RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CKMT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000131730

Ensembl transcript IDs: ENST00000254035.9, ENST00000424301.6, ENST00000437669.5, ENST00000505060.1, ENST00000505704.1, ENST00000505850.1, ENST00000511719.5, ENST00000513094.5, ENST00000514086.5, ENST00000515238.5, ENST00000515615.5

Found 158 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp AGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAAGGCTCAGCCCACGGATaGTGCGGCCAGTGCGCACCC +
Preference number: 4 (lower is better)
Translates to: RFMSVVPADRLFINWEREGSAHG*CGQCAP
Trigger: GGGTGCGCACTGGCCGCAGCATCCGTGGGCTGAGCC...TTCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR GCA 90 bp CTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGCTCAGCCCACGGATaGTGCGGCCAGTGCGCACCC +
Preference number: 4 (lower is better)
Translates to: LRVEIYVCRTSRQIIYKLGSAHG*CGQCAP
Trigger: GGGTGCGCACTGGCCGCAGCATCCGTGGGCTGAGCC...CAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR GCA 90 bp AAAAACTCTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTAGGCTCAGCCCACGGATaGTGCGGCCAGTGCGCACCC +
Preference number: 4 (lower is better)
Translates to: KNSQSRDLCLSYQQTDYLGSAHG*CGQCAP
Trigger: GGGTGCGCACTGGCCGCAGCATCCGTGGGCTGAGCC...TAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAGAGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR TCA 90 bp GAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGACCTCCCACGTCCTGCTaGGCGCACACAGCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: EIYVCRTSRQIIYKLGKGPPTSC*AHTAKK
Trigger: CTTCTTGGCTGTGTGCGCTCAGCAGGACGTGGGAGG...TCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR GCA 90 bp GAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAGGATGCTGCGGCCAGTaGGCACCCGAGAAGACAGCA +
Preference number: 4 (lower is better)
Translates to: EIYVCRTSRQIIYKLGKGGCCGQ*APEKTA
Trigger: TGCTGTCTTCTCGGGTGCGCACTGGCCGCAGCATCC...TCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR GCA 90 bp GAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAAGCCGCTGCTGGTCCTaGTCCGTCATCTCGGACAGC +
Preference number: 4 (lower is better)
Translates to: EIYVCRTSRQIIYKLGKGSRCWS*SVISDS
Trigger: GCTGTCCGAGATGACGGAGCAGGACCAGCAGCGGCT...TCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR TCA 90 bp AGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAACCTCCCACGTCCTGCTaGGCGCACACAGCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: RFMSVVPADRLFINWEREPPTSC*AHTAKK
Trigger: CTTCTTGGCTGTGTGCGCTCAGCAGGACGTGGGAGG...TTCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR TCA 90 bp AAAAACTCTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTACCTCCCACGTCCTGCTaGGCGCACACAGCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: KNSQSRDLCLSYQQTDYLPPTSC*AHTAKK
Trigger: CTTCTTGGCTGTGTGCGCTCAGCAGGACGTGGGAGG...TAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAGAGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR TCA 90 bp GAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGACATAAATGGCGGGGGTaGGGCACTCGGCCATGCAGT +
Preference number: 4 (lower is better)
Translates to: EIYVCRTSRQIIYKLGKGHKWRG*GTRPCS
Trigger: ACTGCATGGCCGAGTGCCTCACCCCCGCCATTTATG...TCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR TCA 90 bp GAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGATCACCGGCAGACGGTTaGCATCTCCCCTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: EIYVCRTSRQIIYKLGKGSPADG*HLPWFL
Trigger: GAGGAACCAGGGGAGATGTCAACCGTCTGCCGGTGA...TCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424301.6
CDS-3UTR TCA 90 bp GAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAGATGAGTGTCGACCTTaGAGCCGGAGCCTCCCACGT +
Preference number: 4 (lower is better)
Translates to: EIYVCRTSRQIIYKLGKGDECRP*SRSLPR
Trigger: ACGTGGGAGGCTCCGGCTTCAAGGTCGACACTCATC...TCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437669.5
CDS-3UTR GCA 90 bp CTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGATGCTGCGGCCAGTaGGCACCCGAGAAGACAGCA +
Preference number: 4 (lower is better)
Translates to: LRVEIYVCRTSRQIIYKLGCCGQ*APEKTA
Trigger: TGCTGTCTTCTCGGGTGCGCACTGGCCGCAGCATCC...CAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR GCA 90 bp GTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGATGCTGCGGCCAGTaGGCACCCGAGAAGACAGCA +
Preference number: 4 (lower is better)
Translates to: VEIYVCRTSRQIIYKLGKGCCGQ*APEKTA
Trigger: TGCTGTCTTCTCGGGTGCGCACTGGCCGCAGCATCC...CTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR GCA 90 bp GTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGAGCCGCTGCTGGTCCTaGTCCGTCATCTCGGACAGC +
Preference number: 4 (lower is better)
Translates to: VEIYVCRTSRQIIYKLGKSRCWS*SVISDS
Trigger: GCTGTCCGAGATGACGGAGCAGGACCAGCAGCGGCT...CTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp GAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGATCGATGAGCCGCTGCTaGTCCTGCTCCGTCATCTCG +
Preference number: 4 (lower is better)
Translates to: EIYVCRTSRQIIYKLGKGSMSRC*SCSVIS
Trigger: CGAGATGACGGAGCAGGACCAGCAGCGGCTCATCGA...TCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR TCA 90 bp AGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAACATAAATGGCGGGGGTaGGGCACTCGGCCATGCAGT +
Preference number: 4 (lower is better)
Translates to: RFMSVVPADRLFINWEREHKWRG*GTRPCS
Trigger: ACTGCATGGCCGAGTGCCTCACCCCCGCCATTTATG...TTCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR GCA 90 bp CTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAATAGCCTAGGCTaGTCCCGGACCTCGGCACAC +
Preference number: 4 (lower is better)
Translates to: LRVEIYVCRTSRQIIYKLGNSLG*SRTSAH
Trigger: GTGTGCCGAGGTCCGGGAGCAGCCTAGGCTATTTCC...CAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR GCA 90 bp GTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAAATAGCCTAGGCTaGTCCCGGACCTCGGCACAC +
Preference number: 4 (lower is better)
Translates to: VEIYVCRTSRQIIYKLGKGNSLG*SRTSAH
Trigger: GTGTGCCGAGGTCCGGGAGCAGCCTAGGCTATTTCC...CTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp GTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGTCAGCAGGTACCCGGTaGTCAGGACACTGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: VEIYVCRTSRQIIYKLGKSAGTR*SGHWCP
Trigger: TGGGCACCAGTGTCCTGACCACCGGGTACCTGCTGA...CTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp AAAAACTCTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATCAGCAGGTACCCGGTaGTCAGGACACTGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: KNSQSRDLCLSYQQTDYLSAGTR*SGHWCP
Trigger: TGGGCACCAGTGTCCTGACCACCGGGTACCTGCTGA...TAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAGAGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp ATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAAAGTCAGCAGGTACCCGGTaGTCAGGACACTGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: IYVCRTSRQIIYKLGKGKSAGTR*SGHWCP
Trigger: TGGGCACCAGTGTCCTGACCACCGGGTACCTGCTGA...CTTTCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp GTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGTGCTTGCGCAGGTCTaGGTAGTCTGCGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: VEIYVCRTSRQIIYKLGKVLAQV*VVCAWR
Trigger: CCTCCAAGCGCAGACTACCCAGACCTGCGCAAGCAC...CTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp AAAAACTCTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATCGATGAGCCGCTGCTaGTCCTGCTCCGTCATCTCG +
Preference number: 4 (lower is better)
Translates to: KNSQSRDLCLSYQQTDYLSMSRC*SCSVIS
Trigger: CGAGATGACGGAGCAGGACCAGCAGCGGCTCATCGA...TAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAGAGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp AGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAATCGATGAGCCGCTGCTaGTCCTGCTCCGTCATCTCG +
Preference number: 4 (lower is better)
Translates to: RFMSVVPADRLFINWERESMSRC*SCSVIS
Trigger: CGAGATGACGGAGCAGGACCAGCAGCGGCTCATCGA...TTCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR TCA 90 bp GAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGATACTTTTTGCCAAACTaGGGCAGAGGGGGTGGCACC +
Preference number: 4 (lower is better)
Translates to: EIYVCRTSRQIIYKLGKGYFLPN*GRGGGT
Trigger: GGTGCCACCCCCTCTGCCTCAGTTTGGCAAAAAGTA...TCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR GCA 90 bp GTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGTCGGCACACACTTTCTaGCGGTTCAGCAGGTACCCG +
Preference number: 4 (lower is better)
Translates to: VEIYVCRTSRQIIYKLGKSAHTF*RFSRYP
Trigger: CGGGTACCTGCTGAACCGGCAGAAAGTGTGTGCCGA...CTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR GCA 90 bp AGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAATCGGCACACACTTTCTaGCGGTTCAGCAGGTACCCG +
Preference number: 4 (lower is better)
Translates to: RFMSVVPADRLFINWERESAHTF*RFSRYP
Trigger: CGGGTACCTGCTGAACCGGCAGAAAGTGTGTGCCGA...TTCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR GCA 90 bp GAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAAATGTCGTACACATCTaGGACCGCGGCAGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: EIYVCRTSRQIIYKLGKGNVVHI*DRGSVH
Trigger: GTGGACACTGCCGCGGTCGCAGATGTGTACGACATT...TCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp GAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGACCAGCGTGTAGCCGTTaGGTGTCACCTTGTTGCGAA +
Preference number: 4 (lower is better)
Translates to: EIYVCRTSRQIIYKLGKGPACSR*VSPCCE
Trigger: TTCGCAACAAGGTGACACCCAACGGCTACACGCTGG...TCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR TCA 90 bp ATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAAAGTACTTTTTGCCAAACTaGGGCAGAGGGGGTGGCACC +
Preference number: 4 (lower is better)
Translates to: IYVCRTSRQIIYKLGKGKYFLPN*GRGGGT
Trigger: GGTGCCACCCCCTCTGCCTCAGTTTGGCAAAAAGTA...CTTTCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR TCA 90 bp AGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAATACTTTTTGCCAAACTaGGGCAGAGGGGGTGGCACC +
Preference number: 4 (lower is better)
Translates to: RFMSVVPADRLFINWEREYFLPN*GRGGGT
Trigger: GGTGCCACCCCCTCTGCCTCAGTTTGGCAAAAAGTA...TTCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR GCA 90 bp AGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAAAATGTCGTACACATCTaGGACCGCGGCAGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: RFMSVVPADRLFINWERENVVHI*DRGSVH
Trigger: GTGGACACTGCCGCGGTCGCAGATGTGTACGACATT...TTCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR GCA 90 bp ATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAAAGTGGCCTGCTGGCCTATaGTGTGGAGGACTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: IYVCRTSRQIIYKLGKGKWPAGL*CGGLAE
Trigger: TTCTGCAAGTCCTCCACAGCATAGGCCAGCAGGCCA...CTTTCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424301.6
CDS-3UTR CCA 90 bp ATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAAAGCCAGCGTGTAGCCGTTaGGTGTCACCTTGTTGCGAA +
Preference number: 4 (lower is better)
Translates to: IYVCRTSRQIIYKLGKGKPACSR*VSPCCE
Trigger: TTCGCAACAAGGTGACACCCAACGGCTACACGCTGG...CTTTCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp CTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGTTGTCCACTCCAGTCTaGATGCACTGGTCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: LRVEIYVCRTSRQIIYKLLSTPV*MHWSSV
Trigger: CACGCTGGACCAGTGCATCCAGACTGGAGTGGACAA...CAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp AAAAACTCTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATTGTCCACTCCAGTCTaGATGCACTGGTCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: KNSQSRDLCLSYQQTDYLLSTPV*MHWSSV
Trigger: CACGCTGGACCAGTGCATCCAGACTGGAGTGGACAA...TAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAGAGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp GAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAGTCCTTGCTGAGCTTTaGGATCCTAACGTGGACACC +
Preference number: 4 (lower is better)
Translates to: EIYVCRTSRQIIYKLGKGVLAEL*DPNVDT
Trigger: GGTGTCCACGTTAGGATCCCAAAGCTCAGCAAGGAC...TCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp CTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGCTGAGGCAGAGGGGGTaGCACCTTAATATCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LRVEIYVCRTSRQIIYKLLRQRG*HLNILA
Trigger: GGCCAAGATATTAAGGTGCCACCCCCTCTGCCTCAG...CAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp GTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGCTGAGGCAGAGGGGGTaGCACCTTAATATCTTGGCC +
Preference number: 4 (lower is better)
Translates to: VEIYVCRTSRQIIYKLGKLRQRG*HLNILA
Trigger: GGCCAAGATATTAAGGTGCCACCCCCTCTGCCTCAG...CTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp AGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAACTGAGGCAGAGGGGGTaGCACCTTAATATCTTGGCC +
Preference number: 4 (lower is better)
Translates to: RFMSVVPADRLFINWERELRQRG*HLNILA
Trigger: GGCCAAGATATTAAGGTGCCACCCCCTCTGCCTCAG...TTCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR GCA 90 bp AAAAACTCTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATCCAGATCCGTTGTGTaGTTCATCACCCTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: KNSQSRDLCLSYQQTDYLSRSVV*FITLGS
Trigger: TGACCCCAGGGTGATGAAGCACACAACGGATCTGGA...TAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAGAGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR GCA 90 bp AGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAATCCAGATCCGTTGTGTaGTTCATCACCCTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: RFMSVVPADRLFINWERESRSVV*FITLGS
Trigger: TGACCCCAGGGTGATGAAGCACACAACGGATCTGGA...TTCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp AGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAAGGCCATCCTTCCTCTTaGATGAGTGTCTTGAAGCCG +
Preference number: 4 (lower is better)
Translates to: RFMSVVPADRLFINWEREGHPSS*MSVLKP
Trigger: CGGCTTCAAGACACTCATCCAAGAGGAAGGATGGCC...TTCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254035.9
CDS-3UTR CCA 90 bp AAAAACTCTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATGTGCTTCATCACCCTaGGGTCATAGCCGTTGTGTC +
Preference number: 4 (lower is better)
Translates to: KNSQSRDLCLSYQQTDYLCASSP*GHSRCV
Trigger: GACACAACGGCTATGACCCCAGGGTGATGAAGCACA...TAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAGAGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp GTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGTGTGCTTCATCACCCTaGGGTCATAGCCGTTGTGTC +
Preference number: 4 (lower is better)
Translates to: VEIYVCRTSRQIIYKLGKCASSP*GHSRCV
Trigger: GACACAACGGCTATGACCCCAGGGTGATGAAGCACA...CTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp GAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGATCGTCGAACTGCCCTTaGGTGATCTTTGATGCATCC +
Preference number: 4 (lower is better)
Translates to: EIYVCRTSRQIIYKLGKGSSNCP*VIFDAS
Trigger: GGATGCATCAAAGATCACCCAAGGGCAGTTCGACGA...TCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp ATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAAAGGTCCTTGCTGAGCTTTaGGATCCTAACGTGGACACC +
Preference number: 4 (lower is better)
Translates to: IYVCRTSRQIIYKLGKGKVLAEL*DPNVDT
Trigger: GGTGTCCACGTTAGGATCCCAAAGCTCAGCAAGGAC...CTTTCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp AGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAAGTCCTTGCTGAGCTTTaGGATCCTAACGTGGACACC +
Preference number: 4 (lower is better)
Translates to: RFMSVVPADRLFINWEREVLAEL*DPNVDT
Trigger: GGTGTCCACGTTAGGATCCCAAAGCTCAGCAAGGAC...TTCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp AGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAAGGCCATCCTTCCTCTTaGATGAGTGTCTCACTTGGC +
Preference number: 4 (lower is better)
Translates to: RFMSVVPADRLFINWEREGHPSS*MSVSLG
Trigger: GCCAAGTGAGACACTCATCCAAGAGGAAGGATGGCC...TTCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424301.6
CDS-3UTR CCA 90 bp GAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAGGCCATCCTTCCTCTTaGATGAGTGTCGACCTTGAA +
Preference number: 4 (lower is better)
Translates to: EIYVCRTSRQIIYKLGKGGHPSS*MSVDLE
Trigger: TTCAAGGTCGACACTCATCCAAGAGGAAGGATGGCC...TCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437669.5
CDS-3UTR TCA 90 bp AGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAACCCTTGGGTGATCTTTaGTGCATCCAGATCCGTTGT +
Preference number: 4 (lower is better)
Translates to: RFMSVVPADRLFINWEREPLGDL*CIQIRC
Trigger: ACAACGGATCTGGATGCATCAAAGATCACCCAAGGG...TTCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR TCA 90 bp ATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAAAGCCCTTGGGTGATCTTTaGTGCATCCAGATCCGTTGT +
Preference number: 4 (lower is better)
Translates to: IYVCRTSRQIIYKLGKGKPLGDL*CIQIRC
Trigger: ACAACGGATCTGGATGCATCAAAGATCACCCAAGGG...CTTTCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR TCA 90 bp CTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGCCCTTGGGTGATCTTTaGTGCATCCAGATCCGTTGT +
Preference number: 4 (lower is better)
Translates to: LRVEIYVCRTSRQIIYKLPLGDL*CIQIRC
Trigger: ACAACGGATCTGGATGCATCAAAGATCACCCAAGGG...CAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR TCA 90 bp GAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAGCCTCCTTTTTCCATTaGGATTACCCTGGTGTGATC +
Preference number: 4 (lower is better)
Translates to: EIYVCRTSRQIIYKLGKGASFFH*DYPGVI
Trigger: GATCACACCAGGGTAATCTCAATGGAAAAAGGAGGC...TCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR TCA 90 bp AAAAACTCTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTACCAACCCGTTTAGTGTaGAACGGGACAAAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: KNSQSRDLCLSYQQTDYLPTRLV*NGTKGN
Trigger: GTTTCCCTTTGTCCCGTTTCACACTAAACGGGTTGG...TAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAGAGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424301.6
CDS-3UTR CCA 90 bp AAAAACTCTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATCGTCGAACTGCCCTTaGGTGATCTTTGATGCATCC +
Preference number: 4 (lower is better)
Translates to: KNSQSRDLCLSYQQTDYLSSNCP*VIFDAS
Trigger: GGATGCATCAAAGATCACCCAAGGGCAGTTCGACGA...TAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAGAGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp GTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGTCGTCGAACTGCCCTTaGGTGATCTTTGATGCATCC +
Preference number: 4 (lower is better)
Translates to: VEIYVCRTSRQIIYKLGKSSNCP*VIFDAS
Trigger: GGATGCATCAAAGATCACCCAAGGGCAGTTCGACGA...CTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp GTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGTTTGGGATCCTAACGTaGACACCAGCTCGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: VEIYVCRTSRQIIYKLGKFGILT*TPARSP
Trigger: AGGACTACGAGCTGGTGTCCACGTTAGGATCCCAAA...CTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp ATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAAAGTTTGGGATCCTAACGTaGACACCAGCTCGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: IYVCRTSRQIIYKLGKGKFGILT*TPARSP
Trigger: AGGACTACGAGCTGGTGTCCACGTTAGGATCCCAAA...CTTTCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR TCA 90 bp ATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAAAGGAGATTACCCTGGTGTaGTCCTCCTCATTTATCCAG +
Preference number: 4 (lower is better)
Translates to: IYVCRTSRQIIYKLGKGKEITLV*SSSFIQ
Trigger: CTGGATAAATGAGGAGGATCACACCAGGGTAATCTC...CTTTCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR TCA 90 bp AAAAACTCTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTAGAGATTACCCTGGTGTaGTCCTCCTCATTTATCCAG +
Preference number: 4 (lower is better)
Translates to: KNSQSRDLCLSYQQTDYLEITLV*SSSFIQ
Trigger: CTGGATAAATGAGGAGGATCACACCAGGGTAATCTC...TAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAGAGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR TCA 90 bp AGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAAGAGATTACCCTGGTGTaGTCCTCCTCATTTATCCAG +
Preference number: 4 (lower is better)
Translates to: RFMSVVPADRLFINWEREEITLV*SSSFIQ
Trigger: CTGGATAAATGAGGAGGATCACACCAGGGTAATCTC...TTCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR TCA 90 bp AAAAACTCTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTAGCCTCCTTTTTCCATTaGGATTACCCTGGTGTGATC +
Preference number: 4 (lower is better)
Translates to: KNSQSRDLCLSYQQTDYLASFFH*DYPGVI
Trigger: GATCACACCAGGGTAATCTCAATGGAAAAAGGAGGC...TAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAGAGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR TCA 90 bp GTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGCCTCCTTTTTCCATTaGGATTACCCTGGTGTGATC +
Preference number: 4 (lower is better)
Translates to: VEIYVCRTSRQIIYKLGKASFFH*DYPGVI
Trigger: GATCACACCAGGGTAATCTCAATGGAAAAAGGAGGC...CTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR TCA 90 bp GAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGACCATCGATGACTATCTaGACAAGCTCAACCTCTGAT +
Preference number: 4 (lower is better)
Translates to: EIYVCRTSRQIIYKLGKGPSMTI*TSSTSD
Trigger: ATCAGAGGTTGAGCTTGTTCAGATAGTCATCGATGG...TCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR TCA 90 bp AAAAACTCTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTAATCCTTCCTCTTGGATaGGTGTCTCACTTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: KNSQSRDLCLSYQQTDYLILPLG*VSHLAC
Trigger: ACAAGCCAAGTGAGACACTCATCCAAGAGGAAGGAT...TAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAGAGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424301.6
CDS-3UTR GCA 90 bp AAAAACTCTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATGGGTGTCACCTTGTTaGGAAGCTTGGCATAAATGG +
Preference number: 4 (lower is better)
Translates to: KNSQSRDLCLSYQQTDYLWVSPC*EAWHKW
Trigger: CCATTTATGCCAAGCTTCGCAACAAGGTGACACCCA...TAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAGAGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp GAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGATTATCAAACAGAAAGTaGTCATCGATGAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: EIYVCRTSRQIIYKLGKGLSNRK*SSMSRC
Trigger: GCAGCGGCTCATCGATGACCACTTTCTGTTTGATAA...TCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp CTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGATCTTAGAAAAGCGTaGGTCCTTGCTGAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: LRVEIYVCRTSRQIIYKLDLRKA*VLAELW
Trigger: CCAAAGCTCAGCAAGGACCCACGCTTTTCTAAGATC...CAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp AAAAACTCTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTAGATCTTAGAAAAGCGTaGGTCCTTGCTGAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: KNSQSRDLCLSYQQTDYLDLRKA*VLAELW
Trigger: CCAAAGCTCAGCAAGGACCCACGCTTTTCTAAGATC...TAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAGAGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp AGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAATGCTGGCCTATGCTGTaGAGGACTTGCAGAAAACTT +
Preference number: 4 (lower is better)
Translates to: RFMSVVPADRLFINWERECWPML*RTCRKL
Trigger: AAGTTTTCTGCAAGTCCTCCACAGCATAGGCCAGCA...TTCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424301.6
CDS-3UTR CCA 90 bp CTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGTCTGTTAGTGAAAAGTaGCCTGCTGGCCTATGCTGT +
Preference number: 4 (lower is better)
Translates to: LRVEIYVCRTSRQIIYKLSVSEK*PAGLCC
Trigger: ACAGCATAGGCCAGCAGGCCACTTTTCACTAACAGA...CAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424301.6
CDS-3UTR TCA 90 bp GTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGCCATCGATGACTATCTaGACAAGCTCAACCTCTGAT +
Preference number: 4 (lower is better)
Translates to: VEIYVCRTSRQIIYKLGKPSMTI*TSSTSD
Trigger: ATCAGAGGTTGAGCTTGTTCAGATAGTCATCGATGG...CTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR TCA 90 bp AAAAACTCTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTACCATCGATGACTATCTaGACAAGCTCAACCTCTGAT +
Preference number: 4 (lower is better)
Translates to: KNSQSRDLCLSYQQTDYLPSMTI*TSSTSD
Trigger: ATCAGAGGTTGAGCTTGTTCAGATAGTCATCGATGG...TAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAGAGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp AAAAACTCTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATTATCAAACAGAAAGTaGTCATCGATGAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: KNSQSRDLCLSYQQTDYLLSNRK*SSMSRC
Trigger: GCAGCGGCTCATCGATGACCACTTTCTGTTTGATAA...TAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAGAGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp CTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGTTATCAAACAGAAAGTaGTCATCGATGAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: LRVEIYVCRTSRQIIYKLLSNRK*SSMSRC
Trigger: GCAGCGGCTCATCGATGACCACTTTCTGTTTGATAA...CAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp AAAAACTCTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATCCCAGCCTCGTTCTTaGATTAACCGTTCTACTTCT +
Preference number: 4 (lower is better)
Translates to: KNSQSRDLCLSYQQTDYLSQPRS*INRSTS
Trigger: AGAAGTAGAACGGTTAATCCAAGAACGAGGCTGGGA...TAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAGAGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp GTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGTCCCAGCCTCGTTCTTaGATTAACCGTTCTACTTCT +
Preference number: 4 (lower is better)
Translates to: VEIYVCRTSRQIIYKLGKSQPRS*INRSTS
Trigger: AGAAGTAGAACGGTTAATCCAAGAACGAGGCTGGGA...CTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp CTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGTCCCAGCCTCGTTCTTaGATTAACCGTTCTACTTCT +
Preference number: 4 (lower is better)
Translates to: LRVEIYVCRTSRQIIYKLSQPRS*INRSTS
Trigger: AGAAGTAGAACGGTTAATCCAAGAACGAGGCTGGGA...CAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR TCA 90 bp GTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGTCTCACTTGGCTTGTaGCTTCTGTTAGTGAAAAGT +
Preference number: 4 (lower is better)
Translates to: VEIYVCRTSRQIIYKLGKVSLGL*LLLVKS
Trigger: ACTTTTCACTAACAGAAGTCACAAGCCAAGTGAGAC...CTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424301.6
CDS-3UTR CCA 90 bp ATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAAAGGGCACCTTAATATCTTaGCCTCTCTCCAACTTCTTT +
Preference number: 4 (lower is better)
Translates to: IYVCRTSRQIIYKLGKGKGTLIS*PLSNFF
Trigger: AAAGAAGTTGGAGAGAGGCCAAGATATTAAGGTGCC...CTTTCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp CTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGCACCTTAATATCTTaGCCTCTCTCCAACTTCTTT +
Preference number: 4 (lower is better)
Translates to: LRVEIYVCRTSRQIIYKLGTLIS*PLSNFF
Trigger: AAAGAAGTTGGAGAGAGGCCAAGATATTAAGGTGCC...CAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp GTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGATGAGTGTCTCACTTaGCTTGTGACTTCTGTTAGT +
Preference number: 4 (lower is better)
Translates to: VEIYVCRTSRQIIYKLGKDECLT*LVTSVS
Trigger: ACTAACAGAAGTCACAAGCCAAGTGAGACACTCATC...CTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424301.6
CDS-3UTR TCA 90 bp ATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAAAGAACAAGCTCAACCTCTaGTCGACCAATTCTATCTAT +
Preference number: 4 (lower is better)
Translates to: IYVCRTSRQIIYKLGKGKNKLNL*STNSIY
Trigger: ATAGATAGAATTGGTCGATCAGAGGTTGAGCTTGTT...CTTTCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR TCA 90 bp AAAAACTCTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTAAACAAGCTCAACCTCTaGTCGACCAATTCTATCTAT +
Preference number: 4 (lower is better)
Translates to: KNSQSRDLCLSYQQTDYLNKLNL*STNSIY
Trigger: ATAGATAGAATTGGTCGATCAGAGGTTGAGCTTGTT...TAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAGAGTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp CTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGCAATTCTATCTATGTTaGAAATGTCGTACACATCTG +
Preference number: 4 (lower is better)
Translates to: LRVEIYVCRTSRQIIYKLQFYLC*KCRTHL
Trigger: CAGATGTGTACGACATTTCCAACATAGATAGAATTG...CAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CCA 90 bp GTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGCAATTCTATCTATGTTaGAAATGTCGTACACATCTG +
Preference number: 4 (lower is better)
Translates to: VEIYVCRTSRQIIYKLGKQFYLC*KCRTHL
Trigger: CAGATGTGTACGACATTTCCAACATAGATAGAATTG...CTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTAC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS GCA 90 bp GGAGGAAATAGCCTAGGCTGCTCCCGGACCTCGGCACACACTTTCTaGCGGTTCAGCAGGTACCCGGTGGTCAGGACACTGGTGCCCATG +
Preference number: 5 (lower is better)
Translates to: GGNSLGCSRTSAHTF*RFSRYPVVRTLVPM
Trigger: CATGGGCACCAGTGTCCTGACCACCGGGTACCTGCTGAACCGGCAGAAAGTGTGTGCCGAGGTCCGGGAGCAGCCTAGGCTATTTCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
ENST00000505060.1
ENST00000505704.1
ENST00000511719.5
ENST00000513094.5
ENST00000515238.5
ENST00000515615.5
CDS CCA 90 bp GGTCACTGTGGCCAGCCTCGGACCATGGTCCTGCCACAGCCACAGTaGGTTCTAATCGCCAATCTGCAGTTTCCCTGGGGACCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: GHCGQPRTMVLPQPQ*VLIANLQFPWGPSG
Trigger: GCCTGAGGGTCCCCAGGGAAACTGCAGATTGGCGATTAGAACCCACTGTGGCTGTGGCAGGACCATGGTCCGAGGCTGGCCACAGTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514086.5
CDS TCA 90 bp GCACCCGAGAAGACAGCACGTAATGCTCGTCGAACTGCCCTTGGGTaGTCTGCCAAGCAGACTGTGGGGTCACTGTGGCCAGCCTCGGAC +
Preference number: 5 (lower is better)
Translates to: APEKTARNARRTALG*SAKQTVGSLWPASD
Trigger: GTCCGAGGCTGGCCACAGTGACCCCACAGTCTGCTTGGCAGATCACCCAAGGGCAGTTCGACGAGCATTACGTGCTGTCTTCTCGGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514086.5
CDS CCA 90 bp GTAATGCTCGTCGAACTGCCCTTGGGTGATCTGCCAAGCAGACTGTaGGGTCACTGTGGCCAGCCTCGGACCATGGTCCTGCCACAGCCA +
Preference number: 5 (lower is better)
Translates to: VMLVELPLGDLPSRL*GHCGQPRTMVLPQP
Trigger: TGGCTGTGGCAGGACCATGGTCCGAGGCTGGCCACAGTGACCCCACAGTCTGCTTGGCAGATCACCCAAGGGCAGTTCGACGAGCATTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514086.5
CDS GCA 90 bp GCCAATCTGCAGTTTCCCTGGGGACCCTCAGGCACTGTGCACGACTaGACAATCCGTAAATTGGACACATTCCGGAAGTCTTGGGGCACG +
Preference number: 5 (lower is better)
Translates to: ANLQFPWGPSGTVHD*TIRKLDTFRKSWGT
Trigger: CGTGCCCCAAGACTTCCGGAATGTGTCCAATTTACGGATTGTGCAGTCGTGCACAGTGCCTGAGGGTCCCCAGGGAAACTGCAGATTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514086.5
CDS CCA 90 bp CACAAAGCAGTCGCATCTGAGCTGATCCTGGCCCATCAGGGCCACTaGGCACATAACAGTACCTTGCTGAGCTTTGGGATCCTAACGTGG +
Preference number: 5 (lower is better)
Translates to: HKAVASELILAHQGH*AHNSTLLSFGILTW
Trigger: CCACGTTAGGATCCCAAAGCTCAGCAAGGTACTGTTATGTGCCCAGTGGCCCTGATGGGCCAGGATCAGCTCAGATGCGACTGCTTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505850.1
CDS CCA 90 bp CTGCCACAGCCACAGTGGGTTCTAATCGCCAATCTGCAGTTTCCCTaGGGACCCTCAGGCACTGTGCACGACTGCACAATCCGTAAATTG +
Preference number: 5 (lower is better)
Translates to: LPQPQWVLIANLQFP*GPSGTVHDCTIRKL
Trigger: CAATTTACGGATTGTGCAGTCGTGCACAGTGCCTGAGGGTCCCCAGGGAAACTGCAGATTGGCGATTAGAACCCACTGTGGCTGTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514086.5
CDS GCA 90 bp ACTTGGCTTGTGACTTCTGTTAGTGAAAAGTGGCCTGCTGGCCTATaGTGTGGAGGACTTGCAGAAAACTTCCCAGTCACCGGCAGACGG +
Preference number: 5 (lower is better)
Translates to: TWLVTSVSEKWPAGL*CGGLAENFPVTGRR
Trigger: CCGTCTGCCGGTGACTGGGAAGTTTTCTGCAAGTCCTCCACAGCATAGGCCAGCAGGCCACTTTTCACTAACAGAAGTCACAAGCCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424301.6
CDS GCA 90 bp CTTTCATTTCATCACAGAAGGATCCTTGGAGGAAATAGCCTAGGCTaGTCCCGGACCTCGGCACACACTTTCTGCCGGTTCAGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: LSFHHRRILGGNSLG*SRTSAHTFCRFSRY
Trigger: GTACCTGCTGAACCGGCAGAAAGTGTGTGCCGAGGTCCGGGAGCAGCCTAGGCTATTTCCTCCAAGGATCCTTCTGTGATGAAATGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505704.1
CDS CCA 90 bp CACTGGGCACATAACAGTACCTTGCTGAGCTTTGGGATCCTAACGTaGACACCAGCTCGTAGTCCTGTTCCAAGGTTCGAAGGACAGGTC +
Preference number: 5 (lower is better)
Translates to: HWAHNSTLLSFGILT*TPARSPVPRFEGQV
Trigger: GACCTGTCCTTCGAACCTTGGAACAGGACTACGAGCTGGTGTCCACGTTAGGATCCCAAAGCTCAGCAAGGTACTGTTATGTGCCCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505850.1
CDS TCA 90 bp TCTGCTCAGCGCATGGTATCTCATCCATGGCAGGGTTCCAAGGGCTaGGAAAACACATCTATTTTCATCCCTCTCGTGCCACTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: SAQRMVSHPWQGSKG*ENTSIFIPLVPLLH
Trigger: GTGGAGGAGTGGCACGAGAGGGATGAAAATAGATGTGTTTTCTCAGCCCTTGGAACCCTGCCATGGATGAGATACCATGCGCTGAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505704.1
CDS CCA 90 bp ATCTTAGAAAAGCGTGGGTCCTTGCTGAGCTTTGGGATCCTAACGTaGACACCAGCTCGTAGTCCTGTTCCAAGGTTCGAAGGACAGGTC +
Preference number: 5 (lower is better)
Translates to: ILEKRGSLLSFGILT*TPARSPVPRFEGQV
Trigger: GACCTGTCCTTCGAACCTTGGAACAGGACTACGAGCTGGTGTCCACGTTAGGATCCCAAAGCTCAGCAAGGACCCACGCTTTTCTAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
ENST00000514086.5
CDS TCA 90 bp CAGACGGTTGACATCTCCCCTGGTTCCTCCCCAACCCGTTTAGTGTaGAACGGGACAAAGGGAAACATTTCCTTTGATCTTGAAGCCGGA +
Preference number: 5 (lower is better)
Translates to: QTVDISPGSSPTRLV*NGTKGNISFDLEAG
Trigger: TCCGGCTTCAAGATCAAAGGAAATGTTTCCCTTTGTCCCGTTTCACACTAAACGGGTTGGGGAGGAACCAGGGGAGATGTCAACCGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424301.6
CDS CCA 90 bp TGCCTATGTGGAATTCTGCATGCCACTCAAACTCTGCTCAGCGCATaGTATCTCATCCATGGCAGGGTTCCAAGGGCTGAGAAAACACAT +
Preference number: 5 (lower is better)
Translates to: CLCGILHATQTLLSA*YLIHGRVPRAEKTH
Trigger: ATGTGTTTTCTCAGCCCTTGGAACCCTGCCATGGATGAGATACCATGCGCTGAGCAGAGTTTGAGTGGCATGCAGAATTCCACATAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505704.1
CDS GCA 90 bp AGGGTTCCAAGGGCTGAGAAAACACATCTATTTTCATCCCTCTCGTaGCACTCCTCCACTTTCCATCTGCAGTGTCCTTTAGAGCCGATA +
Preference number: 5 (lower is better)
Translates to: RVPRAEKTHLFSSLS*HSSTFHLQCPLEPI
Trigger: TATCGGCTCTAAAGGACACTGCAGATGGAAAGTGGAGGAGTGGCACGAGAGGGATGAAAATAGATGTGTTTTCTCAGCCCTTGGAACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505704.1
CDS CCA 90 bp CTATCTGAACAAGCTCAACCTCTGATCGACCAATTCTATCTATGTTaGAAATGTCGTACACATCTGCGACCGCGGCAGTGTCCACACCAC +
Preference number: 5 (lower is better)
Translates to: LSEQAQPLIDQFYLC*KCRTHLRPRQCPHH
Trigger: GTGGTGTGGACACTGCCGCGGTCGCAGATGTGTACGACATTTCCAACATAGATAGAATTGGTCGATCAGAGGTTGAGCTTGTTCAGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
ENST00000514086.5
CDS CCA 90 bp TTGGATGAGTGTCTCACTTGGCTTGTGACTTCTGTTAGTGAAAAGTaGCCTGCTGGCCTATGCTGTGGAGGACTTGCAGAAAACTTCCCA +
Preference number: 5 (lower is better)
Translates to: LDECLTWLVTSVSEK*PAGLCCGGLAENFP
Trigger: TGGGAAGTTTTCTGCAAGTCCTCCACAGCATAGGCCAGCAGGCCACTTTTCACTAACAGAAGTCACAAGCCAAGTGAGACACTCATCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424301.6
CDS CCA 90 bp GTGCACGACTGCACAATCCGTAAATTGGACACATTCCGGAAGTCTTaGGGCACGGACCTTCGACTAGTAAAGGGGAAAGCTGTTTTATAT +
Preference number: 5 (lower is better)
Translates to: VHDCTIRKLDTFRKS*GTDLRLVKGKAVLY
Trigger: ATATAAAACAGCTTTCCCCTTTACTAGTCGAAGGTCCGTGCCCCAAGACTTCCGGAATGTGTCCAATTTACGGATTGTGCAGTCGTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514086.5
CDS-3UTR CAA 90 bp GAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAGTCACCGGCAGACGGTaGACATCTCCCCTGGTTCCT +
Preference number: 5 (lower is better)
Translates to: EIYVCRTSRQIIYKLGKGVTGRR*TSPLVP
Trigger: AGGAACCAGGGGAGATGTCAACCGTCTGCCGGTGAC...TCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424301.6
CDS-3UTR CAA 90 bp GTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGTCTTGGATGAGTGTCTaGAAGCCGGAGCCTCCCACG +
Preference number: 5 (lower is better)
Translates to: VEIYVCRTSRQIIYKLGKSWMSV*KPEPPT
Trigger: CGTGGGAGGCTCCGGCTTCAAGACACTCATCCAAGA...CTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254035.9
CDS TCA 90 bp CTGGAATCAGGGGGCCTGGATTTGCATTTCGCTGTACTAGCTATGTaGACTTGGGCACTGTTTAATTTTTCTAGGCTTTCATTTCATCAC +
Preference number: 5 (lower is better)
Translates to: LESGGLDLHFAVLAM*TWALFNFSRLSFHH
Trigger: GTGATGAAATGAAAGCCTAGAAAAATTAAACAGTGCCCAAGTTCACATAGCTAGTACAGCGAAATGCAAATCCAGGCCCCCTGATTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000505704.1
CDS-3UTR CAA 90 bp GAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAATGCATCCAGATCCGTaGTGTGCTTCATCACCCTGG +
Preference number: 5 (lower is better)
Translates to: EIYVCRTSRQIIYKLGKGMHPDP*CASSPW
Trigger: CCAGGGTGATGAAGCACACAACGGATCTGGATGCAT...TCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CAA 90 bp GTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGTGGCCATCCTTCCTCTaGGATGAGTGTCTTGAAGCC +
Preference number: 5 (lower is better)
Translates to: VEIYVCRTSRQIIYKLGKWPSFL*DECLEA
Trigger: GGCTTCAAGACACTCATCCAAGAGGAAGGATGGCCA...CTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254035.9
CDS-3UTR CAA 90 bp AAAAACTCTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTAATGCATCCAGATCCGTaGTGTGCTTCATCACCCTGG +
Preference number: 5 (lower is better)
Translates to: KNSQSRDLCLSYQQTDYLMHPDP*CASSPW
Trigger: CCAGGGTGATGAAGCACACAACGGATCTGGATGCAT...TAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAGAGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CAA 90 bp ATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAAAGGAAAAGCGTGGGTCCTaGCTGAGCTTTGGGATCCTA +
Preference number: 5 (lower is better)
Translates to: IYVCRTSRQIIYKLGKGKEKRGS*LSFGIL
Trigger: TAGGATCCCAAAGCTCAGCAAGGACCCACGCTTTTC...CTTTCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CAA 90 bp CTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGAAAAGCGTGGGTCCTaGCTGAGCTTTGGGATCCTA +
Preference number: 5 (lower is better)
Translates to: LRVEIYVCRTSRQIIYKLEKRGS*LSFGIL
Trigger: TAGGATCCCAAAGCTCAGCAAGGACCCACGCTTTTC...CAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CAA 90 bp GTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGACATTTCCTTTGATCTaGAAGCCGGAGCCTCCCACG +
Preference number: 5 (lower is better)
Translates to: VEIYVCRTSRQIIYKLGKTFPLI*KPEPPT
Trigger: CGTGGGAGGCTCCGGCTTCAAGATCAAAGGAAATGT...CTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424301.6
CDS-3UTR CAA 90 bp CTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGTGGCCATCCTTCCTCTaGGATGAGTGTCTCACTTGG +
Preference number: 5 (lower is better)
Translates to: LRVEIYVCRTSRQIIYKLWPSFL*DECLTW
Trigger: CCAAGTGAGACACTCATCCAAGAGGAAGGATGGCCA...CAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424301.6
CDS-3UTR CAA 90 bp AAAAACTCTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTAAACAGCAGAGAAGCATaGCGGCCAGTTAGCAACTTA +
Preference number: 5 (lower is better)
Translates to: KNSQSRDLCLSYQQTDYLNSREA*RPVSNL
Trigger: TAAGTTGCTAACTGGCCGCAATGCTTCTCTGCTGTT...TAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAGAGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CAA 90 bp GTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGAACAGCAGAGAAGCATaGCGGCCAGTTAGCAACTTA +
Preference number: 5 (lower is better)
Translates to: VEIYVCRTSRQIIYKLGKNSREA*RPVSNL
Trigger: TAAGTTGCTAACTGGCCGCAATGCTTCTCTGCTGTT...CTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CAA 90 bp ATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAAAGAACAGCAGAGAAGCATaGCGGCCAGTTAGCAACTTA +
Preference number: 5 (lower is better)
Translates to: IYVCRTSRQIIYKLGKGKNSREA*RPVSNL
Trigger: TAAGTTGCTAACTGGCCGCAATGCTTCTCTGCTGTT...CTTTCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CAA 90 bp CTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGCCGTTGTGTCTTAGTTaGATGACGGGGTCAAAAAGG +
Preference number: 5 (lower is better)
Translates to: LRVEIYVCRTSRQIIYKLPLCLS*MTGSKR
Trigger: CCTTTTTGACCCCGTCATCAAACTAAGACACAACGG...CAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CAA 90 bp ATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAAAGCCGTTGTGTCTTAGTTaGATGACGGGGTCAAAAAGG +
Preference number: 5 (lower is better)
Translates to: IYVCRTSRQIIYKLGKGKPLCLS*MTGSKR
Trigger: CCTTTTTGACCCCGTCATCAAACTAAGACACAACGG...CTTTCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CAA 90 bp CTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGAGGGAAACATTTCCTTaGATCTTGAAGCCGGAGCCT +
Preference number: 5 (lower is better)
Translates to: LRVEIYVCRTSRQIIYKLRETFP*ILKPEP
Trigger: AGGCTCCGGCTTCAAGATCAAAGGAAATGTTTCCCT...CAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424301.6
CDS-3UTR CAA 90 bp AAAAACTCTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATATGCTGTGGAGGACTaGCAGAAAACTTCCCAGTCA +
Preference number: 5 (lower is better)
Translates to: KNSQSRDLCLSYQQTDYLYAVED*QKTSQS
Trigger: TGACTGGGAAGTTTTCTGCAAGTCCTCCACAGCATA...TAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAGAGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424301.6
CDS-3UTR CAA 90 bp ATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAAAGTGCCTCCTTTTTCCATaGAGATTACCCTGGTGTGAT +
Preference number: 5 (lower is better)
Translates to: IYVCRTSRQIIYKLGKGKCLLFP*RLPWCD
Trigger: ATCACACCAGGGTAATCTCAATGGAAAAAGGAGGCA...CTTTCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CAA 90 bp AAAAACTCTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATGCCTCCTTTTTCCATaGAGATTACCCTGGTGTGAT +
Preference number: 5 (lower is better)
Translates to: KNSQSRDLCLSYQQTDYLCLLFP*RLPWCD
Trigger: ATCACACCAGGGTAATCTCAATGGAAAAAGGAGGCA...TAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAGAGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CAA 90 bp AAAAACTCTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTAAATACTCGTTTCATATaGCCTCCTTTTTCCATTGAG +
Preference number: 5 (lower is better)
Translates to: KNSQSRDLCLSYQQTDYLNTRFI*PPFSIE
Trigger: CTCAATGGAAAAAGGAGGCAATATGAAACGAGTATT...TAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAGAGTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CAA 90 bp GTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGAATACTCGTTTCATATaGCCTCCTTTTTCCATTGAG +
Preference number: 5 (lower is better)
Translates to: VEIYVCRTSRQIIYKLGKNTRFI*PPFSIE
Trigger: CTCAATGGAAAAAGGAGGCAATATGAAACGAGTATT...CTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CAA 90 bp CTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGAATACTCGTTTCATATaGCCTCCTTTTTCCATTGAG +
Preference number: 5 (lower is better)
Translates to: LRVEIYVCRTSRQIIYKLNTRFI*PPFSIE
Trigger: CTCAATGGAAAAAGGAGGCAATATGAAACGAGTATT...CAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CAA 90 bp CTCAGAGTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGCCAATTCTATCTATGTaGGAAATGTCGTACACATCT +
Preference number: 5 (lower is better)
Translates to: LRVEIYVCRTSRQIIYKLPILSM*EMSYTS
Trigger: AGATGTGTACGACATTTCCAACATAGATAGAATTGG...CAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTACTCTGAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CAA 90 bp GTAGAGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGCCAATTCTATCTATGTaGGAAATGTCGTACACATCT +
Preference number: 5 (lower is better)
Translates to: VEIYVCRTSRQIIYKLGKPILSM*EMSYTS
Trigger: AGATGTGTACGACATTTCCAACATAGATAGAATTGG...CTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCTCTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS-3UTR CAA 90 bp AGATTTATGTCTGTCGTACCAGCAGACAGATTATTTATAAATTGGGAAAGGGAACCAATTCTATCTATGTaGGAAATGTCGTACACATCT +
Preference number: 5 (lower is better)
Translates to: RFMSVVPADRLFINWEREPILSM*EMSYTS
Trigger: AGATGTGTACGACATTTCCAACATAGATAGAATTGG...TTCCCTTTCCCAATTTATAAATAATCTGTCTGCTGGTACGACAGACATAAATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
CDS GCA 72 bp AGCCTAGGCTGCTCCCGGACCTCGGCACACACTTTCTaGCGGTTCAGCAGGTACCCGGTGGTCAGGACACTG +
Preference number: 6 (lower is better)
Translates to: SLGCSRTSAHTF*RFSRYPVVRTL
Trigger: CAGTGTCCTGACCACCGGGTACCTGCTGAACCGGCAGAAAGTGTGTGCCGAGGTCCGGGAGCAGCCTAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
ENST00000505060.1
ENST00000505704.1
ENST00000511719.5
ENST00000513094.5
ENST00000515238.5
ENST00000515615.5
CDS CCA 72 bp GTCGAACTGCCCTTGGGTGATCTGCCAAGCAGACTGTaGGGTCACTGTGGCCAGCCTCGGACCATGGTCCTG +
Preference number: 6 (lower is better)
Translates to: VELPLGDLPSRL*GHCGQPRTMVL
Trigger: CAGGACCATGGTCCGAGGCTGGCCACAGTGACCCCACAGTCTGCTTGGCAGATCACCCAAGGGCAGTTCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514086.5
CDS CCA 72 bp GGCCAGCCTCGGACCATGGTCCTGCCACAGCCACAGTaGGTTCTAATCGCCAATCTGCAGTTTCCCTGGGGA +
Preference number: 6 (lower is better)
Translates to: GQPRTMVLPQPQ*VLIANLQFPWG
Trigger: TCCCCAGGGAAACTGCAGATTGGCGATTAGAACCCACTGTGGCTGTGGCAGGACCATGGTCCGAGGCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514086.5
CDS CAA 90 bp AGTGCGCACCCGAGAAGACAGCACGTAATGCTCGTCGAACTGCCCTaGGGTGATCTGCCAAGCAGACTGTGGGGTCACTGTGGCCAGCCT +
Preference number: 6 (lower is better)
Translates to: SAHPRRQHVMLVELP*GDLPSRLWGHCGQP
Trigger: AGGCTGGCCACAGTGACCCCACAGTCTGCTTGGCAGATCACCCAAGGGCAGTTCGACGAGCATTACGTGCTGTCTTCTCGGGTGCGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514086.5
CDS CAA 90 bp GAGCTGATCCTGGCCCATCAGGGCCACTGGGCACATAACAGTACCTaGCTGAGCTTTGGGATCCTAACGTGGACACCAGCTCGTAGTCCT +
Preference number: 6 (lower is better)
Translates to: ELILAHQGHWAHNST*LSFGILTWTPARSP
Trigger: AGGACTACGAGCTGGTGTCCACGTTAGGATCCCAAAGCTCAGCAAGGTACTGTTATGTGCCCAGTGGCCCTGATGGGCCAGGATCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505850.1
CDS CAA 90 bp CCCTGGGGACCCTCAGGCACTGTGCACGACTGCACAATCCGTAAATaGGACACATTCCGGAAGTCTTGGGGCACGGACCTTCGACTAGTA +
Preference number: 6 (lower is better)
Translates to: PWGPSGTVHDCTIRK*DTFRKSWGTDLRLV
Trigger: TACTAGTCGAAGGTCCGTGCCCCAAGACTTCCGGAATGTGTCCAATTTACGGATTGTGCAGTCGTGCACAGTGCCTGAGGGTCCCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514086.5
CDS TCA 72 bp AAGACAGCACGTAATGCTCGTCGAACTGCCCTTGGGTaGTCTGCCAAGCAGACTGTGGGGTCACTGTGGCCA +
Preference number: 6 (lower is better)
Translates to: KTARNARRTALG*SAKQTVGSLWP
Trigger: TGGCCACAGTGACCCCACAGTCTGCTTGGCAGATCACCCAAGGGCAGTTCGACGAGCATTACGTGCTGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514086.5
CDS GCA 72 bp CATCACAGAAGGATCCTTGGAGGAAATAGCCTAGGCTaGTCCCGGACCTCGGCACACACTTTCTGCCGGTTC +
Preference number: 6 (lower is better)
Translates to: HHRRILGGNSLG*SRTSAHTFCRF
Trigger: GAACCGGCAGAAAGTGTGTGCCGAGGTCCGGGAGCAGCCTAGGCTATTTCCTCCAAGGATCCTTCTGTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505704.1
CDS CCA 72 bp GTCGCATCTGAGCTGATCCTGGCCCATCAGGGCCACTaGGCACATAACAGTACCTTGCTGAGCTTTGGGATC +
Preference number: 6 (lower is better)
Translates to: VASELILAHQGH*AHNSTLLSFGI
Trigger: GATCCCAAAGCTCAGCAAGGTACTGTTATGTGCCCAGTGGCCCTGATGGGCCAGGATCAGCTCAGATGCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505850.1
CDS CCA 72 bp CCACAGTGGGTTCTAATCGCCAATCTGCAGTTTCCCTaGGGACCCTCAGGCACTGTGCACGACTGCACAATC +
Preference number: 6 (lower is better)
Translates to: PQWVLIANLQFP*GPSGTVHDCTI
Trigger: GATTGTGCAGTCGTGCACAGTGCCTGAGGGTCCCCAGGGAAACTGCAGATTGGCGATTAGAACCCACTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514086.5
CDS CAA 72 bp CCGAGAAGACAGCACGTAATGCTCGTCGAACTGCCCTaGGGTGATCTGCCAAGCAGACTGTGGGGTCACTGT +
Preference number: 6 (lower is better)
Translates to: PRRQHVMLVELP*GDLPSRLWGHC
Trigger: ACAGTGACCCCACAGTCTGCTTGGCAGATCACCCAAGGGCAGTTCGACGAGCATTACGTGCTGTCTTCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514086.5
CDS CCA 72 bp CCAGAAGGTGGTAGAGCAGTGAGAGAGGCATGGGTCTaGAATCAGGGGGCCTGGATTTGCATTTCGCTGTAC +
Preference number: 6 (lower is better)
Translates to: PEGGRAVREAWV*NQGAWICISLY
Trigger: GTACAGCGAAATGCAAATCCAGGCCCCCTGATTCCAGACCCATGCCTCTCTCACTGCTCTACCACCTTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505704.1
CDS CCA 72 bp CCTCAGGCACTGTGCACGACTGCACAATCCGTAAATTaGACACATTCCGGAAGTCTTGGGGCACGGACCTTC +
Preference number: 6 (lower is better)
Translates to: PQALCTTAQSVN*THSGSLGARTF
Trigger: GAAGGTCCGTGCCCCAAGACTTCCGGAATGTGTCCAATTTACGGATTGTGCAGTCGTGCACAGTGCCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514086.5
CDS CAA 72 bp CCCTCAGGCACTGTGCACGACTGCACAATCCGTAAATaGGACACATTCCGGAAGTCTTGGGGCACGGACCTT +
Preference number: 6 (lower is better)
Translates to: PSGTVHDCTIRK*DTFRKSWGTDL
Trigger: AAGGTCCGTGCCCCAAGACTTCCGGAATGTGTCCAATTTACGGATTGTGCAGTCGTGCACAGTGCCTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514086.5
CDS GCA 72 bp CAGTTTCCCTGGGGACCCTCAGGCACTGTGCACGACTaGACAATCCGTAAATTGGACACATTCCGGAAGTCT +
Preference number: 6 (lower is better)
Translates to: QFPWGPSGTVHD*TIRKLDTFRKS
Trigger: AGACTTCCGGAATGTGTCCAATTTACGGATTGTGCAGTCGTGCACAGTGCCTGAGGGTCCCCAGGGAAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514086.5
CDS GCA 72 bp CCAATCTGCAGTTTCCCTGGGGACCCTCAGGCACTGTaGACGACTGCACAATCCGTAAATTGGACACATTCC +
Preference number: 6 (lower is better)
Translates to: PICSFPGDPQAL*TTAQSVNWTHS
Trigger: GGAATGTGTCCAATTTACGGATTGTGCAGTCGTGCACAGTGCCTGAGGGTCCCCAGGGAAACTGCAGATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514086.5
CDS CCA 72 bp GGAATTCTGCATGCCACTCAAACTCTGCTCAGCGCATaGTATCTCATCCATGGCAGGGTTCCAAGGGCTGAG +
Preference number: 6 (lower is better)
Translates to: GILHATQTLLSA*YLIHGRVPRAE
Trigger: CTCAGCCCTTGGAACCCTGCCATGGATGAGATACCATGCGCTGAGCAGAGTTTGAGTGGCATGCAGAATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505704.1
CDS TCA 72 bp AAGACAGCACGTAATGCTCGTCGAACTGCCCTTGGGTaGTCTGCCAAGCAGACTTTGATGCATCCAGATCCG +
Preference number: 6 (lower is better)
Translates to: KTARNARRTALG*SAKQTLMHPDP
Trigger: CGGATCTGGATGCATCAAAGTCTGCTTGGCAGATCACCCAAGGGCAGTTCGACGAGCATTACGTGCTGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515615.5
CDS GCA 72 bp ACCAATTCTATCTATGTTGGAAATGTCGTACACATCTaGGACCGCGGCAGTGTCCACACCACCTGTGCCACG +
Preference number: 6 (lower is better)
Translates to: TNSIYVGNVVHI*DRGSVHTTCAT
Trigger: CGTGGCACAGGTGGTGTGGACACTGCCGCGGTCGCAGATGTGTACGACATTTCCAACATAGATAGAATTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
ENST00000514086.5
CDS GCA 72 bp GTGACTTCTGTTAGTGAAAAGTGGCCTGCTGGCCTATaGTGTGGAGGACTTGCAGAAAACTTCCCAGTCACC +
Preference number: 6 (lower is better)
Translates to: VTSVSEKWPAGL*CGGLAENFPVT
Trigger: GGTGACTGGGAAGTTTTCTGCAAGTCCTCCACAGCATAGGCCAGCAGGCCACTTTTCACTAACAGAAGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424301.6
CDS CCA 72 bp TGTCTCACTTGGCTTGTGACTTCTGTTAGTGAAAAGTaGCCTGCTGGCCTATGCTGTGGAGGACTTGCAGAA +
Preference number: 6 (lower is better)
Translates to: CLTWLVTSVSEK*PAGLCCGGLAE
Trigger: TTCTGCAAGTCCTCCACAGCATAGGCCAGCAGGCCACTTTTCACTAACAGAAGTCACAAGCCAAGTGAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424301.6
CDS CCA 72 bp CATAACAGTACCTTGCTGAGCTTTGGGATCCTAACGTaGACACCAGCTCGTAGTCCTGTTCCAAGGTTCGAA +
Preference number: 6 (lower is better)
Translates to: HNSTLLSFGILT*TPARSPVPRFE
Trigger: TTCGAACCTTGGAACAGGACTACGAGCTGGTGTCCACGTTAGGATCCCAAAGCTCAGCAAGGTACTGTTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505850.1
CDS CCA 72 bp TGCACAATCCGTAAATTGGACACATTCCGGAAGTCTTaGGGCACGGACCTTCGACTAGTAAAGGGGAAAGCT +
Preference number: 6 (lower is better)
Translates to: CTIRKLDTFRKS*GTDLRLVKGKA
Trigger: AGCTTTCCCCTTTACTAGTCGAAGGTCCGTGCCCCAAGACTTCCGGAATGTGTCCAATTTACGGATTGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514086.5
CDS TCA 72 bp GACATCTCCCCTGGTTCCTCCCCAACCCGTTTAGTGTaGAACGGGACAAAGGGAAACATTTCCTTTGATCTT +
Preference number: 6 (lower is better)
Translates to: DISPGSSPTRLV*NGTKGNISFDL
Trigger: AAGATCAAAGGAAATGTTTCCCTTTGTCCCGTTTCACACTAAACGGGTTGGGGAGGAACCAGGGGAGATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424301.6
CDS CCA 72 bp CAAGCTCAACCTCTGATCGACCAATTCTATCTATGTTaGAAATGTCGTACACATCTGCGACCGCGGCAGTGT +
Preference number: 6 (lower is better)
Translates to: QAQPLIDQFYLC*KCRTHLRPRQC
Trigger: ACACTGCCGCGGTCGCAGATGTGTACGACATTTCCAACATAGATAGAATTGGTCGATCAGAGGTTGAGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
ENST00000514086.5
CDS CAA 72 bp ACAAGCTCAACCTCTGATCGACCAATTCTATCTATGTaGGAAATGTCGTACACATCTGCGACCGCGGCAGTG +
Preference number: 6 (lower is better)
Translates to: TSSTSDRPILSM*EMSYTSATAAV
Trigger: CACTGCCGCGGTCGCAGATGTGTACGACATTTCCAACATAGATAGAATTGGTCGATCAGAGGTTGAGCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254035.9
ENST00000424301.6
ENST00000437669.5
ENST00000514086.5
CDS GCA 72 bp AGGGCTGAGAAAACACATCTATTTTCATCCCTCTCGTaGCACTCCTCCACTTTCCATCTGCAGTGTCCTTTA +
Preference number: 6 (lower is better)
Translates to: RAEKTHLFSSLS*HSSTFHLQCPL
Trigger: TAAAGGACACTGCAGATGGAAAGTGGAGGAGTGGCACGAGAGGGATGAAAATAGATGTGTTTTCTCAGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505704.1
CDS CAA 72 bp ACACTAAATGTCTCAGAGACACCTCAGTGGTTTTCCTaGTCTCTCTCATCCATACCTGCCTATGTGGAATTC +
Preference number: 6 (lower is better)
Translates to: TLNVSETPQWFS*SLSSIPAYVEF
Trigger: GAATTCCACATAGGCAGGTATGGATGAGAGAGACAAGGAAAACCACTGAGGTGTCTCTGAGACATTTAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505704.1