RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CITED2 (Homo sapiens)

Ensembl gene IDs: ENSG00000164442

Ensembl transcript IDs: ENST00000367651.4, ENST00000536159.2, ENST00000537332.2, ENST00000618718.1

Found 285 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATaGAACCAACTAATGCAATTTTTCCTTTCACTCGTAAATCTGAAT +
Preference number: 1 (lower is better)
Translates to: SEMAVCAVISALRSS*NQLMQFFLSLVNLN
Trigger: ATTCAGATTTACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
3UTR TCA 90 bp ATTATGCCAATTATGTTAAATCCTGCTCTCCGCTTAAGCTCATCATaGCCTGTTTTAGTGTCCTGTAATTTATCCTTTGGAATGCTTACT +
Preference number: 1 (lower is better)
Translates to: IMPIMLNPALRLSSS*PVLVSCNLSFGMLT
Trigger: AGTAAGCATTCCAAAGGATAAATTACAGGACACTAAAACAGGTCATGATGAGCTTAAGCGGAGAGCAGGATTTAACATAATTGGCATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367651.4
3UTR-3UTR TCA 90 bp TCTGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTACATAAGGGAGGTGGGTaGATGTCAAGGCTACAAAAA +
Preference number: 2 (lower is better)
Translates to: SALRSSCNQLMQFFLSLVHKGGG*MSRLQK
Trigger: TTTTTGTAGCCTTGACATTCACCCACCTCCCTTATG...TACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
3UTR-3UTR CCA 90 bp TGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAAATCACGCCGAAGAAGTTaGGGGTTTGATTTCTTTCGC +
Preference number: 2 (lower is better)
Translates to: CPSKFMQPTNAIFPFTRKSRRRS*GFDFFR
Trigger: GCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGA...TTTACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
3UTR-3UTR TCA 90 bp ACAATGATAACAATGAAGCATTATGCCAATTATGTTAAATCCTGCTCTCCGCTTAAGAAGTTGGGGGTTTaGTTTCTTTCGCCGGGGTTT +
Preference number: 2 (lower is better)
Translates to: TMITMKHYANYVKSCSPLKKLGV*FLSPGF
Trigger: AAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTT...AAGCGGAGAGCAGGATTTAACATAATTGGCATAATGCTTCATTGTTATCATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367651.4
3UTR-3UTR TCA 90 bp AAAGCCACCAAAGGGAACAACCACCCCCAAATGACTTCTAGAAAACAAGTTATTTCAAGATCTGAAAAGTaGGATACTGTGTCTAAGGGA +
Preference number: 2 (lower is better)
Translates to: KATKGNNHPQMTSRKQVISRSEK*DTVSKG
Trigger: TCCCTTAGACACAGTATCTCACTTTTCAGATCTTGA...AATAACTTGTTTTCTAGAAGTCATTTGGGGGTGGTTGTTCCCTTTGGTGGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367651.4
3UTR-3UTR TCA 90 bp AAAGCCACCAAAGGGAACAACCACCCCCAAATGACTTCTAGAAAACAAGTTATTTTAATATCTAACAGTTaGGCACTGGAGAAAGTGAGG +
Preference number: 2 (lower is better)
Translates to: KATKGNNHPQMTSRKQVILISNS*ALEKVR
Trigger: CCTCACTTTCTCCAGTGCTCAACTGTTAGATATTAA...AATAACTTGTTTTCTAGAAGTCATTTGGGGGTGGTTGTTCCCTTTGGTGGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367651.4
3UTR-3UTR GCA 90 bp AAAGCCACCAAAGGGAACAACCACCCCCAAATGACTTCTAGAAAACAAGTTATTTTGTGCAGTAATATCTaGCCTTCGAAGTTCATGCAA +
Preference number: 2 (lower is better)
Translates to: KATKGNNHPQMTSRKQVILCSNI*PSKFMQ
Trigger: TTGCATGAACTTCGAAGGGCAGATATTACTGCACAA...AATAACTTGTTTTCTAGAAGTCATTTGGGGGTGGTTGTTCCCTTTGGTGGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367651.4
3UTR-3UTR TCA 90 bp TCTGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAAAACCTTTCAAGATCTaGAAAGTGAGATACTGTGTC +
Preference number: 2 (lower is better)
Translates to: SALRSSCNQLMQFFLSLVKPFKI*KVRYCV
Trigger: GACACAGTATCTCACTTTTCAGATCTTGAAAGGTTT...TACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
3UTR-3UTR TCA 90 bp ATGCAGTTCAGTCATTTGAAACCATCTACAAAATCCACAAGATTAAGCAGTTTGAAACCTTTCAAGATCTaGAAAGTGAGATACTGTGTC +
Preference number: 2 (lower is better)
Translates to: MQFSHLKPSTKSTRLSSLKPFKI*KVRYCV
Trigger: GACACAGTATCTCACTTTTCAGATCTTGAAAGGTTT...CAAACTGCTTAATCTTGTGGATTTTGTAGATGGTTTCAAATGACTGAACTGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
3UTR-3UTR CAA 90 bp AGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAAGAAGAAGTTGGGGGTTaGATTTCTTTCGCCGGGGTT +
Preference number: 3 (lower is better)
Translates to: SEMAVCAVISALRSSCNQEEVGG*ISFAGV
Trigger: AACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTC...TTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
3UTR-3UTR CAA 90 bp GATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAACTAATGAAGAAGTTGGGGGTTaGATTTCTTTCGCCGGGGTT +
Preference number: 3 (lower is better)
Translates to: DGSLCSNICPSKFMQPTNEEVGG*ISFAGV
Trigger: AACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTC...ATTAGTTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
3UTR-3UTR CAA 90 bp GATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAACTAATATGCAGTTCAGTCATTaGAAACCATCTACAAAATCC +
Preference number: 3 (lower is better)
Translates to: DGSLCSNICPSKFMQPTNMQFSH*KPSTKS
Trigger: GGATTTTGTAGATGGTTTCAAATGACTGAACTGCAT...ATTAGTTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
3UTR-3UTR CAA 90 bp TATGCCAATTATGTTAAATCCTGCTCTCCGCTTAAGCTCATCATGACCTGTTTTAAATCTGTGAAATGTTaGCCACTGACGACATTCCAC +
Preference number: 3 (lower is better)
Translates to: YANYVKSCSPLKLIMTCFKSVKC*PLTTFH
Trigger: GTGGAATGTCGTCAGTGGCAAACATTTCACAGATTT...AAAACAGGTCATGATGAGCTTAAGCGGAGAGCAGGATTTAACATAATTGGCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367651.4
3UTR GCA 72 bp GCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATaGAACCAACTAATGCAATTTTTCCTTTCACTCGTA +
Preference number: 3 (lower is better)
Translates to: AVCAVISALRSS*NQLMQFFLSLV
Trigger: TACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
3UTR GCA 72 bp AAAATGAAGCGAGATGGCAGTTTGTGCAGTAATATCTaGCCTTCGAAGTTCATGCAACCAACTAATGCAATT +
Preference number: 3 (lower is better)
Translates to: KMKRDGSLCSNI*PSKFMQPTNAI
Trigger: AATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCTTCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
3UTR-3UTR CAA 90 bp CTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAAATCTGATGCAGTTCAGTCATTaGAAACCATCTACAAAATCC +
Preference number: 3 (lower is better)
Translates to: LRSSCNQLMQFFLSLVNLMQFSH*KPSTKS
Trigger: GGATTTTGTAGATGGTTTCAAATGACTGAACTGCAT...CAGATTTACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
3UTR GCA 72 bp ATAACAATGAAGCATTATGCCAATTATGTTAAATCCTaGTCTCCGCTTAAGCTCATCATGACCTGTTTTAGT +
Preference number: 3 (lower is better)
Translates to: ITMKHYANYVKS*SPLKLIMTCFS
Trigger: ACTAAAACAGGTCATGATGAGCTTAAGCGGAGAGCAGGATTTAACATAATTGGCATAATGCTTCATTGTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367651.4
CDS-3UTR GCA 90 bp ATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGAGCGGGCATGTTGCCGCTaGCGCTGCCGCCGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: IHAEEVGGLISFAGVSIERACCR*RCRRRC
Trigger: ACAGCGGCGGCGGCAGCGGCAGCGGCAACATGCCCG...CTCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp AATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGACGCCGGGGGTGCTGCTaGCGCCGCTGTGCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: NSRRRSWGFDFFRRGFDRRRGCC*RRCAWG
Trigger: ACCCCAAGCACAGCGGCGGCAGCAGCACCCCCGGCG...TCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp ATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGAGCCCGGCCCCATCGCATaGCTGATGCCGCTCGTGGCA +
Preference number: 4 (lower is better)
Translates to: IHAEEVGGLISFAGVSIEPGPIA*LMPLVA
Trigger: TGCCACGAGCGGCATCAGGCATGCGATGGGGCCGGG...CTCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR GCA 90 bp TTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCCGGGCATGTTGCCGCTaGCGCTGCCGCCGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: LIHAEEVGGLISFAGVSIRACCR*RCRRRC
Trigger: ACAGCGGCGGCGGCAGCGGCAGCGGCAACATGCCCG...GATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CCA 90 bp ATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGAGATTGCAGCGGGGACGTaGGCCACGGAGGCGGGCATG +
Preference number: 4 (lower is better)
Translates to: IHAEEVGGLISFAGVSIEIAAGT*ATEAGM
Trigger: CATGCCCGCCTCCGTGGCCCACGTCCCCGCTGCAAT...CTCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp AATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGAGGTGCAGCCCATTGGTaGCGTCGGGGAAGCGCCCGT +
Preference number: 4 (lower is better)
Translates to: NSRRRSWGFDFFRRGFDRGAAHW*RRGSAR
Trigger: ACGGGCGCTTCCCCGACGGCACCAATGGGCTGCACC...TCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR GCA 90 bp AATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGATGGGGGCTCGGGAACTaGCCCATGCCCATGCGGTGG +
Preference number: 4 (lower is better)
Translates to: NSRRRSWGFDFFRRGFDRWGLGN*PMPMRW
Trigger: CCACCGCATGGGCATGGGGCAGTTCCCGAGCCCCCA...TCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR GCA 90 bp AATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGACCCGGCCCCATCGCATaGCTGATGCCGCTCGTGGCA +
Preference number: 4 (lower is better)
Translates to: NSRRRSWGFDFFRRGFDRPGPIA*LMPLVA
Trigger: TGCCACGAGCGGCATCAGGCATGCGATGGGGCCGGG...TCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR GCA 90 bp AGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAACGCCGGGGGTGCTGCTaGCGCCGCTGTGCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: SEMAVCAVISALRSSCNQRRGCC*RRCAWG
Trigger: ACCCCAAGCACAGCGGCGGCAGCAGCACCCCCGGCG...TTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp TTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATAGCCGCCGGGGGTGCTaGTGCCGCCGCTGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: FNSRRRSWGFDFFRRGFDSRRGC*CRRCAW
Trigger: CCAAGCACAGCGGCGGCAGCAGCACCCCCGGCGGCT...ATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp ATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGAGATTGGGCGGCAGCATTaGAGCGGGGACGTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: IHAEEVGGLISFAGVSIEIGRQH*SGDVGH
Trigger: GTGGCCCACGTCCCCGCTGCAATGCTGCCGCCCAAT...CTCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp ATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGAGGGGACCTTCCTGGCGTaGAAAGCGCTTCGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: IHAEEVGGLISFAGVSIEGTFLA*KALRCR
Trigger: GCGACAGCGAAGCGCTTTGCACGCCAGGAAGGTCCC...CTCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367651.4
ENST00000618718.1
CDS-3UTR GCA 90 bp TTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCCCCGGCCCCATCGCATaGCTGATGCCGCTCGTGGCA +
Preference number: 4 (lower is better)
Translates to: LIHAEEVGGLISFAGVSIPGPIA*LMPLVA
Trigger: TGCCACGAGCGGCATCAGGCATGCGATGGGGCCGGG...GATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR CCA 90 bp AATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGAGATGGTGCAGCCCATTaGTGCCGTCGGGGAAGCGCC +
Preference number: 4 (lower is better)
Translates to: NSRRRSWGFDFFRRGFDRDGAAH*CRRGSA
Trigger: GGCGCTTCCCCGACGGCACCAATGGGCTGCACCATC...TCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR TCA 90 bp AATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGAGCCCCATCGCATGCCTaGTGCCGCTCGTGGCATTCA +
Preference number: 4 (lower is better)
Translates to: NSRRRSWGFDFFRRGFDRAPSHA*CRSWHS
Trigger: TGAATGCCACGAGCGGCATCAGGCATGCGATGGGGC...TCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR GCA 90 bp TTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATGGTGCAGCCCATTGGTaGCGTCGGGGAAGCGCCCGT +
Preference number: 4 (lower is better)
Translates to: FNSRRRSWGFDFFRRGFDGAAHW*RRGSAR
Trigger: ACGGGCGCTTCCCCGACGGCACCAATGGGCTGCACC...ATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR GCA 90 bp AGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAAGGTGCAGCCCATTGGTaGCGTCGGGGAAGCGCCCGT +
Preference number: 4 (lower is better)
Translates to: SEMAVCAVISALRSSCNQGAAHW*RRGSAR
Trigger: ACGGGCGCTTCCCCGACGGCACCAATGGGCTGCACC...TTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp AATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGAACTGCCCCATGCCCATaGGGTGGGCAGGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: NSRRRSWGFDFFRRGFDRTAPCP*GGQGDG
Trigger: ACCATCACCCTGCCCACCGCATGGGCATGGGGCAGT...TCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR GCA 90 bp TTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATTGGGGGCTCGGGAACTaGCCCATGCCCATGCGGTGG +
Preference number: 4 (lower is better)
Translates to: FNSRRRSWGFDFFRRGFDWGLGN*PMPMRW
Trigger: CCACCGCATGGGCATGGGGCAGTTCCCGAGCCCCCA...ATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR GCA 90 bp AGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAATGGGGGCTCGGGAACTaGCCCATGCCCATGCGGTGG +
Preference number: 4 (lower is better)
Translates to: SEMAVCAVISALRSSCNQWGLGN*PMPMRW
Trigger: CCACCGCATGGGCATGGGGCAGTTCCCGAGCCCCCA...TTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp TTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGCTTCTGCAGCTGCATaGTGGCCGGCAGGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: LIHAEEVGGLISFAGVSIASAAA*WPAGSL
Trigger: GAGGCTCCCTGCCGGCCAGCATGCAGCTGCAGAAGC...GATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR GCA 90 bp ATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGAGTTGAGCTTCTGCAGCTaGATGCTGGCCGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: IHAEEVGGLISFAGVSIELSFCS*MLAGRE
Trigger: CTCCCTGCCGGCCAGCATGCAGCTGCAGAAGCTCAA...CTCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR GCA 90 bp GATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAACTAATAGCCGCCGGGGGTGCTaGTGCCGCCGCTGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: DGSLCSNICPSKFMQPTNSRRGC*CRRCAW
Trigger: CCAAGCACAGCGGCGGCAGCAGCACCCCCGGCGGCT...ATTAGTTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp ATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGAGAACACAGCCGGACGCTaGACAAACAGCCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: IHAEEVGGLISFAGVSIENTAGR*TNSPFP
Trigger: GGGGAAGGGGCTGTTTGTGCAGCGTCCGGCTGTGTT...CTCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537332.2
CDS-3UTR CCA 90 bp TTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCTCTCGCAGCGGCCGCTaGGGCAGATTCGGAGCCGTT +
Preference number: 4 (lower is better)
Translates to: LIHAEEVGGLISFAGVSISRSGR*GRFGAV
Trigger: AACGGCTCCGAATCTGCCCCAGCGGCCGCTGCGAGA...GATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367651.4
ENST00000618718.1
CDS-3UTR CCA 90 bp TTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGATGGTGCAGCCCATTaGTGCCGTCGGGGAAGCGCC +
Preference number: 4 (lower is better)
Translates to: LIHAEEVGGLISFAGVSIDGAAH*CRRGSA
Trigger: GGCGCTTCCCCGACGGCACCAATGGGCTGCACCATC...GATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR CCA 90 bp TTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGCGTTGAAGGCGTGCTaGGGCTGCTGCTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LIHAEEVGGLISFAGVSIALKAC*GCCCWW
Trigger: CCACCAGCAGCAGCAGCCCCAGCACGCCTTCAACGC...GATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR CCA 90 bp TTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCTCTGCAGCTGCATGCTaGCCGGCAGGGAGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: LIHAEEVGGLISFAGVSISAAAC*PAGSLP
Trigger: AGGGAGGCTCCCTGCCGGCCAGCATGCAGCTGCAGA...GATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR TCA 90 bp TTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGCCCCATCGCATGCCTaGTGCCGCTCGTGGCATTCA +
Preference number: 4 (lower is better)
Translates to: LIHAEEVGGLISFAGVSIAPSHA*CRSWHS
Trigger: TGAATGCCACGAGCGGCATCAGGCATGCGATGGGGC...GATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR GCA 90 bp TTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATTCGGGAACTGCCCCATaGCCATGCGGTGGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: FNSRRRSWGFDFFRRGFDSGTAP*PCGGQG
Trigger: ACCCTGCCCACCGCATGGGCATGGGGCAGTTCCCGA...ATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR GCA 90 bp AGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAAGCTTCTGCAGCTGCATaGTGGCCGGCAGGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: SEMAVCAVISALRSSCNQASAAA*WPAGSL
Trigger: GAGGCTCCCTGCCGGCCAGCATGCAGCTGCAGAAGC...TTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp TCTGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTACGCCGGGGGTGCTGCTaGCGCCGCTGTGCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: SALRSSCNQLMQFFLSLVRRGCC*RRCAWG
Trigger: ACCCCAAGCACAGCGGCGGCAGCAGCACCCCCGGCG...TACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CCA 90 bp TTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATGATGGTGCAGCCCATTaGTGCCGTCGGGGAAGCGCC +
Preference number: 4 (lower is better)
Translates to: FNSRRRSWGFDFFRRGFDDGAAH*CRRGSA
Trigger: GGCGCTTCCCCGACGGCACCAATGGGCTGCACCATC...ATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR CCA 90 bp TTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATTCTGCAGCTGCATGCTaGCCGGCAGGGAGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: FNSRRRSWGFDFFRRGFDSAAAC*PAGSLP
Trigger: AGGGAGGCTCCCTGCCGGCCAGCATGCAGCTGCAGA...ATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR CCA 90 bp AGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAATCTGCAGCTGCATGCTaGCCGGCAGGGAGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: SEMAVCAVISALRSSCNQSAAAC*PAGSLP
Trigger: AGGGAGGCTCCCTGCCGGCCAGCATGCAGCTGCAGA...TTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CCA 90 bp ATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGAGTTTGTCCCGTTCATCTaGTGGCCTGCAGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: IHAEEVGGLISFAGVSIEFVPFI*WPAAGC
Trigger: GCACCCTGCTGCAGGCCACCAGATGAACGGGACAAA...CTCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR TCA 90 bp AGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAAGCCCCATCGCATGCCTaGTGCCGCTCGTGGCATTCA +
Preference number: 4 (lower is better)
Translates to: SEMAVCAVISALRSSCNQAPSHA*CRSWHS
Trigger: TGAATGCCACGAGCGGCATCAGGCATGCGATGGGGC...TTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp ATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGAGTTATTTCCCCTCCGTTaGCCTCACAGCTCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: IHAEEVGGLISFAGVSIELFPLR*PHSSAG
Trigger: TCCTGCCGAGCTGTGAGGGCAACGGAGGGGAAATAA...CTCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367651.4
CDS-3UTR GCA 90 bp ATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGAGCGTTTTTGCGATTTCTaGTCCGAAGACCGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: IHAEEVGGLISFAGVSIERFCDF*SEDRGR
Trigger: CCGCCCTCGGTCTTCGGAGCAGAAATCGCAAAAACG...CTCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000367651.4
ENST00000618718.1
CDS-3UTR GCA 90 bp TTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATACTGCCCCATGCCCATaGGGTGGGCAGGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: FNSRRRSWGFDFFRRGFDTAPCP*GGQGDG
Trigger: ACCATCACCCTGCCCACCGCATGGGCATGGGGCAGT...ATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR GCA 90 bp ATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGAGCTCACTCTGCTGGGCTaGTGTTTGCACACGAAGTCC +
Preference number: 4 (lower is better)
Translates to: IHAEEVGGLISFAGVSIELTLLG*CLHTKS
Trigger: GGACTTCGTGTGCAAACAGCAGCCCAGCAGAGTGAG...CTCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR CCA 90 bp AATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGAGTCCCGTTCATCTGGTaGCCTGCAGCAGGGTGCAAA +
Preference number: 4 (lower is better)
Translates to: NSRRRSWGFDFFRRGFDRVPFIW*PAAGCK
Trigger: TTTGCACCCTGCTGCAGGCCACCAGATGAACGGGAC...TCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR CCA 90 bp GATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAACTAATATTGCAGCGGGGACGTaGGCCACGGAGGCGGGCATG +
Preference number: 4 (lower is better)
Translates to: DGSLCSNICPSKFMQPTNIAAGT*ATEAGM
Trigger: CATGCCCGCCTCCGTGGCCCACGTCCCCGCTGCAAT...ATTAGTTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp GATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAACTAATTCGGGAACTGCCCCATaGCCATGCGGTGGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: DGSLCSNICPSKFMQPTNSGTAP*PCGGQG
Trigger: ACCCTGCCCACCGCATGGGCATGGGGCAGTTCCCGA...ATTAGTTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp TCTGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTACCCGGCCCCATCGCATaGCTGATGCCGCTCGTGGCA +
Preference number: 4 (lower is better)
Translates to: SALRSSCNQLMQFFLSLVPGPIA*LMPLVA
Trigger: TGCCACGAGCGGCATCAGGCATGCGATGGGGCCGGG...TACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp TTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATTTGAGCTTCTGCAGCTaGATGCTGGCCGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: FNSRRRSWGFDFFRRGFDLSFCS*MLAGRE
Trigger: CTCCCTGCCGGCCAGCATGCAGCTGCAGAAGCTCAA...ATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR GCA 90 bp AGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAATTGAGCTTCTGCAGCTaGATGCTGGCCGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SEMAVCAVISALRSSCNQLSFCS*MLAGRE
Trigger: CTCCCTGCCGGCCAGCATGCAGCTGCAGAAGCTCAA...TTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CCA 90 bp TTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCTCGGGGAAGCGCCCGTaGTTCATGGCCATCATATGG +
Preference number: 4 (lower is better)
Translates to: LIHAEEVGGLISFAGVSISGKRP*FMAIIW
Trigger: CCATATGATGGCCATGAACCACGGGCGCTTCCCCGA...GATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR CCA 90 bp TTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGTCCCGTTCATCTGGTaGCCTGCAGCAGGGTGCAAA +
Preference number: 4 (lower is better)
Translates to: LIHAEEVGGLISFAGVSIVPFIW*PAAGCK
Trigger: TTTGCACCCTGCTGCAGGCCACCAGATGAACGGGAC...GATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR TCA 90 bp GATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAACTAATGCCCCATCGCATGCCTaGTGCCGCTCGTGGCATTCA +
Preference number: 4 (lower is better)
Translates to: DGSLCSNICPSKFMQPTNAPSHA*CRSWHS
Trigger: TGAATGCCACGAGCGGCATCAGGCATGCGATGGGGC...ATTAGTTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp TGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTGGTGCAGCCCATTGGTaGCGTCGGGGAAGCGCCCGT +
Preference number: 4 (lower is better)
Translates to: CSNICPSKFMQPTNAIFPGAAHW*RRGSAR
Trigger: ACGGGCGCTTCCCCGACGGCACCAATGGGCTGCACC...AGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp AAAGCCACCAAAGGGAACAACCACCCCCAAATGACTTCTAGAAAACAAGTTATTTCGGGAACTGCCCCATaGCCATGCGGTGGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: KATKGNNHPQMTSRKQVISGTAP*PCGGQG
Trigger: ACCCTGCCCACCGCATGGGCATGGGGCAGTTCCCGA...AATAACTTGTTTTCTAGAAGTCATTTGGGGGTGGTTGTTCCCTTTGGTGGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367651.4
CDS-3UTR GCA 90 bp TCTGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAGCTTCTGCAGCTGCATaGTGGCCGGCAGGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: SALRSSCNQLMQFFLSLVASAAA*WPAGSL
Trigger: GAGGCTCCCTGCCGGCCAGCATGCAGCTGCAGAAGC...TACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp TTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATTGGTTGTTGAGCTTCTaGAGCTGCATGCTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: FNSRRRSWGFDFFRRGFDWLLSF*SCMLAG
Trigger: GCCGGCCAGCATGCAGCTGCAGAAGCTCAACAACCA...ATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR GCA 90 bp TTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATGTTCATCTGGTGGCCTaGAGCAGGGTGCAAATCCGG +
Preference number: 4 (lower is better)
Translates to: FNSRRRSWGFDFFRRGFDVHLVA*SRVQIR
Trigger: CCGGATTTGCACCCTGCTGCAGGCCACCAGATGAAC...ATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR GCA 90 bp TTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCCGCTGTGCTTGGGGTTaGAATCTCGGAAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: LIHAEEVGGLISFAGVSIRCAWG*NLGSAG
Trigger: ACCAGCACTTCCGAGATTGCAACCCCAAGCACAGCG...GATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp ATGCAGTTCAGTCATTTGAAACCATCTACAAAATCCACAAGATTAAGCAGTTTGAGCCGCCGGGGGTGCTaGTGCCGCCGCTGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: MQFSHLKPSTKSTRLSSLSRRGC*CRRCAW
Trigger: CCAAGCACAGCGGCGGCAGCAGCACCCCCGGCGGCT...CAAACTGCTTAATCTTGTGGATTTTGTAGATGGTTTCAAATGACTGAACTGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp ATGCAGTTCAGTCATTTGAAACCATCTACAAAATCCACAAGATTAAGCAGTTTGCGGGCATGTTGCCGCTaGCGCTGCCGCCGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: MQFSHLKPSTKSTRLSSLRACCR*RCRRRC
Trigger: ACAGCGGCGGCGGCAGCGGCAGCGGCAACATGCCCG...CAAACTGCTTAATCTTGTGGATTTTGTAGATGGTTTCAAATGACTGAACTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CCA 90 bp TCTGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAGATGGTGCAGCCCATTaGTGCCGTCGGGGAAGCGCC +
Preference number: 4 (lower is better)
Translates to: SALRSSCNQLMQFFLSLVDGAAH*CRRGSA
Trigger: GGCGCTTCCCCGACGGCACCAATGGGCTGCACCATC...TACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CCA 90 bp TCTGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAGCGTTGAAGGCGTGCTaGGGCTGCTGCTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SALRSSCNQLMQFFLSLVALKAC*GCCCWW
Trigger: CCACCAGCAGCAGCAGCCCCAGCACGCCTTCAACGC...TACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CCA 90 bp TCTGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTATCTGCAGCTGCATGCTaGCCGGCAGGGAGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: SALRSSCNQLMQFFLSLVSAAAC*PAGSLP
Trigger: AGGGAGGCTCCCTGCCGGCCAGCATGCAGCTGCAGA...TACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CCA 90 bp AGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAAGTCCCGTTCATCTGGTaGCCTGCAGCAGGGTGCAAA +
Preference number: 4 (lower is better)
Translates to: SEMAVCAVISALRSSCNQVPFIW*PAAGCK
Trigger: TTTGCACCCTGCTGCAGGCCACCAGATGAACGGGAC...TTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CCA 90 bp AGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAATTTGTCCCGTTCATCTaGTGGCCTGCAGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: SEMAVCAVISALRSSCNQFVPFI*WPAAGC
Trigger: GCACCCTGCTGCAGGCCACCAGATGAACGGGACAAA...TTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp ATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGAGCAGTCCTTCCGTTTTTaGGATTTCTGCTCCGAAGAC +
Preference number: 4 (lower is better)
Translates to: IHAEEVGGLISFAGVSIEQSFRF*DFCSED
Trigger: GTCTTCGGAGCAGAAATCGCAAAAACGGAAGGACTG...CTCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000367651.4
ENST00000618718.1
CDS-3UTR GCA 90 bp TCTGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAACTGCCCCATGCCCATaGGGTGGGCAGGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: SALRSSCNQLMQFFLSLVTAPCP*GGQGDG
Trigger: ACCATCACCCTGCCCACCGCATGGGCATGGGGCAGT...TACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp TCTAAGGGAATGTTTCTTTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTCGGGAACTGCCCCATaGCCATGCGGTGGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: SKGMFLLIHAEEVGGLISSGTAP*PCGGQG
Trigger: ACCCTGCCCACCGCATGGGCATGGGGCAGTTCCCGA...AGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAAAGAAACATTCCCTTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp TGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAAAGCTTCTGCAGCTGCATaGTGGCCGGCAGGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: CPSKFMQPTNAIFPFTRKASAAA*WPAGSL
Trigger: GAGGCTCCCTGCCGGCCAGCATGCAGCTGCAGAAGC...TTTACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp GATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAACTAATTTGAGCTTCTGCAGCTaGATGCTGGCCGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: DGSLCSNICPSKFMQPTNLSFCS*MLAGRE
Trigger: CTCCCTGCCGGCCAGCATGCAGCTGCAGAAGCTCAA...ATTAGTTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp ATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGAGTTGCAATCTCGGAAGTaGTGGTTTGTCCCGTTCATC +
Preference number: 4 (lower is better)
Translates to: IHAEEVGGLISFAGVSIELQSRK*WFVPFI
Trigger: GATGAACGGGACAAACCAGCACTTCCGAGATTGCAA...CTCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR GCA 90 bp TCTAAGGGAATGTTTCTTTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTATTGGGCGGCAGCATTaGAGCGGGGACGTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: SKGMFLLIHAEEVGGLISIGRQH*SGDVGH
Trigger: GTGGCCCACGTCCCCGCTGCAATGCTGCCGCCCAAT...AGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAAAGAAACATTCCCTTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CCA 90 bp TGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTCTCGCAGCGGCCGCTaGGGCAGATTCGGAGCCGTT +
Preference number: 4 (lower is better)
Translates to: CSNICPSKFMQPTNAIFPSRSGR*GRFGAV
Trigger: AACGGCTCCGAATCTGCCCCAGCGGCCGCTGCGAGA...AGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367651.4
CDS-3UTR CCA 90 bp AATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGACAATCTCGGAAGTGCTaGTTTGTCCCGTTCATCTGG +
Preference number: 4 (lower is better)
Translates to: NSRRRSWGFDFFRRGFDRQSRKC*FVPFIW
Trigger: CCAGATGAACGGGACAAACCAGCACTTCCGAGATTG...TCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR CCA 90 bp TTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCAACAGCTCACTCTGCTaGGCTGCTGTTTGCACACGA +
Preference number: 4 (lower is better)
Translates to: LIHAEEVGGLISFAGVSINSSLC*AAVCTR
Trigger: TCGTGTGCAAACAGCAGCCCAGCAGAGTGAGCTGTT...GATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR TCA 90 bp AATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGAAAGAAGTTGGGGGTTTaGTTTCTTTCGCCGGGGTTT +
Preference number: 4 (lower is better)
Translates to: NSRRRSWGFDFFRRGFDRKKLGV*FLSPGF
Trigger: AAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTT...TCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR GCA 90 bp TTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATTCGTGGCATTCATGTTaGCCGCGCCGTAGTGTATGT +
Preference number: 4 (lower is better)
Translates to: FNSRRRSWGFDFFRRGFDSWHSC*PRRSVC
Trigger: ACATACACTACGGCGCGGGCAACATGAATGCCACGA...ATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR GCA 90 bp AATGTTTCTTTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGTGGTTGTTGAGCTTCTaGAGCTGCATGCTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: NVSFNSRRRSWGFDFFRRWLLSF*SCMLAG
Trigger: GCCGGCCAGCATGCAGCTGCAGAAGCTCAACAACCA...CCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAAAGAAACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp CTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAAATCTGATTGGGCGGCAGCATTaGAGCGGGGACGTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: LRSSCNQLMQFFLSLVNLIGRQH*SGDVGH
Trigger: GTGGCCCACGTCCCCGCTGCAATGCTGCCGCCCAAT...CAGATTTACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp TTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATGTCAACAGCTCACTCTaGTGGGCTGCTGTTTGCACA +
Preference number: 4 (lower is better)
Translates to: FNSRRRSWGFDFFRRGFDVNSSL*WAAVCT
Trigger: TGTGCAAACAGCAGCCCAGCAGAGTGAGCTGTTGAC...ATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR CCA 90 bp GATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAACTAATTCGGGGAAGCGCCCGTaGTTCATGGCCATCATATGG +
Preference number: 4 (lower is better)
Translates to: DGSLCSNICPSKFMQPTNSGKRP*FMAIIW
Trigger: CCATATGATGGCCATGAACCACGGGCGCTTCCCCGA...ATTAGTTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CCA 90 bp CTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAAATCTGGCGTTGAAGGCGTGCTaGGGCTGCTGCTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LRSSCNQLMQFFLSLVNLALKAC*GCCCWW
Trigger: CCACCAGCAGCAGCAGCCCCAGCACGCCTTCAACGC...CAGATTTACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CCA 90 bp AATGTTTCTTTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGTGCCGCCGCTGTGCTTaGGGTTGCAATCTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: NVSFNSRRRSWGFDFFRRCRRCA*GCNLGS
Trigger: ACTTCCGAGATTGCAACCCCAAGCACAGCGGCGGCA...CCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAAAGAAACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CCA 90 bp TTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATAACAGCTCACTCTGCTaGGCTGCTGTTTGCACACGA +
Preference number: 4 (lower is better)
Translates to: FNSRRRSWGFDFFRRGFDNSSLC*AAVCTR
Trigger: TCGTGTGCAAACAGCAGCCCAGCAGAGTGAGCTGTT...ATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR CCA 90 bp AATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGATCACGCCGAAGAAGTTaGGGGTTTGATTTCTTTCGC +
Preference number: 4 (lower is better)
Translates to: NSRRRSWGFDFFRRGFDRSRRRS*GFDFFR
Trigger: GCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGA...TCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR TCA 90 bp AATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGACATAAGGGAGGTGGGTaGATGTCAAGGCTACAAAAA +
Preference number: 4 (lower is better)
Translates to: NSRRRSWGFDFFRRGFDRHKGGG*MSRLQK
Trigger: TTTTTGTAGCCTTGACATTCACCCACCTCCCTTATG...TCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp TTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATGGCCATCATATGGTCTaGCATTTCCAGTCCTTCCGT +
Preference number: 4 (lower is better)
Translates to: FNSRRRSWGFDFFRRGFDGHHMV*HFQSFR
Trigger: ACGGAAGGACTGGAAATGGCAGACCATATGATGGCC...ATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367651.4
ENST00000618718.1
CDS-3UTR GCA 90 bp TCTGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAGTTCATCTGGTGGCCTaGAGCAGGGTGCAAATCCGG +
Preference number: 4 (lower is better)
Translates to: SALRSSCNQLMQFFLSLVVHLVA*SRVQIR
Trigger: CCGGATTTGCACCCTGCTGCAGGCCACCAGATGAAC...TACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp TTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCTTGCAATCTCGGAAGTaGTGGTTTGTCCCGTTCATC +
Preference number: 4 (lower is better)
Translates to: LIHAEEVGGLISFAGVSILQSRK*WFVPFI
Trigger: GATGAACGGGACAAACCAGCACTTCCGAGATTGCAA...GATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR GCA 90 bp GATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAACTAATCGCTGTGCTTGGGGTTaGAATCTCGGAAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: DGSLCSNICPSKFMQPTNRCAWG*NLGSAG
Trigger: ACCAGCACTTCCGAGATTGCAACCCCAAGCACAGCG...ATTAGTTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp AATGTTTCTTTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGCGCTGTGCTTGGGGTTaGAATCTCGGAAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: NVSFNSRRRSWGFDFFRRRCAWG*NLGSAG
Trigger: ACCAGCACTTCCGAGATTGCAACCCCAAGCACAGCG...CCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAAAGAAACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp AGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAAAAATCAAACTCGTTTTaGCCCAGCCAGAGTTCGGGC +
Preference number: 4 (lower is better)
Translates to: SEMAVCAVISALRSSCNQKSNSF*PSQSSG
Trigger: GCCCGAACTCTGGCTGGGGCAAAACGAGTTTGATTT...TTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp TTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATAAATCAAACTCGTTTTaGCCCAGCCAGAGTTCGGGC +
Preference number: 4 (lower is better)
Translates to: FNSRRRSWGFDFFRRGFDKSNSF*PSQSSG
Trigger: GCCCGAACTCTGGCTGGGGCAAAACGAGTTTGATTT...ATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR GCA 90 bp GATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAACTAATCTCACTCTGCTGGGCTaGTGTTTGCACACGAAGTCC +
Preference number: 4 (lower is better)
Translates to: DGSLCSNICPSKFMQPTNLTLLG*CLHTKS
Trigger: GGACTTCGTGTGCAAACAGCAGCCCAGCAGAGTGAG...ATTAGTTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CCA 90 bp AAAGCCACCAAAGGGAACAACCACCCCCAAATGACTTCTAGAAAACAAGTTATTTCGGGGAAGCGCCCGTaGTTCATGGCCATCATATGG +
Preference number: 4 (lower is better)
Translates to: KATKGNNHPQMTSRKQVISGKRP*FMAIIW
Trigger: CCATATGATGGCCATGAACCACGGGCGCTTCCCCGA...AATAACTTGTTTTCTAGAAGTCATTTGGGGGTGGTTGTTCCCTTTGGTGGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367651.4
CDS-3UTR CCA 90 bp AAAGCCACCAAAGGGAACAACCACCCCCAAATGACTTCTAGAAAACAAGTTATTTGCCGCCGCTGTGCTTaGGGTTGCAATCTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: KATKGNNHPQMTSRKQVICRRCA*GCNLGS
Trigger: ACTTCCGAGATTGCAACCCCAAGCACAGCGGCGGCA...AATAACTTGTTTTCTAGAAGTCATTTGGGGGTGGTTGTTCCCTTTGGTGGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367651.4
CDS-3UTR TCA 90 bp TCTGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAGTTCGGGCAGCTCCTTaGTGCGGTCCAAACCCATTT +
Preference number: 4 (lower is better)
Translates to: SALRSSCNQLMQFFLSLVVRAAP*CGPNPF
Trigger: AAATGGGTTTGGACCGCATCAAGGAGCTGCCCGAAC...TACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR TCA 90 bp TTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATAAGAAGTTGGGGGTTTaGTTTCTTTCGCCGGGGTTT +
Preference number: 4 (lower is better)
Translates to: FNSRRRSWGFDFFRRGFDKKLGV*FLSPGF
Trigger: AAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTT...ATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR TCA 90 bp TTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCCATAAGGGAGGTGGGTaGATGTCAAGGCTACAAAAA +
Preference number: 4 (lower is better)
Translates to: LIHAEEVGGLISFAGVSIHKGGG*MSRLQK
Trigger: TTTTTGTAGCCTTGACATTCACCCACCTCCCTTATG...GATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp ATGCAGTTCAGTCATTTGAAACCATCTACAAAATCCACAAGATTAAGCAGTTTGGGGACCTTCCTGGCGTaGAAAGCGCTTCGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: MQFSHLKPSTKSTRLSSLGTFLA*KALRCR
Trigger: GCGACAGCGAAGCGCTTTGCACGCCAGGAAGGTCCC...CAAACTGCTTAATCTTGTGGATTTTGTAGATGGTTTCAAATGACTGAACTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367651.4
CDS-3UTR GCA 90 bp TTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCAGTCCTTCCGTTTTTaGGATTTCTGCTCCGAAGAC +
Preference number: 4 (lower is better)
Translates to: FNSRRRSWGFDFFRRGFDQSFRF*DFCSED
Trigger: GTCTTCGGAGCAGAAATCGCAAAAACGGAAGGACTG...ATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000367651.4
ENST00000618718.1
CDS-3UTR GCA 90 bp AATGTTTCTTTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGTCGTGGCATTCATGTTaGCCGCGCCGTAGTGTATGT +
Preference number: 4 (lower is better)
Translates to: NVSFNSRRRSWGFDFFRRSWHSC*PRRSVC
Trigger: ACATACACTACGGCGCGGGCAACATGAATGCCACGA...CCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAAAGAAACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp TGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAAATGGTTGTTGAGCTTCTaGAGCTGCATGCTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: CPSKFMQPTNAIFPFTRKWLLSF*SCMLAG
Trigger: GCCGGCCAGCATGCAGCTGCAGAAGCTCAACAACCA...TTTACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp TGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTGTTCATCTGGTGGCCTaGAGCAGGGTGCAAATCCGG +
Preference number: 4 (lower is better)
Translates to: CSNICPSKFMQPTNAIFPVHLVA*SRVQIR
Trigger: CCGGATTTGCACCCTGCTGCAGGCCACCAGATGAAC...AGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp TCTGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTACTCACTCTGCTGGGCTaGTGTTTGCACACGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SALRSSCNQLMQFFLSLVLTLLG*CLHTKS
Trigger: GGACTTCGTGTGCAAACAGCAGCCCAGCAGAGTGAG...TACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp GATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAACTAATGTCAACAGCTCACTCTaGTGGGCTGCTGTTTGCACA +
Preference number: 4 (lower is better)
Translates to: DGSLCSNICPSKFMQPTNVNSSL*WAAVCT
Trigger: TGTGCAAACAGCAGCCCAGCAGAGTGAGCTGTTGAC...ATTAGTTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp AATGTTTCTTTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGTCAACAGCTCACTCTaGTGGGCTGCTGTTTGCACA +
Preference number: 4 (lower is better)
Translates to: NVSFNSRRRSWGFDFFRRVNSSL*WAAVCT
Trigger: TGTGCAAACAGCAGCCCAGCAGAGTGAGCTGTTGAC...CCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAAAGAAACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp ATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGAGTTGTGCAGTAATATCTaGCCTTCGAAGTTCATGCAA +
Preference number: 4 (lower is better)
Translates to: IHAEEVGGLISFAGVSIELCSNI*PSKFMQ
Trigger: TTGCATGAACTTCGAAGGGCAGATATTACTGCACAA...CTCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp TTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATGGCCATCATATGGTCTaGCATTTCCAGTCCACTCAT +
Preference number: 4 (lower is better)
Translates to: FNSRRRSWGFDFFRRGFDGHHMV*HFQSTH
Trigger: ATGAGTGGACTGGAAATGGCAGACCATATGATGGCC...ATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537332.2
CDS-3UTR CCA 90 bp TCTAAGGGAATGTTTCTTTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTGTCCCGTTCATCTGGTaGCCTGCAGCAGGGTGCAAA +
Preference number: 4 (lower is better)
Translates to: SKGMFLLIHAEEVGGLISVPFIW*PAAGCK
Trigger: TTTGCACCCTGCTGCAGGCCACCAGATGAACGGGAC...AGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAAAGAAACATTCCCTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CCA 90 bp TGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTTGTCCCGTTCATCTaGTGGCCTGCAGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: CSNICPSKFMQPTNAIFPFVPFI*WPAAGC
Trigger: GCACCCTGCTGCAGGCCACCAGATGAACGGGACAAA...AGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CCA 90 bp TGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTGCCGCCGCTGTGCTTaGGGTTGCAATCTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: CSNICPSKFMQPTNAIFPCRRCA*GCNLGS
Trigger: ACTTCCGAGATTGCAACCCCAAGCACAGCGGCGGCA...AGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CCA 90 bp GATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAACTAATAACAGCTCACTCTGCTaGGCTGCTGTTTGCACACGA +
Preference number: 4 (lower is better)
Translates to: DGSLCSNICPSKFMQPTNNSSLC*AAVCTR
Trigger: TCGTGTGCAAACAGCAGCCCAGCAGAGTGAGCTGTT...ATTAGTTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CCA 90 bp TTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATTCACGCCGAAGAAGTTaGGGGTTTGATTTCTTTCGC +
Preference number: 4 (lower is better)
Translates to: FNSRRRSWGFDFFRRGFDSRRRS*GFDFFR
Trigger: GCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGA...ATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR GCA 90 bp TGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAAACGTTTTTGCGATTTCTaGTCCGAAGACCGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: CPSKFMQPTNAIFPFTRKRFCDF*SEDRGR
Trigger: CCGCCCTCGGTCTTCGGAGCAGAAATCGCAAAAACG...TTTACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367651.4
CDS-3UTR GCA 90 bp CTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAAATCTGTGGTTGTTGAGCTTCTaGAGCTGCATGCTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: LRSSCNQLMQFFLSLVNLWLLSF*SCMLAG
Trigger: GCCGGCCAGCATGCAGCTGCAGAAGCTCAACAACCA...CAGATTTACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp GATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAACTAATAAATCAAACTCGTTTTaGCCCAGCCAGAGTTCGGGC +
Preference number: 4 (lower is better)
Translates to: DGSLCSNICPSKFMQPTNKSNSF*PSQSSG
Trigger: GCCCGAACTCTGGCTGGGGCAAAACGAGTTTGATTT...ATTAGTTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp AATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGAGCCCTTCGAAGTTCATaGAACCAACTAATGCAATTT +
Preference number: 4 (lower is better)
Translates to: NSRRRSWGFDFFRRGFDRALRSS*NQLMQF
Trigger: AAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGC...TCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp AATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGATTGTGCAGTAATATCTaGCCTTCGAAGTTCATGCAA +
Preference number: 4 (lower is better)
Translates to: NSRRRSWGFDFFRRGFDRLCSNI*PSKFMQ
Trigger: TTGCATGAACTTCGAAGGGCAGATATTACTGCACAA...TCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp TTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCTCCTCATCCTGTTGTTaGACATCCTGTTGTTATTCC +
Preference number: 4 (lower is better)
Translates to: LIHAEEVGGLISFAGVSISSSCC*TSCCYS
Trigger: GGAATAACAACAGGATGTGCAACAACAGGATGAGGA...GATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536159.2
CDS-3UTR CCA 90 bp TTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATTTCATGGCCATCATATaGTCTGCCATTTCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: FNSRRRSWGFDFFRRGFDFMAII*SAISSP
Trigger: AGGACTGGAAATGGCAGACCATATGATGGCCATGAA...ATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367651.4
ENST00000618718.1
CDS-3UTR CCA 90 bp TCTGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAAACAGCTCACTCTGCTaGGCTGCTGTTTGCACACGA +
Preference number: 4 (lower is better)
Translates to: SALRSSCNQLMQFFLSLVNSSLC*AAVCTR
Trigger: TCGTGTGCAAACAGCAGCCCAGCAGAGTGAGCTGTT...TACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR TCA 90 bp TTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCTCAAGATCTGAAAAGTaGGATACTGTGTCTAAGGGA +
Preference number: 4 (lower is better)
Translates to: LIHAEEVGGLISFAGVSISRSEK*DTVSKG
Trigger: TCCCTTAGACACAGTATCTCACTTTTCAGATCTTGA...GATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR TCA 90 bp TTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCTTAATATCTAACAGTTaGGCACTGGAGAAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: LIHAEEVGGLISFAGVSILISNS*ALEKVR
Trigger: CCTCACTTTCTCCAGTGCTCAACTGTTAGATATTAA...GATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp TGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTCGTGGCATTCATGTTaGCCGCGCCGTAGTGTATGT +
Preference number: 4 (lower is better)
Translates to: CSNICPSKFMQPTNAIFPSWHSC*PRRSVC
Trigger: ACATACACTACGGCGCGGGCAACATGAATGCCACGA...AGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp TCTGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAAAATCAAACTCGTTTTaGCCCAGCCAGAGTTCGGGC +
Preference number: 4 (lower is better)
Translates to: SALRSSCNQLMQFFLSLVKSNSF*PSQSSG
Trigger: GCCCGAACTCTGGCTGGGGCAAAACGAGTTTGATTT...TACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp TGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAAAGTCAACAGCTCACTCTaGTGGGCTGCTGTTTGCACA +
Preference number: 4 (lower is better)
Translates to: CPSKFMQPTNAIFPFTRKVNSSL*WAAVCT
Trigger: TGTGCAAACAGCAGCCCAGCAGAGTGAGCTGTTGAC...TTTACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp AATGTTTCTTTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGCGAGATGGCAGTTTGTaGAGTAATATCTGCCCTTCG +
Preference number: 4 (lower is better)
Translates to: NVSFNSRRRSWGFDFFRRRDGSL*SNICPS
Trigger: CGAAGGGCAGATATTACTGCACAAACTGCCATCTCG...CCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAAAGAAACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CCA 90 bp ATGCAGTTCAGTCATTTGAAACCATCTACAAAATCCACAAGATTAAGCAGTTTGTCGGGGAAGCGCCCGTaGTTCATGGCCATCATATGG +
Preference number: 4 (lower is better)
Translates to: MQFSHLKPSTKSTRLSSLSGKRP*FMAIIW
Trigger: CCATATGATGGCCATGAACCACGGGCGCTTCCCCGA...CAAACTGCTTAATCTTGTGGATTTTGTAGATGGTTTCAAATGACTGAACTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CCA 90 bp ACAATGATAACAATGAAGCATTATGCCAATTATGTTAAATCCTGCTCTCCGCTTTTTGTCCCGTTCATCTaGTGGCCTGCAGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: TMITMKHYANYVKSCSPLFVPFI*WPAAGC
Trigger: GCACCCTGCTGCAGGCCACCAGATGAACGGGACAAA...AAGCGGAGAGCAGGATTTAACATAATTGGCATAATGCTTCATTGTTATCATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367651.4
CDS-3UTR GCA 90 bp CTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAAATCTGTCGTGGCATTCATGTTaGCCGCGCCGTAGTGTATGT +
Preference number: 4 (lower is better)
Translates to: LRSSCNQLMQFFLSLVNLSWHSC*PRRSVC
Trigger: ACATACACTACGGCGCGGGCAACATGAATGCCACGA...CAGATTTACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp ATGCAGTTCAGTCATTTGAAACCATCTACAAAATCCACAAGATTAAGCAGTTTGCTCACTCTGCTGGGCTaGTGTTTGCACACGAAGTCC +
Preference number: 4 (lower is better)
Translates to: MQFSHLKPSTKSTRLSSLLTLLG*CLHTKS
Trigger: GGACTTCGTGTGCAAACAGCAGCCCAGCAGAGTGAG...CAAACTGCTTAATCTTGTGGATTTTGTAGATGGTTTCAAATGACTGAACTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp AGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAAGCCCTTCGAAGTTCATaGAACCAACTAATGCAATTT +
Preference number: 4 (lower is better)
Translates to: SEMAVCAVISALRSSCNQALRSS*NQLMQF
Trigger: AAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGC...TTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CCA 90 bp ACAATGATAACAATGAAGCATTATGCCAATTATGTTAAATCCTGCTCTCCGCTTAGCGCCCGTGGTTCATaGCCATCATATGGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: TMITMKHYANYVKSCSPLSARGS*PSYGLP
Trigger: TGGCAGACCATATGATGGCCATGAACCACGGGCGCT...AAGCGGAGAGCAGGATTTAACATAATTGGCATAATGCTTCATTGTTATCATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367651.4
CDS-3UTR TCA 90 bp TGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAAAAAGAAGTTGGGGGTTTaGTTTCTTTCGCCGGGGTTT +
Preference number: 4 (lower is better)
Translates to: CPSKFMQPTNAIFPFTRKKKLGV*FLSPGF
Trigger: AAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTT...TTTACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR TCA 90 bp TTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATAAACCTTTCAAGATCTaGAAAGTGAGATACTGTGTC +
Preference number: 4 (lower is better)
Translates to: FNSRRRSWGFDFFRRGFDKPFKI*KVRYCV
Trigger: GACACAGTATCTCACTTTTCAGATCTTGAAAGGTTT...ATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp TGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAAACGAGATGGCAGTTTGTaGAGTAATATCTGCCCTTCG +
Preference number: 4 (lower is better)
Translates to: CPSKFMQPTNAIFPFTRKRDGSL*SNICPS
Trigger: CGAAGGGCAGATATTACTGCACAAACTGCCATCTCG...TTTACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CCA 90 bp CTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAAATCTGCAATCTCGGAAGTGCTaGTTTGTCCCGTTCATCTGG +
Preference number: 4 (lower is better)
Translates to: LRSSCNQLMQFFLSLVNLQSRKC*FVPFIW
Trigger: CCAGATGAACGGGACAAACCAGCACTTCCGAGATTG...CAGATTTACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CCA 90 bp TGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTCACGCCGAAGAAGTTaGGGGTTTGATTTCTTTCGC +
Preference number: 4 (lower is better)
Translates to: CSNICPSKFMQPTNAIFPSRRRS*GFDFFR
Trigger: GCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGA...AGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR TCA 90 bp GATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAACTAATTCAAGATCTGAAAAGTaGGATACTGTGTCTAAGGGA +
Preference number: 4 (lower is better)
Translates to: DGSLCSNICPSKFMQPTNSRSEK*DTVSKG
Trigger: TCCCTTAGACACAGTATCTCACTTTTCAGATCTTGA...ATTAGTTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR TCA 90 bp TCTGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTACAACTTTGCAGCTTTTaGTTAAAGCACACCAAGAGG +
Preference number: 4 (lower is better)
Translates to: SALRSSCNQLMQFFLSLVQLCSF*LKHTKR
Trigger: CCTCTTGGTGTGCTTTAATCAAAAGCTGCAAAGTTG...TACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367651.4
CDS-3UTR GCA 90 bp ATGCAGTTCAGTCATTTGAAACCATCTACAAAATCCACAAGATTAAGCAGTTTGGGCCATCATATGGTCTaGCATTTCCAGTCCTTCCGT +
Preference number: 4 (lower is better)
Translates to: MQFSHLKPSTKSTRLSSLGHHMV*HFQSFR
Trigger: ACGGAAGGACTGGAAATGGCAGACCATATGATGGCC...CAAACTGCTTAATCTTGTGGATTTTGTAGATGGTTTCAAATGACTGAACTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367651.4
CDS-3UTR GCA 90 bp GATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAACTAATGCCCTTCGAAGTTCATaGAACCAACTAATGCAATTT +
Preference number: 4 (lower is better)
Translates to: DGSLCSNICPSKFMQPTNALRSS*NQLMQF
Trigger: AAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGC...ATTAGTTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp ATGCAGTTCAGTCATTTGAAACCATCTACAAAATCCACAAGATTAAGCAGTTTGGGCCATCATATGGTCTaGCATTTCCAGTCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: MQFSHLKPSTKSTRLSSLGHHMV*HFQSSG
Trigger: GCCTGAAGACTGGAAATGGCAGACCATATGATGGCC...CAAACTGCTTAATCTTGTGGATTTTGTAGATGGTTTCAAATGACTGAACTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536159.2
CDS-3UTR CCA 90 bp TGCCCATTGAAAAAGATAATGTTGAGTATTGCAAACCTTTCTAACTCTGGAGTACAATCTCGGAAGTGCTaGTTTGTCCCGTTCATCTGG +
Preference number: 4 (lower is better)
Translates to: CPLKKIMLSIANLSNSGVQSRKC*FVPFIW
Trigger: CCAGATGAACGGGACAAACCAGCACTTCCGAGATTG...TACTCCAGAGTTAGAAAGGTTTGCAATACTCAACATTATCTTTTTCAATGGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367651.4
CDS-3UTR TCA 90 bp ATGCAGTTCAGTCATTTGAAACCATCTACAAAATCCACAAGATTAAGCAGTTTGAAGAAGTTGGGGGTTTaGTTTCTTTCGCCGGGGTTT +
Preference number: 4 (lower is better)
Translates to: MQFSHLKPSTKSTRLSSLKKLGV*FLSPGF
Trigger: AAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTT...CAAACTGCTTAATCTTGTGGATTTTGTAGATGGTTTCAAATGACTGAACTGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp ATGCAGTTCAGTCATTTGAAACCATCTACAAAATCCACAAGATTAAGCAGTTTGTTGCAATCTCGGAAGTaGTGGTTTGTCCCGTTCATC +
Preference number: 4 (lower is better)
Translates to: MQFSHLKPSTKSTRLSSLLQSRK*WFVPFI
Trigger: GATGAACGGGACAAACCAGCACTTCCGAGATTGCAA...CAAACTGCTTAATCTTGTGGATTTTGTAGATGGTTTCAAATGACTGAACTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp TCTGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTATTGTGCAGTAATATCTaGCCTTCGAAGTTCATGCAA +
Preference number: 4 (lower is better)
Translates to: SALRSSCNQLMQFFLSLVLCSNI*PSKFMQ
Trigger: TTGCATGAACTTCGAAGGGCAGATATTACTGCACAA...TACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CCA 90 bp CTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAAATCTGTTCATGGCCATCATATaGTCTGCCATTTCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: LRSSCNQLMQFFLSLVNLFMAII*SAISSP
Trigger: TGGACTGGAAATGGCAGACCATATGATGGCCATGAA...CAGATTTACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537332.2
CDS-3UTR CCA 90 bp TCTAAGGGAATGTTTCTTTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCATGGCCATCATATaGTCTGCCATTTCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: SKGMFLLIHAEEVGGLISFMAII*SAISSL
Trigger: AAGACTGGAAATGGCAGACCATATGATGGCCATGAA...AGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAAAGAAACATTCCCTTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536159.2
CDS-3UTR TCA 90 bp TGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAAATCAAGATCTGAAAAGTaGGATACTGTGTCTAAGGGA +
Preference number: 4 (lower is better)
Translates to: CPSKFMQPTNAIFPFTRKSRSEK*DTVSKG
Trigger: TCCCTTAGACACAGTATCTCACTTTTCAGATCTTGA...TTTACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR TCA 90 bp TGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTAATATCTAACAGTTaGGCACTGGAGAAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: CSNICPSKFMQPTNAIFPLISNS*ALEKVR
Trigger: CCTCACTTTCTCCAGTGCTCAACTGTTAGATATTAA...AGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR TCA 90 bp TGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAAATTAATATCTAACAGTTaGGCACTGGAGAAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: CPSKFMQPTNAIFPFTRKLISNS*ALEKVR
Trigger: CCTCACTTTCTCCAGTGCTCAACTGTTAGATATTAA...TTTACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR TCA 90 bp TGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAAAACAACCACCCCCAAATaGCTTCTAGAAAACAAGTTA +
Preference number: 4 (lower is better)
Translates to: CPSKFMQPTNAIFPFTRKTTTPK*LLENKL
Trigger: TAACTTGTTTTCTAGAAGTCATTTGGGGGTGGTTGT...TTTACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000367651.4
CDS-3UTR CCA 90 bp ATGCAGTTCAGTCATTTGAAACCATCTACAAAATCCACAAGATTAAGCAGTTTGTTCATGGCCATCATATaGTCTGCCATTTCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: MQFSHLKPSTKSTRLSSLFMAII*SAISSP
Trigger: AGGACTGGAAATGGCAGACCATATGATGGCCATGAA...CAAACTGCTTAATCTTGTGGATTTTGTAGATGGTTTCAAATGACTGAACTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367651.4
3UTR CAA 72 bp AAAGTGAACAGTATGACTTTCCTGATCCAGAACAGTTaGGCCCACATCTGTTTAATCTTCCAGTTTAGCATA +
Preference number: 4 (lower is better)
Translates to: KVNSMTFLIQNS*AHICLIFQFSI
Trigger: TATGCTAAACTGGAAGATTAAACAGATGTGGGCCAAACTGTTCTGGATCAGGAAAGTCATACTGTTCACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR TCA 90 bp TCTAAGGGAATGTTTCTTTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTAAACCTTTCAAGATCTaGAAAGTGAGATACTGTGTC +
Preference number: 4 (lower is better)
Translates to: SKGMFLLIHAEEVGGLISKPFKI*KVRYCV
Trigger: GACACAGTATCTCACTTTTCAGATCTTGAAAGGTTT...AGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAAAGAAACATTCCCTTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR GCA 90 bp TATGCCAATTATGTTAAATCCTGCTCTCCGCTTAAGCTCATCATGACCTGTTTTAATTATGTTAAATCCTaGTCTCCGCTTAAGCTCATC +
Preference number: 4 (lower is better)
Translates to: YANYVKSCSPLKLIMTCFNYVKS*SPLKLI
Trigger: GATGAGCTTAAGCGGAGAGCAGGATTTAACATAATT...AAAACAGGTCATGATGAGCTTAAGCGGAGAGCAGGATTTAACATAATTGGCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367651.4
CDS-3UTR TCA 90 bp CTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAAATCTGAAACCTTTCAAGATCTaGAAAGTGAGATACTGTGTC +
Preference number: 4 (lower is better)
Translates to: LRSSCNQLMQFFLSLVNLKPFKI*KVRYCV
Trigger: GACACAGTATCTCACTTTTCAGATCTTGAAAGGTTT...CAGATTTACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS GCA 90 bp CGCCCGAGCCGCCGGGGGTGCTGCTGCCGCCGCTGTGCTTGGGGTTaGAATCTCGGAAGTGCTGGTTTGTCCCGTTCATCTGGTGGCCTG +
Preference number: 5 (lower is better)
Translates to: RPSRRGCCCRRCAWG*NLGSAGLSRSSGGL
Trigger: CAGGCCACCAGATGAACGGGACAAACCAGCACTTCCGAGATTGCAACCCCAAGCACAGCGGCGGCAGCAGCACCCCCGGCGGCTCGGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS CCA 90 bp AAATCAGTGTCTATGACATTGGGCGGCAGCATTGCAGCGGGGACGTaGGCCACGGAGGCGGGCATGTTGCCGCTGCCGCTGCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: KSVSMTLGGSIAAGT*ATEAGMLPLPLPPP
Trigger: CGGCGGCGGCAGCGGCAGCGGCAACATGCCCGCCTCCGTGGCCCACGTCCCCGCTGCAATGCTGCCGCCCAATGTCATAGACACTGATTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS GCA 90 bp CGTCCAGGACCGGCTCAGCAGCACATAGAGGGGACCTTCCTGGCGTaGAAAGCGCTTCGCTGTCGCGATGTCGGCGCCGAGGTCTCGCAG +
Preference number: 5 (lower is better)
Translates to: RPGPAQQHIEGTFLA*KALRCRDVGAEVSQ
Trigger: CTGCGAGACCTCGGCGCCGACATCGCGACAGCGAAGCGCTTTGCACGCCAGGAAGGTCCCCTCTATGTGCTGCTGAGCCGGTCCTGGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367651.4
ENST00000618718.1
CDS CCA 90 bp CGCTTCGCTGTCGCGATGTCGGCGCCGAGGTCTCGCAGCGGCCGCTaGGGCAGATTCGGAGCCGTTCCCTTTTATTTCCCCTCCGTTGCC +
Preference number: 5 (lower is better)
Translates to: RFAVAMSAPRSRSGR*GRFGAVPFYFPSVA
Trigger: GGCAACGGAGGGGAAATAAAAGGGAACGGCTCCGAATCTGCCCCAGCGGCCGCTGCGAGACCTCGGCGCCGACATCGCGACAGCGAAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367651.4
ENST00000618718.1
CDS GCA 90 bp GCCCCATGCCCATGCGGTGGGCAGGGTGATGGTGCAGCCCATTGGTaGCGTCGGGGAAGCGCCCGTGGTTCATGGCCATCATATGGTCTG +
Preference number: 5 (lower is better)
Translates to: APCPCGGQGDGAAHW*RRGSARGSWPSYGL
Trigger: CAGACCATATGATGGCCATGAACCACGGGCGCTTCCCCGACGGCACCAATGGGCTGCACCATCACCCTGCCCACCGCATGGGCATGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS CCA 90 bp ACTGCCCCATGCCCATGCGGTGGGCAGGGTGATGGTGCAGCCCATTaGTGCCGTCGGGGAAGCGCCCGTGGTTCATGGCCATCATATGGT +
Preference number: 5 (lower is better)
Translates to: TAPCPCGGQGDGAAH*CRRGSARGSWPSYG
Trigger: ACCATATGATGGCCATGAACCACGGGCGCTTCCCCGACGGCACCAATGGGCTGCACCATCACCCTGCCCACCGCATGGGCATGGGGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS GCA 90 bp GGGGTGCTGCTGCCGCCGCTGTGCTTGGGGTTGCAATCTCGGAAGTaGTGGTTTGTCCCGTTCATCTGGTGGCCTGCAGCAGGGTGCAAA +
Preference number: 5 (lower is better)
Translates to: GVLLPPLCLGLQSRK*WFVPFIWWPAAGCK
Trigger: TTTGCACCCTGCTGCAGGCCACCAGATGAACGGGACAAACCAGCACTTCCGAGATTGCAACCCCAAGCACAGCGGCGGCAGCAGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS CCA 90 bp GTGCTGCTGCCGCCGCTGTGCTTGGGGTTGCAATCTCGGAAGTGCTaGTTTGTCCCGTTCATCTGGTGGCCTGCAGCAGGGTGCAAATCC +
Preference number: 5 (lower is better)
Translates to: VLLPPLCLGLQSRKC*FVPFIWWPAAGCKS
Trigger: GGATTTGCACCCTGCTGCAGGCCACCAGATGAACGGGACAAACCAGCACTTCCGAGATTGCAACCCCAAGCACAGCGGCGGCAGCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS GCA 90 bp GTTGCAATCTCGGAAGTGCTGGTTTGTCCCGTTCATCTGGTGGCCTaGAGCAGGGTGCAAATCCGGCATGTAGTGGTTGTGGGGGTAGGG +
Preference number: 5 (lower is better)
Translates to: VAISEVLVCPVHLVA*SRVQIRHVVVVGVG
Trigger: CCCTACCCCCACAACCACTACATGCCGGATTTGCACCCTGCTGCAGGCCACCAGATGAACGGGACAAACCAGCACTTCCGAGATTGCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS CCA 90 bp GATGGTGCAGCCCATTGGTGCCGTCGGGGAAGCGCCCGTGGTTCATaGCCATCATATGGTCTGCCATTTCCAGTCCTTCCGTTTTTGCGA +
Preference number: 5 (lower is better)
Translates to: DGAAHWCRRGSARGS*PSYGLPFPVLPFLR
Trigger: TCGCAAAAACGGAAGGACTGGAAATGGCAGACCATATGATGGCCATGAACCACGGGCGCTTCCCCGACGGCACCAATGGGCTGCACCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367651.4
ENST00000618718.1
CDS-3UTR CAA 90 bp AATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGATCGCCCATTAGGGCGTaGAAGGCGTGCTGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: NSRRRSWGFDFFRRGFDRSPIRA*KACWGC
Trigger: GCAGCCCCAGCACGCCTTCAACGCCCTAATGGGCGA...TCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR CAA 90 bp AATGTTTCTTTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGACGGAGGCGGGCATGTaGCCGCTGCCGCTGCCGCCG +
Preference number: 5 (lower is better)
Translates to: NVSFNSRRRSWGFDFFRRTEAGM*PLPLPP
Trigger: CGGCGGCAGCGGCAGCGGCAACATGCCCGCCTCCGT...CCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAAAGAAACATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp TTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCCATTGGGCGGCAGCATaGCAGCGGGGACGTGGGCCA +
Preference number: 5 (lower is better)
Translates to: LIHAEEVGGLISFAGVSIHWAAA*QRGRGP
Trigger: TGGCCCACGTCCCCGCTGCAATGCTGCCGCCCAATG...GATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp TCTGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAACGGAGGCGGGCATGTaGCCGCTGCCGCTGCCGCCG +
Preference number: 5 (lower is better)
Translates to: SALRSSCNQLMQFFLSLVTEAGM*PLPLPP
Trigger: CGGCGGCAGCGGCAGCGGCAACATGCCCGCCTCCGT...TACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS GCA 90 bp GGCTGCTGTTTGCACACGAAGTCCGTCATAAAATCAAACTCGTTTTaGCCCAGCCAGAGTTCGGGCAGCTCCTTGATGCGGTCCAAACCC +
Preference number: 5 (lower is better)
Translates to: GCCLHTKSVIKSNSF*PSQSSGSSLMRSKP
Trigger: GGGTTTGGACCGCATCAAGGAGCTGCCCGAACTCTGGCTGGGGCAAAACGAGTTTGATTTTATGACGGACTTCGTGTGCAAACAGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR CAA 90 bp ATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGAGCTCGGAAGTGCTGGTTaGTCCCGTTCATCTGGTGGC +
Preference number: 5 (lower is better)
Translates to: IHAEEVGGLISFAGVSIELGSAG*SRSSGG
Trigger: GCCACCAGATGAACGGGACAAACCAGCACTTCCGAG...CTCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR CAA 90 bp AATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGACCGCTGTGCTTGGGGTaGCAATCTCGGAAGTGCTGG +
Preference number: 5 (lower is better)
Translates to: NSRRRSWGFDFFRRGFDRPLCLG*QSRKCW
Trigger: CCAGCACTTCCGAGATTGCAACCCCAAGCACAGCGG...TCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp TTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCCTGCCGCCGCTGTGCTaGGGGTTGCAATCTCGGAAG +
Preference number: 5 (lower is better)
Translates to: LIHAEEVGGLISFAGVSILPPLC*GLQSRK
Trigger: CTTCCGAGATTGCAACCCCAAGCACAGCGGCGGCAG...GATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp AATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGACTCGGAAGTGCTGGTTaGTCCCGTTCATCTGGTGGC +
Preference number: 5 (lower is better)
Translates to: NSRRRSWGFDFFRRGFDRLGSAG*SRSSGG
Trigger: GCCACCAGATGAACGGGACAAACCAGCACTTCCGAG...TCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR CAA 90 bp GATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAACTAATCATTGGGCGGCAGCATaGCAGCGGGGACGTGGGCCA +
Preference number: 5 (lower is better)
Translates to: DGSLCSNICPSKFMQPTNHWAAA*QRGRGP
Trigger: TGGCCCACGTCCCCGCTGCAATGCTGCCGCCCAATG...ATTAGTTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp TTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCCTCGGAAGTGCTGGTTaGTCCCGTTCATCTGGTGGC +
Preference number: 5 (lower is better)
Translates to: LIHAEEVGGLISFAGVSILGSAG*SRSSGG
Trigger: GCCACCAGATGAACGGGACAAACCAGCACTTCCGAG...GATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR CAA 90 bp ATGCAGTTCAGTCATTTGAAACCATCTACAAAATCCACAAGATTAAGCAGTTTGACGGAGGCGGGCATGTaGCCGCTGCCGCTGCCGCCG +
Preference number: 5 (lower is better)
Translates to: MQFSHLKPSTKSTRLSSLTEAGM*PLPLPP
Trigger: CGGCGGCAGCGGCAGCGGCAACATGCCCGCCTCCGT...CAAACTGCTTAATCTTGTGGATTTTGTAGATGGTTTCAAATGACTGAACTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp AATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGAAGTTCGGGCAGCTCCTaGATGCGGTCCAAACCCATT +
Preference number: 5 (lower is better)
Translates to: NSRRRSWGFDFFRRGFDRSSGSS*MRSKPI
Trigger: AATGGGTTTGGACCGCATCAAGGAGCTGCCCGAACT...TCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR CAA 90 bp AATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGACTGCTGGGCTGCTGTTaGCACACGAAGTCCGTCATA +
Preference number: 5 (lower is better)
Translates to: NSRRRSWGFDFFRRGFDRLLGCC*HTKSVI
Trigger: TATGACGGACTTCGTGTGCAAACAGCAGCCCAGCAG...TCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR CAA 90 bp TGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAAACATTGGGCGGCAGCATaGCAGCGGGGACGTGGGCCA +
Preference number: 5 (lower is better)
Translates to: CPSKFMQPTNAIFPFTRKHWAAA*QRGRGP
Trigger: TGGCCCACGTCCCCGCTGCAATGCTGCCGCCCAATG...TTTACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp TTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCAGTTCGGGCAGCTCCTaGATGCGGTCCAAACCCATT +
Preference number: 5 (lower is better)
Translates to: LIHAEEVGGLISFAGVSISSGSS*MRSKPI
Trigger: AATGGGTTTGGACCGCATCAAGGAGCTGCCCGAACT...GATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR CAA 90 bp TTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCCTGCTGGGCTGCTGTTaGCACACGAAGTCCGTCATA +
Preference number: 5 (lower is better)
Translates to: LIHAEEVGGLISFAGVSILLGCC*HTKSVI
Trigger: TATGACGGACTTCGTGTGCAAACAGCAGCCCAGCAG...GATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR CAA 90 bp ATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGAGGAAGAAGTTGGGGGTTaGATTTCTTTCGCCGGGGTT +
Preference number: 5 (lower is better)
Translates to: IHAEEVGGLISFAGVSIEEEVGG*ISFAGV
Trigger: AACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTC...CTCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR CAA 90 bp ATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGAGTCTATGACATTGGGGTaGCAATCTCGGAAGTGCTGG +
Preference number: 5 (lower is better)
Translates to: IHAEEVGGLISFAGVSIESMTLG*QSRKCW
Trigger: CCAGCACTTCCGAGATTGCAACCCCAATGTCATAGA...CTCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000618718.1
CDS-3UTR CAA 90 bp AATGTTTCTTTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGCCGCTGTGCTTGGGGTaGCAATCTCGGAAGTGCTGG +
Preference number: 5 (lower is better)
Translates to: NVSFNSRRRSWGFDFFRRPLCLG*QSRKCW
Trigger: CCAGCACTTCCGAGATTGCAACCCCAAGCACAGCGG...CCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAAAGAAACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp AGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAATCAGTGTCTATGACATaGGGCGGCAGCATTGCAGCG +
Preference number: 5 (lower is better)
Translates to: SEMAVCAVISALRSSCNQSVSMT*GGSIAA
Trigger: CGCTGCAATGCTGCCGCCCAATGTCATAGACACTGA...TTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp AATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGAAAAATCAAACTCGTTTaGCCCCAGCCAGAGTTCGGG +
Preference number: 5 (lower is better)
Translates to: NSRRRSWGFDFFRRGFDRKIKLV*PQPEFG
Trigger: CCCGAACTCTGGCTGGGGCAAAACGAGTTTGATTTT...TCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR CAA 90 bp TTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCTGCTGGGCTGCTGTTaGCACACGAAGTCCGTCATA +
Preference number: 5 (lower is better)
Translates to: FNSRRRSWGFDFFRRGFDLLGCC*HTKSVI
Trigger: TATGACGGACTTCGTGTGCAAACAGCAGCCCAGCAG...ATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR CAA 90 bp AATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGAGAAGAAGTTGGGGGTTaGATTTCTTTCGCCGGGGTT +
Preference number: 5 (lower is better)
Translates to: NSRRRSWGFDFFRRGFDREEVGG*ISFAGV
Trigger: AACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTC...TCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR CAA 90 bp CTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAAATCTGTCGCCCATTAGGGCGTaGAAGGCGTGCTGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: LRSSCNQLMQFFLSLVNLSPIRA*KACWGC
Trigger: GCAGCCCCAGCACGCCTTCAACGCCCTAATGGGCGA...CAGATTTACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp AATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGATGGTTGAAATACTGGTaGTTGAGCTTCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: NSRRRSWGFDFFRRGFDRWLKYW*LSFCSC
Trigger: GCAGCTGCAGAAGCTCAACAACCAGTATTTCAACCA...TCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR CAA 90 bp AATGTTTCTTTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGCTCGGAAGTGCTGGTTaGTCCCGTTCATCTGGTGGC +
Preference number: 5 (lower is better)
Translates to: NVSFNSRRRSWGFDFFRRLGSAG*SRSSGG
Trigger: GCCACCAGATGAACGGGACAAACCAGCACTTCCGAG...CCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAAAGAAACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp AATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGAAAGCGAGATGGCAGTTaGTGCAGTAATATCTGCCCT +
Preference number: 5 (lower is better)
Translates to: NSRRRSWGFDFFRRGFDRKRDGS*CSNICP
Trigger: AGGGCAGATATTACTGCACAAACTGCCATCTCGCTT...TCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp ATGCAGTTCAGTCATTTGAAACCATCTACAAAATCCACAAGATTAAGCAGTTTGTCGCCCATTAGGGCGTaGAAGGCGTGCTGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: MQFSHLKPSTKSTRLSSLSPIRA*KACWGC
Trigger: GCAGCCCCAGCACGCCTTCAACGCCCTAATGGGCGA...CAAACTGCTTAATCTTGTGGATTTTGTAGATGGTTTCAAATGACTGAACTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp TTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATGAAGAAGTTGGGGGTTaGATTTCTTTCGCCGGGGTT +
Preference number: 5 (lower is better)
Translates to: FNSRRRSWGFDFFRRGFDEEVGG*ISFAGV
Trigger: AACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTC...ATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR CAA 90 bp TTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCAAGCGAGATGGCAGTTaGTGCAGTAATATCTGCCCT +
Preference number: 5 (lower is better)
Translates to: LIHAEEVGGLISFAGVSIKRDGS*CSNICP
Trigger: AGGGCAGATATTACTGCACAAACTGCCATCTCGCTT...GATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp AATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGACTGATCCAGAACAGTTaGGCCCACATCTGTTTAATC +
Preference number: 5 (lower is better)
Translates to: NSRRRSWGFDFFRRGFDRLIQNS*AHICLI
Trigger: GATTAAACAGATGTGGGCCAAACTGTTCTGGATCAG...TCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp TTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATGCCCTCCTCATCCTGTaGTTGCACATCCTGTTGTTA +
Preference number: 5 (lower is better)
Translates to: FNSRRRSWGFDFFRRGFDALLIL*LHILLL
Trigger: TAACAACAGGATGTGCAACAACAGGATGAGGAGGGC...ATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536159.2
CDS-3UTR CAA 90 bp TTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCTCAGTGTCTATGACATaGGGGTTGCAATCTCGGAAG +
Preference number: 5 (lower is better)
Translates to: LIHAEEVGGLISFAGVSISVSMT*GLQSRK
Trigger: CTTCCGAGATTGCAACCCCAATGTCATAGACACTGA...GATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000618718.1
CDS-3UTR CAA 90 bp TTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCTTGAAATACTGGTTGTaGAGCTTCTGCAGCTGCATG +
Preference number: 5 (lower is better)
Translates to: LIHAEEVGGLISFAGVSILKYWL*SFCSCM
Trigger: CATGCAGCTGCAGAAGCTCAACAACCAGTATTTCAA...GATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR CAA 90 bp ATGCAGTTCAGTCATTTGAAACCATCTACAAAATCCACAAGATTAAGCAGTTTGCTGCCGCCGCTGTGCTaGGGGTTGCAATCTCGGAAG +
Preference number: 5 (lower is better)
Translates to: MQFSHLKPSTKSTRLSSLLPPLC*GLQSRK
Trigger: CTTCCGAGATTGCAACCCCAAGCACAGCGGCGGCAG...CAAACTGCTTAATCTTGTGGATTTTGTAGATGGTTTCAAATGACTGAACTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp TCTGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAAGTTCGGGCAGCTCCTaGATGCGGTCCAAACCCATT +
Preference number: 5 (lower is better)
Translates to: SALRSSCNQLMQFFLSLVSSGSS*MRSKPI
Trigger: AATGGGTTTGGACCGCATCAAGGAGCTGCCCGAACT...TACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp TGCCCATTGAAAAAGATAATGTTGAGTATTGCAAACCTTTCTAACTCTGGAGTACCCATGAACTGGGAGTaGTTAAACCTGGCCGCGGGG +
Preference number: 5 (lower is better)
Translates to: CPLKKIMLSIANLSNSGVPMNWE*LNLAAG
Trigger: CCCCGCGGCCAGGTTTAACAACTCCCAGTTCATGGG...TACTCCAGAGTTAGAAAGGTTTGCAATACTCAACATTATCTTTTTCAATGGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367651.4
CDS-3UTR CAA 90 bp TTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATTTGAAATACTGGTTGTaGAGCTTCTGCAGCTGCATG +
Preference number: 5 (lower is better)
Translates to: FNSRRRSWGFDFFRRGFDLKYWL*SFCSCM
Trigger: CATGCAGCTGCAGAAGCTCAACAACCAGTATTTCAA...ATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS-3UTR CAA 90 bp ATGCAGTTCAGTCATTTGAAACCATCTACAAAATCCACAAGATTAAGCAGTTTGCCGCTGTGCTTGGGGTaGCAATCTCGGAAGTGCTGG +
Preference number: 5 (lower is better)
Translates to: MQFSHLKPSTKSTRLSSLPLCLG*QSRKCW
Trigger: CCAGCACTTCCGAGATTGCAACCCCAAGCACAGCGG...CAAACTGCTTAATCTTGTGGATTTTGTAGATGGTTTCAAATGACTGAACTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp TGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAAATCAGTGTCTATGACATaGGGCGGCAGCATTGCAGCG +
Preference number: 5 (lower is better)
Translates to: CPSKFMQPTNAIFPFTRKSVSMT*GGSIAA
Trigger: CGCTGCAATGCTGCCGCCCAATGTCATAGACACTGA...TTTACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp TCTAAGGGAATGTTTCTTTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTAGTTCGGGCAGCTCCTaGATGCGGTCCAAACCCATT +
Preference number: 5 (lower is better)
Translates to: SKGMFLLIHAEEVGGLISSSGSS*MRSKPI
Trigger: AATGGGTTTGGACCGCATCAAGGAGCTGCCCGAACT...AGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAAAGAAACATTCCCTTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp TGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTCTGCTGGGCTGCTGTTaGCACACGAAGTCCGTCATA +
Preference number: 5 (lower is better)
Translates to: CSNICPSKFMQPTNAIFPLLGCC*HTKSVI
Trigger: TATGACGGACTTCGTGTGCAAACAGCAGCCCAGCAG...AGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp AATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGATTTGCCTCCTGCCCATaGAAAAAGATAATGTTGAGT +
Preference number: 5 (lower is better)
Translates to: NSRRRSWGFDFFRRGFDRFASCP*KKIMLS
Trigger: ACTCAACATTATCTTTTTCAATGGGCAGGAGGCAAA...TCGATCGAAACCCCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000367651.4
CDS-3UTR CAA 90 bp ACAATGATAACAATGAAGCATTATGCCAATTATGTTAAATCCTGCTCTCCGCTTTTTATTTCCCCTCCGTaGCCCTCACAGCTCGGCAGG +
Preference number: 5 (lower is better)
Translates to: TMITMKHYANYVKSCSPLFISPP*PSQLGR
Trigger: CCTGCCGAGCTGTGAGGGCAACGGAGGGGAAATAAA...AAGCGGAGAGCAGGATTTAACATAATTGGCATAATGCTTCATTGTTATCATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367651.4
CDS-3UTR CAA 90 bp CTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAAATCTGTCAGTGTCTATGACATaGGGCGGCAGCATTGCAGCG +
Preference number: 5 (lower is better)
Translates to: LRSSCNQLMQFFLSLVNLSVSMT*GGSIAA
Trigger: CGCTGCAATGCTGCCGCCCAATGTCATAGACACTGA...CAGATTTACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp TCTGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAAAAATCAAACTCGTTTaGCCCCAGCCAGAGTTCGGG +
Preference number: 5 (lower is better)
Translates to: SALRSSCNQLMQFFLSLVKIKLV*PQPEFG
Trigger: CCCGAACTCTGGCTGGGGCAAAACGAGTTTGATTTT...TACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp AGCGAGATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAAAAATCTGTGAAATGTTaGCCACTGACGACATTCCAC +
Preference number: 5 (lower is better)
Translates to: SEMAVCAVISALRSSCNQKSVKC*PLTTFH
Trigger: GTGGAATGTCGTCAGTGGCAAACATTTCACAGATTT...TTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATCTCGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp AATGTTTCTTTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGTTGAAATACTGGTTGTaGAGCTTCTGCAGCTGCATG +
Preference number: 5 (lower is better)
Translates to: NVSFNSRRRSWGFDFFRRLKYWL*SFCSCM
Trigger: CATGCAGCTGCAGAAGCTCAACAACCAGTATTTCAA...CCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAAAGAAACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp TGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTAAAATCAAACTCGTTTaGCCCCAGCCAGAGTTCGGG +
Preference number: 5 (lower is better)
Translates to: CSNICPSKFMQPTNAIFPKIKLV*PQPEFG
Trigger: CCCGAACTCTGGCTGGGGCAAAACGAGTTTGATTTT...AGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp TGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAAATTGTTGCACATCCTGTaGTTATTCCCCAGCTTCGCC +
Preference number: 5 (lower is better)
Translates to: CPSKFMQPTNAIFPFTRKLLHIL*LFPSFA
Trigger: GGCGAAGCTGGGGAATAACAACAGGATGTGCAACAA...TTTACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536159.2
CDS-3UTR CAA 90 bp TGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAAATGGTTGAAATACTGGTaGTTGAGCTTCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: CPSKFMQPTNAIFPFTRKWLKYW*LSFCSC
Trigger: GCAGCTGCAGAAGCTCAACAACCAGTATTTCAACCA...TTTACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp TCTAAGGGAATGTTTCTTTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTGGTTGAAATACTGGTaGTTGAGCTTCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SKGMFLLIHAEEVGGLISWLKYW*LSFCSC
Trigger: GCAGCTGCAGAAGCTCAACAACCAGTATTTCAACCA...AGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAAAGAAACATTCCCTTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp TATGCCAATTATGTTAAATCCTGCTCTCCGCTTAAGCTCATCATGACCTGTTTTAAGCGAGATGGCAGTTaGTGCAGTAATATCTGCCCT +
Preference number: 5 (lower is better)
Translates to: YANYVKSCSPLKLIMTCFKRDGS*CSNICP
Trigger: AGGGCAGATATTACTGCACAAACTGCCATCTCGCTT...AAAACAGGTCATGATGAGCTTAAGCGGAGAGCAGGATTTAACATAATTGGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367651.4
CDS-3UTR CAA 90 bp TCTGCCCTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTACTGATCCAGAACAGTTaGGCCCACATCTGTTTAATC +
Preference number: 5 (lower is better)
Translates to: SALRSSCNQLMQFFLSLVLIQNS*AHICLI
Trigger: GATTAAACAGATGTGGGCCAAACTGTTCTGGATCAG...TACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAGGGCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp ACAATGATAACAATGAAGCATTATGCCAATTATGTTAAATCCTGCTCTCCGCTTTGGTTGAAATACTGGTaGTTGAGCTTCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: TMITMKHYANYVKSCSPLWLKYW*LSFCSC
Trigger: GCAGCTGCAGAAGCTCAACAACCAGTATTTCAACCA...AAGCGGAGAGCAGGATTTAACATAATTGGCATAATGCTTCATTGTTATCATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367651.4
CDS-3UTR CAA 90 bp AATGTTTCTTTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGATGCAGTTCAGTCATTaGAAACCATCTACAAAATCC +
Preference number: 5 (lower is better)
Translates to: NVSFNSRRRSWGFDFFRRMQFSH*KPSTKS
Trigger: GGATTTTGTAGATGGTTTCAAATGACTGAACTGCAT...CCGGCGAAAGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAAAGAAACATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp CTTCGAAGTTCATGCAACCAACTAATGCAATTTTTCCTTTCACTCGTAAATCTGCTGATCCAGAACAGTTaGGCCCACATCTGTTTAATC +
Preference number: 5 (lower is better)
Translates to: LRSSCNQLMQFFLSLVNLLIQNS*AHICLI
Trigger: GATTAAACAGATGTGGGCCAAACTGTTCTGGATCAG...CAGATTTACGAGTGAAAGGAAAAATTGCATTAGTTGGTTGCATGAACTTCGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp GATGGCAGTTTGTGCAGTAATATCTGCCCTTCGAAGTTCATGCAACCAACTAATAAAGCAGTGACAACTTaGCAGCTTTTGATTAAAGCA +
Preference number: 5 (lower is better)
Translates to: DGSLCSNICPSKFMQPTNKAVTT*QLLIKA
Trigger: TGCTTTAATCAAAAGCTGCAAAGTTGTCACTGCTTT...ATTAGTTGGTTGCATGAACTTCGAAGGGCAGATATTACTGCACAAACTGCCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367651.4
CDS-3UTR CAA 90 bp AAAGCCACCAAAGGGAACAACCACCCCCAAATGACTTCTAGAAAACAAGTTATTATGCAGTTCAGTCATTaGAAACCATCTACAAAATCC +
Preference number: 5 (lower is better)
Translates to: KATKGNNHPQMTSRKQVIMQFSH*KPSTKS
Trigger: GGATTTTGTAGATGGTTTCAAATGACTGAACTGCAT...AATAACTTGTTTTCTAGAAGTCATTTGGGGGTGGTTGTTCCCTTTGGTGGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367651.4
CDS-3UTR CAA 90 bp TCTAAGGGAATGTTTCTTTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTACAACTTTGCAGCTTTaGATTAAAGCACACCAAGAG +
Preference number: 5 (lower is better)
Translates to: SKGMFLLIHAEEVGGLISTTLQL*IKAHQE
Trigger: CTCTTGGTGTGCTTTAATCAAAAGCTGCAAAGTTGT...AGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAAAGAAACATTCCCTTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367651.4
CDS-3UTR CAA 90 bp TCTAAGGGAATGTTTCTTTTAATTCACGCCGAAGAAGTTGGGGGTTTGATTTCTATGCAGTTCAGTCATTaGAAACCATCTACAAAATCC +
Preference number: 5 (lower is better)
Translates to: SKGMFLLIHAEEVGGLISMQFSH*KPSTKS
Trigger: GGATTTTGTAGATGGTTTCAAATGACTGAACTGCAT...AGAAATCAAACCCCCAACTTCTTCGGCGTGAATTAAAAGAAACATTCCCTTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp ATGCAGTTCAGTCATTTGAAACCATCTACAAAATCCACAAGATTAAGCAGTTTGAAATCTGTGAAATGTTaGCCACTGACGACATTCCAC +
Preference number: 5 (lower is better)
Translates to: MQFSHLKPSTKSTRLSSLKSVKC*PLTTFH
Trigger: GTGGAATGTCGTCAGTGGCAAACATTTCACAGATTT...CAAACTGCTTAATCTTGTGGATTTTGTAGATGGTTTCAAATGACTGAACTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS-3UTR CAA 90 bp ATGCAGTTCAGTCATTTGAAACCATCTACAAAATCCACAAGATTAAGCAGTTTGCCTGTAATTTATCCTTaGGAATGCTTACTCTCATCA +
Preference number: 5 (lower is better)
Translates to: MQFSHLKPSTKSTRLSSLPVIYP*ECLLSS
Trigger: TGATGAGAGTAAGCATTCCAAAGGATAAATTACAGG...CAAACTGCTTAATCTTGTGGATTTTGTAGATGGTTTCAAATGACTGAACTGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367651.4
CDS GCA 72 bp GGGTGCTGCTGCCGCCCGAGCCGCCGGGGGTGCTGCTaGCGCCGCTGTGCTTGGGGTTGCAATCTCGGAAGT +
Preference number: 6 (lower is better)
Translates to: GCCCRPSRRGCC*RRCAWGCNLGS
Trigger: ACTTCCGAGATTGCAACCCCAAGCACAGCGGCGGCAGCAGCACCCCCGGCGGCTCGGGCGGCAGCAGCACCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS CAA 72 bp CCCTGGCTGGCCACCGGGGGACCCATGAACTGGGAGTaGTTAAACCTGGCCGCGGGGGCCAGCGCGCTCGGG +
Preference number: 6 (lower is better)
Translates to: PWLATGGPMNWE*LNLAAGASALG
Trigger: CCCGAGCGCGCTGGCCCCCGCGGCCAGGTTTAACAACTCCCAGTTCATGGGTCCCCCGGTGGCCAGCCAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS TCA 72 bp GCCCTCCGTTCACAGTCCCCGGCCCCATCGCATGCCTaGTGCCGCTCGTGGCATTCATGTTGCCCGCGCCGT +
Preference number: 6 (lower is better)
Translates to: ALRSQSPAPSHA*CRSWHSCCPRR
Trigger: ACGGCGCGGGCAACATGAATGCCACGAGCGGCATCAGGCATGCGATGGGGCCGGGGACTGTGAACGGAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS GCA 72 bp GGGTGCCCTCCGTTCACAGTCCCCGGCCCCATCGCATaGCTGATGCCGCTCGTGGCATTCATGTTGCCCGCG +
Preference number: 6 (lower is better)
Translates to: GCPPFTVPGPIA*LMPLVAFMLPA
Trigger: CGCGGGCAACATGAATGCCACGAGCGGCATCAGGCATGCGATGGGGCCGGGGACTGTGAACGGAGGGCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS CCA 72 bp TCTATGACATTGGGCGGCAGCATTGCAGCGGGGACGTaGGCCACGGAGGCGGGCATGTTGCCGCTGCCGCTG +
Preference number: 6 (lower is better)
Translates to: SMTLGGSIAAGT*ATEAGMLPLPL
Trigger: CAGCGGCAGCGGCAACATGCCCGCCTCCGTGGCCCACGTCCCCGCTGCAATGCTGCCGCCCAATGTCATAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS GCA 72 bp CCGGCTCAGCAGCACATAGAGGGGACCTTCCTGGCGTaGAAAGCGCTTCGCTGTCGCGATGTCGGCGCCGAG +
Preference number: 6 (lower is better)
Translates to: PAQQHIEGTFLA*KALRCRDVGAE
Trigger: CTCGGCGCCGACATCGCGACAGCGAAGCGCTTTGCACGCCAGGAAGGTCCCCTCTATGTGCTGCTGAGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367651.4
ENST00000618718.1
CDS CCA 72 bp GTCGCGATGTCGGCGCCGAGGTCTCGCAGCGGCCGCTaGGGCAGATTCGGAGCCGTTCCCTTTTATTTCCCC +
Preference number: 6 (lower is better)
Translates to: VAMSAPRSRSGR*GRFGAVPFYFP
Trigger: GGGGAAATAAAAGGGAACGGCTCCGAATCTGCCCCAGCGGCCGCTGCGAGACCTCGGCGCCGACATCGCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367651.4
ENST00000618718.1
CDS CAA 72 bp CCGCCGGGGGTGCTGCTGCCGCCGCTGTGCTTGGGGTaGCAATCTCGGAAGTGCTGGTTTGTCCCGTTCATC +
Preference number: 6 (lower is better)
Translates to: PPGVLLPPLCLG*QSRKCWFVPFI
Trigger: GATGAACGGGACAAACCAGCACTTCCGAGATTGCAACCCCAAGCACAGCGGCGGCAGCAGCACCCCCGGCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS GCA 72 bp CGCCGGGGGTGCTGCTGCCGCCGCTGTGCTTGGGGTTaGAATCTCGGAAGTGCTGGTTTGTCCCGTTCATCT +
Preference number: 6 (lower is better)
Translates to: RRGCCCRRCAWG*NLGSAGLSRSS
Trigger: AGATGAACGGGACAAACCAGCACTTCCGAGATTGCAACCCCAAGCACAGCGGCGGCAGCAGCACCCCCGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS CAA 72 bp GCAGATTCGGAGCCGTTCCCTTTTATTTCCCCTCCGTaGCCCTCACAGCTCGGCAGGACCGCCCGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: ADSEPFPFISPP*PSQLGRTARQL
Trigger: CAGCTGCCGGGCGGTCCTGCCGAGCTGTGAGGGCAACGGAGGGGAAATAAAAGGGAACGGCTCCGAATCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367651.4
CDS GCA 72 bp TGCCATTTCCAGTCCACTCATAACACAGCCGGACGCTaGACAAACAGCCCCTTCCCCTGCGATCGGGCGGGG +
Preference number: 6 (lower is better)
Translates to: CHFQSTHNTAGR*TNSPFPCDRAG
Trigger: CCCCGCCCGATCGCAGGGGAAGGGGCTGTTTGTGCAGCGTCCGGCTGTGTTATGAGTGGACTGGAAATGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537332.2
CDS CCA 72 bp CCGCCGCTGTGCTTGGGGTTGCAATCTCGGAAGTGCTaGTTTGTCCCGTTCATCTGGTGGCCTGCAGCAGGG +
Preference number: 6 (lower is better)
Translates to: PPLCLGLQSRKC*FVPFIWWPAAG
Trigger: CCCTGCTGCAGGCCACCAGATGAACGGGACAAACCAGCACTTCCGAGATTGCAACCCCAAGCACAGCGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS CAA 90 bp TGCTGCCGCCGCTGTGCTTGGGGTTGCAATCTCGGAAGTGCTGGTTaGTCCCGTTCATCTGGTGGCCTGCAGCAGGGTGCAAATCCGGCA +
Preference number: 6 (lower is better)
Translates to: CCRRCAWGCNLGSAG*SRSSGGLQQGANPA
Trigger: TGCCGGATTTGCACCCTGCTGCAGGCCACCAGATGAACGGGACAAACCAGCACTTCCGAGATTGCAACCCCAAGCACAGCGGCGGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS GCA 72 bp CTGCCGCCGCTGTGCTTGGGGTTGCAATCTCGGAAGTaGTGGTTTGTCCCGTTCATCTGGTGGCCTGCAGCA +
Preference number: 6 (lower is better)
Translates to: LPPLCLGLQSRK*WFVPFIWWPAA
Trigger: TGCTGCAGGCCACCAGATGAACGGGACAAACCAGCACTTCCGAGATTGCAACCCCAAGCACAGCGGCGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS GCA 72 bp GTCTGCCATTTCCAGTCCTTCCGTTTTTGCGATTTCTaGTCCGAAGACCGAGGGCGGGCTCGTCGCGTCCAG +
Preference number: 6 (lower is better)
Translates to: VCHFQSFRFCDF*SEDRGRARRVQ
Trigger: CTGGACGCGACGAGCCCGCCCTCGGTCTTCGGAGCAGAAATCGCAAAAACGGAAGGACTGGAAATGGCAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367651.4
ENST00000618718.1
CDS CCA 72 bp TGGTGCAGCCCATTGGTGCCGTCGGGGAAGCGCCCGTaGTTCATGGCCATCATATGGTCTGCCATTTCCAGT +
Preference number: 6 (lower is better)
Translates to: WCSPLVPSGKRP*FMAIIWSAISS
Trigger: ACTGGAAATGGCAGACCATATGATGGCCATGAACCACGGGCGCTTCCCCGACGGCACCAATGGGCTGCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS CCA 72 bp GCCCATTGGTGCCGTCGGGGAAGCGCCCGTGGTTCATaGCCATCATATGGTCTGCCATTTCCAGTCCACTCA +
Preference number: 6 (lower is better)
Translates to: AHWCRRGSARGS*PSYGLPFPVHS
Trigger: TGAGTGGACTGGAAATGGCAGACCATATGATGGCCATGAACCACGGGCGCTTCCCCGACGGCACCAATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537332.2
CDS CCA 72 bp GCCCATTGGTGCCGTCGGGGAAGCGCCCGTGGTTCATaGCCATCATATGGTCTGCCATTTCCAGTCTTCAGG +
Preference number: 6 (lower is better)
Translates to: AHWCRRGSARGS*PSYGLPFPVFR
Trigger: CCTGAAGACTGGAAATGGCAGACCATATGATGGCCATGAACCACGGGCGCTTCCCCGACGGCACCAATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536159.2
CDS CAA 72 bp CGCTGTGCTTGGGGTTGCAATCTCGGAAGTGCTGGTTaGTCCCGTTCATCTGGTGGCCTGCAGCAGGGTGCA +
Preference number: 6 (lower is better)
Translates to: RCAWGCNLGSAG*SRSSGGLQQGA
Trigger: TGCACCCTGCTGCAGGCCACCAGATGAACGGGACAAACCAGCACTTCCGAGATTGCAACCCCAAGCACAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS CAA 90 bp AAGGACATAAGAACTTCCTCGTCGATGAAATCAGTGTCTATGACATaGGGCGGCAGCATTGCAGCGGGGACGTGGGCCACGGAGGCGGGC +
Preference number: 6 (lower is better)
Translates to: KDIRTSSSMKSVSMT*GGSIAAGTWATEAG
Trigger: GCCCGCCTCCGTGGCCCACGTCCCCGCTGCAATGCTGCCGCCCAATGTCATAGACACTGATTTCATCGACGAGGAAGTTCTTATGTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
CDS GCA 72 bp GGGGAAGCGCCCGTGGTTCATGGCCATCATATGGTCTaGCATTTCCAGTCCACTCATAACACAGCCGGACGC +
Preference number: 6 (lower is better)
Translates to: GEAPVVHGHHMV*HFQSTHNTAGR
Trigger: GCGTCCGGCTGTGTTATGAGTGGACTGGAAATGGCAGACCATATGATGGCCATGAACCACGGGCGCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537332.2
CDS CCA 72 bp CCGTCGGGGAAGCGCCCGTGGTTCATGGCCATCATATaGTCTGCCATTTCCAGTCCACTCATAACACAGCCG +
Preference number: 6 (lower is better)
Translates to: PSGKRPWFMAII*SAISSPLITQP
Trigger: CGGCTGTGTTATGAGTGGACTGGAAATGGCAGACCATATGATGGCCATGAACCACGGGCGCTTCCCCGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537332.2
CDS GCA 72 bp TCGGAAGTGCTGGTTTGTCCCGTTCATCTGGTGGCCTaGAGCAGGGTGCAAATCCGGCATGTAGTGGTTGTG +
Preference number: 6 (lower is better)
Translates to: SEVLVCPVHLVA*SRVQIRHVVVV
Trigger: CACAACCACTACATGCCGGATTTGCACCCTGCTGCAGGCCACCAGATGAACGGGACAAACCAGCACTTCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS CCA 72 bp CCGTCGGGGAAGCGCCCGTGGTTCATGGCCATCATATaGTCTGCCATTTCCAGTCCTTCCGTTTTTGCGATT +
Preference number: 6 (lower is better)
Translates to: PSGKRPWFMAII*SAISSPSVFAI
Trigger: AATCGCAAAAACGGAAGGACTGGAAATGGCAGACCATATGATGGCCATGAACCACGGGCGCTTCCCCGACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367651.4
ENST00000618718.1
CDS CCA 72 bp GTGTCTATGACATTGGGGTTGCAATCTCGGAAGTGCTaGTTTGTCCCGTTCATCTGGTGGCCTGCAGCAGGG +
Preference number: 6 (lower is better)
Translates to: VSMTLGLQSRKC*FVPFIWWPAAG
Trigger: CCCTGCTGCAGGCCACCAGATGAACGGGACAAACCAGCACTTCCGAGATTGCAACCCCAATGTCATAGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618718.1
CDS CAA 90 bp GGGCTGCTGTTTGCACACGAAGTCCGTCATAAAATCAAACTCGTTTaGCCCCAGCCAGAGTTCGGGCAGCTCCTTGATGCGGTCCAAACC +
Preference number: 6 (lower is better)
Translates to: GLLFAHEVRHKIKLV*PQPEFGQLLDAVQT
Trigger: GGTTTGGACCGCATCAAGGAGCTGCCCGAACTCTGGCTGGGGCAAAACGAGTTTGATTTTATGACGGACTTCGTGTGCAAACAGCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS GCA 72 bp GGGGAAGCGCCCGTGGTTCATGGCCATCATATGGTCTaGCATTTCCAGTCCTTCCGTTTTTGCGATTTCTGC +
Preference number: 6 (lower is better)
Translates to: GEAPVVHGHHMV*HFQSFRFCDFC
Trigger: GCAGAAATCGCAAAAACGGAAGGACTGGAAATGGCAGACCATATGATGGCCATGAACCACGGGCGCTTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367651.4
ENST00000618718.1
CDS GCA 72 bp GGGGAAGCGCCCGTGGTTCATGGCCATCATATGGTCTaGCATTTCCAGTCTTCAGGCATTAAATCAGCCCTC +
Preference number: 6 (lower is better)
Translates to: GEAPVVHGHHMV*HFQSSGIKSAL
Trigger: GAGGGCTGATTTAATGCCTGAAGACTGGAAATGGCAGACCATATGATGGCCATGAACCACGGGCGCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536159.2
CDS CCA 72 bp CCGTCGGGGAAGCGCCCGTGGTTCATGGCCATCATATaGTCTGCCATTTCCAGTCTTCAGGCATTAAATCAG +
Preference number: 6 (lower is better)
Translates to: PSGKRPWFMAII*SAISSLQALNQ
Trigger: CTGATTTAATGCCTGAAGACTGGAAATGGCAGACCATATGATGGCCATGAACCACGGGCGCTTCCCCGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536159.2
CDS CAA 90 bp TCAGGCATTAAATCAGCCCTCCTCATCCTGTTGTTGCACATCCTGTaGTTATTCCCCAGCTTCGCCTCACGCTCTTCCTCCGGGCAAACC +
Preference number: 6 (lower is better)
Translates to: SGIKSALLILLLHIL*LFPSFASRSSSGQT
Trigger: GGTTTGCCCGGAGGAAGAGCGTGAGGCGAAGCTGGGGAATAACAACAGGATGTGCAACAACAGGATGAGGAGGGCTGATTTAATGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536159.2
CDS GCA 72 bp TCAGTGTCTATGACATTGGGGTTGCAATCTCGGAAGTaGTGGTTTGTCCCGTTCATCTGGTGGCCTGCAGCA +
Preference number: 6 (lower is better)
Translates to: SVSMTLGLQSRK*WFVPFIWWPAA
Trigger: TGCTGCAGGCCACCAGATGAACGGGACAAACCAGCACTTCCGAGATTGCAACCCCAATGTCATAGACACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618718.1
CDS CAA 72 bp AAATCAGCCCTCCTCATCCTGTTGTTGCACATCCTGTaGTTATTCCCCAGCTTCGCCTCACGCTCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: KSALLILLLHIL*LFPSFASRSSS
Trigger: GGAGGAAGAGCGTGAGGCGAAGCTGGGGAATAACAACAGGATGTGCAACAACAGGATGAGGAGGGCTGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536159.2
CDS CAA 72 bp TTTGCACACGAAGTCCGTCATAAAATCAAACTCGTTTaGCCCCAGCCAGAGTTCGGGCAGCTCCTTGATGCG +
Preference number: 6 (lower is better)
Translates to: FAHEVRHKIKLV*PQPEFGQLLDA
Trigger: CGCATCAAGGAGCTGCCCGAACTCTGGCTGGGGCAAAACGAGTTTGATTTTATGACGGACTTCGTGTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS GCA 72 bp GGGTTTCGATCGAGTCAACAGCTCACTCTGCTGGGCTaGTGTTTGCACACGAAGTCCGTCATAAAATCAAAC +
Preference number: 6 (lower is better)
Translates to: GFRSSQQLTLLG*CLHTKSVIKSN
Trigger: GTTTGATTTTATGACGGACTTCGTGTGCAAACAGCAGCCCAGCAGAGTGAGCTGTTGACTCGATCGAAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367651.4
ENST00000536159.2
ENST00000537332.2
ENST00000618718.1
CDS GCA 72 bp CTTCAGGCATTAAATCAGCCCTCCTCATCCTGTTGTTaGACATCCTGTTGTTATTCCCCAGCTTCGCCTCAC +
Preference number: 6 (lower is better)
Translates to: LQALNQPSSSCC*TSCCYSPASPH
Trigger: GTGAGGCGAAGCTGGGGAATAACAACAGGATGTGCAACAACAGGATGAGGAGGGCTGATTTAATGCCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536159.2
CDS CAA 72 bp TCTTCAGGCATTAAATCAGCCCTCCTCATCCTGTTGTaGCACATCCTGTTGTTATTCCCCAGCTTCGCCTCA +
Preference number: 6 (lower is better)
Translates to: SSGIKSALLILL*HILLLFPSFAS
Trigger: TGAGGCGAAGCTGGGGAATAACAACAGGATGTGCAACAACAGGATGAGGAGGGCTGATTTAATGCCTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536159.2