
Trigger: AGTATCAGCAGGCAGCAGCAAAGCCAGTTCCCTTCC...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR CAA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTTCTCGAACCTTGTCTTaGGCATCTCCCATTCTGTCT +
Preference number: 5 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPSRTLS*ASPILS
Trigger: AGACAGAATGGGAGATGCCAAAGACAAGGTTCGAGA...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR CAA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACGCTTCATCTCGAACCTaGTCTTTGGCATCTCCCATT +
Preference number: 5 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDASSRT*SLASPI
Trigger: AATGGGAGATGCCAAAGACAAGGTTCGAGATGAAGC...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR CAA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTGCTTCATCTCGAACCTaGTCTTTGGCATCTCCCATT +
Preference number: 5 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVASSRT*SLASPI
Trigger: AATGGGAGATGCCAAAGACAAGGTTCGAGATGAAGC...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR CAA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGGCTGTTCCATCCAGCTaGTCAGAAGTATCCTCTAGT +
Preference number: 5 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLAVPSS*SEVSSS
Trigger: ACTAGAGGATACTTCTGACAAGCTGGATGGAACAGC...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGGCTGTTCCATCCAGCTaGTCAGAAGTATCCTCTAGT +
Preference number: 5 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLAVPSS*SEVSSS
Trigger: ACTAGAGGATACTTCTGACAAGCTGGATGGAACAGC...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGCTGTTCCATCCAGCTaGTCAGAAGTATCCTCTAGT +
Preference number: 5 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPAVPSS*SEVSSS
Trigger: ACTAGAGGATACTTCTGACAAGCTGGATGGAACAGC...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTCAGTGGACAGGGCTGTaGTGGTCAGAACTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFQWTGL*WSELFL
Trigger: CAGGAAGAGTTCTGACCACAACAGCCCTGTCCACTG...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGATCCTTGACTCACACTaGGTCGAGGAATACGACTGC +
Preference number: 5 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLILDSH*VEEYDC
Trigger: GCAGTCGTATTCCTCGACCAAGTGTGAGTCAAGGAT...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCATCCTTGACTCACACTaGGTCGAGGAATACGACTGC +
Preference number: 5 (lower is better)
Translates to: QITLQQWQTASLIAICLFILDSH*VEEYDC
Trigger: GCAGTCGTATTCCTCGACCAAGTGTGAGTCAAGGAT...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTTCCCGGCTGCATCCTaGACTCACACTTGGTCGAGG +
Preference number: 5 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHFPAAS*THTWSR
Trigger: CCTCGACCAAGTGTGAGTCAAGGATGCAGCCGGGAA...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTTTCCCGGCTGCATCCTaGACTCACACTTGGTCGAGG +
Preference number: 5 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFFPAAS*THTWSR
Trigger: CCTCGACCAAGTGTGAGTCAAGGATGCAGCCGGGAA...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCCTAGATGCATCGCTGTaGGCGTCATCATCTGAATGC +
Preference number: 5 (lower is better)
Translates to: QITLQQWQTASLIAICLFLDASL*ASSSEC
Trigger: GCATTCAGATGATGACGCCAACAGCGATGCATCTAG...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGCTAGATGCATCGCTGTaGGCGTCATCATCTGAATGC +
Preference number: 5 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLLDASL*ASSSEC
Trigger: GCATTCAGATGATGACGCCAACAGCGATGCATCTAG...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTTGAGGGCAGACTTGTaGAAGGGACTGATGCTATCT +
Preference number: 5 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLLRADL*KGLMLS
Trigger: AGATAGCATCAGTCCCTTCAACAAGTCTGCCCTCAA...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp AAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTAGTTTGAGGGCAGACTTGTaGAAGGGACTGATGCTATCT +
Preference number: 5 (lower is better)
Translates to: KLQLMTCITITQTESSCSLRADL*KGLMLS
Trigger: AGATAGCATCAGTCCCTTCAACAAGTCTGCCCTCAA...ACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTCCTTGAGGGCAGACTaGTTGAAGGGACTGATGCTA +
Preference number: 5 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLSLRAD*LKGLML
Trigger: TAGCATCAGTCCCTTCAACAAGTCTGCCCTCAAGGA...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGTCAAACATGGCTTCCTaGAGGGCAGACTTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLSNMAS*RADLLK
Trigger: CTTCAACAAGTCTGCCCTCAAGGAAGCCATGTTTGA...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCTCAAACATGGCTTCCTaGAGGGCAGACTTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: SHKRSPAVVQISPALFHISNMAS*RADLLK
Trigger: CTTCAACAAGTCTGCCCTCAAGGAAGCCATGTTTGA...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCATAGGACAAAGCACTTaGATGCACTGCTCTGGACTA +
Preference number: 5 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSIGQST*MHCSGL
Trigger: TAGTCCAGAGCAGTGCATCAAAGTGCTTTGTCCTAT...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCAGGTTTAGGGTTTCCTaGGACACTCTCTCTATCACT +
Preference number: 5 (lower is better)
Translates to: PKKLQLMTCITITQTESSRFRVS*DTLSIT
Trigger: AGTGATAGAGAGAGTGTCCAAGGAAACCCTAAACCT...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTCCTCCAGAACCTGTTaGTGCACGTTTGATGTAAAG +
Preference number: 5 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSSSRTC*CTFDVK
Trigger: CTTTACATCAAACGTGCACAAACAGGTTCTGGAGGA...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTATCTGTCCTTTCTTTaGAGAGACCTGGTTCGCTGT +
Preference number: 5 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSYLSFL*RDLVRC
Trigger: ACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATA...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCGAGAACTTCCTTTCATaGATGAGGGTGGTCTATCTG +
Preference number: 5 (lower is better)
Translates to: PKKLQLMTCITITQTESSENFLS*MRVVYL
Trigger: CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTATACAAAGACAGCCTaGGCACCATCTTCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: PKKLQLMTCITITQTESSYTKTA*APSSLS
Trigger: TGAGAGAGAAGATGGTGCCAAGGCTGTCTTTGTATA...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp AGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATGAGCTTTGTAGCTATATACCTTaGATTGTGGTAGCTACACCT +
Preference number: 5 (lower is better)
Translates to: RVVYLSFLLRDLVRCDELCSYIP*IVVATP
Trigger: AGGTGTAGCTACCACAATCAAAGGTATATAGCTACA...AAGCTCATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000650653.1
CDS-3UTR CAA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATCCTTCATTTTaGTCAGGTGATGATGAACGC +
Preference number: 5 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRCDPSF*SGDDER
Trigger: GCGTTCATCATCACCTGACAAAAATGAAGGATCACA...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635664.1
CDS-3UTR CAA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACGGCTTCCTTGCACTGTaGGCAGGATTTCCGGATGTT +
Preference number: 5 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDGFLAL*AGFPDV
Trigger: AACATCCGGAAATCCTGCCAACAGTGCAAGGAAGCC...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR CAA 90 bp GGATTCAAGAATTGTTTCTTTGATCAAGACGATGATGAGAACAAGGGAAAAGGAGGCTTCCTTGCACTGTaGGCAGGATTTCCGGATGTT +
Preference number: 5 (lower is better)
Translates to: GFKNCFFDQDDDENKGKGGFLAL*AGFPDV
Trigger: AACATCCGGAAATCCTGCCAACAGTGCAAGGAAGCC...TCCTTTTCCCTTGTTCTCATCATCGTCTTGATCAAAGAAACAATTCTTGAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR CAA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACCCATGTATGTCTTTCTaGCCTCCACTCTGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDPCMSF*PPLWPQ
Trigger: CTGAGGCCAGAGTGGAGGCAAGAAAGACATACATGG...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR CAA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTCCATGTATGTCTTTCTaGCCTCCACTCTGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFPCMSF*PPLWPQ
Trigger: CTGAGGCCAGAGTGGAGGCAAGAAAGACATACATGG...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp GGATTCAAGAATTGTTTCTTTGATCAAGACGATGATGAGAACAAGGGAAAAGGACCATGTATGTCTTTCTaGCCTCCACTCTGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: GFKNCFFDQDDDENKGKGPCMSF*PPLWPQ
Trigger: CTGAGGCCAGAGTGGAGGCAAGAAAGACATACATGG...TCCTTTTCCCTTGTTCTCATCATCGTCTTGATCAAAGAAACAATTCTTGAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR CAA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCGAAGAAAAAGGGCGATaGAGACTTTCCTGTGAGCTG +
Preference number: 5 (lower is better)
Translates to: QITLQQWQTASLIAICLFEEKGR*RLSCEL
Trigger: CAGCTCACAGGAAAGTCTCAATCGCCCTTTTTCTTC...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp AAGAAAACAGGAAAGTTAGATACAAGCCAATTCCCTTCCCAAACCCCCTTAGAAGAAGAAAAAGGGCGATaGAGACTTTCCTGTGAGCTG +
Preference number: 5 (lower is better)
Translates to: KKTGKLDTSQFPSQTPLEEEKGR*RLSCEL
Trigger: CAGCTCACAGGAAAGTCTCAATCGCCCTTTTTCTTC...TTCTAAGGGGGTTTGGGAAGGGAATTGGCTTGTATCTAACTTTCCTGTTTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR CAA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATGGAAGGGAACTGGCTTaGCTGCTGCCTGCTGATACT +
Preference number: 5 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHGRELA*LLPADT
Trigger: AGTATCAGCAGGCAGCAGCAAAGCCAGTTCCCTTCC...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTCTCGAACCTTGTCTTaGGCATCTCCCATTCTGTCT +
Preference number: 5 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLSRTLS*ASPILS
Trigger: AGACAGAATGGGAGATGCCAAAGACAAGGTTCGAGA...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR CAA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTTCTCGAACCTTGTCTTaGGCATCTCCCATTCTGTCT +
Preference number: 5 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFSRTLS*ASPILS
Trigger: AGACAGAATGGGAGATGCCAAAGACAAGGTTCGAGA...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR CAA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTGCTTCATCTCGAACCTaGTCTTTGGCATCTCCCATT +
Preference number: 5 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFASSRT*SLASPI
Trigger: AATGGGAGATGCCAAAGACAAGGTTCGAGATGAAGC...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR CAA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGGCTGTTCCATCCAGCTaGTCAGAAGTATCCTCTAGT +
Preference number: 5 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLAVPSS*SEVSSS
Trigger: ACTAGAGGATACTTCTGACAAGCTGGATGGAACAGC...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTGTGGTGCTGAAAGTTTaGCTCTCACCCGGCCATCTT +
Preference number: 5 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFVVLKV*LSPGHL
Trigger: AAGATGGCCGGGTGAGAGCAAAACTTTCAGCACCAC...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTCCTCTAGAATCTGCCTaGGCATTTCCCATGCCAGCA +
Preference number: 5 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFPLESA*AFPMPA
Trigger: TGCTGGCATGGGAAATGCCAAGGCAGATTCTAGAGG...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCAGTGGACAGGGCTGTaGTGGTCAGAACTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFQWTGL*WSELFL
Trigger: CAGGAAGAGTTCTGACCACAACAGCCCTGTCCACTG...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCCCTTCACCTTTAAGCTaGGTGTCTGGGTCTGATCAA +
Preference number: 5 (lower is better)
Translates to: QITLQQWQTASLIAICLFPSPLS*VSGSDQ
Trigger: TTGATCAGACCCAGACACCAAGCTTAAAGGTGAAGG...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGCCTTCACCTTTAAGCTaGGTGTCTGGGTCTGATCAA +
Preference number: 5 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLPSPLS*VSGSDQ
Trigger: TTGATCAGACCCAGACACCAAGCTTAAAGGTGAAGG...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCCTCATTCATATCTTCTaGGCTACGGAAGCTGAAATT +
Preference number: 5 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRLIHIF*ATEAEI
Trigger: AATTTCAGCTTCCGTAGCCAAGAAGATATGAATGAG...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCAGGACCACCACACATaGAATCGCCATCATCTTTTT +
Preference number: 5 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDQDHHT*NRHHLF
Trigger: AAAAAGATGATGGCGATTCAATGTGTGGTGGTCCTG...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCTTGAGGGCAGACTTGTaGAAGGGACTGATGCTATCT +
Preference number: 5 (lower is better)
Translates to: QITLQQWQTASLIAICLFLRADL*KGLMLS
Trigger: AGATAGCATCAGTCCCTTCAACAAGTCTGCCCTCAA...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGTCAAACATGGCTTCCTaGAGGGCAGACTTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLSNMAS*RADLLK
Trigger: CTTCAACAAGTCTGCCCTCAAGGAAGCCATGTTTGA...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGATAGGACAAAGCACTTaGATGCACTGCTCTGGACTA +
Preference number: 5 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLIGQST*MHCSGL
Trigger: TAGTCCAGAGCAGTGCATCAAAGTGCTTTGTCCTAT...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACATAGGACAAAGCACTTaGATGCACTGCTCTGGACTA +
Preference number: 5 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDIGQST*MHCSGL
Trigger: TAGTCCAGAGCAGTGCATCAAAGTGCTTTGTCCTAT...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCTGGGTAGTCTGCAGTTaGAATGATAGGACAAAGCAC +
Preference number: 5 (lower is better)
Translates to: SHKRSPAVVQISPALFHIWVVCS*NDRTKH
Trigger: GTGCTTTGTCCTATCATTCAAACTGCAGACTACCCA...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTTGGGTAGTCTGCAGTTaGAATGATAGGACAAAGCAC +
Preference number: 5 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPWVVCS*NDRTKH
Trigger: GTGCTTTGTCCTATCATTCAAACTGCAGACTACCCA...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTTGGGTAGTCTGCAGTTaGAATGATAGGACAAAGCAC +
Preference number: 5 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVWVVCS*NDRTKH
Trigger: GTGCTTTGTCCTATCATTCAAACTGCAGACTACCCA...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCCTCTATCACTTTTGTTaGCATTTTGATTGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRLYHFC*HFDCSQ
Trigger: CTGGCTGCAATCAAAATGCAAACAAAAGTGATAGAG...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATCTCTATCACTTTTGTTaGCATTTTGATTGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDLYHFC*HFDCSQ
Trigger: CTGGCTGCAATCAAAATGCAAACAAAAGTGATAGAG...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AGTGGGATCAGCTCCTCCAGAACCTGTTTGTGCACGTTTGATGTAAAGATTCAGCTCTATCACTTTTGTTaGCATTTTGATTGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: SGISSSRTCLCTFDVKIQLYHFC*HFDCSQ
Trigger: CTGGCTGCAATCAAAATGCAAACAAAAGTGATAGAG...CTGAATCTTTACATCAAACGTGCACAAACAGGTTCTGGAGGAGCTGATCCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR CAA 90 bp AAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTAGTAGGTTTAGGGTTTCCTaGGACACTCTCTCTATCACT +
Preference number: 5 (lower is better)
Translates to: KLQLMTCITITQTESSCSRFRVS*DTLSIT
Trigger: AGTGATAGAGAGAGTGTCCAAGGAAACCCTAAACCT...ACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGAGGTTTAGGGTTTCCTaGGACACTCTCTCTATCACT +
Preference number: 5 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLRFRVS*DTLSIT
Trigger: AGTGATAGAGAGAGTGTCCAAGGAAACCCTAAACCT...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTTCCTCCAGAACCTGTTaGTGCACGTTTGATGTAAAG +
Preference number: 5 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVSSRTC*CTFDVK
Trigger: CTTTACATCAAACGTGCACAAACAGGTTCTGGAGGA...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTATCTGTCCTTTCTTTaGAGAGACCTGGTTCGCTGT +
Preference number: 5 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLYLSFL*RDLVRC
Trigger: ACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATA...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTAGTTATCTGTCCTTTCTTTaGAGAGACCTGGTTCGCTGT +
Preference number: 5 (lower is better)
Translates to: KLQLMTCITITQTESSCSYLSFL*RDLVRC
Trigger: ACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATA...ACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACGAGAACTTCCTTTCATaGATGAGGGTGGTCTATCTG +
Preference number: 5 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDENFLS*MRVVYL
Trigger: CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGAGAACTTCCTTTCATaGATGAGGGTGGTCTATCTG +
Preference number: 5 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLENFLS*MRVVYL
Trigger: CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTAGTTATACAAAGACAGCCTaGGCACCATCTTCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: KLQLMTCITITQTESSCSYTKTA*APSSLS
Trigger: TGAGAGAGAAGATGGTGCCAAGGCTGTCTTTGTATA...ACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCTATACAAAGACAGCCTaGGCACCATCTTCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: SHKRSPAVVQISPALFHIYTKTA*APSSLS
Trigger: TGAGAGAGAAGATGGTGCCAAGGCTGTCTTTGTATA...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp TTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTTATACAAAGACAGCCTaGGCACCATCTTCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: FLSLMRVVYLSFLLRDLVYTKTA*APSSLS
Trigger: TGAGAGAGAAGATGGTGCCAAGGCTGTCTTTGTATA...AACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTAGCTATATACCTTaGATTGTGGTAGCTACACCT +
Preference number: 5 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRCSYIP*IVVATP
Trigger: AGGTGTAGCTACCACAATCAAAGGTATATAGCTACA...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000650653.1
CDS-3UTR CAA 90 bp TTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCTGTGATAGTCACTCTACTTGGTaGTCAACAGTAGTTAAAGCA +
Preference number: 5 (lower is better)
Translates to: LMRVVYLSFLLRDLVRCDSHSTW*STVVKA
Trigger: TGCTTTAACTACTGTTGACAACCAAGTAGAGTGACT...ATCACAGCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000650653.1
CDS-3UTR CAA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACTTAGGTGCAGGAACCTaGAAGGCTGATGCAGCTGAT +
Preference number: 5 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDLGAGT*KADAAD
Trigger: ATCAGCTGCATCAGCCTTCAAGGTTCCTGCACCTAA...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR CAA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAAGGCTTCCTTGCACTGTaGGCAGGATTTCCGGATGTT +
Preference number: 5 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKGFLAL*AGFPDV
Trigger: AACATCCGGAAATCCTGCCAACAGTGCAAGGAAGCC...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTCACGGGAACTGATTTaGATGTGCAATTGCTTGTTA +
Preference number: 5 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSSRELI*MCNCLL
Trigger: TAACAAGCAATTGCACATCAAAATCAGTTCCCGTGA...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTCACGGGAACTGATTTaGATGTGCAATTGCTTGTTA +
Preference number: 5 (lower is better)
Translates to: PKKLQLMTCITITQTESSSRELI*MCNCLL
Trigger: TAACAAGCAATTGCACATCAAAATCAGTTCCCGTGA...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCCATGTATGTCTTTCTaGCCTCCACTCTGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFPCMSF*PPLWPQ
Trigger: CTGAGGCCAGAGTGGAGGCAAGAAAGACATACATGG...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATCCATGTATGTCTTTCTaGCCTCCACTCTGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHPCMSF*PPLWPQ
Trigger: CTGAGGCCAGAGTGGAGGCAAGAAAGACATACATGG...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAAGTTAGATACAAGCCAATTCCCTTCCCAAACCCCCTTAGAAACCAGTGGCTATTAAGGTATATGAACTaGTCTTCACAGAGATCAGGG +
Preference number: 5 (lower is better)
Translates to: KVRYKPIPFPNPLRNQWLLRYMN*SSQRSG
Trigger: CCCTGATCTCTGTGAAGACAAGTTCATATACCTTAA...TAGCCACTGGTTTCTAAGGGGGTTTGGGAAGGGAATTGGCTTGTATCTAACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR CAA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCCGAGATCGAAAATTCTaGTGTTTAAAACCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSRDRKF*CLKPEA
Trigger: GGCTTCTGGTTTTAAACACAAGAATTTTCGATCTCG...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR CAA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTGTGGTGCTGAAAGTTTaGCTCTCACCCGGCCATCTT +
Preference number: 5 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFVVLKV*LSPGHL
Trigger: AAGATGGCCGGGTGAGAGCAAAACTTTCAGCACCAC...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATCCTCTAGAATCTGCCTaGGCATTTCCCATGCCAGCA +
Preference number: 5 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHPLESA*AFPMPA
Trigger: TGCTGGCATGGGAAATGCCAAGGCAGATTCTAGAGG...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAAATCGTGGTGTTGGTCTaGTCAAAGGACTCCCCATGG +
Preference number: 5 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKIVVLV*SKDSPW
Trigger: CCATGGGGAGTCCTTTGACAAGACCAACACCACGAT...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAACTGGTGATCGTGGTGTaGGTCTTGTCAAAGGACTCC +
Preference number: 5 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKLVIVV*VLSKDS
Trigger: GGAGTCCTTTGACAAGACCAACACCACGATCACCAG...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCCTCATTCATATCTTCTaGGCTACGGAAGCTGAAATT +
Preference number: 5 (lower is better)
Translates to: PKKLQLMTCITITQTESSLIHIF*ATEAEI
Trigger: AATTTCAGCTTCCGTAGCCAAGAAGATATGAATGAG...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp CCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCCTCATTCATATCTTCTaGGCTACGGAAGCTGAAATT +
Preference number: 5 (lower is better)
Translates to: PKDVFENFLSLMRVVYLSLIHIF*ATEAEI
Trigger: AATTTCAGCTTCCGTAGCCAAGAAGATATGAATGAG...GGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp TGTTTGCATTTTGATTGCAGCCAGATTAATTGGGTAGTCTGCAGTTTGAATGATTCCTTGAGGGCAGACTaGTTGAAGGGACTGATGCTA +
Preference number: 5 (lower is better)
Translates to: CLHFDCSQINWVVCSLNDSLRAD*LKGLML
Trigger: TAGCATCAGTCCCTTCAACAAGTCTGCCCTCAAGGA...ATCATTCAAACTGCAGACTACCCAATTAATCTGGCTGCAATCAAAATGCAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR CAA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCATAGGACAAAGCACTTaGATGCACTGCTCTGGACTA +
Preference number: 5 (lower is better)
Translates to: QITLQQWQTASLIAICLFIGQST*MHCSGL
Trigger: TAGTCCAGAGCAGTGCATCAAAGTGCTTTGTCCTAT...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCTGGGTAGTCTGCAGTTaGAATGATAGGACAAAGCAC +
Preference number: 5 (lower is better)
Translates to: QITLQQWQTASLIAICLFWVVCS*NDRTKH
Trigger: GTGCTTTGTCCTATCATTCAAACTGCAGACTACCCA...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGTGGGTAGTCTGCAGTTaGAATGATAGGACAAAGCAC +
Preference number: 5 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLWVVCS*NDRTKH
Trigger: GTGCTTTGTCCTATCATTCAAACTGCAGACTACCCA...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CCAAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCCTCTATCACTTTTGTTaGCATTTTGATTGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: PKKLQLMTCITITQTESSLYHFC*HFDCSQ
Trigger: CTGGCTGCAATCAAAATGCAAACAAAAGTGATAGAG...GCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTAGGTTTAGGGTTTCCTaGGACACTCTCTCTATCACT +
Preference number: 5 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLRFRVS*DTLSIT
Trigger: AGTGATAGAGAGAGTGTCCAAGGAAACCCTAAACCT...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGTCCTCCAGAACCTGTTaGTGCACGTTTGATGTAAAG +
Preference number: 5 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLSSRTC*CTFDVK
Trigger: CTTTACATCAAACGTGCACAAACAGGTTCTGGAGGA...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTCCTCCAGAACCTGTTaGTGCACGTTTGATGTAAAG +
Preference number: 5 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLSSRTC*CTFDVK
Trigger: CTTTACATCAAACGTGCACAAACAGGTTCTGGAGGA...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTTCCTCCAGAACCTGTTaGTGCACGTTTGATGTAAAG +
Preference number: 5 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFSSRTC*CTFDVK
Trigger: CTTTACATCAAACGTGCACAAACAGGTTCTGGAGGA...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGGAGAACTTCCTTTCATaGATGAGGGTGGTCTATCTG +
Preference number: 5 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLENFLS*MRVVYL
Trigger: CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTTCGCATAAAACTGAGTGACTaGTTACACAGTGAGACAGAA +
Preference number: 5 (lower is better)
Translates to: LSLMRVVYLSFLLRDLVRIKLSD*LHSETE
Trigger: TTCTGTCTCACTGTGTAACAAGTCACTCAGTTTTAT...GCGAACCAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000650653.1
CDS TCA 90 bp GTCTTGCTGAAAACCCTCGTTTATTTAGCACAGCCTAGAAGGACTTaGTTAAGATTACTCTTTAGCTGCACATATGCTGTTGGATACAGG +
Preference number: 5 (lower is better)
Translates to: VLLKTLVYLAQPRRT*LRLLFSCTYAVGYR
Trigger: CCTGTATCCAACAGCATATGTGCAGCTAAAGAGTAATCTTAATCAAGTCCTTCTAGGCTGTGCTAAATAAACGAGGGTTTTCAGCAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTTTAGGTGCAGGAACCTaGAAGGCTGATGCAGCTGAT +
Preference number: 5 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFLGAGT*KADAAD
Trigger: ATCAGCTGCATCAGCCTTCAAGGTTCCTGCACCTAA...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGTCACGGGAACTGATTTaGATGTGCAATTGCTTGTTA +
Preference number: 5 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLSRELI*MCNCLL
Trigger: TAACAAGCAATTGCACATCAAAATCAGTTCCCGTGA...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCACGGGAACTGATTTaGATGTGCAATTGCTTGTTA +
Preference number: 5 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLSRELI*MCNCLL
Trigger: TAACAAGCAATTGCACATCAAAATCAGTTCCCGTGA...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACGAAGAAAAAGGGCGATaGAGACTTTCCTGTGAGCTG +
Preference number: 5 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDEEKGR*RLSCEL
Trigger: CAGCTCACAGGAAAGTCTCAATCGCCCTTTTTCTTC...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR CAA 90 bp AAAGAAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGCGAGATCGAAAATTCTaGTGTTTAAAACCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: KEVATNDMYHHHTNGVQLRDRKF*CLKPEA
Trigger: GGCTTCTGGTTTTAAACACAAGAATTTTCGATCTCG...CAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR CAA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCGAGATCGAAAATTCTaGTGTTTAAAACCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDRDRKF*CLKPEA
Trigger: GGCTTCTGGTTTTAAACACAAGAATTTTCGATCTCG...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
CDS-3UTR CAA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTATCCTTGACTCACACTaGGTCGAGGAATACGACTGC +
Preference number: 5 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFILDSH*VEEYDC
Trigger: GCAGTCGTATTCCTCGACCAAGTGTGAGTCAAGGAT...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATCTAGATGCATCGCTGTaGGCGTCATCATCTGAATGC +
Preference number: 5 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHLDASL*ASSSEC
Trigger: GCATTCAGATGATGACGCCAACAGCGATGCATCTAG...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCTAGATGCATCGCTGTaGGCGTCATCATCTGAATGC +
Preference number: 5 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFLDASL*ASSSEC
Trigger: GCATTCAGATGATGACGCCAACAGCGATGCATCTAG...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGGTATTCTGTGATGTATaGGTAGGAGAAGTAAGAGGA +
Preference number: 5 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLVFCDV*VGEVRG
Trigger: TCCTCTTACTTCTCCTACCAATACATCACAGAATAC...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGGTATTCTGTGATGTATaGGTAGGAGAAGTAAGAGGA +
Preference number: 5 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLVFCDV*VGEVRG
Trigger: TCCTCTTACTTCTCCTACCAATACATCACAGAATAC...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACGTATTCTGTGATGTATaGGTAGGAGAAGTAAGAGGA +
Preference number: 5 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDVFCDV*VGEVRG
Trigger: TCCTCTTACTTCTCCTACCAATACATCACAGAATAC...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTAGTGTATTCTGTGATGTATaGGTAGGAGAAGTAAGAGGA +
Preference number: 5 (lower is better)
Translates to: KLQLMTCITITQTESSCSVFCDV*VGEVRG
Trigger: TCCTCTTACTTCTCCTACCAATACATCACAGAATAC...ACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTCTCATTCATATCTTCTaGGCTACGGAAGCTGAAATT +
Preference number: 5 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPLIHIF*ATEAEI
Trigger: AATTTCAGCTTCCGTAGCCAAGAAGATATGAATGAG...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTTCCTTGAGGGCAGACTaGTTGAAGGGACTGATGCTA +
Preference number: 5 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFSLRAD*LKGLML
Trigger: TAGCATCAGTCCCTTCAACAAGTCTGCCCTCAAGGA...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTCCTTGAGGGCAGACTaGTTGAAGGGACTGATGCTA +
Preference number: 5 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHSLRAD*LKGLML
Trigger: TAGCATCAGTCCCTTCAACAAGTCTGCCCTCAAGGA...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTCTATCACTTTTGTTaGCATTTTGATTGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDLYHFC*HFDCSQ
Trigger: CTGGCTGCAATCAAAATGCAAACAAAAGTGATAGAG...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTAGTATCACCCCAAAGAAGTaGCAACTAATGACATGTATC +
Preference number: 5 (lower is better)
Translates to: KLQLMTCITITQTESSCSITPKK*QLMTCI
Trigger: GATACATGTCATTAGTTGCAACTTCTTTGGGGTGAT...ACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp GTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGATCACCCCAAAGAAGTaGCAACTAATGACATGTATC +
Preference number: 5 (lower is better)
Translates to: VPKDVFENFLSLMRVVYLITPKK*QLMTCI
Trigger: GATACATGTCATTAGTTGCAACTTCTTTGGGGTGAT...CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTTTGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACAGTCACTCTACTTGGTaGTCAACAGTAGTTAAAGCA +
Preference number: 5 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDSHSTW*STVVKA
Trigger: TGCTTTAACTACTGTTGACAACCAAGTAGAGTGACT...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000650653.1
CDS-3UTR CAA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGAGTCACTCTACTTGGTaGTCAACAGTAGTTAAAGCA +
Preference number: 5 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLSHSTW*STVVKA
Trigger: TGCTTTAACTACTGTTGACAACCAAGTAGAGTGACT...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000650653.1
CDS TCA 90 bp GTTAGTACTCCCTTTTTAACAGGGTCAGAAGATGCAGCTGAAAGATaGAATCTCGAGCATACTAAGGAGAGAAAAGTGCAGATCAAAGTT +
Preference number: 5 (lower is better)
Translates to: VSTPFLTGSEDAAER*NLEHTKERKVQIKV
Trigger: AACTTTGATCTGCACTTTTCTCTCCTTAGTATGCTCGAGATTTCATCTTTCAGCTGCATCTTCTGACCCTGTTAAAAAGGGAGTACTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464961.1
CDS TCA 90 bp CTCCATTTGATCCAGCAATCCCACTATTGGGTATCTACCTCCTTATaGGGATCTTTATGTGCTTCCAATGTTTTCATGACAGTCAATTCT +
Preference number: 5 (lower is better)
Translates to: LHLIQQSHYWVSTSL*GSLCASNVFMTVNS
Trigger: AGAATTGACTGTCATGAAAACATTGGAAGCACATAAAGATCCTCATAAGGAGGTAGATACCCAATAGTGGGATTGCTGGATCAAATGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS-3UTR CAA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTCACGGGAACTGATTTaGATGTGCAATTGCTTGTTA +
Preference number: 5 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLSRELI*MCNCLL
Trigger: TAACAAGCAATTGCACATCAAAATCAGTTCCCGTGA...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTGAAGAAAAAGGGCGATaGAGACTTTCCTGTGAGCTG +
Preference number: 5 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFEEKGR*RLSCEL
Trigger: CAGCTCACAGGAAAGTCTCAATCGCCCTTTTTCTTC...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAAGAAAACAGGAAAGTTAGATACAAGCCAATTCCCTTCCCAAACCCCCTTAGATTAAGGTATATGAACTaGTCTTCACAGAGATCAGGG +
Preference number: 5 (lower is better)
Translates to: KENRKVRYKPIPFPNPLRLRYMN*SSQRSG
Trigger: CCCTGATCTCTGTGAAGACAAGTTCATATACCTTAA...TCTAAGGGGGTTTGGGAAGGGAATTGGCTTGTATCTAACTTTCCTGTTTTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR CAA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTGCTGTTCCATCCAGCTaGTCAGAAGTATCCTCTAGT +
Preference number: 5 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFAVPSS*SEVSSS
Trigger: ACTAGAGGATACTTCTGACAAGCTGGATGGAACAGC...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTGTACAAACAACCAATCTaGAAGATCATCTTTGTGGAC +
Preference number: 5 (lower is better)
Translates to: NFLSLMRVVYLSFLLRDLYKQPI*KIIFVD
Trigger: GTCCACAAAGATGATCTTCAAGATTGGTTGTTTGTA...CAGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAGTTGCAACTAATGACATGTATCACCATCACACAAACGGAGTCCAGCTGTAGTTACAAACAACCAATCTaGAAGATCATCTTTGTGGAC +
Preference number: 5 (lower is better)
Translates to: KLQLMTCITITQTESSCSYKQPI*KIIFVD
Trigger: GTCCACAAAGATGATCTTCAAGATTGGTTGTTTGTA...ACTACAGCTGGACTCCGTTTGTGTGATGGTGATACATGTCATTAGTTGCAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp GAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACTACAAACAACCAATCTaGAAGATCATCTTTGTGGAC +
Preference number: 5 (lower is better)
Translates to: ENFLSLMRVVYLSFLLRDYKQPI*KIIFVD
Trigger: GTCCACAAAGATGATCTTCAAGATTGGTTGTTTGTA...GTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp GAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGAGAGACCTTACAAACAACCAATCTaGAAGATCATCTTTGTGGAC +
Preference number: 5 (lower is better)
Translates to: ELPFIDEGGLSVLSFERPYKQPI*KIIFVD
Trigger: GTCCACAAAGATGATCTTCAAGATTGGTTGTTTGTA...AGGTCTCTCAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCCTTCACCTTTAAGCTaGGTGTCTGGGTCTGATCAA +
Preference number: 5 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFPSPLS*VSGSDQ
Trigger: TTGATCAGACCCAGACACCAAGCTTAAAGGTGAAGG...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTCTCATTCATATCTTCTaGGCTACGGAAGCTGAAATT +
Preference number: 5 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLLIHIF*ATEAEI
Trigger: AATTTCAGCTTCCGTAGCCAAGAAGATATGAATGAG...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTCATTCATATCTTCTaGGCTACGGAAGCTGAAATT +
Preference number: 5 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFLIHIF*ATEAEI
Trigger: AATTTCAGCTTCCGTAGCCAAGAAGATATGAATGAG...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAATTGAGGGCAGACTTGTaGAAGGGACTGATGCTATCT +
Preference number: 5 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKLRADL*KGLMLS
Trigger: AGATAGCATCAGTCCCTTCAACAAGTCTGCCCTCAA...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTTGAGGGCAGACTTGTaGAAGGGACTGATGCTATCT +
Preference number: 5 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHLRADL*KGLMLS
Trigger: AGATAGCATCAGTCCCTTCAACAAGTCTGCCCTCAA...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTTTGAGGGCAGACTTGTaGAAGGGACTGATGCTATCT +
Preference number: 5 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFLRADL*KGLMLS
Trigger: AGATAGCATCAGTCCCTTCAACAAGTCTGCCCTCAA...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAATCAAACATGGCTTCCTaGAGGGCAGACTTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKSNMAS*RADLLK
Trigger: CTTCAACAAGTCTGCCCTCAAGGAAGCCATGTTTGA...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTTCAAACATGGCTTCCTaGAGGGCAGACTTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFSNMAS*RADLLK
Trigger: CTTCAACAAGTCTGCCCTCAAGGAAGCCATGTTTGA...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp GTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTTGCTCTATCACTTTTGTTaGCATTTTGATTGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: VFENFLSLMRVVYLSFLLLYHFC*HFDCSQ
Trigger: CTGGCTGCAATCAAAATGCAAACAAAAGTGATAGAG...CAAAAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCATCACCCCAAAGAAGTaGCAACTAATGACATGTATC +
Preference number: 5 (lower is better)
Translates to: QITLQQWQTASLIAICLFITPKK*QLMTCI
Trigger: GATACATGTCATTAGTTGCAACTTCTTTGGGGTGAT...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp AAGGATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTATCACCCCAAAGAAGTaGCAACTAATGACATGTATC +
Preference number: 5 (lower is better)
Translates to: KDVFENFLSLMRVVYLSFITPKK*QLMTCI
Trigger: GATACATGTCATTAGTTGCAACTTCTTTGGGGTGAT...AAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp TCACACAAACGGAGTCCAGCTGTAGTTCAAATTAGTCCTGCTTTGTTTCACATCATAAAACTGAGTGACTaGTTACACAGTGAGACAGAA +
Preference number: 5 (lower is better)
Translates to: SHKRSPAVVQISPALFHIIKLSD*LHSETE
Trigger: TTCTGTCTCACTGTGTAACAAGTCACTCAGTTTTAT...GATGTGAAACAAAGCAGGACTAATTTGAACTACAGCTGGACTCCGTTTGTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000650653.1
CDS-3UTR CAA 90 bp CAGATAACTCTGCAACAATGGCAAACTGCTTCCCTAATAGCTATTTGCCTTTTCTGTAGCTATATACCTTaGATTGTGGTAGCTACACCT +
Preference number: 5 (lower is better)
Translates to: QITLQQWQTASLIAICLFCSYIP*IVVATP
Trigger: AGGTGTAGCTACCACAATCAAAGGTATATAGCTACA...GAAAAGGCAAATAGCTATTAGGGAAGCAGTTTGCCATTGTTGCAGAGTTATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000650653.1
CDS GCA 90 bp TGCCAAACTGCATTCCACAGCAGCTGTACCACCAATTTGTATTTATaGAAGCAATGTATAAGGGTTCCAATTTTTGTACATCCTCATCAA +
Preference number: 5 (lower is better)
Translates to: CQTAFHSSCTTNLYL*KQCIRVPIFVHPHQ
Trigger: TTGATGAGGATGTACAAAAATTGGAACCCTTATACATTGCTTGCATAAATACAAATTGGTGGTACAGCTGCTGTGGAATGCAGTTTGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464961.1
CDS-3UTR CAA 90 bp GCTAGATGTGGTAGAAGTGCAGTTATGAAAATTCTACAGGCAATCATGGATTCATCACGGGAACTGATTTaGATGTGCAATTGCTTGTTA +
Preference number: 5 (lower is better)
Translates to: ARCGRSAVMKILQAIMDSSRELI*MCNCLL
Trigger: TAACAAGCAATTGCACATCAAAATCAGTTCCCGTGA...TGAATCCATGATTGCCTGTAGAATTTTCATAACTGCACTTCTACCACATCTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333778.10
ENST00000487200.5
CDS-3UTR CAA 90 bp GATGTGTTTGAGAACTTCCTTTCATTGATGAGGGTGGTCTATCTGTCCTTTCTTTACAAACAACCAATCTaGAAGATCATCTTTGTGGAC +
Preference number: 5 (lower is better)
Translates to: DVFENFLSLMRVVYLSFLYKQPI*KIIFVD
Trigger: GTCCACAAAGATGATCTTCAAGATTGGTTGTTTGTA...AAGAAAGGACAGATAGACCACCCTCATCAATGAAAGGAAGTTCTCAAACACATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCAGGACCACCACACATaGAATCGCCATCATCTTTTT +
Preference number: 5 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFQDHHT*NRHHLF
Trigger: AAAAAGATGATGGCGATTCAATGTGTGGTGGTCCTG...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAACAGGACCACCACACATaGAATCGCCATCATCTTTTT +
Preference number: 5 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKQDHHT*NRHHLF
Trigger: AAAAAGATGATGGCGATTCAATGTGTGGTGGTCCTG...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTTGGGTAGTCTGCAGTTaGAATGATAGGACAAAGCAC +
Preference number: 5 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFWVVCS*NDRTKH
Trigger: GTGCTTTGTCCTATCATTCAAACTGCAGACTACCCA...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATAGGTTTAGGGTTTCCTaGGACACTCTCTCTATCACT +
Preference number: 5 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHRFRVS*DTLSIT
Trigger: AGTGATAGAGAGAGTGTCCAAGGAAACCCTAAACCT...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTCCTCCAGAACCTGTTaGTGCACGTTTGATGTAAAG +
Preference number: 5 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHSSRTC*CTFDVK
Trigger: CTTTACATCAAACGTGCACAAACAGGTTCTGGAGGA...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTGAGAACTTCCTTTCATaGATGAGGGTGGTCTATCTG +
Preference number: 5 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFENFLS*MRVVYL
Trigger: CAGATAGACCACCCTCATCAATGAAAGGAAGTTCTC...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTATACAAAGACAGCCTaGGCACCATCTTCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHYTKTA*APSSLS
Trigger: TGAGAGAGAAGATGGTGCCAAGGCTGTCTTTGTATA...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp GGAAGCATGAAGAAGAGATACGCAAACCAACGTCAACTTTTTAATTTGATAGACTCACGGGAACTGATTTaGATGTGCAATTGCTTGTTA +
Preference number: 5 (lower is better)
Translates to: GSMKKRYANQRQLFNLIDSRELI*MCNCLL
Trigger: TAACAAGCAATTGCACATCAAAATCAGTTCCCGTGA...GTCTATCAAATTAAAAAGTTGACGTTGGTTTGCGTATCTCTTCTTCATGCTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313350.10
CDS-3UTR CAA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTATCACCCCAAAGAAGTaGCAACTAATGACATGTATC +
Preference number: 5 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFITPKK*QLMTCI
Trigger: GATACATGTCATTAGTTGCAACTTCTTTGGGGTGAT...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATGTATTCTGTGATGTATaGGTAGGAGAAGTAAGAGGA +
Preference number: 5 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHVFCDV*VGEVRG
Trigger: TCCTCTTACTTCTCCTACCAATACATCACAGAATAC...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAACTCATTCATATCTTCTaGGCTACGGAAGCTGAAATT +
Preference number: 5 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKLIHIF*ATEAEI
Trigger: AATTTCAGCTTCCGTAGCCAAGAAGATATGAATGAG...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAACTCTATCACTTTTGTTaGCATTTTGATTGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKLYHFC*HFDCSQ
Trigger: CTGGCTGCAATCAAAATGCAAACAAAAGTGATAGAG...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAAATCACCCCAAAGAAGTaGCAACTAATGACATGTATC +
Preference number: 5 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKITPKK*QLMTCI
Trigger: GATACATGTCATTAGTTGCAACTTCTTTGGGGTGAT...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000650653.1
CDS-3UTR CAA 90 bp CCTTGGCACCATCTTCTCTCTCATCAGGATCAATATTTTCAAGTAAGACAATTTATAAAACTGAGTGACTaGTTACACAGTGAGACAGAA +
Preference number: 5 (lower is better)
Translates to: PWHHLLSHQDQYFQVRQFIKLSD*LHSETE
Trigger: TTCTGTCTCACTGTGTAACAAGTCACTCAGTTTTAT...AAATTGTCTTACTTGAAAATATTGATCCTGATGAGAGAGAAGATGGTGCCAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000650653.1
CDS-3UTR CAA 90 bp AAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTCATTGTAGCTATATACCTTaGATTGTGGTAGCTACACCT +
Preference number: 5 (lower is better)
Translates to: KLGNNSKFQRMCLRTSFHCSYIP*IVVATP
Trigger: AGGTGTAGCTACCACAATCAAAGGTATATAGCTACA...ATGAAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000650653.1
CDS-3UTR CAA 90 bp AAAGTTACATGCAGACTGAGGATAGTCCTCTGTTACAGAAAATACAAAACGAAAAGTCACTCTACTTGGTaGTCAACAGTAGTTAAAGCA +
Preference number: 5 (lower is better)
Translates to: KVTCRLRIVLCYRKYKTKSHSTW*STVVKA
Trigger: TGCTTTAACTACTGTTGACAACCAAGTAGAGTGACT...TTTCGTTTTGTATTTTCTGTAACAGAGGACTATCCTCAGTCTGCATGTAACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000650653.1
CDS TCA 90 bp TTTATGGGGTATAATGTGATGTTTCAATACATGTACACTGTGGAATaGCCAAATCAGGCTAATCAACATATCCATCACCTCAGATACTTA +
Preference number: 5 (lower is better)
Translates to: FMGYNVMFQYMYTVE*PNQANQHIHHLRYL
Trigger: TAAGTATCTGAGGTGATGGATATGTTGATTAGCCTGATTTGGTCATTCCACAGTGTACATGTATTGAAACATCACATTATACCCCATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464961.1
CDS-3UTR CAA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTTACAAACAACCAATCTaGAAGATCATCTTTGTGGAC +
Preference number: 5 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFYKQPI*KIIFVD
Trigger: GTCCACAAAGATGATCTTCAAGATTGGTTGTTTGTA...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
CDS-3UTR CAA 90 bp CTAAAACTGGGAAACAATAGTAAGTTCCAAAGGATGTGTTTGAGAACTTCCTTTATAAAACTGAGTGACTaGTTACACAGTGAGACAGAA +
Preference number: 5 (lower is better)
Translates to: LKLGNNSKFQRMCLRTSFIKLSD*LHSETE
Trigger: TTCTGTCTCACTGTGTAACAAGTCACTCAGTTTTAT...AAAGGAAGTTCTCAAACACATCCTTTGGAACTTACTATTGTTTCCCAGTTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000650653.1
CDS GCA 72 bp GGCGCAGAAGTACTCCATGCTGCGGGGCTCCATGGCTaGGGCCGCCCGCCCGCCTGCCAGTCTGTGAGCGGC +
Preference number: 6 (lower is better)
Translates to: GAEVLHAAGLHG*GRPPACQSVSG
Trigger: GCCGCTCACAGACTGGCAGGCGGGCGGGCGGCCGCAGCCATGGAGCCCCGCAGCATGGAGTACTTCTGCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000682230.1
CDS CCA 72 bp CCTGGGCGCAGAAGTACTCCATGCTGCGGGGCTCCATaGCTGCGGCCGCCCGCCCGCCTGCCAGTCTGTGAG +
Preference number: 6 (lower is better)
Translates to: PGRRSTPCCGAP*LRPPARLPVCE
Trigger: CTCACAGACTGGCAGGCGGGCGGGCGGCCGCAGCCATGGAGCCCCGCAGCATGGAGTACTTCTGCGCCCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000682230.1
CDS CAA 72 bp CGACGCCGGCGAGGGCCCTCCAGTCCGGCTAGCGTTTaGCTGCGGAGGTGGTGGAGGTGGCTGCGGAAACCG +
Preference number: 6 (lower is better)
Translates to: RRRRGPSSPASV*LRRWWRWLRKP
Trigger: CGGTTTCCGCAGCCACCTCCACCACCTCCGCAGCAAAACGCTAGCCGGACTGGAGGGCCCTCGCCGGCGTCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399362.8
CDS CAA 90 bp ACGTCAGCACGACGCCGGCGAGGGCCCTCCAGTCCGGCTAGCGTTTaGCTGCGGAGGTGGTGGAGGTGGCTGCGGAAACCGCTGGGAGCG +
Preference number: 6 (lower is better)
Translates to: TSARRRRGPSSPASV*LRRWWRWLRKPLGA
Trigger: CGCTCCCAGCGGTTTCCGCAGCCACCTCCACCACCTCCGCAGCAAAACGCTAGCCGGACTGGAGGGCCCTCGCCGGCGTCGTGCTGACGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399362.8
CDS CAA 72 bp CTCGAACCCACCCAGCCGGTGAGCGCGTCGACTGTCTaGCCTAGGCGGCCCAGGTCCTCCTCCAGGTCCGAG +
Preference number: 6 (lower is better)
Translates to: LEPTQPVSASTV*PRRPRSSSRSE
Trigger: CTCGGACCTGGAGGAGGACCTGGGCCGCCTAGGCAAGACAGTCGACGCGCTCACCGGCTGGGTGGGTTCGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000467956.1
ENST00000468888.6
ENST00000682230.1
CDS CCA 72 bp GGGCCCTCCAGTCCGGCTAGCGTTTTGCTGCGGAGGTaGTGGAGGTGGCTGCGGAAACCGCTGGGAGCGATA +
Preference number: 6 (lower is better)
Translates to: GPSSPASVLLRR*WRWLRKPLGAI
Trigger: TATCGCTCCCAGCGGTTTCCGCAGCCACCTCCACCACCTCCGCAGCAAAACGCTAGCCGGACTGGAGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399362.8
CDS GCA 72 bp AAGTACAGCTCAGTGCCTGCGCCACTGGGCTCGGCCTaGAGCCTGCAGACACCCGGAGCACTGTGTGACCCA +
Preference number: 6 (lower is better)
Translates to: KYSSVPAPLGSA*SLQTPGALCDP
Trigger: TGGGTCACACAGTGCTCCGGGTGTCTGCAGGCTGCAGGCCGAGCCCAGTGGCGCAGGCACTGAGCTGTACTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000480013.6
ENST00000496954.2
ENST00000650653.1
CDS CCA 72 bp CCCTCCAGTCCGGCTAGCGTTTTGCTGCGGAGGTGGTaGAGGTGGCTGCGGAAACCGCTGGGAGCGATAGGA +
Preference number: 6 (lower is better)
Translates to: PSSPASVLLRRW*RWLRKPLGAIG
Trigger: TCCTATCGCTCCCAGCGGTTTCCGCAGCCACCTCCACCACCTCCGCAGCAAAACGCTAGCCGGACTGGAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399362.8
CDS TCA 72 bp ATGATACCCGGTAGTTGCTCGAACCCACCCAGCCGGTaGGCGCGTCGACTGTCTTGCCTAGGCGGCCCAGGT +
Preference number: 6 (lower is better)
Translates to: MIPGSCSNPPSR*ARRLSCLGGPG
Trigger: ACCTGGGCCGCCTAGGCAAGACAGTCGACGCGCTCACCGGCTGGGTGGGTTCGAGCAACTACCGGGTATCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000467956.1
ENST00000468888.6
ENST00000682230.1
CDS GCA 72 bp CCGGAGCACTGTGTGACCCAGGCCTCGCTGCAGCTCTaGACCGCAATAGCCAACAGCTGCTACTCCACTTCA +
Preference number: 6 (lower is better)
Translates to: PEHCVTQASLQL*TAIANSCYSTS
Trigger: TGAAGTGGAGTAGCAGCTGTTGGCTATTGCGGTGCAGAGCTGCAGCGAGGCCTGGGTCACACAGTGCTCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480013.6
ENST00000650653.1
CDS GCA 72 bp GCGCCCGCTTCGCACAGACTGTCCAGCAGCATGATGTaGCTTGGCACCTGCAGCAGCATTCACATCAATGTC +
Preference number: 6 (lower is better)
Translates to: APASHRLSSSMM*LGTCSSIHINV
Trigger: GACATTGATGTGAATGCTGCTGCAGGTGCCAAGGCACATCATGCTGCTGGACAGTCTGTGCGAAGCGGGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000313350.10
ENST00000333778.10
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487200.5
ENST00000635664.1
ENST00000650653.1
ENST00000682230.1
CDS GCA 72 bp AGAGGTCAAATAGCACAGCAAATAAGTACAGCTCAGTaGCTGCGCCACTGGGCTCGGCCTGCAGCCTGCAGA +
Preference number: 6 (lower is better)
Translates to: RGQIAQQISTAQ*LRHWARPAACR
Trigger: TCTGCAGGCTGCAGGCCGAGCCCAGTGGCGCAGGCACTGAGCTGTACTTATTTGCTGTGCTATTTGACCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000461133.8
ENST00000480013.6
ENST00000486796.1
ENST00000496954.2
ENST00000650653.1
CDS CCA 72 bp CACTTCGTGAACGCTGCAGGCTTCCTGGAAGGGAACTaGCTTTGCTGCTGCCTGCTGATACTCTTCCAGCCA +
Preference number: 6 (lower is better)
Translates to: HFVNAAGFLEGN*LCCCLLILFQP
Trigger: TGGCTGGAAGAGTATCAGCAGGCAGCAGCAAAGCCAGTTCCCTTCCAGGAAGCCTGCAGCGTTCACGAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000313350.10
ENST00000333778.10
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487200.5
ENST00000635664.1
ENST00000650653.1
ENST00000682230.1
CDS CAA 72 bp CGTGAACGCTGCAGGCTTCCTGGAAGGGAACTGGCTTaGCTGCTGCCTGCTGATACTCTTCCAGCCACAGTT +
Preference number: 6 (lower is better)
Translates to: RERCRLPGRELA*LLPADTLPATV
Trigger: AACTGTGGCTGGAAGAGTATCAGCAGGCAGCAGCAAAGCCAGTTCCCTTCCAGGAAGCCTGCAGCGTTCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000313350.10
ENST00000333778.10
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487200.5
ENST00000635664.1
ENST00000650653.1
ENST00000682230.1
CDS CAA 72 bp TCTGCTGCTCTCCCGACTAGCTTCCCGGCTGCATCCTaGACTCACACTTGGTCGAGGAATACGACTGCTTCG +
Preference number: 6 (lower is better)
Translates to: SAALPTSFPAAS*THTWSRNTTAS
Trigger: CGAAGCAGTCGTATTCCTCGACCAAGTGTGAGTCAAGGATGCAGCCGGGAAGCTAGTCGGGAGAGCAGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000475576.1
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
ENST00000682230.1
CDS TCA 72 bp GACTCGCATGGCACTAACAGAAGACGACAGTCGACTTaGTTGGCTGATCCCATAACCTGGACCGAGGGGCTG +
Preference number: 6 (lower is better)
Translates to: DSHGTNRRRQST*LADPITWTEGL
Trigger: CAGCCCCTCGGTCCAGGTTATGGGATCAGCCAATCAAGTCGACTGTCGTCTTCTGTTAGTGCCATGCGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000635664.1
ENST00000682230.1
CDS GCA 72 bp GCTGCAGGCTTCCTGGAAGGGAACTGGCTTTGCTGCTaGCTGCTGATACTCTTCCAGCCACAGTTGATGGAT +
Preference number: 6 (lower is better)
Translates to: AAGFLEGNWLCC*LLILFQPQLMD
Trigger: ATCCATCAACTGTGGCTGGAAGAGTATCAGCAGGCAGCAGCAAAGCCAGTTCCCTTCCAGGAAGCCTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000313350.10
ENST00000333778.10
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487200.5
ENST00000635664.1
ENST00000650653.1
ENST00000682230.1
CDS CCA 72 bp TTTGAACACCAGAGCTCACAGTGGACAGGGCTGTTGTaGTCAGAACTCTTCCTGGAGACCCAGACCGGCTAC +
Preference number: 6 (lower is better)
Translates to: FEHQSSQWTGLL*SELFLETQTGY
Trigger: GTAGCCGGTCTGGGTCTCCAGGAAGAGTTCTGACCACAACAGCCCTGTCCACTGTGAGCTCTGGTGTTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
ENST00000682230.1
CDS CCA 72 bp CACAGTGGACAGGGCTGTTGTGGTCAGAACTCTTCCTaGAGACCCAGACCGGCTACCAGCACCAATGGTATT +
Preference number: 6 (lower is better)
Translates to: HSGQGCCGQNSS*RPRPATSTNGI
Trigger: AATACCATTGGTGCTGGTAGCCGGTCTGGGTCTCCAGGAAGAGTTCTGACCACAACAGCCCTGTCCACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635664.1
CDS GCA 72 bp CTTCATCAGCTTCCTCCTTCCCAGGCTTTTGTTTGCTaGTTGTCTTGTCTGCTCTCCCTTGCCTCAGGTGGC +
Preference number: 6 (lower is better)
Translates to: LHQLPPSQAFVC*LSCLLSLASGG
Trigger: GCCACCTGAGGCAAGGGAGAGCAGACAAGACAAGCAGCAAACAAAAGCCTGGGAAGGAGGAAGCTGATGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464961.1
CDS CAA 72 bp GCTTCCTCCTTCCCAGGCTTTTGTTTGCTGCTTGTCTaGTCTGCTCTCCCTTGCCTCAGGTGGCTATGGGTA +
Preference number: 6 (lower is better)
Translates to: ASSFPGFCLLLV*SALPCLRWLWV
Trigger: TACCCATAGCCACCTGAGGCAAGGGAGAGCAGACAAGACAAGCAGCAAACAAAAGCCTGGGAAGGAGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464961.1
CDS GCA 72 bp GGCTGCCTACAATTCTGTCTTAGCCCAACTCCTACTTaGATGGAGCCCAAAGAACATCCAGAGGTCCAAGCC +
Preference number: 6 (lower is better)
Translates to: GCLQFCLSPTPT*MEPKEHPEVQA
Trigger: GGCTTGGACCTCTGGATGTTCTTTGGGCTCCATGCAAGTAGGAGTTGGGCTAAGACAGAATTGTAGGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464961.1
CDS CAA 72 bp CATCAGCTTCCTCCTTCCCAGGCTTTTGTTTGCTGCTaGTCTTGTCTGCTCTCCCTTGCCTCAGGTGGCTAT +
Preference number: 6 (lower is better)
Translates to: HQLPPSQAFVCC*SCLLSLASGGY
Trigger: ATAGCCACCTGAGGCAAGGGAGAGCAGACAAGACAAGCAGCAAACAAAAGCCTGGGAAGGAGGAAGCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464961.1
CDS CAA 90 bp AATCTGCCTTGGCATTTCCCATGCCAGCAAGTGGTGCTGAAAGTTTaGCTCTCACCCGGCCATCTTCAGATGCTGTTCCATCCAGCTTGT +
Preference number: 6 (lower is better)
Translates to: NLPWHFPCQQVVLKV*LSPGHLQMLFHPAC
Trigger: ACAAGCTGGATGGAACAGCATCTGAAGATGGCCGGGTGAGAGCAAAACTTTCAGCACCACTTGCTGGCATGGGAAATGCCAAGGCAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
ENST00000682230.1
CDS TCA 72 bp GGTAGGAGAAGTAAGAGGACTGGACCAGTTAGCTGGTaGTCGTGGTGTTGGTCTTGTCAAAGGACTCCCCAT +
Preference number: 6 (lower is better)
Translates to: GRRSKRTGPVSW*SWCWSCQRTPH
Trigger: ATGGGGAGTCCTTTGACAAGACCAACACCACGATCACCAGCTAACTGGTCCAGTCCTCTTACTTCTCCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000480385.1
ENST00000494261.1
ENST00000635664.1
ENST00000650653.1
ENST00000682230.1
CDS GCA 72 bp CTTCTTCATCAGCTTCCTCCTTCCCAGGCTTTTGTTTaGTGCTTGTCTTGTCTGCTCTCCCTTGCCTCAGGT +
Preference number: 6 (lower is better)
Translates to: LLHQLPPSQAFV*CLSCLLSLASG
Trigger: ACCTGAGGCAAGGGAGAGCAGACAAGACAAGCAGCAAACAAAAGCCTGGGAAGGAGGAAGCTGATGAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464961.1
CDS CCA 72 bp GCCTACAATTCTGTCTTAGCCCAACTCCTACTTGCATaGAGCCCAAAGAACATCCAGAGGTCCAAGCCTAGG +
Preference number: 6 (lower is better)
Translates to: AYNSVLAQLLLA*SPKNIQRSKPR
Trigger: CCTAGGCTTGGACCTCTGGATGTTCTTTGGGCTCCATGCAAGTAGGAGTTGGGCTAAGACAGAATTGTAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464961.1
CDS TCA 72 bp AGGATAGCAACCTTCACCTTGGAGCTCCAAAAAGAGTaGAGCTGGTCCCGAAGTGCTGGCTTGACTGTCTTT +
Preference number: 6 (lower is better)
Translates to: RIATFTLELQKE*SWSRSAGLTVF
Trigger: AAAGACAGTCAAGCCAGCACTTCGGGACCAGCTTCACTCTTTTTGGAGCTCCAAGGTGAAGGTTGCTATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480385.1
CDS CAA 72 bp GGGACCCCTGCTCTAAAGTCTTTTCTGAGCATACTTTaGGTGGATTCCTCAGTACACGTGGGCCCAGCAAAA +
Preference number: 6 (lower is better)
Translates to: GTPALKSFLSIL*VDSSVHVGPAK
Trigger: TTTTGCTGGGCCCACGTGTACTGAGGAATCCACCAAAAGTATGCTCAGAAAAGACTTTAGAGCAGGGGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464961.1
CDS CAA 90 bp CTTGCACTGTTGGCAGGATTTCCGGATGTTTTAGGTGCAGGAACCTaGAAGGCTGATGCAGCTGATGATGGCCTATTTCCATCCACTGAT +
Preference number: 6 (lower is better)
Translates to: LALLAGFPDVLGAGT*KADAADDGLFPSTD
Trigger: ATCAGTGGATGGAAATAGGCCATCATCAGCTGCATCAGCCTTCAAGGTTCCTGCACCTAAAACATCCGGAAATCCTGCCAACAGTGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000313350.10
ENST00000333778.10
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000476433.5
ENST00000480013.6
ENST00000482896.5
ENST00000485378.6
ENST00000486796.1
ENST00000487200.5
ENST00000496954.2
ENST00000498331.1
ENST00000635664.1
ENST00000650653.1
ENST00000682230.1
CDS GCA 72 bp ACCGTGCCCGGCCTTTATGTTAACTTTTTGAGGAACTaGCAAACTGCATTCCACAGCAGCTGTACCACCAAT +
Preference number: 6 (lower is better)
Translates to: TVPGLYVNFLRN*QTAFHSSCTTN
Trigger: ATTGGTGGTACAGCTGCTGTGGAATGCAGTTTGGCAGTTCCTCAAAAAGTTAACATAAAGGCCGGGCACGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464961.1
CDS GCA 72 bp CAGCCACCAGGCAGAAGACACAAGCTTTCCGAACACTaGTCTCTGAATTATCATAACCCTACGGAGAGAAGT +
Preference number: 6 (lower is better)
Translates to: QPPGRRHKLSEH*SLNYHNPTERS
Trigger: ACTTCTCTCCGTAGGGTTATGATAATTCAGAGAGCAGTGTTCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464961.1
CDS CAA 90 bp ATTTCACAAATTATCTTCTTCATCAGCTTCCTCCTTCCCAGGCTTTaGTTTGCTGCTTGTCTTGTCTGCTCTCCCTTGCCTCAGGTGGCT +
Preference number: 6 (lower is better)
Translates to: ISQIIFFISFLLPRL*FAACLVCSPLPQVA
Trigger: AGCCACCTGAGGCAAGGGAGAGCAGACAAGACAAGCAGCAAACAAAAGCCTGGGAAGGAGGAAGCTGATGAAGAAGATAATTTGTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464961.1
CDS TCA 72 bp GACAGCTCCTTCAACAACTCTGCAACTAGGTCAGAATaGTCTAGGGAAAGATCGTCAGGAAACTGGTCAGCA +
Preference number: 6 (lower is better)
Translates to: DSSFNNSATRSE*SRERSSGNWSA
Trigger: TGCTGACCAGTTTCCTGACGATCTTTCCCTAGATCATTCTGACCTAGTTGCAGAGTTGTTGAAGGAGCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000476251.1
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
ENST00000682230.1
CDS TCA 72 bp CCCTTCCCAGAACAGTTAGGGAATCGCATGGCAGAATaGGGTATTATGGGCAAGGAGTGGAATAGGAATGTA +
Preference number: 6 (lower is better)
Translates to: PFPEQLGNRMAE*GIMGKEWNRNV
Trigger: TACATTCCTATTCCACTCCTTGCCCATAATACCTCATTCTGCCATGCGATTCCCTAACTGTTCTGGGAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464961.1
CDS TCA 72 bp CAGGCAGAAGACACAAGCTTTCCGAACACTGCTCTCTaGATTATCATAACCCTACGGAGAGAAGTCCACTGT +
Preference number: 6 (lower is better)
Translates to: QAEDTSFPNTAL*IIITLRREVHC
Trigger: ACAGTGGACTTCTCTCCGTAGGGTTATGATAATTCAGAGAGCAGTGTTCGGAAAGCTTGTGTCTTCTGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464961.1
CDS GCA 72 bp CAGCCACCAGGCAGAAGACACAAGCTTTCCGAACACTaGTCTCTGAATTATCATAACCCTCCTTATGAGGAT +
Preference number: 6 (lower is better)
Translates to: QPPGRRHKLSEH*SLNYHNPPYED
Trigger: ATCCTCATAAGGAGGGTTATGATAATTCAGAGAGCAGTGTTCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487553.5
CDS TCA 72 bp AGGAATACTACCATTTCGAGAACTATAGGAGCGTTCTaGACAAGCACTAGATGCATCGCTGTTGGCGTCATC +
Preference number: 6 (lower is better)
Translates to: RNTTISRTIGAF*TSTRCIAVGVI
Trigger: GATGACGCCAACAGCGATGCATCTAGTGCTTGTTCAGAACGCTCCTATAGTTCTCGAAATGGTAGTATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000475576.1
ENST00000480013.6
ENST00000491045.1
ENST00000635664.1
ENST00000650653.1
ENST00000682230.1
CDS TCA 72 bp CTTGAGGGCAGACTTGTTGAAGGGACTGATGCTATCTaGATAGTTATATGGATTATAGTCTCGAGAGCGTGG +
Preference number: 6 (lower is better)
Translates to: LEGRLVEGTDAI*IVIWIIVSRAW
Trigger: CCACGCTCTCGAGACTATAATCCATATAACTATTCAGATAGCATCAGTCCCTTCAACAAGTCTGCCCTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000476251.1
ENST00000480013.6
ENST00000487553.5
ENST00000635664.1
ENST00000650653.1
ENST00000682230.1
CDS GCA 72 bp ATTAACTGCTCTCATTATGCAGGAAGCATTTCTGGCTaGCGTAAACAAATCACGTCAAAGGCAGCCCATCAA +
Preference number: 6 (lower is better)
Translates to: INCSHYAGSISG*RKQITSKAAHQ
Trigger: TTGATGGGCTGCCTTTGACGTGATTTGTTTACGGCAGCCAGAAATGCTTCCTGCATAATGAGAGCAGTTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482896.5
CDS GCA 72 bp TGCATAAACAGGAATAGCCCAGTTTCCATGATTAACTaGTCTCATTATGCAGGAAGCATTTCTGGCTGCCGT +
Preference number: 6 (lower is better)
Translates to: CINRNSPVSMIN*SHYAGSISGCR
Trigger: ACGGCAGCCAGAAATGCTTCCTGCATAATGAGAGCAGTTAATCATGGAAACTGGGCTATTCCTGTTTATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482896.5
CDS CAA 72 bp AGGCTTTTGTTTGCTGCTTGTCTTGTCTGCTCTCCCTaGCCTCAGGTGGCTATGGGTAGTATGTTTTTAAAT +
Preference number: 6 (lower is better)
Translates to: RLLFAACLVCSP*PQVAMGSMFLN
Trigger: ATTTAAAAACATACTACCCATAGCCACCTGAGGCAAGGGAGAGCAGACAAGACAAGCAGCAAACAAAAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464961.1
CDS TCA 72 bp CCCTTTTTAACAGGGTCAGAAGATGCAGCTGAAAGATaGAATCTCGAGCATACTAAGGAGAGAAAAGTGCAG +
Preference number: 6 (lower is better)
Translates to: PFLTGSEDAAER*NLEHTKERKVQ
Trigger: CTGCACTTTTCTCTCCTTAGTATGCTCGAGATTTCATCTTTCAGCTGCATCTTCTGACCCTGTTAAAAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464961.1
CDS TCA 72 bp CAGGCAGAAGACACAAGCTTTCCGAACACTGCTCTCTaGATTATCATAACCCTCCTTATGAGGATCTTTATG +
Preference number: 6 (lower is better)
Translates to: QAEDTSFPNTAL*IIITLLMRIFM
Trigger: CATAAAGATCCTCATAAGGAGGGTTATGATAATTCAGAGAGCAGTGTTCGGAAAGCTTGTGTCTTCTGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487553.5
CDS GCA 72 bp ACAAACTCTCCCAGTCTTTGCAGATTGACTCTGAGCTaGGTAATCATTCAATTAGCTAGGCTGCCTACAATT +
Preference number: 6 (lower is better)
Translates to: TNSPSLCRLTLS*VIIQLARLPTI
Trigger: AATTGTAGGCAGCCTAGCTAATTGAATGATTACGCAGCTCAGAGTCAATCTGCAAAGACTGGGAGAGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464961.1
CDS CCA 72 bp AGGTGGGCTACAGTAATACAAGCTTCTCTAACCACCTaGGATCTAAGATCCTTAGCTGAAAGTTTAAGTGCT +
Preference number: 6 (lower is better)
Translates to: RWATVIQASLTT*DLRSLAESLSA
Trigger: AGCACTTAAACTTTCAGCTAAGGATCTTAGATCCCAGGTGGTTAGAGAAGCTTGTATTACTGTAGCCCACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000313350.10
ENST00000333778.10
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000485378.6
ENST00000487200.5
ENST00000496954.2
ENST00000635664.1
ENST00000650653.1
ENST00000682230.1
CDS CAA 72 bp ACTCCTCACTATCCGATAAAACCTAAATTCATTGGTTaGGTAGCTCAAGGTAGTCACATAATCCAGGCCCGA +
Preference number: 6 (lower is better)
Translates to: TPHYPIKPKFIG*VAQGSHIIQAR
Trigger: TCGGGCCTGGATTATGTGACTACCTTGAGCTACCAAACCAATGAATTTAGGTTTTATCGGATAGTGAGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464961.1
CDS CAA 90 bp GCAGTCAGCACTCCTCACTATCCGATAAAACCTAAATTCATTGGTTaGGTAGCTCAAGGTAGTCACATAATCCAGGCCCGATTAAGTTTT +
Preference number: 6 (lower is better)
Translates to: AVSTPHYPIKPKFIG*VAQGSHIIQARLSF
Trigger: AAAACTTAATCGGGCCTGGATTATGTGACTACCTTGAGCTACCAAACCAATGAATTTAGGTTTTATCGGATAGTGAGGAGTGCTGACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464961.1
CDS TCA 72 bp AGCAGTGATCGAATTTTCTTCAGTGCATTGGCACGCTaGTCCCAGTCATGTTTATCATCTGACAAAATTTCC +
Preference number: 6 (lower is better)
Translates to: SSDRIFFSALAR*SQSCLSSDKIS
Trigger: GGAAATTTTGTCAGATGATAAACATGACTGGGATCAGCGTGCCAATGCACTGAAGAAAATTCGATCACTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000313350.10
ENST00000333778.10
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000476433.5
ENST00000480013.6
ENST00000482896.5
ENST00000485378.6
ENST00000487200.5
ENST00000496954.2
ENST00000635664.1
ENST00000650653.1
ENST00000682230.1
CDS GCA 72 bp CCGAATGATAAATCTGATTGCTGCACATCCAGAAGTTaGCATGACTTTTGCACTATTGGGGACGAGATTAAA +
Preference number: 6 (lower is better)
Translates to: PNDKSDCCTSRS*HDFCTIGDEIK
Trigger: TTTAATCTCGTCCCCAATAGTGCAAAAGTCATGGCAACTTCTGGATGTGCAGCAATCAGATTTATCATTCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000313350.10
ENST00000333778.10
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000485378.6
ENST00000487200.5
ENST00000635664.1
ENST00000650653.1
ENST00000682230.1
CDS GCA 72 bp GGGTACATGAGTATGCCGAATGATAAATCTGATTGCTaGACATCCAGAAGTTGCCATGACTTTTGCACTATT +
Preference number: 6 (lower is better)
Translates to: GYMSMPNDKSDC*TSRSCHDFCTI
Trigger: AATAGTGCAAAAGTCATGGCAACTTCTGGATGTGCAGCAATCAGATTTATCATTCGGCATACTCATGTACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000313350.10
ENST00000333778.10
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000485378.6
ENST00000487200.5
ENST00000635664.1
ENST00000650653.1
ENST00000682230.1
CDS GCA 72 bp ATGAGGACCTGTCTGATTGTGGAAGAGATGCTACACTaGCAGAACTCTTTAAGTAAGTTTGAAGACTCTTCT +
Preference number: 6 (lower is better)
Translates to: MRTCLIVEEMLH*QNSLSKFEDSS
Trigger: AGAAGAGTCTTCAAACTTACTTAAAGAGTTCTGGCAGTGTAGCATCTCTTCCACAATCAGACAGGTCCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000313350.10
ENST00000333778.10
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487200.5
ENST00000635664.1
ENST00000650653.1
ENST00000682230.1
CDS CCA 72 bp AGGGAATTATATAATGTTTCAGCTTCACCAGGAAAGTaGTTTCTAAGACCCATGTATGTCTTTCTTGCCTCC +
Preference number: 6 (lower is better)
Translates to: RELYNVSASPGK*FLRPMYVFLAS
Trigger: GGAGGCAAGAAAGACATACATGGGTCTTAGAAACCACTTTCCTGGTGAAGCTGAAACATTATATAATTCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000313350.10
ENST00000333778.10
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000487200.5
ENST00000635664.1
ENST00000650653.1
ENST00000682230.1
CDS CAA 72 bp TCAAATGCACTTGGAGATAAAGTATTCTGTGATGTATaGGTAGGAGAAGTAAGAGGACTGGACCAGTTAGCT +
Preference number: 6 (lower is better)
Translates to: SNALGDKVFCDV*VGEVRGLDQLA
Trigger: AGCTAACTGGTCCAGTCCTCTTACTTCTCCTACCAATACATCACAGAATACTTTATCTCCAAGTGCATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000480385.1
ENST00000494261.1
ENST00000635664.1
ENST00000650653.1
ENST00000682230.1
CDS CAA 72 bp AAACAAAACAAGACAAACTCTCCCAGTCTTTGCAGATaGACTCTGAGCTGCGTAATCATTCAATTAGCTAGG +
Preference number: 6 (lower is better)
Translates to: KQNKTNSPSLCR*TLSCVIIQLAR
Trigger: CCTAGCTAATTGAATGATTACGCAGCTCAGAGTCAATCTGCAAAGACTGGGAGAGTTTGTCTTGTTTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464961.1
CDS CAA 72 bp TGCCAAACTGCATTCCACAGCAGCTGTACCACCAATTaGTATTTATGCAAGCAATGTATAAGGGTTCCAATT +
Preference number: 6 (lower is better)
Translates to: CQTAFHSSCTTN*YLCKQCIRVPI
Trigger: AATTGGAACCCTTATACATTGCTTGCATAAATACAAATTGGTGGTACAGCTGCTGTGGAATGCAGTTTGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464961.1
CDS CAA 90 bp TTGAGGAACTGCCAAACTGCATTCCACAGCAGCTGTACCACCAATTaGTATTTATGCAAGCAATGTATAAGGGTTCCAATTTTTGTACAT +
Preference number: 6 (lower is better)
Translates to: LRNCQTAFHSSCTTN*YLCKQCIRVPIFVH
Trigger: ATGTACAAAAATTGGAACCCTTATACATTGCTTGCATAAATACAAATTGGTGGTACAGCTGCTGTGGAATGCAGTTTGGCAGTTCCTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464961.1
CDS CAA 90 bp TACAGAACTAAAAGTAGAACTCCATTTGATCCAGCAATCCCACTATaGGGTATCTACCTCCTTATGAGGATCTTTATGTGCTTCCAATGT +
Preference number: 6 (lower is better)
Translates to: YRTKSRTPFDPAIPL*GIYLLMRIFMCFQC
Trigger: ACATTGGAAGCACATAAAGATCCTCATAAGGAGGTAGATACCCAATAGTGGGATTGCTGGATCAAATGGAGTTCTACTTTTAGTTCTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476251.1
CDS TCA 72 bp CACAAATGTGGTATCAATTTGCTGATGACTAGTGGCTaGGCCCCAAAAATGTTTAAGGTTTCAATAAGACAC +
Preference number: 6 (lower is better)
Translates to: HKCGINLLMTSG*APKMFKVSIRH
Trigger: GTGTCTTATTGAAACCTTAAACATTTTTGGGGCTCAGCCACTAGTCATCAGCAAATTGATACCACATTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000462878.1
ENST00000468888.6
ENST00000682230.1
CDS CCA 72 bp TCATCGAAGCTTTTATCATCTCCCATAGCCATTAGATaGTCCAGGGAGCTCTCTTTTAATATTTACAACAGA +
Preference number: 6 (lower is better)
Translates to: SSKLLSSPIAIR*SRELSFNIYNR
Trigger: TCTGTTGTAAATATTAAAAGAGAGCTCCCTGGACCATCTAATGGCTATGGGAGATGATAAAAGCTTCGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498331.1
CDS TCA 72 bp AAAACCCTCGTTTATTTAGCACAGCCTAGAAGGACTTaGTTAAGATTACTCTTTAGCTGCACATATGCTGTT +
Preference number: 6 (lower is better)
Translates to: KTLVYLAQPRRT*LRLLFSCTYAV
Trigger: AACAGCATATGTGCAGCTAAAGAGTAATCTTAATCAAGTCCTTCTAGGCTGTGCTAAATAAACGAGGGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480013.6
ENST00000650653.1
CDS TCA 72 bp ATATTTTATACATTTCAAAAGGGCATCGTATTCTTCTaGATGTTGCAACAGACTCCAGATCTGCAATCGTGC +
Preference number: 6 (lower is better)
Translates to: IFYTFQKGIVFF*MLQQTPDLQSC
Trigger: GCACGATTGCAGATCTGGAGTCTGTTGCAACATTCAGAAGAATACGATGCCCTTTTGAAATGTATAAAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486796.1
CDS GCA 72 bp GCATTCCACAGCAGCTGTACCACCAATTTGTATTTATaGAAGCAATGTATAAGGGTTCCAATTTTTGTACAT +
Preference number: 6 (lower is better)
Translates to: AFHSSCTTNLYL*KQCIRVPIFVH
Trigger: ATGTACAAAAATTGGAACCCTTATACATTGCTTGCATAAATACAAATTGGTGGTACAGCTGCTGTGGAATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464961.1
CDS CAA 72 bp GGTAAAGCTCCTAATAACATTGTAAACTCTGGGGTATaGAGTTCAAATAATGAAATCAGCACTGACTGTGCT +
Preference number: 6 (lower is better)
Translates to: GKAPNNIVNSGV*SSNNEISTDCA
Trigger: AGCACAGTCAGTGCTGATTTCATTATTTGAACTCAATACCCCAGAGTTTACAATGTTATTAGGAGCTTTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000480385.1
ENST00000494261.1
ENST00000635664.1
ENST00000650653.1
ENST00000682230.1
CDS TCA 72 bp GCTTTTATCTTTGCAGACACTCAAAATCATACCGCCTaGACTTTGCACTTCATCAAATTTGGCAAATATCAT +
Preference number: 6 (lower is better)
Translates to: AFIFADTQNHTA*TLHFIKFGKYH
Trigger: ATGATATTTGCCAAATTTGATGAAGTGCAAAGTTCAGGCGGTATGATTTTGAGTGTCTGCAAAGATAAAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000468888.6
ENST00000682230.1
CDS TCA 72 bp TTTAGTAGTTGTGTCAGCAGTACAAACAACCAATCTTaGAGATCATCTTTGTGGACTTGTATGAAATCCACT +
Preference number: 6 (lower is better)
Translates to: FSSCVSSTNNQS*RSSLWTCMKST
Trigger: AGTGGATTTCATACAAGTCCACAAAGATGATCTTCAAGATTGGTTGTTTGTACTGCTGACACAACTACTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359576.9
ENST00000399362.8
ENST00000461133.8
ENST00000468888.6
ENST00000480013.6
ENST00000635664.1
ENST00000650653.1
ENST00000682230.1