Pregenerated sensors for CITED4 (Homo sapiens)
Ensembl gene IDs: ENSG00000179862Ensembl transcript IDs: ENST00000372638.4
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAAGGCCTGGAGGGACGCCAGGGTCCCAGTCCGGTGCCGGGCCCTaGGCACACAGCCGCCGCCTCCACCCTCGCGGAGGGCGCGCGCGG | + |
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Preference number: 1 (lower is better) Translates to: ARPGGTPGSQSGAGP*AHSRRLHPRGGRAR Trigger: CCGCGCGCGCCCTCCGCGAGGGTGGAGGCGGCGGCTGTGTGCGCAGGGCCCGGCACCGGACTGGGACCCTGGCGTCCCTCCAGGCCTTGC 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| 3UTR CCA 90 bp | CCGCCGCCTCCACCCTCGCGGAGGGCGCGCGCGGGGCCCAGTCGCTaGGTGCAGGGTCCGGCGGGCAGTCGGGCCCTTTCTCCTCTCCGG | + |
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Preference number: 1 (lower is better) Translates to: PPPPPSRRARAGPSR*VQGPAGSRALSPLR Trigger: CCGGAGAGGAGAAAGGGCCCGACTGCCCGCCGGACCCTGCACCCAGCGACTGGGCCCCGCGCGCGCCCTCCGCGAGGGTGGAGGCGGCGG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| 3UTR GCA 90 bp | CGCCTCCACCCTCGCGGAGGGCGCGCGCGGGGCCCAGTCGCTGGGTaGAGGGTCCGGCGGGCAGTCGGGCCCTTTCTCCTCTCCGGCACG | + |
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Preference number: 1 (lower is better) Translates to: RLHPRGGRARGPVAG*RVRRAVGPFLLSGT Trigger: CGTGCCGGAGAGGAGAAAGGGCCCGACTGCCCGCCGGACCCTGCACCCAGCGACTGGGCCCCGCGCGCGCCCTCCGCGAGGGTGGAGGCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| 3UTR TCA 90 bp | GGTCCGGTCTCTTTCACTTTACGGCCGAGGCTGGGGTCAGAGAAGTaGAGCCAAACTGTCCTCCCGCAGGAGGCAAGGCCTGGAGGGACG | + |
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Preference number: 1 (lower is better) Translates to: GPVSFTLRPRLGSEK*SQTVLPQEARPGGT Trigger: CGTCCCTCCAGGCCTTGCCTCCTGCGGGAGGACAGTTTGGCTTCACTTCTCTGACCCCAGCCTCGGCCGTAAAGTGAAAGAGACCGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| 3UTR TCA 90 bp | CGGCGAGGGGGAGAGGACACGATCCAAGAACCAGAGTCCGAAAGCTaGAGCTGGTCCGGTCTCTTTCACTTTACGGCCGAGGCTGGGGTC | + |
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Preference number: 1 (lower is better) Translates to: RRGGEDTIQEPESES*SWSGLFHFTAEAGV Trigger: GACCCCAGCCTCGGCCGTAAAGTGAAAGAGACCGGACCAGCTTCAGCTTTCGGACTCTGGTTCTTGGATCGTGTCCTCTCCCCCTCGCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| 3UTR-3UTR CCA 90 bp | GGAGGCCAGACAGGGCATTGCTCCACGGGTTCGGGCTGTACAACCTTCCCCTCCGGGAGGCTCAGGAGATaGTGGCTCTGGGGACCCGAT | + |
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Preference number: 2 (lower is better) Translates to: GGQTGHCSTGSGCTTFPSGRLRR*WLWGPD Trigger: ATCGGGTCCCCAGAGCCACCATCTCCTGAGCCTCCC...GGAGGGGAAGGTTGTACAGCCCGAACCCGTGGAGCAATGCCCTGTCTGGCCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| 3UTR-3UTR GCA 90 bp | AAGAACCAGAGTCCGAAAGCTGAAGCTGGTCCGGTCTCTTTCACTTTACGGCCGGGCCCAGTCGCTGGGTaGAGGGTCCGGCGGGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: KNQSPKAEAGPVSFTLRPGPVAG*RVRRAV Trigger: GACTGCCCGCCGGACCCTGCACCCAGCGACTGGGCC...CGGCCGTAAAGTGAAAGAGACCGGACCAGCTTCAGCTTTCGGACTCTGGTTCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| 3UTR-3UTR GCA 90 bp | TCCGGTCTCTTTCACTTTACGGCCGAGGCTGGGGTCAGAGAAGTGAAGCCAAACAGGGTCCCAGTCCGGTaGCGGGCCCTGCGCACACAG | + |
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Preference number: 2 (lower is better) Translates to: SGLFHFTAEAGVREVKPNRVPVR*RALRTQ Trigger: CTGTGTGCGCAGGGCCCGGCACCGGACTGGGACCCT...GTTTGGCTTCACTTCTCTGACCCCAGCCTCGGCCGTAAAGTGAAAGAGACCGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| 3UTR-3UTR TCA 90 bp | TTGCTCCACGGGTTCGGGCTGTACAACCTTCCCCTCCTTGAGGTGGGAGGCCCACTGGGGTCAGAGAAGTaGAGCCAAACTGTCCTCCCG | + |
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Preference number: 2 (lower is better) Translates to: LLHGFGLYNLPLLEVGGPLGSEK*SQTVLP Trigger: CGGGAGGACAGTTTGGCTTCACTTCTCTGACCCCAG...TGGGCCTCCCACCTCAAGGAGGGGAAGGTTGTACAGCCCGAACCCGTGGAGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| 3UTR-3UTR CCA 90 bp | TCCGGTCTCTTTCACTTTACGGCCGAGGCTGGGGTCAGAGAAGTGAAGCCAAACGCAGGAGGCAAGGCCTaGAGGGACGCCAGGGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: SGLFHFTAEAGVREVKPNAGGKA*RDARVP Trigger: TGGGACCCTGGCGTCCCTCCAGGCCTTGCCTCCTGC...GTTTGGCTTCACTTCTCTGACCCCAGCCTCGGCCGTAAAGTGAAAGAGACCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| 3UTR-3UTR TCA 90 bp | GACAGGGCATTGCTCCACGGGTTCGGGCTGTACAACCTTCCCCTCCTTGAGGTGCCAGAGTCCGAAAGCTaGAGCTGGTCCGGTCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: DRALLHGFGLYNLPLLEVPESES*SWSGLF Trigger: AAAGAGACCGGACCAGCTTCAGCTTTCGGACTCTGG...CACCTCAAGGAGGGGAAGGTTGTACAGCCCGAACCCGTGGAGCAATGCCCTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| 3UTR GCA 72 bp | CCTCGCGGAGGGCGCGCGCGGGGCCCAGTCGCTGGGTaGAGGGTCCGGCGGGCAGTCGGGCCCTTTCTCCTC | + |
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Preference number: 3 (lower is better) Translates to: PRGGRARGPVAG*RVRRAVGPFLL Trigger: GAGGAGAAAGGGCCCGACTGCCCGCCGGACCCTGCACCCAGCGACTGGGCCCCGCGCGCGCCCTCCGCGAGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| 3UTR GCA 72 bp | GGAGGGACGCCAGGGTCCCAGTCCGGTGCCGGGCCCTaGGCACACAGCCGCCGCCTCCACCCTCGCGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: GGTPGSQSGAGP*AHSRRLHPRGG Trigger: CCCTCCGCGAGGGTGGAGGCGGCGGCTGTGTGCGCAGGGCCCGGCACCGGACTGGGACCCTGGCGTCCCTCC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| 3UTR TCA 72 bp | TCTTTCACTTTACGGCCGAGGCTGGGGTCAGAGAAGTaGAGCCAAACTGTCCTCCCGCAGGAGGCAAGGCCT | + |
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Preference number: 3 (lower is better) Translates to: SFTLRPRLGSEK*SQTVLPQEARP Trigger: AGGCCTTGCCTCCTGCGGGAGGACAGTTTGGCTTCACTTCTCTGACCCCAGCCTCGGCCGTAAAGTGAAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| 3UTR CCA 72 bp | AAGCTGGTCCGGTCTCTTTCACTTTACGGCCGAGGCTaGGGTCAGAGAAGTGAAGCCAAACTGTCCTCCCGC | + |
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Preference number: 3 (lower is better) Translates to: KLVRSLSLYGRG*GQRSEAKLSSR Trigger: GCGGGAGGACAGTTTGGCTTCACTTCTCTGACCCCAGCCTCGGCCGTAAAGTGAAAGAGACCGGACCAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| 3UTR TCA 72 bp | GGAGAGGACACGATCCAAGAACCAGAGTCCGAAAGCTaGAGCTGGTCCGGTCTCTTTCACTTTACGGCCGAG | + |
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Preference number: 3 (lower is better) Translates to: GEDTIQEPESES*SWSGLFHFTAE Trigger: CTCGGCCGTAAAGTGAAAGAGACCGGACCAGCTTCAGCTTTCGGACTCTGGTTCTTGGATCGTGTCCTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS-3UTR GCA 90 bp | AGGGACGCCAGGGTCCCAGTCCGGTGCCGGGCCCTGCGCACACAGCCGCCGCCTCACTACTGCGCACCTTaGGGCCGCAGCCTGGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: RDARVPVRCRALRTQPPPHYCAP*GRSLGS Trigger: TGACCCCAGGCTGCGGCCGCAAGGTGCGCAGTAGTG...AGGCGGCGGCTGTGTGCGCAGGGCCCGGCACCGGACTGGGACCCTGGCGTCCCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS-3UTR GCA 90 bp | TTGCTCCACGGGTTCGGGCTGTACAACCTTCCCCTCCTTGAGGTGGGAGGCCCAGAGACCCGGGCACCGTaGGGTCCCTGCAGCTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: LLHGFGLYNLPLLEVGGPETRAP*GPCSSA Trigger: GGCCGAGCTGCAGGGACCGCACGGTGCCCGGGTCTC...TGGGCCTCCCACCTCAAGGAGGGGAAGGTTGTACAGCCCGAACCCGTGGAGCAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS-3UTR CCA 90 bp | GGAGGCCAGACAGGGCATTGCTCCACGGGTTCGGGCTGTACAACCTTCCCCTCCTCGGCGAGCATCAGGTaGTCGGCCATGGCGGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: GGQTGHCSTGSGCTTFPSSASIR*SAMAAG Trigger: GCCTGCCGCCATGGCCGACCACCTGATGCTCGCCGA...GGAGGGGAAGGTTGTACAGCCCGAACCCGTGGAGCAATGCCCTGTCTGGCCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS-3UTR GCA 90 bp | GGCGGCGAGGGGGAGAGGACACGATCCAAGAACCAGAGTCCGAAAGCTGAAGCTAGCTCGCGCACGCGGTaGAGCCCGAGCTCCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GGEGERTRSKNQSPKAEASSRTR*SPSSSS Trigger: GGAGCTGGAGCTCGGGCTGCACCGCGTGCGCGAGCT...AGCTTCAGCTTTCGGACTCTGGTTCTTGGATCGTGTCCTCTCCCCCTCGCCGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS-3UTR GCA 90 bp | TTGCTCCACGGGTTCGGGCTGTACAACCTTCCCCTCCTTGAGGTGGGAGGCCCAACCAAACCCGACTGGTaGCCCGGCCCAGCCCACTAC | + |
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Preference number: 4 (lower is better) Translates to: LLHGFGLYNLPLLEVGGPTKPDW*PGPAHY Trigger: GTAGTGGGCTGGGCCGGGGCACCAGTCGGGTTTGGT...TGGGCCTCCCACCTCAAGGAGGGGAAGGTTGTACAGCCCGAACCCGTGGAGCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS-3UTR GCA 90 bp | AAAGCTGAAGCTGGTCCGGTCTCTTTCACTTTACGGCCGAGGCTGGGGTCAGAGGGCGTCGCCACAGGCTaGAGGTGCGCGATGCCCGCG | + |
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Preference number: 4 (lower is better) Translates to: KAEAGPVSFTLRPRLGSEGVATG*RCAMPA Trigger: CGCGGGCATCGCGCACCTGCAGCCTGTGGCGACGCC...CTCTGACCCCAGCCTCGGCCGTAAAGTGAAAGAGACCGGACCAGCTTCAGCTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS-3UTR CCA 90 bp | GGAGGCCAGACAGGGCATTGCTCCACGGGTTCGGGCTGTACAACCTTCCCCTCCAAAACCAAACCCGACTaGTGCCCCGGCCCAGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: GGQTGHCSTGSGCTTFPSKTKPD*CPGPAH Trigger: GTGGGCTGGGCCGGGGCACCAGTCGGGTTTGGTTTT...GGAGGGGAAGGTTGTACAGCCCGAACCCGTGGAGCAATGCCCTGTCTGGCCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS-3UTR CCA 90 bp | CTGGTCCGGTCTCTTTCACTTTACGGCCGAGGCTGGGGTCAGAGAAGTGAAGCCACGGCCGGAAAGGGCTaGAAGGAGGACGGCGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: LVRSLSLYGRGWGQRSEATAGKG*KEDGGP Trigger: CGGGCCGCCGTCCTCCTTCCAGCCCTTTCCGGCCGT...GGCTTCACTTCTCTGACCCCAGCCTCGGCCGTAAAGTGAAAGAGACCGGACCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS-3UTR GCA 90 bp | TCCGGTCTCTTTCACTTTACGGCCGAGGCTGGGGTCAGAGAAGTGAAGCCAAACGGCCCAGTCGCTGGGTaGAGGGTCCGGCGGGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: SGLFHFTAEAGVREVKPNGPVAG*RVRRAV Trigger: GACTGCCCGCCGGACCCTGCACCCAGCGACTGGGCC...GTTTGGCTTCACTTCTCTGACCCCAGCCTCGGCCGTAAAGTGAAAGAGACCGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS-3UTR GCA 90 bp | GGGAAGAGGGCGGCGAGGGGGAGAGGACACGATCCAAGAACCAGAGTCCGAAAGGGCCAGACAGGGCATTaGTCCACGGGTTCGGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: GKRAARGRGHDPRTRVRKGQTGH*STGSGC Trigger: ACAGCCCGAACCCGTGGAGCAATGCCCTGTCTGGCC...CTTTCGGACTCTGGTTCTTGGATCGTGTCCTCTCCCCCTCGCCGCCCTCTTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS-3UTR CCA 90 bp | GACAGGGCATTGCTCCACGGGTTCGGGCTGTACAACCTTCCCCTCCTTGAGGTGCTTGCGGCCGCAGCCTaGGGTCACAAAGGCCCGCAA | + |
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Preference number: 4 (lower is better) Translates to: DRALLHGFGLYNLPLLEVLAAAA*GHKGPQ Trigger: TTGCGGGCCTTTGTGACCCCAGGCTGCGGCCGCAAG...CACCTCAAGGAGGGGAAGGTTGTACAGCCCGAACCCGTGGAGCAATGCCCTGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS-3UTR CCA 90 bp | AAGCTGAAGCTGGTCCGGTCTCTTTCACTTTACGGCCGAGGCTGGGGTCAGAGATCAGGTGGTCGGCCATaGCGGCAGGCCGGCTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: KLKLVRSLSLYGRGWGQRSGGRP*RQAGCL Trigger: CAGGCAGCCGGCCTGCCGCCATGGCCGACCACCTGA...TCTCTGACCCCAGCCTCGGCCGTAAAGTGAAAGAGACCGGACCAGCTTCAGCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS-3UTR CCA 90 bp | GGGAAGAGGGCGGCGAGGGGGAGAGGACACGATCCAAGAACCAGAGTCCGAAAGCAGTCGAACTCGCTCTaGCCCAGGAAGAGCTCGGGC | + |
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Preference number: 4 (lower is better) Translates to: GKRAARGRGHDPRTRVRKQSNSL*PRKSSG Trigger: GCCCGAGCTCTTCCTGGGCCAGAGCGAGTTCGACTG...CTTTCGGACTCTGGTTCTTGGATCGTGTCCTCTCCCCCTCGCCGCCCTCTTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS-3UTR CCA 90 bp | GGGAAGAGGGCGGCGAGGGGGAGAGGACACGATCCAAGAACCAGAGTCCGAAAGAGGAGATGGTGGCTCTaGGGACCCGATCCCGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: GKRAARGRGHDPRTRVRKRRWWL*GPDPEE Trigger: CTCCTCGGGATCGGGTCCCCAGAGCCACCATCTCCT...CTTTCGGACTCTGGTTCTTGGATCGTGTCCTCTCCCCCTCGCCGCCCTCTTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS-3UTR TCA 90 bp | GACAGGGCATTGCTCCACGGGTTCGGGCTGTACAACCTTCCCCTCCTTGAGGTGCAACCTTCCCCTCCTTaGGGTGGGAGGCCCAGCAAC | + |
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Preference number: 4 (lower is better) Translates to: DRALLHGFGLYNLPLLEVQPSPP*GGRPSN Trigger: GTTGCTGGGCCTCCCACCTCAAGGAGGGGAAGGTTG...CACCTCAAGGAGGGGAAGGTTGTACAGCCCGAACCCGTGGAGCAATGCCCTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS-3UTR CCA 90 bp | AAGCTGAAGCTGGTCCGGTCTCTTTCACTTTACGGCCGAGGCTGGGGTCAGAGAGCAGGAGGCAAGGCCTaGAGGGACGCCAGGGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: KLKLVRSLSLYGRGWGQRAGGKA*RDARVP Trigger: TGGGACCCTGGCGTCCCTCCAGGCCTTGCCTCCTGC...TCTCTGACCCCAGCCTCGGCCGTAAAGTGAAAGAGACCGGACCAGCTTCAGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS-3UTR CCA 90 bp | TTCGGGCTGTACAACCTTCCCCTCCTTGAGGTGGGAGGCCCAGCAACCACAGGGTTCCCCTCCTTGAGGTaGGAGGCCCAGCAACCACAG | + |
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Preference number: 4 (lower is better) Translates to: FGLYNLPLLEVGGPATTGFPSLR*EAQQPQ Trigger: CTGTGGTTGCTGGGCCTCCCACCTCAAGGAGGGGAA...CCCTGTGGTTGCTGGGCCTCCCACCTCAAGGAGGGGAAGGTTGTACAGCCCGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS-3UTR TCA 90 bp | GGGAAGAGGGCGGCGAGGGGGAGAGGACACGATCCAAGAACCAGAGTCCGAAAGCTGGGGTCAGAGAAGTaGAGCCAAACTGTCCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: GKRAARGRGHDPRTRVRKLGSEK*SQTVLP Trigger: CGGGAGGACAGTTTGGCTTCACTTCTCTGACCCCAG...CTTTCGGACTCTGGTTCTTGGATCGTGTCCTCTCCCCCTCGCCGCCCTCTTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS-3UTR GCA 90 bp | AGAGGACACGATCCAAGAACCAGAGTCCGAAAGCTGAAGCTGGTCCGGTCTCTTGGCCCAGCCCACTACTaGGCACCTTGCGGCCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RGHDPRTRVRKLKLVRSLGPAHY*APCGRS Trigger: GCTGCGGCCGCAAGGTGCGCAGTAGTGGGCTGGGCC...AAGAGACCGGACCAGCTTCAGCTTTCGGACTCTGGTTCTTGGATCGTGTCCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS-3UTR GCA 90 bp | GGCGGCGAGGGGGAGAGGACACGATCCAAGAACCAGAGTCCGAAAGCTGAAGCTCAGCAGGCAGAGGCCTaGAATGGCTCAGATTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: GGEGERTRSKNQSPKAEAQQAEA*NGSDWG Trigger: CCCCCAATCTGAGCCATTGCAGGCCTCTGCCTGCTG...AGCTTCAGCTTTCGGACTCTGGTTCTTGGATCGTGTCCTCTCCCCCTCGCCGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS-3UTR CCA 90 bp | CTGGTCCGGTCTCTTTCACTTTACGGCCGAGGCTGGGGTCAGAGAAGTGAAGCCGGGAGGCTCAGGAGATaGTGGCTCTGGGGACCCGAT | + |
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Preference number: 4 (lower is better) Translates to: LVRSLSLYGRGWGQRSEAGRLRR*WLWGPD Trigger: ATCGGGTCCCCAGAGCCACCATCTCCTGAGCCTCCC...GGCTTCACTTCTCTGACCCCAGCCTCGGCCGTAAAGTGAAAGAGACCGGACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS-3UTR TCA 90 bp | AAGAACCAGAGTCCGAAAGCTGAAGCTGGTCCGGTCTCTTTCACTTTACGGCCGGCGCCTCCTCGTCGATaGGTTCGGCGTCCATGCCGC | + |
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Preference number: 4 (lower is better) Translates to: KNQSPKAEAGPVSFTLRPAPPRR*VRRPCR Trigger: GCGGCATGGACGCCGAACTCATCGACGAGGAGGCGC...CGGCCGTAAAGTGAAAGAGACCGGACCAGCTTCAGCTTTCGGACTCTGGTTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS-3UTR CCA 90 bp | TCCGGTCTCTTTCACTTTACGGCCGAGGCTGGGGTCAGAGAAGTGAAGCCAAACTGCAATGGCTCAGATTaGGGGAAGAGGGCGGCGAGG | + |
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Preference number: 4 (lower is better) Translates to: SGLFHFTAEAGVREVKPNCNGSD*GKRAAR Trigger: CCTCGCCGCCCTCTTCCCCCAATCTGAGCCATTGCA...GTTTGGCTTCACTTCTCTGACCCCAGCCTCGGCCGTAAAGTGAAAGAGACCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS-3UTR CCA 90 bp | AGAGGACACGATCCAAGAACCAGAGTCCGAAAGCTGAAGCTGGTCCGGTCTCTTCTTTACGGCCGAGGCTaGGGTCAGAGAAGTGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: RGHDPRTRVRKLKLVRSLLYGRG*GQRSEA Trigger: GGCTTCACTTCTCTGACCCCAGCCTCGGCCGTAAAG...AAGAGACCGGACCAGCTTCAGCTTTCGGACTCTGGTTCTTGGATCGTGTCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS-3UTR CCA 90 bp | AGAGGACACGATCCAAGAACCAGAGTCCGAAAGCTGAAGCTGGTCCGGTCTCTTGGCAGAGGCCTGCAATaGCTCAGATTGGGGGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: RGHDPRTRVRKLKLVRSLGRGLQ*LRLGEE Trigger: CTCTTCCCCCAATCTGAGCCATTGCAGGCCTCTGCC...AAGAGACCGGACCAGCTTCAGCTTTCGGACTCTGGTTCTTGGATCGTGTCCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS-3UTR TCA 90 bp | AAGAACCAGAGTCCGAAAGCTGAAGCTGGTCCGGTCTCTTTCACTTTACGGCCGCCAGAGTCCGAAAGCTaGAGCTGGTCCGGTCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: KNQSPKAEAGPVSFTLRPPESES*SWSGLF Trigger: AAAGAGACCGGACCAGCTTCAGCTTTCGGACTCTGG...CGGCCGTAAAGTGAAAGAGACCGGACCAGCTTCAGCTTTCGGACTCTGGTTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS GCA 90 bp | CTCGGCGAGCATCAGGTGGTCGGCCATGGCGGCAGGCCGGCTGCCTaGGGGGACAGCGCGCGGTGGTCAGCGCCGGCTCCCCCGGCCCGG | + |
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Preference number: 5 (lower is better) Translates to: LGEHQVVGHGGRPAA*GDSARWSAPAPPAR Trigger: CCGGGCCGGGGGAGCCGGCGCTGACCACCGCGCGCTGTCCCCGCAGGCAGCCGGCCTGCCGCCATGGCCGACCACCTGATGCTCGCCGAG 80% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS GCA 90 bp | AGCGCCTCCTCGTCGATGAGTTCGGCGTCCATGCCGCCCAGGGCGTaGGCGGGCGGCGGCGGGGCTGCGGCGCTTGGCGCCGGCTGCGGG | + |
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Preference number: 5 (lower is better) Translates to: SASSSMSSASMPPRA*AGGGGAAALGAGCG Trigger: CCCGCAGCCGGCGCCAAGCGCCGCAGCCCCGCCGCCGCCCGCGCACGCCCTGGGCGGCATGGACGCCGAACTCATCGACGAGGAGGCGCT 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS TCA 90 bp | CTGTCCAGGCCCGGGCCCGCGTACGGCGGCAGAGTCCGGAGCGCATaGGGGCCATGGGCGGCCGCGGCGGACGGCGGCCTCTGCACCAGG | + |
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Preference number: 5 (lower is better) Translates to: LSRPGPAYGGRVRSA*GPWAAAADGGLCTR Trigger: CCTGGTGCAGAGGCCGCCGTCCGCCGCGGCCGCCCATGGCCCTCATGCGCTCCGGACTCTGCCGCCGTACGCGGGCCCGGGCCTGGACAG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS GCA 90 bp | AGCCCTCGGCGAGCATCAGGTGGTCGGCCATGGCGGCAGGCCGGCTaGCTGCGGGGACAGCGCGCGGTGGTCAGCGCCGGCTCCCCCGGC | + |
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Preference number: 5 (lower is better) Translates to: SPRRASGGRPWRQAG*LRGQRAVVSAGSPG Trigger: GCCGGGGGAGCCGGCGCTGACCACCGCGCGCTGTCCCCGCAGGCAGCCGGCCTGCCGCCATGGCCGACCACCTGATGCTCGCCGAGGGCT 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS GCA 90 bp | CCGCGCGGCCGGGGTACGGCGTCGCCACAGGCTGCAGGTGCGCGATaGCCGCGGCCGGCGGAGGCACGGCCGGAAAGGGCTGGAAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: PRGRGTASPQAAGAR*PRPAEARPERAGRR Trigger: CCTCCTTCCAGCCCTTTCCGGCCGTGCCTCCGCCGGCCGCGGGCATCGCGCACCTGCAGCCTGTGGCGACGCCGTACCCCGGCCGCGCGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS CCA 90 bp | AGGTGCGCGATGCCCGCGGCCGGCGGAGGCACGGCCGGAAAGGGCTaGAAGGAGGACGGCGGCCCGAAGGCCCCGTACGCCAGGGCCCCG | + |
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Preference number: 5 (lower is better) Translates to: RCAMPAAGGGTAGKG*KEDGGPKAPYARAP Trigger: CGGGGCCCTGGCGTACGGGGCCTTCGGGCCGCCGTCCTCCTTCCAGCCCTTTCCGGCCGTGCCTCCGCCGGCCGCGGGCATCGCGCACCT 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS GCA 90 bp | CGGCCCGGGCCAGCGGCTGCTCTGCGGCGGGAGACCCGGGCACCGTaGGGTCCCTGCAGCTCGGCCGGGCGGAGCAAAACCAAACCCGAC | + |
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Preference number: 5 (lower is better) Translates to: RPGPAAALRRETRAP*GPCSSAGRSKTKPD Trigger: GTCGGGTTTGGTTTTGCTCCGCCCGGCCGAGCTGCAGGGACCGCACGGTGCCCGGGTCTCCCGCCGCAGAGCAGCCGCTGGCCCGGGCCG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS TCA 90 bp | GCAGCCCGAGCTCCAGCTCCAGCGACGTCAGCGCCTCCTCGTCGATaGGTTCGGCGTCCATGCCGCCCAGGGCGTGCGCGGGCGGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: AARAPAPATSAPPRR*VRRPCRPGRARAAA Trigger: CGCCGCCGCCCGCGCACGCCCTGGGCGGCATGGACGCCGAACTCATCGACGAGGAGGCGCTGACGTCGCTGGAGCTGGAGCTCGGGCTGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS GCA 90 bp | CCAGCGGCTGCTCTGCGGCGGGAGACCCGGGCACCGTGCGGTCCCTaGAGCTCGGCCGGGCGGAGCAAAACCAAACCCGACTGGTGCCCC | + |
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Preference number: 5 (lower is better) Translates to: PAAALRRETRAPCGP*SSAGRSKTKPDWCP Trigger: GGGGCACCAGTCGGGTTTGGTTTTGCTCCGCCCGGCCGAGCTGCAGGGACCGCACGGTGCCCGGGTCTCCCGCCGCAGAGCAGCCGCTGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS CCA 90 bp | TCTGCACCAGGCGGTAGCCCTCGGCGAGCATCAGGTGGTCGGCCATaGCGGCAGGCCGGCTGCCTGCGGGGACAGCGCGCGGTGGTCAGC | + |
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Preference number: 5 (lower is better) Translates to: SAPGGSPRRASGGRP*RQAGCLRGQRAVVS Trigger: GCTGACCACCGCGCGCTGTCCCCGCAGGCAGCCGGCCTGCCGCCATGGCCGACCACCTGATGCTCGCCGAGGGCTACCGCCTGGTGCAGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS CCA 90 bp | GCGGGCGGCGCGGACCCCAAGTCCGAGAAGCAGTCGAACTCGCTCTaGCCCAGGAAGAGCTCGGGCAGCTCGCGCACGCGGTGCAGCCCG | + |
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Preference number: 5 (lower is better) Translates to: AGGADPKSEKQSNSL*PRKSSGSSRTRCSP Trigger: CGGGCTGCACCGCGTGCGCGAGCTGCCCGAGCTCTTCCTGGGCCAGAGCGAGTTCGACTGCTTCTCGGACTTGGGGTCCGCGCCGCCCGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS GCA 90 bp | GGTCCCTGCAGCTCGGCCGGGCGGAGCAAAACCAAACCCGACTGGTaGCCCGGCCCAGCCCACTACTGCGCACCTTGCGGCCGCAGCCTG | + |
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Preference number: 5 (lower is better) Translates to: GPCSSAGRSKTKPDW*PGPAHYCAPCGRSL Trigger: CAGGCTGCGGCCGCAAGGTGCGCAGTAGTGGGCTGGGCCGGGGCACCAGTCGGGTTTGGTTTTGCTCCGCCCGGCCGAGCTGCAGGGACC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS GCA 90 bp | AACTCGCTCTGGCCCAGGAAGAGCTCGGGCAGCTCGCGCACGCGGTaGAGCCCGAGCTCCAGCTCCAGCGACGTCAGCGCCTCCTCGTCG | + |
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Preference number: 5 (lower is better) Translates to: NSLWPRKSSGSSRTR*SPSSSSSDVSASSS Trigger: CGACGAGGAGGCGCTGACGTCGCTGGAGCTGGAGCTCGGGCTGCACCGCGTGCGCGAGCTGCCCGAGCTCTTCCTGGGCCAGAGCGAGTT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS CCA 90 bp | GGTGCCCCGGCCCAGCCCACTACTGCGCACCTTGCGGCCGCAGCCTaGGGTCACAAAGGCCCGCAACCTGTAGTGCTCCGAAACCTCCGC | + |
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Preference number: 5 (lower is better) Translates to: GAPAQPTTAHLAAAA*GHKGPQPVVLRNLR Trigger: GCGGAGGTTTCGGAGCACTACAGGTTGCGGGCCTTTGTGACCCCAGGCTGCGGCCGCAAGGTGCGCAGTAGTGGGCTGGGCCGGGGCACC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS GCA 90 bp | ACCAAACCCGACTGGTGCCCCGGCCCAGCCCACTACTGCGCACCTTaGGGCCGCAGCCTGGGGTCACAAAGGCCCGCAACCTGTAGTGCT | + |
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Preference number: 5 (lower is better) Translates to: TKPDWCPGPAHYCAP*GRSLGSQRPATCSA Trigger: AGCACTACAGGTTGCGGGCCTTTGTGACCCCAGGCTGCGGCCGCAAGGTGCGCAGTAGTGGGCTGGGCCGGGGCACCAGTCGGGTTTGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS-3UTR CAA 90 bp | GACAGGGCATTGCTCCACGGGTTCGGGCTGTACAACCTTCCCCTCCTTGAGGTGCCACTACTGCGCACCTaGCGGCCGCAGCCTGGGGTC | + |
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Preference number: 5 (lower is better) Translates to: DRALLHGFGLYNLPLLEVPLLRT*RPQPGV Trigger: GACCCCAGGCTGCGGCCGCAAGGTGCGCAGTAGTGG...CACCTCAAGGAGGGGAAGGTTGTACAGCCCGAACCCGTGGAGCAATGCCCTGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS-3UTR CAA 90 bp | GGGAAGAGGGCGGCGAGGGGGAGAGGACACGATCCAAGAACCAGAGTCCGAAAGCTGCAATGGCTCAGATaGGGGGAAGAGGGCGGCGAG | + |
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Preference number: 5 (lower is better) Translates to: GKRAARGRGHDPRTRVRKLQWLR*GEEGGE Trigger: CTCGCCGCCCTCTTCCCCCAATCTGAGCCATTGCAG...CTTTCGGACTCTGGTTCTTGGATCGTGTCCTCTCCCCCTCGCCGCCCTCTTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS-3UTR CAA 90 bp | AAAGCTGAAGCTGGTCCGGTCTCTTTCACTTTACGGCCGAGGCTGGGGTCAGAGAGGCCAGACAGGGCATaGCTCCACGGGTTCGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: KAEAGPVSFTLRPRLGSERPDRA*LHGFGL Trigger: CAGCCCGAACCCGTGGAGCAATGCCCTGTCTGGCCT...CTCTGACCCCAGCCTCGGCCGTAAAGTGAAAGAGACCGGACCAGCTTCAGCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS GCA 72 bp | TCGTCGATGAGTTCGGCGTCCATGCCGCCCAGGGCGTaGGCGGGCGGCGGCGGGGCTGCGGCGCTTGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: SSMSSASMPPRA*AGGGGAAALGA Trigger: GGCGCCAAGCGCCGCAGCCCCGCCGCCGCCCGCGCACGCCCTGGGCGGCATGGACGCCGAACTCATCGACGA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS GCA 72 bp | CGAGCATCAGGTGGTCGGCCATGGCGGCAGGCCGGCTaGCTGCGGGGACAGCGCGCGGTGGTCAGCGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: RASGGRPWRQAG*LRGQRAVVSAG Trigger: GCCGGCGCTGACCACCGCGCGCTGTCCCCGCAGGCAGCCGGCCTGCCGCCATGGCCGACCACCTGATGCTCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS GCA 72 bp | CGGGGTACGGCGTCGCCACAGGCTGCAGGTGCGCGATaGCCGCGGCCGGCGGAGGCACGGCCGGAAAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: RGTASPQAAGAR*PRPAEARPERA Trigger: AGCCCTTTCCGGCCGTGCCTCCGCCGGCCGCGGGCATCGCGCACCTGCAGCCTGTGGCGACGCCGTACCCCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS GCA 72 bp | TGGCCCAGGAAGAGCTCGGGCAGCTCGCGCACGCGGTaGAGCCCGAGCTCCAGCTCCAGCGACGTCAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: WPRKSSGSSRTR*SPSSSSSDVSA Trigger: GGCGCTGACGTCGCTGGAGCTGGAGCTCGGGCTGCACCGCGTGCGCGAGCTGCCCGAGCTCTTCCTGGGCCA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS TCA 72 bp | GCTCCAGCTCCAGCGACGTCAGCGCCTCCTCGTCGATaGGTTCGGCGTCCATGCCGCCCAGGGCGTGCGCGG | + |
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Preference number: 6 (lower is better) Translates to: APAPATSAPPRR*VRRPCRPGRAR Trigger: CCGCGCACGCCCTGGGCGGCATGGACGCCGAACTCATCGACGAGGAGGCGCTGACGTCGCTGGAGCTGGAGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS GCA 72 bp | AGCTCGGCCGGGCGGAGCAAAACCAAACCCGACTGGTaGCCCGGCCCAGCCCACTACTGCGCACCTTGCGGC | + |
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Preference number: 6 (lower is better) Translates to: SSAGRSKTKPDW*PGPAHYCAPCG Trigger: GCCGCAAGGTGCGCAGTAGTGGGCTGGGCCGGGGCACCAGTCGGGTTTGGTTTTGCTCCGCCCGGCCGAGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS CCA 72 bp | GCGGACCCCAAGTCCGAGAAGCAGTCGAACTCGCTCTaGCCCAGGAAGAGCTCGGGCAGCTCGCGCACGCGG | + |
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Preference number: 6 (lower is better) Translates to: ADPKSEKQSNSL*PRKSSGSSRTR Trigger: CCGCGTGCGCGAGCTGCCCGAGCTCTTCCTGGGCCAGAGCGAGTTCGACTGCTTCTCGGACTTGGGGTCCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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| CDS CCA 72 bp | GCCCAGCCCACTACTGCGCACCTTGCGGCCGCAGCCTaGGGTCACAAAGGCCCGCAACCTGTAGTGCTCCGA | + |
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Preference number: 6 (lower is better) Translates to: AQPTTAHLAAAA*GHKGPQPVVLR Trigger: TCGGAGCACTACAGGTTGCGGGCCTTTGTGACCCCAGGCTGCGGCCGCAAGGTGCGCAGTAGTGGGCTGGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372638.4 |
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