Pregenerated sensors for CKLF (Homo sapiens)
Ensembl gene IDs: ENSG00000217555Ensembl transcript IDs: ENST00000264001.9, ENST00000345436.8, ENST00000351137.8, ENST00000362093.4, ENST00000417030.2, ENST00000526149.1, ENST00000534692.1, ENST00000563092.1
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GATCCCGCTGCTCCCAGCGCTCCCTTGGAAGTTACAGTAGTGCTCTaGGCGGGGTGCAGACTTCGGAAATCTCTTCCTCTAGCTCCTATA | + |
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Preference number: 1 (lower is better) Translates to: DPAAPSAPLEVTVVL*AGCRLRKSLPLAPI Trigger: TATAGGAGCTAGAGGAAGAGATTTCCGAAGTCTGCACCCCGCGCAGAGCACTACTGTAACTTCCAAGGGAGCGCTGGGAGCAGCGGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417030.2 ENST00000534692.1 |
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| 3UTR-3UTR GCA 90 bp | CCACCCAGGCCCGGGTGCCGGAAAACCCGATCCCGCTGCTCCCAGCGCTCCCTTCGGCACATTCTTCCCTaGCACCCAGGCCCGGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: PPRPGCRKTRSRCSQRSLRHILP*HPGPGA Trigger: GGCACCCGGGCCTGGGTGGCAGGGAAGAATGTGCCG...AAGGGAGCGCTGGGAGCAGCGGGATCGGGTTTTCCGGCACCCGGGCCTGGGTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417030.2 ENST00000534692.1 |
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| 3UTR CAA 90 bp | GGCCCGGGTGCCGGAAAACCCGATCCCGCTGCTCCCAGCGCTCCCTaGGAAGTTACAGTAGTGCTCTGCGCGGGGTGCAGACTTCGGAAA | + |
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Preference number: 2 (lower is better) Translates to: GPGAGKPDPAAPSAP*EVTVVLCAGCRLRK Trigger: TTTCCGAAGTCTGCACCCCGCGCAGAGCACTACTGTAACTTCCAAGGGAGCGCTGGGAGCAGCGGGATCGGGTTTTCCGGCACCCGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000417030.2 ENST00000534692.1 |
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| 3UTR-3UTR GCA 90 bp | CCCGGGTGCCGGAAAACCCGATCCCGCTGCTCCCAGCGCTCCCTTGGAAGTTACAAAACCCGATCCCGCTaGTCCCAGCGCTCCCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: PGCRKTRSRCSQRSLGSYKTRSR*SQRSLG Trigger: TCCAAGGGAGCGCTGGGAGCAGCGGGATCGGGTTTT...GTAACTTCCAAGGGAGCGCTGGGAGCAGCGGGATCGGGTTTTCCGGCACCCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000417030.2 ENST00000534692.1 |
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| CDS-3UTR GCA 90 bp | GCCACCCAGGCCCGGGTGCCGGAAAACCCGATCCCGCTGCTCCCAGCGCTCCCTCGGCACATTCTTCCCTaGCACCCAGGCCCGGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: ATQARVPENPIPLLPALPRHILP*HPGPGA Trigger: GGCACCCGGGCCTGGGTGGCAGGGAAGAATGTGCCG...AGGGAGCGCTGGGAGCAGCGGGATCGGGTTTTCCGGCACCCGGGCCTGGGTGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417030.2 ENST00000534692.1 |
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| CDS-3UTR TCA 90 bp | TGCCACCCAGGCCCGGGTGCCGGAAAACCCGATCCCGCTGCTCCCAGCGCTCCCTCTCAGCTGGCTGCCTaGGTAGGTTCTGCGAAGCGA | + |
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Preference number: 4 (lower is better) Translates to: CHPGPGAGKPDPAAPSAPSQLAA*VGSAKR Trigger: TCGCTTCGCAGAACCTACTCAGGCAGCCAGCTGAGA...GGGAGCGCTGGGAGCAGCGGGATCGGGTTTTCCGGCACCCGGGCCTGGGTGGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417030.2 ENST00000534692.1 |
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| CDS-3UTR GCA 90 bp | TGCCACCCAGGCCCGGGTGCCGGAAAACCCGATCCCGCTGCTCCCAGCGCTCCCGTTACAGTAGTGCTCTaGGCGGGGTGCAGACTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: CHPGPGAGKPDPAAPSAPVTVVL*AGCRLR Trigger: CCGAAGTCTGCACCCCGCGCAGAGCACTACTGTAAC...GGGAGCGCTGGGAGCAGCGGGATCGGGTTTTCCGGCACCCGGGCCTGGGTGGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000417030.2 ENST00000534692.1 |
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| CDS-3UTR GCA 90 bp | GCCACCCAGGCCCGGGTGCCGGAAAACCCGATCCCGCTGCTCCCAGCGCTCCCTGTTATCCATCGCGTCTaGAGACCCAGCAGCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: ATQARVPENPIPLLPALPVIHRV*RPSSST Trigger: AGTGCTGCTGCTGGGTCTGCAGACGCGATGGATAAC...AGGGAGCGCTGGGAGCAGCGGGATCGGGTTTTCCGGCACCCGGGCCTGGGTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417030.2 ENST00000534692.1 |
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| CDS-3UTR GCA 90 bp | CCCTGCCACCCAGGCCCGGGTGCCGGAAAACCCGATCCCGCTGCTCCCAGCGCTCTCTTCTCAGCTGGCTaGCTGAGTAGGTTCTGCGAA | + |
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Preference number: 4 (lower is better) Translates to: PCHPGPGAGKPDPAAPSALFSAG*LSRFCE Trigger: TTCGCAGAACCTACTCAGGCAGCCAGCTGAGAAGAG...AGCGCTGGGAGCAGCGGGATCGGGTTTTCCGGCACCCGGGCCTGGGTGGCAGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417030.2 ENST00000534692.1 |
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| CDS-3UTR GCA 90 bp | AGGCCCGGGTGCCGGAAAACCCGATCCCGCTGCTCCCAGCGCTCCCTTGGAAGTAAAACCCGATCCCGCTaGTCCCAGCGCTCCCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: RPGCRKTRSRCSQRSLGSKTRSR*SQRSLG Trigger: TCCAAGGGAGCGCTGGGAGCAGCGGGATCGGGTTTT...ACTTCCAAGGGAGCGCTGGGAGCAGCGGGATCGGGTTTTCCGGCACCCGGGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000417030.2 ENST00000534692.1 |
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| 3UTR CAA 72 bp | GCCGGAAAACCCGATCCCGCTGCTCCCAGCGCTCCCTaGGAAGTTACAGTAGTGCTCTGCGCGGGGTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AGKPDPAAPSAP*EVTVVLCAGCR Trigger: TCTGCACCCCGCGCAGAGCACTACTGTAACTTCCAAGGGAGCGCTGGGAGCAGCGGGATCGGGTTTTCCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000417030.2 ENST00000534692.1 |
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| CDS-3UTR TCA 90 bp | CGGGTGCCGGAAAACCCGATCCCGCTGCTCCCAGCGCTCCCTTGGAAGTTACAGTCTCAGCTGGCTGCCTaGGTAGGTTCTGCGAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: RVPENPIPLLPALPWKLQSQLAA*VGSAKR Trigger: TCGCTTCGCAGAACCTACTCAGGCAGCCAGCTGAGA...CTGTAACTTCCAAGGGAGCGCTGGGAGCAGCGGGATCGGGTTTTCCGGCACCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417030.2 ENST00000534692.1 |
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| CDS-3UTR TCA 90 bp | CTGCCACCCAGGCCCGGGTGCCGGAAAACCCGATCCCGCTGCTCCCAGCGCTCCAAGCTGAGCCTTACATaGAGACTACCAAGCAATGCA | + |
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Preference number: 4 (lower is better) Translates to: LPPRPGCRKTRSRCSQRSKLSLT*RLPSNA Trigger: TGCATTGCTTGGTAGTCTTCATGTAAGGCTCAGCTT...GGAGCGCTGGGAGCAGCGGGATCGGGTTTTCCGGCACCCGGGCCTGGGTGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534692.1 |
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| CDS-3UTR GCA 90 bp | CGGGTGCCGGAAAACCCGATCCCGCTGCTCCCAGCGCTCCCTTGGAAGTTACAGGTGCTCTGCGCGGGGTaGAGACTTCGGAAATCTCTT | + |
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Preference number: 4 (lower is better) Translates to: RVPENPIPLLPALPWKLQVLCAG*RLRKSL Trigger: AAGAGATTTCCGAAGTCTGCACCCCGCGCAGAGCAC...CTGTAACTTCCAAGGGAGCGCTGGGAGCAGCGGGATCGGGTTTTCCGGCACCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000417030.2 ENST00000534692.1 |
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| CDS-3UTR GCA 90 bp | GGGTGCCGGAAAACCCGATCCCGCTGCTCCCAGCGCTCCCTTGGAAGTTACAGTGTTACAGTAGTGCTCTaGGCGGGGTGCAGACTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GCRKTRSRCSQRSLGSYSVTVVL*AGCRLR Trigger: CCGAAGTCTGCACCCCGCGCAGAGCACTACTGTAAC...ACTGTAACTTCCAAGGGAGCGCTGGGAGCAGCGGGATCGGGTTTTCCGGCACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000417030.2 ENST00000534692.1 |
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| CDS-3UTR GCA 90 bp | CCCTTGGAAGTTACAGTAGTGCTCTGCGCGGGGTGCAGACTTCGGAAATCTCTTCCACCCAGGCCCGGGTaGCGGAAAACCCGATCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PLEVTVVLCAGCRLRKSLPPRPG*RKTRSR Trigger: GCGGGATCGGGTTTTCCGGCACCCGGGCCTGGGTGG...AAGAGATTTCCGAAGTCTGCACCCCGCGCAGAGCACTACTGTAACTTCCAAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000417030.2 ENST00000534692.1 |
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| CDS-3UTR CCA 90 bp | CTGCCACCCAGGCCCGGGTGCCGGAAAACCCGATCCCGCTGCTCCCAGCGCTCCCAACTGTCAATGTTGTaGTTTCTGGTATCAGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPPRPGCRKTRSRCSQRSQLSML*FLVSVP Trigger: TGGCACTGATACCAGAAACCACAACATTGACAGTTG...GGAGCGCTGGGAGCAGCGGGATCGGGTTTTCCGGCACCCGGGCCTGGGTGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417030.2 ENST00000534692.1 |
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| CDS-3UTR GCA 90 bp | CCGGGTGCCGGAAAACCCGATCCCGCTGCTCCCAGCGCTCCCTTGGAAGTTACACTCTTCTCAGCTGGCTaGCTGAGTAGGTTCTGCGAA | + |
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Preference number: 4 (lower is better) Translates to: PGAGKPDPAAPSAPLEVTLFSAG*LSRFCE Trigger: TTCGCAGAACCTACTCAGGCAGCCAGCTGAGAAGAG...TGTAACTTCCAAGGGAGCGCTGGGAGCAGCGGGATCGGGTTTTCCGGCACCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417030.2 ENST00000534692.1 |
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| CDS-3UTR GCA 90 bp | CAGGCCCGGGTGCCGGAAAACCCGATCCCGCTGCTCCCAGCGCTCCCTTGGAAGGGTTTCTGGTATCAGTaGCAACACAGATACGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: QARVPENPIPLLPALPWKGFWYQ*QHRYDE Trigger: CTCATCGTATCTGTGTTGGCACTGATACCAGAAACC...CTTCCAAGGGAGCGCTGGGAGCAGCGGGATCGGGTTTTCCGGCACCCGGGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417030.2 ENST00000534692.1 |
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| CDS-3UTR CCA 90 bp | AGGCCCGGGTGCCGGAAAACCCGATCCCGCTGCTCCCAGCGCTCCCTTGGAAGTCAACTGTCAATGTTGTaGTTTCTGGTATCAGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RPGCRKTRSRCSQRSLGSQLSML*FLVSVP Trigger: TGGCACTGATACCAGAAACCACAACATTGACAGTTG...ACTTCCAAGGGAGCGCTGGGAGCAGCGGGATCGGGTTTTCCGGCACCCGGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417030.2 ENST00000534692.1 |
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| CDS-3UTR GCA 90 bp | TCCCTTGGAAGTTACAGTAGTGCTCTGCGCGGGGTGCAGACTTCGGAAATCTCTAAAACCCGATCCCGCTaGTCCCAGCGCTCCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLGSYSSALRGVQTSEISKTRSR*SQRSLG Trigger: TCCAAGGGAGCGCTGGGAGCAGCGGGATCGGGTTTT...AGAGATTTCCGAAGTCTGCACCCCGCGCAGAGCACTACTGTAACTTCCAAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000417030.2 ENST00000534692.1 |
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| CDS-3UTR GCA 90 bp | CCACCAACTGTCAATGTTGTGGTTTCTGGTATCAGTGCCAACACAGATACGATGCGGCACATTCTTCCCTaGCACCCAGGCCCGGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: PPTVNVVVSGISANTDTMRHILP*HPGPGA Trigger: GGCACCCGGGCCTGGGTGGCAGGGAAGAATGTGCCG...CATCGTATCTGTGTTGGCACTGATACCAGAAACCACAACATTGACAGTTGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534692.1 |
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| CDS-3UTR GCA 90 bp | TTGGAAGTTACAGTAGTGCTCTGCGCGGGGTGCAGACTTCGGAAATCTCTTCCTTGCCTGAGTAGGTTCTaGGAAGCGATAGCAACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LEVTVVLCAGCRLRKSLPCLSRF*EAIATA Trigger: GGCGGTTGCTATCGCTTCGCAGAACCTACTCAGGCA...AGGAAGAGATTTCCGAAGTCTGCACCCCGCGCAGAGCACTACTGTAACTTCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417030.2 ENST00000534692.1 |
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| CDS-3UTR GCA 90 bp | AATGTTGTGGTTTCTGGTATCAGTGCCAACACAGATACGATGAGCATGAATACTCCACCCAGGCCCGGGTaGCGGAAAACCCGATCCCGC | + |
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Preference number: 4 (lower is better) Translates to: NVVVSGISANTDTMSMNTPPRPG*RKTRSR Trigger: GCGGGATCGGGTTTTCCGGCACCCGGGCCTGGGTGG...AGTATTCATGCTCATCGTATCTGTGTTGGCACTGATACCAGAAACCACAACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534692.1 |
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| CDS-3UTR CCA 90 bp | GCCGGAAAACCCGATCCCGCTGCTCCCAGCGCTCCCTTGGAAGTTACAGTAGTGCAATGTTGTGGTTTCTaGTATCAGTGCCAACACAGA | + |
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Preference number: 4 (lower is better) Translates to: AGKPDPAAPSAPLEVTVVQCCGF*YQCQHR Trigger: TCTGTGTTGGCACTGATACCAGAAACCACAACATTG...CACTACTGTAACTTCCAAGGGAGCGCTGGGAGCAGCGGGATCGGGTTTTCCGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417030.2 ENST00000534692.1 |
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| CDS-3UTR GCA 90 bp | ACAGTAGTGCTCTGCGCGGGGTGCAGACTTCGGAAATCTCTTCCTCTAGCTCCTTGTTTTATTTTCGGCTaGACGTTATCCATCGCGTCT | + |
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Preference number: 4 (lower is better) Translates to: TVVLCAGCRLRKSLPLAPCFIFG*TLSIAS Trigger: AGACGCGATGGATAACGTGCAGCCGAAAATAAAACA...AGGAGCTAGAGGAAGAGATTTCCGAAGTCTGCACCCCGCGCAGAGCACTACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000417030.2 ENST00000534692.1 |
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| CDS-3UTR GCA 90 bp | CTTGGAAGTTACAGTAGTGCTCTGCGCGGGGTGCAGACTTCGGAAATCTCTTCCTGTTTTATTTTCGGCTaGACGTTATCCATCGCGTCT | + |
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Preference number: 4 (lower is better) Translates to: LGSYSSALRGVQTSEISSCFIFG*TLSIAS Trigger: AGACGCGATGGATAACGTGCAGCCGAAAATAAAACA...GGAAGAGATTTCCGAAGTCTGCACCCCGCGCAGAGCACTACTGTAACTTCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000417030.2 ENST00000534692.1 |
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| CDS-3UTR GCA 90 bp | TTGGAAGTTACAGTAGTGCTCTGCGCGGGGTGCAGACTTCGGAAATCTCTTCCTGGTTTCTGGTATCAGTaGCAACACAGATACGATGAG | + |
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Preference number: 4 (lower is better) Translates to: LEVTVVLCAGCRLRKSLPGFWYQ*QHRYDE Trigger: CTCATCGTATCTGTGTTGGCACTGATACCAGAAACC...AGGAAGAGATTTCCGAAGTCTGCACCCCGCGCAGAGCACTACTGTAACTTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417030.2 ENST00000534692.1 |
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| CDS-3UTR CCA 90 bp | ACAGTAGTGCTCTGCGCGGGGTGCAGACTTCGGAAATCTCTTCCTCTAGCTCCTAGTGATAACAATATATaGTTCAGGGGCTTGTGCGAT | + |
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Preference number: 4 (lower is better) Translates to: TVVLCAGCRLRKSLPLAPSDNNI*FRGLCD Trigger: ATCGCACAAGCCCCTGAACCATATATTGTTATCACT...AGGAGCTAGAGGAAGAGATTTCCGAAGTCTGCACCCCGCGCAGAGCACTACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417030.2 |
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| CDS-3UTR GCA 90 bp | GTTGTGGTTTCTGGTATCAGTGCCAACACAGATACGATGAGCATGAATACTGTTTGCCTGAGTAGGTTCTaGGAAGCGATAGCAACCGCC | + |
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Preference number: 4 (lower is better) Translates to: VVVSGISANTDTMSMNTVCLSRF*EAIATA Trigger: GGCGGTTGCTATCGCTTCGCAGAACCTACTCAGGCA...AACAGTATTCATGCTCATCGTATCTGTGTTGGCACTGATACCAGAAACCACAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534692.1 |
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| CDS-3UTR CCA 90 bp | GAAGTTACAGTAGTGCTCTGCGCGGGGTGCAGACTTCGGAAATCTCTTCCTCTACAATGTTGTGGTTTCTaGTATCAGTGCCAACACAGA | + |
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Preference number: 4 (lower is better) Translates to: EVTVVLCAGCRLRKSLPLQCCGF*YQCQHR Trigger: TCTGTGTTGGCACTGATACCAGAAACCACAACATTG...TAGAGGAAGAGATTTCCGAAGTCTGCACCCCGCGCAGAGCACTACTGTAACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417030.2 ENST00000534692.1 |
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| CDS-3UTR GCA 90 bp | AATGTTGTGGTTTCTGGTATCAGTGCCAACACAGATACGATGAGCATGAATACTGTGCTCTGCGCGGGGTaGAGACTTCGGAAATCTCTT | + |
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Preference number: 4 (lower is better) Translates to: NVVVSGISANTDTMSMNTVLCAG*RLRKSL Trigger: AAGAGATTTCCGAAGTCTGCACCCCGCGCAGAGCAC...AGTATTCATGCTCATCGTATCTGTGTTGGCACTGATACCAGAAACCACAACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534692.1 |
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| CDS GCA 90 bp | AGCACTTTCCCTCAACTCTTCTCAGCTGGCTGCCTGAGTAGGTTCTaGGAAGCGATAGCAACCGCCACCGCGGCGGAGCACCGCCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: STFPQLFSAGCLSRF*EAIATATAAEHRPP Trigger: GGGAGGGCGGTGCTCCGCCGCGGTGGCGGTTGCTATCGCTTCGCAGAACCTACTCAGGCAGCCAGCTGAGAAGAGTTGAGGGAAAGTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000264001.9 ENST00000345436.8 ENST00000351137.8 ENST00000362093.4 ENST00000417030.2 ENST00000526149.1 ENST00000534692.1 |
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| CDS-3UTR CAA 90 bp | GCCCGGGTGCCGGAAAACCCGATCCCGCTGCTCCCAGCGCTCCCTTGGAAGTTAGCTCCCAGCGCTCCCTaGGAAGTTACAGTAGTGCTC | + |
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Preference number: 5 (lower is better) Translates to: ARVPENPIPLLPALPWKLAPSAP*EVTVVL Trigger: GAGCACTACTGTAACTTCCAAGGGAGCGCTGGGAGC...TAACTTCCAAGGGAGCGCTGGGAGCAGCGGGATCGGGTTTTCCGGCACCCGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417030.2 ENST00000534692.1 |
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| CDS GCA 90 bp | TGCAGACCCAGCAGCAGCACTTTCCCTCAACTCTTCTCAGCTGGCTaGCTGAGTAGGTTCTGCGAAGCGATAGCAACCGCCACCGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: CRPSSSTFPQLFSAG*LSRFCEAIATATAA Trigger: CGCCGCGGTGGCGGTTGCTATCGCTTCGCAGAACCTACTCAGGCAGCCAGCTGAGAAGAGTTGAGGGAAAGTGCTGCTGCTGGGTCTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000264001.9 ENST00000345436.8 ENST00000351137.8 ENST00000362093.4 ENST00000417030.2 ENST00000526149.1 ENST00000534692.1 |
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| CDS-3UTR CAA 90 bp | GCCCGGGTGCCGGAAAACCCGATCCCGCTGCTCCCAGCGCTCCCTTGGAAGTTACACCAACTGTCAATGTaGTGGTTTCTGGTATCAGTG | + |
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Preference number: 5 (lower is better) Translates to: ARVPENPIPLLPALPWKLHQLSM*WFLVSV Trigger: CACTGATACCAGAAACCACAACATTGACAGTTGGTG...TAACTTCCAAGGGAGCGCTGGGAGCAGCGGGATCGGGTTTTCCGGCACCCGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417030.2 ENST00000534692.1 |
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| CDS-3UTR CAA 90 bp | TCCCTTGGAAGTTACAGTAGTGCTCTGCGCGGGGTGCAGACTTCGGAAATCTCTGCTCCCAGCGCTCCCTaGGAAGTTACAGTAGTGCTC | + |
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Preference number: 5 (lower is better) Translates to: SLGSYSSALRGVQTSEISAPSAP*EVTVVL Trigger: GAGCACTACTGTAACTTCCAAGGGAGCGCTGGGAGC...AGAGATTTCCGAAGTCTGCACCCCGCGCAGAGCACTACTGTAACTTCCAAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417030.2 ENST00000534692.1 |
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| CDS-3UTR CAA 90 bp | GAAGTTACAGTAGTGCTCTGCGCGGGGTGCAGACTTCGGAAATCTCTTCCTCTAGTTGTTACCAGTGAGTaGATAATATCAAGCAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: EVTVVLCAGCRLRKSLPLVVTSE*IISSKG Trigger: GCCTTTGCTTGATATTATCAACTCACTGGTAACAAC...TAGAGGAAGAGATTTCCGAAGTCTGCACCCCGCGCAGAGCACTACTGTAACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417030.2 |
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| CDS CCA 90 bp | CACAAGTGCAAACACCCCTCCACCAACTGTCAATGTTGTGGTTTCTaGTATCAGTGCCAACACAGATACGATGAGCATGAATACTGTTGT | + |
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Preference number: 5 (lower is better) Translates to: HKCKHPSTNCQCCGF*YQCQHRYDEHEYCC Trigger: ACAACAGTATTCATGCTCATCGTATCTGTGTTGGCACTGATACCAGAAACCACAACATTGACAGTTGGTGGAGGGGTGTTTGCACTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000264001.9 ENST00000351137.8 ENST00000563092.1 |
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| CDS GCA 72 bp | CCTCAACTCTTCTCAGCTGGCTGCCTGAGTAGGTTCTaGGAAGCGATAGCAACCGCCACCGCGGCGGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: PQLFSAGCLSRF*EAIATATAAEH Trigger: GTGCTCCGCCGCGGTGGCGGTTGCTATCGCTTCGCAGAACCTACTCAGGCAGCCAGCTGAGAAGAGTTGAGG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000264001.9 ENST00000345436.8 ENST00000351137.8 ENST00000362093.4 ENST00000417030.2 ENST00000526149.1 ENST00000534692.1 |
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| CDS GCA 72 bp | AGCAGCAGCACTTTCCCTCAACTCTTCTCAGCTGGCTaGCTGAGTAGGTTCTGCGAAGCGATAGCAACCGCC | + |
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Preference number: 6 (lower is better) Translates to: SSSTFPQLFSAG*LSRFCEAIATA Trigger: GGCGGTTGCTATCGCTTCGCAGAACCTACTCAGGCAGCCAGCTGAGAAGAGTTGAGGGAAAGTGCTGCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000264001.9 ENST00000345436.8 ENST00000351137.8 ENST00000362093.4 ENST00000417030.2 ENST00000526149.1 ENST00000534692.1 |
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| CDS GCA 72 bp | CCGGTAAATAAGGGCCCCGTCGGCAAGACAGCATACTaGTGTCACAAGTGCAAACACCCCTCCACCAACTGT | + |
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Preference number: 6 (lower is better) Translates to: PVNKGPVGKTAY*CHKCKHPSTNC Trigger: ACAGTTGGTGGAGGGGTGTTTGCACTTGTGACAGCAGTATGCTGTCTTGCCGACGGGGCCCTTATTTACCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000264001.9 ENST00000351137.8 ENST00000563092.1 |
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| CDS GCA 72 bp | CCGGTAAATAAGGGCCCCGTCGGCAAGACAGCATACTaGTGTCACAAGTGCAAACACCAGCCGCAGCATCTT | + |
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Preference number: 6 (lower is better) Translates to: PVNKGPVGKTAY*CHKCKHQPQHL Trigger: AAGATGCTGCGGCTGGTGTTTGCACTTGTGACAGCAGTATGCTGTCTTGCCGACGGGGCCCTTATTTACCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362093.4 |
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| CDS GCA 72 bp | ATGTTTTATTTTCGGCTGCACGTTATCCATCGCGTCTaGAGACCCAGCAGCAGCACTTTCCCTCAACTCTTC | + |
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Preference number: 6 (lower is better) Translates to: MFYFRLHVIHRV*RPSSSTFPQLF Trigger: GAAGAGTTGAGGGAAAGTGCTGCTGCTGGGTCTGCAGACGCGATGGATAACGTGCAGCCGAAAATAAAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000264001.9 ENST00000345436.8 ENST00000351137.8 ENST00000362093.4 ENST00000417030.2 ENST00000526149.1 ENST00000534692.1 |
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| CDS CAA 72 bp | TCACAAGTGCAAACACCCCTCCACCAACTGTCAATGTaGTGGTTTCTGGTATCAGTGCCAACACAGATACGA | + |
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Preference number: 6 (lower is better) Translates to: SQVQTPLHQLSM*WFLVSVPTQIR Trigger: TCGTATCTGTGTTGGCACTGATACCAGAAACCACAACATTGACAGTTGGTGGAGGGGTGTTTGCACTTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000264001.9 ENST00000351137.8 ENST00000563092.1 |
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| CDS CAA 72 bp | GATACGATGAGCATGAATACTGTTGTTACCAGTGAGTaGATAATATCCTGTTCAGAAGTGACTGCAGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: DTMSMNTVVTSE*IISCSEVTAVL Trigger: GAGCACTGCAGTCACTTCTGAACAGGATATTATCAACTCACTGGTAACAACAGTATTCATGCTCATCGTATC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563092.1 |
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