RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CKAP5 (Homo sapiens)

Ensembl gene IDs: ENSG00000175216

Ensembl transcript IDs: ENST00000312055.9, ENST00000354558.7, ENST00000525248.1, ENST00000525896.1, ENST00000526496.1, ENST00000526876.2, ENST00000526943.1, ENST00000527333.5, ENST00000528593.1, ENST00000529230.6, ENST00000532321.1, ENST00000533413.5

Found 880 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTTGCTGTGGAGCATGTCTGTGGAAGAGGCGACAGTAGGAACTGCTaGTTTGGAGAGCAAAGAGGTCAAAGGAGGTCGGTCATCTTGCTA +
Preference number: 1 (lower is better)
Translates to: FAVEHVCGRGDSRNC*FGEQRGQRRSVILL
Trigger: TAGCAAGATGACCGACCTCCTTTGACCTCTTTGCTCTCCAAACCAGCAGTTCCTACTGTCGCCTCTTCCACAGACATGCTCCACAGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525896.1
3UTR GCA 90 bp AGAGAAGGAGAGAGATTGTCTAAGGTCAGGTCAAGCAGGTCAAGATaGAGCTCCAGAACTACAGCAAGACTAAGCCACTTCTCTGTGGGC +
Preference number: 1 (lower is better)
Translates to: REGERLSKVRSSRSR*SSRTTARLSHFSVG
Trigger: GCCCACAGAGAAGTGGCTTAGTCTTGCTGTAGTTCTGGAGCTGCATCTTGACCTGCTTGACCTGACCTTAGACAATCTCTCTCCTTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525896.1
3UTR TCA 90 bp GGTTTGGAGAGCAAAGAGGTCAAAGGAGGTCGGTCATCTTGCTATTaGGAGAAGGAGAGAGATTGTCTAAGGTCAGGTCAAGCAGGTCAA +
Preference number: 1 (lower is better)
Translates to: GLESKEVKGGRSSCY*EKERDCLRSGQAGQ
Trigger: TTGACCTGCTTGACCTGACCTTAGACAATCTCTCTCCTTCTCTCAATAGCAAGATGACCGACCTCCTTTGACCTCTTTGCTCTCCAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525896.1
3UTR-3UTR GCA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGACTAAAGCTGCAGGGTaGCGGGGGAGTGGGGCAGCT +
Preference number: 2 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAETKAAG*RGSGAA
Trigger: AGCTGCCCCACTCCCCCGGCACCCTGCAGCTTTAGT...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
3UTR-3UTR TCA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATACTTGTGCCACAATaGCTCCTCCCCCTAGCTCCA +
Preference number: 2 (lower is better)
Translates to: SSTDSLLEQQDADREKQSILVPQ*LLPLAP
Trigger: TGGAGCTAGGGGGAGGAGTCATTGTGGCACAAGTAT...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
3UTR-3UTR TCA 90 bp CAATCTCTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCAGAGCAGCAGGACGCTaGCAGAGAGAAGCAGAGTAT +
Preference number: 2 (lower is better)
Translates to: QSLGAILCAFGQQSGRMPRAAGR*QREAEY
Trigger: ATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCT...GGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAGAGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
3UTR-3UTR GCA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCACTAAAGCTGCAGGGTaGCGGGGGAGTGGGGCAGCT +
Preference number: 2 (lower is better)
Translates to: DADREKQSMYKYLCHNDSTKAAG*RGSGAA
Trigger: AGCTGCCCCACTCCCCCGGCACCCTGCAGCTTTAGT...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
3UTR-3UTR TCA 90 bp GAACACAAATCTAGTTGTAGTGTGAGAACCACTGAAGCCCAGCCAATCTCTGGGATCTGGGAACTAGACTaGGCAGAGAGGGGGCAGCTG +
Preference number: 2 (lower is better)
Translates to: EHKSSCSVRTTEAQPISGIWELD*AERGQL
Trigger: CAGCTGCCCCCTCTCTGCTCAGTCTAGTTCCCAGAT...CCCAGAGATTGGCTGGGCTTCAGTGGTTCTCACACTACAACTAGATTTGTGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529230.6
3UTR-3UTR GCA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAACTAAAGCTGCAGGGTaGCGGGGGAGTGGGGCAGCT +
Preference number: 2 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRATKAAG*RGSGAA
Trigger: AGCTGCCCCACTCCCCCGGCACCCTGCAGCTTTAGT...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
3UTR-3UTR TCA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCCTAGCTCCACGGCATaGTACATACAACCAGTTTGT +
Preference number: 2 (lower is better)
Translates to: LNSSTDSLLEQQDADREKPSSTA*YIQPVC
Trigger: ACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGG...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
3UTR-3UTR GCA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTaGCACAATGACTCCTCCCCC +
Preference number: 2 (lower is better)
Translates to: SSTDSLLEQQDADREKQSMYKYL*HNDSSP
Trigger: GGGGGAGGAGTCATTGTGGCACAAGTATTTGTACAT...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
3UTR CAA 90 bp GGTCAAAGGAGGTCGGTCATCTTGCTATTGAGAGAAGGAGAGAGATaGTCTAAGGTCAGGTCAAGCAGGTCAAGATGCAGCTCCAGAACT +
Preference number: 2 (lower is better)
Translates to: GQRRSVILLLREGER*SKVRSSRSRCSSRT
Trigger: AGTTCTGGAGCTGCATCTTGACCTGCTTGACCTGACCTTAGACAATCTCTCTCCTTCTCTCAATAGCAAGATGACCGACCTCCTTTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525896.1
3UTR-3UTR TCA 90 bp GAACACAAATCTAGTTGTAGTGTGAGAACCACTGAAGCCCAGCCAATCTCTGGGTCATACAGAATACAGTaGCCCTTCAGGGCGACAGAG +
Preference number: 2 (lower is better)
Translates to: EHKSSCSVRTTEAQPISGSYRIQ*PFRATE
Trigger: CTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGA...CCCAGAGATTGGCTGGGCTTCAGTGGTTCTCACACTACAACTAGATTTGTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
3UTR-3UTR GCA 90 bp GGAGAGCAAAGAGGTCAAAGGAGGTCGGTCATCTTGCTATTGAGAGAAGGAGAGTCAAGCAGGTCAAGATaGAGCTCCAGAACTACAGCA +
Preference number: 2 (lower is better)
Translates to: GEQRGQRRSVILLLREGESSRSR*SSRTTA
Trigger: TGCTGTAGTTCTGGAGCTGCATCTTGACCTGCTTGA...CTCTCCTTCTCTCAATAGCAAGATGACCGACCTCCTTTGACCTCTTTGCTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525896.1
3UTR-3UTR CCA 90 bp CTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCAAGAGCACGACTGGTGATAATTaGAGGGAAATCATGACCAAA +
Preference number: 2 (lower is better)
Translates to: LGAILCAFGQQSGRMPKSTTGDN*REIMTK
Trigger: TTTGGTCATGATTTCCCTCCAATTATCACCAGTCGT...GCTCTTGGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
3UTR CAA 90 bp TGGTTTGGAGAGCAAAGAGGTCAAAGGAGGTCGGTCATCTTGCTATaGAGAGAAGGAGAGAGATTGTCTAAGGTCAGGTCAAGCAGGTCA +
Preference number: 2 (lower is better)
Translates to: WFGEQRGQRRSVILL*REGERLSKVRSSRS
Trigger: TGACCTGCTTGACCTGACCTTAGACAATCTCTCTCCTTCTCTCAATAGCAAGATGACCGACCTCCTTTGACCTCTTTGCTCTCCAAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525896.1
3UTR CAA 90 bp AACTGCTGGTTTGGAGAGCAAAGAGGTCAAAGGAGGTCGGTCATCTaGCTATTGAGAGAAGGAGAGAGATTGTCTAAGGTCAGGTCAAGC +
Preference number: 2 (lower is better)
Translates to: NCWFGEQRGQRRSVI*LLREGERLSKVRSS
Trigger: GCTTGACCTGACCTTAGACAATCTCTCTCCTTCTCTCAATAGCAAGATGACCGACCTCCTTTGACCTCTTTGCTCTCCAAACCAGCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525896.1
3UTR-3UTR TCA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAACCTAGCTCCACGGCATaGTACATACAACCAGTTTGT +
Preference number: 2 (lower is better)
Translates to: DSLLEQQDADREKQSMYKPSSTA*YIQPVC
Trigger: ACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGG...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
3UTR-3UTR GCA 90 bp ACAAGGAAGGATGAGATTTTTCTGCTCCCTAGGAGCTGTTTGTGGAGAGCAGGGATGTACAAATACTTGTaGCACAATGACTCCTCCCCC +
Preference number: 2 (lower is better)
Translates to: TRKDEIFLLPRSCLWRAGMYKYL*HNDSSP
Trigger: GGGGGAGGAGTCATTGTGGCACAAGTATTTGTACAT...CCCTGCTCTCCACAAACAGCTCCTAGGGAGCAGAAAAATCTCATCCTTCCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529230.6
3UTR CCA 72 bp GAGCATGTCTGTGGAAGAGGCGACAGTAGGAACTGCTaGTTTGGAGAGCAAAGAGGTCAAAGGAGGTCGGTC +
Preference number: 3 (lower is better)
Translates to: EHVCGRGDSRNC*FGEQRGQRRSV
Trigger: GACCGACCTCCTTTGACCTCTTTGCTCTCCAAACCAGCAGTTCCTACTGTCGCCTCTTCCACAGACATGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525896.1
3UTR TCA 72 bp CTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTaGCAGAGAGAAGCAGAGTATGTACAAATACTTGTG +
Preference number: 3 (lower is better)
Translates to: LIHGQSSRAAGR*QREAEYVQILV
Trigger: CACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
3UTR-3UTR CAA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAGTATGTACAAATACTaGTGCCACAATGACTCCTCC +
Preference number: 3 (lower is better)
Translates to: TLNSSTDSLLEQQDADRESMYKY*CHNDSS
Trigger: GGAGGAGTCATTGTGGCACAAGTATTTGTACATACT...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
3UTR-3UTR CAA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGAGTATGTACAAATACTaGTGCCACAATGACTCCTCC +
Preference number: 3 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTSMYKY*CHNDSS
Trigger: GGAGGAGTCATTGTGGCACAAGTATTTGTACATACT...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
3UTR TCA 72 bp AGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATaGCTCCTCCCCCTAGCTCCACGGCATGATACATAC +
Preference number: 3 (lower is better)
Translates to: REAEYVQILVPQ*LLPLAPRHDTY
Trigger: GTATGTATCATGCCGTGGAGCTAGGGGGAGGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
3UTR-3UTR CAA 90 bp GAACACAAATCTAGTTGTAGTGTGAGAACCACTGAAGCCCAGCCAATCTCTGGGATACATACAACCAGTTaGTATACACTAGGCCTGCTG +
Preference number: 3 (lower is better)
Translates to: EHKSSCSVRTTEAQPISGIHTTS*YTLGLL
Trigger: CAGCAGGCCTAGTGTATACAAACTGGTTGTATGTAT...CCCAGAGATTGGCTGGGCTTCAGTGGTTCTCACACTACAACTAGATTTGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
3UTR-3UTR CAA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCATACATACAACCAGTTaGTATACACTAGGCCTGCTG +
Preference number: 3 (lower is better)
Translates to: DADREKQSMYKYLCHNDSIHTTS*YTLGLL
Trigger: CAGCAGGCCTAGTGTATACAAACTGGTTGTATGTAT...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
3UTR-3UTR CAA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGATACATACAACCAGTTaGTATACACTAGGCCTGCTG +
Preference number: 3 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQIHTTS*YTLGLL
Trigger: CAGCAGGCCTAGTGTATACAAACTGGTTGTATGTAT...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCAAGAGCTGGGCTGCCTCAGGATaGCCACTCATGCTTCGGGCT +
Preference number: 4 (lower is better)
Translates to: LGAILCAFGQQSGRMPKSWAASG*PLMLRA
Trigger: AGCCCGAAGCATGAGTGGGCATCCTGAGGCAGCCCA...GCTCTTGGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR GCA 90 bp AGAACTACAGCAAGACTAAGCCACTTCTCTGTGGGCCAGCCTGCCTCGGACCTGCTATGGAGGACACTGTaGTTGTGGGCGTGGGCACAC +
Preference number: 4 (lower is better)
Translates to: RTTARLSHFSVGQPASDLLWRTL*LWAWAH
Trigger: GTGTGCCCACGCCCACAAGCACAGTGTCCTCCATAG...CAGGTCCGAGGCAGGCTGGCCCACAGAGAAGTGGCTTAGTCTTGCTGTAGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS-3UTR GCA 90 bp CTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCAAGAGCTCTGAATGCTGGTGCTaGTCCCGTGACTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: LGAILCAFGQQSGRMPKSSECWC*SRDSRS
Trigger: GCTCCGGGAGTCACGGGAGCAGCACCAGCATTCAGA...GCTCTTGGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR GCA 90 bp AAGATGCAGCTCCAGAACTACAGCAAGACTAAGCCACTTCTCTGTGGGCCAGCCCTCTGTGGGCCAGCCTaGCTCGGACCTGCTTGTGAC +
Preference number: 4 (lower is better)
Translates to: KMQLQNYSKTKPLLCGPALCGPA*LGPACD
Trigger: GTCACAAGCAGGTCCGAGGCAGGCTGGCCCACAGAG...GGCTGGCCCACAGAGAAGTGGCTTAGTCTTGCTGTAGTTCTGGAGCTGCATCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS-3UTR CCA 90 bp CAATCTCTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCAGGGTGCCGGGGGAGTaGGGCAGCTTCATTTGCGAC +
Preference number: 4 (lower is better)
Translates to: QSLGAILCAFGQQSGRMPRVPGE*GSFICD
Trigger: GTCGCAAATGAAGCTGCCCCACTCCCCCGGCACCCT...GGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAGAGATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR GCA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTTGGGCTGCCTCAGGATaGCCACTCATGCTTCGGGCT +
Preference number: 4 (lower is better)
Translates to: SSTDSLLEQQDADREKQSWAASG*PLMLRA
Trigger: AGCCCGAAGCATGAGTGGGCATCCTGAGGCAGCCCA...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CAATCTCTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCGCGGACCATCTGGGCTaGCTCAGGATGCCCACTCAT +
Preference number: 4 (lower is better)
Translates to: QSLGAILCAFGQQSGRMPADHLG*LRMPTH
Trigger: ATGAGTGGGCATCCTGAGGCAGCCCAGATGGTCCGC...GGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAGAGATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CCA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGTCTCGGCGGACCATCTaGGCTGCCTCAGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: TLNSSTDSLLEQQDADRESRRTI*AASGCP
Trigger: TGGGCATCCTGAGGCAGCCCAGATGGTCCGCCGAGA...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp ACAGCAAGACTAAGCCACTTCTCTGTGGGCCAGCCTGCCTCGGACCTGCTTGTGCATGTGACTTCCATCTaGGGGGAGATGCCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: TARLSHFSVGQPASDLLVHVTSI*GEMPVE
Trigger: TTCAACAGGCATCTCCCCTCAGATGGAAGTCACATG...CACAAGCAGGTCCGAGGCAGGCTGGCCCACAGAGAAGTGGCTTAGTCTTGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS-3UTR TCA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAACTGGTGCTGCTCCCGTaGCTCCCGGAGCTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: DSLLEQQDADREKQSMYKLVLLP*LPELRE
Trigger: CTCTCTCAGCTCCGGGAGTCACGGGAGCAGCACCAG...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGGCGGACCATCTGGGCTaGCTCAGGATGCCCACTCAT +
Preference number: 4 (lower is better)
Translates to: TLNSSTDSLLEQQDADREADHLG*LRMPTH
Trigger: ATGAGTGGGCATCCTGAGGCAGCCCAGATGGTCCGC...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp ACAGCAAGACTAAGCCACTTCTCTGTGGGCCAGCCTGCCTCGGACCTGCTTGTGGTCTGGTCCATACTGTaGTTCATCATCCGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: TARLSHFSVGQPASDLLVVWSIL*FIIRQR
Trigger: TCTCTGCCGGATGATGAAGCACAGTATGGACCAGAC...CACAAGCAGGTCCGAGGCAGGCTGGCCCACAGAGAAGTGGCTTAGTCTTGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS-3UTR GCA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGACTAAAGCTGCAGGGTaGCGGGGGAGTGGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRTKAAG*RGSGAA
Trigger: AGCTGCCCCACTCCCCCGGCACCCTGCAGCTTTAGT...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGCCGTTTGAAACCGCTTaGGCCGCCGCACACCCCGCA +
Preference number: 4 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAEPFETA*AAAHPA
Trigger: TGCGGGGTGTGCGGCGGCCCAAGCGGTTTCAAACGG...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312055.9
CDS-3UTR CCA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATTCCCTGCGCCTCCTaGTGCAGCTGGTTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: SSTDSLLEQQDADREKQSIPCAS*CSWFPL
Trigger: AAGGGGAAACCAGCTGCACCAGGAGGCGCAGGGAAT...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGCAGGCTGGAATTTaGCTGGAGCGGACCCTCCCA +
Preference number: 4 (lower is better)
Translates to: SSTDSLLEQQDADREKQSMQAGI*LERTLP
Trigger: TGGGAGGGTCCGCTCCAGCCAAATTCCAGCCTGCAT...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACAGCAAGACTAAGCCACTTCTCTGTGGGCCAGCCTGCCTCGGACCTGCTTGTGGACTTGCTCCCAGTCTaGTCCATACTGTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: TARLSHFSVGQPASDLLVDLLPV*SILCFI
Trigger: GATGAAGCACAGTATGGACCAGACTGGGAGCAAGTC...CACAAGCAGGTCCGAGGCAGGCTGGCCCACAGAGAAGTGGCTTAGTCTTGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS-3UTR CCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGAGGGTGCCGGGGGAGTaGGGCAGCTTCATTTGCGAC +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTRVPGE*GSFICD
Trigger: GTCGCAAATGAAGCTGCCCCACTCCCCCGGCACCCT...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCTGGTGCTGCTCCCGTaGCTCCCGGAGCTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLELVLLP*LPELRE
Trigger: CTCTCTCAGCTCCGGGAGTCACGGGAGCAGCACCAG...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CAATCTCTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCGTTAGAATCCAGGTCTaGATGCTGGTGCTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: QSLGAILCAFGQQSGRMPVRIQV*MLVLLP
Trigger: CGGGAGCAGCACCAGCATTCAGACCTGGATTCTAAC...GGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAGAGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR TCA 90 bp CAGCTCCAGAACTACAGCAAGACTAAGCCACTTCTCTGTGGGCCAGCCTGCCTCTGTGACTACCCTCCCTaGACTGCACAGAAGAAAAGG +
Preference number: 4 (lower is better)
Translates to: QLQNYSKTKPLLCGPACLCDYPP*TAQKKR
Trigger: CCTTTTCTTCTGTGCAGTTCAGGGAGGGTAGTCACA...GAGGCAGGCTGGCCCACAGAGAAGTGGCTTAGTCTTGCTGTAGTTCTGGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS-3UTR GCA 90 bp ACAAGGAAGGATGAGATTTTTCTGCTCCCTAGGAGCTGTTTGTGGAGAGCAGGGGGTTCCAGTATTCCCTaGGCCTCCTGGTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: TRKDEIFLLPRSCLWRAGGSSIP*ASWCSW
Trigger: CCAGCTGCACCAGGAGGCGCAGGGAATACTGGAACC...CCCTGCTCTCCACAAACAGCTCCTAGGGAGCAGAAAAATCTCATCCTTCCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR GCA 90 bp ACAGCAAGACTAAGCCACTTCTCTGTGGGCCAGCCTGCCTCGGACCTGCTTGTGTGGAAATACGACCTTTaGCCTCCCTCTCCATCTCAA +
Preference number: 4 (lower is better)
Translates to: TARLSHFSVGQPASDLLVWKYDL*PPSPSQ
Trigger: TTGAGATGGAGAGGGAGGGCAAAGGTCGTATTTCCA...CACAAGCAGGTCCGAGGCAGGCTGGCCCACAGAGAAGTGGCTTAGTCTTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS-3UTR GCA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCTATGGAGGACACTGTaGTTGTGGGCGTGGGCACAC +
Preference number: 4 (lower is better)
Translates to: LNSSTDSLLEQQDADREKLWRTL*LWAWAH
Trigger: GTGTGCCCACGCCCACAAGCACAGTGTCCTCCATAG...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGCTATGGAGGACACTGTaGTTGTGGGCGTGGGCACAC +
Preference number: 4 (lower is better)
Translates to: TLNSSTDSLLEQQDADRELWRTL*LWAWAH
Trigger: GTGTGCCCACGCCCACAAGCACAGTGTCCTCCATAG...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGAGGTCTGAATGCTGGTaGTGCTCCCGTGACTCCCGG +
Preference number: 4 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRRSECW*CSRDSR
Trigger: CCGGGAGTCACGGGAGCAGCACCAGCATTCAGACCT...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGCGCCAAGCAGGGTTATaGCAGCAGTCCTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: TLNSSTDSLLEQQDADRERQAGL*QQSSQL
Trigger: CAGCTGTGAGGACTGCTGCCATAACCCTGCTTGGCG...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGGGTGCTGATGCAGGCTaGAATTTGGCTGGAGCGGAC +
Preference number: 4 (lower is better)
Translates to: LNSSTDSLLEQQDADREKGADAG*NLAGAD
Trigger: GTCCGCTCCAGCCAAATTCCAGCCTGCATCAGCACC...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGGGTGCTGATGCAGGCTaGAATTTGGCTGGAGCGGAC +
Preference number: 4 (lower is better)
Translates to: TLNSSTDSLLEQQDADREGADAG*NLAGAD
Trigger: GTCCGCTCCAGCCAAATTCCAGCCTGCATCAGCACC...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GAGTTTGCTGTGGAGCATGTCTGTGGAAGAGGCGACAGTAGGAACTGCTGGTTTATCATCCGGCAGAGATaGGCCTCCAGCTCAGACTCG +
Preference number: 4 (lower is better)
Translates to: EFAVEHVCGRGDSRNCWFIIRQR*ASSSDS
Trigger: CGAGTCTGAGCTGGAGGCCCATCTCTGCCGGATGAT...AAACCAGCAGTTCCTACTGTCGCCTCTTCCACAGACATGCTCCACAGCAAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525896.1
3UTR CAA 72 bp AGCCCAGCCAATCTCTGGGCGCAATCTTGTGTGCCTTaGGTCAGCAAAGTGGTAGGATGCCCAAGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SPANLWAQSCVP*VSKVVGCPRAS
Trigger: AGAAGCTCTTGGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAGAGATTGGCTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR GCA 90 bp CTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCAAGAGCTGGGCCCATGGCTACTaGCAGTTGTTGCAGGATATT +
Preference number: 4 (lower is better)
Translates to: LGAILCAFGQQSGRMPKSWAHGY*QLLQDI
Trigger: AATATCCTGCAACAACTGGCAGTAGCCATGGGCCCA...GCTCTTGGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR GCA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACTGGGCTGCCTCAGGATaGCCACTCATGCTTCGGGCT +
Preference number: 4 (lower is better)
Translates to: AFIQNTVTLQGDREELTNWAASG*PLMLRA
Trigger: AGCCCGAAGCATGAGTGGGCATCCTGAGGCAGCCCA...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp AGAACTACAGCAAGACTAAGCCACTTCTCTGTGGGCCAGCCTGCCTCGGACCTGCCATCTGAGGGGAGATaGCTGTTGAAGTGGAAATAC +
Preference number: 4 (lower is better)
Translates to: RTTARLSHFSVGQPASDLPSEGR*LLKWKY
Trigger: GTATTTCCACTTCAACAGGCATCTCCCCTCAGATGG...CAGGTCCGAGGCAGGCTGGCCCACAGAGAAGTGGCTTAGTCTTGCTGTAGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS-3UTR GCA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGTCTGAATGCTGGTGCTaGTCCCGTGACTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAESECWC*SRDSRS
Trigger: GCTCCGGGAGTCACGGGAGCAGCACCAGCATTCAGA...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GAACACAAATCTAGTTGTAGTGTGAGAACCACTGAAGCCCAGCCAATCTCTGGGAGGTCTGAATGCTGGTaGTGCTCCCGTGACTCCCGG +
Preference number: 4 (lower is better)
Translates to: EHKSSCSVRTTEAQPISGRSECW*CSRDSR
Trigger: CCGGGAGTCACGGGAGCAGCACCAGCATTCAGACCT...CCCAGAGATTGGCTGGGCTTCAGTGGTTCTCACACTACAACTAGATTTGTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR GCA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGACTAAAGCTGCAGGGTaGCGGGGGAGTGGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLETKAAG*RGSGAA
Trigger: AGCTGCCCCACTCCCCCGGCACCCTGCAGCTTTAGT...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACAAGGAAGGATGAGATTTTTCTGCTCCCTAGGAGCTGTTTGTGGAGAGCAGGGATTCCCTGCGCCTCCTaGTGCAGCTGGTTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: TRKDEIFLLPRSCLWRAGIPCAS*CSWFPL
Trigger: AAGGGGAAACCAGCTGCACCAGGAGGCGCAGGGAAT...CCCTGCTCTCCACAAACAGCTCCTAGGGAGCAGAAAAATCTCATCCTTCCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGATGCAGGCTGGAATTTaGCTGGAGCGGACCCTCCCA +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTMQAGI*LERTLP
Trigger: TGGGAGGGTCCGCTCCAGCCAAATTCCAGCCTGCAT...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGGGTGCTGATGCAGGCTaGAATTTGGCTGGAGCGGAC +
Preference number: 4 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRGADAG*NLAGAD
Trigger: GTCCGCTCCAGCCAAATTCCAGCCTGCATCAGCACC...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGATCATCCGGCAGAGATaGGCCTCCAGCTCAGACTCG +
Preference number: 4 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRIIRQR*ASSSDS
Trigger: CGAGTCTGAGCTGGAGGCCCATCTCTGCCGGATGAT...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGATCTTCAGCAGGTGCTaGTGCAGGCTGGAATTTGGC +
Preference number: 4 (lower is better)
Translates to: LNSSTDSLLEQQDADREKIFSRC*CRLEFG
Trigger: GCCAAATTCCAGCCTGCATCAGCACCTGCTGAAGAT...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTTGCTTCGGGCTTGGTTaGGTTTGGAAGACATGTCCT +
Preference number: 4 (lower is better)
Translates to: SSTDSLLEQQDADREKQSCFGLG*VWKTCP
Trigger: AGGACATGTCTTCCAAACTCAACCAAGCCCGAAGCA...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACCTGGTGCTGCTCCCGTaGCTCCCGGAGCTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDLVLLP*LPELRE
Trigger: CTCTCTCAGCTCCGGGAGTCACGGGAGCAGCACCAG...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGGTTAGAATCCAGGTCTaGATGCTGGTGCTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRVRIQV*MLVLLP
Trigger: CGGGAGCAGCACCAGCATTCAGACCTGGATTCTAAC...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACATCTGGGAACTAGACTaGGCAGAGAGGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: AFIQNTVTLQGDREELTNIWELD*AERGQL
Trigger: CAGCTGCCCCCTCTCTGCTCAGTCTAGTTCCCAGAT...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CTCTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCAAGATCATACAGAATACAGTaGCCCTTCAGGGCGACAGAG +
Preference number: 4 (lower is better)
Translates to: LWAQSCVPLVSKVVGCPRSYRIQ*PFRATE
Trigger: CTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGA...TCTTGGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR GCA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAACCAAGCGGCCTaGTCTAAGCCGTTTGAAACC +
Preference number: 4 (lower is better)
Translates to: LNSSTDSLLEQQDADREKQNQAA*SKPFET
Trigger: GGTTTCAAACGGCTTAGAGCAGGCCGCTTGGTTCTG...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312055.9
ENST00000529230.6
CDS-3UTR GCA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGGTTCCAGTATTCCCTaGGCCTCCTGGTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRGSSIP*ASWCSW
Trigger: CCAGCTGCACCAGGAGGCGCAGGGAATACTGGAACC...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCAGGTCTGAATGCTGGTaGTGCTCCCGTGACTCCCGG +
Preference number: 4 (lower is better)
Translates to: DADREKQSMYKYLCHNDSRSECW*CSRDSR
Trigger: CCGGGAGTCACGGGAGCAGCACCAGCATTCAGACCT...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp AAGATGCAGCTCCAGAACTACAGCAAGACTAAGCCACTTCTCTGTGGGCCAGCCCTACCCTCCCTGAACTaGACAGAAGAAAAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: KMQLQNYSKTKPLLCGPALPSLN*TEEKEQ
Trigger: CTGCTCCTTTTCTTCTGTGCAGTTCAGGGAGGGTAG...GGCTGGCCCACAGAGAAGTGGCTTAGTCTTGCTGTAGTTCTGGAGCTGCATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS-3UTR CCA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAGCAGTCCTCACAGCTaGGTTTGTTGCAGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: TLNSSTDSLLEQQDADRESSPHS*VCCSKS
Trigger: GCTCTTGCTGCAACAAACCCAGCTGTGAGGACTGCT...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACCGCCAAGCAGGGTTATaGCAGCAGTCCTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: AFIQNTVTLQGDREELTNRQAGL*QQSSQL
Trigger: CAGCTGTGAGGACTGCTGCCATAACCCTGCTTGGCG...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTGGAAATTCCTCTGGTTaGAGCAGGTGGACTTTGTCC +
Preference number: 4 (lower is better)
Translates to: SSTDSLLEQQDADREKQSGNSSG*SRWTLS
Trigger: GGACAAAGTCCACCTGCTCCAACCAGAGGAATTTCC...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CAATCTCTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCGGAAATTCCTCTGGTTaGAGCAGGTGGACTTTGTCC +
Preference number: 4 (lower is better)
Translates to: QSLGAILCAFGQQSGRMPGNSSG*SRWTLS
Trigger: GGACAAAGTCCACCTGCTCCAACCAGAGGAATTTCC...GGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAGAGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CCA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGAGGCTGGAATTTGGCTaGAGCGGACCCTCCCATTGG +
Preference number: 4 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAERLEFG*SGPSHW
Trigger: CCAATGGGAGGGTCCGCTCCAGCCAAATTCCAGCCT...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGTCTCGGCGGACCATCTaGGCTGCCTCAGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQSRRTI*AASGCP
Trigger: TGGGCATCCTGAGGCAGCCCAGATGGTCCGCCGAGA...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGCTTTTAGTACTCCAGTaGAGGCCTCCCGGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAELLVLQ*RPPGQG
Trigger: GCCTTGCCCGGGAGGCCTCCACTGGAGTACTAAAAG...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCAAGAGCAGAATTTGGGAGAACTaGCTGTTGCTAGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LGAILCAFGQQSGRMPKSRIWEN*LLLAGC
Trigger: ACAGCCTGCTAGCAACAGCCAGTTCTCCCAAATTCT...GCTCTTGGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CCA 90 bp CAGCTCCAGAACTACAGCAAGACTAAGCCACTTCTCTGTGGGCCAGCCTGCCTCGGTGGTCCAGGATCTTaGGCCCTTTTAATTTGCATA +
Preference number: 4 (lower is better)
Translates to: QLQNYSKTKPLLCGPACLGGPGS*ALLICI
Trigger: TATGCAAATTAAAAGGGCCCAAGATCCTGGACCACC...GAGGCAGGCTGGCCCACAGAGAAGTGGCTTAGTCTTGCTGTAGTTCTGGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS-3UTR CCA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAAATCATCCGGCAGAGATaGGCCTCCAGCTCAGACTCG +
Preference number: 4 (lower is better)
Translates to: DSLLEQQDADREKQSMYKIIRQR*ASSSDS
Trigger: CGAGTCTGAGCTGGAGGCCCATCTCTGCCGGATGAT...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAAGGGTGCCGGGGGAGTaGGGCAGCTTCATTTGCGAC +
Preference number: 4 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRARVPGE*GSFICD
Trigger: GTCGCAAATGAAGCTGCCCCACTCCCCCGGCACCCT...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCCGTTACAATGGTGTTaGGTGCAGCATTGCGTACAG +
Preference number: 4 (lower is better)
Translates to: LNSSTDSLLEQQDADREKPLQWC*VQHCVQ
Trigger: CTGTACGCAATGCTGCACTCAACACCATTGTAACGG...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp AAGATGCAGCTCCAGAACTACAGCAAGACTAAGCCACTTCTCTGTGGGCCAGCCAGGGGAGATGCCTGTTaGAGTGGAAATACGACCTTT +
Preference number: 4 (lower is better)
Translates to: KMQLQNYSKTKPLLCGPARGDAC*SGNTTF
Trigger: AAAGGTCGTATTTCCACTTCAACAGGCATCTCCCCT...GGCTGGCCCACAGAGAAGTGGCTTAGTCTTGCTGTAGTTCTGGAGCTGCATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS-3UTR TCA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGCATGTGACTTCCATCTaGGGGGAGATGCCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: TLNSSTDSLLEQQDADREHVTSI*GEMPVE
Trigger: TTCAACAGGCATCTCCCCTCAGATGGAAGTCACATG...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCATGTGACTTCCATCTaGGGGGAGATGCCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: LNSSTDSLLEQQDADREKHVTSI*GEMPVE
Trigger: TTCAACAGGCATCTCCCCTCAGATGGAAGTCACATG...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTACAGTTCCTGAAGAGTaGGTCTGGTTAGAATCCAGG +
Preference number: 4 (lower is better)
Translates to: SSTDSLLEQQDADREKQSTVPEE*VWLESR
Trigger: CCTGGATTCTAACCAGACTCACTCTTCAGGAACTGT...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGAGAGCAGCAGGACGCTaGCAGAGAGAAGCAGAGTAT +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTRAAGR*QREAEY
Trigger: ATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCT...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGAGAGCAGCAGGACGCTaGCAGAGAGAAGCAGAGTAT +
Preference number: 4 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRRAAGR*QREAEY
Trigger: ATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCT...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAATCTGGGAACTAGACTaGGCAGAGAGGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRIWELD*AERGQL
Trigger: CAGCTGCCCCCTCTCTGCTCAGTCTAGTTCCCAGAT...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGGTTCCAGTATTCCCTaGGCCTCCTGGTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRAGSSIP*ASWCSW
Trigger: CCAGCTGCACCAGGAGGCGCAGGGAATACTGGAACC...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCACAGCTGGGTTTGTTaGAGCAAGAGCTGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: LNSSTDSLLEQQDADREKHSWVC*SKSCLH
Trigger: GTGAAGACAGCTCTTGCTGCAACAAACCCAGCTGTG...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCAAGAGCGATCAACGACATCATTaGTCCCGTCATCTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: LGAILCAFGQQSGRMPKSDQRHH*SRHLVH
Trigger: ATGAACCAGATGACGGGAGCAATGATGTCGTTGATC...GCTCTTGGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR GCA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTGCTACTGCCAGTTGTTaGAGGATATTCAGCGTTTGC +
Preference number: 4 (lower is better)
Translates to: SSTDSLLEQQDADREKQSATASC*RIFSVC
Trigger: GCAAACGCTGAATATCCTGCAACAACTGGCAGTAGC...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CTCTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCAAGAGCTACTGCCAGTTGTTaGAGGATATTCAGCGTTTGC +
Preference number: 4 (lower is better)
Translates to: LWAQSCVPLVSKVVGCPRATASC*RIFSVC
Trigger: GCAAACGCTGAATATCCTGCAACAACTGGCAGTAGC...TCTTGGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR GCA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGTGGGCCCATGGCTACTaGCAGTTGTTGCAGGATATT +
Preference number: 4 (lower is better)
Translates to: TLNSSTDSLLEQQDADREWAHGY*QLLQDI
Trigger: AATATCCTGCAACAACTGGCAGTAGCCATGGGCCCA...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGCATGCCAGTCTGTTCTaGCCAAGCATTCACAGTCGC +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTHASLF*PSIHSR
Trigger: GCGACTGTGAATGCTTGGGCAGAACAGACTGGCATG...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGGCGGACCATCTGGGCTaGCTCAGGATGCCCACTCAT +
Preference number: 4 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQADHLG*LRMPTH
Trigger: ATGAGTGGGCATCCTGAGGCAGCCCAGATGGTCCGC...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGGTCTGGTCCATACTGTaGTTCATCATCCGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LNSSTDSLLEQQDADREKVWSIL*FIIRQR
Trigger: TCTCTGCCGGATGATGAAGCACAGTATGGACCAGAC...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GCTGTGGAGCATGTCTGTGGAAGAGGCGACAGTAGGAACTGCTGGTTTGGAGAGTTTCCTTATCAGACTTaGTCCCAGTCTGGTCCATAC +
Preference number: 4 (lower is better)
Translates to: AVEHVCGRGDSRNCWFGEFPYQT*SQSGPY
Trigger: GTATGGACCAGACTGGGAGCAAGTCTGATAAGGAAA...CTCTCCAAACCAGCAGTTCCTACTGTCGCCTCTTCCACAGACATGCTCCACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS-3UTR GCA 90 bp CAATCTCTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCTGGAAATACGACCTTTaGCCTCCCTCTCCATCTCAA +
Preference number: 4 (lower is better)
Translates to: QSLGAILCAFGQQSGRMPWKYDL*PPSPSQ
Trigger: TTGAGATGGAGAGGGAGGGCAAAGGTCGTATTTCCA...GGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAGAGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR GCA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCCTATGGAGGACACTGTaGTTGTGGGCGTGGGCACAC +
Preference number: 4 (lower is better)
Translates to: DADREKQSMYKYLCHNDSLWRTL*LWAWAH
Trigger: GTGTGCCCACGCCCACAAGCACAGTGTCCTCCATAG...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGGGAGCTGAGAGAGTTTaGTGTGGAGCATGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRGAERV*CGACLW
Trigger: CCACAGACATGCTCCACAGCAAACTCTCTCAGCTCC...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATCCTCACTAATGCCTaGCATGGCATTTCAGTTCGG +
Preference number: 4 (lower is better)
Translates to: SSTDSLLEQQDADREKQSILTNA*HGISVR
Trigger: CCGAACTGAAATGCCATGCCAGGCATTAGTGAGGAT...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCGCCAAGCAGGGTTATaGCAGCAGTCCTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLERQAGL*QQSSQL
Trigger: CAGCTGTGAGGACTGCTGCCATAACCCTGCTTGGCG...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTCTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCAAGAAATTCTGCATCTATCTaGGATAGGAGGGCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: LWAQSCVPLVSKVVGCPRNSASI*DRRAGF
Trigger: GAAGCCTGCCCTCCTATCCCAGATAGATGCAGAATT...TCTTGGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CCA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGGGAAATTCCTCTGGTTaGAGCAGGTGGACTTTGTCC +
Preference number: 4 (lower is better)
Translates to: TLNSSTDSLLEQQDADREGNSSG*SRWTLS
Trigger: GGACAAAGTCCACCTGCTCCAACCAGAGGAATTTCC...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATTGCTCCCGTCATCTaGTTCATCTCCATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SSTDSLLEQQDADREKQSIAPVI*FISIFS
Trigger: GGAGAAGATGGAGATGAACCAGATGACGGGAGCAAT...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCAAGAGCACCCTTCAAGGCAGTTaGAAGTTCACCTATATTCGG +
Preference number: 4 (lower is better)
Translates to: LGAILCAFGQQSGRMPKSTLQGS*KFTYIR
Trigger: CCGAATATAGGTGAACTTCCAACTGCCTTGAAGGGT...GCTCTTGGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CCA 90 bp ACAAGGAAGGATGAGATTTTTCTGCTCCCTAGGAGCTGTTTGTGGAGAGCAGGGAGTTGCTTTAGTGGGTaGAGCAGGCTTGGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: TRKDEIFLLPRSCLWRAGSCFSG*SRLGWH
Trigger: ATGCCAGCCAAGCCTGCTCCACCCACTAAAGCAACT...CCCTGCTCTCCACAAACAGCTCCTAGGGAGCAGAAAAATCTCATCCTTCCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CCA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCAGGCTGGAATTTGGCTaGAGCGGACCCTCCCATTGG +
Preference number: 4 (lower is better)
Translates to: DADREKQSMYKYLCHNDSRLEFG*SGPSHW
Trigger: CCAATGGGAGGGTCCGCTCCAGCCAAATTCCAGCCT...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGTCATCTAGATCCAGCTaGAATTCTCGGCGGACCATC +
Preference number: 4 (lower is better)
Translates to: TLNSSTDSLLEQQDADRESSRSS*NSRRTI
Trigger: GATGGTCCGCCGAGAATTCCAGCTGGATCTAGATGA...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCAAGAGCGGTGGTCCAGGATCTTaGGCCCTTTTAATTTGCATA +
Preference number: 4 (lower is better)
Translates to: LGAILCAFGQQSGRMPKSGGPGS*ALLICI
Trigger: TATGCAAATTAAAAGGGCCCAAGATCCTGGACCACC...GCTCTTGGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CCA 90 bp GCTGTGGAGCATGTCTGTGGAAGAGGCGACAGTAGGAACTGCTGGTTTGGAGAGCATTTGTGTTACCTATaGAGGACACTGTGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: AVEHVCGRGDSRNCWFGEHLCYL*RTLCLW
Trigger: CCACAAGCACAGTGTCCTCCATAGGTAACACAAATG...CTCTCCAAACCAGCAGTTCCTACTGTCGCCTCTTCCACAGACATGCTCCACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS-3UTR CCA 90 bp CTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCAAGAGCCATTTGTGTTACCTATaGAGGACACTGTGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: LGAILCAFGQQSGRMPKSHLCYL*RTLCLW
Trigger: CCACAAGCACAGTGTCCTCCATAGGTAACACAAATG...GCTCTTGGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR TCA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGTTCAGGAGCTCTTCTTaGACAGCCTCTCCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: TLNSSTDSLLEQQDADREFRSSS*TASPFS
Trigger: TGAGAAAGGAGAGGCTGTTCAAGAAGAGCTCCTGAA...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACATCTTCAGCAGGTGCTaGTGCAGGCTGGAATTTGGC +
Preference number: 4 (lower is better)
Translates to: AFIQNTVTLQGDREELTNIFSRC*CRLEFG
Trigger: GCCAAATTCCAGCCTGCATCAGCACCTGCTGAAGAT...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGAGAGGGTCTCTTTGCTaGCCGCTTAATCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAERGSLC*PLNPLL
Trigger: GAGGAGAGGATTAAGCGGTCAGCAAAGAGACCCTCT...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGGTTCACAGAGCGGATaGCCTGTTGTCCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAEGSQSG*PVVLPQ
Trigger: TTGAGGAAGGACAACAGGTCATCCGCTCTGTGAACC...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGGATGTTGGTCTGGTCTaGCTTCTCCAGAACCTTCAC +
Preference number: 4 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRDVGLV*LLQNLH
Trigger: GTGAAGGTTCTGGAGAAGTCAGACCAGACCAACATC...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCGTTAGAATCCAGGTCTaGATGCTGGTGCTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: DADREKQSMYKYLCHNDSVRIQV*MLVLLP
Trigger: CGGGAGCAGCACCAGCATTCAGACCTGGATTCTAAC...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGACAGTTCCTGAAGAGTaGGTCTGGTTAGAATCCAGG +
Preference number: 4 (lower is better)
Translates to: TLNSSTDSLLEQQDADRETVPEE*VWLESR
Trigger: CCTGGATTCTAACCAGACTCACTCTTCAGGAACTGT...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAAATACTTGTGCCACAATaGCTCCTCCCCCTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: DSLLEQQDADREKQSMYKILVPQ*LLPLAP
Trigger: TGGAGCTAGGGGGAGGAGTCATTGTGGCACAAGTAT...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAATCTGGGAACTAGACTaGGCAGAGAGGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRAIWELD*AERGQL
Trigger: CAGCTGCCCCCTCTCTGCTCAGTCTAGTTCCCAGAT...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGTCATACAGAATACAGTaGCCCTTCAGGGCGACAGAG +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTSYRIQ*PFRATE
Trigger: CTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGA...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CTCTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCAAGAGCAAGGCTCTCTATCTaGAACAGCGAAATCATGTTG +
Preference number: 4 (lower is better)
Translates to: LWAQSCVPLVSKVVGCPRARLSI*NSEIML
Trigger: CAACATGATTTCGCTGTTTCAGATAGAGAGCCTTGC...TCTTGGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR GCA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAGGTCCTGGTTTGGGTaGAGAAATGTCCTTTGTGTC +
Preference number: 4 (lower is better)
Translates to: TLNSSTDSLLEQQDADRERSWFG*RNVLCV
Trigger: GACACAAAGGACATTTCTGCACCCAAACCAGGACCT...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTACAGGCTTCGGCTATTaGTGTCATAGCTTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: SSTDSLLEQQDADREKQSTGFGY*CHSFFC
Trigger: GCAAAAGAAGCTATGACAGCAATAGCCGAAGCCTGT...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAACATGCCAGTCTGTTCTaGCCAAGCATTCACAGTCGC +
Preference number: 4 (lower is better)
Translates to: DSLLEQQDADREKQSMYKHASLF*PSIHSR
Trigger: GCGACTGTGAATGCTTGGGCAGAACAGACTGGCATG...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CTCTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCAAGACTCTTCCAGGCACTCTaGTCTCTGCTTAGAGTTTTT +
Preference number: 4 (lower is better)
Translates to: LWAQSCVPLVSKVVGCPRLFQAL*SLLRVF
Trigger: AAAAACTCTAAGCAGAGAGCAGAGTGCCTGGAAGAG...TCTTGGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR GCA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGGGAGCTTATGTTCTGTaGACGCTGAGGTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: TLNSSTDSLLEQQDADREGAYVL*TLRFLF
Trigger: GAAGAGAAACCTCAGCGTGCACAGAACATAAGCTCC...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGCCTCAGCTGGTCCCTTaGGTAACATGTTGGCATTGG +
Preference number: 4 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAEPQLVP*VTCWHW
Trigger: CCAATGCCAACATGTTACGCAAGGGACCAGCTGAGG...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACGGAGCTGAGAGAGTTTaGTGTGGAGCATGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: AFIQNTVTLQGDREELTNGAERV*CGACLW
Trigger: CCACAGACATGCTCCACAGCAAACTCTCTCAGCTCC...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CTGGTTTGGAGAGCAAAGAGGTCAAAGGAGGTCGGTCATCTTGCTATTGAGAGAGGAGCTGAGAGAGTTTaGTGTGGAGCATGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: LVWRAKRSKEVGHLAIERGAERV*CGACLW
Trigger: CCACAGACATGCTCCACAGCAAACTCTCTCAGCTCC...TCTCTCAATAGCAAGATGACCGACCTCCTTTGACCTCTTTGCTCTCCAAACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS-3UTR GCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACTCTGAATGCTGGTGCTaGTCCCGTGACTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDSECWC*SRDSRS
Trigger: GCTCCGGGAGTCACGGGAGCAGCACCAGCATTCAGA...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GAACACAAATCTAGTTGTAGTGTGAGAACCACTGAAGCCCAGCCAATCTCTGGGGAGTATTTCCTCAGCTaGGTCAGAACCAAGCGGCCT +
Preference number: 4 (lower is better)
Translates to: EHKSSCSVRTTEAQPISGEYFLS*VRTKRP
Trigger: AGGCCGCTTGGTTCTGACCCAGCTGAGGAAATACTC...CCCAGAGATTGGCTGGGCTTCAGTGGTTCTCACACTACAACTAGATTTGTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CCA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGATTCCCTGCGCCTCCTaGTGCAGCTGGTTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQIPCAS*CSWFPL
Trigger: AAGGGGAAACCAGCTGCACCAGGAGGCGCAGGGAAT...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTTCCATCCAGGTTTCTTaGCTAGCATCCTCACTAATG +
Preference number: 4 (lower is better)
Translates to: SSTDSLLEQQDADREKQSSIQVS*LASSLM
Trigger: CATTAGTGAGGATGCTAGCCAAGAAACCTGGATGGA...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGATTGCTCCCGTCATCTaGTTCATCTCCATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TLNSSTDSLLEQQDADREIAPVI*FISIFS
Trigger: GGAGAAGATGGAGATGAACCAGATGACGGGAGCAAT...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGAATGGCAAGGCATCTTaGGCCTTCTTTCGCACATCT +
Preference number: 4 (lower is better)
Translates to: LNSSTDSLLEQQDADREKNGKAS*AFFRTS
Trigger: AGATGTGCGAAAGAAGGCCCAAGATGCCTTGCCATT...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGAGTTGCTTTAGTGGGTaGAGCAGGCTTGGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAESCFSG*SRLGWH
Trigger: ATGCCAGCCAAGCCTGCTCCACCCACTAAAGCAACT...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTACATCCGGTTCAGGATaGCACGAACATCTTTACGAA +
Preference number: 4 (lower is better)
Translates to: SSTDSLLEQQDADREKQSTSGSG*HEHLYE
Trigger: TTCGTAAAGATGTTCGTGCCATCCTGAACCGGATGT...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CAATCTCTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCACATCCGGTTCAGGATaGCACGAACATCTTTACGAA +
Preference number: 4 (lower is better)
Translates to: QSLGAILCAFGQQSGRMPTSGSG*HEHLYE
Trigger: TTCGTAAAGATGTTCGTGCCATCCTGAACCGGATGT...GGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAGAGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CCA 90 bp ACAAGGAAGGATGAGATTTTTCTGCTCCCTAGGAGCTGTTTGTGGAGAGCAGGGGGCTTTTCCTGGGGTTaGTTGGCAAACATTCATGCC +
Preference number: 4 (lower is better)
Translates to: TRKDEIFLLPRSCLWRAGGFSWG*LANIHA
Trigger: GGCATGAATGTTTGCCAACCAACCCCAGGAAAAGCC...CCCTGCTCTCCACAAACAGCTCCTAGGGAGCAGAAAAATCTCATCCTTCCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CCA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCTCATGCTTCGGGCTTaGTTGAGTTTGGAAGACATG +
Preference number: 4 (lower is better)
Translates to: LNSSTDSLLEQQDADREKLMLRA*LSLEDM
Trigger: CATGTCTTCCAAACTCAACCAAGCCCGAAGCATGAG...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGTCTCGGCGGACCATCTaGGCTGCCTCAGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: TYNQFVYTRPAEAILNYESRRTI*AASGCP
Trigger: TGGGCATCCTGAGGCAGCCCAGATGGTCCGCCGAGA...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAAGGGCACTCAGGATGTTaGTCTGGTCTGACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: DSLLEQQDADREKQSMYKGHSGC*SGLTSP
Trigger: TGGAGAAGTCAGACCAGACCAACATCCTGAGTGCCC...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACGGGCACTCAGGATGTTaGTCTGGTCTGACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: AFIQNTVTLQGDREELTNGHSGC*SGLTSP
Trigger: TGGAGAAGTCAGACCAGACCAACATCCTGAGTGCCC...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACAAGGAAGGATGAGATTTTTCTGCTCCCTAGGAGCTGTTTGTGGAGAGCAGGGGCTAGCAGGCTGTCTTaGAGCAAAACAAGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: TRKDEIFLLPRSCLWRAGASRLS*SKTSRA
Trigger: TGCCCTACTTGTTTTGCTCCAAGACAGCCTGCTAGC...CCCTGCTCTCCACAAACAGCTCCTAGGGAGCAGAAAAATCTCATCCTTCCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CCA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAGAATTTGGGAGAACTaGCTGTTGCTAGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: TLNSSTDSLLEQQDADRERIWEN*LLLAGC
Trigger: ACAGCCTGCTAGCAACAGCCAGTTCTCCCAAATTCT...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTCAAGCTCTGAGAATTTaGGAGAACTGGCTGTTGCTA +
Preference number: 4 (lower is better)
Translates to: SSTDSLLEQQDADREKQSQALRI*ENWLLL
Trigger: TAGCAACAGCCAGTTCTCCCAAATTCTCAGAGCTTG...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGATCATCCGGCAGAGATaGGCCTCCAGCTCAGACTCG +
Preference number: 4 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQIIRQR*ASSSDS
Trigger: CGAGTCTGAGCTGGAGGCCCATCTCTGCCGGATGAT...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGTCCAGGTCTGAATGCTaGTGCTGCTCCCGTGACTCC +
Preference number: 4 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQSRSEC*CCSRDS
Trigger: GGAGTCACGGGAGCAGCACCAGCATTCAGACCTGGA...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCATCCAGGTCTGAATGCTaGTGCTGCTCCCGTGACTCC +
Preference number: 4 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRASRSEC*CCSRDS
Trigger: GGAGTCACGGGAGCAGCACCAGCATTCAGACCTGGA...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp ACAAGGAAGGATGAGATTTTTCTGCTCCCTAGGAGCTGTTTGTGGAGAGCAGGGTTCAGGAGCTCTTCTTaGACAGCCTCTCCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: TRKDEIFLLPRSCLWRAGFRSSS*TASPFS
Trigger: TGAGAAAGGAGAGGCTGTTCAAGAAGAGCTCCTGAA...CCCTGCTCTCCACAAACAGCTCCTAGGGAGCAGAAAAATCTCATCCTTCCTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR TCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGCAAATGCGGCATCTCTaGCTTCAGGAGCAGAATCAT +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTQMRHL*LQEQNH
Trigger: ATGATTCTGCTCCTGAAGTCAGAGATGCCGCATTTG...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAACCGTTACAATGGTGTTaGGTGCAGCATTGCGTACAG +
Preference number: 4 (lower is better)
Translates to: DSLLEQQDADREKQSMYKPLQWC*VQHCVQ
Trigger: CTGTACGCAATGCTGCACTCAACACCATTGTAACGG...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGAGAGGGTCTCTTTGCTaGCCGCTTAATCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLERGSLC*PLNPLL
Trigger: GAGGAGAGGATTAAGCGGTCAGCAAAGAGACCCTCT...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCAGAGGGTCTCTTTGCTaGCCGCTTAATCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: DADREKQSMYKYLCHNDSRGSLC*PLNPLL
Trigger: GAGGAGAGGATTAAGCGGTCAGCAAAGAGACCCTCT...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGATGTTCTGTGCACGCTaGGGTTTCTCTTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAEMFCAR*GFSSTC
Trigger: ACAGGTGGAAGAGAAACCTCAGCGTGCACAGAACAT...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGCTTGGATACTTGTGTTaGTGTCACCACTGGCTACTT +
Preference number: 4 (lower is better)
Translates to: TLNSSTDSLLEQQDADRELGYLC*CHHWLL
Trigger: AAGTAGCCAGTGGTGACATCAACACAAGTATCCAAG...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCAAGGCTCTCTATCTaGAACAGCTGTGTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAEARLSI*NSCVRA
Trigger: AGCTCTGACACAGCTGTTTCAGATAGAGAGCCTTGC...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312055.9
ENST00000354558.7
CDS-3UTR TCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGAGGGGAGATGCCTGTTaGAGTGGAAATACGACCTTT +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTRGDAC*SGNTTF
Trigger: AAAGGTCGTATTTCCACTTCAACAGGCATCTCCCCT...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGTCATACAGAATACAGTaGCCCTTCAGGGCGACAGAG +
Preference number: 4 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAESYRIQ*PFRATE
Trigger: CTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGA...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CAATCTCTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCTCCTGTGGTTTTTCCTaGTACATGGGCATTTTCAAC +
Preference number: 4 (lower is better)
Translates to: QSLGAILCAFGQQSGRMPSCGFS*YMGIFN
Trigger: GTTGAAAATGCCCATGTAGCAGGAAAAACCACAGGA...GGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAGAGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR GCA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAAAGCAGTACCCAATaGTTCAAATGCGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: LNSSTDSLLEQQDADREKQSSTQ*FKCGIS
Trigger: AGAGATGCCGCATTTGAAGCATTGGGTACTGCTTTG...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTCATCTGTACCACTTGTaGTATGCTTGGAAATTCCTC +
Preference number: 4 (lower is better)
Translates to: SSTDSLLEQQDADREKQSHLYHL*YAWKFL
Trigger: GAGGAATTTCCAAGCATAGCACAAGTGGTACAGATG...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGACATGCCAGTCTGTTCTaGCCAAGCATTCACAGTCGC +
Preference number: 4 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRHASLF*PSIHSR
Trigger: GCGACTGTGAATGCTTGGGCAGAACAGACTGGCATG...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGACCAGCCATTCCTTCATaGCAGTCTGTTCTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRPAIPS*QSVLPK
Trigger: CTTGGGCAGAACAGACTGGCATGAAGGAATGGCTGG...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCAGCCCAGAAGCTCTTaGCTCAAGAAAGGATTTTCC +
Preference number: 4 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRQPRSS*LKKGFS
Trigger: GGAAAATCCTTTCTTGAGGCAAGAGCTTCTGGGCTG...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCTCTTCCAGGCACTCTaGTCTCTGCTTAGAGTTTTT +
Preference number: 4 (lower is better)
Translates to: LNSSTDSLLEQQDADREKLFQAL*SLLRVF
Trigger: AAAAACTCTAAGCAGAGAGCAGAGTGCCTGGAAGAG...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTTCCTCTCCTCGAGCATaGTCATATCCTTTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: SSTDSLLEQQDADREKQSSSPRA*SYPFQK
Trigger: TTTCTGAAAAGGATATGAGCATGCTCGAGGAGAGGA...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGGAGCTTATGTTCTGTaGACGCTGAGGTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTGAYVL*TLRFLF
Trigger: GAAGAGAAACCTCAGCGTGCACAGAACATAAGCTCC...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCCTCAGCTGGTCCCTTaGGTAACATGTTGGCATTGG +
Preference number: 4 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLEPQLVP*VTCWHW
Trigger: CCAATGCCAACATGTTACGCAAGGGACCAGCTGAGG...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGTGGGCCCTTTTAATTTaGATAAGGTGTGTAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LNSSTDSLLEQQDADREKWALLI*IRCVAG
Trigger: CCCTGCTACACACCTTATGCAAATTAAAAGGGCCCA...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGTGGAAATACGACCTTTaGCCTCCCTCTCCATCTCAA +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTWKYDL*PPSPSQ
Trigger: TTGAGATGGAGAGGGAGGGCAAAGGTCGTATTTCCA...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGCCATCTGAGGGGAGATaGCTGTTGAAGTGGAAATAC +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTPSEGR*LLKWKY
Trigger: GTATTTCCACTTCAACAGGCATCTCCCCTCAGATGG...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGTCTAGGAGCACTTGTTaGCAGTTTGACCCATTCTTC +
Preference number: 4 (lower is better)
Translates to: TLNSSTDSLLEQQDADRESRSTC*QFDPFF
Trigger: GAAGAATGGGTCAAACTGCCAACAAGTGCTCCTAGA...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTTTTCTCCAAGATGGTTaGCACAACATGTCCTGCATA +
Preference number: 4 (lower is better)
Translates to: SSTDSLLEQQDADREKQSFLQDG*HNMSCI
Trigger: TATGCAGGACATGTTGTGCCAACCATCTTGGAGAAA...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAAGCAGTCCTCACAGCTaGGTTTGTTGCAGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRSSPHS*VCCSKS
Trigger: GCTCTTGCTGCAACAAACCCAGCTGTGAGGACTGCT...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGAATTCTGCATCTATCTaGGATAGGAGGGCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRNSASI*DRRAGF
Trigger: GAAGCCTGCCCTCCTATCCCAGATAGATGCAGAATT...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGATTGCTCCCGTCATCTaGTTCATCTCCATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRIAPVI*FISIFS
Trigger: GGAGAAGATGGAGATGAACCAGATGACGGGAGCAAT...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGAATGGCAAGGCATCTTaGGCCTTCTTTCGCACATCT +
Preference number: 4 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRNGKAS*AFFRTS
Trigger: AGATGTGCGAAAGAAGGCCCAAGATGCCTTGCCATT...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGAGTTGCTTTAGTGGGTaGAGCAGGCTTGGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLESCFSG*SRLGWH
Trigger: ATGCCAGCCAAGCCTGCTCCACCCACTAAAGCAACT...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACAGGCTGGAATTTGGCTaGAGCGGACCCTCCCATTGG +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDRLEFG*SGPSHW
Trigger: CCAATGGGAGGGTCCGCTCCAGCCAAATTCCAGCCT...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCAAGAGCTTTTTGGATCAGGTTTaGGTTCTGTACTGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: LGAILCAFGQQSGRMPKSFLDQV*VLYCWK
Trigger: TTTCCAGCAGTACAGAACCCAAACCTGATCCAAAAA...GCTCTTGGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGAAACATCTTGCTAGCTaGGTAGACAAGGCACATCCG +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTKHLAS*VDKAHP
Trigger: CGGATGTGCCTTGTCTACCCAGCTAGCAAGATGTTT...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACGGCTTTTCCTGGGGTTaGTTGGCAAACATTCATGCC +
Preference number: 4 (lower is better)
Translates to: AFIQNTVTLQGDREELTNGFSWG*LANIHA
Trigger: GGCATGAATGTTTGCCAACCAACCCCAGGAAAAGCC...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGTTCCACCTGTTTTATTaGTGCAGCAGAGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: LNSSTDSLLEQQDADREKFHLFY*CSRGSL
Trigger: AAGAGACCCTCTGCTGCACCAATAAAACAGGTGGAA...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCTCATGCTTCGGGCTTaGTTGAGTTTGGAAGACATG +
Preference number: 4 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRLMLRA*LSLEDM
Trigger: CATGTCTTCCAAACTCAACCAAGCCCGAAGCATGAG...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACCTTTTAGTACTCCAGTaGAGGCCTCCCGGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDLLVLQ*RPPGQG
Trigger: GCCTTGCCCGGGAGGCCTCCACTGGAGTACTAAAAG...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAACTCAGGATGTTGGTCTaGTCTGACTTCTCCAGAACC +
Preference number: 4 (lower is better)
Translates to: DSLLEQQDADREKQSMYKLRMLV*SDFSRT
Trigger: GGTTCTGGAGAAGTCAGACCAGACCAACATCCTGAG...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGCAAGCTCTGAGAATTTaGGAGAACTGGCTGTTGCTA +
Preference number: 4 (lower is better)
Translates to: TLNSSTDSLLEQQDADREQALRI*ENWLLL
Trigger: TAGCAACAGCCAGTTCTCCCAAATTCTCAGAGCTTG...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGGGTGGTCCAGGATCTTaGGCCCTTTTAATTTGCATA +
Preference number: 4 (lower is better)
Translates to: LNSSTDSLLEQQDADREKGGPGS*ALLICI
Trigger: TATGCAAATTAAAAGGGCCCAAGATCCTGGACCACC...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGACTTGCTCCCAGTCTaGTCCATACTGTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAEDLLPV*SILCFI
Trigger: GATGAAGCACAGTATGGACCAGACTGGGAGCAAGTC...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GAGCATGTCTGTGGAAGAGGCGACAGTAGGAACTGCTGGTTTGGAGAGCAAAGAAGATGCCTGTTGAAGTaGAAATACGACCTTTGCCCT +
Preference number: 4 (lower is better)
Translates to: EHVCGRGDSRNCWFGEQRRCLLK*KYDLCP
Trigger: AGGGCAAAGGTCGTATTTCCACTTCAACAGGCATCT...TCTTTGCTCTCCAAACCAGCAGTTCCTACTGTCGCCTCTTCCACAGACATGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS-3UTR CCA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCATTTGTGTTACCTATaGAGGACACTGTGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: LNSSTDSLLEQQDADREKHLCYL*RTLCLW
Trigger: CCACAAGCACAGTGTCCTCCATAGGTAACACAAATG...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTAGGAACTGCTaGTTTGGAGAGCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTDSRNC*FGEQRG
Trigger: ACCTCTTTGCTCTCCAAACCAGCAGTTCCTACTGTC...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACTCCAGGTCTGAATGCTaGTGCTGCTCCCGTGACTCC +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDSRSEC*CCSRDS
Trigger: GGAGTCACGGGAGCAGCACCAGCATTCAGACCTGGA...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCAATATGGCCGGACATaGCTTCAGCTTTGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRQYGRT*LQLCLP
Trigger: AGGAAGACAAAGCTGAAGCCATGTCCGGCCATATTG...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CCA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAAGCCCAGCCAATCTCTaGGCGCAATCTTGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRASPANL*AQSCVP
Trigger: AGGCACACAAGATTGCGCCCAGAGATTGGCTGGGCT...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR TCA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACCCAAAGCCACCAACATaGCATTGGTGTCCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: AFIQNTVTLQGDREELTNPKPPT*HWCPFQ
Trigger: TTGGAAAGGACACCAATGTCATGTTGGTGGCTTTGG...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGAGGGCTTGTACCACTTaGGGTTTCTTCTCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: LNSSTDSLLEQQDADREKRACTT*GFFSLN
Trigger: ATTCAAAGAGAAGAAACCTCAAGTGGTACAAGCCCT...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAGGGCTTGTACCACTTaGGGTTTCTTCTCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: TLNSSTDSLLEQQDADRERACTT*GFFSLN
Trigger: ATTCAAAGAGAAGAAACCTCAAGTGGTACAAGCCCT...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACCAAATGCGGCATCTCTaGCTTCAGGAGCAGAATCAT +
Preference number: 4 (lower is better)
Translates to: AFIQNTVTLQGDREELTNQMRHL*LQEQNH
Trigger: ATGATTCTGCTCCTGAAGTCAGAGATGCCGCATTTG...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTCCATCTAATACAACCTaGGCTGACGTTTTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: SSTDSLLEQQDADREKQSPSNTT*ADVLEK
Trigger: TTTTTCCAAAACGTCAGCTCAGGTTGTATTAGATGG...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTTTTTATTTGAATCATTaGGTCGACCCTTCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: SSTDSLLEQQDADREKQSFYLNH*VDPSRQ
Trigger: CTGCCTTGAAGGGTCGACTCAATGATTCAAATAAAA...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAATCTTCAGCAGGTGCTaGTGCAGGCTGGAATTTGGC +
Preference number: 4 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRAIFSRC*CRLEFG
Trigger: GCCAAATTCCAGCCTGCATCAGCACCTGCTGAAGAT...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGCGACAAGATAGGGGATaGAGGAAGATGCTTCATTCT +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTRQDRG*RKMLHS
Trigger: AGAATGAAGCATCTTCCTTCATCCCCTATCTTGTCG...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGGATTTCCAATCAGTTTaGACACCTGATCCCCATGTA +
Preference number: 4 (lower is better)
Translates to: TLNSSTDSLLEQQDADREDFQSV*TPDPHV
Trigger: TACATGGGGATCAGGTGTTCAAACTGATTGGAAATC...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCATGTTCTGTGCACGCTaGGGTTTCTCTTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: DADREKQSMYKYLCHNDSMFCAR*GFSSTC
Trigger: ACAGGTGGAAGAGAAACCTCAGCGTGCACAGAACAT...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCTGCTTCGGGCTTGGTTaGGTTTGGAAGACATGTCCT +
Preference number: 4 (lower is better)
Translates to: DADREKQSMYKYLCHNDSCFGLG*VWKTCP
Trigger: AGGACATGTCTTCCAAACTCAACCAAGCCCGAAGCA...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCTTGGATACTTGTGTTaGTGTCACCACTGGCTACTT +
Preference number: 4 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRLGYLC*CHHWLL
Trigger: AAGTAGCCAGTGGTGACATCAACACAAGTATCCAAG...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGGTTCACAGAGCGGATaGCCTGTTGTCCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRAGSQSG*PVVLPQ
Trigger: TTGAGGAAGGACAACAGGTCATCCGCTCTGTGAACC...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGGATGTTGGTCTGGTCTaGCTTCTCCAGAACCTTCAC +
Preference number: 4 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLEDVGLV*LLQNLH
Trigger: GTGAAGGTTCTGGAGAAGTCAGACCAGACCAACATC...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCTTCATAACAAGCTCTaGGAATTTGGGAGAACTGGC +
Preference number: 4 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRLHNKL*EFGRTG
Trigger: GCCAGTTCTCCCAAATTCTCAGAGCTTGTTATGAAG...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGTGGGGAAGACCTTCATaGAAATGTGGATATCCAGAA +
Preference number: 4 (lower is better)
Translates to: TLNSSTDSLLEQQDADREWGRPS*KCGYPE
Trigger: TTCTGGATATCCACATTTTCATGAAGGTCTTCCCCA...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGAGGGGAGATGCCTGTTaGAGTGGAAATACGACCTTT +
Preference number: 4 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAERGDAC*SGNTTF
Trigger: AAAGGTCGTATTTCCACTTCAACAGGCATCTCCCCT...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACCCTAGCTCCACGGCATaGTACATACAACCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: AFIQNTVTLQGDREELTNPSSTA*YIQPVC
Trigger: ACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGG...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCACTGCCCAACACTCCATaGTATGGAGCATCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRALPNTP*YGASWE
Trigger: CTCCCAAGATGCTCCATATCATGGAGTGTTGGGCAG...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR GCA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGGGTAGTAAGGAAGATTaGATCAATTGCCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRGSKED*INCLLQ
Trigger: CTGCAGGAGGCAATTGATGCAATCTTCCTTACTACC...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCAAAGCAGTACCCAATaGTTCAAATGCGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRQSSTQ*FKCGIS
Trigger: AGAGATGCCGCATTTGAAGCATTGGGTACTGCTTTG...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACAGGTCCTGGTTTGGGTaGAGAAATGTCCTTTGTGTC +
Preference number: 4 (lower is better)
Translates to: AFIQNTVTLQGDREELTNRSWFG*RNVLCV
Trigger: GACACAAAGGACATTTCTGCACCCAAACCAGGACCT...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGGGTGGACTTTGTCCCTaGATCTTCTCAAATTCTGCA +
Preference number: 4 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRGGLCP*IFSNSA
Trigger: TGCAGAATTTGAGAAGATGCAGGGACAAAGTCCACC...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGGTGGACTTTGTCCCTaGATCTTCTCAAATTCTGCA +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTGGLCP*IFSNSA
Trigger: TGCAGAATTTGAGAAGATGCAGGGACAAAGTCCACC...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGGTACCACTTGTGCTATaGTTGGAAATTCCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: LNSSTDSLLEQQDADREKVPLVL*LEIPLV
Trigger: AACCAGAGGAATTTCCAAGCATAGCACAAGTGGTAC...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACGCTACTGCCAGTTGTTaGAGGATATTCAGCGTTTGC +
Preference number: 4 (lower is better)
Translates to: AFIQNTVTLQGDREELTNATASC*RIFSVC
Trigger: GCAAACGCTGAATATCCTGCAACAACTGGCAGTAGC...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCACCAGCCATTCCTTCATaGCAGTCTGTTCTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRAPAIPS*QSVLPK
Trigger: CTTGGGCAGAACAGACTGGCATGAAGGAATGGCTGG...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGCCTTTAAGCTGGTTTTaGTTGGCATCTTCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: TLNSSTDSLLEQQDADREPLSWF*LASSSL
Trigger: AAGGGAAGAAGATGCCAAGCAAAACCAGCTTAAAGG...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCCTTTAAGCTGGTTTTaGTTGGCATCTTCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: LNSSTDSLLEQQDADREKPLSWF*LASSSL
Trigger: AAGGGAAGAAGATGCCAAGCAAAACCAGCTTAAAGG...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGCTCTTCCAGGCACTCTaGTCTCTGCTTAGAGTTTTT +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTLFQAL*SLLRVF
Trigger: AAAAACTCTAAGCAGAGAGCAGAGTGCCTGGAAGAG...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGGTTGGCAAACATTCATaGCATAGGACTCAACCAGAC +
Preference number: 4 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRVGKHS*HRTQPD
Trigger: GTCTGGTTGAGTCCTATGGCATGAATGTTTGCCAAC...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGTACAATGGTGTTGAGTaGAGCATTGCGTACAGCATT +
Preference number: 4 (lower is better)
Translates to: TLNSSTDSLLEQQDADREYNGVE*SIAYSI
Trigger: AATGCTGTACGCAATGCTGCACTCAACACCATTGTA...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACCACCTGTTTTATTGGTaGAGCAGAGGGTCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: AFIQNTVTLQGDREELTNHLFYW*SRGSLC
Trigger: GCAAAGAGACCCTCTGCTGCACCAATAAAACAGGTG...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGGATGCTGTATTACTGTaGATGTCATCGAAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: TLNSSTDSLLEQQDADREDAVLL*MSSKCG
Trigger: TCCACACTTCGATGACATGCACAGTAATACAGCATC...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGTGGGCCCTTTTAATTTaGATAAGGTGTGTAGCAGGG +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTWALLI*IRCVAG
Trigger: CCCTGCTACACACCTTATGCAAATTAAAAGGGCCCA...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAACCATCTGAGGGGAGATaGCTGTTGAAGTGGAAATAC +
Preference number: 4 (lower is better)
Translates to: DSLLEQQDADREKQSMYKPSEGR*LLKWKY
Trigger: GTATTTCCACTTCAACAGGCATCTCCCCTCAGATGG...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGAGCTTCATTTGCGACTaGTCTTTATTCTCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: LNSSTDSLLEQQDADREKSFICD*SLFSPV
Trigger: GACTGGAGAGAATAAAGAGCAGTCGCAAATGAAGCT...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGATGTACAAATACTTGTaGCACAATGACTCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRMYKYL*HNDSSP
Trigger: GGGGGAGGAGTCATTGTGGCACAAGTATTTGTACAT...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGAGTATTTCCTCAGCTaGGTCAGAACCAAGCGGCCT +
Preference number: 4 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRAEYFLS*VRTKRP
Trigger: AGGCCGCTTGGTTCTGACCCAGCTGAGGAAATACTC...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312055.9
ENST00000529230.6
CDS-3UTR CCA 90 bp ACAAGGAAGGATGAGATTTTTCTGCTCCCTAGGAGCTGTTTGTGGAGAGCAGGGTCTAGGAGCACTTGTTaGCAGTTTGACCCATTCTTC +
Preference number: 4 (lower is better)
Translates to: TRKDEIFLLPRSCLWRAGSRSTC*QFDPFF
Trigger: GAAGAATGGGTCAAACTGCCAACAAGTGCTCCTAGA...CCCTGCTCTCCACAAACAGCTCCTAGGGAGCAGAAAAATCTCATCCTTCCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGTAGAAGCAGTGCAGTaGCGGAAACTTCTTGCAATA +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTVEAVQ*RKLLAI
Trigger: TATTGCAAGAAGTTTCCGCCACTGCACTGCTTCTAC...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGTTAGAGGTCCTGGTTTaGGTGCAGAAATGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRLEVLV*VQKCPL
Trigger: CAAAGGACATTTCTGCACCCAAACCAGGACCTCTAA...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAAGCAGTCCTCACAGCTaGGTTTGTTGCAGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRASSPHS*VCCSKS
Trigger: GCTCTTGCTGCAACAAACCCAGCTGTGAGGACTGCT...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCTCTGGTTGGAGCAGGTaGACTTTGTCCCTGCATCTT +
Preference number: 4 (lower is better)
Translates to: DADREKQSMYKYLCHNDSSGWSR*TLSLHL
Trigger: AAGATGCAGGGACAAAGTCCACCTGCTCCAACCAGA...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCACTTGTGCTATGCTTaGAAATTCCTCTGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRHLCYA*KFLWLE
Trigger: CTCCAACCAGAGGAATTTCCAAGCATAGCACAAGTG...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGCACTTGTGCTATGCTTaGAAATTCCTCTGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTHLCYA*KFLWLE
Trigger: CTCCAACCAGAGGAATTTCCAAGCATAGCACAAGTG...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGATGTTGCTTAATATTTaGGCCCATGGCTACTGCCAG +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTMLLNI*AHGYCQ
Trigger: CTGGCAGTAGCCATGGGCCCAAATATTAAGCAACAT...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACTGGAGCAGGCTTGGCTaGCATGTTAACTTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: AFIQNTVTLQGDREELTNWSRLG*HVNFGF
Trigger: AAAGCCAAAGTTAACATGCCAGCCAAGCCTGCTCCA...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGAGCGGACCCTCCCATTaGTTTAGAAGTTGCTTTAGT +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTSGPSH*FRSCFS
Trigger: ACTAAAGCAACTTCTAAACCAATGGGAGGGTCCGCT...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGATGCAGGCTGGAATTTaGCTGGAGCGGACCCTCCCA +
Preference number: 4 (lower is better)
Translates to: TYNQFVYTRPAEAILNYEMQAGI*LERTLP
Trigger: TGGGAGGGTCCGCTCCAGCCAAATTCCAGCCTGCAT...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGACGAATGACATCCTTTaGTTCTCCAACCTTGACGAC +
Preference number: 4 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRTNDIL*FSNLDD
Trigger: GTCGTCAAGGTTGGAGAACCAAAGGATGTCATTCGT...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGGTAACATGTTGGCATTaGAGCTTATGTTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: LNSSTDSLLEQQDADREKVTCWH*SLCSVH
Trigger: GTGCACAGAACATAAGCTCCAATGCCAACATGTTAC...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGCTCATGCTTCGGGCTTaGTTGAGTTTGGAAGACATG +
Preference number: 4 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAELMLRA*LSLEDM
Trigger: CATGTCTTCCAAACTCAACCAAGCCCGAAGCATGAG...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGCTTTTAGTACTCCAGTaGAGGCCTCCCGGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: TYNQFVYTRPAEAILNYELLVLQ*RPPGQG
Trigger: GCCTTGCCCGGGAGGCCTCCACTGGAGTACTAAAAG...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGACTCAGGATGTTGGTCTaGTCTGACTTCTCCAGAACC +
Preference number: 4 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRLRMLV*SDFSRT
Trigger: GGTTCTGGAGAAGTCAGACCAGACCAACATCCTGAG...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCCTCAGGATGTTGGTCTaGTCTGACTTCTCCAGAACC +
Preference number: 4 (lower is better)
Translates to: DADREKQSMYKYLCHNDSLRMLV*SDFSRT
Trigger: GGTTCTGGAGAAGTCAGACCAGACCAACATCCTGAG...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCGCTAGCAGGCTGTCTTaGAGCAAAACAAGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: DADREKQSMYKYLCHNDSASRLS*SKTSRA
Trigger: TGCCCTACTTGTTTTGCTCCAAGACAGCCTGCTAGC...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGAGATGCCTGTTGAAGTaGAAATACGACCTTTGCCCT +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTRCLLK*KYDLCP
Trigger: AGGGCAAAGGTCGTATTTCCACTTCAACAGGCATCT...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GTTTGGAGAGCAAAGAGGTCAAAGGAGGTCGGTCATCTTGCTATTGAGAGAAGGGACAGTAGGAACTGCTaGTTTGGAGAGCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: VWRAKRSKEVGHLAIERRDSRNC*FGEQRG
Trigger: ACCTCTTTGCTCTCCAAACCAGCAGTTCCTACTGTC...CCTTCTCTCAATAGCAAGATGACCGACCTCCTTTGACCTCTTTGCTCTCCAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS-3UTR CCA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCACCTAGGAGCTGTTTGTaGAGAGCAGGGAAGGAGAGT +
Preference number: 4 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRAPRSCL*RAGKES
Trigger: ACTCTCCTTCCCTGCTCTCCACAAACAGCTCCTAGG...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR TCA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTTCTAATCCTTTCAATTaGACCACTGCATTGGAATCA +
Preference number: 4 (lower is better)
Translates to: SSTDSLLEQQDADREKQSSNPFN*TTALES
Trigger: TGATTCCAATGCAGTGGTTCAATTGAAAGGATTAGA...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CAATCTCTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCGCTTTAGCTTTAGGTTaGTTGAACACCTTACTTACA +
Preference number: 4 (lower is better)
Translates to: QSLGAILCAFGQQSGRMPALALG*LNTLLT
Trigger: TGTAAGTAAGGTGTTCAATCAACCTAAAGCTAAAGC...GGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAGAGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR TCA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCCAAAGCCACCAACATaGCATTGGTGTCCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLEPKPPT*HWCPFQ
Trigger: TTGGAAAGGACACCAATGTCATGTTGGTGGCTTTGG...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CTCTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCAAGAGAGATGTCTGCTGCTTaGTGGTTGGATTTTTATTAT +
Preference number: 4 (lower is better)
Translates to: LWAQSCVPLVSKVVGCPREMSAA*WLDFYY
Trigger: ATAATAAAAATCCAACCATCAAGCAGCAGACATCTC...TCTTGGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR TCA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCCAAATGCGGCATCTCTaGCTTCAGGAGCAGAATCAT +
Preference number: 4 (lower is better)
Translates to: DADREKQSMYKYLCHNDSQMRHL*LQEQNH
Trigger: ATGATTCTGCTCCTGAAGTCAGAGATGCCGCATTTG...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGAGGGGGAAGAACAGCTaGAGCTTTTTCTTCACATAC +
Preference number: 4 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAERGKNS*SFFFTY
Trigger: GTATGTGAAGAAAAAGCTTCAGCTGTTCTTCCCCCT...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCCATCTAATACAACCTaGGCTGACGTTTTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: LNSSTDSLLEQQDADREKPSNTT*ADVLEK
Trigger: TTTTTCCAAAACGTCAGCTCAGGTTGTATTAGATGG...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGGAACATCTTTACGAATaGCATCCTTTGGTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: LNSSTDSLLEQQDADREKEHLYE*HPLVLQ
Trigger: TTGGAGAACCAAAGGATGTCATTCGTAAAGATGTTC...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGTGCTTCGGGCTTGGTTaGGTTTGGAAGACATGTCCT +
Preference number: 4 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQCFGLG*VWKTCP
Trigger: AGGACATGTCTTCCAAACTCAACCAAGCCCGAAGCA...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAAGGCTCTCTATCTaGAACAGCTGTGTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRAARLSI*NSCVRA
Trigger: AGCTCTGACACAGCTGTTTCAGATAGAGAGCCTTGC...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312055.9
ENST00000354558.7
CDS-3UTR TCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACGGTTCACAGAGCGGATaGCCTGTTGTCCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDGSQSG*PVVLPQ
Trigger: TTGAGGAAGGACAACAGGTCATCCGCTCTGTGAACC...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCCTAGCTCCACGGCATaGTACATACAACCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLEPSSTA*YIQPVC
Trigger: ACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGG...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGACCTAGCTCCACGGCATaGTACATACAACCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRPSSTA*YIQPVC
Trigger: ACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGG...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACATACTTGTGCCACAATaGCTCCTCCCCCTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDILVPQ*LLPLAP
Trigger: TGGAGCTAGGGGGAGGAGTCATTGTGGCACAAGTAT...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCTTTCTCTAACTGGCTaGATACCCAGCTGGTACCAA +
Preference number: 4 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLELSLTG*IPSWYQ
Trigger: TTGGTACCAGCTGGGTATTCAGCCAGTTAGAGAAAG...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR GCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGTGTCATCTCCCATTGTaGTTCCAGGTTTTCCTTAGA +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTCHLPL*FQVFLR
Trigger: TCTAAGGAAAACCTGGAAGCACAATGGGAGATGACA...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGTCCTGTGGTTTTTCCTaGTACATGGGCATTTTCAAC +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTSCGFS*YMGIFN
Trigger: GTTGAAAATGCCCATGTAGCAGGAAAAACCACAGGA...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGGTAGTAAGGAAGATTaGATCAATTGCCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAEGSKED*INCLLQ
Trigger: CTGCAGGAGGCAATTGATGCAATCTTCCTTACTACC...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GAACACAAATCTAGTTGTAGTGTGAGAACCACTGAAGCCCAGCCAATCTCTGGGGGTAGTAAGGAAGATTaGATCAATTGCCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: EHKSSCSVRTTEAQPISGGSKED*INCLLQ
Trigger: CTGCAGGAGGCAATTGATGCAATCTTCCTTACTACC...CCCAGAGATTGGCTGGGCTTCAGTGGTTCTCACACTACAACTAGATTTGTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR GCA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGGTGGCGGAAACTTCTTaGAATAAAAAGAGATGTCTG +
Preference number: 4 (lower is better)
Translates to: LNSSTDSLLEQQDADREKVAETS*NKKRCL
Trigger: CAGACATCTCTTTTTATTGCAAGAAGTTTCCGCCAC...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAAGGTCCTGGTTTGGGTaGAGAAATGTCCTTTGTGTC +
Preference number: 4 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRRSWFG*RNVLCV
Trigger: GACACAAAGGACATTTCTGCACCCAAACCAGGACCT...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CAATCTCTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCTGTCATAGCTTCTTTTaGATTGTTCCCACATTTCAC +
Preference number: 4 (lower is better)
Translates to: QSLGAILCAFGQQSGRMPCHSFF*IVPTFH
Trigger: GTGAAATGTGGGAACAATGCAAAAGAAGCTATGACA...GGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAGAGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR GCA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGACAGGCTTCGGCTATTaGTGTCATAGCTTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAETGFGY*CHSFFC
Trigger: GCAAAAGAAGCTATGACAGCAATAGCCGAAGCCTGT...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCACAGCTGGGTTTGTTaGAGCAAGAGCTGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQHSWVC*SKSCLH
Trigger: GTGAAGACAGCTCTTGCTGCAACAAACCCAGCTGTG...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGTACCACTTGTGCTATaGTTGGAAATTCCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTVPLVL*LEIPLV
Trigger: AACCAGAGGAATTTCCAAGCATAGCACAAGTGGTAC...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACGATCAACGACATCATTaGTCCCGTCATCTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: AFIQNTVTLQGDREELTNDQRHH*SRHLVH
Trigger: ATGAACCAGATGACGGGAGCAATGATGTCGTTGATC...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGACAGCCCAGAAGCTCTTaGCTCAAGAAAGGATTTTCC +
Preference number: 4 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRQPRSS*LKKGFS
Trigger: GGAAAATCCTTTCTTGAGGCAAGAGCTTCTGGGCTG...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCCCAGAAGCTCTTaGCTCAAGAAAGGATTTTCC +
Preference number: 4 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLEQPRSS*LKKGFS
Trigger: GGAAAATCCTTTCTTGAGGCAAGAGCTTCTGGGCTG...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGGTTTGGGTTCTGTACTaGTGGAAATACAATCTTCAG +
Preference number: 4 (lower is better)
Translates to: LNSSTDSLLEQQDADREKVWVLY*WKYNLQ
Trigger: CTGAAGATTGTATTTCCAGCAGTACAGAACCCAAAC...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGCCTTTAAGCTGGTTTTaGTTGGCATCTTCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTPLSWF*LASSSL
Trigger: AAGGGAAGAAGATGCCAAGCAAAACCAGCTTAAAGG...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGAGGCACTCTGCTCTCTaGTTAGAGTTTTTGGATTTG +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTRHSAL*LEFLDL
Trigger: CAAATCCAAAAACTCTAAGCAGAGAGCAGAGTGCCT...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGTTGGCAAACATTCATaGCATAGGACTCAACCAGAC +
Preference number: 4 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAEVGKHS*HRTQPD
Trigger: GTCTGGTTGAGTCCTATGGCATGAATGTTTGCCAAC...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGAAGGTGATGAGGCCATaGATTAGGTCTTTTAGTACT +
Preference number: 4 (lower is better)
Translates to: LNSSTDSLLEQQDADREKKVMRP*IRSFST
Trigger: AGTACTAAAAGACCTAATGCATGGCCTCATCACCTT...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAATTTCCTTATCAGACTTaGTCCCAGTCTGGTCCATAC +
Preference number: 4 (lower is better)
Translates to: DSLLEQQDADREKQSMYKFPYQT*SQSGPY
Trigger: GTATGGACCAGACTGGGAGCAAGTCTGATAAGGAAA...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTTTCATCTATTCGAGATaGTCCCTTTTCTGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: SSTDSLLEQQDADREKQSFIYSR*SLFCFL
Trigger: AAGGAAACAGAAAAGGGAGCATCTCGAATAGATGAA...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp AATGAACACAAATCTAGTTGTAGTGTGAGAACCACTGAAGCCCAGCCAATCTCTGGAGCTGAGAGAGTTTaGTGTGGAGCATGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: NEHKSSCSVRTTEAQPISGAERV*CGACLW
Trigger: CCACAGACATGCTCCACAGCAAACTCTCTCAGCTCC...AGAGATTGGCTGGGCTTCAGTGGTTCTCACACTACAACTAGATTTGTGTTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR GCA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGTGGGGCAGCTTCATTTaGGACTGCTCTTTATTCTCT +
Preference number: 4 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAEWGSFI*DCSLFS
Trigger: AGAGAATAAAGAGCAGTCGCAAATGAAGCTGCCCCA...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGACATTTCTGATCAACTaGCAGTTTCAACCACTCACT +
Preference number: 4 (lower is better)
Translates to: TLNSSTDSLLEQQDADRETFLIN*QFQPLT
Trigger: AGTGAGTGGTTGAAACTGCCAGTTGATCAGAAATGT...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CAATCTCTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCAAATTTGGACCACTCTaGGCTCTTTTCATCCTTTAT +
Preference number: 4 (lower is better)
Translates to: QSLGAILCAFGQQSGRMPKFGPL*ALFILY
Trigger: ATAAAGGATGAAAAGAGCCCAGAGTGGTCCAAATTT...GGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAGAGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CCA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAAACACAACTTCTCCTGTaGTTTTTCCTGCTACATGGG +
Preference number: 4 (lower is better)
Translates to: DSLLEQQDADREKQSMYKTQLLL*FFLLHG
Trigger: CCCATGTAGCAGGAAAAACCACAGGAGAAGTTGTGT...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGCCACAGCAATTAGTTTaGCTTCATCTCGAACAGCCT +
Preference number: 4 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAEPQQLV*LHLEQP
Trigger: AGGCTGTTCGAGATGAAGCCAAACTAATTGCTGTGG...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTAGTCTTTGGGAAGTTTaGAAAGGATTTCTACAGCTT +
Preference number: 4 (lower is better)
Translates to: SSTDSLLEQQDADREKQSSLWEV*KGFLQL
Trigger: AAGCTGTAGAAATCCTTTCCAAACTTCCCAAAGACT...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGTTTCTCCAAGATGGTTaGCACAACATGTCCTGCATA +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTFLQDG*HNMSCI
Trigger: TATGCAGGACATGTTGTGCCAACCATCTTGGAGAAA...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAAGTAGAAGCAGTGCAGTaGCGGAAACTTCTTGCAATA +
Preference number: 4 (lower is better)
Translates to: DSLLEQQDADREKQSMYKVEAVQ*RKLLAI
Trigger: TATTGCAAGAAGTTTCCGCCACTGCACTGCTTCTAC...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACTTAGAGGTCCTGGTTTaGGTGCAGAAATGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: AFIQNTVTLQGDREELTNLEVLV*VQKCPL
Trigger: CAAAGGACATTTCTGCACCCAAACCAGGACCTCTAA...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAATTAGAGGTCCTGGTTTaGGTGCAGAAATGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: DSLLEQQDADREKQSMYKLEVLV*VQKCPL
Trigger: CAAAGGACATTTCTGCACCCAAACCAGGACCTCTAA...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGAATTCTGCATCTATCTaGGATAGGAGGGCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLENSASI*DRRAGF
Trigger: GAAGCCTGCCCTCCTATCCCAGATAGATGCAGAATT...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGTCTGGTTGGAGCAGGTaGACTTTGTCCCTGCATCTT +
Preference number: 4 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQSGWSR*TLSLHL
Trigger: AAGATGCAGGGACAAAGTCCACCTGCTCCAACCAGA...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCTTGGAAATTCCTCTaGTTGGAGCAGGTGGACTTT +
Preference number: 4 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRAWKFL*LEQVDF
Trigger: AAAGTCCACCTGCTCCAACCAGAGGAATTTCCAAGC...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGATGTTGCTTAATATTTaGGCCCATGGCTACTGCCAG +
Preference number: 4 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAEMLLNI*AHGYCQ
Trigger: CTGGCAGTAGCCATGGGCCCAAATATTAAGCAACAT...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCAATGGCAAGGCATCTTaGGCCTTCTTTCGCACATCT +
Preference number: 4 (lower is better)
Translates to: DADREKQSMYKYLCHNDSNGKAS*AFFRTS
Trigger: AGATGTGCGAAAGAAGGCCCAAGATGCCTTGCCATT...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGTGGAGCAGGCTTGGCTaGCATGTTAACTTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLEWSRLG*HVNFGF
Trigger: AAAGCCAAAGTTAACATGCCAGCCAAGCCTGCTCCA...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACAGCGGACCCTCCCATTaGTTTAGAAGTTGCTTTAGT +
Preference number: 4 (lower is better)
Translates to: AFIQNTVTLQGDREELTNSGPSH*FRSCFS
Trigger: ACTAAAGCAACTTCTAAACCAATGGGAGGGTCCGCT...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAAAGCGGACCCTCCCATTaGTTTAGAAGTTGCTTTAGT +
Preference number: 4 (lower is better)
Translates to: DSLLEQQDADREKQSMYKSGPSH*FRSCFS
Trigger: ACTAAAGCAACTTCTAAACCAATGGGAGGGTCCGCT...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGTGGGTTCTGTACTGCTaGAAATACAATCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRWVLYC*KYNLQQ
Trigger: CTGCTGAAGATTGTATTTCCAGCAGTACAGAACCCA...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGGGCTTTTCCTGGGGTTaGTTGGCAAACATTCATGCC +
Preference number: 4 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQGFSWG*LANIHA
Trigger: GGCATGAATGTTTGCCAACCAACCCCAGGAAAAGCC...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAAGTGCTGAACAAGTTCTaGCATTTCACATCGGACTGT +
Preference number: 4 (lower is better)
Translates to: DSLLEQQDADREKQSMYKVLNKF*HFTSDC
Trigger: ACAGTCCGATGTGAAATGCCAGAACTTGTTCAGCAC...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGACATGTCATCGAAGTGTaGAGAAACAGCCCGGATCTT +
Preference number: 4 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRHVIEV*RNSPDL
Trigger: AAGATCCGGGCTGTTTCTCCACACTTCGATGACATG...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCCATGTCATCGAAGTGTaGAGAAACAGCCCGGATCTT +
Preference number: 4 (lower is better)
Translates to: DADREKQSMYKYLCHNDSHVIEV*RNSPDL
Trigger: AAGATCCGGGCTGTTTCTCCACACTTCGATGACATG...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCTAGCAGGCTGTCTTaGAGCAAAACAAGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRAASRLS*SKTSRA
Trigger: TGCCCTACTTGTTTTGCTCCAAGACAGCCTGCTAGC...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGAGAATTTGGGAGAACTaGCTGTTGCTAGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLERIWEN*LLLAGC
Trigger: ACAGCCTGCTAGCAACAGCCAGTTCTCCCAAATTCT...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGACTTGCTCCCAGTCTaGTCCATACTGTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRADLLPV*SILCFI
Trigger: GATGAAGCACAGTATGGACCAGACTGGGAGCAAGTC...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGAGATGCCTGTTGAAGTaGAAATACGACCTTTGCCCT +
Preference number: 4 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAERCLLK*KYDLCP
Trigger: AGGGCAAAGGTCGTATTTCCACTTCAACAGGCATCT...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGGACAGTAGGAACTGCTaGTTTGGAGAGCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLEDSRNC*FGEQRG
Trigger: ACCTCTTTGCTCTCCAAACCAGCAGTTCCTACTGTC...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCATTCAGGAGCTCTTCTTaGACAGCCTCTCCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRAFRSSS*TASPFS
Trigger: TGAGAAAGGAGAGGCTGTTCAAGAAGAGCTCCTGAA...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAACACTTGTTGGCAGTTTaGCCCATTCTTCTTCTAGTT +
Preference number: 4 (lower is better)
Translates to: DSLLEQQDADREKQSMYKHLLAV*PILLLV
Trigger: AACTAGAAGAAGAATGGGTCAAACTGCCAACAAGTG...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGCACTTGTTGGCAGTTTaGCCCATTCTTCTTCTAGTT +
Preference number: 4 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAEHLLAV*PILLLV
Trigger: AACTAGAAGAAGAATGGGTCAAACTGCCAACAAGTG...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGATGATGCTGAAAGTCTaGGTGAAACATCTCATCTTG +
Preference number: 4 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRMMLKV*VKHLIL
Trigger: CAAGATGAGATGTTTCACTCAGACTTTCAGCATCAT...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCCGACAAGATAGGGGATaGAGGAAGATGCTTCATTCT +
Preference number: 4 (lower is better)
Translates to: DADREKQSMYKYLCHNDSRQDRG*RKMLHS
Trigger: AGAATGAAGCATCTTCCTTCATCCCCTATCTTGTCG...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACCCGTTACAATGGTGTTaGGTGCAGCATTGCGTACAG +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDPLQWC*VQHCVQ
Trigger: CTGTACGCAATGCTGCACTCAACACCATTGTAACGG...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACATCAGTTTGAACACCTaGTCCCCATGTACATTGTAC +
Preference number: 4 (lower is better)
Translates to: AFIQNTVTLQGDREELTNISLNT*SPCTLY
Trigger: GTACAATGTACATGGGGATCAGGTGTTCAAACTGAT...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACATGTTCTGTGCACGCTaGGGTTTCTCTTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDMFCAR*GFSSTC
Trigger: ACAGGTGGAAGAGAAACCTCAGCGTGCACAGAACAT...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACCATGTGACTTCCATCTaGGGGGAGATGCCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDHVTSI*GEMPVE
Trigger: TTCAACAGGCATCTCCCCTCAGATGGAAGTCACATG...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGACAGTTCCTGAAGAGTaGGTCTGGTTAGAATCCAGG +
Preference number: 4 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQTVPEE*VWLESR
Trigger: CCTGGATTCTAACCAGACTCACTCTTCAGGAACTGT...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGATACTTGTGCCACAATaGCTCCTCCCCCTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: TYNQFVYTRPAEAILNYEILVPQ*LLPLAP
Trigger: TGGAGCTAGGGGGAGGAGTCATTGTGGCACAAGTAT...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGAGAGCAGCAGGACGCTaGCAGAGAGAAGCAGAGTAT +
Preference number: 4 (lower is better)
Translates to: TYNQFVYTRPAEAILNYERAAGR*QREAEY
Trigger: ATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCT...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGGTGGCTATCAGAAACTaGTCAATATGGCCGGACATG +
Preference number: 4 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQVAIRN*SIWPDM
Trigger: CATGTCCGGCCATATTGATCAGTTTCTGATAGCCAC...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR GCA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGCAGAACCAAGCGGCCTaGTCTAAGCCGTTTGAAACC +
Preference number: 4 (lower is better)
Translates to: TYNQFVYTRPAEAILNYEQNQAA*SKPFET
Trigger: GGTTTCAAACGGCTTAGAGCAGGCCGCTTGGTTCTG...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312055.9
ENST00000529230.6
CDS-3UTR GCA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACTGTCATCTCCCATTGTaGTTCCAGGTTTTCCTTAGA +
Preference number: 4 (lower is better)
Translates to: AFIQNTVTLQGDREELTNCHLPL*FQVFLR
Trigger: TCTAAGGAAAACCTGGAAGCACAATGGGAGATGACA...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGAGTAAGACATTTTGCTaGCAAAGCCACCAACATGAC +
Preference number: 4 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAESKTFC*QSHQHD
Trigger: GTCATGTTGGTGGCTTTGGCAGCAAAATGTCTTACT...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGTGGCGGAAACTTCTTaGAATAAAAAGAGATGTCTG +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTVAETS*NKKRCL
Trigger: CAGACATCTCTTTTTATTGCAAGAAGTTTCCGCCAC...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGATCAACGACATCATTaGTCCCGTCATCTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRDQRHH*SRHLVH
Trigger: ATGAACCAGATGACGGGAGCAATGATGTCGTTGATC...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTCGGTTGGATAAATTTTaGGTCATTAATAATACCTGC +
Preference number: 4 (lower is better)
Translates to: SSTDSLLEQQDADREKQSRLDKF*VINNTC
Trigger: GCAGGTATTATTAATGACGCAAAATTTATCCAACCG...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACTGGGCCCATGGCTACTaGCAGTTGTTGCAGGATATT +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDWAHGY*QLLQDI
Trigger: AATATCCTGCAACAACTGGCAGTAGCCATGGGCCCA...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAATCCTCTCCTCGAGCATaGTCATATCCTTTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: DSLLEQQDADREKQSMYKSSPRA*SYPFQK
Trigger: TTTCTGAAAAGGATATGAGCATGCTCGAGGAGAGGA...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCACACCTGTTTTATTGGTaGAGCAGAGGGTCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRAHLFYW*SRGSLC
Trigger: GCAAAGAGACCCTCTGCTGCACCAATAAAACAGGTG...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACGATGCTGTATTACTGTaGATGTCATCGAAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: AFIQNTVTLQGDREELTNDAVLL*MSSKCG
Trigger: TCCACACTTCGATGACATGCACAGTAATACAGCATC...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGAAGGTGATGAGGCCATaGATTAGGTCTTTTAGTACT +
Preference number: 4 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRKVMRP*IRSFST
Trigger: AGTACTAAAAGACCTAATGCATGGCCTCATCACCTT...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGTTCATCTATTCGAGATaGTCCCTTTTCTGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: TLNSSTDSLLEQQDADREFIYSR*SLFCFL
Trigger: AAGGAAACAGAAAAGGGAGCATCTCGAATAGATGAA...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGTGGGGCAGCTTCATTTaGGACTGCTCTTTATTCTCT +
Preference number: 4 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLEWGSFI*DCSLFS
Trigger: AGAGAATAAAGAGCAGTCGCAAATGAAGCTGCCCCA...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAATGTACAAATACTTGTaGCACAATGACTCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRMYKYL*HNDSSP
Trigger: GGGGGAGGAGTCATTGTGGCACAAGTATTTGTACAT...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGACATTTCTGATCAACTaGCAGTTTCAACCACTCACT +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTTFLIN*QFQPLT
Trigger: AGTGAGTGGTTGAAACTGCCAGTTGATCAGAAATGT...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGTCAATCCTAAAAATTTaGACCACTCTGGGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: TLNSSTDSLLEQQDADRESILKI*TTLGSF
Trigger: AAAAGAGCCCAGAGTGGTCCAAATTTTTAGGATTGA...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGACCACAGCAATTAGTTTaGCTTCATCTCGAACAGCCT +
Preference number: 4 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRPQQLV*LHLEQP
Trigger: AGGCTGTTCGAGATGAAGCCAAACTAATTGCTGTGG...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCCCACAGCAATTAGTTTaGCTTCATCTCGAACAGCCT +
Preference number: 4 (lower is better)
Translates to: DADREKQSMYKYLCHNDSPQQLV*LHLEQP
Trigger: AGGCTGTTCGAGATGAAGCCAAACTAATTGCTGTGG...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGTCTAGGAGCACTTGTTaGCAGTTTGACCCATTCTTC +
Preference number: 4 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLESRSTC*QFDPFF
Trigger: GAAGAATGGGTCAAACTGCCAACAAGTGCTCCTAGA...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAATTTCTCCAAGATGGTTaGCACAACATGTCCTGCATA +
Preference number: 4 (lower is better)
Translates to: DSLLEQQDADREKQSMYKFLQDG*HNMSCI
Trigger: TATGCAGGACATGTTGTGCCAACCATCTTGGAGAAA...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTCTGCTGCTTGATGGTTaGATTTTTATTATCCATTAC +
Preference number: 4 (lower is better)
Translates to: SSTDSLLEQQDADREKQSLLLDG*IFIIHY
Trigger: GTAATGGATAATAAAAATCCAACCATCAAGCAGCAG...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTCTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCAAGACTGCTGCTTGATGGTTaGATTTTTATTATCCATTAC +
Preference number: 4 (lower is better)
Translates to: LWAQSCVPLVSKVVGCPRLLLDG*IFIIHY
Trigger: GTAATGGATAATAAAAATCCAACCATCAAGCAGCAG...TCTTGGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CCA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGTAGAAGCAGTGCAGTaGCGGAAACTTCTTGCAATA +
Preference number: 4 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRVEAVQ*RKLLAI
Trigger: TATTGCAAGAAGTTTCCGCCACTGCACTGCTTCTAC...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCTTGGAAATTCCTCTaGTTGGAGCAGGTGGACTTT +
Preference number: 4 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRAAWKFL*LEQVDF
Trigger: AAAGTCCACCTGCTCCAACCAGAGGAATTTCCAAGC...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAACCCTTCAAGGCAGTTaGAAGTTCACCTATATTCGG +
Preference number: 4 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRTLQGS*KFTYIR
Trigger: CCGAATATAGGTGAACTTCCAACTGCCTTGAAGGGT...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAATGTTGCTTAATATTTaGGCCCATGGCTACTGCCAG +
Preference number: 4 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRMLLNI*AHGYCQ
Trigger: CTGGCAGTAGCCATGGGCCCAAATATTAAGCAACAT...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCATGGAGCAGGCTTGGCTaGCATGTTAACTTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRAWSRLG*HVNFGF
Trigger: AAAGCCAAAGTTAACATGCCAGCCAAGCCTGCTCCA...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGTGGGTTCTGTACTGCTaGAAATACAATCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAEWVLYC*KYNLQQ
Trigger: CTGCTGAAGATTGTATTTCCAGCAGTACAGAACCCA...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGTTTTTGGATCAGGTTTaGGTTCTGTACTGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTFLDQV*VLYCWK
Trigger: TTTCCAGCAGTACAGAACCCAAACCTGATCCAAAAA...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCACGAATGACATCCTTTaGTTCTCCAACCTTGACGAC +
Preference number: 4 (lower is better)
Translates to: DADREKQSMYKYLCHNDSTNDIL*FSNLDD
Trigger: GTCGTCAAGGTTGGAGAACCAAAGGATGTCATTCGT...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGACGAATGACATCCTTTaGTTCTCCAACCTTGACGAC +
Preference number: 4 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLETNDIL*FSNLDD
Trigger: GTCGTCAAGGTTGGAGAACCAAAGGATGTCATTCGT...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGACATCCGGTTCAGGATaGCACGAACATCTTTACGAA +
Preference number: 4 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLETSGSG*HEHLYE
Trigger: TTCGTAAAGATGTTCGTGCCATCCTGAACCGGATGT...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAAAACATCTTGCTAGCTaGGTAGACAAGGCACATCCG +
Preference number: 4 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRAKHLAS*VDKAHP
Trigger: CGGATGTGCCTTGTCTACCCAGCTAGCAAGATGTTT...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGTTCCACCTGTTTTATTaGTGCAGCAGAGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLEFHLFY*CSRGSL
Trigger: AAGAGACCCTCTGCTGCACCAATAAAACAGGTGGAA...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGTAACATGTTGGCATTaGAGCTTATGTTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAEVTCWH*SLCSVH
Trigger: GTGCACAGAACATAAGCTCCAATGCCAACATGTTAC...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAACCTTGCGTAACATGTTaGCATTGGAGCTTATGTTCT +
Preference number: 4 (lower is better)
Translates to: DSLLEQQDADREKQSMYKPCVTC*HWSLCS
Trigger: AGAACATAAGCTCCAATGCCAACATGTTACGCAAGG...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACTCATCTAGATCCAGCTaGAATTCTCGGCGGACCATC +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDSSRSS*NSRRTI
Trigger: GATGGTCCGCCGAGAATTCCAGCTGGATCTAGATGA...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGTGCTGAACAAGTTCTaGCATTTCACATCGGACTGT +
Preference number: 4 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRVLNKF*HFTSDC
Trigger: ACAGTCCGATGTGAAATGCCAGAACTTGTTCAGCAC...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCATGTCATCGAAGTGTaGAGAAACAGCCCGGATCTT +
Preference number: 4 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQHVIEV*RNSPDL
Trigger: AAGATCCGGGCTGTTTCTCCACACTTCGATGACATG...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGGGCACTCAGGATGTTaGTCTGGTCTGACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TYNQFVYTRPAEAILNYEGHSGC*SGLTSP
Trigger: TGGAGAAGTCAGACCAGACCAACATCCTGAGTGCCC...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGACAAGCTCTGAGAATTTaGGAGAACTGGCTGTTGCTA +
Preference number: 4 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRQALRI*ENWLLL
Trigger: TAGCAACAGCCAGTTCTCCCAAATTCTCAGAGCTTG...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCGGTGGTCCAGGATCTTaGGCCCTTTTAATTTGCATA +
Preference number: 4 (lower is better)
Translates to: DADREKQSMYKYLCHNDSGGPGS*ALLICI
Trigger: TATGCAAATTAAAAGGGCCCAAGATCCTGGACCACC...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACGACTTGCTCCCAGTCTaGTCCATACTGTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDDLLPV*SILCFI
Trigger: GATGAAGCACAGTATGGACCAGACTGGGAGCAAGTC...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCCATTTGTGTTACCTATaGAGGACACTGTGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: DADREKQSMYKYLCHNDSHLCYL*RTLCLW
Trigger: CCACAAGCACAGTGTCCTCCATAGGTAACACAAATG...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
3UTR CAA 72 bp TTTGGAGAGCAAAGAGGTCAAAGGAGGTCGGTCATCTaGCTATTGAGAGAAGGAGAGAGATTGTCTAAGGTC +
Preference number: 4 (lower is better)
Translates to: FGEQRGQRRSVI*LLREGERLSKV
Trigger: GACCTTAGACAATCTCTCTCCTTCTCTCAATAGCAAGATGACCGACCTCCTTTGACCTCTTTGCTCTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS-3UTR TCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGTCTAATCCTTTCAATTaGACCACTGCATTGGAATCA +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTSNPFN*TTALES
Trigger: TGATTCCAATGCAGTGGTTCAATTGAAAGGATTAGA...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGCTTTAGCTTTAGGTTaGTTGAACACCTTACTTACA +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTALALG*LNTLLT
Trigger: TGTAAGTAAGGTGTTCAATCAACCTAAAGCTAAAGC...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGGCTTTAGCTTTAGGTTaGTTGAACACCTTACTTACA +
Preference number: 4 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRALALG*LNTLLT
Trigger: TGTAAGTAAGGTGTTCAATCAACCTAAAGCTAAAGC...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAACTATACAGGCCACTATaGTCTTGGGATTCTTATTGT +
Preference number: 4 (lower is better)
Translates to: DSLLEQQDADREKQSMYKLYRPL*SWDSYC
Trigger: ACAATAAGAATCCCAAGATCATAGTGGCCTGTATAG...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCAGGGCTTGTACCACTTaGGGTTTCTTCTCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: DADREKQSMYKYLCHNDSRACTT*GFFSLN
Trigger: ATTCAAAGAGAAGAAACCTCAAGTGGTACAAGCCCT...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAAGGGGGAAGAACAGCTaGAGCTTTTTCTTCACATAC +
Preference number: 4 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRARGKNS*SFFFTY
Trigger: GTATGTGAAGAAAAAGCTTCAGCTGTTCTTCCCCCT...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGAGGGGGAAGAACAGCTaGAGCTTTTTCTTCACATAC +
Preference number: 4 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQRGKNS*SFFFTY
Trigger: GTATGTGAAGAAAAAGCTTCAGCTGTTCTTCCCCCT...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAAGCATGGCCAATACCTaGTCTTTAGAAGTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRSMANT*SLEVGF
Trigger: AAAGCCAACTTCTAAAGATCAGGTATTGGCCATGCT...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAAATGATGCTGAAAGTCTaGGTGAAACATCTCATCTTG +
Preference number: 4 (lower is better)
Translates to: DSLLEQQDADREKQSMYKMMLKV*VKHLIL
Trigger: CAAGATGAGATGTTTCACTCAGACTTTCAGCATCAT...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCGACAAGATAGGGGATaGAGGAAGATGCTTCATTCT +
Preference number: 4 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQRQDRG*RKMLHS
Trigger: AGAATGAAGCATCTTCCTTCATCCCCTATCTTGTCG...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp GAACACAAATCTAGTTGTAGTGTGAGAACCACTGAAGCCCAGCCAATCTCTGGGGAACATCTTTACGAATaGCATCCTTTGGTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: EHKSSCSVRTTEAQPISGEHLYE*HPLVLQ
Trigger: TTGGAGAACCAAAGGATGTCATTCGTAAAGATGTTC...CCCAGAGATTGGCTGGGCTTCAGTGGTTCTCACACTACAACTAGATTTGTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR TCA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCATCAGTTTGAACACCTaGTCCCCATGTACATTGTAC +
Preference number: 4 (lower is better)
Translates to: DADREKQSMYKYLCHNDSISLNT*SPCTLY
Trigger: GTACAATGTACATGGGGATCAGGTGTTCAAACTGAT...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGATCAGTTTGAACACCTaGTCCCCATGTACATTGTAC +
Preference number: 4 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLEISLNT*SPCTLY
Trigger: GTACAATGTACATGGGGATCAGGTGTTCAAACTGAT...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGATTTCCAATCAGTTTaGACACCTGATCCCCATGTA +
Preference number: 4 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRDFQSV*TPDPHV
Trigger: TACATGGGGATCAGGTGTTCAAACTGATTGGAAATC...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGATGTTGGTCTGGTCTaGCTTCTCCAGAACCTTCAC +
Preference number: 4 (lower is better)
Translates to: TYNQFVYTRPAEAILNYEDVGLV*LLQNLH
Trigger: GTGAAGGTTCTGGAGAAGTCAGACCAGACCAACATC...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCTTCATAACAAGCTCTaGGAATTTGGGAGAACTGGC +
Preference number: 4 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQLHNKL*EFGRTG
Trigger: GCCAGTTCTCCCAAATTCTCAGAGCTTGTTATGAAG...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCTGGGGAAGACCTTCATaGAAATGTGGATATCCAGAA +
Preference number: 4 (lower is better)
Translates to: DADREKQSMYKYLCHNDSWGRPS*KCGYPE
Trigger: TTCTGGATATCCACATTTTCATGAAGGTCTTCCCCA...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGATCCTGTGGTTTTTCCTaGTACATGGGCATTTTCAAC +
Preference number: 4 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRSCGFS*YMGIFN
Trigger: GTTGAAAATGCCCATGTAGCAGGAAAAACCACAGGA...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGAAAAGAGATGTCTGCTaGTTGATGGTTGGATTTTTA +
Preference number: 4 (lower is better)
Translates to: LNSSTDSLLEQQDADREKKRDVC*LMVGFL
Trigger: TAAAAATCCAACCATCAAGCAGCAGACATCTCTTTT...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGTGGCGGAAACTTCTTaGAATAAAAAGAGATGTCTG +
Preference number: 4 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAEVAETS*NKKRCL
Trigger: CAGACATCTCTTTTTATTGCAAGAAGTTTCCGCCAC...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGCACAGCTGGGTTTGTTaGAGCAAGAGCTGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: TYNQFVYTRPAEAILNYEHSWVC*SKSCLH
Trigger: GTGAAGACAGCTCTTGCTGCAACAAACCCAGCTGTG...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACGTTTGGGTTCTGTACTaGTGGAAATACAATCTTCAG +
Preference number: 4 (lower is better)
Translates to: AFIQNTVTLQGDREELTNVWVLY*WKYNLQ
Trigger: CTGAAGATTGTATTTCCAGCAGTACAGAACCCAAAC...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAAGTTTGGGTTCTGTACTaGTGGAAATACAATCTTCAG +
Preference number: 4 (lower is better)
Translates to: DSLLEQQDADREKQSMYKVWVLY*WKYNLQ
Trigger: CTGAAGATTGTATTTCCAGCAGTACAGAACCCAAAC...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGTACAATGGTGTTGAGTaGAGCATTGCGTACAGCATT +
Preference number: 4 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLEYNGVE*SIAYSI
Trigger: AATGCTGTACGCAATGCTGCACTCAACACCATTGTA...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACCACCTGTTTTATTGGTaGAGCAGAGGGTCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDHLFYW*SRGSLC
Trigger: GCAAAGAGACCCTCTGCTGCACCAATAAAACAGGTG...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACGGAGCTTATGTTCTGTaGACGCTGAGGTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDGAYVL*TLRFLF
Trigger: GAAGAGAAACCTCAGCGTGCACAGAACATAAGCTCC...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGTCTGGTCCATACTGTaGTTCATCATCCGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: TYNQFVYTRPAEAILNYEVWSIL*FIIRQR
Trigger: TCTCTGCCGGATGATGAAGCACAGTATGGACCAGAC...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCATTTCCTTATCAGACTTaGTCCCAGTCTGGTCCATAC +
Preference number: 4 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRAFPYQT*SQSGPY
Trigger: GTATGGACCAGACTGGGAGCAAGTCTGATAAGGAAA...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACTGGAAATACGACCTTTaGCCTCCCTCTCCATCTCAA +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDWKYDL*PPSPSQ
Trigger: TTGAGATGGAGAGGGAGGGCAAAGGTCGTATTTCCA...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACCCATCTGAGGGGAGATaGCTGTTGAAGTGGAAATAC +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDPSEGR*LLKWKY
Trigger: GTATTTCCACTTCAACAGGCATCTCCCCTCAGATGG...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGAGCTTCATTTGCGACTaGTCTTTATTCTCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLESFICD*SLFSPV
Trigger: GACTGGAGAGAATAAAGAGCAGTCGCAAATGAAGCT...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCAGGATGAGATTTTTCTaGTCCCTAGGAGCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: DADREKQSMYKYLCHNDSRMRFF*SLGAVC
Trigger: ACAAACAGCTCCTAGGGAGCAGAAAAATCTCATCCT...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGTCAATCCTAAAAATTTaGACCACTCTGGGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTSILKI*TTLGSF
Trigger: AAAAGAGCCCAGAGTGGTCCAAATTTTTAGGATTGA...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGACACAACTTCTCCTGTaGTTTTTCCTGCTACATGGG +
Preference number: 4 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQTQLLL*FFLLHG
Trigger: CCCATGTAGCAGGAAAAACCACAGGAGAAGTTGTGT...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGAGTCTTTGGGAAGTTTaGAAAGGATTTCTACAGCTT +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTSLWEV*KGFLQL
Trigger: AAGCTGTAGAAATCCTTTCCAAACTTCCCAAAGACT...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACATCCTCACTAATGCCTaGCATGGCATTTCAGTTCGG +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDILTNA*HGISVR
Trigger: CCGAACTGAAATGCCATGCCAGGCATTAGTGAGGAT...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGTCCATCCAGGTTTCTTaGCTAGCATCCTCACTAATG +
Preference number: 4 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQSIQVS*LASSLM
Trigger: CATTAGTGAGGATGCTAGCCAAGAAACCTGGATGGA...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGTCTGGTTGGAGCAGGTaGACTTTGTCCCTGCATCTT +
Preference number: 4 (lower is better)
Translates to: TYNQFVYTRPAEAILNYESGWSR*TLSLHL
Trigger: AAGATGCAGGGACAAAGTCCACCTGCTCCAACCAGA...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACGCTTGGAAATTCCTCTaGTTGGAGCAGGTGGACTTT +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDAWKFL*LEQVDF
Trigger: AAAGTCCACCTGCTCCAACCAGAGGAATTTCCAAGC...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGACCCTTCAAGGCAGTTaGAAGTTCACCTATATTCGG +
Preference number: 4 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQTLQGS*KFTYIR
Trigger: CCGAATATAGGTGAACTTCCAACTGCCTTGAAGGGT...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACAAGGAAGGATGAGATTTTTCTGCTCCCTAGGAGCTGTTTGTGGAGAGCAGGGAATGTATTCATCCCGTaGGGTAGTAAAATTCCACTT +
Preference number: 4 (lower is better)
Translates to: TRKDEIFLLPRSCLWRAGNVFIP*GSKIPL
Trigger: AAGTGGAATTTTACTACCCCACGGGATGAATACATT...CCCTGCTCTCCACAAACAGCTCCTAGGGAGCAGAAAAATCTCATCCTTCCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACAAACATCTTGCTAGCTaGGTAGACAAGGCACATCCG +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDKHLAS*VDKAHP
Trigger: CGGATGTGCCTTGTCTACCCAGCTAGCAAGATGTTT...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCGTAACATGTTGGCATTaGAGCTTATGTTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: DADREKQSMYKYLCHNDSVTCWH*SLCSVH
Trigger: GTGCACAGAACATAAGCTCCAATGCCAACATGTTAC...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCCTTGCGTAACATGTTaGCATTGGAGCTTATGTTCT +
Preference number: 4 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLEPCVTC*HWSLCS
Trigger: AGAACATAAGCTCCAATGCCAACATGTTACGCAAGG...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACTTCAGGAATAAGGACTaGCTCAAAAATGTCATCCAG +
Preference number: 4 (lower is better)
Translates to: AFIQNTVTLQGDREELTNFRNKD*LKNVIQ
Trigger: CTGGATGACATTTTTGAGCCAGTCCTTATTCCTGAA...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGTTCAGGAATAAGGACTaGCTCAAAAATGTCATCCAG +
Preference number: 4 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAEFRNKD*LKNVIQ
Trigger: CTGGATGACATTTTTGAGCCAGTCCTTATTCCTGAA...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGTCTTTAGGGTCCTTATaGGAAATTCACTTTTGCATT +
Preference number: 4 (lower is better)
Translates to: LNSSTDSLLEQQDADREKSLGSL*EIHFCI
Trigger: AATGCAAAAGTGAATTTCCCATAAGGACCCTAAAGA...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACCAACACTCCATGATATaGAGCATCTTGGGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDQHSMI*SILGVR
Trigger: CCTGACTCCCAAGATGCTCCATATCATGGAGTGTTG...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR TCA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACGAGATGTCTGCTGCTTaGTGGTTGGATTTTTATTAT +
Preference number: 4 (lower is better)
Translates to: AFIQNTVTLQGDREELTNEMSAA*WLDFYY
Trigger: ATAATAAAAATCCAACCATCAAGCAGCAGACATCTC...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGACCATCTAATACAACCTaGGCTGACGTTTTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRPSNTT*ADVLEK
Trigger: TTTTTCCAAAACGTCAGCTCAGGTTGTATTAGATGG...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCATGATGCTGAAAGTCTaGGTGAAACATCTCATCTTG +
Preference number: 4 (lower is better)
Translates to: DADREKQSMYKYLCHNDSMMLKV*VKHLIL
Trigger: CAAGATGAGATGTTTCACTCAGACTTTCAGCATCAT...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCGAACATCTTTACGAATaGCATCCTTTGGTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: DADREKQSMYKYLCHNDSEHLYE*HPLVLQ
Trigger: TTGGAGAACCAAAGGATGTCATTCGTAAAGATGTTC...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGGATTTCCAATCAGTTTaGACACCTGATCCCCATGTA +
Preference number: 4 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQDFQSV*TPDPHV
Trigger: TACATGGGGATCAGGTGTTCAAACTGATTGGAAATC...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACCTTGGATACTTGTGTTaGTGTCACCACTGGCTACTT +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDLGYLC*CHHWLL
Trigger: AAGTAGCCAGTGGTGACATCAACACAAGTATCCAAG...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGAATCTAGTTGTAGTGTaGGAACCACTGAAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: TYNQFVYTRPAEAILNYENLVVV*EPLKPS
Trigger: GCTGGGCTTCAGTGGTTCTCACACTACAACTAGATT...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR GCA 90 bp ACAAGGAAGGATGAGATTTTTCTGCTCCCTAGGAGCTGTTTGTGGAGAGCAGGGTTTCAATTGAACCACTaGATTGGAATCAGTGACAAA +
Preference number: 4 (lower is better)
Translates to: TRKDEIFLLPRSCLWRAGFQLNH*IGISDK
Trigger: TTTGTCACTGATTCCAATGCAGTGGTTCAATTGAAA...CCCTGCTCTCCACAAACAGCTCCTAGGGAGCAGAAAAATCTCATCCTTCCTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR GCA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAATGGCACAACATGTCCTaGATATTGTCCAAATTTCTT +
Preference number: 4 (lower is better)
Translates to: DSLLEQQDADREKQSMYKWHNMS*ILSKFL
Trigger: AAGAAATTTGGACAATATGCAGGACATGTTGTGCCA...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGAAAAGAGATGTCTGCTaGTTGATGGTTGGATTTTTA +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTKRDVC*LMVGFL
Trigger: TAAAAATCCAACCATCAAGCAGCAGACATCTCTTTT...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp AATGAACACAAATCTAGTTGTAGTGTGAGAACCACTGAAGCCCAGCCAATCTCTCAAAGCAGTACCCAATaGTTCAAATGCGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: NEHKSSCSVRTTEAQPISQSSTQ*FKCGIS
Trigger: AGAGATGCCGCATTTGAAGCATTGGGTACTGCTTTG...AGAGATTGGCTGGGCTTCAGTGGTTCTCACACTACAACTAGATTTGTGTTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR GCA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACTGTCATAGCTTCTTTTaGATTGTTCCCACATTTCAC +
Preference number: 4 (lower is better)
Translates to: AFIQNTVTLQGDREELTNCHSFF*IVPTFH
Trigger: GTGAAATGTGGGAACAATGCAAAAGAAGCTATGACA...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp AATGAACACAAATCTAGTTGTAGTGTGAGAACCACTGAAGCCCAGCCAATCTCTACAGGCTTCGGCTATTaGTGTCATAGCTTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: NEHKSSCSVRTTEAQPISTGFGY*CHSFFC
Trigger: GCAAAAGAAGCTATGACAGCAATAGCCGAAGCCTGT...AGAGATTGGCTGGGCTTCAGTGGTTCTCACACTACAACTAGATTTGTGTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR GCA 90 bp AATGAACACAAATCTAGTTGTAGTGTGAGAACCACTGAAGCCCAGCCAATCTCTGGTGGACTTTGTCCCTaGATCTTCTCAAATTCTGCA +
Preference number: 4 (lower is better)
Translates to: NEHKSSCSVRTTEAQPISGGLCP*IFSNSA
Trigger: TGCAGAATTTGAGAAGATGCAGGGACAAAGTCCACC...AGAGATTGGCTGGGCTTCAGTGGTTCTCACACTACAACTAGATTTGTGTTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR GCA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCATCTGTACCACTTGTaGTATGCTTGGAAATTCCTC +
Preference number: 4 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQHLYHL*YAWKFL
Trigger: GAGGAATTTCCAAGCATAGCACAAGTGGTACAGATG...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCGGTTGGATAAATTTTaGGTCATTAATAATACCTGC +
Preference number: 4 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRRLDKF*VINNTC
Trigger: GCAGGTATTATTAATGACGCAAAATTTATCCAACCG...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGAGGCACTCTGCTCTCTaGTTAGAGTTTTTGGATTTG +
Preference number: 4 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQRHSAL*LEFLDL
Trigger: CAAATCCAAAAACTCTAAGCAGAGAGCAGAGTGCCT...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACGTTGGCAAACATTCATaGCATAGGACTCAACCAGAC +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDVGKHS*HRTQPD
Trigger: GTCTGGTTGAGTCCTATGGCATGAATGTTTGCCAAC...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGGATGCTGTATTACTGTaGATGTCATCGAAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQDAVLL*MSSKCG
Trigger: TCCACACTTCGATGACATGCACAGTAATACAGCATC...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACGAAATTGATTGTGGATaGTGTATTACTGTGCATGTC +
Preference number: 4 (lower is better)
Translates to: AFIQNTVTLQGDREELTNEIDCG*CITVHV
Trigger: GACATGCACAGTAATACAGCATCCACAATCAATTTC...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACTGGGCCCTTTTAATTTaGATAAGGTGTGTAGCAGGG +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDWALLI*IRCVAG
Trigger: CCCTGCTACACACCTTATGCAAATTAAAAGGGCCCA...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAATTCATCTATTCGAGATaGTCCCTTTTCTGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: DSLLEQQDADREKQSMYKFIYSR*SLFCFL
Trigger: AAGGAAACAGAAAAGGGAGCATCTCGAATAGATGAA...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACATGTACAAATACTTGTaGCACAATGACTCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDMYKYL*HNDSSP
Trigger: GGGGGAGGAGTCATTGTGGCACAAGTATTTGTACAT...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGAGTTGTATCATGCCATaGATTCATACAGAATACAGT +
Preference number: 4 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRSCIMP*IHTEYS
Trigger: ACTGTATTCTGTATGAATGCATGGCATGATACAACT...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACAAATTTGGACCACTCTaGGCTCTTTTCATCCTTTAT +
Preference number: 4 (lower is better)
Translates to: AFIQNTVTLQGDREELTNKFGPL*ALFILY
Trigger: ATAAAGGATGAAAAGAGCCCAGAGTGGTCCAAATTT...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACTCAATCCTAAAAATTTaGACCACTCTGGGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: AFIQNTVTLQGDREELTNSILKI*TTLGSF
Trigger: AAAAGAGCCCAGAGTGGTCCAAATTTTTAGGATTGA...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGAGACTCAAAGAGTTTTaGCAACACTTTGATAATTGG +
Preference number: 4 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTRLKEF*QHFDNW
Trigger: CCAATTATCAAAGTGTTGCCAAAACTCTTTGAGTCT...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGGCTTCTAGTTCTTGTTaGGAACGAAGAAATCGAGTA +
Preference number: 4 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLEASSSC*ERRNRV
Trigger: TACTCGATTTCTTCGTTCCCAACAAGAACTAGAAGC...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGATCCTCACTAATGCCTaGCATGGCATTTCAGTTCGG +
Preference number: 4 (lower is better)
Translates to: TYNQFVYTRPAEAILNYEILTNA*HGISVR
Trigger: CCGAACTGAAATGCCATGCCAGGCATTAGTGAGGAT...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACTCCATCCAGGTTTCTTaGCTAGCATCCTCACTAATG +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDSIQVS*LASSLM
Trigger: CATTAGTGAGGATGCTAGCCAAGAAACCTGGATGGA...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGGAAAAATTTCCCTTCTaGGCAATCAAAGCAACTATA +
Preference number: 4 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTREKFPF*AIKATI
Trigger: TATAGTTGCTTTGATTGCCCAGAAGGGAAATTTTTC...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCTTTTTGGATCAGGTTTaGGTTCTGTACTGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: DADREKQSMYKYLCHNDSFLDQV*VLYCWK
Trigger: TTTCCAGCAGTACAGAACCCAAACCTGATCCAAAAA...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCCTTGCGTAACATGTTaGCATTGGAGCTTATGTTCT +
Preference number: 4 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQPCVTC*HWSLCS
Trigger: AGAACATAAGCTCCAATGCCAACATGTTACGCAAGG...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACGTGCTGAACAAGTTCTaGCATTTCACATCGGACTGT +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDVLNKF*HFTSDC
Trigger: ACAGTCCGATGTGAAATGCCAGAACTTGTTCAGCAC...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GAACACAAATCTAGTTGTAGTGTGAGAACCACTGAAGCCCAGCCAATCTCTGGGTCACCACTGGCTACTTaGGAGATAATGAAATTGATT +
Preference number: 4 (lower is better)
Translates to: EHKSSCSVRTTEAQPISGSPLAT*EIMKLI
Trigger: AATCAATTTCATTATCTCCCAAGTAGCCAGTGGTGA...CCCAGAGATTGGCTGGGCTTCAGTGGTTCTCACACTACAACTAGATTTGTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACAGATGCCTGTTGAAGTaGAAATACGACCTTTGCCCT +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDRCLLK*KYDLCP
Trigger: AGGGCAAAGGTCGTATTTCCACTTCAACAGGCATCT...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACAGTAGGAACTGCTaGTTTGGAGAGCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: TYNQFVYTRPAEAILNYEDSRNC*FGEQRG
Trigger: ACCTCTTTGCTCTCCAAACCAGCAGTTCCTACTGTC...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAACGACTGGTGATAATTaGAGGGAAATCATGACCAAA +
Preference number: 4 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRTTGDN*REIMTK
Trigger: TTTGGTCATGATTTCCCTCCAATTATCACCAGTCGT...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR TCA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGTTGTGTTCACATTTCTaGTCAACTGGCAGTTTCAAC +
Preference number: 4 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQLCSHF*STGSFN
Trigger: GTTGAAACTGCCAGTTGATCAGAAATGTGAACACAA...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCACTATACAGGCCACTATaGTCTTGGGATTCTTATTGT +
Preference number: 4 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRALYRPL*SWDSYC
Trigger: ACAATAAGAATCCCAAGATCATAGTGGCCTGTATAG...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGTTTTATTTGAATCATTaGGTCGACCCTTCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQFYLNH*VDPSRQ
Trigger: CTGCCTTGAAGGGTCGACTCAATGATTCAAATAAAA...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp AATGAACACAAATCTAGTTGTAGTGTGAGAACCACTGAAGCCCAGCCAATCTCTAGCATGGCCAATACCTaGTCTTTAGAAGTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: NEHKSSCSVRTTEAQPISSMANT*SLEVGF
Trigger: AAAGCCAACTTCTAAAGATCAGGTATTGGCCATGCT...AGAGATTGGCTGGGCTTCAGTGGTTCTCACACTACAACTAGATTTGTGTTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR TCA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGCTTCATAACAAGCTCTaGGAATTTGGGAGAACTGGC +
Preference number: 4 (lower is better)
Translates to: TYNQFVYTRPAEAILNYELHNKL*EFGRTG
Trigger: GCCAGTTCTCCCAAATTCTCAGAGCTTGTTATGAAG...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACTGTCATCTCCCATTGTaGTTCCAGGTTTTCCTTAGA +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDCHLPL*FQVFLR
Trigger: TCTAAGGAAAACCTGGAAGCACAATGGGAGATGACA...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGTGGCACAACATGTCCTaGATATTGTCCAAATTTCTT +
Preference number: 4 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLEWHNMS*ILSKFL
Trigger: AAGAAATTTGGACAATATGCAGGACATGTTGTGCCA...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAAATAAAAAGAGATGTCTaGTGCTTGATGGTTGGATTT +
Preference number: 4 (lower is better)
Translates to: DSLLEQQDADREKQSMYKIKRDV*CLMVGF
Trigger: AAATCCAACCATCAAGCAGCAGACATCTCTTTTTAT...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GAACACAAATCTAGTTGTAGTGTGAGAACCACTGAAGCCCAGCCAATCTCTGGGATAAAAAGAGATGTCTaGTGCTTGATGGTTGGATTT +
Preference number: 4 (lower is better)
Translates to: EHKSSCSVRTTEAQPISGIKRDV*CLMVGF
Trigger: AAATCCAACCATCAAGCAGCAGACATCTCTTTTTAT...CCCAGAGATTGGCTGGGCTTCAGTGGTTCTCACACTACAACTAGATTTGTGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR GCA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCTGTCATAGCTTCTTTTaGATTGTTCCCACATTTCAC +
Preference number: 4 (lower is better)
Translates to: DADREKQSMYKYLCHNDSCHSFF*IVPTFH
Trigger: GTGAAATGTGGGAACAATGCAAAAGAAGCTATGACA...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACGTACCACTTGTGCTATaGTTGGAAATTCCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDVPLVL*LEIPLV
Trigger: AACCAGAGGAATTTCCAAGCATAGCACAAGTGGTAC...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACCATCTGTACCACTTGTaGTATGCTTGGAAATTCCTC +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDHLYHL*YAWKFL
Trigger: GAGGAATTTCCAAGCATAGCACAAGTGGTACAGATG...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACAGGCACTCTGCTCTCTaGTTAGAGTTTTTGGATTTG +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDRHSAL*LEFLDL
Trigger: CAAATCCAAAAACTCTAAGCAGAGAGCAGAGTGCCT...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACTCCTCTCCTCGAGCATaGTCATATCCTTTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDSSPRA*SYPFQK
Trigger: TTTCTGAAAAGGATATGAGCATGCTCGAGGAGAGGA...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp TTTGGAGAGCAAAGAGGTCAAAGGAGGTCGGTCATCTTGCTATTGAGAGAAGGATTCATCTATTCGAGATaGTCCCTTTTCTGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: FGEQRGQRRSVILLLREGFIYSR*SLFCFL
Trigger: AAGGAAACAGAAAAGGGAGCATCTCGAATAGATGAA...TCCTTCTCTCAATAGCAAGATGACCGACCTCCTTTGACCTCTTTGCTCTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS-3UTR GCA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGTGGGGCAGCTTCATTTaGGACTGCTCTTTATTCTCT +
Preference number: 4 (lower is better)
Translates to: TYNQFVYTRPAEAILNYEWGSFI*DCSLFS
Trigger: AGAGAATAAAGAGCAGTCGCAAATGAAGCTGCCCCA...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACAGTTGTATCATGCCATaGATTCATACAGAATACAGT +
Preference number: 4 (lower is better)
Translates to: AFIQNTVTLQGDREELTNSCIMP*IHTEYS
Trigger: ACTGTATTCTGTATGAATGCATGGCATGATACAACT...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGAGACTCAAAGAGTTTTaGCAACACTTTGATAATTGG +
Preference number: 4 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAERLKEF*QHFDNW
Trigger: CCAATTATCAAAGTGTTGCCAAAACTCTTTGAGTCT...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACAGACTCAAAGAGTTTTaGCAACACTTTGATAATTGG +
Preference number: 4 (lower is better)
Translates to: AFIQNTVTLQGDREELTNRLKEF*QHFDNW
Trigger: CCAATTATCAAAGTGTTGCCAAAACTCTTTGAGTCT...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGGCTTCTAGTTCTTGTTaGGAACGAAGAAATCGAGTA +
Preference number: 4 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQASSSC*ERRNRV
Trigger: TACTCGATTTCTTCGTTCCCAACAAGAACTAGAAGC...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCAGTCTTTGGGAAGTTTaGAAAGGATTTCTACAGCTT +
Preference number: 4 (lower is better)
Translates to: DADREKQSMYKYLCHNDSSLWEV*KGFLQL
Trigger: AAGCTGTAGAAATCCTTTCCAAACTTCCCAAAGACT...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACTGGGTTCTGTACTGCTaGAAATACAATCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDWVLYC*KYNLQQ
Trigger: CTGCTGAAGATTGTATTTCCAGCAGTACAGAACCCA...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGTCACCACTGGCTACTTaGGAGATAATGAAATTGATT +
Preference number: 4 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLESPLAT*EIMKLI
Trigger: AATCAATTTCATTATCTCCCAAGTAGCCAGTGGTGA...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAATCTTTAGGGTCCTTATaGGAAATTCACTTTTGCATT +
Preference number: 4 (lower is better)
Translates to: DSLLEQQDADREKQSMYKSLGSL*EIHFCI
Trigger: AATGCAAAAGTGAATTTCCCATAAGGACCCTAAAGA...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACTTGTGTTCACATTTCTaGTCAACTGGCAGTTTCAAC +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDLCSHF*STGSFN
Trigger: GTTGAAACTGCCAGTTGATCAGAAATGTGAACACAA...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGCACTTGTTGGCAGTTTaGCCCATTCTTCTTCTAGTT +
Preference number: 4 (lower is better)
Translates to: TYNQFVYTRPAEAILNYEHLLAV*PILLLV
Trigger: AACTAGAAGAAGAATGGGTCAAACTGCCAACAAGTG...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGAGCATGGCCAATACCTaGTCTTTAGAAGTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: TYNQFVYTRPAEAILNYESMANT*SLEVGF
Trigger: AAAGCCAACTTCTAAAGATCAGGTATTGGCCATGCT...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGTGGGGAAGACCTTCATaGAAATGTGGATATCCAGAA +
Preference number: 4 (lower is better)
Translates to: TYNQFVYTRPAEAILNYEWGRPS*KCGYPE
Trigger: TTCTGGATATCCACATTTTCATGAAGGTCTTCCCCA...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGTTTCAATTGAACCACTaGATTGGAATCAGTGACAAA +
Preference number: 4 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLEFQLNH*IGISDK
Trigger: TTTGTCACTGATTCCAATGCAGTGGTTCAATTGAAA...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGAGTAAGACATTTTGCTaGCAAAGCCACCAACATGAC +
Preference number: 4 (lower is better)
Translates to: TYNQFVYTRPAEAILNYESKTFC*QSHQHD
Trigger: GTCATGTTGGTGGCTTTGGCAGCAAAATGTCTTACT...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCATGGCACAACATGTCCTaGATATTGTCCAAATTTCTT +
Preference number: 4 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRAWHNMS*ILSKFL
Trigger: AAGAAATTTGGACAATATGCAGGACATGTTGTGCCA...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGATAAAAAGAGATGTCTaGTGCTTGATGGTTGGATTT +
Preference number: 4 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLEIKRDV*CLMVGF
Trigger: AAATCCAACCATCAAGCAGCAGACATCTCTTTTTAT...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACAAGGTGATGAGGCCATaGATTAGGTCTTTTAGTACT +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDKVMRP*IRSFST
Trigger: AGTACTAAAAGACCTAATGCATGGCCTCATCACCTT...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGAGCTTCATTTGCGACTaGTCTTTATTCTCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: TYNQFVYTRPAEAILNYESFICD*SLFSPV
Trigger: GACTGGAGAGAATAAAGAGCAGTCGCAAATGAAGCT...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAAATGTATTCATCCCGTaGGGTAGTAAAATTCCACTT +
Preference number: 4 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRANVFIP*GSKIPL
Trigger: AAGTGGAATTTTACTACCCCACGGGATGAATACATT...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACTCTAATCCTTTCAATTaGACCACTGCATTGGAATCA +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDSNPFN*TTALES
Trigger: TGATTCCAATGCAGTGGTTCAATTGAAAGGATTAGA...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGCTATACAGGCCACTATaGTCTTGGGATTCTTATTGT +
Preference number: 4 (lower is better)
Translates to: TYNQFVYTRPAEAILNYELYRPL*SWDSYC
Trigger: ACAATAAGAATCCCAAGATCATAGTGGCCTGTATAG...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGTTTTATTTGAATCATTaGGTCGACCCTTCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: TYNQFVYTRPAEAILNYEFYLNH*VDPSRQ
Trigger: CTGCCTTGAAGGGTCGACTCAATGATTCAAATAAAA...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp AATGAACACAAATCTAGTTGTAGTGTGAGAACCACTGAAGCCCAGCCAATCTCTATTGGAGGGAAATCATaGCCAAAATCTCAAAACAAG +
Preference number: 4 (lower is better)
Translates to: NEHKSSCSVRTTEAQPISIGGKS*PKSQNK
Trigger: CTTGTTTTGAGATTTTGGTCATGATTTCCCTCCAAT...AGAGATTGGCTGGGCTTCAGTGGTTCTCACACTACAACTAGATTTGTGTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR GCA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCATTTCAATTGAACCACTaGATTGGAATCAGTGACAAA +
Preference number: 4 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRAFQLNH*IGISDK
Trigger: TTTGTCACTGATTCCAATGCAGTGGTTCAATTGAAA...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGAAAAGAGATGTCTGCTaGTTGATGGTTGGATTTTTA +
Preference number: 4 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQKRDVC*LMVGFL
Trigger: TAAAAATCCAACCATCAAGCAGCAGACATCTCTTTT...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCACGGTTGGATAAATTTTaGGTCATTAATAATACCTGC +
Preference number: 4 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRARLDKF*VINNTC
Trigger: GCAGGTATTATTAATGACGCAAAATTTATCCAACCG...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR GCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACGAAATTGATTGTGGATaGTGTATTACTGTGCATGTC +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDEIDCG*CITVHV
Trigger: GACATGCACAGTAATACAGCATCCACAATCAATTTC...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGCTTCTAGTTCTTGTTaGGAACGAAGAAATCGAGTA +
Preference number: 4 (lower is better)
Translates to: TYNQFVYTRPAEAILNYEASSSC*ERRNRV
Trigger: TACTCGATTTCTTCGTTCCCAACAAGAACTAGAAGC...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGAAAAATTTCCCTTCTaGGCAATCAAAGCAACTATA +
Preference number: 4 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRAEKFPF*AIKATI
Trigger: TATAGTTGCTTTGATTGCCCAGAAGGGAAATTTTTC...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR TCA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGAGATGTCTGCTGCTTaGTGGTTGGATTTTTATTAT +
Preference number: 4 (lower is better)
Translates to: TYNQFVYTRPAEAILNYEEMSAA*WLDFYY
Trigger: ATAATAAAAATCCAACCATCAAGCAGCAGACATCTC...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGAAATTTGGACCACTCTaGGCTCTTTTCATCCTTTAT +
Preference number: 4 (lower is better)
Translates to: TYNQFVYTRPAEAILNYEKFGPL*ALFILY
Trigger: ATAAAGGATGAAAAGAGCCCAGAGTGGTCCAAATTT...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACCTGCTGCTTGATGGTTaGATTTTTATTATCCATTAC +
Preference number: 4 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDLLLDG*IFIIHY
Trigger: GTAATGGATAATAAAAATCCAACCATCAAGCAGCAG...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGAATGTATTCATCCCGTaGGGTAGTAAAATTCCACTT +
Preference number: 4 (lower is better)
Translates to: TYNQFVYTRPAEAILNYENVFIP*GSKIPL
Trigger: AAGTGGAATTTTACTACCCCACGGGATGAATACATT...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGTCACCACTGGCTACTTaGGAGATAATGAAATTGATT +
Preference number: 4 (lower is better)
Translates to: TYNQFVYTRPAEAILNYESPLAT*EIMKLI
Trigger: AATCAATTTCATTATCTCCCAAGTAGCCAGTGGTGA...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CCA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGAAAAATTTCCCTTCTaGGCAATCAAAGCAACTATA +
Preference number: 4 (lower is better)
Translates to: TYNQFVYTRPAEAILNYEEKFPF*AIKATI
Trigger: TATAGTTGCTTTGATTGCCCAGAAGGGAAATTTTTC...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS GCA 90 bp ATTGTGCTTCCAGGTTTTCCTCAGCTGGGTCAGAACCAAGCGGCCTaGTCTAAGCCGTTTGAAACCGCTTGGGCCGCCGCACACCCCGCA +
Preference number: 5 (lower is better)
Translates to: IVLPGFPQLGQNQAA*SKPFETAWAAAHPA
Trigger: TGCGGGGTGTGCGGCGGCCCAAGCGGTTTCAAACGGCTTAGAGCAGGCCGCTTGGTTCTGACCCAGCTGAGGAAAACCTGGAAGCACAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525248.1
CDS-3UTR CAA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTCCTGCTCTAAGCCGTTaGAAACCGCTTGGGCCGCCG +
Preference number: 5 (lower is better)
Translates to: SSTDSLLEQQDADREKQSPALSR*KPLGPP
Trigger: CGGCGGCCCAAGCGGTTTCAAACGGCTTAGAGCAGG...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312055.9
ENST00000529230.6
CDS-3UTR CAA 90 bp CTCTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCAAGAGATGCAGGCTGGAATTaGGCTGGAGCGGACCCTCCC +
Preference number: 5 (lower is better)
Translates to: LWAQSCVPLVSKVVGCPRDAGWN*AGADPP
Trigger: GGGAGGGTCCGCTCCAGCCAAATTCCAGCCTGCATC...TCTTGGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS TCA 90 bp GAATCCAGGTCTGAATGCTGGTGCTGCTCCCGTGACTCCCGGAGCTaGGAGAGTTTGCTGTGGAGCATGTCTGTGGAAGAGGCGACAGTA +
Preference number: 5 (lower is better)
Translates to: ESRSECWCCSRDSRS*ESLLWSMSVEEATV
Trigger: TACTGTCGCCTCTTCCACAGACATGCTCCACAGCAAACTCTCTCAGCTCCGGGAGTCACGGGAGCAGCACCAGCATTCAGACCTGGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
ENST00000533413.5
CDS GCA 90 bp AGATCCAGCTGGAATTCTCGGCGGACCATCTGGGCTGCCTCAGGATaGCCACTCATGCTTCGGGCTTGGTTGAGTTTGGAAGACATGTCC +
Preference number: 5 (lower is better)
Translates to: RSSWNSRRTIWAASG*PLMLRAWLSLEDMS
Trigger: GGACATGTCTTCCAAACTCAACCAAGCCCGAAGCATGAGTGGGCATCCTGAGGCAGCCCAGATGGTCCGCCGAGAATTCCAGCTGGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
ENST00000533413.5
CDS TCA 90 bp CTCTGTGGGCCAGCCTGCCTCGGACCTGCTTGTGACTACCCTCCCTaGACTGCACAGAAGAAAAGGAGCAGTACCTTTGTGTTGTCCAGA +
Preference number: 5 (lower is better)
Translates to: LCGPACLGPACDYPP*TAQKKRSSTFVLSR
Trigger: TCTGGACAACACAAAGGTACTGCTCCTTTTCTTCTGTGCAGTTCAGGGAGGGTAGTCACAAGCAGGTCCGAGGCAGGCTGGCCCACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS GCA 90 bp TTAGAATTAAGAGTATTTCCTCAGCTGGGTCAGAACCAAGCGGCCTaGTCTAAGCCGTTTGAAACCGCTTGGGCCGCCGCACACCCCGCA +
Preference number: 5 (lower is better)
Translates to: LELRVFPQLGQNQAA*SKPFETAWAAAHPA
Trigger: TGCGGGGTGTGCGGCGGCCCAAGCGGTTTCAAACGGCTTAGAGCAGGCCGCTTGGTTCTGACCCAGCTGAGGAAATACTCTTAATTCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312055.9
CDS-3UTR CAA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGATGCAGGCTGGAATTaGGCTGGAGCGGACCCTCCC +
Preference number: 5 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTDAGWN*AGADPP
Trigger: GGGAGGGTCCGCTCCAGCCAAATTCCAGCCTGCATC...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS CCA 90 bp TTCTCAATCTCATCTAGATCCAGCTGGAATTCTCGGCGGACCATCTaGGCTGCCTCAGGATGCCCACTCATGCTTCGGGCTTGGTTGAGT +
Preference number: 5 (lower is better)
Translates to: FSISSRSSWNSRRTI*AASGCPLMLRAWLS
Trigger: ACTCAACCAAGCCCGAAGCATGAGTGGGCATCCTGAGGCAGCCCAGATGGTCCGCCGAGAATTCCAGCTGGATCTAGATGAGATTGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
ENST00000533413.5
CDS CCA 90 bp TTCTCAATCTCATCTAGATCCAGCTGGAATTCTCGGCGGACCATCTaGGCTGCCTCAGGATGCCCACTCATGCTTCGGGCTTGGATCCTA +
Preference number: 5 (lower is better)
Translates to: FSISSRSSWNSRRTI*AASGCPLMLRAWIL
Trigger: TAGGATCCAAGCCCGAAGCATGAGTGGGCATCCTGAGGCAGCCCAGATGGTCCGCCGAGAATTCCAGCTGGATCTAGATGAGATTGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526876.2
ENST00000527333.5
CDS-3UTR CAA 90 bp AGAACTACAGCAAGACTAAGCCACTTCTCTGTGGGCCAGCCTGCCTCGGACCTGGAGGGGAGATGCCTGTaGAAGTGGAAATACGACCTT +
Preference number: 5 (lower is better)
Translates to: RTTARLSHFSVGQPASDLEGRCL*KWKYDL
Trigger: AAGGTCGTATTTCCACTTCAACAGGCATCTCCCCTC...CAGGTCCGAGGCAGGCTGGCCCACAGAGAAGTGGCTTAGTCTTGCTGTAGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS-3UTR CAA 90 bp CAGAACTACAGCAAGACTAAGCCACTTCTCTGTGGGCCAGCCTGCCTCGGACCTAGGAGGTCGGTCATCTaGCTATTGAGAGAAGGAGAG +
Preference number: 5 (lower is better)
Translates to: QNYSKTKPLLCGPACLGPRRSVI*LLREGE
Trigger: CTCTCCTTCTCTCAATAGCAAGATGACCGACCTCCT...AGGTCCGAGGCAGGCTGGCCCACAGAGAAGTGGCTTAGTCTTGCTGTAGTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS GCA 90 bp AGGCTGGAATTTGGCTGGAGCGGACCCTCCCATTGGTTTAGAAGTTaGTTTAGTGGGTGGAGCAGGCTTGGCTGGCATGTTAACTTTGGC +
Preference number: 5 (lower is better)
Translates to: RLEFGWSGPSHWFRS*FSGWSRLGWHVNFG
Trigger: GCCAAAGTTAACATGCCAGCCAAGCCTGCTCCACCCACTAAAGCAACTTCTAAACCAATGGGAGGGTCCGCTCCAGCCAAATTCCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000526943.1
ENST00000529230.6
ENST00000533413.5
CDS-3UTR CAA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCCTGCTCTAAGCCGTTaGAAACCGCTTGGGCCGCCG +
Preference number: 5 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLEPALSR*KPLGPP
Trigger: CGGCGGCCCAAGCGGTTTCAAACGGCTTAGAGCAGG...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312055.9
ENST00000529230.6
CDS-3UTR CAA 90 bp CAATCTCTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCTGCCTCCTGCAGGGCTaGTACCACTTGAGGTTTCTT +
Preference number: 5 (lower is better)
Translates to: QSLGAILCAFGQQSGRMPCLLQG*YHLRFL
Trigger: AAGAAACCTCAAGTGGTACAAGCCCTGCAGGAGGCA...GGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAGAGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CAA 90 bp CTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCAAGAGCCCAGCCCAGAAGCTCTaGCCTCAAGAAAGGATTTTC +
Preference number: 5 (lower is better)
Translates to: LGAILCAFGQQSGRMPKSPAQKL*PQERIF
Trigger: GAAAATCCTTTCTTGAGGCAAGAGCTTCTGGGCTGG...GCTCTTGGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CAA 90 bp CTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCAAGAGCAGGCTTTTCCTGGGGTaGGTTGGCAAACATTCATGC +
Preference number: 5 (lower is better)
Translates to: LGAILCAFGQQSGRMPKSRLFLG*VGKHSC
Trigger: GCATGAATGTTTGCCAACCAACCCCAGGAAAAGCCT...GCTCTTGGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CAA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTGTGTTGAGTGCAGCATaGCGTACAGCATTGTCACGG +
Preference number: 5 (lower is better)
Translates to: SSTDSLLEQQDADREKQSVLSAA*RTALSR
Trigger: CCGTGACAATGCTGTACGCAATGCTGCACTCAACAC...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CAGCTCCAGAACTACAGCAAGACTAAGCCACTTCTCTGTGGGCCAGCCTGCCTCGTTTCCTTATCAGACTaGCTCCCAGTCTGGTCCATA +
Preference number: 5 (lower is better)
Translates to: QLQNYSKTKPLLCGPACLVSLSD*LPVWSI
Trigger: TATGGACCAGACTGGGAGCAAGTCTGATAAGGAAAC...GAGGCAGGCTGGCCCACAGAGAAGTGGCTTAGTCTTGCTGTAGTTCTGGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS-3UTR CAA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTGACATGGCTTCAGCTTaGTCTTCCTGTCTCAGGACC +
Preference number: 5 (lower is better)
Translates to: SSTDSLLEQQDADREKQSDMASA*SSCLRT
Trigger: GGTCCTGAGACAGGAAGACAAAGCTGAAGCCATGTC...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS TCA 90 bp TCTATGTTAGCTGTGGAGGAGGAGGAGGTCACAGTTCCTGAAGAGTaGGTCTGGTTAGAATCCAGGTCTGAATGCTGGTGCTGCTCCCGT +
Preference number: 5 (lower is better)
Translates to: SMLAVEEEEVTVPEE*VWLESRSECWCCSR
Trigger: ACGGGAGCAGCACCAGCATTCAGACCTGGATTCTAACCAGACTCACTCTTCAGGAACTGTGACCTCCTCCTCCTCCACAGCTAACATAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
ENST00000533413.5
CDS GCA 90 bp CTTCCATCTGAGGGGAGATGCCTGTTGAAGTGGAAATACGACCTTTaGCCTCCCTCTCCATCTCAATCACCCGAAGGCCTCTTTCGACAT +
Preference number: 5 (lower is better)
Translates to: LPSEGRCLLKWKYDL*PPSPSQSPEGLFRH
Trigger: ATGTCGAAAGAGGCCTTCGGGTGATTGAGATGGAGAGGGAGGGCAAAGGTCGTATTTCCACTTCAACAGGCATCTCCCCTCAGATGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000525896.1
ENST00000529230.6
ENST00000533413.5
CDS CCA 90 bp TTGCTCCCAGTCTGGTCCATACTGTGCTTCATCATCCGGCAGAGATaGGCCTCCAGCTCAGACTCGTTTTTGTTGTCGATCATCGTTAGG +
Preference number: 5 (lower is better)
Translates to: LLPVWSILCFIIRQR*ASSSDSFLLSIIVR
Trigger: CCTAACGATGATCGACAACAAAAACGAGTCTGAGCTGGAGGCCCATCTCTGCCGGATGATGAAGCACAGTATGGACCAGACTGGGAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000525896.1
ENST00000529230.6
ENST00000533413.5
CDS-3UTR CAA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGGCAGCAGCTCGAACATaGTTCTTGCTGTCTCCAAGG +
Preference number: 5 (lower is better)
Translates to: LNSSTDSLLEQQDADREKAAART*FLLSPR
Trigger: CCTTGGAGACAGCAAGAACAATGTTCGAGCTGCTGC...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGGCAGCAGCTCGAACATaGTTCTTGCTGTCTCCAAGG +
Preference number: 5 (lower is better)
Translates to: TLNSSTDSLLEQQDADREAAART*FLLSPR
Trigger: CCTTGGAGACAGCAAGAACAATGTTCGAGCTGCTGC...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTCCAGCCCAGAAGCTCTaGCCTCAAGAAAGGATTTTC +
Preference number: 5 (lower is better)
Translates to: SSTDSLLEQQDADREKQSPAQKL*PQERIF
Trigger: GAAAATCCTTTCTTGAGGCAAGAGCTTCTGGGCTGG...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGGTGGGTGGAGCAGGCTaGGCTGGCATGTTAACTTTG +
Preference number: 5 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRVGGAG*AGMLTL
Trigger: CAAAGTTAACATGCCAGCCAAGCCTGCTCCACCCAC...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGGATGCAGGCTGGAATTaGGCTGGAGCGGACCCTCCC +
Preference number: 5 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQDAGWN*AGADPP
Trigger: GGGAGGGTCCGCTCCAGCCAAATTCCAGCCTGCATC...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGTCCTCAGCTGGTCCCTaGCGTAACATGTTGGCATTG +
Preference number: 5 (lower is better)
Translates to: LNSSTDSLLEQQDADREKSSAGP*RNMLAL
Trigger: CAATGCCAACATGTTACGCAAGGGACCAGCTGAGGA...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGCGGGCTTGGTTGAGTTaGGAAGACATGTCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: TLNSSTDSLLEQQDADRERAWLS*EDMSSA
Trigger: AGCTGAGGACATGTCTTCCAAACTCAACCAAGCCCG...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGCTTCGGGCTTGGTaGAGTTTGGAAGACATGTCC +
Preference number: 5 (lower is better)
Translates to: SSTDSLLEQQDADREKQSMLRAW*SLEDMS
Trigger: GGACATGTCTTCCAAACTCAACCAAGCCCGAAGCAT...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS CCA 90 bp TTTGCTGTGGAGCATGTCTGTGGAAGAGGCGACAGTAGGAACTGCTaGTTTGGAGAGCAAAGAGGTCAAAGGAGGTCGGTCATCTTGCTT +
Preference number: 5 (lower is better)
Translates to: FAVEHVCGRGDSRNC*FGEQRGQRRSVILL
Trigger: AAGCAAGATGACCGACCTCCTTTGACCTCTTTGCTCTCCAAACCAGCAGTTCCTACTGTCGCCTCTTCCACAGACATGCTCCACAGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
ENST00000533413.5
CDS-3UTR CAA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTCACTGTCATCTCCCATaGTGCTTCCAGGTTTTCCTT +
Preference number: 5 (lower is better)
Translates to: SSTDSLLEQQDADREKQSHCHLP*CFQVFL
Trigger: AAGGAAAACCTGGAAGCACAATGGGAGATGACAGTG...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTTTTCAGGAGCTCTTCTaGAACAGCCTCTCCTTTCTC +
Preference number: 5 (lower is better)
Translates to: SSTDSLLEQQDADREKQSFQELF*NSLSFL
Trigger: GAGAAAGGAGAGGCTGTTCAAGAAGAGCTCCTGAAA...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGGCCACCAACATGACATaGGTGTCCTTTCCAACAACC +
Preference number: 5 (lower is better)
Translates to: TLNSSTDSLLEQQDADREATNMT*VSFPTT
Trigger: GGTTGTTGGAAAGGACACCAATGTCATGTTGGTGGC...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTCCACTTGTGCTATGCTaGGAAATTCCTCTGGTTGGA +
Preference number: 5 (lower is better)
Translates to: SSTDSLLEQQDADREKQSPLVLC*EIPLVG
Trigger: TCCAACCAGAGGAATTTCCAAGCATAGCACAAGTGG...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTCTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCAAGACCACTTGTGCTATGCTaGGAAATTCCTCTGGTTGGA +
Preference number: 5 (lower is better)
Translates to: LWAQSCVPLVSKVVGCPRPLVLC*EIPLVG
Trigger: TCCAACCAGAGGAATTTCCAAGCATAGCACAAGTGG...TCTTGGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CAA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGCATGGCTACTGCCAGTaGTTGCAGGATATTCAGCGT +
Preference number: 5 (lower is better)
Translates to: TLNSSTDSLLEQQDADREHGYCQ*LQDIQR
Trigger: ACGCTGAATATCCTGCAACAACTGGCAGTAGCCATG...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGCTTCCACCTGTTTTATaGGTGCAGCAGAGGGTCTCT +
Preference number: 5 (lower is better)
Translates to: TLNSSTDSLLEQQDADRELPPVL*VQQRVS
Trigger: AGAGACCCTCTGCTGCACCAATAAAACAGGTGGAAG...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACAAGGAAGGATGAGATTTTTCTGCTCCCTAGGAGCTGTTTGTGGAGAGCAGGGCGGGCTTGGTTGAGTTaGGAAGACATGTCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: TRKDEIFLLPRSCLWRAGRAWLS*EDMSSA
Trigger: AGCTGAGGACATGTCTTCCAAACTCAACCAAGCCCG...CCCTGCTCTCCACAAACAGCTCCTAGGGAGCAGAAAAATCTCATCCTTCCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CAA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGATGCTTCGGGCTTGGTaGAGTTTGGAAGACATGTCC +
Preference number: 5 (lower is better)
Translates to: LNSSTDSLLEQQDADREKMLRAW*SLEDMS
Trigger: GGACATGTCTTCCAAACTCAACCAAGCCCGAAGCAT...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTCTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCAAGAGCTTGGATACTTGTGTaGATGTCACCACTGGCTACT +
Preference number: 5 (lower is better)
Translates to: LWAQSCVPLVSKVVGCPRAWILV*MSPLAT
Trigger: AGTAGCCAGTGGTGACATCAACACAAGTATCCAAGC...TCTTGGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CAA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACAGGGCACTCAGGATGTaGGTCTGGTCTGACTTCTCC +
Preference number: 5 (lower is better)
Translates to: AFIQNTVTLQGDREELTNRALRM*VWSDFS
Trigger: GGAGAAGTCAGACCAGACCAACATCCTGAGTGCCCT...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAATGGGAGAACTGGCTGTaGCTAGCAGGCTGTCTTGGA +
Preference number: 5 (lower is better)
Translates to: DSLLEQQDADREKQSMYKWENWL*LAGCLG
Trigger: TCCAAGACAGCCTGCTAGCAACAGCCAGTTCTCCCA...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTACAAGCTCTGAGAATTaGGGAGAACTGGCTGTTGCT +
Preference number: 5 (lower is better)
Translates to: SSTDSLLEQQDADREKQSTSSEN*GELAVA
Trigger: AGCAACAGCCAGTTCTCCCAAATTCTCAGAGCTTGT...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GCTGTGGAGCATGTCTGTGGAAGAGGCGACAGTAGGAACTGCTGGTTTGGAGAGTCAGACTCGTTTTTGTaGTCGATCATCGTTAGGTGG +
Preference number: 5 (lower is better)
Translates to: AVEHVCGRGDSRNCWFGESDSFL*SIIVRW
Trigger: CCACCTAACGATGATCGACAACAAAAACGAGTCTGA...CTCTCCAAACCAGCAGTTCCTACTGTCGCCTCTTCCACAGACATGCTCCACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS-3UTR CAA 90 bp CTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCAAGAGCAGCTCAGACTCGTTTTaGTTGTCGATCATCGTTAGG +
Preference number: 5 (lower is better)
Translates to: LGAILCAFGQQSGRMPKSSSDSF*LSIIVR
Trigger: CCTAACGATGATCGACAACAAAAACGAGTCTGAGCT...GCTCTTGGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CAA 90 bp GGAGAGCAAAGAGGTCAAAGGAGGTCGGTCATCTTGCTATTGAGAGAAGGAGAGGTGGAAATACGACCTTaGCCCTCCCTCTCCATCTCA +
Preference number: 5 (lower is better)
Translates to: GEQRGQRRSVILLLREGEVEIRP*PSLSIS
Trigger: TGAGATGGAGAGGGAGGGCAAAGGTCGTATTTCCAC...CTCTCCTTCTCTCAATAGCAAGATGACCGACCTCCTTTGACCTCTTTGCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS-3UTR CAA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTTCATCTTGCTTTGTGTaGTCCAGACCACATCGCTGT +
Preference number: 5 (lower is better)
Translates to: SSTDSLLEQQDADREKQSSSCFV*SRPHRC
Trigger: ACAGCGATGTGGTCTGGACAACACAAAGCAAGATGA...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGGTCGGTCATCTTGCTTaGTGTTGTCCAGACCACATC +
Preference number: 5 (lower is better)
Translates to: LNSSTDSLLEQQDADREKVGHLA*CCPDHI
Trigger: GATGTGGTCTGGACAACACAAAGCAAGATGACCGAC...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGGTGGGGCAGCTTCATTaGCGACTGCTCTTTATTCTC +
Preference number: 5 (lower is better)
Translates to: TLNSSTDSLLEQQDADREVGQLH*RLLFIL
Trigger: GAGAATAAAGAGCAGTCGCAAATGAAGCTGCCCCAC...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTCAATCTTGTGTGCCTTaGGTCAGCAAAGTGGTAGGA +
Preference number: 5 (lower is better)
Translates to: SSTDSLLEQQDADREKQSQSCVP*VSKVVG
Trigger: TCCTACCACTTTGCTGACCAAAGGCACACAAGATTG...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS TCA 90 bp CCCTTGCGTAACATGTTGGCATTGGAGCTTATGTTCTGTGCACGCTaGGGTTTCTCTTCCACCTGTTTTATTGGTGCAGCAGAGGGTCTC +
Preference number: 5 (lower is better)
Translates to: PLRNMLALELMFCAR*GFSSTCFIGAAEGL
Trigger: GAGACCCTCTGCTGCACCAATAAAACAGGTGGAAGAGAAACCTCAGCGTGCACAGAACATAAGCTCCAATGCCAACATGTTACGCAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
ENST00000533413.5
CDS TCA 90 bp CTGACTTCTCCAGAACCTTCACCACCAAGAGGTTCACAGAGCGGATaGCCTGTTGTCCTTCCTCAAGATCTTCAATCCGAGAATCCAGCA +
Preference number: 5 (lower is better)
Translates to: LTSPEPSPPRGSQSG*PVVLPQDLQSENPA
Trigger: TGCTGGATTCTCGGATTGAAGATCTTGAGGAAGGACAACAGGTCATCCGCTCTGTGAACCTCTTGGTGGTGAAGGTTCTGGAGAAGTCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
ENST00000533413.5
CDS GCA 90 bp TCAAGATCTTCAATCCGAGAATCCAGCATTAAGGTGATGAGGCCATaGATTAGGTCTTTTAGTACTCCAGTGGAGGCCTCCCGGGCAAGG +
Preference number: 5 (lower is better)
Translates to: SRSSIRESSIKVMRP*IRSFSTPVEASRAR
Trigger: CCTTGCCCGGGAGGCCTCCACTGGAGTACTAAAAGACCTAATGCATGGCCTCATCACCTTAATGCTGGATTCTCGGATTGAAGATCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
ENST00000533413.5
CDS GCA 90 bp TTTTCTGTTTCCTTATCAGACTTGCTCCCAGTCTGGTCCATACTGTaGTTCATCATCCGGCAGAGATGGGCCTCCAGCTCAGACTCGTTT +
Preference number: 5 (lower is better)
Translates to: FSVSLSDLLPVWSIL*FIIRQRWASSSDSF
Trigger: AAACGAGTCTGAGCTGGAGGCCCATCTCTGCCGGATGATGAAGCACAGTATGGACCAGACTGGGAGCAAGTCTGATAAGGAAACAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000525896.1
ENST00000529230.6
ENST00000533413.5
CDS CCA 90 bp TGGAAGACATGTCCTCAGCTGGTCCCTTGCGTAACATGTTGGCATTaGAGCTTATGTTCTGTGCACGCTGAGGTTTCTCTTCCACCTGTT +
Preference number: 5 (lower is better)
Translates to: WKTCPQLVPCVTCWH*SLCSVHAEVSLPPV
Trigger: AACAGGTGGAAGAGAAACCTCAGCGTGCACAGAACATAAGCTCCAATGCCAACATGTTACGCAAGGGACCAGCTGAGGACATGTCTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
ENST00000533413.5
CDS-3UTR CAA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTCATACCCACTTAACCTaGCTTTCCACAGCTTGTGTT +
Preference number: 5 (lower is better)
Translates to: SSTDSLLEQQDADREKQSHTHLT*LSTACV
Trigger: AACACAAGCTGTGGAAAGCAAGGTTAAGTGGGTATG...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTCAGGCCACTATGATCTaGGGATTCTTATTGTCCAAG +
Preference number: 5 (lower is better)
Translates to: SSTDSLLEQQDADREKQSQATMI*GFLLSK
Trigger: CTTGGACAATAAGAATCCCAAGATCATAGTGGCCTG...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGCCACCAACATGACATaGGTGTCCTTTCCAACAACC +
Preference number: 5 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTATNMT*VSFPTT
Trigger: GGTTGTTGGAAAGGACACCAATGTCATGTTGGTGGC...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATTTCTCCAAGATGGTaGGCACAACATGTCCTGCAT +
Preference number: 5 (lower is better)
Translates to: SSTDSLLEQQDADREKQSISPRW*AQHVLH
Trigger: ATGCAGGACATGTTGTGCCAACCATCTTGGAGAAAT...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGGGAAGATTGCATCAATaGCCTCCTGCAGGGCTTGTA +
Preference number: 5 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRGRLHQ*PPAGLV
Trigger: TACAAGCCCTGCAGGAGGCAATTGATGCAATCTTCC...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCAAGAGCTCAGGAGCAGAATCATaGATGTGCTTAAGTAGTGCA +
Preference number: 5 (lower is better)
Translates to: LGAILCAFGQQSGRMPKSSGAES*MCLSSA
Trigger: TGCACTACTTAAGCACATCAATGATTCTGCTCCTGA...GCTCTTGGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CAA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGTGGAAATTCCTCTGGTaGGAGCAGGTGGACTTTGTC +
Preference number: 5 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRWKFLW*EQVDFV
Trigger: GACAAAGTCCACCTGCTCCAACCAGAGGAATTTCCA...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGTGGAAATTCCTCTGGTaGGAGCAGGTGGACTTTGTC +
Preference number: 5 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTWKFLW*EQVDFV
Trigger: GACAAAGTCCACCTGCTCCAACCAGAGGAATTTCCA...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGGGCTACTGCCAGTTGTaGCAGGATATTCAGCGTTTG +
Preference number: 5 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRGYCQL*QDIQRL
Trigger: CAAACGCTGAATATCCTGCAACAACTGGCAGTAGCC...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGCATGGCTACTGCCAGTaGTTGCAGGATATTCAGCGT +
Preference number: 5 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTHGYCQ*LQDIQR
Trigger: ACGCTGAATATCCTGCAACAACTGGCAGTAGCCATG...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GAACACAAATCTAGTTGTAGTGTGAGAACCACTGAAGCCCAGCCAATCTCTGGGGAATGGCAAGGCATCTaGGGCCTTCTTTCGCACATC +
Preference number: 5 (lower is better)
Translates to: EHKSSCSVRTTEAQPISGEWQGI*GLLSHI
Trigger: GATGTGCGAAAGAAGGCCCAAGATGCCTTGCCATTC...CCCAGAGATTGGCTGGGCTTCAGTGGTTCTCACACTACAACTAGATTTGTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CAA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGCTGGCATGTTAACTTaGGCTTTCTCTAGCATGGCC +
Preference number: 5 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTAGMLT*AFSSMA
Trigger: GGCCATGCTAGAGAAAGCCAAAGTTAACATGCCAGC...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGGAGCTTTGGCCTTTTTaGGATCAGGTTTGGGTTCTG +
Preference number: 5 (lower is better)
Translates to: TLNSSTDSLLEQQDADREELWPF*DQVWVL
Trigger: CAGAACCCAAACCTGATCCAAAAAAGGCCAAAGCTC...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCAAGAGCCTCTGCTTAGAGTTTTaGGATTTGGTTCCTTCCATG +
Preference number: 5 (lower is better)
Translates to: LGAILCAFGQQSGRMPKSLCLEF*DLVPSM
Trigger: CATGGAAGGAACCAAATCCAAAAACTCTAAGCAGAG...GCTCTTGGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CAA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGAGGCTTTTCCTGGGGTaGGTTGGCAAACATTCATGC +
Preference number: 5 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRRLFLG*VGKHSC
Trigger: GCATGAATGTTTGCCAACCAACCCCAGGAAAAGCCT...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAAGTGTTGAGTGCAGCATaGCGTACAGCATTGTCACGG +
Preference number: 5 (lower is better)
Translates to: DSLLEQQDADREKQSMYKVLSAA*RTALSR
Trigger: CCGTGACAATGCTGTACGCAATGCTGCACTCAACAC...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGACCGTTACAATGGTGTaGAGTGCAGCATTGCGTACA +
Preference number: 5 (lower is better)
Translates to: LNSSTDSLLEQQDADREKTVTMV*SAALRT
Trigger: TGTACGCAATGCTGCACTCAACACCATTGTAACGGT...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGTCCTCAGCTGGTCCCTaGCGTAACATGTTGGCATTG +
Preference number: 5 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAESSAGP*RNMLAL
Trigger: CAATGCCAACATGTTACGCAAGGGACCAGCTGAGGA...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGGAAACAGCCCGGATCTaGGGTTCAGGAATAAGGACT +
Preference number: 5 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRETARI*GSGIRT
Trigger: AGTCCTTATTCCTGAACCCAAGATCCGGGCTGTTTC...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGCTGTGTCAGAGCTaGGATACTTGTGTTGATGTC +
Preference number: 5 (lower is better)
Translates to: LNSSTDSLLEQQDADREKQLCQS*DTCVDV
Trigger: GACATCAACACAAGTATCCAAGCTCTGACACAGCTG...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312055.9
ENST00000354558.7
CDS-3UTR CAA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGAGAGCGGATGACCTGTaGTCCTTCCTCAAGATCTTC +
Preference number: 5 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTRADDL*SFLKIF
Trigger: GAAGATCTTGAGGAAGGACAACAGGTCATCCGCTCT...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCTGGGAGAACTGGCTGTaGCTAGCAGGCTGTCTTGGA +
Preference number: 5 (lower is better)
Translates to: DADREKQSMYKYLCHNDSWENWL*LAGCLG
Trigger: TCCAAGACAGCCTGCTAGCAACAGCCAGTTCTCCCA...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGAGGTGGTCCAGGATCTaGGGCCCTTTTAATTTGCAT +
Preference number: 5 (lower is better)
Translates to: LNSSTDSLLEQQDADREKRWSRI*GPFNLH
Trigger: ATGCAAATTAAAAGGGCCCAAGATCCTGGACCACCT...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACGTGGAAATACGACCTTaGCCCTCCCTCTCCATCTCA +
Preference number: 5 (lower is better)
Translates to: AFIQNTVTLQGDREELTNVEIRP*PSLSIS
Trigger: TGAGATGGAGAGGGAGGGCAAAGGTCGTATTTCCAC...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGTCATCTTGCTTTGTGTaGTCCAGACCACATCGCTGT +
Preference number: 5 (lower is better)
Translates to: TLNSSTDSLLEQQDADRESSCFV*SRPHRC
Trigger: ACAGCGATGTGGTCTGGACAACACAAAGCAAGATGA...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS GCA 90 bp CACCTGATCCCCATGTACATTGTACACCGTTACAATGGTGTTGAGTaGAGCATTGCGTACAGCATTGTCACGGTCTCCTATGTGAACAGC +
Preference number: 5 (lower is better)
Translates to: HLIPMYIVHRYNGVE*SIAYSIVTVSYVNS
Trigger: GCTGTTCACATAGGAGACCGTGACAATGCTGTACGCAATGCTGCACTCAACACCATTGTAACGGTGTACAATGTACATGGGGATCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
ENST00000533413.5
CDS-3UTR CAA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGATCTTGGGATTCTTATaGTCCAAGCCTTTCAGGAGC +
Preference number: 5 (lower is better)
Translates to: LNSSTDSLLEQQDADREKILGFL*SKPFRS
Trigger: GCTCCTGAAAGGCTTGGACAATAAGAATCCCAAGAT...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGATCTTGGGATTCTTATaGTCCAAGCCTTTCAGGAGC +
Preference number: 5 (lower is better)
Translates to: TLNSSTDSLLEQQDADREILGFL*SKPFRS
Trigger: GCTCCTGAAAGGCTTGGACAATAAGAATCCCAAGAT...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACAAGGAAGGATGAGATTTTTCTGCTCCCTAGGAGCTGTTTGTGGAGAGCAGGGTCCACAGCAATTAGTTaGGCTTCATCTCGAACAGCC +
Preference number: 5 (lower is better)
Translates to: TRKDEIFLLPRSCLWRAGSTAIS*ASSRTA
Trigger: GGCTGTTCGAGATGAAGCCAAACTAATTGCTGTGGA...CCCTGCTCTCCACAAACAGCTCCTAGGGAGCAGAAAAATCTCATCCTTCCTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CAA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGGGCTTGTACCACTaGAGGTTTCTTCTCTTTGAA +
Preference number: 5 (lower is better)
Translates to: LNSSTDSLLEQQDADREKQGLYH*RFLLFE
Trigger: TTCAAAGAGAAGAAACCTCAAGTGGTACAAGCCCTG...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGATGCCTCCTGCAGGGCTaGTACCACTTGAGGTTTCTT +
Preference number: 5 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRCLLQG*YHLRFL
Trigger: AAGAAACCTCAAGTGGTACAAGCCCTGCAGGAGGCA...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCTTCCAGGCAGAGGTTaGAATTCCTTCTTATCAGCA +
Preference number: 5 (lower is better)
Translates to: LNSSTDSLLEQQDADREKLPGRG*NSFLSA
Trigger: TGCTGATAAGAAGGAATTCAAACCTCTGCCTGGAAG...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGAGTCCTTTCTTGTTCTaGGTTCCAGTATTCCCTGCG +
Preference number: 5 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTSPFLF*VPVFPA
Trigger: CGCAGGGAATACTGGAACCAAGAACAAGAAAGGACT...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTTTCACATCTCCAATCTaGTCCACAAGGCCATCTAAT +
Preference number: 5 (lower is better)
Translates to: SSTDSLLEQQDADREKQSFTSPI*STRPSN
Trigger: ATTAGATGGCCTTGTGGACAAGATTGGAGATGTGAA...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CAATCTCTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCTTCACATCTCCAATCTaGTCCACAAGGCCATCTAAT +
Preference number: 5 (lower is better)
Translates to: QSLGAILCAFGQQSGRMPFTSPI*STRPSN
Trigger: ATTAGATGGCCTTGTGGACAAGATTGGAGATGTGAA...GGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAGAGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CAA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACGGCTACTGCCAGTTGTaGCAGGATATTCAGCGTTTG +
Preference number: 5 (lower is better)
Translates to: AFIQNTVTLQGDREELTNGYCQL*QDIQRL
Trigger: CAAACGCTGAATATCCTGCAACAACTGGCAGTAGCC...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACGCTCGAACATTGTTCTaGCTGTCTCCAAGGACTGTG +
Preference number: 5 (lower is better)
Translates to: AFIQNTVTLQGDREELTNARTLF*LSPRTV
Trigger: CACAGTCCTTGGAGACAGCAAGAACAATGTTCGAGC...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGTGGGTGGAGCAGGCTaGGCTGGCATGTTAACTTTG +
Preference number: 5 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRAVGGAG*AGMLTL
Trigger: CAAAGTTAACATGCCAGCCAAGCCTGCTCCACCCAC...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGAGCTTTGGCCTTTTTaGGATCAGGTTTGGGTTCTG +
Preference number: 5 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTELWPF*DQVWVL
Trigger: CAGAACCCAAACCTGATCCAAAAAAGGCCAAAGCTC...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGTCCTTTAAGCTGGTTTaGCTTGGCATCTTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: LNSSTDSLLEQQDADREKSFKLV*LGIFFP
Trigger: AGGGAAGAAGATGCCAAGCAAAACCAGCTTAAAGGA...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTAAAATAGGCCCGGATTaGTCTTCATCCTCCTTTAAG +
Preference number: 5 (lower is better)
Translates to: SSTDSLLEQQDADREKQSKIGPD*SSSSFK
Trigger: CTTAAAGGAGGATGAAGACAAATCCGGGCCTATTTT...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGTTTTCCTGGGGTTGGTaGGCAAACATTCATGCCATA +
Preference number: 5 (lower is better)
Translates to: TLNSSTDSLLEQQDADREFSWGW*ANIHAI
Trigger: TATGGCATGAATGTTTGCCAACCAACCCCAGGAAAA...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACAGGCTTTTCCTGGGGTaGGTTGGCAAACATTCATGC +
Preference number: 5 (lower is better)
Translates to: AFIQNTVTLQGDREELTNRLFLG*VGKHSC
Trigger: GCATGAATGTTTGCCAACCAACCCCAGGAAAAGCCT...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGGTGTTGAGTGCAGCATaGCGTACAGCATTGTCACGG +
Preference number: 5 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLEVLSAA*RTALSR
Trigger: CCGTGACAATGCTGTACGCAATGCTGCACTCAACAC...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGACCGTTACAATGGTGTaGAGTGCAGCATTGCGTACA +
Preference number: 5 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRTVTMV*SAALRT
Trigger: TGTACGCAATGCTGCACTCAACACCATTGTAACGGT...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACCTTCCACCTGTTTTATaGGTGCAGCAGAGGGTCTCT +
Preference number: 5 (lower is better)
Translates to: AFIQNTVTLQGDREELTNLPPVL*VQQRVS
Trigger: AGAGACCCTCTGCTGCACCAATAAAACAGGTGGAAG...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGACGGGCTTGGTTGAGTTaGGAAGACATGTCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRRAWLS*EDMSSA
Trigger: AGCTGAGGACATGTCTTCCAAACTCAACCAAGCCCG...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACGAAACAGCCCGGATCTaGGGTTCAGGAATAAGGACT +
Preference number: 5 (lower is better)
Translates to: AFIQNTVTLQGDREELTNETARI*GSGIRT
Trigger: AGTCCTTATTCCTGAACCCAAGATCCGGGCTGTTTC...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGCTTGGATACTTGTGTaGATGTCACCACTGGCTACT +
Preference number: 5 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTAWILV*MSPLAT
Trigger: AGTAGCCAGTGGTGACATCAACACAAGTATCCAAGC...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGGCTTGGATACTTGTGTaGATGTCACCACTGGCTACT +
Preference number: 5 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRAWILV*MSPLAT
Trigger: AGTAGCCAGTGGTGACATCAACACAAGTATCCAAGC...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGCAGCTGTGTCAGAGCTaGGATACTTGTGTTGATGTC +
Preference number: 5 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTQLCQS*DTCVDV
Trigger: GACATCAACACAAGTATCCAAGCTCTGACACAGCTG...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312055.9
ENST00000354558.7
CDS-3UTR CAA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAAGGGCACTCAGGATGTaGGTCTGGTCTGACTTCTCC +
Preference number: 5 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRARALRM*VWSDFS
Trigger: GGAGAAGTCAGACCAGACCAACATCCTGAGTGCCCT...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGTGGGAGAACTGGCTGTaGCTAGCAGGCTGTCTTGGA +
Preference number: 5 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQWENWL*LAGCLG
Trigger: TCCAAGACAGCCTGCTAGCAACAGCCAGTTCTCCCA...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GGAGAGCAAAGAGGTCAAAGGAGGTCGGTCATCTTGCTATTGAGAGAAGGAGAGAGGTGGTCCAGGATCTaGGGCCCTTTTAATTTGCAT +
Preference number: 5 (lower is better)
Translates to: GEQRGQRRSVILLLREGERWSRI*GPFNLH
Trigger: ATGCAAATTAAAAGGGCCCAAGATCCTGGACCACCT...CTCTCCTTCTCTCAATAGCAAGATGACCGACCTCCTTTGACCTCTTTGCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS-3UTR CAA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGTCAGACTCGTTTTTGTaGTCGATCATCGTTAGGTGG +
Preference number: 5 (lower is better)
Translates to: TLNSSTDSLLEQQDADRESDSFL*SIIVRW
Trigger: CCACCTAACGATGATCGACAACAAAAACGAGTCTGA...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GAGTTTGCTGTGGAGCATGTCTGTGGAAGAGGCGACAGTAGGAACTGCTGGTTTAGCTCAGACTCGTTTTaGTTGTCGATCATCGTTAGG +
Preference number: 5 (lower is better)
Translates to: EFAVEHVCGRGDSRNCWFSSDSF*LSIIVR
Trigger: CCTAACGATGATCGACAACAAAAACGAGTCTGAGCT...AAACCAGCAGTTCCTACTGTCGCCTCTTCCACAGACATGCTCCACAGCAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS-3UTR CAA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGGTTTCCTTATCAGACTaGCTCCCAGTCTGGTCCATA +
Preference number: 5 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRVSLSD*LPVWSI
Trigger: TATGGACCAGACTGGGAGCAAGTCTGATAAGGAAAC...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGAGGGGAGATGCCTGTaGAAGTGGAAATACGACCTT +
Preference number: 5 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAEEGRCL*KWKYDL
Trigger: AAGGTCGTATTTCCACTTCAACAGGCATCTCCCCTC...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGCCACTTCTTCCCCATTaGTGTTACCTATGGAGGACA +
Preference number: 5 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTPLLPH*CYLWRT
Trigger: TGTCCTCCATAGGTAACACAAATGGGGAAGAAGTGG...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAAGTCGGTCATCTTGCTTaGTGTTGTCCAGACCACATC +
Preference number: 5 (lower is better)
Translates to: DSLLEQQDADREKQSMYKVGHLA*CCPDHI
Trigger: GATGTGGTCTGGACAACACAAAGCAAGATGACCGAC...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTAGTATGTACAAATACTaGTGCCACAATGACTCCTCC +
Preference number: 5 (lower is better)
Translates to: SSTDSLLEQQDADREKQSSMYKY*CHNDSS
Trigger: GGAGGAGTCATTGTGGCACAAGTATTTGTACATACT...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GGAGAGCAAAGAGGTCAAAGGAGGTCGGTCATCTTGCTATTGAGAGAAGGAGAGAGAGAAGGAGAGAGATaGTCTAAGGTCAGGTCAAGC +
Preference number: 5 (lower is better)
Translates to: GEQRGQRRSVILLLREGEREGER*SKVRSS
Trigger: GCTTGACCTGACCTTAGACAATCTCTCTCCTTCTCT...CTCTCCTTCTCTCAATAGCAAGATGACCGACCTCCTTTGACCTCTTTGCTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS-3UTR CAA 90 bp CTCTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCAAGAATACAGCTATACAACTaGATGATCTCGTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LWAQSCVPLVSKVVGCPRIQLYN*MISSFS
Trigger: GGAGAAGGACGAGATCATCAAGTTGTATAGCTGTAT...TCTTGGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CAA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGCACTGTCATCTCCCATaGTGCTTCCAGGTTTTCCTT +
Preference number: 5 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAEHCHLP*CFQVFL
Trigger: AAGGAAAACCTGGAAGCACAATGGGAGATGACAGTG...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGTTTCAGGAGCTCTTCTaGAACAGCCTCTCCTTTCTC +
Preference number: 5 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAEFQELF*NSLSFL
Trigger: GAGAAAGGAGAGGCTGTTCAAGAAGAGCTCCTGAAA...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAATTTCAGGAGCTCTTCTaGAACAGCCTCTCCTTTCTC +
Preference number: 5 (lower is better)
Translates to: DSLLEQQDADREKQSMYKFQELF*NSLSFL
Trigger: GAGAAAGGAGAGGCTGTTCAAGAAGAGCTCCTGAAA...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCAGGCCACTATGATCTaGGGATTCTTATTGTCCAAG +
Preference number: 5 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRQATMI*GFLLSK
Trigger: CTTGGACAATAAGAATCCCAAGATCATAGTGGCCTG...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGCAGGCCACTATGATCTaGGGATTCTTATTGTCCAAG +
Preference number: 5 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTQATMI*GFLLSK
Trigger: CTTGGACAATAAGAATCCCAAGATCATAGTGGCCTG...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCAAGAGCAGTTTTGGCAACACTTaGATAATTGGCTTAAGCAAG +
Preference number: 5 (lower is better)
Translates to: LGAILCAFGQQSGRMPKSSFGNT*IIGLSK
Trigger: CTTGCTTAAGCCAATTATCAAAGTGTTGCCAAAACT...GCTCTTGGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CAA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGGCACTTGTTGGCAGTTaGACCCATTCTTCTTCTAGT +
Preference number: 5 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRALVGS*THSSSS
Trigger: ACTAGAAGAAGAATGGGTCAAACTGCCAACAAGTGC...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACAAGGAAGGATGAGATTTTTCTGCTCCCTAGGAGCTGTTTGTGGAGAGCAGGGATTTCTCCAAGATGGTaGGCACAACATGTCCTGCAT +
Preference number: 5 (lower is better)
Translates to: TRKDEIFLLPRSCLWRAGISPRW*AQHVLH
Trigger: ATGCAGGACATGTTGTGCCAACCATCTTGGAGAAAT...CCCTGCTCTCCACAAACAGCTCCTAGGGAGCAGAAAAATCTCATCCTTCCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CAA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGCAGGGCTTGTACCACTaGAGGTTTCTTCTCTTTGAA +
Preference number: 5 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTQGLYH*RFLLFE
Trigger: TTCAAAGAGAAGAAACCTCAAGTGGTACAAGCCCTG...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGGAAGATTGCATCAATaGCCTCCTGCAGGGCTTGTA +
Preference number: 5 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRGRLHQ*PPAGLV
Trigger: TACAAGCCCTGCAGGAGGCAATTGATGCAATCTTCC...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGTTTAGAGGTCCTGGTTaGGGTGCAGAAATGTCCTTT +
Preference number: 5 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRFRGPG*GAEMSF
Trigger: AAAGGACATTTCTGCACCCAAACCAGGACCTCTAAA...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGTTCCATCCAGGTTTCTaGGCTAGCATCCTCACTAAT +
Preference number: 5 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTFHPGF*ASILTN
Trigger: ATTAGTGAGGATGCTAGCCAAGAAACCTGGATGGAA...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGTTTGTGAGAAAGCCATaGACACAACCTGTTCAGCAG +
Preference number: 5 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTFVRKP*TQPVQQ
Trigger: CTGCTGAACAGGTTGTGTCAATGGCTTTCTCACAAA...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGATGGAAATTCCTCTGGTaGGAGCAGGTGGACTTTGTC +
Preference number: 5 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRWKFLW*EQVDFV
Trigger: GACAAAGTCCACCTGCTCCAACCAGAGGAATTTCCA...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACCCACTTGTGCTATGCTaGGAAATTCCTCTGGTTGGA +
Preference number: 5 (lower is better)
Translates to: AFIQNTVTLQGDREELTNPLVLC*EIPLVG
Trigger: TCCAACCAGAGGAATTTCCAAGCATAGCACAAGTGG...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAAAGATCAACGACATCATaGCTCCCGTCATCTGGTTCA +
Preference number: 5 (lower is better)
Translates to: DSLLEQQDADREKQSMYKRSTTS*LPSSGS
Trigger: TGAACCAGATGACGGGAGCAATGATGTCGTTGATCT...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAAGACCCTTCAAGGCAGTaGGAAGTTCACCTATATTCG +
Preference number: 5 (lower is better)
Translates to: DSLLEQQDADREKQSMYKDPSRQ*EVHLYS
Trigger: CGAATATAGGTGAACTTCCAACTGCCTTGAAGGGTC...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCTCGAACATTGTTCTaGCTGTCTCCAAGGACTGTG +
Preference number: 5 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRARTLF*LSPRTV
Trigger: CACAGTCCTTGGAGACAGCAAGAACAATGTTCGAGC...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCCCAGCCCAGAAGCTCTaGCCTCAAGAAAGGATTTTC +
Preference number: 5 (lower is better)
Translates to: DADREKQSMYKYLCHNDSPAQKL*PQERIF
Trigger: GAAAATCCTTTCTTGAGGCAAGAGCTTCTGGGCTGG...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGAATGGCAAGGCATCTaGGGCCTTCTTTCGCACATC +
Preference number: 5 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRAEWQGI*GLLSHI
Trigger: GATGTGCGAAAGAAGGCCCAAGATGCCTTGCCATTC...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGAGCTTTGGCCTTTTTaGGATCAGGTTTGGGTTCTG +
Preference number: 5 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAEELWPF*DQVWVL
Trigger: CAGAACCCAAACCTGATCCAAAAAAGGCCAAAGCTC...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGTCCTCAGCTGGTCCCTaGCGTAACATGTTGGCATTG +
Preference number: 5 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQSSAGP*RNMLAL
Trigger: CAATGCCAACATGTTACGCAAGGGACCAGCTGAGGA...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGGAAACAGCCCGGATCTaGGGTTCAGGAATAAGGACT +
Preference number: 5 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLEETARI*GSGIRT
Trigger: AGTCCTTATTCCTGAACCCAAGATCCGGGCTGTTTC...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGAGAGCGGATGACCTGTaGTCCTTCCTCAAGATCTTC +
Preference number: 5 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLERADDL*SFLKIF
Trigger: GAAGATCTTGAGGAAGGACAACAGGTCATCCGCTCT...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACAGGGCACTCAGGATGTaGGTCTGGTCTGACTTCTCC +
Preference number: 5 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDRALRM*VWSDFS
Trigger: GGAGAAGTCAGACCAGACCAACATCCTGAGTGCCCT...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACACAAGCTCTGAGAATTaGGGAGAACTGGCTGTTGCT +
Preference number: 5 (lower is better)
Translates to: AFIQNTVTLQGDREELTNTSSEN*GELAVA
Trigger: AGCAACAGCCAGTTCTCCCAAATTCTCAGAGCTTGT...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CAATCTCTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCTCTAGGTTAATGCTATaGATGGTATCAGGCAACAGT +
Preference number: 5 (lower is better)
Translates to: QSLGAILCAFGQQSGRMPSRLML*MVSGNS
Trigger: ACTGTTGCCTGATACCATCAATAGCATTAACCTAGA...GGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAGAGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CAA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGAGGTGGTCCAGGATCTaGGGCCCTTTTAATTTGCAT +
Preference number: 5 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAERWSRI*GPFNLH
Trigger: ATGCAAATTAAAAGGGCCCAAGATCCTGGACCACCT...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GAACACAAATCTAGTTGTAGTGTGAGAACCACTGAAGCCCAGCCAATCTCTGGGGTTTCCTTATCAGACTaGCTCCCAGTCTGGTCCATA +
Preference number: 5 (lower is better)
Translates to: EHKSSCSVRTTEAQPISGVSLSD*LPVWSI
Trigger: TATGGACCAGACTGGGAGCAAGTCTGATAAGGAAAC...CCCAGAGATTGGCTGGGCTTCAGTGGTTCTCACACTACAACTAGATTTGTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CAA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGGTGGAAATACGACCTTaGCCCTCCCTCTCCATCTCA +
Preference number: 5 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQVEIRP*PSLSIS
Trigger: TGAGATGGAGAGGGAGGGCAAAGGTCGTATTTCCAC...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGAGGGGAGATGCCTGTaGAAGTGGAAATACGACCTT +
Preference number: 5 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSREGRCL*KWKYDL
Trigger: AAGGTCGTATTTCCACTTCAACAGGCATCTCCCCTC...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGGAGGGGAGATGCCTGTaGAAGTGGAAATACGACCTT +
Preference number: 5 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLEEGRCL*KWKYDL
Trigger: AAGGTCGTATTTCCACTTCAACAGGCATCTCCCCTC...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAACCACTTCTTCCCCATTaGTGTTACCTATGGAGGACA +
Preference number: 5 (lower is better)
Translates to: DSLLEQQDADREKQSMYKPLLPH*CYLWRT
Trigger: TGTCCTCCATAGGTAACACAAATGGGGAAGAAGTGG...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACTCATCTTGCTTTGTGTaGTCCAGACCACATCGCTGT +
Preference number: 5 (lower is better)
Translates to: AFIQNTVTLQGDREELTNSSCFV*SRPHRC
Trigger: ACAGCGATGTGGTCTGGACAACACAAAGCAAGATGA...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp TTTGGAGAGCAAAGAGGTCAAAGGAGGTCGGTCATCTTGCTATTGAGAGAAGGAAGCAGTACCTTTGTGTaGTCCAGACCACATCGCTGT +
Preference number: 5 (lower is better)
Translates to: FGEQRGQRRSVILLLREGSSTFV*SRPHRC
Trigger: ACAGCGATGTGGTCTGGACAACACAAAGGTACTGCT...TCCTTCTCTCAATAGCAAGATGACCGACCTCCTTTGACCTCTTTGCTCTCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS-3UTR CAA 90 bp GTTTGGAGAGCAAAGAGGTCAAAGGAGGTCGGTCATCTTGCTATTGAGAGAAGGAAAGGAGCAGTACCTTaGTGTTGTCCAGACCACATC +
Preference number: 5 (lower is better)
Translates to: VWRAKRSKEVGHLAIERRKGAVP*CCPDHI
Trigger: GATGTGGTCTGGACAACACAAAGGTACTGCTCCTTT...CCTTCTCTCAATAGCAAGATGACCGACCTCCTTTGACCTCTTTGCTCTCCAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS TCA 90 bp TTTCTCTTCCACCTGTTTTATTGGTGCAGCAGAGGGTCTCTTTGCTaGCCGCTTAATCCTCTCCTCGAGCATGCTCATATCCTTTTCAGA +
Preference number: 5 (lower is better)
Translates to: FLFHLFYWCSRGSLC*PLNPLLEHAHILFR
Trigger: TCTGAAAAGGATATGAGCATGCTCGAGGAGAGGATTAAGCGGTCAGCAAAGAGACCCTCTGCTGCACCAATAAAACAGGTGGAAGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
ENST00000533413.5
CDS GCA 90 bp TGCTTTCTCGCCAACCACCTTCAAAGCAGTACCCAATGCTTCAAATaGGGCATCTCTGACTTCAGGAGCAGAATCATTGATGTGCTTAAG +
Preference number: 5 (lower is better)
Translates to: CFLANHLQSSTQCFK*GISDFRSRIIDVLK
Trigger: CTTAAGCACATCAATGATTCTGCTCCTGAAGTCAGAGATGCCGCATTTGAAGCATTGGGTACTGCTTTGAAGGTGGTTGGCGAGAAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS GCA 90 bp TGGGTTTACTGCTTTCTCGCCAACCACCTTCAAAGCAGTACCCAATaGTTCAAATGCGGCATCTCTGACTTCAGGAGCAGAATCATTGAT +
Preference number: 5 (lower is better)
Translates to: WVYCFLANHLQSSTQ*FKCGISDFRSRIID
Trigger: ATCAATGATTCTGCTCCTGAAGTCAGAGATGCCGCATTTGAAGCATTGGGTACTGCTTTGAAGGTGGTTGGCGAGAAAGCAGTAAACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS GCA 90 bp ACAACCTTCAGGAAGTCCATGGGGACTCTAAATTGTGAATGCTACTaGATTCTTCTGAGAACCATTCTTCTGAGGGAGCTTCTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: TTFRKSMGTLNCECY*ILLRTILLRELLAL
Trigger: CAAGGCCAGAAGCTCCCTCAGAAGAATGGTTCTCAGAAGAATGCAGTAGCATTCACAATTTAGAGTCCCCATGGACTTCCTGAAGGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532321.1
CDS CCA 90 bp TCCTTCATCTGTACCACTTGTGCTATGCTTGGAAATTCCTCTGGTTaGAGCAGGTGGACTTTGTCCCTGCATCTTCTCAAATTCTGCATC +
Preference number: 5 (lower is better)
Translates to: SFICTTCAMLGNSSG*SRWTLSLHLLKFCI
Trigger: GATGCAGAATTTGAGAAGATGCAGGGACAAAGTCCACCTGCTCCAACCAGAGGAATTTCCAAGCATAGCACAAGTGGTACAGATGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS CCA 90 bp CTTCTCCTTCATCTGTACCACTTGTGCTATGCTTGGAAATTCCTCTaGTTGGAGCAGGTGGACTTTGTCCCTGCATCTTCTCAAATTCTG +
Preference number: 5 (lower is better)
Translates to: LLLHLYHLCYAWKFL*LEQVDFVPASSQIL
Trigger: CAGAATTTGAGAAGATGCAGGGACAAAGTCCACCTGCTCCAACCAGAGGAATTTCCAAGCATAGCACAAGTGGTACAGATGAAGGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGGGCTTTAGCTTTAGGTaGATTGAACACCTTACTTAC +
Preference number: 5 (lower is better)
Translates to: LNSSTDSLLEQQDADREKGFSFR*IEHLTY
Trigger: GTAAGTAAGGTGTTCAATCAACCTAAAGCTAAAGCC...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCTCCACAGCAATTAGTTaGGCTTCATCTCGAACAGCC +
Preference number: 5 (lower is better)
Translates to: DADREKQSMYKYLCHNDSSTAIS*ASSRTA
Trigger: GGCTGTTCGAGATGAAGCCAAACTAATTGCTGTGGA...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GAACACAAATCTAGTTGTAGTGTGAGAACCACTGAAGCCCAGCCAATCTCTGGGGCACTTGTTGGCAGTTaGACCCATTCTTCTTCTAGT +
Preference number: 5 (lower is better)
Translates to: EHKSSCSVRTTEAQPISGALVGS*THSSSS
Trigger: ACTAGAAGAAGAATGGGTCAAACTGCCAACAAGTGC...CCCAGAGATTGGCTGGGCTTCAGTGGTTCTCACACTACAACTAGATTTGTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CAA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAACTCATAAGCATCTATTaGTGGCACCTCATCACCATC +
Preference number: 5 (lower is better)
Translates to: DSLLEQQDADREKQSMYKLISIY*WHLITI
Trigger: GATGGTGATGAGGTGCCACAAATAGATGCTTATGAG...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGAAGTCTTTGGGAAGTTaGGAAAGGATTTCTACAGCT +
Preference number: 5 (lower is better)
Translates to: LNSSTDSLLEQQDADREKKSLGS*ERISTA
Trigger: AGCTGTAGAAATCCTTTCCAAACTTCCCAAAGACTT...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGGCCACCAACATGACATaGGTGTCCTTTCCAACAACC +
Preference number: 5 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQATNMT*VSFPTT
Trigger: GGTTGTTGGAAAGGACACCAATGTCATGTTGGTGGC...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp TCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTAGAGATGTCTGCTGCTaGATGGTTGGATTTTTATTA +
Preference number: 5 (lower is better)
Translates to: SSTDSLLEQQDADREKQSRDVCC*MVGFLL
Trigger: TAATAAAAATCCAACCATCAAGCAGCAGACATCTCT...ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGGTGCAGAAATGTCCTTaGTGTCCTTATCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLEVQKCP*CPYLLQ
Trigger: CTGCAGGAGATAAGGACACAAAGGACATTTCTGCAC...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACTTTAGAGGTCCTGGTTaGGGTGCAGAAATGTCCTTT +
Preference number: 5 (lower is better)
Translates to: AFIQNTVTLQGDREELTNFRGPG*GAEMSF
Trigger: AAAGGACATTTCTGCACCCAAACCAGGACCTCTAAA...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGAGTCCTTTCTTGTTCTaGGTTCCAGTATTCCCTGCG +
Preference number: 5 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLESPFLF*VPVFPA
Trigger: CGCAGGGAATACTGGAACCAAGAACAAGAAAGGACT...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCAGTCCTTTCTTGTTCTaGGTTCCAGTATTCCCTGCG +
Preference number: 5 (lower is better)
Translates to: DADREKQSMYKYLCHNDSSPFLF*VPVFPA
Trigger: CGCAGGGAATACTGGAACCAAGAACAAGAAAGGACT...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGTCACAGCTGGGTTTGTaGCAGCAAGAGCTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQSQLGL*QQELSS
Trigger: TGAAGACAGCTCTTGCTGCAACAAACCCAGCTGTGA...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAAGATCAACGACATCATaGCTCCCGTCATCTGGTTCA +
Preference number: 5 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRRSTTS*LPSSGS
Trigger: TGAACCAGATGACGGGAGCAATGATGTCGTTGATCT...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGGACCCTTCAAGGCAGTaGGAAGTTCACCTATATTCG +
Preference number: 5 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLEDPSRQ*EVHLYS
Trigger: CGAATATAGGTGAACTTCCAACTGCCTTGAAGGGTC...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCACATGGCTACTGCCAGTaGTTGCAGGATATTCAGCGT +
Preference number: 5 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRAHGYCQ*LQDIQR
Trigger: ACGCTGAATATCCTGCAACAACTGGCAGTAGCCATG...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACGCAGCAGCTCGAACATaGTTCTTGCTGTCTCCAAGG +
Preference number: 5 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDAAART*FLLSPR
Trigger: CCTTGGAGACAGCAAGAACAATGTTCGAGCTGCTGC...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACGAATGGCAAGGCATCTaGGGCCTTCTTTCGCACATC +
Preference number: 5 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDEWQGI*GLLSHI
Trigger: GATGTGCGAAAGAAGGCCCAAGATGCCTTGCCATTC...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGGCTGGCATGTTAACTTaGGCTTTCTCTAGCATGGCC +
Preference number: 5 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQAGMLT*AFSSMA
Trigger: GGCCATGCTAGAGAAAGCCAAAGTTAACATGCCAGC...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACTGGCATCTTCTTCCCTaGTGCACTCTTTGCTTTAGA +
Preference number: 5 (lower is better)
Translates to: AFIQNTVTLQGDREELTNWHLLP*CTLCFR
Trigger: TCTAAAGCAAAGAGTGCACAAGGGAAGAAGATGCCA...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGTCCTTTAAGCTGGTTTaGCTTGGCATCTTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAESFKLV*LGIFFP
Trigger: AGGGAAGAAGATGCCAAGCAAAACCAGCTTAAAGGA...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACTTTTCCTGGGGTTGGTaGGCAAACATTCATGCCATA +
Preference number: 5 (lower is better)
Translates to: AFIQNTVTLQGDREELTNFSWGW*ANIHAI
Trigger: TATGGCATGAATGTTTGCCAACCAACCCCAGGAAAA...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAATTTTCCTGGGGTTGGTaGGCAAACATTCATGCCATA +
Preference number: 5 (lower is better)
Translates to: DSLLEQQDADREKQSMYKFSWGW*ANIHAI
Trigger: TATGGCATGAATGTTTGCCAACCAACCCCAGGAAAA...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGCATCGGACTGTACCATaGTCATTCTCAATCTCATCT +
Preference number: 5 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTHRTVP*SFSISS
Trigger: AGATGAGATTGAGAATGACAATGGTACAGTCCGATG...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CAATCTCTGGGCGCAATCTTGTGTGCCTTTGGTCAGCAAAGTGGTAGGATGCCCATGGGAAATTCACTTTaGCATTGCTTCAGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: QSLGAILCAFGQQSGRMPMGNSL*HCFSFS
Trigger: AGAGAAACTGAAGCAATGCAAAAGTGAATTTCCCAT...GGGCATCCTACCACTTTGCTGACCAAAGGCACACAAGATTGCGCCCAGAGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CAA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAAGGTGGTCCAGGATCTaGGGCCCTTTTAATTTGCAT +
Preference number: 5 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRRWSRI*GPFNLH
Trigger: ATGCAAATTAAAAGGGCCCAAGATCCTGGACCACCT...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGTCAGACTCGTTTTTGTaGTCGATCATCGTTAGGTGG +
Preference number: 5 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAESDSFL*SIIVRW
Trigger: CCACCTAACGATGATCGACAACAAAAACGAGTCTGA...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACAGCTCAGACTCGTTTTaGTTGTCGATCATCGTTAGG +
Preference number: 5 (lower is better)
Translates to: AFIQNTVTLQGDREELTNSSDSF*LSIIVR
Trigger: CCTAACGATGATCGACAACAAAAACGAGTCTGAGCT...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp TTTGGAGAGCAAAGAGGTCAAAGGAGGTCGGTCATCTTGCTATTGAGAGAAGGACCACTTCTTCCCCATTaGTGTTACCTATGGAGGACA +
Preference number: 5 (lower is better)
Translates to: FGEQRGQRRSVILLLREGPLLPH*CYLWRT
Trigger: TGTCCTCCATAGGTAACACAAATGGGGAAGAAGTGG...TCCTTCTCTCAATAGCAAGATGACCGACCTCCTTTGACCTCTTTGCTCTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS-3UTR CAA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCCACTTCTTCCCCATTaGTGTTACCTATGGAGGACA +
Preference number: 5 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLEPLLPH*CYLWRT
Trigger: TGTCCTCCATAGGTAACACAAATGGGGAAGAAGTGG...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp AATGAACACAAATCTAGTTGTAGTGTGAGAACCACTGAAGCCCAGCCAATCTCTTCTCTGGGCGCAATCTaGTGTGCCTTTGGTCAGCAA +
Preference number: 5 (lower is better)
Translates to: NEHKSSCSVRTTEAQPISSLGAI*CAFGQQ
Trigger: TTGCTGACCAAAGGCACACAAGATTGCGCCCAGAGA...AGAGATTGGCTGGGCTTCAGTGGTTCTCACACTACAACTAGATTTGTGTTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS TCA 90 bp CAATTGCCTCCTGCAGGGCTTGTACCACTTGAGGTTTCTTCTCTTTaGATTTCTCCAAGATGGTTGGCACAACATGTCCTGCATATTGTC +
Preference number: 5 (lower is better)
Translates to: QLPPAGLVPLEVSSL*ISPRWLAQHVLHIV
Trigger: GACAATATGCAGGACATGTTGTGCCAACCATCTTGGAGAAATTCAAAGAGAAGAAACCTCAAGTGGTACAAGCCCTGCAGGAGGCAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
ENST00000532321.1
CDS TCA 90 bp GTCCTTTCCAACAACCTTCAGGAAGTCCATGGGGACTCTAAATTGTaGATGCTACTGCATTCTTCTGAGAACCATTCTTCTGAGGGAGCT +
Preference number: 5 (lower is better)
Translates to: VLSNNLQEVHGDSKL*MLLHSSENHSSEGA
Trigger: AGCTCCCTCAGAAGAATGGTTCTCAGAAGAATGCAGTAGCATTCACAATTTAGAGTCCCCATGGACTTCCTGAAGGTTGTTGGAAAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532321.1
CDS CCA 90 bp TTTGGATTTGGTTCCTTCCATGATAAAGGGAAACATCTTGCTAGCTaGGTAGACAAGGCACATCCGGTTCAGGATGGCACGAACATCTTT +
Preference number: 5 (lower is better)
Translates to: FGFGSFHDKGKHLAS*VDKAHPVQDGTNIF
Trigger: AAAGATGTTCGTGCCATCCTGAACCGGATGTGCCTTGTCTACCCAGCTAGCAAGATGTTTCCCTTTATCATGGAAGGAACCAAATCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
ENST00000533413.5
CDS-3UTR CAA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGACATACCCACTTAACCTaGCTTTCCACAGCTTGTGTT +
Preference number: 5 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRHTHLT*LSTACV
Trigger: AACACAAGCTGTGGAAAGCAAGGTTAAGTGGGTATG...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCATCCACAGCAATTAGTTaGGCTTCATCTCGAACAGCC +
Preference number: 5 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRASTAIS*ASSRTA
Trigger: GGCTGTTCGAGATGAAGCCAAACTAATTGCTGTGGA...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGACTCATAAGCATCTATTaGTGGCACCTCATCACCATC +
Preference number: 5 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRLISIY*WHLITI
Trigger: GATGGTGATGAGGTGCCACAAATAGATGCTTATGAG...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCATTTCTCCAAGATGGTaGGCACAACATGTCCTGCAT +
Preference number: 5 (lower is better)
Translates to: DADREKQSMYKYLCHNDSISPRW*AQHVLH
Trigger: ATGCAGGACATGTTGTGCCAACCATCTTGGAGAAAT...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTCCTCCCCCTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGTTGATCTTATCAAGCTaGAGTTTGTCCACATCAGCT +
Preference number: 5 (lower is better)
Translates to: LLPLAPRHDTYNQFVYTRLILSS*SLSTSA
Trigger: AGCTGATGTGGACAAACTCAAGCTTGATAAGATCAA...CCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAGGGGGAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCTTCCAGGCAGAGGTTaGAATTCCTTCTTATCAGCA +
Preference number: 5 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLELPGRG*NSFLSA
Trigger: TGCTGATAAGAAGGAATTCAAACCTCTGCCTGGAAG...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGACTTCCAGGCAGAGGTTaGAATTCCTTCTTATCAGCA +
Preference number: 5 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRLPGRG*NSFLSA
Trigger: TGCTGATAAGAAGGAATTCAAACCTCTGCCTGGAAG...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGGTGCAGAAATGTCCTTaGTGTCCTTATCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQVQKCP*CPYLLQ
Trigger: CTGCAGGAGATAAGGACACAAAGGACATTTCTGCAC...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCTTCCATCCAGGTTTCTaGGCTAGCATCCTCACTAAT +
Preference number: 5 (lower is better)
Translates to: DADREKQSMYKYLCHNDSFHPGF*ASILTN
Trigger: ATTAGTGAGGATGCTAGCCAAGAAACCTGGATGGAA...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGGACCCTTCAAGGCAGTaGGAAGTTCACCTATATTCG +
Preference number: 5 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQDPSRQ*EVHLYS
Trigger: CGAATATAGGTGAACTTCCAACTGCCTTGAAGGGTC...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGATTTTATTTGAATCATaGAGTCGACCCTTCAAGGCA +
Preference number: 5 (lower is better)
Translates to: LNSSTDSLLEQQDADREKILFES*SRPFKA
Trigger: TGCCTTGAAGGGTCGACTCAATGATTCAAATAAAAT...CTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGCAGGATATTCAGCGTTaGCTGTACCAAGATTTTATT +
Preference number: 5 (lower is better)
Translates to: TLNSSTDSLLEQQDADREQDIQR*LYQDFI
Trigger: AATAAAATCTTGGTACAGCAAACGCTGAATATCCTG...CTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGCTCTGCTTAGAGTTTTaGGATTTGGTTCCTTCCATG +
Preference number: 5 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAELCLEF*DLVPSM
Trigger: CATGGAAGGAACCAAATCCAAAAACTCTAAGCAGAG...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAACCGTTACAATGGTGTaGAGTGCAGCATTGCGTACA +
Preference number: 5 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRATVTMV*SAALRT
Trigger: TGTACGCAATGCTGCACTCAACACCATTGTAACGGT...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACCTTCCACCTGTTTTATaGGTGCAGCAGAGGGTCTCT +
Preference number: 5 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDLPPVL*VQQRVS
Trigger: AGAGACCCTCTGCTGCACCAATAAAACAGGTGGAAG...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAACTCATGCTTCGGGCTaGGTTGAGTTTGGAAGACAT +
Preference number: 5 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRATHASG*VEFGRH
Trigger: ATGTCTTCCAAACTCAACCAAGCCCGAAGCATGAGT...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACCATCGGACTGTACCATaGTCATTCTCAATCTCATCT +
Preference number: 5 (lower is better)
Translates to: AFIQNTVTLQGDREELTNHRTVP*SFSISS
Trigger: AGATGAGATTGAGAATGACAATGGTACAGTCCGATG...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGTGGAAATACGACCTTaGCCCTCCCTCTCCATCTCA +
Preference number: 5 (lower is better)
Translates to: TYNQFVYTRPAEAILNYEVEIRP*PSLSIS
Trigger: TGAGATGGAGAGGGAGGGCAAAGGTCGTATTTCCAC...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACGTCGGTCATCTTGCTTaGTGTTGTCCAGACCACATC +
Preference number: 5 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDVGHLA*CCPDHI
Trigger: GATGTGGTCTGGACAACACAAAGCAAGATGACCGAC...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACGTGGGGCAGCTTCATTaGCGACTGCTCTTTATTCTC +
Preference number: 5 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDVGQLH*RLLFIL
Trigger: GAGAATAAAGAGCAGTCGCAAATGAAGCTGCCCCAC...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGATACATACAACCAGTTaGTATACACTAGGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAEIHTTS*YTLGLL
Trigger: CAGCAGGCCTAGTGTATACAAACTGGTTGTATGTAT...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGAGTATGTACAAATACTaGTGCCACAATGACTCCTCC +
Preference number: 5 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAESMYKY*CHNDSS
Trigger: GGAGGAGTCATTGTGGCACAAGTATTTGTACATACT...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS GCA 90 bp TTTCCAACAACCTTCAGGAAGTCCATGGGGACTCTAAATTGTGAATaGTACTGCATTCTTCTGAGAACCATTCTTCTGAGGGAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: FPTTFRKSMGTLNCE*YCILLRTILLRELL
Trigger: CAGAAGCTCCCTCAGAAGAATGGTTCTCAGAAGAATGCAGTAGCATTCACAATTTAGAGTCCCCATGGACTTCCTGAAGGTTGTTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532321.1
CDS CCA 90 bp TCAGAGCATCCCGAATCCATCTGTAAATCTCCACAGCAATTAGTTTaGCTTCATCTCGAACAGCCTTCTCTCGAGACTCAAAGAGTTTTG +
Preference number: 5 (lower is better)
Translates to: SEHPESICKSPQQLV*LHLEQPSLETQRVL
Trigger: CAAAACTCTTTGAGTCTCGAGAGAAGGCTGTTCGAGATGAAGCCAAACTAATTGCTGTGGAGATTTACAGATGGATTCGGGATGCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS CCA 90 bp CGAATTCCAGAAGAATCTTACCTTGTGTTCACATTTCTGATCAACTaGCAGTTTCAACCACTCACTGTCATCTCCCATTGTGCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: RIPEESYLVFTFLIN*QFQPLTVISHCASR
Trigger: CCTGGAAGCACAATGGGAGATGACAGTGAGTGGTTGAAACTGCCAGTTGATCAGAAATGTGAACACAAGGTAAGATTCTTCTGGAATTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525248.1
CDS-3UTR CAA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGAAGTCTTTGGGAAGTTaGGAAAGGATTTCTACAGCT +
Preference number: 5 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAEKSLGS*ERISTA
Trigger: AGCTGTAGAAATCCTTTCCAAACTTCCCAAAGACTT...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGGAAGATTGCATCAATaGCCTCCTGCAGGGCTTGTA +
Preference number: 5 (lower is better)
Translates to: TYNQFVYTRPAEAILNYEGRLHQ*PPAGLV
Trigger: TACAAGCCCTGCAGGAGGCAATTGATGCAATCTTCC...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGATCAGGAGCAGAATCATaGATGTGCTTAAGTAGTGCA +
Preference number: 5 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRSGAES*MCLSSA
Trigger: TGCACTACTTAAGCACATCAATGATTCTGCTCCTGA...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GACAGTCTTCTAGAGCAGCAGGACGCTGACAGAGAGAAGCAGAGTATGTACAAATTATCAAGCTTGAGTTaGTCCACATCAGCTAGGAAT +
Preference number: 5 (lower is better)
Translates to: DSLLEQQDADREKQSMYKLSSLS*STSARN
Trigger: ATTCCTAGCTGATGTGGACAAACTCAAGCTTGATAA...TTTGTACATACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACTTGATCTTATCAAGCTaGAGTTTGTCCACATCAGCT +
Preference number: 5 (lower is better)
Translates to: AFIQNTVTLQGDREELTNLILSS*SLSTSA
Trigger: AGCTGATGTGGACAAACTCAAGCTTGATAAGATCAA...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGTTCCATCCAGGTTTCTaGGCTAGCATCCTCACTAAT +
Preference number: 5 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQFHPGF*ASILTN
Trigger: ATTAGTGAGGATGCTAGCCAAGAAACCTGGATGGAA...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGATTCACATCTCCAATCTaGTCCACAAGGCCATCTAAT +
Preference number: 5 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRFTSPI*STRPSN
Trigger: ATTAGATGGCCTTGTGGACAAGATTGGAGATGTGAA...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCATTTGTGAGAAAGCCATaGACACAACCTGTTCAGCAG +
Preference number: 5 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRAFVRKP*TQPVQQ
Trigger: CTGCTGAACAGGTTGTGTCAATGGCTTTCTCACAAA...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGTTTGTGAGAAAGCCATaGACACAACCTGTTCAGCAG +
Preference number: 5 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQFVRKP*TQPVQQ
Trigger: CTGCTGAACAGGTTGTGTCAATGGCTTTCTCACAAA...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACAGATCAACGACATCATaGCTCCCGTCATCTGGTTCA +
Preference number: 5 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDRSTTS*LPSSGS
Trigger: TGAACCAGATGACGGGAGCAATGATGTCGTTGATCT...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACTGAGCAGAGAGGGGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGCAGGATATTCAGCGTTaGCTGTACCAAGATTTTATT +
Preference number: 5 (lower is better)
Translates to: TEQRGGSCLQVCTLNSSTQDIQR*LYQDFI
Trigger: AATAAAATCTTGGTACAGCAAACGCTGAATATCCTG...CGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCCCCTCTCTGCTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCATGGCATCTTCTTCCCTaGTGCACTCTTTGCTTTAGA +
Preference number: 5 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRAWHLLP*CTLCFR
Trigger: TCTAAAGCAAAGAGTGCACAAGGGAAGAAGATGCCA...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGAAAATAGGCCCGGATTaGTCTTCATCCTCCTTTAAG +
Preference number: 5 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLEKIGPD*SSSSFK
Trigger: CTTAAAGGAGGATGAAGACAAATCCGGGCCTATTTT...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGAGAGCGGATGACCTGTaGTCCTTCCTCAAGATCTTC +
Preference number: 5 (lower is better)
Translates to: TYNQFVYTRPAEAILNYERADDL*SFLKIF
Trigger: GAAGATCTTGAGGAAGGACAACAGGTCATCCGCTCT...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp AATGAACACAAATCTAGTTGTAGTGTGAGAACCACTGAAGCCCAGCCAATCTCTACAAGCTCTGAGAATTaGGGAGAACTGGCTGTTGCT +
Preference number: 5 (lower is better)
Translates to: NEHKSSCSVRTTEAQPISTSSEN*GELAVA
Trigger: AGCAACAGCCAGTTCTCCCAAATTCTCAGAGCTTGT...AGAGATTGGCTGGGCTTCAGTGGTTCTCACACTACAACTAGATTTGTGTTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CAA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGTGGGGCAGCTTCATTaGCGACTGCTCTTTATTCTC +
Preference number: 5 (lower is better)
Translates to: TYNQFVYTRPAEAILNYEVGQLH*RLLFIL
Trigger: GAGAATAAAGAGCAGTCGCAAATGAAGCTGCCCCAC...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAATACATACAACCAGTTaGTATACACTAGGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRIHTTS*YTLGLL
Trigger: CAGCAGGCCTAGTGTATACAAACTGGTTGTATGTAT...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGATCTGTGTCAGAGCTaGGATACTTGTGTTGATGTC +
Preference number: 5 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRADLCQS*DTCVDV
Trigger: GACATCAACACAAGTATCCAAGCTCTGACACAGATC...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS TCA 90 bp ATAAGACAGATCTCTATGCCCAGCTCCTTGGCTTTAGCTTTAGGTTaGTTGAACACCTTACTTACAACACCTGACACAACTTCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: IRQISMPSSLALALG*LNTLLTTPDTTSPV
Trigger: CACAGGAGAAGTTGTGTCAGGTGTTGTAAGTAAGGTGTTCAATCAACCTAAAGCTAAAGCCAAGGAGCTGGGCATAGAGATCTGTCTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000526496.1
ENST00000529230.6
CDS GCA 90 bp CAAGCTCTTTGGCAGGGTAGAAGCAGTGCAGTGGCGGAAACTTCTTaGAATAAAAAGAGATGTCTGCTGCTTGATGGTTGGATTTTTATT +
Preference number: 5 (lower is better)
Translates to: QALWQGRSSAVAETS*NKKRCLLLDGWIFI
Trigger: AATAAAAATCCAACCATCAAGCAGCAGACATCTCTTTTTATTGCAAGAAGTTTCCGCCACTGCACTGCTTCTACCCTGCCAAAGAGCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGCACTGTCATCTCCCATaGTGCTTCCAGGTTTTCCTT +
Preference number: 5 (lower is better)
Translates to: TYNQFVYTRPAEAILNYEHCHLP*CFQVFL
Trigger: AAGGAAAACCTGGAAGCACAATGGGAGATGACAGTG...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACATCTTGGGATTCTTATaGTCCAAGCCTTTCAGGAGC +
Preference number: 5 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDILGFL*SKPFRS
Trigger: GCTCCTGAAAGGCTTGGACAATAAGAATCCCAAGAT...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CTAGCTCCACGGCATGATACATACAACCAGTTTGTATACACTAGGCCTGCTGAGAGTTTTGGCAACACTTaGATAATTGGCTTAAGCAAG +
Preference number: 5 (lower is better)
Translates to: LAPRHDTYNQFVYTRPAESFGNT*IIGLSK
Trigger: CTTGCTTAAGCCAATTATCAAAGTGTTGCCAAAACT...CTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGTATCATGCCGTGGAGCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GCATTCATACAGAATACAGTGACCCTTCAGGGCGACAGAGAAGAGCTCACAAACAGTTTTGGCAACACTTaGATAATTGGCTTAAGCAAG +
Preference number: 5 (lower is better)
Translates to: AFIQNTVTLQGDREELTNSFGNT*IIGLSK
Trigger: CTTGCTTAAGCCAATTATCAAAGTGTTGCCAAAACT...GTTTGTGAGCTCTTCTCTGTCGCCCTGAAGGGTCACTGTATTCTGTATGAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCTTATCAAGCTTGAGTTaGTCCACATCAGCTAGGAAT +
Preference number: 5 (lower is better)
Translates to: DADREKQSMYKYLCHNDSLSSLS*STSARN
Trigger: ATTCCTAGCTGATGTGGACAAACTCAAGCTTGATAA...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGTTATCAAGCTTGAGTTaGTCCACATCAGCTAGGAAT +
Preference number: 5 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLELSSLS*STSARN
Trigger: ATTCCTAGCTGATGTGGACAAACTCAAGCTTGATAA...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GACGCTGACAGAGAGAAGCAGAGTATGTACAAATACTTGTGCCACAATGACTCCTTGATCTTATCAAGCTaGAGTTTGTCCACATCAGCT +
Preference number: 5 (lower is better)
Translates to: DADREKQSMYKYLCHNDSLILSS*SLSTSA
Trigger: AGCTGATGTGGACAAACTCAAGCTTGATAAGATCAA...GGAGTCATTGTGGCACAAGTATTTGTACATACTCTGCTTCTCTCTGTCAGCGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGTGCAGAAATGTCCTTaGTGTCCTTATCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: TYNQFVYTRPAEAILNYEVQKCP*CPYLLQ
Trigger: CTGCAGGAGATAAGGACACAAAGGACATTTCTGCAC...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp AATGAACACAAATCTAGTTGTAGTGTGAGAACCACTGAAGCCCAGCCAATCTCTTCCTTTAAGCTGGTTTaGCTTGGCATCTTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: NEHKSSCSVRTTEAQPISSFKLV*LGIFFP
Trigger: AGGGAAGAAGATGCCAAGCAAAACCAGCTTAAAGGA...AGAGATTGGCTGGGCTTCAGTGGTTCTCACACTACAACTAGATTTGTGTTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CAA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGACTCATGCTTCGGGCTaGGTTGAGTTTGGAAGACAT +
Preference number: 5 (lower is better)
Translates to: TYNQFVYTRPAEAILNYETHASG*VEFGRH
Trigger: ATGTCTTCCAAACTCAACCAAGCCCGAAGCATGAGT...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGTCTAGGTTAATGCTATaGATGGTATCAGGCAACAGT +
Preference number: 5 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLESRLML*MVSGNS
Trigger: ACTGTTGCCTGATACCATCAATAGCATTAACCTAGA...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGTTTCCTTATCAGACTaGCTCCCAGTCTGGTCCATA +
Preference number: 5 (lower is better)
Translates to: TYNQFVYTRPAEAILNYEVSLSD*LPVWSI
Trigger: TATGGACCAGACTGGGAGCAAGTCTGATAAGGAAAC...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGAGTATGTACAAATACTaGTGCCACAATGACTCCTCC +
Preference number: 5 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQSMYKY*CHNDSS
Trigger: GGAGGAGTCATTGTGGCACAAGTATTTGTACATACT...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GGGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAAACAGCGAAATCATGTaGCCAATGATACAGCTATAC +
Preference number: 5 (lower is better)
Translates to: GQLFTSLYTKLIHGQSSRNSEIM*PMIQLY
Trigger: GTATAGCTGTATCATTGGCAACATGATTTCGCTGTT...TCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS TCA 90 bp CATTTCACATCTCCAATCTTGTCCACAAGGCCATCTAATACAACCTaGGCTGACGTTTTGGAAAAATTTCCCTTCTGGGCAATCAAAGCA +
Preference number: 5 (lower is better)
Translates to: HFTSPILSTRPSNTT*ADVLEKFPFWAIKA
Trigger: TGCTTTGATTGCCCAGAAGGGAAATTTTTCCAAAACGTCAGCTCAGGTTGTATTAGATGGCCTTGTGGACAAGATTGGAGATGTGAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000528593.1
ENST00000529230.6
CDS TCA 90 bp TCCTCTGTCAAACAAATGATTGAGCTCCTAGTTTTGAAATACCACTaGAGTAAGGGAGGCAGTACATGGTGTCAGAGAAGTCACACACAT +
Preference number: 5 (lower is better)
Translates to: SSVKQMIELLVLKYH*SKGGSTWCQRSHTH
Trigger: ATGTGTGTGACTTCTCTGACACCATGTACTGCCTCCCTTACTTCAGTGGTATTTCAAAACTAGGAGCTCAATCATTTGTTTGACAGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533413.5
CDS-3UTR CAA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGGGCTTTAGCTTTAGGTaGATTGAACACCTTACTTAC +
Preference number: 5 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQGFSFR*IEHLTY
Trigger: GTAAGTAAGGTGTTCAATCAACCTAAAGCTAAAGCC...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGCACTTGTTGGCAGTTaGACCCATTCTTCTTCTAGT +
Preference number: 5 (lower is better)
Translates to: TYNQFVYTRPAEAILNYEALVGS*THSSSS
Trigger: ACTAGAAGAAGAATGGGTCAAACTGCCAACAAGTGC...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGCTCATAAGCATCTATTaGTGGCACCTCATCACCATC +
Preference number: 5 (lower is better)
Translates to: TYNQFVYTRPAEAILNYELISIY*WHLITI
Trigger: GATGGTGATGAGGTGCCACAAATAGATGCTTATGAG...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGCAGGGCTTGTACCACTaGAGGTTTCTTCTCTTTGAA +
Preference number: 5 (lower is better)
Translates to: TYNQFVYTRPAEAILNYEQGLYH*RFLLFE
Trigger: TTCAAAGAGAAGAAACCTCAAGTGGTACAAGCCCTG...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGAGAGATGTCTGCTGCTaGATGGTTGGATTTTTATTA +
Preference number: 5 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLERDVCC*MVGFLL
Trigger: TAATAAAAATCCAACCATCAAGCAGCAGACATCTCT...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGTGGCATCTTCTTCCCTaGTGCACTCTTTGCTTTAGA +
Preference number: 5 (lower is better)
Translates to: TYNQFVYTRPAEAILNYEWHLLP*CTLCFR
Trigger: TCTAAAGCAAAGAGTGCACAAGGGAAGAAGATGCCA...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACCATCGGACTGTACCATaGTCATTCTCAATCTCATCT +
Preference number: 5 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDHRTVP*SFSISS
Trigger: AGATGAGATTGAGAATGACAATGGTACAGTCCGATG...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp AGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAGTCTAGGTTAATGCTATaGATGGTATCAGGCAACAGT +
Preference number: 5 (lower is better)
Translates to: SCLQVCTLNSSTDSLLEQSRLML*MVSGNS
Trigger: ACTGTTGCCTGATACCATCAATAGCATTAACCTAGA...CTGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp GGCAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGATGGGAAATTCACTTTaGCATTGCTTCAGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: GSCLQVCTLNSSTDSLLEMGNSL*HCFSFS
Trigger: AGAGAAACTGAAGCAATGCAAAAGTGAATTTCCCAT...CTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGTCAGACTCGTTTTTGTaGTCGATCATCGTTAGGTGG +
Preference number: 5 (lower is better)
Translates to: TYNQFVYTRPAEAILNYESDSFL*SIIVRW
Trigger: CCACCTAACGATGATCGACAACAAAAACGAGTCTGA...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGAGCTCAGACTCGTTTTaGTTGTCGATCATCGTTAGG +
Preference number: 5 (lower is better)
Translates to: TYNQFVYTRPAEAILNYESSDSF*LSIIVR
Trigger: CCTAACGATGATCGACAACAAAAACGAGTCTGAGCT...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACATACATACAACCAGTTaGTATACACTAGGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDIHTTS*YTLGLL
Trigger: CAGCAGGCCTAGTGTATACAAACTGGTTGTATGTAT...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACATGCCCAAGAGCTTCTaGAAACGACTGGTGATAATT +
Preference number: 5 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDMPKSF*KRLVII
Trigger: AATTATCACCAGTCGTTTCAAGAAGCTCTTGGGCAT...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS TCA 90 bp CTGAAAATCGAATTCCAGAAGAATCTTACCTTGTGTTCACATTTCTaGTCAACTGGCAGTTTCAACCACTCACTGTCATCTCCCATTGTG +
Preference number: 5 (lower is better)
Translates to: LKIEFQKNLTLCSHF*STGSFNHSLSSPIV
Trigger: CACAATGGGAGATGACAGTGAGTGGTTGAAACTGCCAGTTGATCAGAAATGTGAACACAAGGTAAGATTCTTCTGGAATTCGATTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525248.1
CDS CCA 90 bp TTTGGCTTCATCTCGAACAGCCTTCTCTCGAGACTCAAAGAGTTTTaGCAACACTTTGATAATTGGCTTAAGCAAGATGATTTTGGAACC +
Preference number: 5 (lower is better)
Translates to: FGFISNSLLSRLKEF*QHFDNWLKQDDFGT
Trigger: GGTTCCAAAATCATCTTGCTTAAGCCAATTATCAAAGTGTTGCCAAAACTCTTTGAGTCTCGAGAGAAGGCTGTTCGAGATGAAGCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS CCA 90 bp TTGAGTCGACCCTTCAAGGCAGTTGGAAGTTCACCTATATTCGGTTaGATAAATTTTGCGTCATTAATAATACCTGCCACTTCATCTAGG +
Preference number: 5 (lower is better)
Translates to: LSRPFKAVGSSPIFG*INFASLIIPATSSR
Trigger: CCTAGATGAAGTGGCAGGTATTATTAATGACGCAAAATTTATCCAACCGAATATAGGTGAACTTCCAACTGCCTTGAAGGGTCGACTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGTCAGGAGCAGAATCATaGATGTGCTTAAGTAGTGCA +
Preference number: 5 (lower is better)
Translates to: TYNQFVYTRPAEAILNYESGAES*MCLSSA
Trigger: TGCACTACTTAAGCACATCAATGATTCTGCTCCTGA...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp CAGCTGTTTACAAGTCTGTACACTAAACTCATCCACGGACAGTCTTCTAGAGCAATTTTATTTGAATCATaGAGTCGACCCTTCAAGGCA +
Preference number: 5 (lower is better)
Translates to: QLFTSLYTKLIHGQSSRAILFES*SRPFKA
Trigger: TGCCTTGAAGGGTCGACTCAATGATTCAAATAAAAT...TGCTCTAGAAGACTGTCCGTGGATGAGTTTAGTGTACAGACTTGTAAACAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGCTCTGCTTAGAGTTTTaGGATTTGGTTCCTTCCATG +
Preference number: 5 (lower is better)
Translates to: TYNQFVYTRPAEAILNYELCLEF*DLVPSM
Trigger: CATGGAAGGAACCAAATCCAAAAACTCTAAGCAGAG...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS TCA 90 bp ATGCTCATATCCTTTTCAGAAAGATTTCCAATCAGTTTGAACACCTaGTCCCCATGTACATTGTACACCGTTACAATGGTGTTGAGTGCA +
Preference number: 5 (lower is better)
Translates to: MLISFSERFPISLNT*SPCTLYTVTMVLSA
Trigger: TGCACTCAACACCATTGTAACGGTGTACAATGTACATGGGGATCAGGTGTTCAAACTGATTGGAAATCTTTCTGAAAAGGATATGAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
ENST00000533413.5
CDS-3UTR CAA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGGCTTTAGCTTTAGGTaGATTGAACACCTTACTTAC +
Preference number: 5 (lower is better)
Translates to: TYNQFVYTRPAEAILNYEGFSFR*IEHLTY
Trigger: GTAAGTAAGGTGTTCAATCAACCTAAAGCTAAAGCC...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACATAGCTTCTTTTGCATaGTTCCCACATTTCACATCT +
Preference number: 5 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDIASFA*FPHFTS
Trigger: AGATGTGAAATGTGGGAACAATGCAAAAGAAGCTAT...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp AATGAACACAAATCTAGTTGTAGTGTGAGAACCACTGAAGCCCAGCCAATCTCTATAGCTTCTTTTGCATaGTTCCCACATTTCACATCT +
Preference number: 5 (lower is better)
Translates to: NEHKSSCSVRTTEAQPISIASFA*FPHFTS
Trigger: AGATGTGAAATGTGGGAACAATGCAAAAGAAGCTAT...AGAGATTGGCTGGGCTTCAGTGGTTCTCACACTACAACTAGATTTGTGTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CAA 90 bp AATGAACACAAATCTAGTTGTAGTGTGAGAACCACTGAAGCCCAGCCAATCTCTATTTTATTTGAATCATaGAGTCGACCCTTCAAGGCA +
Preference number: 5 (lower is better)
Translates to: NEHKSSCSVRTTEAQPISILFES*SRPFKA
Trigger: TGCCTTGAAGGGTCGACTCAATGATTCAAATAAAAT...AGAGATTGGCTGGGCTTCAGTGGTTCTCACACTACAACTAGATTTGTGTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529230.6
CDS-3UTR CAA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACCAGGATATTCAGCGTTaGCTGTACCAAGATTTTATT +
Preference number: 5 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDQDIQR*LYQDFI
Trigger: AATAAAATCTTGGTACAGCAAACGCTGAATATCCTG...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp TACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGGACATGGGAAATTCACTTTaGCATTGCTTCAGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: YNQFVYTRPAEAILNYEDMGNSL*HCFSFS
Trigger: AGAGAAACTGAAGCAATGCAAAAGTGAATTTCCCAT...GTCCTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS-3UTR CAA 90 bp ACATACAACCAGTTTGTATACACTAGGCCTGCTGAGGCCATTTTAAACTATGAGATAGCTTCTTTTGCATaGTTCCCACATTTCACATCT +
Preference number: 5 (lower is better)
Translates to: TYNQFVYTRPAEAILNYEIASFA*FPHFTS
Trigger: AGATGTGAAATGTGGGAACAATGCAAAAGAAGCTAT...CTCATAGTTTAAAATGGCCTCAGCAGGCCTAGTGTATACAAACTGGTTGTATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS CAA 72 bp AGCTGGGTCAGAACCAAGCGGCCTGCTCTAAGCCGTTaGAAACCGCTTGGGCCGCCGCACACCCCGCAGTGT +
Preference number: 6 (lower is better)
Translates to: SWVRTKRPALSR*KPLGPPHTPQC
Trigger: ACACTGCGGGGTGTGCGGCGGCCCAAGCGGTTTCAAACGGCTTAGAGCAGGCCGCTTGGTTCTGACCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312055.9
ENST00000525248.1
CDS GCA 72 bp CCAGGTTTTCCTCAGCTGGGTCAGAACCAAGCGGCCTaGTCTAAGCCGTTTGAAACCGCTTGGGCCGCCGCA +
Preference number: 6 (lower is better)
Translates to: PGFPQLGQNQAA*SKPFETAWAAA
Trigger: TGCGGCGGCCCAAGCGGTTTCAAACGGCTTAGAGCAGGCCGCTTGGTTCTGACCCAGCTGAGGAAAACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525248.1
CDS CCA 72 bp AACCAAGCGGCCTGCTCTAAGCCGTTTGAAACCGCTTaGGCCGCCGCACACCCCGCAGTGTCCTCGTTCTTT +
Preference number: 6 (lower is better)
Translates to: NQAACSKPFETA*AAAHPAVSSFF
Trigger: AAAGAACGAGGACACTGCGGGGTGTGCGGCGGCCCAAGCGGTTTCAAACGGCTTAGAGCAGGCCGCTTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312055.9
CDS CAA 90 bp TATTTCCTCAGCTGGGTCAGAACCAAGCGGCCTGCTCTAAGCCGTTaGAAACCGCTTGGGCCGCCGCACACCCCGCAGTGTCCTCGTTCT +
Preference number: 6 (lower is better)
Translates to: YFLSWVRTKRPALSR*KPLGPPHTPQCPRS
Trigger: AGAACGAGGACACTGCGGGGTGTGCGGCGGCCCAAGCGGTTTCAAACGGCTTAGAGCAGGCCGCTTGGTTCTGACCCAGCTGAGGAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312055.9
CDS GCA 72 bp AGAGTATTTCCTCAGCTGGGTCAGAACCAAGCGGCCTaGTCTAAGCCGTTTGAAACCGCTTGGGCCGCCGCA +
Preference number: 6 (lower is better)
Translates to: RVFPQLGQNQAA*SKPFETAWAAA
Trigger: TGCGGCGGCCCAAGCGGTTTCAAACGGCTTAGAGCAGGCCGCTTGGTTCTGACCCAGCTGAGGAAATACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312055.9
CDS CCA 72 bp TCATCTAGATCCAGCTGGAATTCTCGGCGGACCATCTaGGCTGCCTCAGGATGCCCACTCATGCTTCGGGCT +
Preference number: 6 (lower is better)
Translates to: SSRSSWNSRRTI*AASGCPLMLRA
Trigger: AGCCCGAAGCATGAGTGGGCATCCTGAGGCAGCCCAGATGGTCCGCCGAGAATTCCAGCTGGATCTAGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000526876.2
ENST00000527333.5
ENST00000529230.6
ENST00000533413.5
CDS GCA 72 bp TGGAATTCTCGGCGGACCATCTGGGCTGCCTCAGGATaGCCACTCATGCTTCGGGCTTGGTTGAGTTTGGAA +
Preference number: 6 (lower is better)
Translates to: WNSRRTIWAASG*PLMLRAWLSLE
Trigger: TTCCAAACTCAACCAAGCCCGAAGCATGAGTGGGCATCCTGAGGCAGCCCAGATGGTCCGCCGAGAATTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
ENST00000533413.5
CDS TCA 72 bp CCAGCCTGCCTCGGACCTGCTTGTGACTACCCTCCCTaGACTGCACAGAAGAAAAGGAGCAGTACCTTTGTG +
Preference number: 6 (lower is better)
Translates to: PACLGPACDYPP*TAQKKRSSTFV
Trigger: CACAAAGGTACTGCTCCTTTTCTTCTGTGCAGTTCAGGGAGGGTAGTCACAAGCAGGTCCGAGGCAGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS CCA 72 bp CAGATGGCCCCACTTCTTCCCCATTTGTGTTACCTATaGAGGACACTGTGCTTGTGGGCGTGGGCACACATG +
Preference number: 6 (lower is better)
Translates to: QMAPLLPHLCYL*RTLCLWAWAHM
Trigger: CATGTGTGCCCACGCCCACAAGCACAGTGTCCTCCATAGGTAACACAAATGGGGAAGAAGTGGGGCCATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000525896.1
ENST00000529230.6
ENST00000533413.5
CDS GCA 72 bp TCCTTATCAGACTTGCTCCCAGTCTGGTCCATACTGTaGTTCATCATCCGGCAGAGATGGGCCTCCAGCTCA +
Preference number: 6 (lower is better)
Translates to: SLSDLLPVWSIL*FIIRQRWASSS
Trigger: TGAGCTGGAGGCCCATCTCTGCCGGATGATGAAGCACAGTATGGACCAGACTGGGAGCAAGTCTGATAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000525896.1
ENST00000529230.6
ENST00000533413.5
CDS CCA 72 bp TGCAGGCTGGAATTTGGCTGGAGCGGACCCTCCCATTaGTTTAGAAGTTGCTTTAGTGGGTGGAGCAGGCTT +
Preference number: 6 (lower is better)
Translates to: CRLEFGWSGPSH*FRSCFSGWSRL
Trigger: AAGCCTGCTCCACCCACTAAAGCAACTTCTAAACCAATGGGAGGGTCCGCTCCAGCCAAATTCCAGCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000526943.1
ENST00000529230.6
ENST00000533413.5
CDS CCA 72 bp GTCTGGTCCATACTGTGCTTCATCATCCGGCAGAGATaGGCCTCCAGCTCAGACTCGTTTTTGTTGTCGATC +
Preference number: 6 (lower is better)
Translates to: VWSILCFIIRQR*ASSSDSFLLSI
Trigger: GATCGACAACAAAAACGAGTCTGAGCTGGAGGCCCATCTCTGCCGGATGATGAAGCACAGTATGGACCAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000525896.1
ENST00000529230.6
ENST00000533413.5
CDS CAA 90 bp AGCTCAGGCTCCACTATTTCTTTAGTCTCCAGTCCTTTCTTGTTCTaGGTTCCAGTATTCCCTGCGCCTCCTGGTGCAGCTGGTTTCCCC +
Preference number: 6 (lower is better)
Translates to: SSGSTISLVSSPFLF*VPVFPAPPGAAGFP
Trigger: GGGGAAACCAGCTGCACCAGGAGGCGCAGGGAATACTGGAACCAAGAACAAGAAAGGACTGGAGACTAAAGAAATAGTGGAGCCTGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS CAA 90 bp CTGTGGAGCATGTCTGTGGAAGAGGCGACAGTAGGAACTGCTGGTTaGGAGAGCAAAGAGGTCAAAGGAGGTCGGTCATCTTGCTTTGTG +
Preference number: 6 (lower is better)
Translates to: LWSMSVEEATVGTAG*ESKEVKGGRSSCFV
Trigger: CACAAAGCAAGATGACCGACCTCCTTTGACCTCTTTGCTCTCCAAACCAGCAGTTCCTACTGTCGCCTCTTCCACAGACATGCTCCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
ENST00000533413.5
CDS TCA 72 bp CCAGAACCTTCACCACCAAGAGGTTCACAGAGCGGATaGCCTGTTGTCCTTCCTCAAGATCTTCAATCCGAG +
Preference number: 6 (lower is better)
Translates to: PEPSPPRGSQSG*PVVLPQDLQSE
Trigger: CTCGGATTGAAGATCTTGAGGAAGGACAACAGGTCATCCGCTCTGTGAACCTCTTGGTGGTGAAGGTTCTGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
ENST00000533413.5
CDS CCA 72 bp GACCAACATACAGATACATCACGCCAAGCAGGGTTATaGCAGCAGTCCTCACAGCTGGGTTTGTTGCAGCAA +
Preference number: 6 (lower is better)
Translates to: DQHTDTSRQAGL*QQSSQLGLLQQ
Trigger: TTGCTGCAACAAACCCAGCTGTGAGGACTGCTGCCATAACCCTGCTTGGCGTGATGTATCTGTATGTTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS CCA 72 bp GGTTCCTTCCATGATAAAGGGAAACATCTTGCTAGCTaGGTAGACAAGGCACATCCGGTTCAGGATGGCACG +
Preference number: 6 (lower is better)
Translates to: GSFHDKGKHLAS*VDKAHPVQDGT
Trigger: CGTGCCATCCTGAACCGGATGTGCCTTGTCTACCCAGCTAGCAAGATGTTTCCCTTTATCATGGAAGGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
ENST00000533413.5
CDS CCA 72 bp GTACCATTGTCATTCTCAATCTCATCTAGATCCAGCTaGAATTCTCGGCGGACCATCTGGGCTGCCTCAGGA +
Preference number: 6 (lower is better)
Translates to: VPLSFSISSRSS*NSRRTIWAASG
Trigger: TCCTGAGGCAGCCCAGATGGTCCGCCGAGAATTCCAGCTGGATCTAGATGAGATTGAGAATGACAATGGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000526876.2
ENST00000527333.5
ENST00000529230.6
ENST00000533413.5
CDS CAA 90 bp GACCCTCCCATTGGTTTAGAAGTTGCTTTAGTGGGTGGAGCAGGCTaGGCTGGCATGTTAACTTTGGCTTTCTCTAGCATGGCCAATACC +
Preference number: 6 (lower is better)
Translates to: DPPIGLEVALVGGAG*AGMLTLAFSSMANT
Trigger: GGTATTGGCCATGCTAGAGAAAGCCAAAGTTAACATGCCAGCCAAGCCTGCTCCACCCACTAAAGCAACTTCTAAACCAATGGGAGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000526943.1
ENST00000529230.6
ENST00000533413.5
CDS CAA 90 bp GTGACTACCCTCCCTGAACTGCACAGAAGAAAAGGAGCAGTACCTTaGTGTTGTCCAGACCACATCGCTGTCGGAGGATCTTTAGCCTTT +
Preference number: 6 (lower is better)
Translates to: VTTLPELHRRKGAVP*CCPDHIAVGGSLAF
Trigger: AAAGGCTAAAGATCCTCCGACAGCGATGTGGTCTGGACAACACAAAGGTACTGCTCCTTTTCTTCTGTGCAGTTCAGGGAGGGTAGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525896.1
CDS TCA 72 bp CACCTGTTTTATTGGTGCAGCAGAGGGTCTCTTTGCTaGCCGCTTAATCCTCTCCTCGAGCATGCTCATATC +
Preference number: 6 (lower is better)
Translates to: HLFYWCSRGSLC*PLNPLLEHAHI
Trigger: GATATGAGCATGCTCGAGGAGAGGATTAAGCGGTCAGCAAAGAGACCCTCTGCTGCACCAATAAAACAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
ENST00000533413.5
CDS GCA 72 bp TGCTTTCTCGCCAACCACCTTCAAAGCAGTACCCAATaGTTCAAATGCGGCATCTCTGACTTCAGGAGCAGA +
Preference number: 6 (lower is better)
Translates to: CFLANHLQSSTQ*FKCGISDFRSR
Trigger: TCTGCTCCTGAAGTCAGAGATGCCGCATTTGAAGCATTGGGTACTGCTTTGAAGGTGGTTGGCGAGAAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS CCA 72 bp TGTCCTCAGCTGGTCCCTTGCGTAACATGTTGGCATTaGAGCTTATGTTCTGTGCACGCTGAGGTTTCTCTT +
Preference number: 6 (lower is better)
Translates to: CPQLVPCVTCWH*SLCSVHAEVSL
Trigger: AAGAGAAACCTCAGCGTGCACAGAACATAAGCTCCAATGCCAACATGTTACGCAAGGGACCAGCTGAGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
ENST00000533413.5
CDS CAA 72 bp CTGATCTCCGTCCTCGGCAAAAGATCAACGACATCATaGCTCCCGTCATCTGGTTCATCTCCATCTTCTCCT +
Preference number: 6 (lower is better)
Translates to: LISVLGKRSTTS*LPSSGSSPSSP
Trigger: AGGAGAAGATGGAGATGAACCAGATGACGGGAGCAATGATGTCGTTGATCTTTTGCCGAGGACGGAGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS CAA 72 bp ATACAATCTTCAGCAGGTGCTGATGCAGGCTGGAATTaGGCTGGAGCGGACCCTCCCATTGGTTTAGAAGTT +
Preference number: 6 (lower is better)
Translates to: IQSSAGADAGWN*AGADPPIGLEV
Trigger: AACTTCTAAACCAATGGGAGGGTCCGCTCCAGCCAAATTCCAGCCTGCATCAGCACCTGCTGAAGATTGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000526943.1
ENST00000529230.6
ENST00000533413.5
CDS TCA 72 bp GATCCCCATGTACATTGTACACCGTTACAATGGTGTTaGGTGCAGCATTGCGTACAGCATTGTCACGGTCTC +
Preference number: 6 (lower is better)
Translates to: DPHVHCTPLQWC*VQHCVQHCHGL
Trigger: GAGACCGTGACAATGCTGTACGCAATGCTGCACTCAACACCATTGTAACGGTGTACAATGTACATGGGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
ENST00000533413.5
CDS GCA 72 bp TCAATCCGAGAATCCAGCATTAAGGTGATGAGGCCATaGATTAGGTCTTTTAGTACTCCAGTGGAGGCCTCC +
Preference number: 6 (lower is better)
Translates to: SIRESSIKVMRP*IRSFSTPVEAS
Trigger: GGAGGCCTCCACTGGAGTACTAAAAGACCTAATGCATGGCCTCATCACCTTAATGCTGGATTCTCGGATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
ENST00000533413.5
CDS CCA 72 bp CATCTGTACCACTTGTGCTATGCTTGGAAATTCCTCTaGTTGGAGCAGGTGGACTTTGTCCCTGCATCTTCT +
Preference number: 6 (lower is better)
Translates to: HLYHLCYAWKFL*LEQVDFVPASS
Trigger: AGAAGATGCAGGGACAAAGTCCACCTGCTCCAACCAGAGGAATTTCCAAGCATAGCACAAGTGGTACAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS CAA 72 bp TCCACTATTTCTTTAGTCTCCAGTCCTTTCTTGTTCTaGGTTCCAGTATTCCCTGCGCCTCCTGGTGCAGCT +
Preference number: 6 (lower is better)
Translates to: STISLVSSPFLF*VPVFPAPPGAA
Trigger: AGCTGCACCAGGAGGCGCAGGGAATACTGGAACCAAGAACAAGAAAGGACTGGAGACTAAAGAAATAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS CAA 90 bp CTCCTTCATCTGTACCACTTGTGCTATGCTTGGAAATTCCTCTGGTaGGAGCAGGTGGACTTTGTCCCTGCATCTTCTCAAATTCTGCAT +
Preference number: 6 (lower is better)
Translates to: LLHLYHLCYAWKFLW*EQVDFVPASSQILH
Trigger: ATGCAGAATTTGAGAAGATGCAGGGACAAAGTCCACCTGCTCCAACCAGAGGAATTTCCAAGCATAGCACAAGTGGTACAGATGAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS GCA 72 bp GCCAACCACCTTCAAAGCAGTACCCAATGCTTCAAATaGGGCATCTCTGACTTCAGGAGCAGAATCATTGAT +
Preference number: 6 (lower is better)
Translates to: ANHLQSSTQCFK*GISDFRSRIID
Trigger: ATCAATGATTCTGCTCCTGAAGTCAGAGATGCCGCATTTGAAGCATTGGGTACTGCTTTGAAGGTGGTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS GCA 72 bp CCCATGTACATTGTACACCGTTACAATGGTGTTGAGTaGAGCATTGCGTACAGCATTGTCACGGTCTCCTAT +
Preference number: 6 (lower is better)
Translates to: PMYIVHRYNGVE*SIAYSIVTVSY
Trigger: ATAGGAGACCGTGACAATGCTGTACGCAATGCTGCACTCAACACCATTGTAACGGTGTACAATGTACATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
ENST00000533413.5
CDS CCA 72 bp TGTGCTATGCTTGGAAATTCCTCTGGTTGGAGCAGGTaGACTTTGTCCCTGCATCTTCTCAAATTCTGCATC +
Preference number: 6 (lower is better)
Translates to: CAMLGNSSGWSR*TLSLHLLKFCI
Trigger: GATGCAGAATTTGAGAAGATGCAGGGACAAAGTCCACCTGCTCCAACCAGAGGAATTTCCAAGCATAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS CCA 72 bp CATCTTCTCCTTCATCTGTACCACTTGTGCTATGCTTaGAAATTCCTCTGGTTGGAGCAGGTGGACTTTGTC +
Preference number: 6 (lower is better)
Translates to: HLLLHLYHLCYA*KFLWLEQVDFV
Trigger: GACAAAGTCCACCTGCTCCAACCAGAGGAATTTCCAAGCATAGCACAAGTGGTACAGATGAAGGAGAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS CCA 72 bp TGTGGATGCTGTATTACTGTGCATGTCATCGAAGTGTaGAGAAACAGCCCGGATCTTGGGTTCAGGAATAAG +
Preference number: 6 (lower is better)
Translates to: CGCCITVHVIEV*RNSPDLGFRNK
Trigger: CTTATTCCTGAACCCAAGATCCGGGCTGTTTCTCCACACTTCGATGACATGCACAGTAATACAGCATCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000526876.2
ENST00000527333.5
ENST00000529230.6
ENST00000533413.5
CDS CAA 72 bp CCATCTTCTCCTTCATCTGTACCACTTGTGCTATGCTaGGAAATTCCTCTGGTTGGAGCAGGTGGACTTTGT +
Preference number: 6 (lower is better)
Translates to: PSSPSSVPLVLC*EIPLVGAGGLC
Trigger: ACAAAGTCCACCTGCTCCAACCAGAGGAATTTCCAAGCATAGCACAAGTGGTACAGATGAAGGAGAAGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS CAA 72 bp TGGTTGAGTTTGGAAGACATGTCCTCAGCTGGTCCCTaGCGTAACATGTTGGCATTGGAGCTTATGTTCTGT +
Preference number: 6 (lower is better)
Translates to: WLSLEDMSSAGP*RNMLALELMFC
Trigger: ACAGAACATAAGCTCCAATGCCAACATGTTACGCAAGGGACCAGCTGAGGACATGTCTTCCAAACTCAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
ENST00000533413.5
CDS CAA 72 bp ATTCTCCAGAGACACTTCATAACAAGCTCTGAGAATTaGGGAGAACTGGCTGTTGCTAGCAGGCTGTCTTGG +
Preference number: 6 (lower is better)
Translates to: ILQRHFITSSEN*GELAVASRLSW
Trigger: CCAAGACAGCCTGCTAGCAACAGCCAGTTCTCCCAAATTCTCAGAGCTTGTTATGAAGTGTCTCTGGAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
ENST00000533413.5
CDS CCA 72 bp CCCGAATCCATCTGTAAATCTCCACAGCAATTAGTTTaGCTTCATCTCGAACAGCCTTCTCTCGAGACTCAA +
Preference number: 6 (lower is better)
Translates to: PESICKSPQQLV*LHLEQPSLETQ
Trigger: TTGAGTCTCGAGAGAAGGCTGTTCGAGATGAAGCCAAACTAATTGCTGTGGAGATTTACAGATGGATTCGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS CCA 72 bp TTTAGCAAGCTCTTTGGCAGGGTAGAAGCAGTGCAGTaGCGGAAACTTCTTGCAATAAAAAGAGATGTCTGC +
Preference number: 6 (lower is better)
Translates to: FSKLFGRVEAVQ*RKLLAIKRDVC
Trigger: GCAGACATCTCTTTTTATTGCAAGAAGTTTCCGCCACTGCACTGCTTCTACCCTGCCAAAGAGCTTGCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS CAA 72 bp GCTTTCCTCAGTGTCTCTATACAGGCCACTATGATCTaGGGATTCTTATTGTCCAAGCCTTTCAGGAGCTCT +
Preference number: 6 (lower is better)
Translates to: AFLSVSIQATMI*GFLLSKPFRSS
Trigger: AGAGCTCCTGAAAGGCTTGGACAATAAGAATCCCAAGATCATAGTGGCCTGTATAGAGACACTGAGGAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000526496.1
ENST00000529230.6
CDS CAA 90 bp AGTAAGGAAGATTGCATCAATTGCCTCCTGCAGGGCTTGTACCACTaGAGGTTTCTTCTCTTTGAATTTCTCCAAGATGGTTGGCACAAC +
Preference number: 6 (lower is better)
Translates to: SKEDCINCLLQGLYH*RFLLFEFLQDGWHN
Trigger: GTTGTGCCAACCATCTTGGAGAAATTCAAAGAGAAGAAACCTCAAGTGGTACAAGCCCTGCAGGAGGCAATTGATGCAATCTTCCTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
ENST00000532321.1
CDS CAA 90 bp GGTAACATACAGGCTTCGGCTATTGCTGTCATAGCTTCTTTTGCATaGTTCCCACATTTCACATCTCCAATCTTGTCCACAAGGCCATCT +
Preference number: 6 (lower is better)
Translates to: GNIQASAIAVIASFA*FPHFTSPILSTRPS
Trigger: AGATGGCCTTGTGGACAAGATTGGAGATGTGAAATGTGGGAACAATGCAAAAGAAGCTATGACAGCAATAGCCGAAGCCTGTATGTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000528593.1
ENST00000529230.6
CDS CAA 90 bp ATTTTATCACTGATCTCCGTCCTCGGCAAAAGATCAACGACATCATaGCTCCCGTCATCTGGTTCATCTCCATCTTCTCCTTCATCTGTA +
Preference number: 6 (lower is better)
Translates to: ILSLISVLGKRSTTS*LPSSGSSPSSPSSV
Trigger: TACAGATGAAGGAGAAGATGGAGATGAACCAGATGACGGGAGCAATGATGTCGTTGATCTTTTGCCGAGGACGGAGATCAGTGATAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS TCA 72 bp TCTCCAATCTTGTCCACAAGGCCATCTAATACAACCTaGGCTGACGTTTTGGAAAAATTTCCCTTCTGGGCA +
Preference number: 6 (lower is better)
Translates to: SPILSTRPSNTT*ADVLEKFPFWA
Trigger: TGCCCAGAAGGGAAATTTTTCCAAAACGTCAGCTCAGGTTGTATTAGATGGCCTTGTGGACAAGATTGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000528593.1
ENST00000529230.6
CDS TCA 72 bp CCGAAGGCCTCTTTCGACATAGCTCTGGAAGAACTGTaGGGAATTTTTCAGAAATGGTTCAATGTCAGCATC +
Preference number: 6 (lower is better)
Translates to: PKASFDIALEEL*GIFQKWFNVSI
Trigger: GATGCTGACATTGAACCATTTCTGAAAAATTCCTCACAGTTCTTCCAGAGCTATGTCGAAAGAGGCCTTCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000525896.1
ENST00000529230.6
ENST00000533413.5
CDS GCA 72 bp AGGAAGTCCATGGGGACTCTAAATTGTGAATGCTACTaGATTCTTCTGAGAACCATTCTTCTGAGGGAGCTT +
Preference number: 6 (lower is better)
Translates to: RKSMGTLNCECY*ILLRTILLREL
Trigger: AAGCTCCCTCAGAAGAATGGTTCTCAGAAGAATGCAGTAGCATTCACAATTTAGAGTCCCCATGGACTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532321.1
CDS GCA 72 bp ACCTTCAGGAAGTCCATGGGGACTCTAAATTGTGAATaGTACTGCATTCTTCTGAGAACCATTCTTCTGAGG +
Preference number: 6 (lower is better)
Translates to: TFRKSMGTLNCE*YCILLRTILLR
Trigger: CCTCAGAAGAATGGTTCTCAGAAGAATGCAGTAGCATTCACAATTTAGAGTCCCCATGGACTTCCTGAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532321.1
CDS CCA 72 bp TGCTTTCCACAGCTTGTGTTCACATTTCTGATCAACTaGCAGTTTCAACCACTCACTGTCATCTCCCATTGT +
Preference number: 6 (lower is better)
Translates to: CFPQLVFTFLIN*QFQPLTVISHC
Trigger: ACAATGGGAGATGACAGTGAGTGGTTGAAACTGCCAGTTGATCAGAAATGTGAACACAAGCTGTGGAAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000526496.1
ENST00000529230.6
CDS CAA 72 bp GATTGCATCAATTGCCTCCTGCAGGGCTTGTACCACTaGAGGTTTCTTCTCTTTGAATTTCTCCAAGATGGT +
Preference number: 6 (lower is better)
Translates to: DCINCLLQGLYH*RFLLFEFLQDG
Trigger: ACCATCTTGGAGAAATTCAAAGAGAAGAAACCTCAAGTGGTACAAGCCCTGCAGGAGGCAATTGATGCAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
ENST00000532321.1
CDS CAA 72 bp CAGGCTTCGGCTATTGCTGTCATAGCTTCTTTTGCATaGTTCCCACATTTCACATCTCCAATCTTGTCCACA +
Preference number: 6 (lower is better)
Translates to: QASAIAVIASFA*FPHFTSPILST
Trigger: TGTGGACAAGATTGGAGATGTGAAATGTGGGAACAATGCAAAAGAAGCTATGACAGCAATAGCCGAAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000528593.1
ENST00000529230.6
CDS CAA 72 bp ATGTTGCTTAATATTTGGGCCCATGGCTACTGCCAGTaGTTGCAGGATATTCAGCGTTTGCTGTACCAAGAT +
Preference number: 6 (lower is better)
Translates to: MLLNIWAHGYCQ*LQDIQRLLYQD
Trigger: ATCTTGGTACAGCAAACGCTGAATATCCTGCAACAACTGGCAGTAGCCATGGGCCCAAATATTAAGCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS TCA 72 bp CTTAACCTTGCTTTCCACAGCTTGTGTTCACATTTCTaGTCAACTGGCAGTTTCAACCACTCACTGTCATCT +
Preference number: 6 (lower is better)
Translates to: LNLAFHSLCSHF*STGSFNHSLSS
Trigger: AGATGACAGTGAGTGGTTGAAACTGCCAGTTGATCAGAAATGTGAACACAAGCTGTGGAAAGCAAGGTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000526496.1
ENST00000529230.6
CDS TCA 72 bp ATCTCTATGCCCAGCTCCTTGGCTTTAGCTTTAGGTTaGTTGAACACCTTACTTACAACACCTGACACAACT +
Preference number: 6 (lower is better)
Translates to: ISMPSSLALALG*LNTLLTTPDTT
Trigger: AGTTGTGTCAGGTGTTGTAAGTAAGGTGTTCAATCAACCTAAAGCTAAAGCCAAGGAGCTGGGCATAGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000526496.1
ENST00000529230.6
CDS TCA 72 bp TTAAGGCTTTCCTCAGTGTCTCTATACAGGCCACTATaGTCTTGGGATTCTTATTGTCCAAGCCTTTCAGGA +
Preference number: 6 (lower is better)
Translates to: LRLSSVSLYRPL*SWDSYCPSLSG
Trigger: TCCTGAAAGGCTTGGACAATAAGAATCCCAAGATCATAGTGGCCTGTATAGAGACACTGAGGAAAGCCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS GCA 72 bp TGCTTAATATTTGGGCCCATGGCTACTGCCAGTTGTTaGAGGATATTCAGCGTTTGCTGTACCAAGATTTTA +
Preference number: 6 (lower is better)
Translates to: CLIFGPMATASC*RIFSVCCTKIL
Trigger: TAAAATCTTGGTACAGCAAACGCTGAATATCCTGCAACAACTGGCAGTAGCCATGGGCCCAAATATTAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS CAA 72 bp AGTAAGGAAGATTGCATCAATTGCCTCCTGCAGGGCTaGTACCACTTGAGGTTTCTTCTCTTTGAATTTCTC +
Preference number: 6 (lower is better)
Translates to: SKEDCINCLLQG*YHLRFLLFEFL
Trigger: GAGAAATTCAAAGAGAAGAAACCTCAAGTGGTACAAGCCCTGCAGGAGGCAATTGATGCAATCTTCCTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
ENST00000532321.1
CDS CAA 72 bp TTGCTTAATATTTGGGCCCATGGCTACTGCCAGTTGTaGCAGGATATTCAGCGTTTGCTGTACCAAGATTTT +
Preference number: 6 (lower is better)
Translates to: LLNIWAHGYCQL*QDIQRLLYQDF
Trigger: AAAATCTTGGTACAGCAAACGCTGAATATCCTGCAACAACTGGCAGTAGCCATGGGCCCAAATATTAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS CAA 90 bp ATAAAAATAGGCCCGGATTTGTCTTCATCCTCCTTTAAGCTGGTTTaGCTTGGCATCTTCTTCCCTTGTGCACTCTTTGCTTTAGAGGAT +
Preference number: 6 (lower is better)
Translates to: IKIGPDLSSSSFKLV*LGIFFPCALFALED
Trigger: ATCCTCTAAAGCAAAGAGTGCACAAGGGAAGAAGATGCCAAGCAAAACCAGCTTAAAGGAGGATGAAGACAAATCCGGGCCTATTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000526943.1
ENST00000529230.6
ENST00000533413.5
CDS TCA 72 bp ATGTTAACTTTGGCTTTCTCTAGCATGGCCAATACCTaGTCTTTAGAAGTTGGCTTTAGTTTCCCAGTAGCC +
Preference number: 6 (lower is better)
Translates to: MLTLAFSSMANT*SLEVGFSFPVA
Trigger: GGCTACTGGGAAACTAAAGCCAACTTCTAAAGATCAGGTATTGGCCATGCTAGAGAAAGCCAAAGTTAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS TCA 72 bp ATGTTAACTTTGGCTTTCTCTAGCATGGCCAATACCTaGTCTTTAGAAGTTGGATGGTGTCAGAGAAGTCAC +
Preference number: 6 (lower is better)
Translates to: MLTLAFSSMANT*SLEVGWCQRSH
Trigger: GTGACTTCTCTGACACCATCCAACTTCTAAAGATCAGGTATTGGCCATGCTAGAGAAAGCCAAAGTTAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526943.1
CDS CCA 72 bp GAAGAATCTTACCTTGTGTTCACATTTCTGATCAACTaGCAGTTTCAACCACTCACTGTCATCTCCCATTGT +
Preference number: 6 (lower is better)
Translates to: EESYLVFTFLIN*QFQPLTVISHC
Trigger: ACAATGGGAGATGACAGTGAGTGGTTGAAACTGCCAGTTGATCAGAAATGTGAACACAAGGTAAGATTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525248.1
CDS CAA 72 bp TGGATATCCAGAAGAATTCTGTCTAGGTTAATGCTATaGATGGTATCAGGCAACAGTCGAACCATTCTCCAG +
Preference number: 6 (lower is better)
Translates to: WISRRILSRLML*MVSGNSRTILQ
Trigger: CTGGAGAATGGTTCGACTGTTGCCTGATACCATCAATAGCATTAACCTAGACAGAATTCTTCTGGATATCCA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
ENST00000533413.5
CDS CAA 90 bp ATGAAAATGTGGATATCCAGAAGAATTCTGTCTAGGTTAATGCTATaGATGGTATCAGGCAACAGTCGAACCATTCTCCAGAGACACTTC +
Preference number: 6 (lower is better)
Translates to: MKMWISRRILSRLML*MVSGNSRTILQRHF
Trigger: GAAGTGTCTCTGGAGAATGGTTCGACTGTTGCCTGATACCATCAATAGCATTAACCTAGACAGAATTCTTCTGGATATCCACATTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
ENST00000533413.5
CDS TCA 72 bp TCCTTTTCAGAAAGATTTCCAATCAGTTTGAACACCTaGTCCCCATGTACATTGTACACCGTTACAATGGTG +
Preference number: 6 (lower is better)
Translates to: SFSERFPISLNT*SPCTLYTVTMV
Trigger: CACCATTGTAACGGTGTACAATGTACATGGGGATCAGGTGTTCAAACTGATTGGAAATCTTTCTGAAAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
ENST00000533413.5
CDS TCA 72 bp GAATTCCAGAAGAATCTTACCTTGTGTTCACATTTCTaGTCAACTGGCAGTTTCAACCACTCACTGTCATCT +
Preference number: 6 (lower is better)
Translates to: EFQKNLTLCSHF*STGSFNHSLSS
Trigger: AGATGACAGTGAGTGGTTGAAACTGCCAGTTGATCAGAAATGTGAACACAAGGTAAGATTCTTCTGGAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525248.1
CDS TCA 72 bp AAACAAATGATTGAGCTCCTAGTTTTGAAATACCACTaGAGTAAGGGAGGCAGTACATGGTGTCAGAGAAGT +
Preference number: 6 (lower is better)
Translates to: KQMIELLVLKYH*SKGGSTWCQRS
Trigger: ACTTCTCTGACACCATGTACTGCCTCCCTTACTTCAGTGGTATTTCAAAACTAGGAGCTCAATCATTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533413.5
CDS CAA 72 bp GCCTTCTCTCGAGACTCAAAGAGTTTTGGCAACACTTaGATAATTGGCTTAAGCAAGATGATTTTGGAACCA +
Preference number: 6 (lower is better)
Translates to: AFSRDSKSFGNT*IIGLSKMILEP
Trigger: TGGTTCCAAAATCATCTTGCTTAAGCCAATTATCAAAGTGTTGCCAAAACTCTTTGAGTCTCGAGAGAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS CAA 72 bp GTAAGACATTTTGCTGCCAAAGCCACCAACATGACATaGGTGTCCTTTCCAACAACCTTCTTTAATGCTTTT +
Preference number: 6 (lower is better)
Translates to: VRHFAAKATNMT*VSFPTTFFNAF
Trigger: AAAAGCATTAAAGAAGGTTGTTGGAAAGGACACCAATGTCATGTTGGTGGCTTTGGCAGCAAAATGTCTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6
CDS CAA 90 bp TCTCGAACAGCCTTCTCTCGAGACTCAAAGAGTTTTGGCAACACTTaGATAATTGGCTTAAGCAAGATGATTTTGGAACCAAATTCACTT +
Preference number: 6 (lower is better)
Translates to: SRTAFSRDSKSFGNT*IIGLSKMILEPNSL
Trigger: AAGTGAATTTGGTTCCAAAATCATCTTGCTTAAGCCAATTATCAAAGTGTTGCCAAAACTCTTTGAGTCTCGAGAGAAGGCTGTTCGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312055.9
ENST00000354558.7
ENST00000529230.6