Pregenerated sensors for CITED1 (Homo sapiens)
Ensembl gene IDs: ENSG00000125931Ensembl transcript IDs: ENST00000246139.9, ENST00000373619.7, ENST00000417400.1, ENST00000427412.5, ENST00000429794.1, ENST00000431381.5, ENST00000445983.5, ENST00000450875.5, ENST00000453707.6, ENST00000454225.1, ENST00000651998.1
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTGGGAAAAGCCCGCACCGCGCCGCGCCGCCGCTGCACCGCACAGTaGCGCGCCAAGCAGCCCCTGACCGAGCTGGTGCCCGCCCGCCCG | + |
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Preference number: 5 (lower is better) Translates to: LGKARTAPRRRCTAQ*RAKQPLTELVPARP Trigger: CGGGCGGGCGGGCACCAGCTCGGTCAGGGGCTGCTTGGCGCGGCACTGTGCGGTGCAGCGGCGGCGCGGCGCGGTGCGGGCTTTTCCCAG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000246139.9 ENST00000454225.1 |
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| CDS GCA 90 bp | CGCGCTCCCTTCCCGGCGCTGGGGACCCGGCTCTCAAGCCCCCATTaGCGCCCGGAGAGCCCTGACGCACACGCACACGGCAGCAGACTG | + |
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Preference number: 5 (lower is better) Translates to: RAPFPALGTRLSSPH*RPESPDAHAHGSRL Trigger: CAGTCTGCTGCCGTGTGCGTGTGCGTCAGGGCTCTCCGGGCGGCAATGGGGGCTTGAGAGCCGGGTCCCCAGCGCCGGGAAGGGAGCGCG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000246139.9 ENST00000454225.1 |
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| CDS CCA 90 bp | CGTTGTTTGCGGACAGCTCGGCTGCCCTCCTCGCCGCATCCCAGATaGAGCCGCGGAACCGGGGGCGGCCGGGAGCATCCCTTGCACGGC | + |
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Preference number: 5 (lower is better) Translates to: RCLRTARLPSSPHPR*SRGTGGGREHPLHG Trigger: GCCGTGCAAGGGATGCTCCCGGCCGCCCCCGGTTCCGCGGCTCCATCTGGGATGCGGCGAGGAGGGCAGCCGAGCTGTCCGCAAACAACG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427412.5 |
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| CDS GCA 90 bp | CACCTGAAAACTCTGAGAAGCCGCCTGCCGGAGGGCCCGCGCGGGTaGTGTGCCGTCCGCTGCTCTCTTCCTCCTCACCGAGAACTGCCC | + |
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Preference number: 5 (lower is better) Translates to: HLKTLRSRLPEGPRG*CAVRCSLPPHRELP Trigger: GGGCAGTTCTCGGTGAGGAGGAAGAGAGCAGCGGACGGCACAGCACCCGCGCGGGCCCTCCGGCAGGCGGCTTCTCAGAGTTTTCAGGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453707.6 |
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| CDS TCA 90 bp | GGTCCTGCCTCCCCGGGTTGGCCTGGAGTGGCAGCAGCCATCCCCTaGTACTGGCTATTAAGTTTCTGCAGGTGCATACTAGCCAGCAAG | + |
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Preference number: 5 (lower is better) Translates to: GPASPGWPGVAAAIP*YWLLSFCRCILASK Trigger: CTTGCTGGCTAGTATGCACCTGCAGAAACTTAATAGCCAGTATCAGGGGATGGCTGCTGCCACTCCAGGCCAACCCGGGGAGGCAGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000246139.9 ENST00000373619.7 ENST00000417400.1 ENST00000431381.5 ENST00000445983.5 ENST00000453707.6 ENST00000651998.1 |
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| CDS TCA 90 bp | GCTTGGCTTGGACGCGCTCTAACCAGACCAGTCAGTTTCGCCACCTaGAAACTAAAGGCCCGTTGTTTGCGGACAGCTCGGCTGCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: AWLGRALTRPVSFAT*KLKARCLRTARLPS Trigger: GGAGGGCAGCCGAGCTGTCCGCAAACAACGGGCCTTTAGTTTTCAGGTGGCGAAACTGACTGGTCTGGTTAGAGCGCGTCCAAGCCAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427412.5 |
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| CDS CCA 90 bp | CAACCCCAGTTCCACCACCAGCGACATCAGCACTTCCTCATCCACTaGGTCCGAATCGATGATAGCAGGGCTCTGGGCACCAGCAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: QPQFHHQRHQHFLIH*VRIDDSRALGTSRR Trigger: CCTTCTGCTGGTGCCCAGAGCCCTGCTATCATCGATTCGGACCCAGTGGATGAGGAAGTGCTGATGTCGCTGGTGGTGGAACTGGGGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000246139.9 ENST00000373619.7 ENST00000431381.5 ENST00000445983.5 ENST00000453707.6 ENST00000651998.1 |
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| CDS TCA 90 bp | AGATCCCGAGGAACTAGTGGGAGCCCCACTGGCCTTGGTTCCATTTaGGGCTACCCCAGGGTAGTGCAGAATGGCCACTGCTTTGCGATC | + |
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Preference number: 5 (lower is better) Translates to: RSRGTSGSPTGLGSI*GYPRVVQNGHCFAI Trigger: GATCGCAAAGCAGTGGCCATTCTGCACTACCCTGGGGTAGCCTCAAATGGAACCAAGGCCAGTGGGGCTCCCACTAGTTCCTCGGGATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000246139.9 ENST00000373619.7 ENST00000417400.1 ENST00000427412.5 ENST00000431381.5 ENST00000445983.5 ENST00000450875.5 ENST00000453707.6 ENST00000651998.1 |
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| CDS CCA 90 bp | CCTTGGCAGAAGTTGGATAAATTGGCGGGAAGTGATGCTGCCAGCTaGAGCTGTTGTGCCAAGGTCACAGCGCTAGAAAGTGGCGGAGCC | + |
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Preference number: 5 (lower is better) Translates to: PWQKLDKLAGSDAAS*SCCAKVTALESGGA Trigger: GGCTCCGCCACTTTCTAGCGCTGTGACCTTGGCACAACAGCTCCAGCTGGCAGCATCACTTCCCGCCAATTTATCCAACTTCTGCCAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000417400.1 ENST00000445983.5 ENST00000651998.1 |
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| CDS CCA 90 bp | GGTAGTGCAGAATGGCCACTGCTTTGCGATCTTTCACCGCAAGGTTaGAGTAGGCCACGGAGCTCATCTCTTGGTTGGCATCCTCCTTCG | + |
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Preference number: 5 (lower is better) Translates to: GSAEWPLLCDLSPQG*SRPRSSSLGWHPPS Trigger: CGAAGGAGGATGCCAACCAAGAGATGAGCTCCGTGGCCTACTCCAACCTTGCGGTGAAAGATCGCAAAGCAGTGGCCATTCTGCACTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000246139.9 ENST00000373619.7 ENST00000417400.1 ENST00000427412.5 ENST00000429794.1 ENST00000431381.5 ENST00000445983.5 ENST00000450875.5 ENST00000453707.6 ENST00000651998.1 |
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| CDS TCA 90 bp | TCATCTCTTGGTTGGCATCCTCCTTCGCAGGTGAGGTGCCACCCTTaGCATCAAGTGCAGGCCTCGACGTTGTTGGCATTTCAGAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: SSLGWHPPSQVRCHP*HQVQASTLLAFQSL Trigger: AAGGCTCTGAAATGCCAACAACGTCGAGGCCTGCACTTGATGTCAAGGGTGGCACCTCACCTGCGAAGGAGGATGCCAACCAAGAGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000246139.9 ENST00000373619.7 ENST00000417400.1 ENST00000427412.5 ENST00000431381.5 ENST00000445983.5 ENST00000450875.5 ENST00000453707.6 ENST00000454225.1 ENST00000651998.1 |
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| CDS GCA 90 bp | TTCCATTTGAGGCTACCCCAGGGTAGTGCAGAATGGCCACTGCTTTaGGATCTTTCACCGCAAGGTTGGAGTAGGCCACGGAGCTCATCT | + |
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Preference number: 5 (lower is better) Translates to: FHLRLPQGSAEWPLL*DLSPQGWSRPRSSS Trigger: AGATGAGCTCCGTGGCCTACTCCAACCTTGCGGTGAAAGATCGCAAAGCAGTGGCCATTCTGCACTACCCTGGGGTAGCCTCAAATGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000246139.9 ENST00000373619.7 ENST00000417400.1 ENST00000427412.5 ENST00000429794.1 ENST00000431381.5 ENST00000445983.5 ENST00000450875.5 ENST00000453707.6 ENST00000651998.1 |
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| CDS CCA 90 bp | GTGCAGGCCTCGACGTTGTTGGCATTTCAGAGCCTTGGCAGAAGTTaGATAAATTGGCGGGAAGTGATGCTGCCAGCTGGAGCTGTTGTG | + |
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Preference number: 5 (lower is better) Translates to: VQASTLLAFQSLGRS*INWREVMLPAGAVV Trigger: CACAACAGCTCCAGCTGGCAGCATCACTTCCCGCCAATTTATCCAACTTCTGCCAAGGCTCTGAAATGCCAACAACGTCGAGGCCTGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000246139.9 ENST00000373619.7 ENST00000417400.1 ENST00000427412.5 ENST00000431381.5 ENST00000445983.5 ENST00000450875.5 ENST00000453707.6 ENST00000454225.1 ENST00000651998.1 |
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| CDS CCA 90 bp | TTGACATCAAGTGCAGGCCTCGACGTTGTTGGCATTTCAGAGCCTTaGCAGAAGTTGGATAAATTGGCGGGAAGTGATGCTGCCAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: LTSSAGLDVVGISEP*QKLDKLAGSDAASW Trigger: CCAGCTGGCAGCATCACTTCCCGCCAATTTATCCAACTTCTGCCAAGGCTCTGAAATGCCAACAACGTCGAGGCCTGCACTTGATGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000246139.9 ENST00000373619.7 ENST00000417400.1 ENST00000427412.5 ENST00000431381.5 ENST00000445983.5 ENST00000450875.5 ENST00000453707.6 ENST00000454225.1 ENST00000651998.1 |
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| CDS CCA 90 bp | TCGACGTTGTTGGCATTTCAGAGCCTTGGCAGAAGTTGGATAAATTaGCGGGAAGTGATGCTGCCAGCTGGAGCTGTTGTGCCAAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: STLLAFQSLGRSWIN*REVMLPAGAVVPRS Trigger: TGACCTTGGCACAACAGCTCCAGCTGGCAGCATCACTTCCCGCCAATTTATCCAACTTCTGCCAAGGCTCTGAAATGCCAACAACGTCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000417400.1 ENST00000445983.5 ENST00000651998.1 |
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| CDS CCA 90 bp | TCGACGTTGTTGGCATTTCAGAGCCTTGGCAGAAGTTGGATAAATTaGCGGGAAGTGATGCTGCCAGCTGGAGCTGTTGTGCGGATGGTT | + |
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Preference number: 5 (lower is better) Translates to: STLLAFQSLGRSWIN*REVMLPAGAVVRMV Trigger: AACCATCCGCACAACAGCTCCAGCTGGCAGCATCACTTCCCGCCAATTTATCCAACTTCTGCCAAGGCTCTGAAATGCCAACAACGTCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000427412.5 ENST00000431381.5 ENST00000450875.5 ENST00000453707.6 ENST00000454225.1 |
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| CDS GCA 72 bp | CGCCTGGGAAAAGCCCGCACCGCGCCGCGCCGCCGCTaGACCGCACAGTGCCGCGCCAAGCAGCCCCTGACC | + |
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Preference number: 6 (lower is better) Translates to: RLGKARTAPRRR*TAQCRAKQPLT Trigger: GGTCAGGGGCTGCTTGGCGCGGCACTGTGCGGTGCAGCGGCGGCGCGGCGCGGTGCGGGCTTTTCCCAGGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000246139.9 ENST00000454225.1 |
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| CDS CCA 72 bp | CGGACAGCTCGGCTGCCCTCCTCGCCGCATCCCAGATaGAGCCGCGGAACCGGGGGCGGCCGGGAGCATCCC | + |
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Preference number: 6 (lower is better) Translates to: RTARLPSSPHPR*SRGTGGGREHP Trigger: GGGATGCTCCCGGCCGCCCCCGGTTCCGCGGCTCCATCTGGGATGCGGCGAGGAGGGCAGCCGAGCTGTCCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427412.5 |
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| CDS GCA 72 bp | TTCCCGGCGCTGGGGACCCGGCTCTCAAGCCCCCATTaGCGCCCGGAGAGCCCTGACGCACACGCACACGGC | + |
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Preference number: 6 (lower is better) Translates to: FPALGTRLSSPH*RPESPDAHAHG Trigger: GCCGTGTGCGTGTGCGTCAGGGCTCTCCGGGCGGCAATGGGGGCTTGAGAGCCGGGTCCCCAGCGCCGGGAA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000246139.9 ENST00000454225.1 |
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| CDS TCA 72 bp | CCGGCTCTCAAGCCCCCATTGCCGCCCGGAGAGCCCTaGCGCACACGCACACGGCAGCAGACTGGCCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: PALKPPLPPGEP*RTRTRQQTGLG Trigger: GCCGAGGCCAGTCTGCTGCCGTGTGCGTGTGCGTCAGGGCTCTCCGGGCGGCAATGGGGGCTTGAGAGCCGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000246139.9 ENST00000454225.1 |
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| CDS GCA 72 bp | ACTCTGAGAAGCCGCCTGCCGGAGGGCCCGCGCGGGTaGTGTGCCGTCCGCTGCTCTCTTCCTCCTCACCGA | + |
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Preference number: 6 (lower is better) Translates to: TLRSRLPEGPRG*CAVRCSLPPHR Trigger: TCGGTGAGGAGGAAGAGAGCAGCGGACGGCACAGCACCCGCGCGGGCCCTCCGGCAGGCGGCTTCTCAGAGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453707.6 |
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| CDS GCA 72 bp | GTGCCGTCCGCTGCTCTCTTCCTCCTCACCGAGAACTaGCCCTCGCCGGCGGACTACAAGAGGGCAGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: VPSAALFLLTEN*PSPADYKRAAG Trigger: CCCGGCTGCCCTCTTGTAGTCCGCCGGCGAGGGGCAGTTCTCGGTGAGGAGGAAGAGAGCAGCGGACGGCAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373619.7 ENST00000453707.6 |
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| CDS GCA 72 bp | CCGGGCAGAGCGAGCTTCCTCTCGGCAGCTCAGCGGTaGCCCTTCTGCAGCTTTGCCGCCGGGCACATTTTT | + |
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Preference number: 6 (lower is better) Translates to: PGRASFLSAAQR*PFCSFAAGHIF Trigger: AAAAATGTGCCCGGCGGCAAAGCTGCAGAAGGGGCACCGCTGAGCTGCCGAGAGGAAGCTCGCTCTGCCCGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373619.7 |
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| CDS CCA 72 bp | CGGAGAGCCCTGACGCACACGCACACGGCAGCAGACTaGCCTCGGCTAGGAATCCCAGGAAGGACAGACCCT | + |
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Preference number: 6 (lower is better) Translates to: RRALTHTHTAAD*PRLGIPGRTDP Trigger: AGGGTCTGTCCTTCCTGGGATTCCTAGCCGAGGCCAGTCTGCTGCCGTGTGCGTGTGCGTCAGGGCTCTCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000246139.9 ENST00000454225.1 |
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| CDS CCA 72 bp | AGCTGGAGCTGTTGTGCTCTGAGAAGCCGCCTGCCCTaGAGAGAGGGAAGCGCGGAGCTCGGTGAGCCGCAA | + |
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Preference number: 6 (lower is better) Translates to: SWSCCALRSRLP*REGSAELGEPQ Trigger: TTGCGGCTCACCGAGCTCCGCGCTTCCCTCTCTCCAGGGCAGGCGGCTTCTCAGAGCACAACAGCTCCAGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246139.9 |
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| CDS TCA 72 bp | AAAGTGGCGGAGCCGGGATTCGCAGCCAGGTCTCTCTaGCTCCAAGTCCGGTGCTCTGCGAAGCAGGGACTC | + |
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Preference number: 6 (lower is better) Translates to: KVAEPGFAARSL*LQVRCSAKQGL Trigger: GAGTCCCTGCTTCGCAGAGCACCGGACTTGGAGTCAGAGAGACCTGGCTGCGAATCCCGGCTCCGCCACTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000431381.5 ENST00000445983.5 ENST00000651998.1 |
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| CDS CCA 72 bp | TTTCGCCACCTGAAAACTCTGAGAAGCCGCCTGCCCTaGAGAGAGGGAAGCGCGGAGCTCGGTGAGCCGCAA | + |
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Preference number: 6 (lower is better) Translates to: FRHLKTLRSRLP*REGSAELGEPQ Trigger: TTGCGGCTCACCGAGCTCCGCGCTTCCCTCTCTCCAGGGCAGGCGGCTTCTCAGAGTTTTCAGGTGGCGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454225.1 |
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| CDS CCA 72 bp | AAGTTGGATAAATTGGCGGGAAGTGATGCTGCCAGCTaGAGCTGTTGTGGGAGGGCCCGCGCGGGTGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: KLDKLAGSDAAS*SCCGRARAGAV Trigger: CACAGCACCCGCGCGGGCCCTCCCACAACAGCTCCAGCTGGCAGCATCACTTCCCGCCAATTTATCCAACTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373619.7 |
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| CDS CCA 72 bp | CTGGAGCTGTTGTGCCAAGGTCACAGCGCTAGAAAGTaGCGGAGCCGGGATTCGCAGCCAGGTCTCTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: LELLCQGHSARK*RSRDSQPGLSD Trigger: GTCAGAGAGACCTGGCTGCGAATCCCGGCTCCGCCACTTTCTAGCGCTGTGACCTTGGCACAACAGCTCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000417400.1 ENST00000445983.5 ENST00000651998.1 |
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| CDS TCA 72 bp | GGAACTAGTGGGAGCCCCACTGGCCTTGGTTCCATTTaGGGCTACCCCAGGGTAGTGCAGAATGGCCACTGC | + |
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Preference number: 6 (lower is better) Translates to: GTSGSPTGLGSI*GYPRVVQNGHC Trigger: GCAGTGGCCATTCTGCACTACCCTGGGGTAGCCTCAAATGGAACCAAGGCCAGTGGGGCTCCCACTAGTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000246139.9 ENST00000373619.7 ENST00000417400.1 ENST00000427412.5 ENST00000431381.5 ENST00000445983.5 ENST00000450875.5 ENST00000453707.6 ENST00000651998.1 |
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| CDS CCA 72 bp | GGGTTTAGTGGGAGGGGTGGTTGTAGGAGAGCCTATTaGAGATCCCGAGGAACTAGTGGGAGCCCCACTGGC | + |
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Preference number: 6 (lower is better) Translates to: GFSGRGGCRRAY*RSRGTSGSPTG Trigger: GCCAGTGGGGCTCCCACTAGTTCCTCGGGATCTCCAATAGGCTCTCCTACAACCACCCCTCCCACTAAACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000246139.9 ENST00000373619.7 ENST00000417400.1 ENST00000427412.5 ENST00000431381.5 ENST00000445983.5 ENST00000450875.5 ENST00000453707.6 ENST00000651998.1 |
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| CDS CCA 72 bp | TCGCCACCTGAAAACCAAGGTCACAGCGCTAGAAAGTaGCGGAGCCGGGATTCGCAGCCAGGTCTCTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: SPPENQGHSARK*RSRDSQPGLSD Trigger: GTCAGAGAGACCTGGCTGCGAATCCCGGCTCCGCCACTTTCTAGCGCTGTGACCTTGGTTTTCAGGTGGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000431381.5 ENST00000450875.5 |
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| CDS CAA 72 bp | ACCAGTCAGTTTCGCCACCTGAAAACTAAAGGCCCGTaGTTTGCGGACAGCTCGGCTGCCCTCCTCGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: TSQFRHLKTKGP*FADSSAALLAA Trigger: TGCGGCGAGGAGGGCAGCCGAGCTGTCCGCAAACAACGGGCCTTTAGTTTTCAGGTGGCGAAACTGACTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427412.5 |
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| CDS CAA 90 bp | TCTAACCAGACCAGTCAGTTTCGCCACCTGAAAACTAAAGGCCCGTaGTTTGCGGACAGCTCGGCTGCCCTCCTCGCCGCATCCCAGATG | + |
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Preference number: 6 (lower is better) Translates to: SNQTSQFRHLKTKGP*FADSSAALLAASQM Trigger: CATCTGGGATGCGGCGAGGAGGGCAGCCGAGCTGTCCGCAAACAACGGGCCTTTAGTTTTCAGGTGGCGAAACTGACTGGTCTGGTTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427412.5 |
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| CDS GCA 72 bp | AGGCTACCCCAGGGTAGTGCAGAATGGCCACTGCTTTaGGATCTTTCACCGCAAGGTTGGAGTAGGCCACGG | + |
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Preference number: 6 (lower is better) Translates to: RLPQGSAEWPLL*DLSPQGWSRPR Trigger: CCGTGGCCTACTCCAACCTTGCGGTGAAAGATCGCAAAGCAGTGGCCATTCTGCACTACCCTGGGGTAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000246139.9 ENST00000373619.7 ENST00000417400.1 ENST00000427412.5 ENST00000429794.1 ENST00000431381.5 ENST00000445983.5 ENST00000450875.5 ENST00000453707.6 ENST00000651998.1 |
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| CDS CCA 72 bp | TTCCACCACCAGCGACATCAGCACTTCCTCATCCACTaGGTCCGAATCGATGATAGCAGGGCTCTGGGCACC | + |
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Preference number: 6 (lower is better) Translates to: FHHQRHQHFLIH*VRIDDSRALGT Trigger: GGTGCCCAGAGCCCTGCTATCATCGATTCGGACCCAGTGGATGAGGAAGTGCTGATGTCGCTGGTGGTGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000246139.9 ENST00000373619.7 ENST00000431381.5 ENST00000445983.5 ENST00000453707.6 ENST00000651998.1 |
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| CDS TCA 72 bp | GGTTGGCATCCTCCTTCGCAGGTGAGGTGCCACCCTTaGCATCAAGTGCAGGCCTCGACGTTGTTGGCATTT | + |
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Preference number: 6 (lower is better) Translates to: GWHPPSQVRCHP*HQVQASTLLAF Trigger: AAATGCCAACAACGTCGAGGCCTGCACTTGATGTCAAGGGTGGCACCTCACCTGCGAAGGAGGATGCCAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000246139.9 ENST00000373619.7 ENST00000417400.1 ENST00000427412.5 ENST00000431381.5 ENST00000445983.5 ENST00000450875.5 ENST00000453707.6 ENST00000454225.1 ENST00000651998.1 |
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| CDS TCA 72 bp | GGACGCGCTCTAACCAGACCAGTCAGTTTCGCCACCTaGAAACTAAAGGCCCGTTGTTTGCGGACAGCTCGG | + |
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Preference number: 6 (lower is better) Translates to: GRALTRPVSFAT*KLKARCLRTAR Trigger: CCGAGCTGTCCGCAAACAACGGGCCTTTAGTTTTCAGGTGGCGAAACTGACTGGTCTGGTTAGAGCGCGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427412.5 |
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| CDS CCA 72 bp | AAGTTGGATAAATTGGCGGGAAGTGATGCTGCCAGCTaGAGCTGTTGTGCTCTGAGAAGCCGCCTGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: KLDKLAGSDAAS*SCCALRSRLPW Trigger: CCAGGGCAGGCGGCTTCTCAGAGCACAACAGCTCCAGCTGGCAGCATCACTTCCCGCCAATTTATCCAACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246139.9 |
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| CDS CAA 72 bp | TGGTTGGCATCCTCCTTCGCAGGTGAGGTGCCACCCTaGACATCAAGTGCAGGCCTCGACGTTGTTGGCATT | + |
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Preference number: 6 (lower is better) Translates to: WLASSFAGEVPP*TSSAGLDVVGI Trigger: AATGCCAACAACGTCGAGGCCTGCACTTGATGTCAAGGGTGGCACCTCACCTGCGAAGGAGGATGCCAACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000246139.9 ENST00000373619.7 ENST00000417400.1 ENST00000427412.5 ENST00000431381.5 ENST00000445983.5 ENST00000450875.5 ENST00000453707.6 ENST00000454225.1 ENST00000651998.1 |
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| CDS CAA 90 bp | CTCATCTCTTGGTTGGCATCCTCCTTCGCAGGTGAGGTGCCACCCTaGACATCAAGTGCAGGCCTCGACGTTGTTGGCATTTCAGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: LISWLASSFAGEVPP*TSSAGLDVVGISEP Trigger: AGGCTCTGAAATGCCAACAACGTCGAGGCCTGCACTTGATGTCAAGGGTGGCACCTCACCTGCGAAGGAGGATGCCAACCAAGAGATGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000246139.9 ENST00000373619.7 ENST00000417400.1 ENST00000427412.5 ENST00000431381.5 ENST00000445983.5 ENST00000450875.5 ENST00000453707.6 ENST00000454225.1 ENST00000651998.1 |
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| CDS TCA 72 bp | TCCCCGGGTTGGCCTGGAGTGGCAGCAGCCATCCCCTaGTACTGGCTATTAAGTTTCTGCAGGTGCATACTA | + |
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Preference number: 6 (lower is better) Translates to: SPGWPGVAAAIP*YWLLSFCRCIL Trigger: TAGTATGCACCTGCAGAAACTTAATAGCCAGTATCAGGGGATGGCTGCTGCCACTCCAGGCCAACCCGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000246139.9 ENST00000373619.7 ENST00000417400.1 ENST00000431381.5 ENST00000445983.5 ENST00000453707.6 ENST00000651998.1 |
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| CDS GCA 72 bp | CTAGATGGAAAGTCCGCAGTGAAGTCAAACTCATTCTaGCCCAGCCACAGCTCCGGAAGCTCATTGGCTCGG | + |
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Preference number: 6 (lower is better) Translates to: LDGKSAVKSNSF*PSHSSGSSLAR Trigger: CCGAGCCAATGAGCTTCCGGAGCTGTGGCTGGGGCAGAATGAGTTTGACTTCACTGCGGACTTTCCATCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000246139.9 ENST00000373619.7 ENST00000429794.1 ENST00000431381.5 ENST00000445983.5 ENST00000453707.6 ENST00000651998.1 |
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| CDS CCA 72 bp | TTCCACCACCAGCGACATCAGCACTTCCTCATCCACTaGGTCCGAATCGATGATAGCAGGGCTCTTGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: FHHQRHQHFLIH*VRIDDSRALGS Trigger: GGAACCAAGAGCCCTGCTATCATCGATTCGGACCCAGTGGATGAGGAAGTGCTGATGTCGCTGGTGGTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429794.1 |
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| CDS CCA 72 bp | GAATGGCCACTGCTTTGCGATCTTTCACCGCAAGGTTaGAGTAGGCCACGGAGCTCATCTCTTGGTTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: EWPLLCDLSPQG*SRPRSSSLGWH Trigger: ATGCCAACCAAGAGATGAGCTCCGTGGCCTACTCCAACCTTGCGGTGAAAGATCGCAAAGCAGTGGCCATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000246139.9 ENST00000373619.7 ENST00000417400.1 ENST00000427412.5 ENST00000429794.1 ENST00000431381.5 ENST00000445983.5 ENST00000450875.5 ENST00000453707.6 ENST00000651998.1 |
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| CDS CCA 72 bp | TGGTTCCATTTGAGGCTACCCCAGGGTAGTGCAGAATaGCCACTGCTTTGCGATCTTTCACCGCAAGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: WFHLRLPQGSAE*PLLCDLSPQGW Trigger: CCAACCTTGCGGTGAAAGATCGCAAAGCAGTGGCCATTCTGCACTACCCTGGGGTAGCCTCAAATGGAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000246139.9 ENST00000373619.7 ENST00000417400.1 ENST00000427412.5 ENST00000429794.1 ENST00000431381.5 ENST00000445983.5 ENST00000450875.5 ENST00000453707.6 ENST00000651998.1 |
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| CDS CAA 90 bp | AGTGCAGGCCTCGACGTTGTTGGCATTTCAGAGCCTTGGCAGAAGTaGGATAAATTGGCGGGAAGTGATGCTGCCAGCTGGAGCTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: SAGLDVVGISEPWQK*DKLAGSDAASWSCC Trigger: ACAACAGCTCCAGCTGGCAGCATCACTTCCCGCCAATTTATCCAACTTCTGCCAAGGCTCTGAAATGCCAACAACGTCGAGGCCTGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000246139.9 ENST00000373619.7 ENST00000417400.1 ENST00000427412.5 ENST00000431381.5 ENST00000445983.5 ENST00000450875.5 ENST00000453707.6 ENST00000454225.1 ENST00000651998.1 |
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| CDS CAA 90 bp | CTCGACGTTGTTGGCATTTCAGAGCCTTGGCAGAAGTTGGATAAATaGGCGGGAAGTGATGCTGCCAGCTGGAGCTGTTGTGCCAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: LDVVGISEPWQKLDK*AGSDAASWSCCAKV Trigger: GACCTTGGCACAACAGCTCCAGCTGGCAGCATCACTTCCCGCCAATTTATCCAACTTCTGCCAAGGCTCTGAAATGCCAACAACGTCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000417400.1 ENST00000445983.5 ENST00000651998.1 |
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| CDS CAA 90 bp | CTCGACGTTGTTGGCATTTCAGAGCCTTGGCAGAAGTTGGATAAATaGGCGGGAAGTGATGCTGCCAGCTGGAGCTGTTGTGCGGATGGT | + |
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Preference number: 6 (lower is better) Translates to: LDVVGISEPWQKLDK*AGSDAASWSCCADG Trigger: ACCATCCGCACAACAGCTCCAGCTGGCAGCATCACTTCCCGCCAATTTATCCAACTTCTGCCAAGGCTCTGAAATGCCAACAACGTCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000427412.5 ENST00000431381.5 ENST00000450875.5 ENST00000453707.6 ENST00000454225.1 |
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| CDS CAA 90 bp | CTCGACGTTGTTGGCATTTCAGAGCCTTGGCAGAAGTTGGATAAATaGGCGGGAAGTGATGCTGCCAGCTGGAGCTGTTGTGCTCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: LDVVGISEPWQKLDK*AGSDAASWSCCALR Trigger: TCTCAGAGCACAACAGCTCCAGCTGGCAGCATCACTTCCCGCCAATTTATCCAACTTCTGCCAAGGCTCTGAAATGCCAACAACGTCGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246139.9 |
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| CDS CCA 72 bp | TTGGCATTTCAGAGCCTTGGCAGAAGTTGGATAAATTaGCGGGAAGTGATGCTGCCAGCTGGAGCTGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: LAFQSLGRSWIN*REVMLPAGAVV Trigger: CACAACAGCTCCAGCTGGCAGCATCACTTCCCGCCAATTTATCCAACTTCTGCCAAGGCTCTGAAATGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000246139.9 ENST00000373619.7 ENST00000417400.1 ENST00000427412.5 ENST00000431381.5 ENST00000445983.5 ENST00000450875.5 ENST00000453707.6 ENST00000454225.1 ENST00000651998.1 |
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| CDS CCA 72 bp | AAGTTGGATAAATTGGCGGGAAGTGATGCTGCCAGCTaGAGCTGTTGTGCCAAGGTCACAGCGCTAGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: KLDKLAGSDAAS*SCCAKVTALES Trigger: ACTTTCTAGCGCTGTGACCTTGGCACAACAGCTCCAGCTGGCAGCATCACTTCCCGCCAATTTATCCAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000417400.1 ENST00000445983.5 ENST00000651998.1 |
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| CDS CCA 72 bp | AAGTTGGATAAATTGGCGGGAAGTGATGCTGCCAGCTaGAGCTGTTGTGCGGATGGTTCCATCTCGATTGCT | + |
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Preference number: 6 (lower is better) Translates to: KLDKLAGSDAAS*SCCADGSISIA Trigger: AGCAATCGAGATGGAACCATCCGCACAACAGCTCCAGCTGGCAGCATCACTTCCCGCCAATTTATCCAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000427412.5 ENST00000431381.5 ENST00000450875.5 ENST00000453707.6 ENST00000454225.1 |
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| CDS CAA 72 bp | GTTGGCATTTCAGAGCCTTGGCAGAAGTTGGATAAATaGGCGGGAAGTGATGCTGCCAGCTGGAGCTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: VGISEPWQKLDK*AGSDAASWSCC Trigger: ACAACAGCTCCAGCTGGCAGCATCACTTCCCGCCAATTTATCCAACTTCTGCCAAGGCTCTGAAATGCCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000246139.9 ENST00000373619.7 ENST00000417400.1 ENST00000427412.5 ENST00000431381.5 ENST00000445983.5 ENST00000450875.5 ENST00000453707.6 ENST00000454225.1 ENST00000651998.1 |
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| CDS GCA 72 bp | CAGCTGGAGCTGTTGTGCGGATGGTTCCATCTCGATTaGTATTTTCTCACTCAGAAGGAGAAATTTAAAAAT | + |
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Preference number: 6 (lower is better) Translates to: QLELLCGWFHLD*YFLTQKEKFKN Trigger: ATTTTTAAATTTCTCCTTCTGAGTGAGAAAATAGCAATCGAGATGGAACCATCCGCACAACAGCTCCAGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000427412.5 ENST00000431381.5 ENST00000450875.5 ENST00000453707.6 ENST00000454225.1 |
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