Pregenerated sensors for CISTR (Homo sapiens)
Ensembl gene IDs: ENSG00000260492Ensembl transcript IDs: ENST00000570015.2, ENST00000626733.1, ENST00000663667.1, ENST00000669269.1
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CTGTCTCTCTCCCTCCACTGGCTCCATCTGCCGTCGCTGAGGTCGTaGCAAGGAGGCAAACAGCAAAACGGCAAACAGCTGGATAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: LSLSLHWLHLPSLRS*QGGKQQNGKQLDSR Trigger: CCTGCTATCCAGCTGTTTGCCGTTTTGCTGTTTGCCTCCTTGTCACGACCTCAGCGACGGCAGATGGAGCCAGTGGAGGGAGAGAGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669269.1 |
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| CDS GCA 90 bp | TGTATTTTACTTGGCTACGTGTGGCGAAGGGCAGCGTGTGTGTTTTaGGCGCGTGTGTGTGTGCGTGCTCGTGTCTGCAGGAGGAGTGGG | + |
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Preference number: 5 (lower is better) Translates to: CILLGYVWRRAACVF*ARVCVRARVCRRSG Trigger: CCCACTCCTCCTGCAGACACGAGCACGCACACACACACGCGCGCAAAACACACACGCTGCCCTTCGCCACACGTAGCCAAGTAAAATACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000570015.2 ENST00000663667.1 ENST00000669269.1 |
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| CDS TCA 90 bp | CTGTCTCTCTCCCTCCACTGGCTCCATCTGCCGTCGCTGAGGTCGTaGCAAGGAGGCAAACAGCAAAACGGCAAACAGCTATCCAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: LSLSLHWLHLPSLRS*QGGKQQNGKQLSSP Trigger: TGGACTGGATAGCTGTTTGCCGTTTTGCTGTTTGCCTCCTTGTCACGACCTCAGCGACGGCAGATGGAGCCAGTGGAGGGAGAGAGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000570015.2 ENST00000626733.1 |
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| CDS TCA 90 bp | CTGTCTCTCTCCCTCCACTGGCTCCATCTGCCGTCGCTGAGGTCGTaGCAAGGAGGCAAACAGCAAAACGGCAAACAGCTTTTTCAGTGT | + |
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Preference number: 5 (lower is better) Translates to: LSLSLHWLHLPSLRS*QGGKQQNGKQLFQC Trigger: ACACTGAAAAAGCTGTTTGCCGTTTTGCTGTTTGCCTCCTTGTCACGACCTCAGCGACGGCAGATGGAGCCAGTGGAGGGAGAGAGACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663667.1 |
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| CDS TCA 90 bp | AACAGCAAAACGGCAAACAGCTGGATAGCAGGGGACTCCGGGTCCTaGAATGTTCACTCTTTGGTAGGTCCTGTGGAAGAGCGCAGGCAA | + |
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Preference number: 5 (lower is better) Translates to: NSKTANSWIAGDSGS*NVHSLVGPVEERRQ Trigger: TTGCCTGCGCTCTTCCACAGGACCTACCAAAGAGTGAACATTTCAGGACCCGGAGTCCCCTGCTATCCAGCTGTTTGCCGTTTTGCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669269.1 |
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| CDS CCA 90 bp | CAGGTGAGCAAACCACAAATGAGGCTGTGGACAGCTTTGCTAGCCTaGAGCAACGAGCTGGATTCAGGAACCAGCATGAAGGGGAATGGA | + |
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Preference number: 5 (lower is better) Translates to: QVSKPQMRLWTALLA*SNELDSGTSMKGNG Trigger: TCCATTCCCCTTCATGCTGGTTCCTGAATCCAGCTCGTTGCTCCAGGCTAGCAAAGCTGTCCACAGCCTCATTTGTGGTTTGCTCACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663667.1 ENST00000669269.1 |
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| CDS CCA 90 bp | AGAACCAAGAAGTCGTGGGTTCTAGTTCTAGCTCCAGTTATCAGCTaGGACCCTAGGGAATGTCACGGAGGAGCGTGGGTGTCATCTGCT | + |
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Preference number: 5 (lower is better) Translates to: RTKKSWVLVLAPVIS*DPRECHGGAWVSSA Trigger: AGCAGATGACACCCACGCTCCTCCGTGACATTCCCTAGGGTCCCAGCTGATAACTGGAGCTAGAACTAGAACCCACGACTTCTTGGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663667.1 ENST00000669269.1 |
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| CDS TCA 90 bp | TTTTTGGATAACCTGATTAGCTGGATAGCAGGGGACTCCGGGTCCTaGAATGTTCACTCTTTGGTAGGTCCTGTGGAAGAGCGCAGGCAA | + |
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Preference number: 5 (lower is better) Translates to: FLDNLISWIAGDSGS*NVHSLVGPVEERRQ Trigger: TTGCCTGCGCTCTTCCACAGGACCTACCAAAGAGTGAACATTTCAGGACCCGGAGTCCCCTGCTATCCAGCTAATCAGGTTATCCAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000626733.1 |
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| CDS GCA 90 bp | ATGGTTTTATTTCAGGAGCTGCAGCTGACACAATGGGAAGACCCCTaGGCAGAGAACCAAGAAGTCGTGGGTTCTAGTTCTAGCTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: MVLFQELQLTQWEDP*AENQEVVGSSSSSS Trigger: ACTGGAGCTAGAACTAGAACCCACGACTTCTTGGTTCTCTGCGCAGGGGTCTTCCCATTGTGTCAGCTGCAGCTCCTGAAATAAAACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000663667.1 ENST00000669269.1 |
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| CDS CCA 90 bp | CCAGTCCATGTCTCACCAGCTGTCTTCATCTTGCCCAAGATCCTCTaGTTCTTTCTTCTCTGCAAATCCCATATGCTTTCCCCAGCACCA | + |
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Preference number: 5 (lower is better) Translates to: PVHVSPAVFILPKIL*FFLLCKSHMLSPAP Trigger: TGGTGCTGGGGAAAGCATATGGGATTTGCAGAGAAGAAAGAACCAGAGGATCTTGGGCAAGATGAAGACAGCTGGTGAGACATGGACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000570015.2 ENST00000626733.1 |
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| CDS GCA 90 bp | CGGCAAACAGCTATCCAGTCCATGTCTCACCAGCTGTCTTCATCTTaGCCAAGATCCTCTGGTTCTTTCTTCTCTGCAAATCCCATATGC | + |
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Preference number: 5 (lower is better) Translates to: RQTAIQSMSHQLSSS*PRSSGSFFSANPIC Trigger: GCATATGGGATTTGCAGAGAAGAAAGAACCAGAGGATCTTGGGCAAGATGAAGACAGCTGGTGAGACATGGACTGGATAGCTGTTTGCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000570015.2 ENST00000626733.1 |
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| CDS GCA 90 bp | ACCCCAGGCTCTTGTCTATCCATCTGTGTGACTGGCATGTGGCTATaGCTGAATGCGTTTGTTCATTTGTGTGTTTCCATGTGGTCATGT | + |
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Preference number: 5 (lower is better) Translates to: TPGSCLSICVTGMWL*LNAFVHLCVSMWSC Trigger: ACATGACCACATGGAAACACACAAATGAACAAACGCATTCAGGCATAGCCACATGCCAGTCACACAGATGGATAGACAAGAGCCTGGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000570015.2 ENST00000663667.1 ENST00000669269.1 |
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| CDS CCA 90 bp | CTTTGTACCCCAGGCTCTTGTCTATCCATCTGTGTGACTGGCATGTaGCTATGCCTGAATGCGTTTGTTCATTTGTGTGTTTCCATGTGG | + |
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Preference number: 5 (lower is better) Translates to: LCTPGSCLSICVTGM*LCLNAFVHLCVSMW Trigger: CCACATGGAAACACACAAATGAACAAACGCATTCAGGCATAGCCACATGCCAGTCACACAGATGGATAGACAAGAGCCTGGGGTACAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000570015.2 ENST00000663667.1 ENST00000669269.1 |
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| CDS CCA 90 bp | CATGTGGCTTTGTACCCCAGGCTCTTGTCTATCCATCTGTGTGACTaGCATGTGGCTATGCCTGAATGCGTTTGTTCATTTGTGTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: HVALYPRLLSIHLCD*HVAMPECVCSFVCF Trigger: GAAACACACAAATGAACAAACGCATTCAGGCATAGCCACATGCCAGTCACACAGATGGATAGACAAGAGCCTGGGGTACAAAGCCACATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000570015.2 ENST00000663667.1 ENST00000669269.1 |
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| CDS GCA 90 bp | TCATTTGTGTGTTTCCATGTGGTCATGTGCGAATGGTATCTCAGTTaGTTTTTGTGTATTTTACTTGGCTACGTGTGGCGAAGGGCAGCG | + |
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Preference number: 5 (lower is better) Translates to: SFVCFHVVMCEWYLS*FLCILLGYVWRRAA Trigger: CGCTGCCCTTCGCCACACGTAGCCAAGTAAAATACACAAAAAGCAACTGAGATACCATTCGCACATGACCACATGGAAACACACAAATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000570015.2 ENST00000663667.1 ENST00000669269.1 |
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| CDS TCA 90 bp | CATGGCAGAGGACAAAGGAGCCAATTATTGAGTGAGTGGATTAATTaGTTAATTGTCCAGAAGCTTCCAGTGCTCCCCAACAATGACATC | + |
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Preference number: 5 (lower is better) Translates to: HGRGQRSQLLSEWIN*LIVQKLPVLPNNDI Trigger: GATGTCATTGTTGGGGAGCACTGGAAGCTTCTGGACAATTAATCAATTAATCCACTCACTCAATAATTGGCTCCTTTGTCCTCTGCCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669269.1 |
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| CDS CCA 90 bp | GAATGCGTTTGTTCATTTGTGTGTTTCCATGTGGTCATGTGCGAATaGTATCTCAGTTGCTTTTTGTGTATTTTACTTGGCTACGTGTGG | + |
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Preference number: 5 (lower is better) Translates to: ECVCSFVCFHVVMCE*YLSCFLCILLGYVW Trigger: CCACACGTAGCCAAGTAAAATACACAAAAAGCAACTGAGATACCATTCGCACATGACCACATGGAAACACACAAATGAACAAACGCATTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000570015.2 ENST00000663667.1 ENST00000669269.1 |
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| CDS CCA 90 bp | ATGTGGCTATGCCTGAATGCGTTTGTTCATTTGTGTGTTTCCATGTaGTCATGTGCGAATGGTATCTCAGTTGCTTTTTGTGTATTTTAC | + |
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Preference number: 5 (lower is better) Translates to: MWLCLNAFVHLCVSM*SCANGISVAFCVFY Trigger: GTAAAATACACAAAAAGCAACTGAGATACCATTCGCACATGACCACATGGAAACACACAAATGAACAAACGCATTCAGGCATAGCCACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000570015.2 ENST00000663667.1 ENST00000669269.1 |
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| CDS GCA 72 bp | GGCAGCGTGTGTGTTTTGCGCGCGTGTGTGTGTGCGTaGTCGTGTCTGCAGGAGGAGTGGGGCCGGCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: GSVCVLRACVCA*SCLQEEWGRQG Trigger: TCCCTGCCGGCCCCACTCCTCCTGCAGACACGAGCACGCACACACACACGCGCGCAAAACACACACGCTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000570015.2 ENST00000663667.1 ENST00000669269.1 |
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| CDS CAA 90 bp | GCTCGAGCTAAAGACGTCCCCGGCCTAGGGCAGCCCAGCCTGGCCTaGCCTGGATTCCAGACAGCATCCAGGGCCGACGTCTGGATCTGT | + |
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Preference number: 6 (lower is better) Translates to: ARAKDVPGLGQPSLA*PGFQTASRADVWIC Trigger: ACAGATCCAGACGTCGGCCCTGGATGCTGTCTGGAATCCAGGCAAGGCCAGGCTGGGCTGCCCTAGGCCGGGGACGTCTTTAGCTCGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663667.1 ENST00000669269.1 |
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| CDS CCA 72 bp | TTGCCTGGATTCCAGACAGCATCCAGGGCCGACGTCTaGATCTGTAGGGAGCGCTGTTCTCTGCCGCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: LPGFQTASRADV*ICRERCSLPPS Trigger: GGAGGGCGGCAGAGAACAGCGCTCCCTACAGATCCAGACGTCGGCCCTGGATGCTGTCTGGAATCCAGGCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663667.1 ENST00000669269.1 |
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| CDS CAA 90 bp | GTGTATTTTACTTGGCTACGTGTGGCGAAGGGCAGCGTGTGTGTTTaGCGCGCGTGTGTGTGTGCGTGCTCGTGTCTGCAGGAGGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: VYFTWLRVAKGSVCV*RACVCACSCLQEEW Trigger: CCACTCCTCCTGCAGACACGAGCACGCACACACACACGCGCGCAAAACACACACGCTGCCCTTCGCCACACGTAGCCAAGTAAAATACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000570015.2 ENST00000663667.1 ENST00000669269.1 |
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| CDS TCA 72 bp | TCCCTCCACTGGCTCCATCTGCCGTCGCTGAGGTCGTaGCAAGGAGGCAAACAGCAAAACGGCAAACAGCTG | + |
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Preference number: 6 (lower is better) Translates to: SLHWLHLPSLRS*QGGKQQNGKQL Trigger: CAGCTGTTTGCCGTTTTGCTGTTTGCCTCCTTGTCACGACCTCAGCGACGGCAGATGGAGCCAGTGGAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669269.1 |
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| CDS TCA 72 bp | TCCCTCCACTGGCTCCATCTGCCGTCGCTGAGGTCGTaGCAAGGAGGCAAACAGCAAAACGGCAAACAGCTA | + |
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Preference number: 6 (lower is better) Translates to: SLHWLHLPSLRS*QGGKQQNGKQL Trigger: TAGCTGTTTGCCGTTTTGCTGTTTGCCTCCTTGTCACGACCTCAGCGACGGCAGATGGAGCCAGTGGAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000570015.2 ENST00000626733.1 |
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| CDS TCA 72 bp | TCCCTCCACTGGCTCCATCTGCCGTCGCTGAGGTCGTaGCAAGGAGGCAAACAGCAAAACGGCAAACAGCTT | + |
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Preference number: 6 (lower is better) Translates to: SLHWLHLPSLRS*QGGKQQNGKQL Trigger: AAGCTGTTTGCCGTTTTGCTGTTTGCCTCCTTGTCACGACCTCAGCGACGGCAGATGGAGCCAGTGGAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663667.1 |
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| CDS TCA 72 bp | TGTCACGGAGGAGCGTGGGTGTCATCTGCTATACCATaGAGGAAAAGCCACAGGGTCCTTCTGTGCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: CHGGAWVSSAIP*RKSHRVLLCQQ Trigger: CTGCTGGCACAGAAGGACCCTGTGGCTTTTCCTTCATGGTATAGCAGATGACACCCACGCTCCTCCGTGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663667.1 ENST00000669269.1 |
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| CDS CCA 72 bp | AAGTCGTGGGTTCTAGTTCTAGCTCCAGTTATCAGCTaGGACCCTAGGGAATGTCACGGAGGAGCGTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: KSWVLVLAPVIS*DPRECHGGAWV Trigger: CACCCACGCTCCTCCGTGACATTCCCTAGGGTCCCAGCTGATAACTGGAGCTAGAACTAGAACCCACGACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663667.1 ENST00000669269.1 |
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| CDS CAA 90 bp | GTGCTGAGGCAGGTGAGCAAACCACAAATGAGGCTGTGGACAGCTTaGCTAGCCTGGAGCAACGAGCTGGATTCAGGAACCAGCATGAAG | + |
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Preference number: 6 (lower is better) Translates to: VLRQVSKPQMRLWTA*LAWSNELDSGTSMK Trigger: CTTCATGCTGGTTCCTGAATCCAGCTCGTTGCTCCAGGCTAGCAAAGCTGTCCACAGCCTCATTTGTGGTTTGCTCACCTGCCTCAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663667.1 ENST00000669269.1 |
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| CDS TCA 72 bp | ACGGCAAACAGCTGGATAGCAGGGGACTCCGGGTCCTaGAATGTTCACTCTTTGGTAGGTCCTGTGGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: TANSWIAGDSGS*NVHSLVGPVEE Trigger: CTCTTCCACAGGACCTACCAAAGAGTGAACATTTCAGGACCCGGAGTCCCCTGCTATCCAGCTGTTTGCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669269.1 |
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| CDS CAA 72 bp | GTGTGCGTGTGTAGGGGCATATACATCCAGGTGGCTTaGTGCCATGTGGCTTTGTACCCCAGGCTCTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: VCVCRGIYIQVA*CHVALYPRLLS Trigger: AGACAAGAGCCTGGGGTACAAAGCCACATGGCACAAAGCCACCTGGATGTATATGCCCCTACACACGCACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000570015.2 ENST00000663667.1 ENST00000669269.1 |
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| CDS CAA 72 bp | CAGGTGAGCAAACCACAAATGAGGCTGTGGACAGCTTaGCTAGCCTGGAGCAACGAGCTGGATTCAGGAACC | + |
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Preference number: 6 (lower is better) Translates to: QVSKPQMRLWTA*LAWSNELDSGT Trigger: GGTTCCTGAATCCAGCTCGTTGCTCCAGGCTAGCAAAGCTGTCCACAGCCTCATTTGTGGTTTGCTCACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663667.1 ENST00000669269.1 |
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| CDS GCA 72 bp | TTTCAGGAGCTGCAGCTGACACAATGGGAAGACCCCTaGGCAGAGAACCAAGAAGTCGTGGGTTCTAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: FQELQLTQWEDP*AENQEVVGSSS Trigger: AGAACTAGAACCCACGACTTCTTGGTTCTCTGCGCAGGGGTCTTCCCATTGTGTCAGCTGCAGCTCCTGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663667.1 ENST00000669269.1 |
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| CDS CCA 72 bp | TTTCTGTGTGCGTGTGTAGGGGCATATACATCCAGGTaGCTTTGTGCCATGTGGCTTTGTACCCCAGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: FLCACVGAYTSR*LCAMWLCTPGS Trigger: AGAGCCTGGGGTACAAAGCCACATGGCACAAAGCCACCTGGATGTATATGCCCCTACACACGCACACAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000570015.2 ENST00000663667.1 ENST00000669269.1 |
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| CDS CCA 72 bp | AATGGGAAGACCCCTGCGCAGAGAACCAAGAAGTCGTaGGTTCTAGTTCTAGCTCCAGTTATCAGCTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: NGKTPAQRTKKS*VLVLAPVISWD Trigger: GTCCCAGCTGATAACTGGAGCTAGAACTAGAACCCACGACTTCTTGGTTCTCTGCGCAGGGGTCTTCCCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663667.1 ENST00000669269.1 |
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| CDS CAA 90 bp | TACATCCAGGTGGCTTTGTGCCATGTGGCTTTGTACCCCAGGCTCTaGTCTATCCATCTGTGTGACTGGCATGTGGCTATGCCTGAATGC | + |
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Preference number: 6 (lower is better) Translates to: YIQVALCHVALYPRL*SIHLCDWHVAMPEC Trigger: GCATTCAGGCATAGCCACATGCCAGTCACACAGATGGATAGACAAGAGCCTGGGGTACAAAGCCACATGGCACAAAGCCACCTGGATGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000570015.2 ENST00000663667.1 ENST00000669269.1 |
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| CDS TCA 72 bp | AACCTGATTAGCTGGATAGCAGGGGACTCCGGGTCCTaGAATGTTCACTCTTTGGTAGGTCCTGTGGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: NLISWIAGDSGS*NVHSLVGPVEE Trigger: CTCTTCCACAGGACCTACCAAAGAGTGAACATTTCAGGACCCGGAGTCCCCTGCTATCCAGCTAATCAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626733.1 |
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| CDS CCA 72 bp | AAACCACAAATGAGGCTGTGGACAGCTTTGCTAGCCTaGAGCAACGAGCTGGATTCAGGAACCAGCATGAAG | + |
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Preference number: 6 (lower is better) Translates to: KPQMRLWTALLA*SNELDSGTSMK Trigger: CTTCATGCTGGTTCCTGAATCCAGCTCGTTGCTCCAGGCTAGCAAAGCTGTCCACAGCCTCATTTGTGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663667.1 ENST00000669269.1 |
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| CDS CAA 90 bp | ACGGCAAACAGCTATCCAGTCCATGTCTCACCAGCTGTCTTCATCTaGCCCAAGATCCTCTGGTTCTTTCTTCTCTGCAAATCCCATATG | + |
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Preference number: 6 (lower is better) Translates to: TANSYPVHVSPAVFI*PKILWFFLLCKSHM Trigger: CATATGGGATTTGCAGAGAAGAAAGAACCAGAGGATCTTGGGCAAGATGAAGACAGCTGGTGAGACATGGACTGGATAGCTGTTTGCCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000570015.2 ENST00000626733.1 |
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| CDS CCA 72 bp | CCAGGCTCTTGTCTATCCATCTGTGTGACTGGCATGTaGCTATGCCTGAATGCGTTTGTTCATTTGTGTGTT | + |
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Preference number: 6 (lower is better) Translates to: PGSCLSICVTGM*LCLNAFVHLCV Trigger: AACACACAAATGAACAAACGCATTCAGGCATAGCCACATGCCAGTCACACAGATGGATAGACAAGAGCCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000570015.2 ENST00000663667.1 ENST00000669269.1 |
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| CDS CCA 72 bp | TTGTACCCCAGGCTCTTGTCTATCCATCTGTGTGACTaGCATGTGGCTATGCCTGAATGCGTTTGTTCATTT | + |
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Preference number: 6 (lower is better) Translates to: LYPRLLSIHLCD*HVAMPECVCSF Trigger: AAATGAACAAACGCATTCAGGCATAGCCACATGCCAGTCACACAGATGGATAGACAAGAGCCTGGGGTACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000570015.2 ENST00000663667.1 ENST00000669269.1 |
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| CDS CAA 90 bp | ATCTGTGTGACTGGCATGTGGCTATGCCTGAATGCGTTTGTTCATTaGTGTGTTTCCATGTGGTCATGTGCGAATGGTATCTCAGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: ICVTGMWLCLNAFVH*CVSMWSCANGISVA Trigger: AGCAACTGAGATACCATTCGCACATGACCACATGGAAACACACAAATGAACAAACGCATTCAGGCATAGCCACATGCCAGTCACACAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000570015.2 ENST00000663667.1 ENST00000669269.1 |
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| CDS GCA 72 bp | TTCATCTTGCCCAAGATCCTCTGGTTCTTTCTTCTCTaGAAATCCCATATGCTTTCCCCAGCACCAGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: FILPKILWFFLL*KSHMLSPAPVF Trigger: AAAAACTGGTGCTGGGGAAAGCATATGGGATTTGCAGAGAAGAAAGAACCAGAGGATCTTGGGCAAGATGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000570015.2 ENST00000626733.1 |
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| CDS GCA 72 bp | TGTTTCCATGTGGTCATGTGCGAATGGTATCTCAGTTaGTTTTTGTGTATTTTACTTGGCTACGTGTGGCGA | + |
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Preference number: 6 (lower is better) Translates to: CFHVVMCEWYLS*FLCILLGYVWR Trigger: TCGCCACACGTAGCCAAGTAAAATACACAAAAAGCAACTGAGATACCATTCGCACATGACCACATGGAAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000570015.2 ENST00000663667.1 ENST00000669269.1 |
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