RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CKAP4 (Homo sapiens)

Ensembl gene IDs: ENSG00000136026

Ensembl transcript IDs: ENST00000378026.5, ENST00000552828.5, ENST00000553039.1

Found 179 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGAACCGCCTGGATGCTTTGCATAGTTACCTCTGATATCACAAGATaGGTCAGGAAGAGAAACGACACGCACACCATGAGGGAGGCAGCC +
Preference number: 1 (lower is better)
Translates to: RTAWMLCIVTSDITR*VRKRNDTHTMREAA
Trigger: GGCTGCCTCCCTCATGGTGTGCGTGTCGTTTCTCTTCCTGACGCATCTTGTGATATCAGAGGTAACTATGCAAAGCATCCAGGCGGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
3UTR TCA 90 bp CTGATATCACAAGATGCGTCAGGAAGAGAAACGACACGCACACCATaGGGGAGGCAGCCCTCAAGCAGCGGATTCCTTTCAAAGAAAGAC +
Preference number: 1 (lower is better)
Translates to: LISQDASGRETTRTP*GRQPSSSGFLSKKD
Trigger: GTCTTTCTTTGAAAGGAATCCGCTGCTTGAGGGCTGCCTCCCTCATGGTGTGCGTGTCGTTTCTCTTCCTGACGCATCTTGTGATATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
3UTR GCA 90 bp AAACAATTACACAAACGCAGTATGCACGCTCCTTGCCGACAGGGCTaGCCAGACGGCAAACCTCTTCATGGACATCATGTTAAAATAAAA +
Preference number: 1 (lower is better)
Translates to: KQLHKRSMHAPCRQG*PDGKPLHGHHVKIK
Trigger: TTTTATTTTAACATGATGTCCATGAAGAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTGCGTTTGTGTAATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
3UTR-3UTR TCA 90 bp CTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCTTCATGGACATCATGTTAACGACACGCACACCATaGGGGAGGCAGCCCTCAAGC +
Preference number: 2 (lower is better)
Translates to: LLADRAAQTANLFMDIMLTTRTP*GRQPSS
Trigger: GCTTGAGGGCTGCCTCCCTCATGGTGTGCGTGTCGT...TAACATGATGTCCATGAAGAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
3UTR-3UTR TCA 90 bp AGGGAGGCAGCCCTCAAGCAGCGGATTCCTTTCAAAGAAAGACCCAGGGGCTTCTTGGTGTTCAGGTGGTaGCAACTGCTCTTTAAGAGG +
Preference number: 2 (lower is better)
Translates to: REAALKQRIPFKERPRGFLVFRW*QLLFKR
Trigger: CCTCTTAAAGAGCAGTTGTCACCACCTGAACACCAA...GAAGCCCCTGGGTCTTTCTTTGAAAGGAATCCGCTGCTTGAGGGCTGCCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
3UTR-3UTR GCA 90 bp ATCACAAGATGCGTCAGGAAGAGAAACGACACGCACACCATGAGGGAGGCAGCCTCAGGTGGTGACAACTaGTCTTTAAGAGGGGACAAG +
Preference number: 2 (lower is better)
Translates to: ITRCVRKRNDTHTMREAASGGDN*SLRGDK
Trigger: CTTGTCCCCTCTTAAAGAGCAGTTGTCACCACCTGA...GGCTGCCTCCCTCATGGTGTGCGTGTCGTTTCTCTTCCTGACGCATCTTGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
3UTR-3UTR TCA 90 bp AGATACAGCAAACAATTACACAAACGCAGTATGCACGCTCCTTGCCGACAGGGCCTGTGCATTCCTTGGTaGCCTCCGGAGAGAGAACAT +
Preference number: 2 (lower is better)
Translates to: RYSKQLHKRSMHAPCRQGLCIPW*PPEREH
Trigger: ATGTTCTCTCTCCGGAGGTCACCAAGGAATGCACAG...GCCCTGTCGGCAAGGAGCGTGCATACTGCGTTTGTGTAATTGTTTGCTGTATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
3UTR-3UTR GCA 90 bp CAGTATGCACGCTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCTTCATGGTTTTTACTTGAAATCTaGCAGCCAGACAGGATTTCT +
Preference number: 2 (lower is better)
Translates to: QYARSLPTGLPRRQTSSWFLLEI*QPDRIS
Trigger: AGAAATCCTGTCTGGCTGGCAGATTTCAAGTAAAAA...CCATGAAGAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378026.5
3UTR-3UTR GCA 90 bp TCGAAACCTGTGCATTCCTTGGTGACCTCCGGAGAGAGAACATGGGCCGGCAGTTCTGATATCACAAGATaGGTCAGGAAGAGAAACGAC +
Preference number: 2 (lower is better)
Translates to: SKPVHSLVTSGERTWAGSSDITR*VRKRND
Trigger: GTCGTTTCTCTTCCTGACGCATCTTGTGATATCAGA...ACTGCCGGCCCATGTTCTCTCTCCGGAGGTCACCAAGGAATGCACAGGTTTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
3UTR-3UTR CCA 90 bp CAGTATGCACGCTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCTTCATGGTTAACCGGTTCAAAGTaGAAGACAAGTGAGAGATAT +
Preference number: 2 (lower is better)
Translates to: QYARSLPTGLPRRQTSSWLTGSK*KTSERY
Trigger: ATATCTCTCACTTGTCTTCCACTTTGAACCGGTTAA...CCATGAAGAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
3UTR-3UTR CCA 90 bp CTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCTTCATGGACATCATGTTAGAAAATACAATGCCTTaGTGTTCAGGTGGTGACAAC +
Preference number: 2 (lower is better)
Translates to: LLADRAAQTANLFMDIMLENTMP*CSGGDN
Trigger: GTTGTCACCACCTGAACACCAAGGCATTGTATTTTC...TAACATGATGTCCATGAAGAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
3UTR-3UTR GCA 90 bp GATATCACAAGATGCGTCAGGAAGAGAAACGACACGCACACCATGAGGGAGGCAGGCATGAAAATACAATaGCTTGGTGTTCAGGTGGTG +
Preference number: 2 (lower is better)
Translates to: DITRCVRKRNDTHTMREAGMKIQ*LGVQVV
Trigger: CACCACCTGAACACCAAGGCATTGTATTTTCATGCC...TGCCTCCCTCATGGTGTGCGTGTCGTTTCTCTTCCTGACGCATCTTGTGATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
3UTR-3UTR GCA 90 bp CTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCTTCATGGACATCATGTTAAGGAAACCAACCAAATaGAGAAGCAGAGAACTTAAA +
Preference number: 2 (lower is better)
Translates to: LLADRAAQTANLFMDIMLRKPTK*RSRELK
Trigger: TTTAAGTTCTCTGCTTCTGCATTTGGTTGGTTTCCT...TAACATGATGTCCATGAAGAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
3UTR TCA 72 bp CCCCTTTCTGGTAGTCGAAACCTGTGCATTCCTTGGTaGCCTCCGGAGAGAGAACATGGGCCGGCAGTGGGG +
Preference number: 3 (lower is better)
Translates to: PLSGSRNLCIPW*PPEREHGPAVG
Trigger: CCCCACTGCCGGCCCATGTTCTCTCTCCGGAGGTCACCAAGGAATGCACAGGTTTCGACTACCAGAAAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
3UTR TCA 72 bp CAAGATGCGTCAGGAAGAGAAACGACACGCACACCATaGGGGAGGCAGCCCTCAAGCAGCGGATTCCTTTCA +
Preference number: 3 (lower is better)
Translates to: QDASGRETTRTP*GRQPSSSGFLS
Trigger: TGAAAGGAATCCGCTGCTTGAGGGCTGCCTCCCTCATGGTGTGCGTGTCGTTTCTCTTCCTGACGCATCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
3UTR GCA 72 bp CACAAACGCAGTATGCACGCTCCTTGCCGACAGGGCTaGCCAGACGGCAAACCTCTTCATGGACATCATGTT +
Preference number: 3 (lower is better)
Translates to: HKRSMHAPCRQG*PDGKPLHGHHV
Trigger: AACATGATGTCCATGAAGAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTGCGTTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
3UTR GCA 72 bp AAGGGAGATACAGCAAACAATTACACAAACGCAGTATaGACGCTCCTTGCCGACAGGGCTGCCCAGACGGCA +
Preference number: 3 (lower is better)
Translates to: KGDTANNYTNAV*TLLADRAAQTA
Trigger: TGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTGCGTTTGTGTAATTGTTTGCTGTATCTCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
3UTR GCA 72 bp AGCAAACAATTACACAAACGCAGTATGCACGCTCCTTaGCGACAGGGCTGCCCAGACGGCAAACCTCTTCAT +
Preference number: 3 (lower is better)
Translates to: SKQLHKRSMHAP*RQGCPDGKPLH
Trigger: ATGAAGAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTGCGTTTGTGTAATTGTTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
3UTR GCA 72 bp TGGATGCTTTGCATAGTTACCTCTGATATCACAAGATaGGTCAGGAAGAGAAACGACACGCACACCATGAGG +
Preference number: 3 (lower is better)
Translates to: WMLCIVTSDITR*VRKRNDTHTMR
Trigger: CCTCATGGTGTGCGTGTCGTTTCTCTTCCTGACGCATCTTGTGATATCAGAGGTAACTATGCAAAGCATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
3UTR TCA 72 bp ATTCAGAACCGCCTGGATGCTTTGCATAGTTACCTCTaGTATCACAAGATGCGTCAGGAAGAGAAACGACAC +
Preference number: 3 (lower is better)
Translates to: IQNRLDALHSYL*YHKMRQEEKRH
Trigger: GTGTCGTTTCTCTTCCTGACGCATCTTGTGATATCAGAGGTAACTATGCAAAGCATCCAGGCGGTTCTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
3UTR CCA 72 bp GTAAATAAGTTAACTGGGCATGAAAATACAATGCCTTaGTGTTCAGGTGGTGACAACTGCTCTTTAAGAGGG +
Preference number: 3 (lower is better)
Translates to: VNKLTGHENTMP*CSGGDNCSLRG
Trigger: CCCTCTTAAAGAGCAGTTGTCACCACCTGAACACCAAGGCATTGTATTTTCATGCCCAGTTAACTTATTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR GCA 90 bp ACAAACGCAGTATGCACGCTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCTTCTGCGGGTGCTGCTaGGGGTGCTGCTGCGGGTGC +
Preference number: 4 (lower is better)
Translates to: TNAVCTLLADRAAQTANLFCGCC*GCCCGC
Trigger: GCACCCGCAGCAGCACCCGCAGCAGCACCCGCAGAA...GAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTGCGTTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR GCA 90 bp TCGAAACCTGTGCATTCCTTGGTGACCTCCGGAGAGAGAACATGGGCCGGCAGTGCGGCCCGGGAAACTTaGAGGGGCTCCCCCGGGACT +
Preference number: 4 (lower is better)
Translates to: SKPVHSLVTSGERTWAGSAARET*RGSPGT
Trigger: AGTCCCGGGGGAGCCCCTGCAAGTTTCCCGGGCCGC...ACTGCCGGCCCATGTTCTCTCTCCGGAGGTCACCAAGGAATGCACAGGTTTCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR GCA 90 bp ACAAACGCAGTATGCACGCTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCCCCAGCTCCTCCCTCTaGCGGGAGAAGTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: TNAVCTLLADRAAQTANLPSSSL*REKSWW
Trigger: CCACCAGGACTTCTCCCGGCAGAGGGAGGAGCTGGG...GAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTGCGTTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR GCA 90 bp ACAAACGCAGTATGCACGCTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCTTCTGCTCGACGCCCTaGAAGCCCTGGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TNAVCTLLADRAAQTANLFCSTP*KPWPSS
Trigger: GGAGCTGGGCCAGGGCTTGCAGGGCGTCGAGCAGAA...GAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTGCGTTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR GCA 90 bp ACAAACGCAGTATGCACGCTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCGCCAGGCGCTGCTCGTaGTCCTGGCTCTTGGACAGG +
Preference number: 4 (lower is better)
Translates to: TNAVCTLLADRAAQTANLARRCS*SWLLDR
Trigger: CCTGTCCAAGAGCCAGGAGCACGAGCAGCGCCTGGC...GAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTGCGTTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CCA 90 bp ACAAACGCAGTATGCACGCTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCGGCTCCTCACCGTGCTaGCCAGGCCATCCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: TNAVCTLLADRAAQTANLGSSPC*PGHPGL
Trigger: CAGACCAGGATGGCCTGGCCAGCACGGTGAGGAGCC...GAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTGCGTTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR TCA 90 bp CAGTATGCACGCTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCTTCATGGTGTCGGCCGCCTCCTTaGAAGCCTGCTGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: QYARSLPTGLPRRQTSSWCRPPP*KPAAPA
Trigger: AGCAGGAGCAGCAGGCTTTCAAGGAGGCGGCCGACA...CCATGAAGAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR GCA 90 bp ATCACAAGATGCGTCAGGAAGAGAAACGACACGCACACCATGAGGGAGGCAGCCCCGTGCGCCTGGTTCTaGGGGTGCTGCTGCGGGTGC +
Preference number: 4 (lower is better)
Translates to: ITRCVRKRNDTHTMREAAPCAWF*GCCCGC
Trigger: GCACCCGCAGCAGCACCCGCAGAACCAGGCGCACGG...GGCTGCCTCCCTCATGGTGTGCGTGTCGTTTCTCTTCCTGACGCATCTTGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR GCA 90 bp TCGAAACCTGTGCATTCCTTGGTGACCTCCGGAGAGAGAACATGGGCCGGCAGTTGGCTGCGCCGGACCTaGTGGACCTCCTCCAGGACG +
Preference number: 4 (lower is better)
Translates to: SKPVHSLVTSGERTWAGSWLRRT*WTSSRT
Trigger: CGTCCTGGAGGAGGTCCAGCAGGTCCGGCGCAGCCA...ACTGCCGGCCCATGTTCTCTCTCCGGAGGTCACCAAGGAATGCACAGGTTTCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CCA 90 bp AGGGAGGCAGCCCTCAAGCAGCGGATTCCTTTCAAAGAAAGACCCAGGGGCTTCCGGGAGAAGTCCTGGTaGCTGCGCCGGACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: REAALKQRIPFKERPRGFREKSW*LRRTCW
Trigger: CCAGCAGGTCCGGCGCAGCCACCAGGACTTCTCCCG...GAAGCCCCTGGGTCTTTCTTTGAAAGGAATCCGCTGCTTGAGGGCTGCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR TCA 90 bp CAGTATGCACGCTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCTTCATGGAGGCTTCCGAGTGTCTaGAGCCTCCGTCCTCCTTCG +
Preference number: 4 (lower is better)
Translates to: QYARSLPTGLPRRQTSSWRLPSV*SLRPPS
Trigger: CGAAGGAGGACGGAGGCTTCAGACACTCGGAAGCCT...CCATGAAGAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR TCA 90 bp ACAAACGCAGTATGCACGCTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCCTGCACCTTCTGGAGTaGTTCCACGGTGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: TNAVCTLLADRAAQTANLLHLLE*FHGAGE
Trigger: CTCCCCAGCACCGTGGAATCACTCCAGAAGGTGCAG...GAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTGCGTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR GCA 90 bp ACAAACGCAGTATGCACGCTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCAGTATGCACGCTCCTTaGCGACAGGGCTGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: TNAVCTLLADRAAQTANLSMHAP*RQGCPD
Trigger: GTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACT...GAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTGCGTTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CCA 90 bp ACAAACGCAGTATGCACGCTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCTCCTCCAGGACGTGGTaGACGCACCAGCCCGAGAAA +
Preference number: 4 (lower is better)
Translates to: TNAVCTLLADRAAQTANLSSRTW*THQPEK
Trigger: TTTCTCGGGCTGGTGCGTCCACCACGTCCTGGAGGA...GAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTGCGTTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR TCA 90 bp ATCACAAGATGCGTCAGGAAGAGAAACGACACGCACACCATGAGGGAGGCAGCCTGTTCTCCAGGGACGTaGAGTCCCGCTCCCGGGCGT +
Preference number: 4 (lower is better)
Translates to: ITRCVRKRNDTHTMREAACSPGT*SPAPGR
Trigger: ACGCCCGGGAGCGGGACTTCACGTCCCTGGAGAACA...GGCTGCCTCCCTCATGGTGTGCGTGTCGTTTCTCTTCCTGACGCATCTTGTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR TCA 90 bp AGGGAGGCAGCCCTCAAGCAGCGGATTCCTTTCAAAGAAAGACCCAGGGGCTTCATCCTGGTCTGCCTCTaGGGACCCGAGGCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: REAALKQRIPFKERPRGFILVCL*GPEAFQ
Trigger: CTGGAAGGCCTCGGGTCCTCAGAGGCAGACCAGGAT...GAAGCCCCTGGGTCTTTCTTTGAAAGGAATCCGCTGCTTGAGGGCTGCCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR TCA 90 bp TCGAAACCTGTGCATTCCTTGGTGACCTCCGGAGAGAGAACATGGGCCGGCAGTACGACACGCACACCATaGGGGAGGCAGCCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: SKPVHSLVTSGERTWAGSTTRTP*GRQPSS
Trigger: GCTTGAGGGCTGCCTCCCTCATGGTGTGCGTGTCGT...ACTGCCGGCCCATGTTCTCTCTCCGGAGGTCACCAAGGAATGCACAGGTTTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CCA 90 bp ATCACAAGATGCGTCAGGAAGAGAAACGACACGCACACCATGAGGGAGGCAGCCTGGAGCCCCTTTGTTTaGCCGAGGGCATGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: ITRCVRKRNDTHTMREAAWSPFV*PRAWRA
Trigger: CGCCCGCCATGCCCTCGGCCAAACAAAGGGGCTCCA...GGCTGCCTCCCTCATGGTGTGCGTGTCGTTTCTCTTCCTGACGCATCTTGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CCA 90 bp CTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCTTCATGGACATCATGTTACTGGCCAGGCCATCCTaGTCTGCCTCTGAGGACCCG +
Preference number: 4 (lower is better)
Translates to: LLADRAAQTANLFMDIMLLARPS*SASEDP
Trigger: CGGGTCCTCAGAGGCAGACCAGGATGGCCTGGCCAG...TAACATGATGTCCATGAAGAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR GCA 90 bp GATATCACAAGATGCGTCAGGAAGAGAAACGACACGCACACCATGAGGGAGGCATTCTCCGTGAGGGCCTaGAGGGCGAGCCGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: DITRCVRKRNDTHTMREAFSVRA*RASRSV
Trigger: CACGGAGCGGCTCGCCCTGCAGGCCCTCACGGAGAA...TGCCTCCCTCATGGTGTGCGTGTCGTTTCTCTTCCTGACGCATCTTGTGATATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CCA 90 bp CAGTATGCACGCTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCTTCATGGGAATCGGACTTCAGCTaGCGGAGCTCTTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: QYARSLPTGLPRRQTSSWESDFS*RSSSSS
Trigger: ACTGGAGGAAGAGCTCCGCCAGCTGAAGTCCGATTC...CCATGAAGAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CCA 90 bp TCGAAACCTGTGCATTCCTTGGTGACCTCCGGAGAGAGAACATGGGCCGGCAGTTCCTCCTTCGGCCCGTaGGAATCGGACTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SKPVHSLVTSGERTWAGSSSFGP*ESDFSW
Trigger: CCAGCTGAAGTCCGATTCCCACGGGCCGAAGGAGGA...ACTGCCGGCCCATGTTCTCTCTCCGGAGGTCACCAAGGAATGCACAGGTTTCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CCA 90 bp CTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCTTCATGGACATCATGTTACGTGCTCCTGGCTCTTaGACAGGAGGGACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LLADRAAQTANLFMDIMLRAPGS*TGGTPG
Trigger: GCCTGGAGTCCCTCCTGTCCAAGAGCCAGGAGCACG...TAACATGATGTCCATGAAGAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CCA 90 bp ACAAACGCAGTATGCACGCTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCAAGTCCGCCTCCACTTaGCTGACTGAGGCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: TNAVCTLLADRAAQTANLKSAST*LTEAFR
Trigger: CCTGAAAGCCTCAGTCAGCCAAGTGGAGGCGGACTT...GAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTGCGTTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR TCA 90 bp TCGAAACCTGTGCATTCCTTGGTGACCTCCGGAGAGAGAACATGGGCCGGCAGTCCGCCTCCACTTGGCTaGCTGAGGCTTTCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: SKPVHSLVTSGERTWAGSPPPLG*LRLSGC
Trigger: ACAACCTGAAAGCCTCAGTCAGCCAAGTGGAGGCGG...ACTGCCGGCCCATGTTCTCTCTCCGGAGGTCACCAAGGAATGCACAGGTTTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR GCA 90 bp TCGAAACCTGTGCATTCCTTGGTGACCTCCGGAGAGAGAACATGGGCCGGCAGTAAAGACTGCACCTTCTaGTCGACGCCCTGCAAGCCC +
Preference number: 4 (lower is better)
Translates to: SKPVHSLVTSGERTWAGSKDCTF*STPCKP
Trigger: GGGCTTGCAGGGCGTCGAGCAGAAGGTGCAGTCTTT...ACTGCCGGCCCATGTTCTCTCTCCGGAGGTCACCAAGGAATGCACAGGTTTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR GCA 90 bp TCGAAACCTGTGCATTCCTTGGTGACCTCCGGAGAGAGAACATGGGCCGGCAGTAAAGCCTGCTGCTCCTaGTTGAGGCTCACCAGCTCG +
Preference number: 4 (lower is better)
Translates to: SKPVHSLVTSGERTWAGSKACCS*LRLTSS
Trigger: CGAGCTGGTGAGCCTCAAGCAGGAGCAGCAGGCTTT...ACTGCCGGCCCATGTTCTCTCTCCGGAGGTCACCAAGGAATGCACAGGTTTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR GCA 90 bp AGGGAGGCAGCCCTCAAGCAGCGGATTCCTTTCAAAGAAAGACCCAGGGGCTTCAGCAGCGTGTGCACCTaGTCCTGCACCTTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: REAALKQRIPFKERPRGFSSVCT*SCTFWS
Trigger: ACTCCAGAAGGTGCAGGAGCAGGTGCACACGCTGCT...GAAGCCCCTGGGTCTTTCTTTGAAAGGAATCCGCTGCTTGAGGGCTGCCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR GCA 90 bp CAGTATGCACGCTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCTTCATGGTACACAAACGCAGTATaGACGCTCCTTGCCGACAGG +
Preference number: 4 (lower is better)
Translates to: QYARSLPTGLPRRQTSSWYTNAV*TLLADR
Trigger: CCTGTCGGCAAGGAGCGTGCATACTGCGTTTGTGTA...CCATGAAGAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CCA 90 bp GATATCACAAGATGCGTCAGGAAGAGAAACGACACGCACACCATGAGGGAGGCAACCTCCTCCAGGACGTaGTGGACGCACCAGCCCGAG +
Preference number: 4 (lower is better)
Translates to: DITRCVRKRNDTHTMREATSSRT*WTHQPE
Trigger: CTCGGGCTGGTGCGTCCACCACGTCCTGGAGGAGGT...TGCCTCCCTCATGGTGTGCGTGTCGTTTCTCTTCCTGACGCATCTTGTGATATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR TCA 90 bp CTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCTTCATGGACATCATGTTACTGGAGTCCAGTCCCTaGCTCTTTTGCTGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: LLADRAAQTANLFMDIMLLESSP*LFCWSA
Trigger: GGCACTCCAGCAAAAGAGTCAGGGACTGGACTCCAG...TAACATGATGTCCATGAAGAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR GCA 90 bp CTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCTTCATGGACATCATGTTAGCCTCCTTGAAAGCCTaGTGCTCCTGCTTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LLADRAAQTANLFMDIMLASLKA*CSCLRL
Trigger: GAGCCTCAAGCAGGAGCAGCAGGCTTTCAAGGAGGC...TAACATGATGTCCATGAAGAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR GCA 90 bp GATATCACAAGATGCGTCAGGAAGAGAAACGACACGCACACCATGAGGGAGGCACGCGCAGAAGCCACCTaGATGGAGAGCACCCCATCC +
Preference number: 4 (lower is better)
Translates to: DITRCVRKRNDTHTMREARAEAT*MESTPS
Trigger: GGATGGGGTGCTCTCCATGCAGGTGGCTTCTGCGCG...TGCCTCCCTCATGGTGTGCGTGTCGTTTCTCTTCCTGACGCATCTTGTGATATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CCA 90 bp CAGTATGCACGCTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCTTCATGGTTCTGGCTCCTCTTCTaGACTTCTGTGAAGATGGCG +
Preference number: 4 (lower is better)
Translates to: QYARSLPTGLPRRQTSSWFWLLF*TSVKMA
Trigger: CGCCATCTTCACAGAAGTCCAGAAGAGGAGCCAGAA...CCATGAAGAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CCA 90 bp CTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCTTCATGGACATCATGTTACAGAAGCCACCTGCATaGAGAGCACCCCATCCTCCA +
Preference number: 4 (lower is better)
Translates to: LLADRAAQTANLFMDIMLQKPPA*RAPHPP
Trigger: TGGAGGATGGGGTGCTCTCCATGCAGGTGGCTTCTG...TAACATGATGTCCATGAAGAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CCA 90 bp GATATCACAAGATGCGTCAGGAAGAGAAACGACACGCACACCATGAGGGAGGCACGCTGCTCGTGCTCCTaGCTCTTGGACAGGAGGGAC +
Preference number: 4 (lower is better)
Translates to: DITRCVRKRNDTHTMREARCSCS*LLDRRD
Trigger: GTCCCTCCTGTCCAAGAGCCAGGAGCACGAGCAGCG...TGCCTCCCTCATGGTGTGCGTGTCGTTTCTCTTCCTGACGCATCTTGTGATATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR TCA 90 bp AGGGAGGCAGCCCTCAAGCAGCGGATTCCTTTCAAAGAAAGACCCAGGGGCTTCTCAGACTCCATAGTCTaGAGGGTACTTCTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: REAALKQRIPFKERPRGFSDSIV*RVLLRA
Trigger: GGCCCTGAGAAGTACCCTTCAGACTATGGAGTCTGA...GAAGCCCCTGGGTCTTTCTTTGAAAGGAATCCGCTGCTTGAGGGCTGCCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CCA 90 bp TCGAAACCTGTGCATTCCTTGGTGACCTCCGGAGAGAGAACATGGGCCGGCAGTCCCACTCTCTGGACTTaGCTGAGGTCTGTATCTCCT +
Preference number: 4 (lower is better)
Translates to: SKPVHSLVTSGERTWAGSPTLWT*LRSVSP
Trigger: AGGAGATACAGACCTCAGCCAAGTCCAGAGAGTGGG...ACTGCCGGCCCATGTTCTCTCTCCGGAGGTCACCAAGGAATGCACAGGTTTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CCA 90 bp AGATACAGCAAACAATTACACAAACGCAGTATGCACGCTCCTTGCCGACAGGGCGTGATTCCACGGTGCTaGGGAGCTCGCCCACACTCC +
Preference number: 4 (lower is better)
Translates to: RYSKQLHKRSMHAPCRQGVIPRC*GARPHS
Trigger: GGAGTGTGGGCGAGCTCCCCAGCACCGTGGAATCAC...GCCCTGTCGGCAAGGAGCGTGCATACTGCGTTTGTGTAATTGTTTGCTGTATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR TCA 90 bp AGATACAGCAAACAATTACACAAACGCAGTATGCACGCTCCTTGCCGACAGGGCGGTAGAAGAGAAAGTTaGGCGCCCTGCCGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: RYSKQLHKRSMHAPCRQGGRRES*APCRAC
Trigger: GCAGGCTCGGCAGGGCGCTCAACTTTCTCTTCTACC...GCCCTGTCGGCAAGGAGCGTGCATACTGCGTTTGTGTAATTGTTTGCTGTATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR TCA 90 bp ATCACAAGATGCGTCAGGAAGAGAAACGACACGCACACCATGAGGGAGGCAGCCCTGTGCATTCCTTGGTaGCCTCCGGAGAGAGAACAT +
Preference number: 4 (lower is better)
Translates to: ITRCVRKRNDTHTMREAALCIPW*PPEREH
Trigger: ATGTTCTCTCTCCGGAGGTCACCAAGGAATGCACAG...GGCTGCCTCCCTCATGGTGTGCGTGTCGTTTCTCTTCCTGACGCATCTTGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR GCA 90 bp CCAGACGGCAAACCTCTTCATGGACATCATGTTAAAATAAAAGGACTTGGCCTGTGGTTCTGCGGGTGCTaGTGCGGGTGCTGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: PDGKPLHGHHVKIKGLGLWFCGC*CGCCCG
Trigger: CCCGCAGCAGCACCCGCAGCAGCACCCGCAGAACCA...CAGGCCAAGTCCTTTTATTTTAACATGATGTCCATGAAGAGGTTTGCCGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR GCA 90 bp CCAGACGGCAAACCTCTTCATGGACATCATGTTAAAATAAAAGGACTTGGCCTGGCCTGGTTCTGCGGGTaGTGCTGCGGGTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PDGKPLHGHHVKIKGLGLAWFCG*CCGCCC
Trigger: GCAGCAGCACCCGCAGCAGCACCCGCAGAACCAGGC...CAGGCCAAGTCCTTTTATTTTAACATGATGTCCATGAAGAGGTTTGCCGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR GCA 90 bp TCCCCTCCTCATTCAGAGCTGACAGCTATGAGCTTTAACCGGTTCAAAGTGGAAGGAGTGATTCCACGGTaGTGGGGAGCTCGCCCACAC +
Preference number: 4 (lower is better)
Translates to: SPPHSELTAMSFNRFKVEGVIPR*WGARPH
Trigger: GTGTGGGCGAGCTCCCCAGCACCGTGGAATCACTCC...TTCCACTTTGAACCGGTTAAAGCTCATAGCTGTCAGCTCTGAATGAGGAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR GCA 90 bp ACAAACGCAGTATGCACGCTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCGGCATGAAAATACAATaGCTTGGTGTTCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: TNAVCTLLADRAAQTANLGMKIQ*LGVQVV
Trigger: CACCACCTGAACACCAAGGCATTGTATTTTCATGCC...GAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTGCGTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CCA 90 bp CCAGACGGCAAACCTCTTCATGGACATCATGTTAAAATAAAAGGACTTGGCCTGCGCCGTGGCCGCCCTTaGAGCCCCTTTGTTTGGCCG +
Preference number: 4 (lower is better)
Translates to: PDGKPLHGHHVKIKGLGLRRGRP*SPFVWP
Trigger: CGGCCAAACAAAGGGGCTCCAAGGGCGGCCACGGCG...CAGGCCAAGTCCTTTTATTTTAACATGATGTCCATGAAGAGGTTTGCCGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CCA 90 bp CCAGACGGCAAACCTCTTCATGGACATCATGTTAAAATAAAAGGACTTGGCCTGCTGCGCCGGACCTGCTaGACCTCCTCCAGGACGTGG +
Preference number: 4 (lower is better)
Translates to: PDGKPLHGHHVKIKGLGLLRRTC*TSSRTW
Trigger: CCACGTCCTGGAGGAGGTCCAGCAGGTCCGGCGCAG...CAGGCCAAGTCCTTTTATTTTAACATGATGTCCATGAAGAGGTTTGCCGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CCA 90 bp CCAGACGGCAAACCTCTTCATGGACATCATGTTAAAATAAAAGGACTTGGCCTGTGCCGGGAGAAGTCCTaGTGGCTGCGCCGGACCTGC +
Preference number: 4 (lower is better)
Translates to: PDGKPLHGHHVKIKGLGLCREKS*WLRRTC
Trigger: GCAGGTCCGGCGCAGCCACCAGGACTTCTCCCGGCA...CAGGCCAAGTCCTTTTATTTTAACATGATGTCCATGAAGAGGTTTGCCGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378026.5
3UTR CAA 72 bp CAGCAAACAATTACACAAACGCAGTATGCACGCTCCTaGCCGACAGGGCTGCCCAGACGGCAAACCTCTTCA +
Preference number: 4 (lower is better)
Translates to: QQTITQTQYARS*PTGLPRRQTSS
Trigger: TGAAGAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTGCGTTTGTGTAATTGTTTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR TCA 90 bp AGGGAGGCAGCCCTCAAGCAGCGGATTCCTTTCAAAGAAAGACCCAGGGGCTTCTTGCCTTCATGTCATTaGTCTCCTTCTGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: REAALKQRIPFKERPRGFLPSCH*SPSGSS
Trigger: AGAGGAGCCAGAAGGAGATCAATGACATGAAGGCAA...GAAGCCCCTGGGTCTTTCTTTGAAAGGAATCCGCTGCTTGAGGGCTGCCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR TCA 90 bp CAGTATGCACGCTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCTTCATGGTTGCATAGTTACCTCTaGTATCACAAGATGCGTCAG +
Preference number: 4 (lower is better)
Translates to: QYARSLPTGLPRRQTSSWLHSYL*YHKMRQ
Trigger: CTGACGCATCTTGTGATATCAGAGGTAACTATGCAA...CCATGAAGAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CCA 90 bp ACAAACGCAGTATGCACGCTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCGGGAGCTTCTCAAGATaGACTCAAAAGTTCCAAATG +
Preference number: 4 (lower is better)
Translates to: TNAVCTLLADRAAQTANLGSFSR*TQKFQM
Trigger: CATTTGGAACTTTTGAGTCCATCTTGAGAAGCTCCC...GAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTGCGTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CCA 90 bp CAGTATGCACGCTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCTTCATGGAGGTCTTGTTTATGTTaGGAGCTTCTCAAGATGGAC +
Preference number: 4 (lower is better)
Translates to: QYARSLPTGLPRRQTSSWRSCLC*ELLKMD
Trigger: GTCCATCTTGAGAAGCTCCCAACATAAACAAGACCT...CCATGAAGAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CCA 90 bp GATATCACAAGATGCGTCAGGAAGAGAAACGACACGCACACCATGAGGGAGGCAGCGTCCTTCACCACATaGATCCCATCCGAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: DITRCVRKRNDTHTMREAASFTT*IPSERS
Trigger: AGACCTCTCGGATGGGATCCATGTGGTGAAGGACGC...TGCCTCCCTCATGGTGTGCGTGTCGTTTCTCTTCCTGACGCATCTTGTGATATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR TCA 90 bp GATATCACAAGATGCGTCAGGAAGAGAAACGACACGCACACCATGAGGGAGGCACTCTCTGGACTTGGCTaGGGTCTGTATCTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: DITRCVRKRNDTHTMREALSGLG*GLYLLH
Trigger: GTGAAGGAGATACAGACCTCAGCCAAGTCCAGAGAG...TGCCTCCCTCATGGTGTGCGTGTCGTTTCTCTTCCTGACGCATCTTGTGATATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR GCA 90 bp ATCACAAGATGCGTCAGGAAGAGAAACGACACGCACACCATGAGGGAGGCAGCCGTTCCAAATGTGGCTTaGAAAGACTGCACCTTCTGC +
Preference number: 4 (lower is better)
Translates to: ITRCVRKRNDTHTMREAAVPNVA*KDCTFC
Trigger: GCAGAAGGTGCAGTCTTTGCAAGCCACATTTGGAAC...GGCTGCCTCCCTCATGGTGTGCGTGTCGTTTCTCTTCCTGACGCATCTTGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR GCA 90 bp CTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCTTCATGGACATCATGTTACAGGGAGGCAACCTTTaGCTTCATGTCATTGATCTC +
Preference number: 4 (lower is better)
Translates to: LLADRAAQTANLFMDIMLQGGNL*LHVIDL
Trigger: GAGATCAATGACATGAAGGCAAAGGTTGCCTCCCTG...TAACATGATGTCCATGAAGAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR GCA 90 bp AGATACAGCAAACAATTACACAAACGCAGTATGCACGCTCCTTGCCGACAGGGCTCCTTGAAAGCCTGCTaGTCCTGCTTGAGGCTCACC +
Preference number: 4 (lower is better)
Translates to: RYSKQLHKRSMHAPCRQGSLKAC*SCLRLT
Trigger: GGTGAGCCTCAAGCAGGAGCAGCAGGCTTTCAAGGA...GCCCTGTCGGCAAGGAGCGTGCATACTGCGTTTGTGTAATTGTTTGCTGTATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR GCA 90 bp AGGGAGGCAGCCCTCAAGCAGCGGATTCCTTTCAAAGAAAGACCCAGGGGCTTCAAGGCTTTCAAATCCTaGTTGTTCCCCTCAGATTCT +
Preference number: 4 (lower is better)
Translates to: REAALKQRIPFKERPRGFKAFKS*LFPSDS
Trigger: AGAATCTGAGGGGAACAAGCAGGATTTGAAAGCCTT...GAAGCCCCTGGGTCTTTCTTTGAAAGGAATCCGCTGCTTGAGGGCTGCCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR GCA 90 bp AGGGAGGCAGCCCTCAAGCAGCGGATTCCTTTCAAAGAAAGACCCAGGGGCTTCTATTTTGACCGAGTATaGAACCAAACTGTCCACAGC +
Preference number: 4 (lower is better)
Translates to: REAALKQRIPFKERPRGFYFDRV*NQTVHS
Trigger: GCTGTGGACAGTTTGGTTGCATACTCGGTCAAAATA...GAAGCCCCTGGGTCTTTCTTTGAAAGGAATCCGCTGCTTGAGGGCTGCCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR GCA 90 bp CAGTATGCACGCTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCTTCATGGAGGAAACCAACCAAATaGAGAAGCAGAGAACTTAAA +
Preference number: 4 (lower is better)
Translates to: QYARSLPTGLPRRQTSSWRKPTK*RSRELK
Trigger: TTTAAGTTCTCTGCTTCTGCATTTGGTTGGTTTCCT...CCATGAAGAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CCA 90 bp TCCCCTCCTCATTCAGAGCTGACAGCTATGAGCTTTAACCGGTTCAAAGTGGAATGCTCCTGCACCTTCTaGAGTGATTCCACGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SPPHSELTAMSFNRFKVECSCTF*SDSTVL
Trigger: CAGCACCGTGGAATCACTCCAGAAGGTGCAGGAGCA...TTCCACTTTGAACCGGTTAAAGCTCATAGCTGTCAGCTCTGAATGAGGAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR TCA 90 bp ATCACAAGATGCGTCAGGAAGAGAAACGACACGCACACCATGAGGGAGGCAGCCCGTTGGTTTCTATTTTaGCCGAGTATGCAACCAAAC +
Preference number: 4 (lower is better)
Translates to: ITRCVRKRNDTHTMREAARWFLF*PSMQPN
Trigger: GTTTGGTTGCATACTCGGTCAAAATAGAAACCAACG...GGCTGCCTCCCTCATGGTGTGCGTGTCGTTTCTCTTCCTGACGCATCTTGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR TCA 90 bp GATATCACAAGATGCGTCAGGAAGAGAAACGACACGCACACCATGAGGGAGGCATTGGTGTTCAGGTGGTaGCAACTGCTCTTTAAGAGG +
Preference number: 4 (lower is better)
Translates to: DITRCVRKRNDTHTMREALVFRW*QLLFKR
Trigger: CCTCTTAAAGAGCAGTTGTCACCACCTGAACACCAA...TGCCTCCCTCATGGTGTGCGTGTCGTTTCTCTTCCTGACGCATCTTGTGATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CCA 90 bp CTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCTTCATGGACATCATGTTACAAAAGTTCCAAATGTaGCTTGCAAAGACTGCACCT +
Preference number: 4 (lower is better)
Translates to: LLADRAAQTANLFMDIMLQKFQM*LAKTAP
Trigger: AGGTGCAGTCTTTGCAAGCCACATTTGGAACTTTTG...TAACATGATGTCCATGAAGAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR TCA 90 bp GATATCACAAGATGCGTCAGGAAGAGAAACGACACGCACACCATGAGGGAGGCACATCCGAGAGGTCTTTaGGAATCTCATTCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: DITRCVRKRNDTHTMREAHPRGL*ESHSGV
Trigger: AACTCCAGAATGAGATTCTCAAAGACCTCTCGGATG...TGCCTCCCTCATGGTGTGCGTGTCGTTTCTCTTCCTGACGCATCTTGTGATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR TCA 90 bp AGATACAGCAAACAATTACACAAACGCAGTATGCACGCTCCTTGCCGACAGGGCTCTTCTGGACTTCTGTaGAGATGGCGATGTTGTCGT +
Preference number: 4 (lower is better)
Translates to: RYSKQLHKRSMHAPCRQGSSGLL*RWRCCR
Trigger: ACGACAACATCGCCATCTTCACAGAAGTCCAGAAGA...GCCCTGTCGGCAAGGAGCGTGCATACTGCGTTTGTGTAATTGTTTGCTGTATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR GCA 90 bp TCCCCTCCTCATTCAGAGCTGACAGCTATGAGCTTTAACCGGTTCAAAGTGGAAACTCTTTTGCTGGAGTaGCTCAAAGGCTTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: SPPHSELTAMSFNRFKVETLLLE*LKGFRV
Trigger: CACTCGGAAGCCTTTGAGGCACTCCAGCAAAAGAGT...TTCCACTTTGAACCGGTTAAAGCTCATAGCTGTCAGCTCTGAATGAGGAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CCA 90 bp AGGGAGGCAGCCCTCAAGCAGCGGATTCCTTTCAAAGAAAGACCCAGGGGCTTCTTAACCGGTTCAAAGTaGAAGACAAGTGAGAGATAT +
Preference number: 4 (lower is better)
Translates to: REAALKQRIPFKERPRGFLTGSK*KTSERY
Trigger: ATATCTCTCACTTGTCTTCCACTTTGAACCGGTTAA...GAAGCCCCTGGGTCTTTCTTTGAAAGGAATCCGCTGCTTGAGGGCTGCCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR GCA 90 bp ATCACAAGATGCGTCAGGAAGAGAAACGACACGCACACCATGAGGGAGGCAGCCTTTTTACTTGAAATCTaGCAGCCAGACAGGATTTCT +
Preference number: 4 (lower is better)
Translates to: ITRCVRKRNDTHTMREAAFLLEI*QPDRIS
Trigger: AGAAATCCTGTCTGGCTGGCAGATTTCAAGTAAAAA...GGCTGCCTCCCTCATGGTGTGCGTGTCGTTTCTCTTCCTGACGCATCTTGTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CCA 90 bp AGATACAGCAAACAATTACACAAACGCAGTATGCACGCTCCTTGCCGACAGGGCGAAAATACAATGCCTTaGTGTTCAGGTGGTGACAAC +
Preference number: 4 (lower is better)
Translates to: RYSKQLHKRSMHAPCRQGENTMP*CSGGDN
Trigger: GTTGTCACCACCTGAACACCAAGGCATTGTATTTTC...GCCCTGTCGGCAAGGAGCGTGCATACTGCGTTTGTGTAATTGTTTGCTGTATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR GCA 90 bp CCAGACGGCAAACCTCTTCATGGACATCATGTTAAAATAAAAGGACTTGGCCTGTCAGGTGGTGACAACTaGTCTTTAAGAGGGGACAAG +
Preference number: 4 (lower is better)
Translates to: PDGKPLHGHHVKIKGLGLSGGDN*SLRGDK
Trigger: CTTGTCCCCTCTTAAAGAGCAGTTGTCACCACCTGA...CAGGCCAAGTCCTTTTATTTTAACATGATGTCCATGAAGAGGTTTGCCGTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR GCA 90 bp TCCCCTCCTCATTCAGAGCTGACAGCTATGAGCTTTAACCGGTTCAAAGTGGAATCTGATATCACAAGATaGGTCAGGAAGAGAAACGAC +
Preference number: 4 (lower is better)
Translates to: SPPHSELTAMSFNRFKVESDITR*VRKRND
Trigger: GTCGTTTCTCTTCCTGACGCATCTTGTGATATCAGA...TTCCACTTTGAACCGGTTAAAGCTCATAGCTGTCAGCTCTGAATGAGGAGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR GCA 90 bp CCAGACGGCAAACCTCTTCATGGACATCATGTTAAAATAAAAGGACTTGGCCTGTTTAAATCCGCGCCCTaGACACGCAATTCATTTAGA +
Preference number: 4 (lower is better)
Translates to: PDGKPLHGHHVKIKGLGLFKSAP*TRNSFR
Trigger: TCTAAATGAATTGCGTGTGCAGGGCGCGGATTTAAA...CAGGCCAAGTCCTTTTATTTTAACATGATGTCCATGAAGAGGTTTGCCGTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CCA 90 bp CCAGACGGCAAACCTCTTCATGGACATCATGTTAAAATAAAAGGACTTGGCCTGTTGAGAATCTCATTCTaGAGTTTCTGCAGCACTTCG +
Preference number: 4 (lower is better)
Translates to: PDGKPLHGHHVKIKGLGLLRISF*SFCSTS
Trigger: CGAAGTGCTGCAGAAACTCCAGAATGAGATTCTCAA...CAGGCCAAGTCCTTTTATTTTAACATGATGTCCATGAAGAGGTTTGCCGTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS GCA 90 bp GACTTGCCGCCGCCGCCGCCGCCGCCGCGGTGGCCGCCCTTGCCGTaGGCCTGGTTCTGCGGGTGCTGCTGCGGGTGCTGCTGCGGGTGC +
Preference number: 5 (lower is better)
Translates to: DLPPPPPPPRWPPLP*AWFCGCCCGCCCGC
Trigger: GCACCCGCAGCAGCACCCGCAGCAGCACCCGCAGAACCAGGCGCACGGCAAGGGCGGCCACCGCGGCGGCGGCGGCGGCGGCGGCAAGTC
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS CCA 90 bp AGCGCGGCGCGCGGCCCGGGAAACTTGCAGGGGCTCCCCCGGGACTaGGCGAGCGGCACGCGGGCGCTGCTGGCGTCGGAGCGGCGAGAG +
Preference number: 5 (lower is better)
Translates to: SAARGPGNLQGLPRD*ASGTRALLASERRE
Trigger: CTCTCGCCGCTCCGACGCCAGCAGCGCCCGCGTGCCGCTCGCCCAGTCCCGGGGGAGCCCCTGCAAGTTTCCCGGGCCGCGCGCCGCGCT
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS GCA 90 bp AGGAGGACTTGCCGCCGCCGCCGCCGCCGCCGCGGTGGCCGCCCTTaGCGTGCGCCTGGTTCTGCGGGTGCTGCTGCGGGTGCTGCTGCG +
Preference number: 5 (lower is better)
Translates to: RRTCRRRRRRRGGRP*RAPGSAGAAAGAAA
Trigger: CGCAGCAGCACCCGCAGCAGCACCCGCAGAACCAGGCGCACGGCAAGGGCGGCCACCGCGGCGGCGGCGGCGGCGGCGGCAAGTCCTCCT
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS CCA 90 bp GCCGGCGGCGGCTTCTTCGCCACGTCATCCGCGCCGCCCGACGGGTaGGCACCCTTCTCCGAGGGGCTCGCGGCGCCGTGGCCGCCCTTG +
Preference number: 5 (lower is better)
Translates to: AGGGFFATSSAPPDG*APFSEGLAAPWPPL
Trigger: CAAGGGCGGCCACGGCGCCGCGAGCCCCTCGGAGAAGGGTGCCCACCCGTCGGGCGGCGCGGATGACGTGGCGAAGAAGCCGCCGCCGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS CCA 90 bp GGTGGGCACCCTTCTCCGAGGGGCTCGCGGCGCCGTGGCCGCCCTTaGAGCCCCTTTGTTTGGCCGAGGGCATGGCGGGCGCGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: GGHPSPRGSRRRGRP*SPFVWPRAWRARRR
Trigger: CCGCCGCCGCGCCCGCCATGCCCTCGGCCAAACAAAGGGGCTCCAAGGGCGGCCACGGCGCCGCGAGCCCCTCGGAGAAGGGTGCCCACC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS CCA 90 bp CCGCCCGACGGGTGGGCACCCTTCTCCGAGGGGCTCGCGGCGCCGTaGCCGCCCTTGGAGCCCCTTTGTTTGGCCGAGGGCATGGCGGGC +
Preference number: 5 (lower is better)
Translates to: PPDGWAPFSEGLAAP*PPLEPLCLAEGMAG
Trigger: GCCCGCCATGCCCTCGGCCAAACAAAGGGGCTCCAAGGGCGGCCACGGCGCCGCGAGCCCCTCGGAGAAGGGTGCCCACCCGTCGGGCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS CCA 90 bp TCCTGGTGGCTGCGCCGGACCTGCTGGACCTCCTCCAGGACGTGGTaGACGCACCAGCCCGAGAAAGCGGCCGCCGCCACCAGGGCGAGG +
Preference number: 5 (lower is better)
Translates to: SWWLRRTCWTSSRTW*THQPEKAAAATRAR
Trigger: CCTCGCCCTGGTGGCGGCGGCCGCTTTCTCGGGCTGGTGCGTCCACCACGTCCTGGAGGAGGTCCAGCAGGTCCGGCGCAGCCACCAGGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS CCA 90 bp AAGTCCTGGTGGCTGCGCCGGACCTGCTGGACCTCCTCCAGGACGTaGTGGACGCACCAGCCCGAGAAAGCGGCCGCCGCCACCAGGGCG +
Preference number: 5 (lower is better)
Translates to: KSWWLRRTCWTSSRT*WTHQPEKAAAATRA
Trigger: CGCCCTGGTGGCGGCGGCCGCTTTCTCGGGCTGGTGCGTCCACCACGTCCTGGAGGAGGTCCAGCAGGTCCGGCGCAGCCACCAGGACTT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS GCA 90 bp AGCCCTGGCCCAGCTCCTCCCTCTGCCGGGAGAAGTCCTGGTGGCTaGGCCGGACCTGCTGGACCTCCTCCAGGACGTGGTGGACGCACC +
Preference number: 5 (lower is better)
Translates to: SPGPAPPSAGRSPGG*AGPAGPPPGRGGRT
Trigger: GGTGCGTCCACCACGTCCTGGAGGAGGTCCAGCAGGTCCGGCGCAGCCACCAGGACTTCTCCCGGCAGAGGGAGGAGCTGGGCCAGGGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS CCA 90 bp CCCTGCAAGCCCTGGCCCAGCTCCTCCCTCTGCCGGGAGAAGTCCTaGTGGCTGCGCCGGACCTGCTGGACCTCCTCCAGGACGTGGTGG +
Preference number: 5 (lower is better)
Translates to: PCKPWPSSSLCREKS*WLRRTCWTSSRTWW
Trigger: CCACCACGTCCTGGAGGAGGTCCAGCAGGTCCGGCGCAGCCACCAGGACTTCTCCCGGCAGAGGGAGGAGCTGGGCCAGGGCTTGCAGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS TCA 90 bp CCGAGAAAGCGGCCGCCGCCACCAGGGCGAGGTAGAAGAGAAAGTTaGGCGCCCTGCCGAGCCTGCGCGAGCAGGACGCCGAGGACGAGG +
Preference number: 5 (lower is better)
Translates to: PRKRPPPPGRGRRES*APCRACASRTPRTR
Trigger: CCTCGTCCTCGGCGTCCTGCTCGCGCAGGCTCGGCAGGGCGCTCAACTTTCTCTTCTACCTCGCCCTGGTGGCGGCGGCCGCTTTCTCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS GCA 90 bp ACCTTCTGCTCGACGCCCTGCAAGCCCTGGCCCAGCTCCTCCCTCTaGCGGGAGAAGTCCTGGTGGCTGCGCCGGACCTGCTGGACCTCC +
Preference number: 5 (lower is better)
Translates to: TFCSTPCKPWPSSSL*REKSWWLRRTCWTS
Trigger: GGAGGTCCAGCAGGTCCGGCGCAGCCACCAGGACTTCTCCCGGCAGAGGGAGGAGCTGGGCCAGGGCTTGCAGGGCGTCGAGCAGAAGGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS CCA 90 bp TGCAAGCCCTGGCCCAGCTCCTCCCTCTGCCGGGAGAAGTCCTGGTaGCTGCGCCGGACCTGCTGGACCTCCTCCAGGACGTGGTGGACG +
Preference number: 5 (lower is better)
Translates to: CKPWPSSSLCREKSW*LRRTCWTSSRTWWT
Trigger: CGTCCACCACGTCCTGGAGGAGGTCCAGCAGGTCCGGCGCAGCCACCAGGACTTCTCCCGGCAGAGGGAGGAGCTGGGCCAGGGCTTGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS CCA 90 bp TCCTCCCTCTGCCGGGAGAAGTCCTGGTGGCTGCGCCGGACCTGCTaGACCTCCTCCAGGACGTGGTGGACGCACCAGCCCGAGAAAGCG +
Preference number: 5 (lower is better)
Translates to: SSLCREKSWWLRRTC*TSSRTWWTHQPEKA
Trigger: CGCTTTCTCGGGCTGGTGCGTCCACCACGTCCTGGAGGAGGTCCAGCAGGTCCGGCGCAGCCACCAGGACTTCTCCCGGCAGAGGGAGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS GCA 90 bp AGCTCCTCCCTCTGCCGGGAGAAGTCCTGGTGGCTGCGCCGGACCTaGTGGACCTCCTCCAGGACGTGGTGGACGCACCAGCCCGAGAAA +
Preference number: 5 (lower is better)
Translates to: SSSLCREKSWWLRRT*WTSSRTWWTHQPEK
Trigger: TTTCTCGGGCTGGTGCGTCCACCACGTCCTGGAGGAGGTCCAGCAGGTCCGGCGCAGCCACCAGGACTTCTCCCGGCAGAGGGAGGAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CAA 90 bp CAGTATGCACGCTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCTTCATGGCGCGGCCCGGGAAACTaGCAGGGGCTCCCCCGGGAC +
Preference number: 5 (lower is better)
Translates to: QYARSLPTGLPRRQTSSWRGPGN*QGLPRD
Trigger: GTCCCGGGGGAGCCCCTGCAAGTTTCCCGGGCCGCG...CCATGAAGAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CAA 90 bp CAGTATGCACGCTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCTTCATGGGCCCTTGGAGCCCCTTaGTTTGGCCGAGGGCATGGC +
Preference number: 5 (lower is better)
Translates to: QYARSLPTGLPRRQTSSWALGAP*FGRGHG
Trigger: GCCATGCCCTCGGCCAAACAAAGGGGCTCCAAGGGC...CCATGAAGAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CAA 90 bp CAGTATGCACGCTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCTTCATGGGTGTCGGCCGCCTCCTaGAAAGCCTGCTGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: QYARSLPTGLPRRQTSSWVSAAS*KACCSC
Trigger: GCAGGAGCAGCAGGCTTTCAAGGAGGCGGCCGACAC...CCATGAAGAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS TCA 90 bp GTCCTGACTGAGCAGCGTGTGCACCTGCTCCTGCACCTTCTGGAGTaGTTCCACGGTGCTGGGGAGCTCGCCCACACTCCTCTTCAGCTC +
Preference number: 5 (lower is better)
Translates to: VLTEQRVHLLLHLLE*FHGAGELAHTPLQL
Trigger: GAGCTGAAGAGGAGTGTGGGCGAGCTCCCCAGCACCGTGGAATCACTCCAGAAGGTGCAGGAGCAGGTGCACACGCTGCTCAGTCAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS CCA 90 bp TCAAAGGCTTCCGAGTGTCTGAAGCCTCCGTCCTCCTTCGGCCCGTaGGAATCGGACTTCAGCTGGCGGAGCTCTTCCTCCAGTCTCCGG +
Preference number: 5 (lower is better)
Translates to: SKASECLKPPSSFGP*ESDFSWRSSSSSLR
Trigger: CCGGAGACTGGAGGAAGAGCTCCGCCAGCTGAAGTCCGATTCCCACGGGCCGAAGGAGGACGGAGGCTTCAGACACTCGGAAGCCTTTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CAA 90 bp ACAAACGCAGTATGCACGCTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCCAGTATGCACGCTCCTaGCCGACAGGGCTGCCCAGA +
Preference number: 5 (lower is better)
Translates to: TNAVCTLLADRAAQTANLQYARS*PTGLPR
Trigger: TCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTG...GAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTGCGTTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CAA 90 bp AGGGAGGCAGCCCTCAAGCAGCGGATTCCTTTCAAAGAAAGACCCAGGGGCTTCTTGGAGCCCCTTTGTTaGGCCGAGGGCATGGCGGGC +
Preference number: 5 (lower is better)
Translates to: REAALKQRIPFKERPRGFLEPLC*AEGMAG
Trigger: GCCCGCCATGCCCTCGGCCAAACAAAGGGGCTCCAA...GAAGCCCCTGGGTCTTTCTTTGAAAGGAATCCGCTGCTTGAGGGCTGCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CAA 90 bp GATATCACAAGATGCGTCAGGAAGAGAAACGACACGCACACCATGAGGGAGGCAGCGCCGTGGCCGCCCTaGGAGCCCCTTTGTTTGGCC +
Preference number: 5 (lower is better)
Translates to: DITRCVRKRNDTHTMREAAPWPP*EPLCLA
Trigger: GGCCAAACAAAGGGGCTCCAAGGGCGGCCACGGCGC...TGCCTCCCTCATGGTGTGCGTGTCGTTTCTCTTCCTGACGCATCTTGTGATATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CAA 90 bp TCCCCTCCTCATTCAGAGCTGACAGCTATGAGCTTTAACCGGTTCAAAGTGGAACCGCGGTGGCCGCCCTaGCCGTGCGCCTGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: SPPHSELTAMSFNRFKVEPRWPP*PCAWFC
Trigger: GCAGAACCAGGCGCACGGCAAGGGCGGCCACCGCGG...TTCCACTTTGAACCGGTTAAAGCTCATAGCTGTCAGCTCTGAATGAGGAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS TCA 90 bp GTCCCTGACTCTTTTGCTGGAGTGCCTCAAAGGCTTCCGAGTGTCTaGAGCCTCCGTCCTCCTTCGGCCCGTGGGAATCGGACTTCAGCT +
Preference number: 5 (lower is better)
Translates to: VPDSFAGVPQRLPSV*SLRPPSARGNRTSA
Trigger: AGCTGAAGTCCGATTCCCACGGGCCGAAGGAGGACGGAGGCTTCAGACACTCGGAAGCCTTTGAGGCACTCCAGCAAAAGAGTCAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CAA 90 bp GATATCACAAGATGCGTCAGGAAGAGAAACGACACGCACACCATGAGGGAGGCAACGGGCGGCCTGGGCTaGGTCCTGACTGAGCAGCGT +
Preference number: 5 (lower is better)
Translates to: DITRCVRKRNDTHTMREATGGLG*VLTEQR
Trigger: ACGCTGCTCAGTCAGGACCAAGCCCAGGCCGCCCGT...TGCCTCCCTCATGGTGTGCGTGTCGTTTCTCTTCCTGACGCATCTTGTGATATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CAA 90 bp ACAAACGCAGTATGCACGCTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCAAACCTGTGCATTCCTaGGTGACCTCCGGAGAGAGA +
Preference number: 5 (lower is better)
Translates to: TNAVCTLLADRAAQTANLKPVHS*VTSGER
Trigger: TCTCTCTCCGGAGGTCACCAAGGAATGCACAGGTTT...GAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTGCGTTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS CCA 90 bp TTCTCCAGGGACGTGAAGTCCCGCTCCCGGGCGTCCTTCACCACATaGATCCCATCCGAGAGGTCTTTGAGAATCTCATTCTGGAGTTTC +
Preference number: 5 (lower is better)
Translates to: FSRDVKSRSRASFTT*IPSERSLRISFWSF
Trigger: GAAACTCCAGAATGAGATTCTCAAAGACCTCTCGGATGGGATCCATGTGGTGAAGGACGCCCGGGAGCGGGACTTCACGTCCCTGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378026.5
ENST00000552828.5
CDS-3UTR CAA 90 bp TCGAAACCTGTGCATTCCTTGGTGACCTCCGGAGAGAGAACATGGGCCGGCAGTGACCTCACTCTCCCCTaGCTTCACAGCTTTCTCTGT +
Preference number: 5 (lower is better)
Translates to: SKPVHSLVTSGERTWAGSDLTLP*LHSFLC
Trigger: ACAGAGAAAGCTGTGAAGCAAGGGGAGAGTGAGGTC...ACTGCCGGCCCATGTTCTCTCTCCGGAGGTCACCAAGGAATGCACAGGTTTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CAA 90 bp ATCACAAGATGCGTCAGGAAGAGAAACGACACGCACACCATGAGGGAGGCAGCCCAGTCCCTGACTCTTTaGCTGGAGTGCCTCAAAGGC +
Preference number: 5 (lower is better)
Translates to: ITRCVRKRNDTHTMREAAQSLTL*LECLKG
Trigger: GCCTTTGAGGCACTCCAGCAAAAGAGTCAGGGACTG...GGCTGCCTCCCTCATGGTGTGCGTGTCGTTTCTCTTCCTGACGCATCTTGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CAA 90 bp AGATACAGCAAACAATTACACAAACGCAGTATGCACGCTCCTTGCCGACAGGGCTCGTGCTCCTGGCTCTaGGACAGGAGGGACTCCAGG +
Preference number: 5 (lower is better)
Translates to: RYSKQLHKRSMHAPCRQGSCSWL*DRRDSR
Trigger: CCTGGAGTCCCTCCTGTCCAAGAGCCAGGAGCACGA...GCCCTGTCGGCAAGGAGCGTGCATACTGCGTTTGTGTAATTGTTTGCTGTATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS CCA 90 bp CCAGCTGGCATGAGTGATGTTAAATTTGGTGGTCTGGAAGGTGAGTaGCCTCCAGTGTTCTCTCTGGAGGAAGGGAAGCCTTCCTGTGCA +
Preference number: 5 (lower is better)
Translates to: PAGMSDVKFGGLEGE*PPVFSLEEGKPSCA
Trigger: TGCACAGGAAGGCTTCCCTTCCTCCAGAGAGAACACTGGAGGCCACTCACCTTCCAGACCACCAAATTTAACATCACTCATGCCAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553039.1
CDS-3UTR CAA 90 bp TCGAAACCTGTGCATTCCTTGGTGACCTCCGGAGAGAGAACATGGGCCGGCAGTAGTTCCAAATGTGGCTaGCAAAGACTGCACCTTCTG +
Preference number: 5 (lower is better)
Translates to: SKPVHSLVTSGERTWAGSSSKCG*QRLHLL
Trigger: CAGAAGGTGCAGTCTTTGCAAGCCACATTTGGAACT...ACTGCCGGCCCATGTTCTCTCTCCGGAGGTCACCAAGGAATGCACAGGTTTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CAA 90 bp ATCACAAGATGCGTCAGGAAGAGAAACGACACGCACACCATGAGGGAGGCAGCCATGGCGATGTTGTCGTaGATGGATTTGGTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: ITRCVRKRNDTHTMREAAMAMLS*MDLVSS
Trigger: GGAGCTCACCAAATCCATCAACGACAACATCGCCAT...GGCTGCCTCCCTCATGGTGTGCGTGTCGTTTCTCTTCCTGACGCATCTTGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CAA 90 bp TCGAAACCTGTGCATTCCTTGGTGACCTCCGGAGAGAGAACATGGGCCGGCAGTGAGGTCTTGTTTATGTaGGGAGCTTCTCAAGATGGA +
Preference number: 5 (lower is better)
Translates to: SKPVHSLVTSGERTWAGSEVLFM*GASQDG
Trigger: TCCATCTTGAGAAGCTCCCAACATAAACAAGACCTC...ACTGCCGGCCCATGTTCTCTCTCCGGAGGTCACCAAGGAATGCACAGGTTTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CAA 90 bp CTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCTTCATGGACATCATGTTACCATCCGAGAGGTCTTaGAGAATCTCATTCTGGAGT +
Preference number: 5 (lower is better)
Translates to: LLADRAAQTANLFMDIMLPSERS*RISFWS
Trigger: ACTCCAGAATGAGATTCTCAAAGACCTCTCGGATGG...TAACATGATGTCCATGAAGAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CAA 90 bp ATCACAAGATGCGTCAGGAAGAGAAACGACACGCACACCATGAGGGAGGCAGCCGCTTTCAAATCCTGCTaGTTCCCCTCAGATTCTTCC +
Preference number: 5 (lower is better)
Translates to: ITRCVRKRNDTHTMREAAAFKSC*FPSDSS
Trigger: GGAAGAATCTGAGGGGAACAAGCAGGATTTGAAAGC...GGCTGCCTCCCTCATGGTGTGCGTGTCGTTTCTCTTCCTGACGCATCTTGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CAA 90 bp AGATACAGCAAACAATTACACAAACGCAGTATGCACGCTCCTTGCCGACAGGGCTCCCACTCTCTGGACTaGGCTGAGGTCTGTATCTCC +
Preference number: 5 (lower is better)
Translates to: RYSKQLHKRSMHAPCRQGSHSLD*AEVCIS
Trigger: GGAGATACAGACCTCAGCCAAGTCCAGAGAGTGGGA...GCCCTGTCGGCAAGGAGCGTGCATACTGCGTTTGTGTAATTGTTTGCTGTATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CAA 90 bp CAGTATGCACGCTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCTTCATGGTTGGCTGATTCCAGATaGTTCTCGTTGGTTTCTATT +
Preference number: 5 (lower is better)
Translates to: QYARSLPTGLPRRQTSSWLADSR*FSLVSI
Trigger: AATAGAAACCAACGAGAACAATCTGGAATCAGCCAA...CCATGAAGAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAGCGTGCATACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CAA 90 bp TCCCCTCCTCATTCAGAGCTGACAGCTATGAGCTTTAACCGGTTCAAAGTGGAATTGTCGTTGATGGATTaGGTGAGCTCCGTCAGCCGC +
Preference number: 5 (lower is better)
Translates to: SPPHSELTAMSFNRFKVELSLMD*VSSVSR
Trigger: GCGGCTGACGGAGCTCACCAAATCCATCAACGACAA...TTCCACTTTGAACCGGTTAAAGCTCATAGCTGTCAGCTCTGAATGAGGAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CAA 90 bp TCGAAACCTGTGCATTCCTTGGTGACCTCCGGAGAGAGAACATGGGCCGGCAGTTCCAGATTGTTCTCGTaGGTTTCTATTTTGACCGAG +
Preference number: 5 (lower is better)
Translates to: SKPVHSLVTSGERTWAGSSRLFS*VSILTE
Trigger: CTCGGTCAAAATAGAAACCAACGAGAACAATCTGGA...ACTGCCGGCCCATGTTCTCTCTCCGGAGGTCACCAAGGAATGCACAGGTTTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS GCA 90 bp CAAATCCTGCTTGTTCCCCTCAGATTCTTCCAGGGAGGCAACCTTTaGCTTCATGTCATTGATCTCCTTCTGGCTCCTCTTCTGGACTTC +
Preference number: 5 (lower is better)
Translates to: QILLVPLRFFQGGNL*LHVIDLLLAPLLDF
Trigger: GAAGTCCAGAAGAGGAGCCAGAAGGAGATCAATGACATGAAGGCAAAGGTTGCCTCCCTGGAAGAATCTGAGGGGAACAAGCAGGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378026.5
ENST00000552828.5
CDS-3UTR CAA 90 bp CTCCTTGCCGACAGGGCTGCCCAGACGGCAAACCTCTTCATGGACATCATGTTATTTCTCTGTGAGGTCTaGTTTATGTTGGGAGCTTCT +
Preference number: 5 (lower is better)
Translates to: LLADRAAQTANLFMDIMLFLCEV*FMLGAS
Trigger: AGAAGCTCCCAACATAAACAAGACCTCACAGAGAAA...TAACATGATGTCCATGAAGAGGTTTGCCGTCTGGGCAGCCCTGTCGGCAAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS-3UTR CAA 90 bp AGATACAGCAAACAATTACACAAACGCAGTATGCACGCTCCTTGCCGACAGGGCTTTGCCTTCATGTCATaGATCTCCTTCTGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: RYSKQLHKRSMHAPCRQGFAFMS*ISFWLL
Trigger: GAGGAGCCAGAAGGAGATCAATGACATGAAGGCAAA...GCCCTGTCGGCAAGGAGCGTGCATACTGCGTTTGTGTAATTGTTTGCTGTATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS CCA 90 bp GCAACCTTTGCCTTCATGTCATTGATCTCCTTCTGGCTCCTCTTCTaGACTTCTGTGAAGATGGCGATGTTGTCGTTGATGGATTTGGTG +
Preference number: 5 (lower is better)
Translates to: ATFAFMSLISFWLLF*TSVKMAMLSLMDLV
Trigger: CACCAAATCCATCAACGACAACATCGCCATCTTCACAGAAGTCCAGAAGAGGAGCCAGAAGGAGATCAATGACATGAAGGCAAAGGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378026.5
ENST00000552828.5
CDS CCA 90 bp CTCTCCCCTTGCTTCACAGCTTTCTCTGTGAGGTCTTGTTTATGTTaGGAGCTTCTCAAGATGGACTCAAAAGTTCCAAATGTGGCTTGC +
Preference number: 5 (lower is better)
Translates to: LSPCFTAFSVRSCLC*ELLKMDSKVPNVAC
Trigger: GCAAGCCACATTTGGAACTTTTGAGTCCATCTTGAGAAGCTCCCAACATAAACAAGACCTCACAGAGAAAGCTGTGAAGCAAGGGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378026.5
ENST00000552828.5
CDS-3UTR CAA 90 bp GATATCACAAGATGCGTCAGGAAGAGAAACGACACGCACACCATGAGGGAGGCATCGTTGGTTTCTATTTaGACCGAGTATGCAACCAAA +
Preference number: 5 (lower is better)
Translates to: DITRCVRKRNDTHTMREASLVSI*TEYATK
Trigger: TTTGGTTGCATACTCGGTCAAAATAGAAACCAACGA...TGCCTCCCTCATGGTGTGCGTGTCGTTTCTCTTCCTGACGCATCTTGTGATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS CAA 90 bp CTTCTCCGAGGGGCTCGCGGCGCCGTGGCCGCCCTTGGAGCCCCTTaGTTTGGCCGAGGGCATGGCGGGCGCGGCGGCGGCTCGGGCCGC +
Preference number: 6 (lower is better)
Translates to: LLRGARGAVAALGAP*FGRGHGGRGGGSGR
Trigger: GCGGCCCGAGCCGCCGCCGCGCCCGCCATGCCCTCGGCCAAACAAAGGGGCTCCAAGGGCGGCCACGGCGCCGCGAGCCCCTCGGAGAAG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS CAA 90 bp GAGGAGGACTTGCCGCCGCCGCCGCCGCCGCCGCGGTGGCCGCCCTaGCCGTGCGCCTGGTTCTGCGGGTGCTGCTGCGGGTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: EEDLPPPPPPPRWPP*PCAWFCGCCCGCCC
Trigger: GCAGCAGCACCCGCAGCAGCACCCGCAGAACCAGGCGCACGGCAAGGGCGGCCACCGCGGCGGCGGCGGCGGCGGCGGCAAGTCCTCCTC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS CCA 72 bp CGCGGCCCGGGAAACTTGCAGGGGCTCCCCCGGGACTaGGCGAGCGGCACGCGGGCGCTGCTGGCGTCGGAG +
Preference number: 6 (lower is better)
Translates to: RGPGNLQGLPRD*ASGTRALLASE
Trigger: CTCCGACGCCAGCAGCGCCCGCGTGCCGCTCGCCCAGTCCCGGGGGAGCCCCTGCAAGTTTCCCGGGCCGCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS CCA 72 bp GGCTTCTTCGCCACGTCATCCGCGCCGCCCGACGGGTaGGCACCCTTCTCCGAGGGGCTCGCGGCGCCGTGG +
Preference number: 6 (lower is better)
Translates to: GFFATSSAPPDG*APFSEGLAAPW
Trigger: CCACGGCGCCGCGAGCCCCTCGGAGAAGGGTGCCCACCCGTCGGGCGGCGCGGATGACGTGGCGAAGAAGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS CCA 72 bp CCTTCTCCGAGGGGCTCGCGGCGCCGTGGCCGCCCTTaGAGCCCCTTTGTTTGGCCGAGGGCATGGCGGGCG +
Preference number: 6 (lower is better)
Translates to: PSPRGSRRRGRP*SPFVWPRAWRA
Trigger: CGCCCGCCATGCCCTCGGCCAAACAAAGGGGCTCCAAGGGCGGCCACGGCGCCGCGAGCCCCTCGGAGAAGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS CCA 72 bp GGGTGGGCACCCTTCTCCGAGGGGCTCGCGGCGCCGTaGCCGCCCTTGGAGCCCCTTTGTTTGGCCGAGGGC +
Preference number: 6 (lower is better)
Translates to: GWAPFSEGLAAP*PPLEPLCLAEG
Trigger: GCCCTCGGCCAAACAAAGGGGCTCCAAGGGCGGCCACGGCGCCGCGAGCCCCTCGGAGAAGGGTGCCCACCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS CCA 72 bp CTGCGCCGGACCTGCTGGACCTCCTCCAGGACGTGGTaGACGCACCAGCCCGAGAAAGCGGCCGCCGCCACC +
Preference number: 6 (lower is better)
Translates to: LRRTCWTSSRTW*THQPEKAAAAT
Trigger: GGTGGCGGCGGCCGCTTTCTCGGGCTGGTGCGTCCACCACGTCCTGGAGGAGGTCCAGCAGGTCCGGCGCAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS TCA 72 bp CGGCCGCCGCCACCAGGGCGAGGTAGAAGAGAAAGTTaGGCGCCCTGCCGAGCCTGCGCGAGCAGGACGCCG +
Preference number: 6 (lower is better)
Translates to: RPPPPGRGRRES*APCRACASRTP
Trigger: CGGCGTCCTGCTCGCGCAGGCTCGGCAGGGCGCTCAACTTTCTCTTCTACCTCGCCCTGGTGGCGGCGGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS CCA 72 bp TGCCGGGAGAAGTCCTGGTGGCTGCGCCGGACCTGCTaGACCTCCTCCAGGACGTGGTGGACGCACCAGCCC +
Preference number: 6 (lower is better)
Translates to: CREKSWWLRRTC*TSSRTWWTHQP
Trigger: GGGCTGGTGCGTCCACCACGTCCTGGAGGAGGTCCAGCAGGTCCGGCGCAGCCACCAGGACTTCTCCCGGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS CCA 72 bp TGGCCCAGCTCCTCCCTCTGCCGGGAGAAGTCCTGGTaGCTGCGCCGGACCTGCTGGACCTCCTCCAGGACG +
Preference number: 6 (lower is better)
Translates to: WPSSSLCREKSW*LRRTCWTSSRT
Trigger: CGTCCTGGAGGAGGTCCAGCAGGTCCGGCGCAGCCACCAGGACTTCTCCCGGCAGAGGGAGGAGCTGGGCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS GCA 72 bp GCGAGCCGCTCCGTGTCGGCCGCCTCCTTGAAAGCCTaGTGCTCCTGCTTGAGGCTCACCAGCTCGCGGACC +
Preference number: 6 (lower is better)
Translates to: ASRSVSAASLKA*CSCLRLTSSRT
Trigger: GGTCCGCGAGCTGGTGAGCCTCAAGCAGGAGCAGCAGGCTTTCAAGGAGGCGGCCGACACGGAGCGGCTCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS GCA 72 bp AGCCGCTCCGTGTCGGCCGCCTCCTTGAAAGCCTGCTaGTCCTGCTTGAGGCTCACCAGCTCGCGGACCTCG +
Preference number: 6 (lower is better)
Translates to: SRSVSAASLKAC*SCLRLTSSRTS
Trigger: CGAGGTCCGCGAGCTGGTGAGCCTCAAGCAGGAGCAGCAGGCTTTCAAGGAGGCGGCCGACACGGAGCGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS TCA 72 bp CCGTCAGCCGCTCCTCCACCGTGTTCTCCAGGGACGTaGAGTCCCGCTCCCGGGCGTCCTTCACCACATGGA +
Preference number: 6 (lower is better)
Translates to: PSAAPPPCSPGT*SPAPGRPSPHG
Trigger: TCCATGTGGTGAAGGACGCCCGGGAGCGGGACTTCACGTCCCTGGAGAACACGGTGGAGGAGCGGCTGACGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378026.5
ENST00000552828.5
CDS CCA 72 bp TCCGAGTGTCTGAAGCCTCCGTCCTCCTTCGGCCCGTaGGAATCGGACTTCAGCTGGCGGAGCTCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: SECLKPPSSFGP*ESDFSWRSSSS
Trigger: GGAGGAAGAGCTCCGCCAGCTGAAGTCCGATTCCCACGGGCCGAAGGAGGACGGAGGCTTCAGACACTCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS GCA 72 bp GCACCTGCTCCTGCACCTTCTGGAGTGATTCCACGGTaGTGGGGAGCTCGCCCACACTCCTCTTCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: APAPAPSGVIPR*WGARPHSSSAP
Trigger: AGGAGCTGAAGAGGAGTGTGGGCGAGCTCCCCAGCACCGTGGAATCACTCCAGAAGGTGCAGGAGCAGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS CCA 72 bp CCTGCTCCTGCACCTTCTGGAGTGATTCCACGGTGCTaGGGAGCTCGCCCACACTCCTCTTCAGCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: PAPAPSGVIPRC*GARPHSSSAPP
Trigger: TGGAGGAGCTGAAGAGGAGTGTGGGCGAGCTCCCCAGCACCGTGGAATCACTCCAGAAGGTGCAGGAGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS TCA 72 bp TCTTTTGCTGGAGTGCCTCAAAGGCTTCCGAGTGTCTaGAGCCTCCGTCCTCCTTCGGCCCGTGGGAATCGG +
Preference number: 6 (lower is better)
Translates to: SFAGVPQRLPSV*SLRPPSARGNR
Trigger: CCGATTCCCACGGGCCGAAGGAGGACGGAGGCTTCAGACACTCGGAAGCCTTTGAGGCACTCCAGCAAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS CCA 72 bp GACGTGAAGTCCCGCTCCCGGGCGTCCTTCACCACATaGATCCCATCCGAGAGGTCTTTGAGAATCTCATTC +
Preference number: 6 (lower is better)
Translates to: DVKSRSRASFTT*IPSERSLRISF
Trigger: GAATGAGATTCTCAAAGACCTCTCGGATGGGATCCATGTGGTGAAGGACGCCCGGGAGCGGGACTTCACGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378026.5
ENST00000552828.5
CDS CAA 90 bp CTCTTCTGGACTTCTGTGAAGATGGCGATGTTGTCGTTGATGGATTaGGTGAGCTCCGTCAGCCGCTCCTCCACCGTGTTCTCCAGGGAC +
Preference number: 6 (lower is better)
Translates to: LFWTSVKMAMLSLMD*VSSVSRSSTVFSRD
Trigger: GTCCCTGGAGAACACGGTGGAGGAGCGGCTGACGGAGCTCACCAAATCCATCAACGACAACATCGCCATCTTCACAGAAGTCCAGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378026.5
ENST00000552828.5
CDS CCA 72 bp GTGGTCTGGAAGGTGAGTGGCCTCCAGTGTTCTCTCTaGAGGAAGGGAAGCCTTCCTGTGCACAAGTTTCAC +
Preference number: 6 (lower is better)
Translates to: VVWKVSGLQCSL*RKGSLPVHKFH
Trigger: GTGAAACTTGTGCACAGGAAGGCTTCCCTTCCTCCAGAGAGAACACTGGAGGCCACTCACCTTCCAGACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553039.1
CDS CAA 90 bp TTCTGGCTCCTCTTCTGGACTTCTGTGAAGATGGCGATGTTGTCGTaGATGGATTTGGTGAGCTCCGTCAGCCGCTCCTCCACCGTGTTC +
Preference number: 6 (lower is better)
Translates to: FWLLFWTSVKMAMLS*MDLVSSVSRSSTVF
Trigger: GAACACGGTGGAGGAGCGGCTGACGGAGCTCACCAAATCCATCAACGACAACATCGCCATCTTCACAGAAGTCCAGAAGAGGAGCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378026.5
ENST00000552828.5
CDS CAA 72 bp ACTTCTGTGAAGATGGCGATGTTGTCGTTGATGGATTaGGTGAGCTCCGTCAGCCGCTCCTCCACCGTGTTC +
Preference number: 6 (lower is better)
Translates to: TSVKMAMLSLMD*VSSVSRSSTVF
Trigger: GAACACGGTGGAGGAGCGGCTGACGGAGCTCACCAAATCCATCAACGACAACATCGCCATCTTCACAGAAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378026.5
ENST00000552828.5
CDS CAA 72 bp CTCTTCTGGACTTCTGTGAAGATGGCGATGTTGTCGTaGATGGATTTGGTGAGCTCCGTCAGCCGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: LFWTSVKMAMLS*MDLVSSVSRSS
Trigger: GGAGGAGCGGCTGACGGAGCTCACCAAATCCATCAACGACAACATCGCCATCTTCACAGAAGTCCAGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378026.5
ENST00000552828.5
CDS CAA 90 bp TTCCCCTCAGATTCTTCCAGGGAGGCAACCTTTGCCTTCATGTCATaGATCTCCTTCTGGCTCCTCTTCTGGACTTCTGTGAAGATGGCG +
Preference number: 6 (lower is better)
Translates to: FPSDSSREATFAFMS*ISFWLLFWTSVKMA
Trigger: CGCCATCTTCACAGAAGTCCAGAAGAGGAGCCAGAAGGAGATCAATGACATGAAGGCAAAGGTTGCCTCCCTGGAAGAATCTGAGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378026.5
ENST00000552828.5
CDS GCA 72 bp TCCAGTGTTCTCTCTGGAGGAAGGGAAGCCTTCCTGTaGACAAGTTTCACTCCTGTAATCCCAGCTACTTCG +
Preference number: 6 (lower is better)
Translates to: SSVLSGGREAFL*TSFTPVIPATS
Trigger: CGAAGTAGCTGGGATTACAGGAGTGAAACTTGTGCACAGGAAGGCTTCCCTTCCTCCAGAGAGAACACTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553039.1
CDS CCA 72 bp GGGAGCTTCTCAAGATGGACTCAAAAGTTCCAAATGTaGCTTGCAAAGACTGCACCTTCTGCTCGACGCCCT +
Preference number: 6 (lower is better)
Translates to: GSFSRWTQKFQM*LAKTAPSARRP
Trigger: AGGGCGTCGAGCAGAAGGTGCAGTCTTTGCAAGCCACATTTGGAACTTTTGAGTCCATCTTGAGAAGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS GCA 72 bp CTTGTTCCCCTCAGATTCTTCCAGGGAGGCAACCTTTaGCTTCATGTCATTGATCTCCTTCTGGCTCCTCTT +
Preference number: 6 (lower is better)
Translates to: LVPLRFFQGGNL*LHVIDLLLAPL
Trigger: AAGAGGAGCCAGAAGGAGATCAATGACATGAAGGCAAAGGTTGCCTCCCTGGAAGAATCTGAGGGGAACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378026.5
ENST00000552828.5
CDS CCA 72 bp ATGAGTGATGTTAAATTTGGTGGTCTGGAAGGTGAGTaGCCTCCAGTGTTCTCTCTGGAGGAAGGGAAGCCT +
Preference number: 6 (lower is better)
Translates to: MSDVKFGGLEGE*PPVFSLEEGKP
Trigger: AGGCTTCCCTTCCTCCAGAGAGAACACTGGAGGCCACTCACCTTCCAGACCACCAAATTTAACATCACTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553039.1
CDS CAA 72 bp GCTTCTCAAGATGGACTCAAAAGTTCCAAATGTGGCTaGCAAAGACTGCACCTTCTGCTCGACGCCCTGCAA +
Preference number: 6 (lower is better)
Translates to: ASQDGLKSSKCG*QRLHLLLDALQ
Trigger: TTGCAGGGCGTCGAGCAGAAGGTGCAGTCTTTGCAAGCCACATTTGGAACTTTTGAGTCCATCTTGAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378026.5
CDS CAA 72 bp GATTCTTCCAGGGAGGCAACCTTTGCCTTCATGTCATaGATCTCCTTCTGGCTCCTCTTCTGGACTTCTGTG +
Preference number: 6 (lower is better)
Translates to: DSSREATFAFMS*ISFWLLFWTSV
Trigger: CACAGAAGTCCAGAAGAGGAGCCAGAAGGAGATCAATGACATGAAGGCAAAGGTTGCCTCCCTGGAAGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378026.5
ENST00000552828.5
CDS CAA 90 bp GTCTGTATCTCCTTCACAGCTTCCTTTAAGGCTTTCAAATCCTGCTaGTTCCCCTCAGATTCTTCCAGGGAGGCAACCTTTGCCTTCATG +
Preference number: 6 (lower is better)
Translates to: VCISFTASFKAFKSC*FPSDSSREATFAFM
Trigger: CATGAAGGCAAAGGTTGCCTCCCTGGAAGAATCTGAGGGGAACAAGCAGGATTTGAAAGCCTTAAAGGAAGCTGTGAAGGAGATACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378026.5
ENST00000552828.5
CDS CCA 72 bp GGGAGCTTCTCAAGATGGACTCAAAAGTTCCAAATGTaGCTTGCAAAGACTGCACCTGTAATCCCAGCTACT +
Preference number: 6 (lower is better)
Translates to: GSFSRWTQKFQM*LAKTAPVIPAT
Trigger: AGTAGCTGGGATTACAGGTGCAGTCTTTGCAAGCCACATTTGGAACTTTTGAGTCCATCTTGAGAAGCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552828.5
CDS CAA 90 bp ACTCTCCCCTTGCTTCACAGCTTTCTCTGTGAGGTCTTGTTTATGTaGGGAGCTTCTCAAGATGGACTCAAAAGTTCCAAATGTGGCTTG +
Preference number: 6 (lower is better)
Translates to: TLPLLHSFLCEVLFM*GASQDGLKSSKCGL
Trigger: CAAGCCACATTTGGAACTTTTGAGTCCATCTTGAGAAGCTCCCAACATAAACAAGACCTCACAGAGAAAGCTGTGAAGCAAGGGGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378026.5
ENST00000552828.5
CDS CAA 72 bp ACTCTCCCCTTGCTTCACAGCTTTCTCTGTGAGGTCTaGTTTATGTTGGGAGCTTCTCAAGATGGACTCAAA +
Preference number: 6 (lower is better)
Translates to: TLPLLHSFLCEV*FMLGASQDGLK
Trigger: TTTGAGTCCATCTTGAGAAGCTCCCAACATAAACAAGACCTCACAGAGAAAGCTGTGAAGCAAGGGGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378026.5
ENST00000552828.5
CDS CCA 72 bp TGCTTCACAGCTTTCTCTGTGAGGTCTTGTTTATGTTaGGAGCTTCTCAAGATGGACTCAAAAGTTCCAAAT +
Preference number: 6 (lower is better)
Translates to: CFTAFSVRSCLC*ELLKMDSKVPN
Trigger: ATTTGGAACTTTTGAGTCCATCTTGAGAAGCTCCCAACATAAACAAGACCTCACAGAGAAAGCTGTGAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378026.5
ENST00000552828.5
CDS CAA 72 bp TTGCTTCACAGCTTTCTCTGTGAGGTCTTGTTTATGTaGGGAGCTTCTCAAGATGGACTCAAAAGTTCCAAA +
Preference number: 6 (lower is better)
Translates to: LLHSFLCEVLFM*GASQDGLKSSK
Trigger: TTTGGAACTTTTGAGTCCATCTTGAGAAGCTCCCAACATAAACAAGACCTCACAGAGAAAGCTGTGAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378026.5
ENST00000552828.5