RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CISH (Homo sapiens)

Ensembl gene IDs: ENSG00000114737

Ensembl transcript IDs: ENST00000348721.4, ENST00000443053.6, ENST00000491847.1

Found 339 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGAGAGTGCCCATACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTaGAGGTCTGGGCCCAGCCCACAGGTGAGACAAGGTCCTGCCTGT +
Preference number: 1 (lower is better)
Translates to: LRVPIQFRWPGQASE*RSGPSPQVRQGPAC
Trigger: ACAGGCAGGACCTTGTCTCACCTGTGGGCTGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGTATGGGCACTCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR CCA 90 bp CTGGGGATTGAAAAACCAGGGCTGAGAGTGCCCATACAGTTCAGGTaGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCCAGCCCACAG +
Preference number: 1 (lower is better)
Translates to: LGIEKPGLRVPIQFR*PGQASEWRSGPSPQ
Trigger: CTGTGGGCTGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGTATGGGCACTCTCAGCCCTGGTTTTTCAATCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR GCA 90 bp GGACACATTCACAGACGGGTGGGTCAGTACCAGGACATCCAGGATTaGCTTGGTTCCAGCAAGATGTCTCAGGATGGGCTTTCCACAGGG +
Preference number: 1 (lower is better)
Translates to: GHIHRRVGQYQDIQD*LGSSKMSQDGLSTG
Trigger: CCCTGTGGAAAGCCCATCCTGAGACATCTTGCTGGAACCAAGGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR CCA 90 bp CCATCCTCTGACACATGGCTCAGTATAATGAAGCCACATGCGGCCTaGGGGCATTTACCTCCAAGTTGTGTGACACCTCCCCTCTCCCAT +
Preference number: 1 (lower is better)
Translates to: PSSDTWLSIMKPHAA*GHLPPSCVTPPLSH
Trigger: ATGGGAGAGGGGAGGTGTCACACAACTTGGAGGTAAATGCCCCCAGGCCGCATGTGGCTTCATTATACTGAGCCATGTGTCAGAGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR CCA 90 bp TGTAGTTGTCCATCCTCCCCAAATATGGCTGGGGGCAGAAGAGAGTaGACACATTCACAGACGGGTGGGTCAGTACCAGGACATCCAGGA +
Preference number: 1 (lower is better)
Translates to: CSCPSSPNMAGGRRE*THSQTGGSVPGHPG
Trigger: TCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTCTCTTCTGCCCCCAGCCATATTTGGGGAGGATGGACAACTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR CCA 90 bp AAATATGGCTGGGGGCAGAAGAGAGTGGACACATTCACAGACGGGTaGGTCAGTACCAGGACATCCAGGATTGCCTTGGTTCCAGCAAGA +
Preference number: 1 (lower is better)
Translates to: KYGWGQKRVDTFTDG*VSTRTSRIALVPAR
Trigger: TCTTGCTGGAACCAAGGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTCTCTTCTGCCCCCAGCCATATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR GCA 90 bp TTATTTCATGAAGTCTTATCAGACGTGTATTTCTCTCCTCTCATGTaGAGGCACCTTCCTGGGCAGGAAGCAGACCTAGCAGAACTGCAG +
Preference number: 1 (lower is better)
Translates to: LFHEVLSDVYFSPLM*RHLPGQEADLAELQ
Trigger: CTGCAGTTCTGCTAGGTCTGCTTCCTGCCCAGGAAGGTGCCTGCACATGAGAGGAGAGAAATACACGTCTGATAAGACTTCATGAAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR TCA 90 bp AGAGAAAAGACCACCAAACTGTTCTTTGCTATAATTATTATTTCATaGAGTCTTATCAGACGTGTATTTCTCTCCTCTCATGTGCAGGCA +
Preference number: 1 (lower is better)
Translates to: REKTTKLFFAIIIIS*SLIRRVFLSSHVQA
Trigger: TGCCTGCACATGAGAGGAGAGAAATACACGTCTGATAAGACTTCATGAAATAATAATTATAGCAAAGAACAGTTTGGTGGTCTTTTCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR TCA 90 bp CTGGCTCTTCCTGGGCCAGCTGCCAGAGGTATGCAGGCACCAGGATGCCTGGAGCAGGGTGCGACTGGGTaGGGGTGGGCAGATTGCCCC +
Preference number: 2 (lower is better)
Translates to: LALPGPAARGMQAPGCLEQGATG*GWADCP
Trigger: GGGGCAATCTGCCCACCCTCACCCAGTCGCACCCTG...CTCCAGGCATCCTGGTGCCTGCATACCTCTGGCAGCTGGCCCAGGAAGAGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR CCA 90 bp TGCCCATACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCCAAGGCACCAGGATGCCTaGAGGAGGGACAGTGGGGGC +
Preference number: 2 (lower is better)
Translates to: CPYSSGGQGRQASGGLGPRHQDA*RRDSGG
Trigger: GCCCCCACTGTCCCTCCTCCAGGCATCCTGGTGCCT...TGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGTATGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR TCA 90 bp CCCCGGGGCCTGCGCCACAGTGAGACCAGCTCTATGCAGATACAGCTCTGTCCTGGCCCAGCCCACAGGTaGGACAAGGTCCTGCCTGTC +
Preference number: 2 (lower is better)
Translates to: PRGLRHSETSSMQIQLCPGPAHR*DKVLPV
Trigger: GACAGGCAGGACCTTGTCTCACCTGTGGGCTGGGCC...AGGACAGAGCTGTATCTGCATAGAGCTGGTCTCACTGTGGCGCAGGCCCCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR CCA 90 bp ACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCCAGCCCACACTTGCTGGCTCTTCCTaGGCCAGCTGCCAGAGGTAT +
Preference number: 2 (lower is better)
Translates to: TVQVARAGKRVEVWAQPTLAGSS*ASCQRY
Trigger: ATACCTCTGGCAGCTGGCCCAGGAAGAGCCAGCAAG...TGTGGGCTGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR GCA 90 bp CCCCGGGGCCTGCGCCACAGTGAGACCAGCTCTATGCAGATACAGCTCTGTCCTCAGCTGCCAGAGGTATaGAGGCACCAGGATGCCTGG +
Preference number: 2 (lower is better)
Translates to: PRGLRHSETSSMQIQLCPQLPEV*RHQDAW
Trigger: CCAGGCATCCTGGTGCCTGCATACCTCTGGCAGCTG...AGGACAGAGCTGTATCTGCATAGAGCTGGTCTCACTGTGGCGCAGGCCCCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR CCA 90 bp CCCCGGGGCCTGCGCCACAGTGAGACCAGCTCTATGCAGATACAGCTCTGTCCTCAGAGTTGGGGTCTCTaGACTACCAGGGCTCAGGGC +
Preference number: 2 (lower is better)
Translates to: PRGLRHSETSSMQIQLCPQSWGL*TTRAQG
Trigger: GCCCTGAGCCCTGGTAGTCCAGAGACCCCAACTCTG...AGGACAGAGCTGTATCTGCATAGAGCTGGTCTCACTGTGGCGCAGGCCCCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR TCA 90 bp AGAGTGGACACATTCACAGACGGGTGGGTCAGTACCAGGACATCCAGGATTGCCCAGGGTGCGACTGGGTaGGGGTGGGCAGATTGCCCC +
Preference number: 2 (lower is better)
Translates to: RVDTFTDGWVSTRTSRIAQGATG*GWADCP
Trigger: GGGGCAATCTGCCCACCCTCACCCAGTCGCACCCTG...GGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR GCA 90 bp CCCCGGGGCCTGCGCCACAGTGAGACCAGCTCTATGCAGATACAGCTCTGTCCTACCTCCCCTCTCCCATaGCTTGCTCTTGCTGGCTCT +
Preference number: 2 (lower is better)
Translates to: PRGLRHSETSSMQIQLCPTSPLP*LALAGS
Trigger: AGAGCCAGCAAGAGCAAGGCATGGGAGAGGGGAGGT...AGGACAGAGCTGTATCTGCATAGAGCTGGTCTCACTGTGGCGCAGGCCCCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR GCA 90 bp CCCCGGGGCCTGCGCCACAGTGAGACCAGCTCTATGCAGATACAGCTCTGTCCTGGTGAGACAAGGTCCTaGCTGTCTCCCCATCCTCTG +
Preference number: 2 (lower is better)
Translates to: PRGLRHSETSSMQIQLCPGETRS*LSPHPL
Trigger: CAGAGGATGGGGAGACAGGCAGGACCTTGTCTCACC...AGGACAGAGCTGTATCTGCATAGAGCTGGTCTCACTGTGGCGCAGGCCCCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR CCA 90 bp CCCCGGGGCCTGCGCCACAGTGAGACCAGCTCTATGCAGATACAGCTCTGTCCTATGCCTTGCTCTTGCTaGCTCTTCCTGGGCCAGCTG +
Preference number: 2 (lower is better)
Translates to: PRGLRHSETSSMQIQLCPMPCSC*LFLGQL
Trigger: CAGCTGGCCCAGGAAGAGCCAGCAAGAGCAAGGCAT...AGGACAGAGCTGTATCTGCATAGAGCTGGTCTCACTGTGGCGCAGGCCCCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR CCA 90 bp TGTCGATCTCAGTTCCTCTGCATGTCATCCTCCCAGAAACAGAGGCTGGCTGCCGGGCAGGCAAGCGAGTaGAGGTCTGGGCCCAGCCCA +
Preference number: 2 (lower is better)
Translates to: CRSQFLCMSSSQKQRLAAGQASE*RSGPSP
Trigger: TGGGCTGGGCCCAGACCTCCACTCGCTTGCCTGCCC...GGCAGCCAGCCTCTGTTTCTGGGAGGATGACATGCAGAGGAACTGAGATCGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR CCA 90 bp AGAGTGGACACATTCACAGACGGGTGGGTCAGTACCAGGACATCCAGGATTGCCGGGCAGGCAAGCGAGTaGAGGTCTGGGCCCAGCCCA +
Preference number: 2 (lower is better)
Translates to: RVDTFTDGWVSTRTSRIAGQASE*RSGPSP
Trigger: TGGGCTGGGCCCAGACCTCCACTCGCTTGCCTGCCC...GGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR TCA 90 bp CCATCCTCTGACACATGGCTCAGTATAATGAAGCCACATGCGGCCTGGGGGCATAAGTCCAGCTGGGGCTaGTGTCCCCTCCAGGGTGCG +
Preference number: 2 (lower is better)
Translates to: PSSDTWLSIMKPHAAWGHKSSWG*CPLQGA
Trigger: CGCACCCTGGAGGGGACATCAGCCCCAGCTGGACTT...ATGCCCCCAGGCCGCATGTGGCTTCATTATACTGAGCCATGTGTCAGAGGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR TCA 90 bp CTGTCGATCTCAGTTCCTCTGCATGTCATCCTCCCAGAAACAGAGGCTGGCTGCGGCCCAGCCCACAGGTaGGACAAGGTCCTGCCTGTC +
Preference number: 2 (lower is better)
Translates to: LSISVPLHVILPETEAGCGPAHR*DKVLPV
Trigger: GACAGGCAGGACCTTGTCTCACCTGTGGGCTGGGCC...GCAGCCAGCCTCTGTTTCTGGGAGGATGACATGCAGAGGAACTGAGATCGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR GCA 90 bp TGTCGATCTCAGTTCCTCTGCATGTCATCCTCCCAGAAACAGAGGCTGGCTGCCATGTCCCCTCCAGGGTaGGACTGGGTGAGGGTGGGC +
Preference number: 2 (lower is better)
Translates to: CRSQFLCMSSSQKQRLAAMSPPG*DWVRVG
Trigger: GCCCACCCTCACCCAGTCGCACCCTGGAGGGGACAT...GGCAGCCAGCCTCTGTTTCTGGGAGGATGACATGCAGAGGAACTGAGATCGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR CCA 90 bp GAGTGGACACATTCACAGACGGGTGGGTCAGTACCAGGACATCCAGGATTGCCTAGGCACCAGGATGCCTaGAGGAGGGACAGTGGGGGC +
Preference number: 2 (lower is better)
Translates to: EWTHSQTGGSVPGHPGLPRHQDA*RRDSGG
Trigger: GCCCCCACTGTCCCTCCTCCAGGCATCCTGGTGCCT...AGGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR CCA 90 bp CCCCGGGGCCTGCGCCACAGTGAGACCAGCTCTATGCAGATACAGCTCTGTCCTCTCCCCAAATATGGCTaGGGGCAGAAGAGAGTGGAC +
Preference number: 2 (lower is better)
Translates to: PRGLRHSETSSMQIQLCPLPKYG*GQKRVD
Trigger: GTCCACTCTCTTCTGCCCCCAGCCATATTTGGGGAG...AGGACAGAGCTGTATCTGCATAGAGCTGGTCTCACTGTGGCGCAGGCCCCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR CCA 90 bp GGAAGCAGACCTAGCAGAACTGCAGTGGCGGCCCTCAAACCAGCACCCCCTCTTAAGCCACATGCGGCCTaGGGGCATTTACCTCCAAGT +
Preference number: 2 (lower is better)
Translates to: GSRPSRTAVAALKPAPPLKPHAA*GHLPPS
Trigger: ACTTGGAGGTAAATGCCCCCAGGCCGCATGTGGCTT...AAGAGGGGGTGCTGGTTTGAGGGCCGCCACTGCAGTTCTGCTAGGTCTGCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR CCA 90 bp CCCCGGGGCCTGCGCCACAGTGAGACCAGCTCTATGCAGATACAGCTCTGTCCTACATTCACAGACGGGTaGGTCAGTACCAGGACATCC +
Preference number: 2 (lower is better)
Translates to: PRGLRHSETSSMQIQLCPTFTDG*VSTRTS
Trigger: GGATGTCCTGGTACTGACCCACCCGTCTGTGAATGT...AGGACAGAGCTGTATCTGCATAGAGCTGGTCTCACTGTGGCGCAGGCCCCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR TCA 90 bp TTGTCCATCCTCCCCAAATATGGCTGGGGGCAGAAGAGAGTGGACACATTCACAAAGTCCAGCTGGGGCTaGTGTCCCCTCCAGGGTGCG +
Preference number: 2 (lower is better)
Translates to: LSILPKYGWGQKRVDTFTKSSWG*CPLQGA
Trigger: CGCACCCTGGAGGGGACATCAGCCCCAGCTGGACTT...TGTGAATGTGTCCACTCTCTTCTGCCCCCAGCCATATTTGGGGAGGATGGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR GCA 90 bp TGGTTCCAGCAAGATGTCTCAGGATGGGCTTTCCACAGGGAAGAACCAGAGAAGATGTCCCCTCCAGGGTaGGACTGGGTGAGGGTGGGC +
Preference number: 2 (lower is better)
Translates to: WFQQDVSGWAFHREEPEKMSPPG*DWVRVG
Trigger: GCCCACCCTCACCCAGTCGCACCCTGGAGGGGACAT...CTTCTCTGGTTCTTCCCTGTGGAAAGCCCATCCTGAGACATCTTGCTGGAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR GCA 90 bp GAGTGGACACATTCACAGACGGGTGGGTCAGTACCAGGACATCCAGGATTGCCTCAGCTGCCAGAGGTATaGAGGCACCAGGATGCCTGG +
Preference number: 2 (lower is better)
Translates to: EWTHSQTGGSVPGHPGLPQLPEV*RHQDAW
Trigger: CCAGGCATCCTGGTGCCTGCATACCTCTGGCAGCTG...AGGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR GCA 90 bp AGAGTGGACACATTCACAGACGGGTGGGTCAGTACCAGGACATCCAGGATTGCCCCCATGCCTTGCTCTTaGTGGCTCTTCCTGGGCCAG +
Preference number: 2 (lower is better)
Translates to: RVDTFTDGWVSTRTSRIAPMPCS*WLFLGQ
Trigger: CTGGCCCAGGAAGAGCCAGCAAGAGCAAGGCATGGG...GGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR GCA 90 bp CCCCGGGGCCTGCGCCACAGTGAGACCAGCTCTATGCAGATACAGCTCTGTCCTTATAATGAAGCCACATaGGGCCTGGGGGCATTTACC +
Preference number: 2 (lower is better)
Translates to: PRGLRHSETSSMQIQLCPYNEAT*GLGAFT
Trigger: GGTAAATGCCCCCAGGCCGCATGTGGCTTCATTATA...AGGACAGAGCTGTATCTGCATAGAGCTGGTCTCACTGTGGCGCAGGCCCCGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR CCA 90 bp TGTCGATCTCAGTTCCTCTGCATGTCATCCTCCCAGAAACAGAGGCTGGCTGCCCCCATACAGTTCAGGTaGCCAGGGCAGGCAAGCGAG +
Preference number: 2 (lower is better)
Translates to: CRSQFLCMSSSQKQRLAAPIQFR*PGQASE
Trigger: CTCGCTTGCCTGCCCTGGCCACCTGAACTGTATGGG...GGCAGCCAGCCTCTGTTTCTGGGAGGATGACATGCAGAGGAACTGAGATCGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR TCA 90 bp TGTCGATCTCAGTTCCTCTGCATGTCATCCTCCCAGAAACAGAGGCTGGCTGCCCCCGACCCTGGGGATTaGAAAACCAGGGCTGAGAGT +
Preference number: 2 (lower is better)
Translates to: CRSQFLCMSSSQKQRLAAPDPGD*KTRAES
Trigger: ACTCTCAGCCCTGGTTTTTCAATCCCCAGGGTCGGG...GGCAGCCAGCCTCTGTTTCTGGGAGGATGACATGCAGAGGAACTGAGATCGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR TCA 90 bp TGGTTCCAGCAAGATGTCTCAGGATGGGCTTTCCACAGGGAAGAACCAGAGAAGGGGTTGGCTCGCCCCTaGCACCAACCCCAAGGAGAA +
Preference number: 2 (lower is better)
Translates to: WFQQDVSGWAFHREEPEKGLARP*HQPQGE
Trigger: TTCTCCTTGGGGTTGGTGTCAGGGGCGAGCCAACCC...CTTCTCTGGTTCTTCCCTGTGGAAAGCCCATCCTGAGACATCTTGCTGGAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR GCA 90 bp TGTCGATCTCAGTTCCTCTGCATGTCATCCTCCCAGAAACAGAGGCTGGCTGCCACCTCCCCTCTCCCATaGCTTGCTCTTGCTGGCTCT +
Preference number: 2 (lower is better)
Translates to: CRSQFLCMSSSQKQRLAATSPLP*LALAGS
Trigger: AGAGCCAGCAAGAGCAAGGCATGGGAGAGGGGAGGT...GGCAGCCAGCCTCTGTTTCTGGGAGGATGACATGCAGAGGAACTGAGATCGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR GCA 90 bp GGAAGCAGACCTAGCAGAACTGCAGTGGCGGCCCTCAAACCAGCACCCCCTCTTGTGAGACCAGCTCTATaGAGATACAGCTCTGTCCTG +
Preference number: 2 (lower is better)
Translates to: GSRPSRTAVAALKPAPPLVRPAL*RYSSVL
Trigger: CAGGACAGAGCTGTATCTGCATAGAGCTGGTCTCAC...AAGAGGGGGTGCTGGTTTGAGGGCCGCCACTGCAGTTCTGCTAGGTCTGCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR CCA 90 bp AGAGTGGACACATTCACAGACGGGTGGGTCAGTACCAGGACATCCAGGATTGCCCTTGCTGGCTCTTCCTaGGCCAGCTGCCAGAGGTAT +
Preference number: 2 (lower is better)
Translates to: RVDTFTDGWVSTRTSRIALAGSS*ASCQRY
Trigger: ATACCTCTGGCAGCTGGCCCAGGAAGAGCCAGCAAG...GGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR CCA 90 bp GAGTGGACACATTCACAGACGGGTGGGTCAGTACCAGGACATCCAGGATTGCCTCCCAGAAACAGAGGCTaGCTGCCAGTAGGGGTCCTA +
Preference number: 2 (lower is better)
Translates to: EWTHSQTGGSVPGHPGLPPRNRG*LPVGVL
Trigger: TAGGACCCCTACTGGCAGCCAGCCTCTGTTTCTGGG...AGGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR CCA 90 bp GAGTGGACACATTCACAGACGGGTGGGTCAGTACCAGGACATCCAGGATTGCCTTGCAGTCCCCTAGCCTaGCTTACCCCTCAACAAGGG +
Preference number: 2 (lower is better)
Translates to: EWTHSQTGGSVPGHPGLPCSPLA*LTPQQG
Trigger: CCCTTGTTGAGGGGTAAGCCAGGCTAGGGGACTGCA...AGGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR TCA 90 bp TGTCGATCTCAGTTCCTCTGCATGTCATCCTCCCAGAAACAGAGGCTGGCTGCCTACCTCCAAGTTGTGTaGCACCTCCCCTCTCCCATG +
Preference number: 2 (lower is better)
Translates to: CRSQFLCMSSSQKQRLAAYLQVV*HLPSPM
Trigger: CATGGGAGAGGGGAGGTGTCACACAACTTGGAGGTA...GGCAGCCAGCCTCTGTTTCTGGGAGGATGACATGCAGAGGAACTGAGATCGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR GCA 90 bp TGGTTCCAGCAAGATGTCTCAGGATGGGCTTTCCACAGGGAAGAACCAGAGAAGTCTTCCTGGGCCAGCTaGCAGAGGTATGCAGGCACC +
Preference number: 2 (lower is better)
Translates to: WFQQDVSGWAFHREEPEKSSWAS*QRYAGT
Trigger: GGTGCCTGCATACCTCTGGCAGCTGGCCCAGGAAGA...CTTCTCTGGTTCTTCCCTGTGGAAAGCCCATCCTGAGACATCTTGCTGGAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR GCA 90 bp TTGTCCATCCTCCCCAAATATGGCTGGGGGCAGAAGAGAGTGGACACATTCACACCCATGCCTTGCTCTTaGTGGCTCTTCCTGGGCCAG +
Preference number: 2 (lower is better)
Translates to: LSILPKYGWGQKRVDTFTPMPCS*WLFLGQ
Trigger: CTGGCCCAGGAAGAGCCAGCAAGAGCAAGGCATGGG...TGTGAATGTGTCCACTCTCTTCTGCCCCCAGCCATATTTGGGGAGGATGGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR GCA 90 bp GGAAGCAGACCTAGCAGAACTGCAGTGGCGGCCCTCAAACCAGCACCCCCTCTTCGATCTCAGTTCCTCTaGATGTCATCCTCCCAGAAA +
Preference number: 2 (lower is better)
Translates to: GSRPSRTAVAALKPAPPLRSQFL*MSSSQK
Trigger: TTTCTGGGAGGATGACATGCAGAGGAACTGAGATCG...AAGAGGGGGTGCTGGTTTGAGGGCCGCCACTGCAGTTCTGCTAGGTCTGCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR CCA 90 bp TTGTCCATCCTCCCCAAATATGGCTGGGGGCAGAAGAGAGTGGACACATTCACACAGAGTTGGGGTCTCTaGACTACCAGGGCTCAGGGC +
Preference number: 2 (lower is better)
Translates to: LSILPKYGWGQKRVDTFTQSWGL*TTRAQG
Trigger: GCCCTGAGCCCTGGTAGTCCAGAGACCCCAACTCTG...TGTGAATGTGTCCACTCTCTTCTGCCCCCAGCCATATTTGGGGAGGATGGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR GCA 90 bp TGGTTCCAGCAAGATGTCTCAGGATGGGCTTTCCACAGGGAAGAACCAGAGAAGGGTGAGACAAGGTCCTaGCTGTCTCCCCATCCTCTG +
Preference number: 2 (lower is better)
Translates to: WFQQDVSGWAFHREEPEKGETRS*LSPHPL
Trigger: CAGAGGATGGGGAGACAGGCAGGACCTTGTCTCACC...CTTCTCTGGTTCTTCCCTGTGGAAAGCCCATCCTGAGACATCTTGCTGGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR CAA 90 bp ACATTCACAGACGGGTGGGTCAGTACCAGGACATCCAGGATTGCCTaGGTTCCAGCAAGATGTCTCAGGATGGGCTTTCCACAGGGAAGA +
Preference number: 2 (lower is better)
Translates to: TFTDGWVSTRTSRIA*VPARCLRMGFPQGR
Trigger: TCTTCCCTGTGGAAAGCCCATCCTGAGACATCTTGCTGGAACCAAGGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR CCA 90 bp AGAGTGGACACATTCACAGACGGGTGGGTCAGTACCAGGACATCCAGGATTGCCCCATCCTCTGACACATaGCTCAGTATAATGAAGCCA +
Preference number: 2 (lower is better)
Translates to: RVDTFTDGWVSTRTSRIAPSSDT*LSIMKP
Trigger: TGGCTTCATTATACTGAGCCATGTGTCAGAGGATGG...GGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR CCA 72 bp GTTCAGGTGGCCAGGGCAGGCAAGCGAGTGGAGGTCTaGGCCCAGCCCACAGGTGAGACAAGGTCCTGCCTG +
Preference number: 3 (lower is better)
Translates to: VQVARAGKRVEV*AQPTGETRSCL
Trigger: CAGGCAGGACCTTGTCTCACCTGTGGGCTGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR TCA 72 bp AGGCAAGCGAGTGGAGGTCTGGGCCCAGCCCACAGGTaGGACAAGGTCCTGCCTGTCTCCCCATCCTCTGAC +
Preference number: 3 (lower is better)
Translates to: RQASGGLGPAHR*DKVLPVSPSSD
Trigger: GTCAGAGGATGGGGAGACAGGCAGGACCTTGTCTCACCTGTGGGCTGGGCCCAGACCTCCACTCGCTTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR CCA 72 bp CCCATACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTaGAGGTCTGGGCCCAGCCCACAGGTGAGACAAGGT +
Preference number: 3 (lower is better)
Translates to: PIQFRWPGQASE*RSGPSPQVRQG
Trigger: ACCTTGTCTCACCTGTGGGCTGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGTATGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR CCA 72 bp GAAAAACCAGGGCTGAGAGTGCCCATACAGTTCAGGTaGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCC +
Preference number: 3 (lower is better)
Translates to: EKPGLRVPIQFR*PGQASEWRSGP
Trigger: GGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGTATGGGCACTCTCAGCCCTGGTTTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR TCA 72 bp GGTCCTACCCGACCCTGGGGATTGAAAAACCAGGGCTaGGAGTGCCCATACAGTTCAGGTGGCCAGGGCAGG +
Preference number: 3 (lower is better)
Translates to: GPTRPWGLKNQG*ECPYSSGGQGR
Trigger: CCTGCCCTGGCCACCTGAACTGTATGGGCACTCTCAGCCCTGGTTTTTCAATCCCCAGGGTCGGGTAGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR GCA 72 bp GAGGTCTGGGCCCAGCCCACAGGTGAGACAAGGTCCTaGCTGTCTCCCCATCCTCTGACACATGGCTCAGTA +
Preference number: 3 (lower is better)
Translates to: EVWAQPTGETRS*LSPHPLTHGSV
Trigger: TACTGAGCCATGTGTCAGAGGATGGGGAGACAGGCAGGACCTTGTCTCACCTGTGGGCTGGGCCCAGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR CAA 90 bp GAAAAACCAGGGCTGAGAGTGCCCATACAGTTCAGGTGGCCAGGGCAGGCAAGCTCCCATGCCTTGCTCTaGCTGGCTCTTCCTGGGCCA +
Preference number: 3 (lower is better)
Translates to: EKPGLRVPIQFRWPGQASSHALL*LALPGP
Trigger: TGGCCCAGGAAGAGCCAGCAAGAGCAAGGCATGGGA...GCTTGCCTGCCCTGGCCACCTGAACTGTATGGGCACTCTCAGCCCTGGTTTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR CAA 90 bp GAGTGGACACATTCACAGACGGGTGGGTCAGTACCAGGACATCCAGGATTGCCTTCCCATGCCTTGCTCTaGCTGGCTCTTCCTGGGCCA +
Preference number: 3 (lower is better)
Translates to: EWTHSQTGGSVPGHPGLPSHALL*LALPGP
Trigger: TGGCCCAGGAAGAGCCAGCAAGAGCAAGGCATGGGA...AGGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR CCA 72 bp CCATCCTCCCCAAATATGGCTGGGGGCAGAAGAGAGTaGACACATTCACAGACGGGTGGGTCAGTACCAGGA +
Preference number: 3 (lower is better)
Translates to: PSSPNMAGGRRE*THSQTGGSVPG
Trigger: TCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTCTCTTCTGCCCCCAGCCATATTTGGGGAGGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR-3UTR CAA 90 bp TTGTCCATCCTCCCCAAATATGGCTGGGGGCAGAAGAGAGTGGACACATTCACACCCCTCTCCCATGCCTaGCTCTTGCTGGCTCTTCCT +
Preference number: 3 (lower is better)
Translates to: LSILPKYGWGQKRVDTFTPLSHA*LLLALP
Trigger: AGGAAGAGCCAGCAAGAGCAAGGCATGGGAGAGGGG...TGTGAATGTGTCCACTCTCTTCTGCCCCCAGCCATATTTGGGGAGGATGGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR GCA 72 bp CACAGACGGGTGGGTCAGTACCAGGACATCCAGGATTaGCTTGGTTCCAGCAAGATGTCTCAGGATGGGCTT +
Preference number: 3 (lower is better)
Translates to: HRRVGQYQDIQD*LGSSKMSQDGL
Trigger: AAGCCCATCCTGAGACATCTTGCTGGAACCAAGGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR CCA 72 bp TGGGGGCAGAAGAGAGTGGACACATTCACAGACGGGTaGGTCAGTACCAGGACATCCAGGATTGCCTTGGTT +
Preference number: 3 (lower is better)
Translates to: WGQKRVDTFTDG*VSTRTSRIALV
Trigger: AACCAAGGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTCTCTTCTGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR CCA 72 bp GACACATGGCTCAGTATAATGAAGCCACATGCGGCCTaGGGGCATTTACCTCCAAGTTGTGTGACACCTCCC +
Preference number: 3 (lower is better)
Translates to: DTWLSIMKPHAA*GHLPPSCVTPP
Trigger: GGGAGGTGTCACACAACTTGGAGGTAAATGCCCCCAGGCCGCATGTGGCTTCATTATACTGAGCCATGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp AGTCCAGCTGGGGCTGATGTCCCCTCCAGGGTGCGACTGGGTGAGGGTGGGCAGGAGTGGGGACTCGGCTaGACGGCGGCGGCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: SPAGADVPSRVRLGEGGQEWGLG*TAAAGG
Trigger: CCCTCCAGCCGCCGCCGTCCAGCCGAGTCCCCACTC...CTGCCCACCCTCACCCAGTCGCACCCTGGAGGGGACATCAGCCCCAGCTGGACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp AGTCCAGCTGGGGCTGATGTCCCCTCCAGGGTGCGACTGGGTGAGGGTGGGCAGGGAGGTAGTCGGCCATaGGCCGGGGCAGTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: SPAGADVPSRVRLGEGGQGGSRP*AGAVAG
Trigger: GCCTGCCACTGCCCCGGCGCATGGCCGACTACCTCC...CTGCCCACCCTCACCCAGTCGCACCCTGGAGGGGACATCAGCCCCAGCTGGACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR TCA 90 bp GGCCCAAGTCCAGCTGGGGCTGATGTCCCCTCCAGGGTGCGACTGGGTGAGGGTCAGGGTGCGACTGGGTaGGGGTGGGCAGATTGCCCC +
Preference number: 4 (lower is better)
Translates to: GPSPAGADVPSRVRLGEGQGATG*GWADCP
Trigger: GGGGCAATCTGCCCACCCTCACCCAGTCGCACCCTG...ACCCTCACCCAGTCGCACCCTGGAGGGGACATCAGCCCCAGCTGGACTTGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp CTGGCTCTTCCTGGGCCAGCTGCCAGAGGTATGCAGGCACCAGGATGCCTGGAGGCCCACAGGGGCCGCTaGCCAGTCCGCTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: LALPGPAARGMQAPGCLEAHRGR*PVRSTA
Trigger: GGCTGTGGAGCGGACTGGGCAGCGGCCCCTGTGGGC...CTCCAGGCATCCTGGTGCCTGCATACCTCTGGCAGCTGGCCCAGGAAGAGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp ACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCCAGCCCACAGGAGGTAGTCGGCCATaGGCCGGGGCAGTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: TVQVARAGKRVEVWAQPTGGSRP*AGAVAG
Trigger: GCCTGCCACTGCCCCGGCGCATGGCCGACTACCTCC...TGTGGGCTGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp TGCCCATACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCCAGCGGCGACTCCGGAGTaGGGACTCGGCTGGACGGCG +
Preference number: 4 (lower is better)
Translates to: CPYSSGGQGRQASGGLGPAATPE*GLGWTA
Trigger: CGCCGTCCAGCCGAGTCCCCACTCCGGAGTCGCCGC...TGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGTATGGGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR TCA 90 bp GTCCAGCTGGGGCTGATGTCCCCTCCAGGGTGCGACTGGGTGAGGGTGGGCAGAAAGTCCAGCTGGGGCTaGTGTCCCCTCCAGGGTGCG +
Preference number: 4 (lower is better)
Translates to: VQLGLMSPPGCDWVRVGRKSSWG*CPLQGA
Trigger: CGCACCCTGGAGGGGACATCAGCCCCAGCTGGACTT...TCTGCCCACCCTCACCCAGTCGCACCCTGGAGGGGACATCAGCCCCAGCTGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR TCA 90 bp GTCCAGCTGGGGCTGATGTCCCCTCCAGGGTGCGACTGGGTGAGGGTGGGCAGAGGCCCAGCCCACAGGTaGGACAAGGTCCTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: VQLGLMSPPGCDWVRVGRGPAHR*DKVLPV
Trigger: GACAGGCAGGACCTTGTCTCACCTGTGGGCTGGGCC...TCTGCCCACCCTCACCCAGTCGCACCCTGGAGGGGACATCAGCCCCAGCTGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp CCCCGGGGCCTGCGCCACAGTGAGACCAGCTCTATGCAGATACAGCTCTGTCCTGCCCACAGGGGCCGCTaGCCAGTCCGCTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: PRGLRHSETSSMQIQLCPAHRGR*PVRSTA
Trigger: GGCTGTGGAGCGGACTGGGCAGCGGCCCCTGTGGGC...AGGACAGAGCTGTATCTGCATAGAGCTGGTCTCACTGTGGCGCAGGCCCCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp CTTGCTGGCTCTTCCTGGGCCAGCTGCCAGAGGTATGCAGGCACCAGGATGCCTGCGGCGACTCCGGAGTaGGGACTCGGCTGGACGGCG +
Preference number: 4 (lower is better)
Translates to: LAGSSWASCQRYAGTRMPAATPE*GLGWTA
Trigger: CGCCGTCCAGCCGAGTCCCCACTCCGGAGTCGCCGC...AGGCATCCTGGTGCCTGCATACCTCTGGCAGCTGGCCCAGGAAGAGCCAGCAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp CTGGCTCTTCCTGGGCCAGCTGCCAGAGGTATGCAGGCACCAGGATGCCTGGAGCATGCGCCGGGGCAGTaGCAGGCAGTCCACGTCGGC +
Preference number: 4 (lower is better)
Translates to: LALPGPAARGMQAPGCLEHAPGQ*QAVHVG
Trigger: GCCGACGTGGACTGCCTGCCACTGCCCCGGCGCATG...CTCCAGGCATCCTGGTGCCTGCATACCTCTGGCAGCTGGCCCAGGAAGAGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp ACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCCAGCCCACAGGGCAGGCAAGCGAGTaGAGGTCTGGGCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: TVQVARAGKRVEVWAQPTGQASE*RSGPSP
Trigger: TGGGCTGGGCCCAGACCTCCACTCGCTTGCCTGCCC...TGTGGGCTGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR TCA 90 bp ACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCCAGCCCACAGGGGGTGCTCACCCCTaGACGCAGAGGACCATGTCC +
Preference number: 4 (lower is better)
Translates to: TVQVARAGKRVEVWAQPTGGAHP*TQRTMS
Trigger: GGACATGGTCCTCTGCGTTCAGGGGTGAGCACCCCC...TGTGGGCTGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443053.6
CDS-3UTR TCA 90 bp ACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCCAGCCCACAGGGTTGGCTCGCCCCTaGCACCAACCCCAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: TVQVARAGKRVEVWAQPTGLARP*HQPQGE
Trigger: TTCTCCTTGGGGTTGGTGTCAGGGGCGAGCCAACCC...TGTGGGCTGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp AGTCCAGCTGGGGCTGATGTCCCCTCCAGGGTGCGACTGGGTGAGGGTGGGCAGCAGCTGCCAGAGGTATaGAGGCACCAGGATGCCTGG +
Preference number: 4 (lower is better)
Translates to: SPAGADVPSRVRLGEGGQQLPEV*RHQDAW
Trigger: CCAGGCATCCTGGTGCCTGCATACCTCTGGCAGCTG...CTGCCCACCCTCACCCAGTCGCACCCTGGAGGGGACATCAGCCCCAGCTGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp GGCCCAAGTCCAGCTGGGGCTGATGTCCCCTCCAGGGTGCGACTGGGTGAGGGTTCTTCCTGGGCCAGCTaGCAGAGGTATGCAGGCACC +
Preference number: 4 (lower is better)
Translates to: GPSPAGADVPSRVRLGEGSSWAS*QRYAGT
Trigger: GGTGCCTGCATACCTCTGGCAGCTGGCCCAGGAAGA...ACCCTCACCCAGTCGCACCCTGGAGGGGACATCAGCCCCAGCTGGACTTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp ACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCCAGCCCACAGGCTCACTCTCTGTCTaGGCTGGGGTACCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: TVQVARAGKRVEVWAQPTGSLSV*AGVPSA
Trigger: GGCAGAGGGTACCCCAGCCCAGACAGAGAGTGAGCC...TGTGGGCTGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp CTTGCTGGCTCTTCCTGGGCCAGCTGCCAGAGGTATGCAGGCACCAGGATGCCTGGGCAGGCAAGCGAGTaGAGGTCTGGGCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: LAGSSWASCQRYAGTRMPGQASE*RSGPSP
Trigger: TGGGCTGGGCCCAGACCTCCACTCGCTTGCCTGCCC...AGGCATCCTGGTGCCTGCATACCTCTGGCAGCTGGCCCAGGAAGAGCCAGCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp GTCCAGCTGGGGCTGATGTCCCCTCCAGGGTGCGACTGGGTGAGGGTGGGCAGACCCATACAGTTCAGGTaGCCAGGGCAGGCAAGCGAG +
Preference number: 4 (lower is better)
Translates to: VQLGLMSPPGCDWVRVGRPIQFR*PGQASE
Trigger: CTCGCTTGCCTGCCCTGGCCACCTGAACTGTATGGG...TCTGCCCACCCTCACCCAGTCGCACCCTGGAGGGGACATCAGCCCCAGCTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR TCA 90 bp CTTGCTGGCTCTTCCTGGGCCAGCTGCCAGAGGTATGCAGGCACCAGGATGCCTAAGTCCAGCTGGGGCTaGTGTCCCCTCCAGGGTGCG +
Preference number: 4 (lower is better)
Translates to: LAGSSWASCQRYAGTRMPKSSWG*CPLQGA
Trigger: CGCACCCTGGAGGGGACATCAGCCCCAGCTGGACTT...AGGCATCCTGGTGCCTGCATACCTCTGGCAGCTGGCCCAGGAAGAGCCAGCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR TCA 90 bp AGTCCAGCTGGGGCTGATGTCCCCTCCAGGGTGCGACTGGGTGAGGGTGGGCAGCCCGACCCTGGGGATTaGAAAACCAGGGCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: SPAGADVPSRVRLGEGGQPDPGD*KTRAES
Trigger: ACTCTCAGCCCTGGTTTTTCAATCCCCAGGGTCGGG...CTGCCCACCCTCACCCAGTCGCACCCTGGAGGGGACATCAGCCCCAGCTGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR TCA 90 bp ACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCCAGCCCACAGGGCCTGCGCCACAGTaGGACCAGCTCTATGCAGAT +
Preference number: 4 (lower is better)
Translates to: TVQVARAGKRVEVWAQPTGPAPQ*DQLYAD
Trigger: ATCTGCATAGAGCTGGTCTCACTGTGGCGCAGGCCC...TGTGGGCTGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp ACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCCAGCCCACACCAGCAGGCAAGGGCTaGATGACTGGCTTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: TVQVARAGKRVEVWAQPTPAGKG*MTGLGS
Trigger: ACTGCCCAAGCCAGTCATGCAGCCCTTGCCTGCTGG...TGTGGGCTGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp ACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCCAGCCCACACCCATGCCTTGCTCTTaGTGGCTCTTCCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: TVQVARAGKRVEVWAQPTPMPCS*WLFLGQ
Trigger: CTGGCCCAGGAAGAGCCAGCAAGAGCAAGGCATGGG...TGTGGGCTGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp GGCCCAAGTCCAGCTGGGGCTGATGTCCCCTCCAGGGTGCGACTGGGTGAGGGTGGTGAGACAAGGTCCTaGCTGTCTCCCCATCCTCTG +
Preference number: 4 (lower is better)
Translates to: GPSPAGADVPSRVRLGEGGETRS*LSPHPL
Trigger: CAGAGGATGGGGAGACAGGCAGGACCTTGTCTCACC...ACCCTCACCCAGTCGCACCCTGGAGGGGACATCAGCCCCAGCTGGACTTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp GAAAAACCAGGGCTGAGAGTGCCCATACAGTTCAGGTGGCCAGGGCAGGCAAGCGCTGGAGGGAACCAGTaGGCGCGGAGCGCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: EKPGLRVPIQFRWPGQASAGGNQ*ARSACW
Trigger: CCAGCACGCGCTCCGCGCCCACTGGTTCCCTCCAGC...GCTTGCCTGCCCTGGCCACCTGAACTGTATGGGCACTCTCAGCCCTGGTTTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp GTCCAGCTGGGGCTGATGTCCCCTCCAGGGTGCGACTGGGTGAGGGTGGGCAGACCAGGATGCGTGGCCTaGACAAGCAGTTGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: VQLGLMSPPGCDWVRVGRPGCVA*TSSWSP
Trigger: TGGACTCCAACTGCTTGTCCAGGCCACGCATCCTGG...TCTGCCCACCCTCACCCAGTCGCACCCTGGAGGGGACATCAGCCCCAGCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp GTCCAGCTGGGGCTGATGTCCCCTCCAGGGTGCGACTGGGTGAGGGTGGGCAGACTAGCAGAACTGCAGTaGCGGCCCTCAAACCAGCAC +
Preference number: 4 (lower is better)
Translates to: VQLGLMSPPGCDWVRVGRLAELQ*RPSNQH
Trigger: GTGCTGGTTTGAGGGCCGCCACTGCAGTTCTGCTAG...TCTGCCCACCCTCACCCAGTCGCACCCTGGAGGGGACATCAGCCCCAGCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR TCA 90 bp TGCCCATACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCCACAGGCAAGGGCTGCATaGCTGGCTTGGGCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: CPYSSGGQGRQASGGLGPQARAA*LAWAVP
Trigger: TGGAACTGCCCAAGCCAGTCATGCAGCCCTTGCCTG...TGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGTATGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR TCA 90 bp AGTCCAGCTGGGGCTGATGTCCCCTCCAGGGTGCGACTGGGTGAGGGTGGGCAGTACCTCCAAGTTGTGTaGCACCTCCCCTCTCCCATG +
Preference number: 4 (lower is better)
Translates to: SPAGADVPSRVRLGEGGQYLQVV*HLPSPM
Trigger: CATGGGAGAGGGGAGGTGTCACACAACTTGGAGGTA...CTGCCCACCCTCACCCAGTCGCACCCTGGAGGGGACATCAGCCCCAGCTGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR TCA 90 bp CCCCGGGGCCTGCGCCACAGTGAGACCAGCTCTATGCAGATACAGCTCTGTCCTGGGTTGGCTCGCCCCTaGCACCAACCCCAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: PRGLRHSETSSMQIQLCPGLARP*HQPQGE
Trigger: TTCTCCTTGGGGTTGGTGTCAGGGGCGAGCCAACCC...AGGACAGAGCTGTATCTGCATAGAGCTGGTCTCACTGTGGCGCAGGCCCCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR TCA 90 bp CCCCGGGGCCTGCGCCACAGTGAGACCAGCTCTATGCAGATACAGCTCTGTCCTTGTCCTGTGAGGGGGTaGGACACAGGCTCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PRGLRHSETSSMQIQLCPCPVRG*DTGSAG
Trigger: CCCAGCAGAGCCTGTGTCTCACCCCCTCACAGGACA...AGGACAGAGCTGTATCTGCATAGAGCTGGTCTCACTGTGGCGCAGGCCCCGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR TCA 90 bp CTGGCTCTTCCTGGGCCAGCTGCCAGAGGTATGCAGGCACCAGGATGCCTGGAGGGGCCTGCGCCACAGTaGGACCAGCTCTATGCAGAT +
Preference number: 4 (lower is better)
Translates to: LALPGPAARGMQAPGCLEGPAPQ*DQLYAD
Trigger: ATCTGCATAGAGCTGGTCTCACTGTGGCGCAGGCCC...CTCCAGGCATCCTGGTGCCTGCATACCTCTGGCAGCTGGCCCAGGAAGAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp GGAAGCAGACCTAGCAGAACTGCAGTGGCGGCCCTCAAACCAGCACCCCCTCTTGGCTGGGGTACCCTCTaGCACCTCCTCGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GSRPSRTAVAALKPAPPLGWGTL*HLLEEG
Trigger: GCCTTCCTCGAGGAGGTGGCAGAGGGTACCCCAGCC...AAGAGGGGGTGCTGGTTTGAGGGCCGCCACTGCAGTTCTGCTAGGTCTGCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp CCCCGGGGCCTGCGCCACAGTGAGACCAGCTCTATGCAGATACAGCTCTGTCCTGTGAGACACAGGCTCTaGTGGGGACTGAGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: PRGLRHSETSSMQIQLCPVRHRL*WGLRLR
Trigger: CCGGAGCCTCAGTCCCCAGCAGAGCCTGTGTCTCAC...AGGACAGAGCTGTATCTGCATAGAGCTGGTCTCACTGTGGCGCAGGCCCCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp TGTCGATCTCAGTTCCTCTGCATGTCATCCTCCCAGAAACAGAGGCTGGCTGCCCTGGACGGCGGCGGCTaGAGGGAACCAGTGGGCGCG +
Preference number: 4 (lower is better)
Translates to: CRSQFLCMSSSQKQRLAALDGGG*REPVGA
Trigger: CGCGCCCACTGGTTCCCTCCAGCCGCCGCCGTCCAG...GGCAGCCAGCCTCTGTTTCTGGGAGGATGACATGCAGAGGAACTGAGATCGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp CCATCCTCTGACACATGGCTCAGTATAATGAAGCCACATGCGGCCTGGGGGCATCTGGACGGCGGCGGCTaGAGGGAACCAGTGGGCGCG +
Preference number: 4 (lower is better)
Translates to: PSSDTWLSIMKPHAAWGHLDGGG*REPVGA
Trigger: CGCGCCCACTGGTTCCCTCCAGCCGCCGCCGTCCAG...ATGCCCCCAGGCCGCATGTGGCTTCATTATACTGAGCCATGTGTCAGAGGATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp ACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCCAGCCCACACAAGGGCTGCATGACTaGCTTGGGCAGTTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: TVQVARAGKRVEVWAQPTQGLHD*LGQFQG
Trigger: TCCCTGGAACTGCCCAAGCCAGTCATGCAGCCCTTG...TGTGGGCTGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp AGTCCAGCTGGGGCTGATGTCCCCTCCAGGGTGCGACTGGGTGAGGGTGGGCAGAAAGGCCAGGATGCGTaGCCTGGACAAGCAGTTGGA +
Preference number: 4 (lower is better)
Translates to: SPAGADVPSRVRLGEGGQKGQDA*PGQAVG
Trigger: TCCAACTGCTTGTCCAGGCCACGCATCCTGGCCTTT...CTGCCCACCCTCACCCAGTCGCACCCTGGAGGGGACATCAGCCCCAGCTGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp AGTCCAGCTGGGGCTGATGTCCCCTCCAGGGTGCGACTGGGTGAGGGTGGGCAGGGGGGCAGAAGAGAGTaGACACATTCACAGACGGGT +
Preference number: 4 (lower is better)
Translates to: SPAGADVPSRVRLGEGGQGGRRE*THSQTG
Trigger: ACCCGTCTGTGAATGTGTCCACTCTCTTCTGCCCCC...CTGCCCACCCTCACCCAGTCGCACCCTGGAGGGGACATCAGCCCCAGCTGGACT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR TCA 90 bp ACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCCAGCCCACATTTTCACTGACAGCGTaGACAGGTAGCTGGGGTGCG +
Preference number: 4 (lower is better)
Translates to: TVQVARAGKRVEVWAQPTFSLTA*TGSWGA
Trigger: CGCACCCCAGCTACCTGTTCACGCTGTCAGTGAAAA...TGTGGGCTGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR TCA 90 bp TGCCCATACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCCAAGTGCTGCACAAGGCTaGCCACATCCGGAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: CPYSSGGQGRQASGGLGPSAAQG*PHPERP
Trigger: TGGCCTTTCCGGATGTGGTCAGCCTTGTGCAGCACT...TGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGTATGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp CTTGCTGGCTCTTCCTGGGCCAGCTGCCAGAGGTATGCAGGCACCAGGATGCCTTGGAGGAGCAGGCAGTaGTGGGTCACTAGGCGCATC +
Preference number: 4 (lower is better)
Translates to: LAGSSWASCQRYAGTRMPWRSRQ*WVTRRI
Trigger: GATGCGCCTAGTGACCCAGCACTGCCTGCTCCTCCA...AGGCATCCTGGTGCCTGCATACCTCTGGCAGCTGGCCCAGGAAGAGCCAGCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp CTGGCTCTTCCTGGGCCAGCTGCCAGAGGTATGCAGGCACCAGGATGCCTGGAGACAGGTGTTGCAGGCTaGGGGCACTGCTTCTGCGTA +
Preference number: 4 (lower is better)
Translates to: LALPGPAARGMQAPGCLETGVAG*GHCFCV
Trigger: TACGCAGAAGCAGTGCCCGCAGCCTGCAACACCTGT...CTCCAGGCATCCTGGTGCCTGCATACCTCTGGCAGCTGGCCCAGGAAGAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp CTTGCTGGCTCTTCCTGGGCCAGCTGCCAGAGGTATGCAGGCACCAGGATGCCTCCCATGCCTTGCTCTTaGTGGCTCTTCCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LAGSSWASCQRYAGTRMPPMPCS*WLFLGQ
Trigger: CTGGCCCAGGAAGAGCCAGCAAGAGCAAGGCATGGG...AGGCATCCTGGTGCCTGCATACCTCTGGCAGCTGGCCCAGGAAGAGCCAGCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp TGCCCATACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCCAACCTCCCCTCTCCCATaGCTTGCTCTTGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: CPYSSGGQGRQASGGLGPTSPLP*LALAGS
Trigger: AGAGCCAGCAAGAGCAAGGCATGGGAGAGGGGAGGT...TGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGTATGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp CTGTCGATCTCAGTTCCTCTGCATGTCATCCTCCCAGAAACAGAGGCTGGCTGCGCTGGAGGGAACCAGTaGGCGCGGAGCGCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LSISVPLHVILPETEAGCAGGNQ*ARSACW
Trigger: CCAGCACGCGCTCCGCGCCCACTGGTTCCCTCCAGC...GCAGCCAGCCTCTGTTTCTGGGAGGATGACATGCAGAGGAACTGAGATCGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp TGCCCATACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCCATGGGTCCAGCACCTTTaGCTCACTCTCTGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: CPYSSGGQGRQASGGLGPWVQHL*LTLCLG
Trigger: GCCCAGACAGAGAGTGAGCCAAAGGTGCTGGACCCA...TGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGTATGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp CCCCGGGGCCTGCGCCACAGTGAGACCAGCTCTATGCAGATACAGCTCTGTCCTAGGAGCAGGCAGTGCTaGGTCACTAGGCGCATCCTC +
Preference number: 4 (lower is better)
Translates to: PRGLRHSETSSMQIQLCPRSRQC*VTRRIL
Trigger: GAGGATGCGCCTAGTGACCCAGCACTGCCTGCTCCT...AGGACAGAGCTGTATCTGCATAGAGCTGGTCTCACTGTGGCGCAGGCCCCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp CTTGCTGGCTCTTCCTGGGCCAGCTGCCAGAGGTATGCAGGCACCAGGATGCCTAGGAGCAGGCAGTGCTaGGTCACTAGGCGCATCCTC +
Preference number: 4 (lower is better)
Translates to: LAGSSWASCQRYAGTRMPRSRQC*VTRRIL
Trigger: GAGGATGCGCCTAGTGACCCAGCACTGCCTGCTCCT...AGGCATCCTGGTGCCTGCATACCTCTGGCAGCTGGCCCAGGAAGAGCCAGCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp TGTCGATCTCAGTTCCTCTGCATGTCATCCTCCCAGAAACAGAGGCTGGCTGCCCATGCGCCGGGGCAGTaGCAGGCAGTCCACGTCGGC +
Preference number: 4 (lower is better)
Translates to: CRSQFLCMSSSQKQRLAAHAPGQ*QAVHVG
Trigger: GCCGACGTGGACTGCCTGCCACTGCCCCGGCGCATG...GGCAGCCAGCCTCTGTTTCTGGGAGGATGACATGCAGAGGAACTGAGATCGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp TGCCCATACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCCACCGTACAGTCAGAGCTaGAAGGGGTACTGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: CPYSSGGQGRQASGGLGPPYSQS*KGYCRR
Trigger: CCTCCGACAGTACCCCTTCCAGCTCTGACTGTACGG...TGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGTATGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp CTGGCTCTTCCTGGGCCAGCTGCCAGAGGTATGCAGGCACCAGGATGCCTGGAGATGCCTTGCTCTTGCTaGCTCTTCCTGGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LALPGPAARGMQAPGCLEMPCSC*LFLGQL
Trigger: CAGCTGGCCCAGGAAGAGCCAGCAAGAGCAAGGCAT...CTCCAGGCATCCTGGTGCCTGCATACCTCTGGCAGCTGGCCCAGGAAGAGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp ACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCCAGCCCACAAAGCCACATGCGGCCTaGGGGCATTTACCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: TVQVARAGKRVEVWAQPTKPHAA*GHLPPS
Trigger: ACTTGGAGGTAAATGCCCCCAGGCCGCATGTGGCTT...TGTGGGCTGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp CTGGCTCTTCCTGGGCCAGCTGCCAGAGGTATGCAGGCACCAGGATGCCTGGAGCCCAGAAACAGAGGCTaGCTGCCAGTAGGGGTCCTA +
Preference number: 4 (lower is better)
Translates to: LALPGPAARGMQAPGCLEPRNRG*LPVGVL
Trigger: TAGGACCCCTACTGGCAGCCAGCCTCTGTTTCTGGG...CTCCAGGCATCCTGGTGCCTGCATACCTCTGGCAGCTGGCCCAGGAAGAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp CTTGCTGGCTCTTCCTGGGCCAGCTGCCAGAGGTATGCAGGCACCAGGATGCCTCAGAGTTGGGGTCTCTaGACTACCAGGGCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: LAGSSWASCQRYAGTRMPQSWGL*TTRAQG
Trigger: GCCCTGAGCCCTGGTAGTCCAGAGACCCCAACTCTG...AGGCATCCTGGTGCCTGCATACCTCTGGCAGCTGGCCCAGGAAGAGCCAGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp ACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCCAGCCCACACTCCCCAAATATGGCTaGGGGCAGAAGAGAGTGGAC +
Preference number: 4 (lower is better)
Translates to: TVQVARAGKRVEVWAQPTLPKYG*GQKRVD
Trigger: GTCCACTCTCTTCTGCCCCCAGCCATATTTGGGGAG...TGTGGGCTGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp GTCCAGCTGGGGCTGATGTCCCCTCCAGGGTGCGACTGGGTGAGGGTGGGCAGATCATGGTGGGGACAGTaGCTGGTGTGTTCTAGGTAC +
Preference number: 4 (lower is better)
Translates to: VQLGLMSPPGCDWVRVGRSWWGQ*LVCSRY
Trigger: GTACCTAGAACACACCAGCCACTGTCCCCACCATGA...TCTGCCCACCCTCACCCAGTCGCACCCTGGAGGGGACATCAGCCCCAGCTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443053.6
CDS-3UTR TCA 90 bp GAGTGGACACATTCACAGACGGGTGGGTCAGTACCAGGACATCCAGGATTGCCTCAGGGTGCGACTGGGTaGGGGTGGGCAGATTGCCCC +
Preference number: 4 (lower is better)
Translates to: EWTHSQTGGSVPGHPGLPQGATG*GWADCP
Trigger: GGGGCAATCTGCCCACCCTCACCCAGTCGCACCCTG...AGGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp GGAAGCAGACCTAGCAGAACTGCAGTGGCGGCCCTCAAACCAGCACCCCCTCTTCCAGCAGGCAAGGGCTaGATGACTGGCTTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: GSRPSRTAVAALKPAPPLPAGKG*MTGLGS
Trigger: ACTGCCCAAGCCAGTCATGCAGCCCTTGCCTGCTGG...AAGAGGGGGTGCTGGTTTGAGGGCCGCCACTGCAGTTCTGCTAGGTCTGCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp CTTGCTGGCTCTTCCTGGGCCAGCTGCCAGAGGTATGCAGGCACCAGGATGCCTTGCGGGCACTGCTTCTaGGTACAAAGGGCTGCACCA +
Preference number: 4 (lower is better)
Translates to: LAGSSWASCQRYAGTRMPCGHCF*VQRAAP
Trigger: TGGTGCAGCCCTTTGTACGCAGAAGCAGTGCCCGCA...AGGCATCCTGGTGCCTGCATACCTCTGGCAGCTGGCCCAGGAAGAGCCAGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp AGTCCAGCTGGGGCTGATGTCCCCTCCAGGGTGCGACTGGGTGAGGGTGGGCAGCAGGACATCCAGGATTaGCTTGGTTCCAGCAAGATG +
Preference number: 4 (lower is better)
Translates to: SPAGADVPSRVRLGEGGQQDIQD*LGSSKM
Trigger: CATCTTGCTGGAACCAAGGCAATCCTGGATGTCCTG...CTGCCCACCCTCACCCAGTCGCACCCTGGAGGGGACATCAGCCCCAGCTGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp CTGGCTCTTCCTGGGCCAGCTGCCAGAGGTATGCAGGCACCAGGATGCCTGGAGCTAGGTACATGTGTGTaGCCGCTTTGGAGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: LALPGPAARGMQAPGCLELGTCV*PLWSAA
Trigger: TGCTGCGCTCCAAAGCGGGCACACACATGTACCTAG...CTCCAGGCATCCTGGTGCCTGCATACCTCTGGCAGCTGGCCCAGGAAGAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443053.6
CDS-3UTR CCA 90 bp CCCCGGGGCCTGCGCCACAGTGAGACCAGCTCTATGCAGATACAGCTCTGTCCTCAAGGGCTGCATGACTaGCTTGGGCAGTTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PRGLRHSETSSMQIQLCPQGLHD*LGQFQG
Trigger: TCCCTGGAACTGCCCAAGCCAGTCATGCAGCCCTTG...AGGACAGAGCTGTATCTGCATAGAGCTGGTCTCACTGTGGCGCAGGCCCCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp CCCCGGGGCCTGCGCCACAGTGAGACCAGCTCTATGCAGATACAGCTCTGTCCTTGGGTCCAGCACCTTTaGCTCACTCTCTGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: PRGLRHSETSSMQIQLCPWVQHL*LTLCLG
Trigger: GCCCAGACAGAGAGTGAGCCAAAGGTGCTGGACCCA...AGGACAGAGCTGTATCTGCATAGAGCTGGTCTCACTGTGGCGCAGGCCCCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp TGCCCATACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCCAAAAGGCCAGGATGCGTaGCCTGGACAAGCAGTTGGA +
Preference number: 4 (lower is better)
Translates to: CPYSSGGQGRQASGGLGPKGQDA*PGQAVG
Trigger: TCCAACTGCTTGTCCAGGCCACGCATCCTGGCCTTT...TGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGTATGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp TGCCCATACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCCATTAGGTGTACAGCAGTaGCTGGTGGAGGAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: CPYSSGGQGRQASGGLGPLGVQQ*LVEEQA
Trigger: TGCCTGCTCCTCCACCAGCCACTGCTGTACACCTAA...TGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGTATGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp ACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCCAGCCCACAACATTCACAGACGGGTaGGTCAGTACCAGGACATCC +
Preference number: 4 (lower is better)
Translates to: TVQVARAGKRVEVWAQPTTFTDG*VSTRTS
Trigger: GGATGTCCTGGTACTGACCCACCCGTCTGTGAATGT...TGTGGGCTGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp TGCCCATACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCCAGGGGGCAGAAGAGAGTaGACACATTCACAGACGGGT +
Preference number: 4 (lower is better)
Translates to: CPYSSGGQGRQASGGLGPGGRRE*THSQTG
Trigger: ACCCGTCTGTGAATGTGTCCACTCTCTTCTGCCCCC...TGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGTATGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp GGAAGCAGACCTAGCAGAACTGCAGTGGCGGCCCTCAAACCAGCACCCCCTCTTCCTTCTGGCATCTTCTaGAGGTGTTGTCGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: GSRPSRTAVAALKPAPPLPSGIF*RCCRAS
Trigger: CGAGGCCCGACAACACCTGCAGAAGATGCCAGAAGG...AAGAGGGGGTGCTGGTTTGAGGGCCGCCACTGCAGTTCTGCTAGGTCTGCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp GAAAAACCAGGGCTGAGAGTGCCCATACAGTTCAGGTGGCCAGGGCAGGCAAGCTGGAGGAGCAGGCAGTaGTGGGTCACTAGGCGCATC +
Preference number: 4 (lower is better)
Translates to: EKPGLRVPIQFRWPGQASWRSRQ*WVTRRI
Trigger: GATGCGCCTAGTGACCCAGCACTGCCTGCTCCTCCA...GCTTGCCTGCCCTGGCCACCTGAACTGTATGGGCACTCTCAGCCCTGGTTTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp AGTCCAGCTGGGGCTGATGTCCCCTCCAGGGTGCGACTGGGTGAGGGTGGGCAGCTGCGTACAAAGGGCTaGACCAGTTTTAGGTGTACA +
Preference number: 4 (lower is better)
Translates to: SPAGADVPSRVRLGEGGQLRTKG*TSFRCT
Trigger: TGTACACCTAAAACTGGTGCAGCCCTTTGTACGCAG...CTGCCCACCCTCACCCAGTCGCACCCTGGAGGGGACATCAGCCCCAGCTGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp GGAAGCAGACCTAGCAGAACTGCAGTGGCGGCCCTCAAACCAGCACCCCCTCTTTGCGGGCACTGCTTCTaGGTACAAAGGGCTGCACCA +
Preference number: 4 (lower is better)
Translates to: GSRPSRTAVAALKPAPPLCGHCF*VQRAAP
Trigger: TGGTGCAGCCCTTTGTACGCAGAAGCAGTGCCCGCA...AAGAGGGGGTGCTGGTTTGAGGGCCGCCACTGCAGTTCTGCTAGGTCTGCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp GAAAAACCAGGGCTGAGAGTGCCCATACAGTTCAGGTGGCCAGGGCAGGCAAGCGCAGGCTGCGGGCACTaGTTCTGCGTACAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: EKPGLRVPIQFRWPGQASAGCGH*FCVQRA
Trigger: AGCCCTTTGTACGCAGAAGCAGTGCCCGCAGCCTGC...GCTTGCCTGCCCTGGCCACCTGAACTGTATGGGCACTCTCAGCCCTGGTTTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp CCATCCTCTGACACATGGCTCAGTATAATGAAGCCACATGCGGCCTGGGGGCATATGTCCCCTCCAGGGTaGGACTGGGTGAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: PSSDTWLSIMKPHAAWGHMSPPG*DWVRVG
Trigger: GCCCACCCTCACCCAGTCGCACCCTGGAGGGGACAT...ATGCCCCCAGGCCGCATGTGGCTTCATTATACTGAGCCATGTGTCAGAGGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp ACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCCAGCCCACAGTGAGACCAGCTCTATaGAGATACAGCTCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: TVQVARAGKRVEVWAQPTVRPAL*RYSSVL
Trigger: CAGGACAGAGCTGTATCTGCATAGAGCTGGTCTCAC...TGTGGGCTGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp AGAGTGGACACATTCACAGACGGGTGGGTCAGTACCAGGACATCCAGGATTGCCAGGCACCAGGATGCCTaGAGGAGGGACAGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: RVDTFTDGWVSTRTSRIARHQDA*RRDSGG
Trigger: GCCCCCACTGTCCCTCCTCCAGGCATCCTGGTGCCT...GGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp GGAAGCAGACCTAGCAGAACTGCAGTGGCGGCCCTCAAACCAGCACCCCCTCTTCCCAGAAACAGAGGCTaGCTGCCAGTAGGGGTCCTA +
Preference number: 4 (lower is better)
Translates to: GSRPSRTAVAALKPAPPLPRNRG*LPVGVL
Trigger: TAGGACCCCTACTGGCAGCCAGCCTCTGTTTCTGGG...AAGAGGGGGTGCTGGTTTGAGGGCCGCCACTGCAGTTCTGCTAGGTCTGCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp TGCCCATACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCCAAGAAGGTCTTGGCTATaGACAGCAGATCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: CPYSSGGQGRQASGGLGPRRSWL*TADPPL
Trigger: CAGAGGAGGATCTGCTGTGCATAGCCAAGACCTTCT...TGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGTATGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp CTTGCTGGCTCTTCCTGGGCCAGCTGCCAGAGGTATGCAGGCACCAGGATGCCTAGTCGGCATACTCAATaGGTACATTGGTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: LAGSSWASCQRYAGTRMPSRHTQ*VHWWGH
Trigger: GTGGCCCCACCAATGTACGCATTGAGTATGCCGACT...AGGCATCCTGGTGCCTGCATACCTCTGGCAGCTGGCCCAGGAAGAGCCAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp CTGTCGATCTCAGTTCCTCTGCATGTCATCCTCCCAGAAACAGAGGCTGGCTGCAGGCGGCACAGGTGTTaGAGGCTGCGGGCACTGCTT +
Preference number: 4 (lower is better)
Translates to: LSISVPLHVILPETEAGCRRHRC*RLRALL
Trigger: AAGCAGTGCCCGCAGCCTGCAACACCTGTGCCGCCT...GCAGCCAGCCTCTGTTTCTGGGAGGATGACATGCAGAGGAACTGAGATCGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp AGAGTGGACACATTCACAGACGGGTGGGTCAGTACCAGGACATCCAGGATTGCCAGGCGGCACAGGTGTTaGAGGCTGCGGGCACTGCTT +
Preference number: 4 (lower is better)
Translates to: RVDTFTDGWVSTRTSRIARRHRC*RLRALL
Trigger: AAGCAGTGCCCGCAGCCTGCAACACCTGTGCCGCCT...GGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp CTGGCTCTTCCTGGGCCAGCTGCCAGAGGTATGCAGGCACCAGGATGCCTGGAGTATAATGAAGCCACATaGGGCCTGGGGGCATTTACC +
Preference number: 4 (lower is better)
Translates to: LALPGPAARGMQAPGCLEYNEAT*GLGAFT
Trigger: GGTAAATGCCCCCAGGCCGCATGTGGCTTCATTATA...CTCCAGGCATCCTGGTGCCTGCATACCTCTGGCAGCTGGCCCAGGAAGAGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp AGAGTGGACACATTCACAGACGGGTGGGTCAGTACCAGGACATCCAGGATTGCCGGCTCACTCTCTGTCTaGGCTGGGGTACCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: RVDTFTDGWVSTRTSRIAGSLSV*AGVPSA
Trigger: GGCAGAGGGTACCCCAGCCCAGACAGAGAGTGAGCC...GGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp TGCCCATACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCCAGGTAGGAGAAGGTCTTaGCTATGCACAGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: CPYSSGGQGRQASGGLGPGRRRS*LCTADP
Trigger: AGGATCTGCTGTGCATAGCCAAGACCTTCTCCTACC...TGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGTATGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp TGCCCATACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCCACAATGCGTACATTGGTaGGGCCACGAGTGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: CPYSSGGQGRQASGGLGPQCVHW*GHEWFS
Trigger: TGAAAACCACTCGTGGCCCCACCAATGTACGCATTG...TGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGTATGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp GAAAAACCAGGGCTGAGAGTGCCCATACAGTTCAGGTGGCCAGGGCAGGCAAGCTGCAGTCCCCTAGCCTaGCTTACCCCTCAACAAGGG +
Preference number: 4 (lower is better)
Translates to: EKPGLRVPIQFRWPGQASCSPLA*LTPQQG
Trigger: CCCTTGTTGAGGGGTAAGCCAGGCTAGGGGACTGCA...GCTTGCCTGCCCTGGCCACCTGAACTGTATGGGCACTCTCAGCCCTGGTTTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR TCA 90 bp AGAGTGGACACATTCACAGACGGGTGGGTCAGTACCAGGACATCCAGGATTGCCCAGGCAAGGGCTGCATaGCTGGCTTGGGCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: RVDTFTDGWVSTRTSRIAQARAA*LAWAVP
Trigger: TGGAACTGCCCAAGCCAGTCATGCAGCCCTTGCCTG...GGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp TGCCCATACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCCACACGTACTAAGAACGTaGCTTCTGGCATCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: CPYSSGGQGRQASGGLGPHVLRT*LLASSA
Trigger: TGCAGAAGATGCCAGAAGGCACGTTCTTAGTACGTG...TGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGTATGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp GGAAGCAGACCTAGCAGAACTGCAGTGGCGGCCCTCAAACCAGCACCCCCTCTTAGTCGGCATACTCAATaGGTACATTGGTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: GSRPSRTAVAALKPAPPLSRHTQ*VHWWGH
Trigger: GTGGCCCCACCAATGTACGCATTGAGTATGCCGACT...AAGAGGGGGTGCTGGTTTGAGGGCCGCCACTGCAGTTCTGCTAGGTCTGCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp TGTCGATCTCAGTTCCTCTGCATGTCATCCTCCCAGAAACAGAGGCTGGCTGCCCCGGAAAGGCCAGGATaGGTGGCCTGGACAAGCAGT +
Preference number: 4 (lower is better)
Translates to: CRSQFLCMSSSQKQRLAAPERPG*VAWTSS
Trigger: ACTGCTTGTCCAGGCCACGCATCCTGGCCTTTCCGG...GGCAGCCAGCCTCTGTTTCTGGGAGGATGACATGCAGAGGAACTGAGATCGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp CTGTCGATCTCAGTTCCTCTGCATGTCATCCTCCCAGAAACAGAGGCTGGCTGCCCGGAAAGGCCAGGATaGGTGGCCTGGACAAGCAGT +
Preference number: 4 (lower is better)
Translates to: LSISVPLHVILPETEAGCPERPG*VAWTSS
Trigger: ACTGCTTGTCCAGGCCACGCATCCTGGCCTTTCCGG...GCAGCCAGCCTCTGTTTCTGGGAGGATGACATGCAGAGGAACTGAGATCGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp CCATCCTCTGACACATGGCTCAGTATAATGAAGCCACATGCGGCCTGGGGGCATGCAGGCTGCGGGCACTaGTTCTGCGTACAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: PSSDTWLSIMKPHAAWGHAGCGH*FCVQRA
Trigger: AGCCCTTTGTACGCAGAAGCAGTGCCCGCAGCCTGC...ATGCCCCCAGGCCGCATGTGGCTTCATTATACTGAGCCATGTGTCAGAGGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp AGAGTGGACACATTCACAGACGGGTGGGTCAGTACCAGGACATCCAGGATTGCCTCTTCCTGGGCCAGCTaGCAGAGGTATGCAGGCACC +
Preference number: 4 (lower is better)
Translates to: RVDTFTDGWVSTRTSRIASSWAS*QRYAGT
Trigger: GGTGCCTGCATACCTCTGGCAGCTGGCCCAGGAAGA...GGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp CCCCGGGGCCTGCGCCACAGTGAGACCAGCTCTATGCAGATACAGCTCTGTCCTCAGGACATCCAGGATTaGCTTGGTTCCAGCAAGATG +
Preference number: 4 (lower is better)
Translates to: PRGLRHSETSSMQIQLCPQDIQD*LGSSKM
Trigger: CATCTTGCTGGAACCAAGGCAATCCTGGATGTCCTG...AGGACAGAGCTGTATCTGCATAGAGCTGGTCTCACTGTGGCGCAGGCCCCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp TGGTTCCAGCAAGATGTCTCAGGATGGGCTTTCCACAGGGAAGAACCAGAGAAGAGGCACCAGGATGCCTaGAGGAGGGACAGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: WFQQDVSGWAFHREEPEKRHQDA*RRDSGG
Trigger: GCCCCCACTGTCCCTCCTCCAGGCATCCTGGTGCCT...CTTCTCTGGTTCTTCCCTGTGGAAAGCCCATCCTGAGACATCTTGCTGGAACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp CTGTCGATCTCAGTTCCTCTGCATGTCATCCTCCCAGAAACAGAGGCTGGCTGCCCCATACAGTTCAGGTaGCCAGGGCAGGCAAGCGAG +
Preference number: 4 (lower is better)
Translates to: LSISVPLHVILPETEAGCPIQFR*PGQASE
Trigger: CTCGCTTGCCTGCCCTGGCCACCTGAACTGTATGGG...GCAGCCAGCCTCTGTTTCTGGGAGGATGACATGCAGAGGAACTGAGATCGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp AGAGTGGACACATTCACAGACGGGTGGGTCAGTACCAGGACATCCAGGATTGCCGCAAAGGACGAGGTCTaGGCAGGGGTGTGTCCATGG +
Preference number: 4 (lower is better)
Translates to: RVDTFTDGWVSTRTSRIAAKDEV*AGVCPW
Trigger: CCATGGACACACCCCTGCCCAGACCTCGTCCTTTGC...GGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443053.6
CDS-3UTR TCA 90 bp AGAGTGGACACATTCACAGACGGGTGGGTCAGTACCAGGACATCCAGGATTGCCAAAGGACGAGGTCCCTaGACGCAGAGGACCATGTCC +
Preference number: 4 (lower is better)
Translates to: RVDTFTDGWVSTRTSRIAKGRGP*TQRTMS
Trigger: GGACATGGTCCTCTGCGTTCAGGGACCTCGTCCTTT...GGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348721.4
CDS-3UTR TCA 90 bp TGTCGATCTCAGTTCCTCTGCATGTCATCCTCCCAGAAACAGAGGCTGGCTGCCAGTGCTGCACAAGGCTaGCCACATCCGGAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: CRSQFLCMSSSQKQRLAASAAQG*PHPERP
Trigger: TGGCCTTTCCGGATGTGGTCAGCCTTGTGCAGCACT...GGCAGCCAGCCTCTGTTTCTGGGAGGATGACATGCAGAGGAACTGAGATCGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR TCA 90 bp CTGTCGATCTCAGTTCCTCTGCATGTCATCCTCCCAGAAACAGAGGCTGGCTGCCCCGACCCTGGGGATTaGAAAACCAGGGCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: LSISVPLHVILPETEAGCPDPGD*KTRAES
Trigger: ACTCTCAGCCCTGGTTTTTCAATCCCCAGGGTCGGG...GCAGCCAGCCTCTGTTTCTGGGAGGATGACATGCAGAGGAACTGAGATCGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR TCA 90 bp TGGTTCCAGCAAGATGTCTCAGGATGGGCTTTCCACAGGGAAGAACCAGAGAAGTGTCCTGTGAGGGGGTaGGACACAGGCTCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: WFQQDVSGWAFHREEPEKCPVRG*DTGSAG
Trigger: CCCAGCAGAGCCTGTGTCTCACCCCCTCACAGGACA...CTTCTCTGGTTCTTCCCTGTGGAAAGCCCATCCTGAGACATCTTGCTGGAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp GAGTGGACACATTCACAGACGGGTGGGTCAGTACCAGGACATCCAGGATTGCCTCCTTCTGGCATCTTCTaGAGGTGTTGTCGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: EWTHSQTGGSVPGHPGLPPSGIF*RCCRAS
Trigger: CGAGGCCCGACAACACCTGCAGAAGATGCCAGAAGG...AGGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp GAGTGGACACATTCACAGACGGGTGGGTCAGTACCAGGACATCCAGGATTGCCTACCTCCCCTCTCCCATaGCTTGCTCTTGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: EWTHSQTGGSVPGHPGLPTSPLP*LALAGS
Trigger: AGAGCCAGCAAGAGCAAGGCATGGGAGAGGGGAGGT...AGGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp TTGTCCATCCTCCCCAAATATGGCTGGGGGCAGAAGAGAGTGGACACATTCACAGTGAGACACAGGCTCTaGTGGGGACTGAGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: LSILPKYGWGQKRVDTFTVRHRL*WGLRLR
Trigger: CCGGAGCCTCAGTCCCCAGCAGAGCCTGTGTCTCAC...TGTGAATGTGTCCACTCTCTTCTGCCCCCAGCCATATTTGGGGAGGATGGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp GGAAGCAGACCTAGCAGAACTGCAGTGGCGGCCCTCAAACCAGCACCCCCTCTTACTCAATGCGTACATTaGTGGGGCCACGAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: GSRPSRTAVAALKPAPPLTQCVH*WGHEWF
Trigger: AAACCACTCGTGGCCCCACCAATGTACGCATTGAGT...AAGAGGGGGTGCTGGTTTGAGGGCCGCCACTGCAGTTCTGCTAGGTCTGCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp AGAGTGGACACATTCACAGACGGGTGGGTCAGTACCAGGACATCCAGGATTGCCCCAGGATGCGTGGCCTaGACAAGCAGTTGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: RVDTFTDGWVSTRTSRIAPGCVA*TSSWSP
Trigger: TGGACTCCAACTGCTTGTCCAGGCCACGCATCCTGG...GGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp CTGTCGATCTCAGTTCCTCTGCATGTCATCCTCCCAGAAACAGAGGCTGGCTGCATGCCTTGCTCTTGCTaGCTCTTCCTGGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LSISVPLHVILPETEAGCMPCSC*LFLGQL
Trigger: CAGCTGGCCCAGGAAGAGCCAGCAAGAGCAAGGCAT...GCAGCCAGCCTCTGTTTCTGGGAGGATGACATGCAGAGGAACTGAGATCGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp TGTCGATCTCAGTTCCTCTGCATGTCATCCTCCCAGAAACAGAGGCTGGCTGCCGGTCCTACCCGACCCTaGGGATTGAAAAACCAGGGC +
Preference number: 4 (lower is better)
Translates to: CRSQFLCMSSSQKQRLAAGPTRP*GLKNQG
Trigger: GCCCTGGTTTTTCAATCCCCAGGGTCGGGTAGGACC...GGCAGCCAGCCTCTGTTTCTGGGAGGATGACATGCAGAGGAACTGAGATCGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp GAAAAACCAGGGCTGAGAGTGCCCATACAGTTCAGGTGGCCAGGGCAGGCAAGCACATTCACAGACGGGTaGGTCAGTACCAGGACATCC +
Preference number: 4 (lower is better)
Translates to: EKPGLRVPIQFRWPGQASTFTDG*VSTRTS
Trigger: GGATGTCCTGGTACTGACCCACCCGTCTGTGAATGT...GCTTGCCTGCCCTGGCCACCTGAACTGTATGGGCACTCTCAGCCCTGGTTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp CCATCCTCTGACACATGGCTCAGTATAATGAAGCCACATGCGGCCTGGGGGCATCTAGCAGAACTGCAGTaGCGGCCCTCAAACCAGCAC +
Preference number: 4 (lower is better)
Translates to: PSSDTWLSIMKPHAAWGHLAELQ*RPSNQH
Trigger: GTGCTGGTTTGAGGGCCGCCACTGCAGTTCTGCTAG...ATGCCCCCAGGCCGCATGTGGCTTCATTATACTGAGCCATGTGTCAGAGGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp CTGTCGATCTCAGTTCCTCTGCATGTCATCCTCCCAGAAACAGAGGCTGGCTGCGGTAGCTGGGGTGCGTaGTGTCACGTACTAAGAACG +
Preference number: 4 (lower is better)
Translates to: LSISVPLHVILPETEAGCGSWGA*CHVLRT
Trigger: CGTTCTTAGTACGTGACAGCACGCACCCCAGCTACC...GCAGCCAGCCTCTGTTTCTGGGAGGATGACATGCAGAGGAACTGAGATCGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp AGAGTGGACACATTCACAGACGGGTGGGTCAGTACCAGGACATCCAGGATTGCCGGTAGCTGGGGTGCGTaGTGTCACGTACTAAGAACG +
Preference number: 4 (lower is better)
Translates to: RVDTFTDGWVSTRTSRIAGSWGA*CHVLRT
Trigger: CGTTCTTAGTACGTGACAGCACGCACCCCAGCTACC...GGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp TGGTTCCAGCAAGATGTCTCAGGATGGGCTTTCCACAGGGAAGAACCAGAGAAGCAGCTGCCAGAGGTATaGAGGCACCAGGATGCCTGG +
Preference number: 4 (lower is better)
Translates to: WFQQDVSGWAFHREEPEKQLPEV*RHQDAW
Trigger: CCAGGCATCCTGGTGCCTGCATACCTCTGGCAGCTG...CTTCTCTGGTTCTTCCCTGTGGAAAGCCCATCCTGAGACATCTTGCTGGAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp GAAAAACCAGGGCTGAGAGTGCCCATACAGTTCAGGTGGCCAGGGCAGGCAAGCGTGAGACCAGCTCTATaGAGATACAGCTCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: EKPGLRVPIQFRWPGQASVRPAL*RYSSVL
Trigger: CAGGACAGAGCTGTATCTGCATAGAGCTGGTCTCAC...GCTTGCCTGCCCTGGCCACCTGAACTGTATGGGCACTCTCAGCCCTGGTTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp AGAGTGGACACATTCACAGACGGGTGGGTCAGTACCAGGACATCCAGGATTGCCAAGCCACATGCGGCCTaGGGGCATTTACCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: RVDTFTDGWVSTRTSRIAKPHAA*GHLPPS
Trigger: ACTTGGAGGTAAATGCCCCCAGGCCGCATGTGGCTT...GGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp TGGTTCCAGCAAGATGTCTCAGGATGGGCTTTCCACAGGGAAGAACCAGAGAAGCAGAGTTGGGGTCTCTaGACTACCAGGGCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: WFQQDVSGWAFHREEPEKQSWGL*TTRAQG
Trigger: GCCCTGAGCCCTGGTAGTCCAGAGACCCCAACTCTG...CTTCTCTGGTTCTTCCCTGTGGAAAGCCCATCCTGAGACATCTTGCTGGAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp CTGTCGATCTCAGTTCCTCTGCATGTCATCCTCCCAGAAACAGAGGCTGGCTGCCTCCCCAAATATGGCTaGGGGCAGAAGAGAGTGGAC +
Preference number: 4 (lower is better)
Translates to: LSISVPLHVILPETEAGCLPKYG*GQKRVD
Trigger: GTCCACTCTCTTCTGCCCCCAGCCATATTTGGGGAG...GCAGCCAGCCTCTGTTTCTGGGAGGATGACATGCAGAGGAACTGAGATCGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
3UTR CAA 72 bp GACGGGTGGGTCAGTACCAGGACATCCAGGATTGCCTaGGTTCCAGCAAGATGTCTCAGGATGGGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: DGWVSTRTSRIA*VPARCLRMGFP
Trigger: TGGAAAGCCCATCCTGAGACATCTTGCTGGAACCAAGGCAATCCTGGATGTCCTGGTACTGACCCACCCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp AGAGTGGACACATTCACAGACGGGTGGGTCAGTACCAGGACATCCAGGATTGCCTTCGGGTATCAGCAGTaGAGGAGGCCACATAGTGCT +
Preference number: 4 (lower is better)
Translates to: RVDTFTDGWVSTRTSRIAFGYQQ*RRPHSA
Trigger: AGCACTATGTGGCCTCCTGCACTGCTGATACCCGAA...GGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp TGTCGATCTCAGTTCCTCTGCATGTCATCCTCCCAGAAACAGAGGCTGGCTGCCAGTCCAGACGGAAGCTaGAGTCGGCATACTCAATGC +
Preference number: 4 (lower is better)
Translates to: CRSQFLCMSSSQKQRLAASPDGS*SRHTQC
Trigger: GCATTGAGTATGCCGACTCCAGCTTCCGTCTGGACT...GGCAGCCAGCCTCTGTTTCTGGGAGGATGACATGCAGAGGAACTGAGATCGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp TTGTCCATCCTCCCCAAATATGGCTGGGGGCAGAAGAGAGTGGACACATTCACAGCCTGGACAAGCAGTTaGAGTCCAGACGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: LSILPKYGWGQKRVDTFTAWTSS*SPDGSW
Trigger: CCAGCTTCCGTCTGGACTCCAACTGCTTGTCCAGGC...TGTGAATGTGTCCACTCTCTTCTGCCCCCAGCCATATTTGGGGAGGATGGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp TGGTTCCAGCAAGATGTCTCAGGATGGGCTTTCCACAGGGAAGAACCAGAGAAGGCCTGGACAAGCAGTTaGAGTCCAGACGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: WFQQDVSGWAFHREEPEKAWTSS*SPDGSW
Trigger: CCAGCTTCCGTCTGGACTCCAACTGCTTGTCCAGGC...CTTCTCTGGTTCTTCCCTGTGGAAAGCCCATCCTGAGACATCTTGCTGGAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp TGGTTCCAGCAAGATGTCTCAGGATGGGCTTTCCACAGGGAAGAACCAGAGAAGCCGTACAGTCAGAGCTaGAAGGGGTACTGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: WFQQDVSGWAFHREEPEKPYSQS*KGYCRR
Trigger: CCTCCGACAGTACCCCTTCCAGCTCTGACTGTACGG...CTTCTCTGGTTCTTCCCTGTGGAAAGCCCATCCTGAGACATCTTGCTGGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp TTGTCCATCCTCCCCAAATATGGCTGGGGGCAGAAGAGAGTGGACACATTCACACTTGCTGGCTCTTCCTaGGCCAGCTGCCAGAGGTAT +
Preference number: 4 (lower is better)
Translates to: LSILPKYGWGQKRVDTFTLAGSS*ASCQRY
Trigger: ATACCTCTGGCAGCTGGCCCAGGAAGAGCCAGCAAG...TGTGAATGTGTCCACTCTCTTCTGCCCCCAGCCATATTTGGGGAGGATGGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp GGAAGCAGACCTAGCAGAACTGCAGTGGCGGCCCTCAAACCAGCACCCCCTCTTCCATCCTCTGACACATaGCTCAGTATAATGAAGCCA +
Preference number: 4 (lower is better)
Translates to: GSRPSRTAVAALKPAPPLPSSDT*LSIMKP
Trigger: TGGCTTCATTATACTGAGCCATGTGTCAGAGGATGG...AAGAGGGGGTGCTGGTTTGAGGGCCGCCACTGCAGTTCTGCTAGGTCTGCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp TTGTCCATCCTCCCCAAATATGGCTGGGGGCAGAAGAGAGTGGACACATTCACATGCAGTCCCCTAGCCTaGCTTACCCCTCAACAAGGG +
Preference number: 4 (lower is better)
Translates to: LSILPKYGWGQKRVDTFTCSPLA*LTPQQG
Trigger: CCCTTGTTGAGGGGTAAGCCAGGCTAGGGGACTGCA...TGTGAATGTGTCCACTCTCTTCTGCCCCCAGCCATATTTGGGGAGGATGGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR TCA 90 bp TGGTTCCAGCAAGATGTCTCAGGATGGGCTTTCCACAGGGAAGAACCAGAGAAGTTTTCACTGACAGCGTaGACAGGTAGCTGGGGTGCG +
Preference number: 4 (lower is better)
Translates to: WFQQDVSGWAFHREEPEKFSLTA*TGSWGA
Trigger: CGCACCCCAGCTACCTGTTCACGCTGTCAGTGAAAA...CTTCTCTGGTTCTTCCCTGTGGAAAGCCCATCCTGAGACATCTTGCTGGAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR TCA 90 bp CCATCCTCTGACACATGGCTCAGTATAATGAAGCCACATGCGGCCTGGGGGCATACGAGTGGTTTTCACTaGCAGCGTGAACAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: PSSDTWLSIMKPHAAWGHTSGFH*QREQVA
Trigger: AGCTACCTGTTCACGCTGTCAGTGAAAACCACTCGT...ATGCCCCCAGGCCGCATGTGGCTTCATTATACTGAGCCATGTGTCAGAGGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR TCA 90 bp AGAGTGGACACATTCACAGACGGGTGGGTCAGTACCAGGACATCCAGGATTGCCACGAGTGGTTTTCACTaGCAGCGTGAACAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: RVDTFTDGWVSTRTSRIATSGFH*QREQVA
Trigger: AGCTACCTGTTCACGCTGTCAGTGAAAACCACTCGT...GGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp CCATCCTCTGACACATGGCTCAGTATAATGAAGCCACATGCGGCCTGGGGGCATAGAAGGTCTTGGCTATaGACAGCAGATCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PSSDTWLSIMKPHAAWGHRRSWL*TADPPL
Trigger: CAGAGGAGGATCTGCTGTGCATAGCCAAGACCTTCT...ATGCCCCCAGGCCGCATGTGGCTTCATTATACTGAGCCATGTGTCAGAGGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp GAGTGGACACATTCACAGACGGGTGGGTCAGTACCAGGACATCCAGGATTGCCTTATAATGAAGCCACATaGGGCCTGGGGGCATTTACC +
Preference number: 4 (lower is better)
Translates to: EWTHSQTGGSVPGHPGLPYNEAT*GLGAFT
Trigger: GGTAAATGCCCCCAGGCCGCATGTGGCTTCATTATA...AGGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp GAGTGGACACATTCACAGACGGGTGGGTCAGTACCAGGACATCCAGGATTGCCTCAATGCGTACATTGGTaGGGCCACGAGTGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: EWTHSQTGGSVPGHPGLPQCVHW*GHEWFS
Trigger: TGAAAACCACTCGTGGCCCCACCAATGTACGCATTG...AGGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp CCATCCTCTGACACATGGCTCAGTATAATGAAGCCACATGCGGCCTGGGGGCATACTCAATGCGTACATTaGTGGGGCCACGAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: PSSDTWLSIMKPHAAWGHTQCVH*WGHEWF
Trigger: AAACCACTCGTGGCCCCACCAATGTACGCATTGAGT...ATGCCCCCAGGCCGCATGTGGCTTCATTATACTGAGCCATGTGTCAGAGGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp TTGTCCATCCTCCCCAAATATGGCTGGGGGCAGAAGAGAGTGGACACATTCACAGCTGTGTCATCATCATaGTGGGGACAGTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LSILPKYGWGQKRVDTFTAVSSS*WGQWLV
Trigger: CACCAGCCACTGTCCCCACCATGATGATGACACAGC...TGTGAATGTGTCCACTCTCTTCTGCCCCCAGCCATATTTGGGGAGGATGGACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443053.6
CDS-3UTR TCA 90 bp CTGTCGATCTCAGTTCCTCTGCATGTCATCCTCCCAGAAACAGAGGCTGGCTGCTTGAAAAACCAGGGCTaGGAGTGCCCATACAGTTCA +
Preference number: 4 (lower is better)
Translates to: LSISVPLHVILPETEAGCLKNQG*ECPYSS
Trigger: TGAACTGTATGGGCACTCTCAGCCCTGGTTTTTCAA...GCAGCCAGCCTCTGTTTCTGGGAGGATGACATGCAGAGGAACTGAGATCGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp TGTCGATCTCAGTTCCTCTGCATGTCATCCTCCCAGAAACAGAGGCTGGCTGCCCACGTACTAAGAACGTaGCTTCTGGCATCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: CRSQFLCMSSSQKQRLAAHVLRT*LLASSA
Trigger: TGCAGAAGATGCCAGAAGGCACGTTCTTAGTACGTG...GGCAGCCAGCCTCTGTTTCTGGGAGGATGACATGCAGAGGAACTGAGATCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp TTGTCCATCCTCCCCAAATATGGCTGGGGGCAGAAGAGAGTGGACACATTCACATTCGGGTATCAGCAGTaGAGGAGGCCACATAGTGCT +
Preference number: 4 (lower is better)
Translates to: LSILPKYGWGQKRVDTFTFGYQQ*RRPHSA
Trigger: AGCACTATGTGGCCTCCTGCACTGCTGATACCCGAA...TGTGAATGTGTCCACTCTCTTCTGCCCCCAGCCATATTTGGGGAGGATGGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp TGTCGATCTCAGTTCCTCTGCATGTCATCCTCCCAGAAACAGAGGCTGGCTGCCCTGCGTACAAAGGGCTaGACCAGTTTTAGGTGTACA +
Preference number: 4 (lower is better)
Translates to: CRSQFLCMSSSQKQRLAALRTKG*TSFRCT
Trigger: TGTACACCTAAAACTGGTGCAGCCCTTTGTACGCAG...GGCAGCCAGCCTCTGTTTCTGGGAGGATGACATGCAGAGGAACTGAGATCGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp TGTCGATCTCAGTTCCTCTGCATGTCATCCTCCCAGAAACAGAGGCTGGCTGCCCAAGATGTCTCAGGATaGGCTTTCCACAGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: CRSQFLCMSSSQKQRLAAQDVSG*AFHREE
Trigger: TTCTTCCCTGTGGAAAGCCCATCCTGAGACATCTTG...GGCAGCCAGCCTCTGTTTCTGGGAGGATGACATGCAGAGGAACTGAGATCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp CCATCCTCTGACACATGGCTCAGTATAATGAAGCCACATGCGGCCTGGGGGCATCAAGATGTCTCAGGATaGGCTTTCCACAGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: PSSDTWLSIMKPHAAWGHQDVSG*AFHREE
Trigger: TTCTTCCCTGTGGAAAGCCCATCCTGAGACATCTTG...ATGCCCCCAGGCCGCATGTGGCTTCATTATACTGAGCCATGTGTCAGAGGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp TTGTCCATCCTCCCCAAATATGGCTGGGGGCAGAAGAGAGTGGACACATTCACAGGTGGGGACAGTGGCTaGTGTGTTCTAGGTACATGT +
Preference number: 4 (lower is better)
Translates to: LSILPKYGWGQKRVDTFTGGDSG*CVLGTC
Trigger: ACATGTACCTAGAACACACCAGCCACTGTCCCCACC...TGTGAATGTGTCCACTCTCTTCTGCCCCCAGCCATATTTGGGGAGGATGGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443053.6
CDS-3UTR CCA 90 bp TGGTTCCAGCAAGATGTCTCAGGATGGGCTTTCCACAGGGAAGAACCAGAGAAGGCAGGGGTGTGTCCATaGCTGTGTCATCATCATGGT +
Preference number: 4 (lower is better)
Translates to: WFQQDVSGWAFHREEPEKAGVCP*LCHHHG
Trigger: ACCATGATGATGACACAGCCATGGACACACCCCTGC...CTTCTCTGGTTCTTCCCTGTGGAAAGCCCATCCTGAGACATCTTGCTGGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443053.6
CDS-3UTR CCA 90 bp TTGTCCATCCTCCCCAAATATGGCTGGGGGCAGAAGAGAGTGGACACATTCACAGGTAGGAGAAGGTCTTaGCTATGCACAGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: LSILPKYGWGQKRVDTFTGRRRS*LCTADP
Trigger: AGGATCTGCTGTGCATAGCCAAGACCTTCTCCTACC...TGTGAATGTGTCCACTCTCTTCTGCCCCCAGCCATATTTGGGGAGGATGGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CCA 90 bp CCATCCTCTGACACATGGCTCAGTATAATGAAGCCACATGCGGCCTGGGGGCATCCATCCTCTGACACATaGCTCAGTATAATGAAGCCA +
Preference number: 4 (lower is better)
Translates to: PSSDTWLSIMKPHAAWGHPSSDT*LSIMKP
Trigger: TGGCTTCATTATACTGAGCCATGTGTCAGAGGATGG...ATGCCCCCAGGCCGCATGTGGCTTCATTATACTGAGCCATGTGTCAGAGGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp TTGTCCATCCTCCCCAAATATGGCTGGGGGCAGAAGAGAGTGGACACATTCACACGATCTCAGTTCCTCTaGATGTCATCCTCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: LSILPKYGWGQKRVDTFTRSQFL*MSSSQK
Trigger: TTTCTGGGAGGATGACATGCAGAGGAACTGAGATCG...TGTGAATGTGTCCACTCTCTTCTGCCCCCAGCCATATTTGGGGAGGATGGACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR GCA 90 bp TGGTTCCAGCAAGATGTCTCAGGATGGGCTTTCCACAGGGAAGAACCAGAGAAGCGATCTCAGTTCCTCTaGATGTCATCCTCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: WFQQDVSGWAFHREEPEKRSQFL*MSSSQK
Trigger: TTTCTGGGAGGATGACATGCAGAGGAACTGAGATCG...CTTCTCTGGTTCTTCCCTGTGGAAAGCCCATCCTGAGACATCTTGCTGGAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS CCA 90 bp GGCAGCGGCGACTCCGGAGTGGGGACTCGGCTGGACGGCGGCGGCTaGAGGGAACCAGTGGGCGCGGAGCGCGTGCTGGGTAGGCTCCCG +
Preference number: 5 (lower is better)
Translates to: GSGDSGVGTRLDGGG*REPVGAERVLGRLP
Trigger: CGGGAGCCTACCCAGCACGCGCTCCGCGCCCACTGGTTCCCTCCAGCCGCCGCCGTCCAGCCGAGTCCCCACTCCGGAGTCGCCGCTGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS CCA 90 bp GACCATGTCCCCGCGGCAGCGGCGACTCCGGAGTGGGGACTCGGCTaGACGGCGGCGGCTGGAGGGAACCAGTGGGCGCGGAGCGCGTGC +
Preference number: 5 (lower is better)
Translates to: DHVPAAAATPEWGLG*TAAAGGNQWARSAC
Trigger: GCACGCGCTCCGCGCCCACTGGTTCCCTCCAGCCGCCGCCGTCCAGCCGAGTCCCCACTCCGGAGTCGCCGCTGCCGCGGGGACATGGTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS GCA 90 bp GGTCCGTCTGCGCTCAGTCACCTCTGGCCCGTCAAGCCCTCCCAATaGCCGGCAGCTAGCACGAAGCCCCTGTTCTCCCGTGCGCCCCTC +
Preference number: 5 (lower is better)
Translates to: GPSALSHLWPVKPSQ*PAASTKPLFSRAPL
Trigger: GAGGGGCGCACGGGAGAACAGGGGCTTCGTGCTAGCTGCCGGGCATTGGGAGGGCTTGACGGGCCAGAGGTGACTGAGCGCAGACGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS TCA 90 bp GGGCGGGGAGTGGGAGTGTCACAGCCCCACACAGAGCCTTGCTCCTaGGGTCCGTCTGCGCTCAGTCACCTCTGGCCCGTCAAGCCCTCC +
Preference number: 5 (lower is better)
Translates to: GRGVGVSQPHTEPCS*GPSALSHLWPVKPS
Trigger: GGAGGGCTTGACGGGCCAGAGGTGACTGAGCGCAGACGGACCTCAGGAGCAAGGCTCTGTGTGGGGCTGTGACACTCCCACTCCCCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS GCA 90 bp CGTACAGTCAGAGCTGGAAGGGGTACTGTCGGAGGTAGTCGGCCATaGGCCGGGGCAGTGGCAGGCAGTCCACGTCGGCCACCAGACGGT +
Preference number: 5 (lower is better)
Translates to: RTVRAGRGTVGGSRP*AGAVAGSPRRPPDG
Trigger: ACCGTCTGGTGGCCGACGTGGACTGCCTGCCACTGCCCCGGCGCATGGCCGACTACCTCCGACAGTACCCCTTCCAGCTCTGACTGTACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS GCA 90 bp GGGAGTGTCACAGCCCCACACAGAGCCTTGCTCCTGAGGTCCGTCTaGGCTCAGTCACCTCTGGCCCGTCAAGCCCTCCCAATGCCCGGC +
Preference number: 5 (lower is better)
Translates to: GSVTAPHRALLLRSV*AQSPLARQALPMPG
Trigger: GCCGGGCATTGGGAGGGCTTGACGGGCCAGAGGTGACTGAGCGCAGACGGACCTCAGGAGCAAGGCTCTGTGTGGGGCTGTGACACTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CCA 90 bp CTGGAAGGGGTACTGTCGGAGGTAGTCGGCCATGCGCCGGGGCAGTaGCAGGCAGTCCACGTCGGCCACCAGACGGTTGATGACAAGGCG +
Preference number: 5 (lower is better)
Translates to: LEGVLSEVVGHAPGQ*QAVHVGHQTVDDKA
Trigger: CGCCTTGTCATCAACCGTCTGGTGGCCGACGTGGACTGCCTGCCACTGCCCCGGCGCATGGCCGACTACCTCCGACAGTACCCCTTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS-3UTR CAA 90 bp GGCCCAAGTCCAGCTGGGGCTGATGTCCCCTCCAGGGTGCGACTGGGTGAGGGTCATCTTCTGCAGGTGTaGTCGGGCCTCGCTGGCCGT +
Preference number: 5 (lower is better)
Translates to: GPSPAGADVPSRVRLGEGHLLQV*SGLAGR
Trigger: ACGGCCAGCGAGGCCCGACAACACCTGCAGAAGATG...ACCCTCACCCAGTCGCACCCTGGAGGGGACATCAGCCCCAGCTGGACTTGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CAA 90 bp GTCCAGCTGGGGCTGATGTCCCCTCCAGGGTGCGACTGGGTGAGGGTGGGCAGATCGGCCACCAGACGGTaGATGACAAGGCGGCACAGG +
Preference number: 5 (lower is better)
Translates to: VQLGLMSPPGCDWVRVGRSATRR*MTRRHR
Trigger: CCTGTGCCGCCTTGTCATCAACCGTCTGGTGGCCGA...TCTGCCCACCCTCACCCAGTCGCACCCTGGAGGGGACATCAGCCCCAGCTGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CAA 90 bp CTGGCTCTTCCTGGGCCAGCTGCCAGAGGTATGCAGGCACCAGGATGCCTGGAGGGCTGCATGACTGGCTaGGGCAGTTCCAGGGACGGG +
Preference number: 5 (lower is better)
Translates to: LALPGPAARGMQAPGCLEGCMTG*GSSRDG
Trigger: CCCGTCCCTGGAACTGCCCAAGCCAGTCATGCAGCC...CTCCAGGCATCCTGGTGCCTGCATACCTCTGGCAGCTGGCCCAGGAAGAGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CAA 90 bp AGTCCAGCTGGGGCTGATGTCCCCTCCAGGGTGCGACTGGGTGAGGGTGGGCAGGGCCTGGACAAGCAGTaGGAGTCCAGACGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: SPAGADVPSRVRLGEGGQGLDKQ*ESRRKL
Trigger: CAGCTTCCGTCTGGACTCCAACTGCTTGTCCAGGCC...CTGCCCACCCTCACCCAGTCGCACCCTGGAGGGGACATCAGCCCCAGCTGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CAA 90 bp CTGGCTCTTCCTGGGCCAGCTGCCAGAGGTATGCAGGCACCAGGATGCCTGGAGAAGGCGGCACAGGTGTaGCAGGCTGCGGGCACTGCT +
Preference number: 5 (lower is better)
Translates to: LALPGPAARGMQAPGCLEKAAQV*QAAGTA
Trigger: AGCAGTGCCCGCAGCCTGCAACACCTGTGCCGCCTT...CTCCAGGCATCCTGGTGCCTGCATACCTCTGGCAGCTGGCCCAGGAAGAGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CAA 90 bp CTTGCTGGCTCTTCCTGGGCCAGCTGCCAGAGGTATGCAGGCACCAGGATGCCTAAGGCGGCACAGGTGTaGCAGGCTGCGGGCACTGCT +
Preference number: 5 (lower is better)
Translates to: LAGSSWASCQRYAGTRMPKAAQV*QAAGTA
Trigger: AGCAGTGCCCGCAGCCTGCAACACCTGTGCCGCCTT...AGGCATCCTGGTGCCTGCATACCTCTGGCAGCTGGCCCAGGAAGAGCCAGCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS TCA 90 bp GACGCCGTGCCGTTAGCATCCATCTGCTCCAATGAGAACCCAGGCTaGGCCCACCCTGTGAGTTCCTCCTTTAGCCGGCCAGCCCCCGGT +
Preference number: 5 (lower is better)
Translates to: DAVPLASICSNENPG*AHPVSSSFSRPAPG
Trigger: ACCGGGGGCTGGCCGGCTAAAGGAGGAACTCACAGGGTGGGCTCAGCCTGGGTTCTCATTGGAGCAGATGGATGCTAACGGCACGGCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS GCA 90 bp GGTACCCCAAGCAGGACCAGGCCAAACCCAGGGCCTCCCGAGAGTTaGAGACCATCAGGTGCCAGCCTGAGGAAAGGCAAGGATCTGCGG +
Preference number: 5 (lower is better)
Translates to: GTPSRTRPNPGPPES*RPSGASLRKGKDLR
Trigger: CCGCAGATCCTTGCCTTTCCTCAGGCTGGCACCTGATGGTCTGCAACTCTCGGGAGGCCCTGGGTTTGGCCTGGTCCTGCTTGGGGTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS-3UTR CAA 90 bp CTGGCTCTTCCTGGGCCAGCTGCCAGAGGTATGCAGGCACCAGGATGCCTGGAGCTGGGTCCAGCACCTTaGGCTCACTCTCTGTCTGGG +
Preference number: 5 (lower is better)
Translates to: LALPGPAARGMQAPGCLELGPAP*AHSLSG
Trigger: CCCAGACAGAGAGTGAGCCAAAGGTGCTGGACCCAG...CTCCAGGCATCCTGGTGCCTGCATACCTCTGGCAGCTGGCCCAGGAAGAGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CAA 90 bp TGCCCATACAGTTCAGGTGGCCAGGGCAGGCAAGCGAGTGGAGGTCTGGGCCCATCCCATGCCTTGCTCTaGCTGGCTCTTCCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: CPYSSGGQGRQASGGLGPSHALL*LALPGP
Trigger: TGGCCCAGGAAGAGCCAGCAAGAGCAAGGCATGGGA...TGGGCCCAGACCTCCACTCGCTTGCCTGCCCTGGCCACCTGAACTGTATGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS GCA 90 bp TCCACGTCGGCCACCAGACGGTTGATGACAAGGCGGCACAGGTGTTaGAGGCTGCGGGCACTGCTTCTGCGTACAAAGGGCTGCACCAGT +
Preference number: 5 (lower is better)
Translates to: STSATRRLMTRRHRC*RLRALLLRTKGCTS
Trigger: ACTGGTGCAGCCCTTTGTACGCAGAAGCAGTGCCCGCAGCCTGCAACACCTGTGCCGCCTTGTCATCAACCGTCTGGTGGCCGACGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS GCA 90 bp GACCAGGCCAAACCCAGGGCCTCCCGAGAGTTGCAGACCATCAGGTaGCAGCCTGAGGAAAGGCAAGGATCTGCGGCTGGCTTCCCAAGA +
Preference number: 5 (lower is better)
Translates to: DQAKPRASRELQTIR*QPEERQGSAAGFPR
Trigger: TCTTGGGAAGCCAGCCGCAGATCCTTGCCTTTCCTCAGGCTGGCACCTGATGGTCTGCAACTCTCGGGAGGCCCTGGGTTTGGCCTGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS GCA 90 bp CCTTGGCCTCACCTTCCACCCTCCCTCACTTGGCACCAGGCCAGTTaGGATAAGCACAGCCACCCAGTCCTCCCTGAGTGCAGAACACCC +
Preference number: 5 (lower is better)
Translates to: PWPHLPPSLTWHQAS*DKHSHPVLPECRTP
Trigger: GGGTGTTCTGCACTCAGGGAGGACTGGGTGGCTGTGCTTATCGCAACTGGCCTGGTGCCAAGTGAGGGAGGGTGGAAGGTGAGGCCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS-3UTR CAA 90 bp CCCCGGGGCCTGCGCCACAGTGAGACCAGCTCTATGCAGATACAGCTCTGTCCTTCCCATGCCTTGCTCTaGCTGGCTCTTCCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: PRGLRHSETSSMQIQLCPSHALL*LALPGP
Trigger: TGGCCCAGGAAGAGCCAGCAAGAGCAAGGCATGGGA...AGGACAGAGCTGTATCTGCATAGAGCTGGTCTCACTGTGGCGCAGGCCCCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS TCA 90 bp CAAACCCAGGGCCTCCCGAGAGTTGCAGACCATCAGGTGCCAGCCTaGGGAAAGGCAAGGATCTGCGGCTGGCTTCCCAAGAAGAGCCTA +
Preference number: 5 (lower is better)
Translates to: QTQGLPRVADHQVPA*GKARICGWLPKKSL
Trigger: TAGGCTCTTCTTGGGAAGCCAGCCGCAGATCCTTGCCTTTCCTCAGGCTGGCACCTGATGGTCTGCAACTCTCGGGAGGCCCTGGGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS TCA 90 bp GTCCGCTCCACAGCCAGCAAAGGACGAGGTCTAGAAGGCAGTGGATaGGCAGTGAGTGGAGGACCCATGCTTCCCCCATCTCCAGAGACC +
Preference number: 5 (lower is better)
Translates to: VRSTASKGRGLEGSG*AVSGGPMLPPSPET
Trigger: GGTCTCTGGAGATGGGGGAAGCATGGGTCCTCCACTCACTGCTCATCCACTGCCTTCTAGACCTCGTCCTTTGCTGGCTGTGGAGCGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS GCA 90 bp CACAGGTGTTGCAGGCTGCGGGCACTGCTTCTGCGTACAAAGGGCTaGACCAGTTTTAGGTGTACAGCAGTGGCTGGTGGAGGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: HRCCRLRALLLRTKG*TSFRCTAVAGGGAG
Trigger: GCCTGCTCCTCCACCAGCCACTGCTGTACACCTAAAACTGGTGCAGCCCTTTGTACGCAGAAGCAGTGCCCGCAGCCTGCAACACCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS CCA 90 bp CCAGGATGCGTGGCCTGGACAAGCAGTTGGAGTCCAGACGGAAGCTaGAGTCGGCATACTCAATGCGTACATTGGTGGGGCCACGAGTGG +
Preference number: 5 (lower is better)
Translates to: PGCVAWTSSWSPDGS*SRHTQCVHWWGHEW
Trigger: CCACTCGTGGCCCCACCAATGTACGCATTGAGTATGCCGACTCCAGCTTCCGTCTGGACTCCAACTGCTTGTCCAGGCCACGCATCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS CCA 90 bp ATAGTGCTGCACAAGGCTGACCACATCCGGAAAGGCCAGGATGCGTaGCCTGGACAAGCAGTTGGAGTCCAGACGGAAGCTGGAGTCGGC +
Preference number: 5 (lower is better)
Translates to: IVLHKADHIRKGQDA*PGQAVGVQTEAGVG
Trigger: GCCGACTCCAGCTTCCGTCTGGACTCCAACTGCTTGTCCAGGCCACGCATCCTGGCCTTTCCGGATGTGGTCAGCCTTGTGCAGCACTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS CCA 90 bp AGAGCTACCTTCCCAGGAGCATGGTTGGTGGCTAGCCAGTCAGGCTaGAACCTCTGTGGGTGGCCACGTCCAGATAGCTTAGCCGGTCCT +
Preference number: 5 (lower is better)
Translates to: RATFPGAWLVASQSG*NLCGWPRPDSLAGP
Trigger: AGGACCGGCTAAGCTATCTGGACGTGGCCACCCACAGAGGTTCCAGCCTGACTGGCTAGCCACCAACCATGCTCCTGGGAAGGTAGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CCA 90 bp AGCAGGGTGATACTAGGGCTTCCTCCTTGGGAGGGCAGCAGGGACTaGCTCTACTTCCCCAGGAAGACAGCTGCTCCTCCCTCACTCCTT +
Preference number: 5 (lower is better)
Translates to: SRVILGLPPWEGSRD*LYFPRKTAAPPSLL
Trigger: AAGGAGTGAGGGAGGAGCAGCTGTCTTCCTGGGGAAGTAGAGCCAGTCCCTGCTGCCCTCCCAAGGAGGAAGCCCTAGTATCACCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CCA 90 bp CCCAGTCCGCTCCACAGCCAGCAAAGGACGAGGTCTAGAAGGCAGTaGATGAGCAGTGAGTGGAGGACCCATGCTTCCCCCATCTCCAGA +
Preference number: 5 (lower is better)
Translates to: PSPLHSQQRTRSRRQ*MSSEWRTHASPISR
Trigger: TCTGGAGATGGGGGAAGCATGGGTCCTCCACTCACTGCTCATCCACTGCCTTCTAGACCTCGTCCTTTGCTGGCTGTGGAGCGGACTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS-3UTR CAA 90 bp CCATCCTCTGACACATGGCTCAGTATAATGAAGCCACATGCGGCCTGGGGGCATGGCTGCATGACTGGCTaGGGCAGTTCCAGGGACGGG +
Preference number: 5 (lower is better)
Translates to: PSSDTWLSIMKPHAAWGHGCMTG*GSSRDG
Trigger: CCCGTCCCTGGAACTGCCCAAGCCAGTCATGCAGCC...ATGCCCCCAGGCCGCATGTGGCTTCATTATACTGAGCCATGTGTCAGAGGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CAA 90 bp GAAAAACCAGGGCTGAGAGTGCCCATACAGTTCAGGTGGCCAGGGCAGGCAAGCCCCCTCTCCCATGCCTaGCTCTTGCTGGCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: EKPGLRVPIQFRWPGQASPLSHA*LLLALP
Trigger: AGGAAGAGCCAGCAAGAGCAAGGCATGGGAGAGGGG...GCTTGCCTGCCCTGGCCACCTGAACTGTATGGGCACTCTCAGCCCTGGTTTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS TCA 90 bp TTCGGGTATCAGCAGTGCAGGAGGCCACATAGTGCTGCACAAGGCTaGCCACATCCGGAAAGGCCAGGATGCGTGGCCTGGACAAGCAGT +
Preference number: 5 (lower is better)
Translates to: FGYQQCRRPHSAAQG*PHPERPGCVAWTSS
Trigger: ACTGCTTGTCCAGGCCACGCATCCTGGCCTTTCCGGATGTGGTCAGCCTTGTGCAGCACTATGTGGCCTCCTGCACTGCTGATACCCGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS TCA 90 bp AGGCAGGAGCCAAGGTCCTTCTCACATTGGGATCCCAGACTGGGCTaGGACAGGGTTGTGAGACGATTGTGGGGGTACCCCAAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: RQEPRSFSHWDPRLG*DRVVRRLWGYPKQD
Trigger: GTCCTGCTTGGGGTACCCCCACAATCGTCTCACAACCCTGTCTCAGCCCAGTCTGGGATCCCAATGTGAGAAGGACCTTGGCTCCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CCA 90 bp CCGAAGGTAGGAGAAGGTCTTGGCTATGCACAGCAGATCCTCCTCTaGGTCCAGCACCTTTGGCTCACTCTCTGTCTGGGCTGGGGTACC +
Preference number: 5 (lower is better)
Translates to: PKVGEGLGYAQQILL*VQHLWLTLCLGWGT
Trigger: GGTACCCCAGCCCAGACAGAGAGTGAGCCAAAGGTGCTGGACCCAGAGGAGGATCTGCTGTGCATAGCCAAGACCTTCTCCTACCTTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS CCA 90 bp GGAGCATGGTTGGTGGCTAGCCAGTCAGGCTGGAACCTCTGTGGGTaGCCACGTCCAGATAGCTTAGCCGGTCCTCAGATCCCACATGTA +
Preference number: 5 (lower is better)
Translates to: GAWLVASQSGWNLCG*PRPDSLAGPQIPHV
Trigger: TACATGTGGGATCTGAGGACCGGCTAAGCTATCTGGACGTGGCCACCCACAGAGGTTCCAGCCTGACTGGCTAGCCACCAACCATGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS-3UTR CAA 90 bp TGTCGATCTCAGTTCCTCTGCATGTCATCCTCCCAGAAACAGAGGCTGGCTGCCTCGGCCACCAGACGGTaGATGACAAGGCGGCACAGG +
Preference number: 5 (lower is better)
Translates to: CRSQFLCMSSSQKQRLAASATRR*MTRRHR
Trigger: CCTGTGCCGCCTTGTCATCAACCGTCTGGTGGCCGA...GGCAGCCAGCCTCTGTTTCTGGGAGGATGACATGCAGAGGAACTGAGATCGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS GCA 90 bp GGGTGCGTGCTGTCACGTACTAAGAACGTGCCTTCTGGCATCTTCTaGAGGTGTTGTCGGGCCTCGCTGGCCGTAATGGAACCCCAATAC +
Preference number: 5 (lower is better)
Translates to: GCVLSRTKNVPSGIF*RCCRASLAVMEPQY
Trigger: GTATTGGGGTTCCATTACGGCCAGCGAGGCCCGACAACACCTGCAGAAGATGCCAGAAGGCACGTTCTTAGTACGTGACAGCACGCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS-3UTR CAA 90 bp AGAGTGGACACATTCACAGACGGGTGGGTCAGTACCAGGACATCCAGGATTGCCGGCCTGGACAAGCAGTaGGAGTCCAGACGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: RVDTFTDGWVSTRTSRIAGLDKQ*ESRRKL
Trigger: CAGCTTCCGTCTGGACTCCAACTGCTTGTCCAGGCC...GGCAATCCTGGATGTCCTGGTACTGACCCACCCGTCTGTGAATGTGTCCACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CAA 90 bp CTGTCGATCTCAGTTCCTCTGCATGTCATCCTCCCAGAAACAGAGGCTGGCTGCCCCCTCTCCCATGCCTaGCTCTTGCTGGCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: LSISVPLHVILPETEAGCPLSHA*LLLALP
Trigger: AGGAAGAGCCAGCAAGAGCAAGGCATGGGAGAGGGG...GCAGCCAGCCTCTGTTTCTGGGAGGATGACATGCAGAGGAACTGAGATCGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CAA 90 bp CTTGCTGGCTCTTCCTGGGCCAGCTGCCAGAGGTATGCAGGCACCAGGATGCCTACATCCAGGATTGCCTaGGTTCCAGCAAGATGTCTC +
Preference number: 5 (lower is better)
Translates to: LAGSSWASCQRYAGTRMPTSRIA*VPARCL
Trigger: GAGACATCTTGCTGGAACCAAGGCAATCCTGGATGT...AGGCATCCTGGTGCCTGCATACCTCTGGCAGCTGGCCCAGGAAGAGCCAGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS TCA 90 bp ACAGTGGCCTCTAAAGGCACTGGCAAGTCTCACCTCCTGTCAGTATaGGCTCCCACCAAGGGCAGGGACCTAATCCACACTCCAGTTCCC +
Preference number: 5 (lower is better)
Translates to: TVASKGTGKSHLLSV*APTKGRDLIHTPVP
Trigger: GGGAACTGGAGTGTGGATTAGGTCCCTGCCCTTGGTGGGAGCTCATACTGACAGGAGGTGAGACTTGCCAGTGCCTTTAGAGGCCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CCA 90 bp CTTCCTGAGCTCCTGTCACATCACCATGGCCAGCATCAGACCCTTTaGTTGAAGGGGTTGCTGAGGTTCAGGACAGAGTGGATGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LPELLSHHHGQHQTL*LKGLLRFRTEWMAR
Trigger: CCTGGCCATCCACTCTGTCCTGAACCTCAGCAACCCCTTCAACCAAAGGGTCTGATGCTGGCCATGGTGATGTGACAGGAGCTCAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS-3UTR CAA 90 bp GAAAAACCAGGGCTGAGAGTGCCCATACAGTTCAGGTGGCCAGGGCAGGCAAGCATGTGTGTGCCCGCTTaGGAGCGCAGCAGTCTAAAA +
Preference number: 5 (lower is better)
Translates to: EKPGLRVPIQFRWPGQASMCVPA*ERSSLK
Trigger: TTTTAGACTGCTGCGCTCCAAAGCGGGCACACACAT...GCTTGCCTGCCCTGGCCACCTGAACTGTATGGGCACTCTCAGCCCTGGTTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443053.6
CDS TCA 90 bp TGTGGGATCTTGGAAATCCCTCTTGGAGAGCTGGAGGCCAAATTTTaGGATGACCTGCTTGCTGGGGCCCAGAGCTACCTTCCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: CGILEIPLGELEAKF*DDLLAGAQSYLPRS
Trigger: GCTCCTGGGAAGGTAGCTCTGGGCCCCAGCAAGCAGGTCATCTCAAAATTTGGCCTCCAGCTCTCCAAGAGGGATTTCCAAGATCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS GCA 90 bp CCCAATACCAGCCAGATTCCCGAAGGTAGGAGAAGGTCTTGGCTATaGACAGCAGATCCTCCTCTGGGTCCAGCACCTTTGGCTCACTCT +
Preference number: 5 (lower is better)
Translates to: PNTSQIPEGRRRSWL*TADPPLGPAPLAHS
Trigger: AGAGTGAGCCAAAGGTGCTGGACCCAGAGGAGGATCTGCTGTGCATAGCCAAGACCTTCTCCTACCTTCGGGAATCTGGCTGGTATTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS GCA 90 bp TCCAAGGTTACTAGCAGGCAGGGCAGCAGGCAGGCTAGCGTAGAGTaGTCTGGGCCCAGAAGAATATCTGGGATTGTTGGCCACATCTTG +
Preference number: 5 (lower is better)
Translates to: SKVTSRQGSRQASVE*SGPRRISGIVGHIL
Trigger: CAAGATGTGGCCAACAATCCCAGATATTCTTCTGGGCCCAGAGCACTCTACGCTAGCCTGCCTGCTGCCCTGCCTGCTAGTAACCTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS GCA 90 bp TGGAAATCCCTCTTGGAGAGCTGGAGGCCAAATTTTGAGATGACCTaGTTGCTGGGGCCCAGAGCTACCTTCCCAGGAGCATGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: WKSLLESWRPNFEMT*LLGPRATFPGAWLV
Trigger: CACCAACCATGCTCCTGGGAAGGTAGCTCTGGGCCCCAGCAAGCAGGTCATCTCAAAATTTGGCCTCCAGCTCTCCAAGAGGGATTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CCA 90 bp TGGAACCCCAATACCAGCCAGATTCCCGAAGGTAGGAGAAGGTCTTaGCTATGCACAGCAGATCCTCCTCTGGGTCCAGCACCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: WNPNTSQIPEGRRRS*LCTADPPLGPAPLA
Trigger: AGCCAAAGGTGCTGGACCCAGAGGAGGATCTGCTGTGCATAGCCAAGACCTTCTCCTACCTTCGGGAATCTGGCTGGTATTGGGGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS-3UTR CAA 90 bp TGGTTCCAGCAAGATGTCTCAGGATGGGCTTTCCACAGGGAAGAACCAGAGAAGCTGGGTCCAGCACCTTaGGCTCACTCTCTGTCTGGG +
Preference number: 5 (lower is better)
Translates to: WFQQDVSGWAFHREEPEKLGPAP*AHSLSG
Trigger: CCCAGACAGAGAGTGAGCCAAAGGTGCTGGACCCAG...CTTCTCTGGTTCTTCCCTGTGGAAAGCCCATCCTGAGACATCTTGCTGGAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS TCA 90 bp GATCTTGGAAATCCCTCTTGGAGAGCTGGAGGCCAAATTTTGAGATaGCCTGCTTGCTGGGGCCCAGAGCTACCTTCCCAGGAGCATGGT +
Preference number: 5 (lower is better)
Translates to: DLGNPSWRAGGQILR*PACWGPELPSQEHG
Trigger: ACCATGCTCCTGGGAAGGTAGCTCTGGGCCCCAGCAAGCAGGTCATCTCAAAATTTGGCCTCCAGCTCTCCAAGAGGGATTTCCAAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS GCA 90 bp CTGGCTCTACTTCCCCAGGAAGACAGCTGCTCCTCCCTCACTCCTTaGAAAATACATCTCCAAGCCTTAGTTCTGGGTCTAGTCCCTGGC +
Preference number: 5 (lower is better)
Translates to: LALLPQEDSCSSLTP*KIHLQALVLGLVPG
Trigger: GCCAGGGACTAGACCCAGAACTAAGGCTTGGAGATGTATTTTGCAAGGAGTGAGGGAGGAGCAGCTGTCTTCCTGGGGAAGTAGAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS GCA 90 bp ACTGAAATAATCCCCTACCCATACAAGTCAGCCTATCCTGGCCTCTaGTTCTCCCAGTGGAGGGTCTGGGGTGGACAGTGGCCTCTAAAG +
Preference number: 5 (lower is better)
Translates to: TEIIPYPYKSAYPGL*FSQWRVWGGQWPLK
Trigger: CTTTAGAGGCCACTGTCCACCCCAGACCCTCCACTGGGAGAAGCAGAGGCCAGGATAGGCTGACTTGTATGGGTAGGGGATTATTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CCA 90 bp TACCCTGGCTGTACTGTGGGATCTTGGAAATCCCTCTTGGAGAGCTaGAGGCCAAATTTTGAGATGACCTGCTTGCTGGGGCCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: YPGCTVGSWKSLLES*RPNFEMTCLLGPRA
Trigger: AGCTCTGGGCCCCAGCAAGCAGGTCATCTCAAAATTTGGCCTCCAGCTCTCCAAGAGGGATTTCCAAGATCCCACAGTACAGCCAGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS-3UTR CAA 90 bp CCATCCTCTGACACATGGCTCAGTATAATGAAGCCACATGCGGCCTGGGGGCATTACTCAATGCGTACATaGGTGGGGCCACGAGTGGTT +
Preference number: 5 (lower is better)
Translates to: PSSDTWLSIMKPHAAWGHYSMRT*VGPRVV
Trigger: AACCACTCGTGGCCCCACCAATGTACGCATTGAGTA...ATGCCCCCAGGCCGCATGTGGCTTCATTATACTGAGCCATGTGTCAGAGGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CAA 90 bp CTGTCGATCTCAGTTCCTCTGCATGTCATCCTCCCAGAAACAGAGGCTGGCTGCCCAGGACATCCAGGATaGCCTTGGTTCCAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: LSISVPLHVILPETEAGCPGHPG*PWFQQD
Trigger: ATCTTGCTGGAACCAAGGCAATCCTGGATGTCCTGG...GCAGCCAGCCTCTGTTTCTGGGAGGATGACATGCAGAGGAACTGAGATCGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS TCA 90 bp GTCTCTCAGAGGGACCTAGGTCCACACTGGCCAGGACTTAGAGACTaGAATAATCCCCTACCCATACAAGTCAGCCTATCCTGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: VSQRDLGPHWPGLRD*NNPLPIQVSLSWPL
Trigger: CAGAGGCCAGGATAGGCTGACTTGTATGGGTAGGGGATTATTTCAGTCTCTAAGTCCTGGCCAGTGTGGACCTAGGTCCCTCTGAGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CCA 90 bp AGGTATTCAGGAGTCCCAGAATGCAGACAGGAGGAAGGAACTTGCTaGAGACAGCAAGGGAGAAGTAGTCTTCCCAGCACCTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: RYSGVPECRQEEGTC*RQQGRSSLPSTSMS
Trigger: GGACATGGAGGTGCTGGGAAGACTACTTCTCCCTTGCTGTCTCCAGCAAGTTCCTTCCTCCTGTCTGCATTCTGGGACTCCTGAATACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS-3UTR CAA 90 bp CTGTCGATCTCAGTTCCTCTGCATGTCATCCTCCCAGAAACAGAGGCTGGCTGCACATCCAGGATTGCCTaGGTTCCAGCAAGATGTCTC +
Preference number: 5 (lower is better)
Translates to: LSISVPLHVILPETEAGCTSRIA*VPARCL
Trigger: GAGACATCTTGCTGGAACCAAGGCAATCCTGGATGT...GCAGCCAGCCTCTGTTTCTGGGAGGATGACATGCAGAGGAACTGAGATCGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS CCA 90 bp ACTCTGGCACACCACAGCCTGACAAAAACTTTTCCACACCTACCCTaGCTGTACTGTGGGATCTTGGAAATCCCTCTTGGAGAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: TLAHHSLTKTFPHLP*LYCGILEIPLGELE
Trigger: CTCCAGCTCTCCAAGAGGGATTTCCAAGATCCCACAGTACAGCCAGGGTAGGTGTGGAAAAGTTTTTGTCAGGCTGTGGTGTGCCAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS-3UTR CAA 90 bp TGGTTCCAGCAAGATGTCTCAGGATGGGCTTTCCACAGGGAAGAACCAGAGAAGCCAGGACATCCAGGATaGCCTTGGTTCCAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: WFQQDVSGWAFHREEPEKPGHPG*PWFQQD
Trigger: ATCTTGCTGGAACCAAGGCAATCCTGGATGTCCTGG...CTTCTCTGGTTCTTCCCTGTGGAAAGCCCATCCTGAGACATCTTGCTGGAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS-3UTR CAA 90 bp CCATCCTCTGACACATGGCTCAGTATAATGAAGCCACATGCGGCCTGGGGGCATCAGCAGTCTAAAACTTaGTTCCCTGACACCCAACAG +
Preference number: 5 (lower is better)
Translates to: PSSDTWLSIMKPHAAWGHQQSKT*FPDTQQ
Trigger: CTGTTGGGTGTCAGGGAACAAAGTTTTAGACTGCTG...ATGCCCCCAGGCCGCATGTGGCTTCATTATACTGAGCCATGTGTCAGAGGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443053.6
CDS GCA 90 bp GGGCTTCAGTTTCCCTTTTCCGCAATAAAGGGTCCCACCAACCCATaGACTGAGAGGTTCAGTAACACCATATTCTTGGATGGCTGGGGT +
Preference number: 5 (lower is better)
Translates to: GLQFPFSAIKGPTNP*TERFSNTIFLDGWG
Trigger: ACCCCAGCCATCCAAGAATATGGTGTTACTGAACCTCTCAGTGCATGGGTTGGTGGGACCCTTTATTGCGGAAAAGGGAAACTGAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CCA 72 bp GCGGCTGGAGGGAACCAGTGGGCGCGGAGCGCGTGCTaGGTAGGCTCCCGGGGCGCGCGGGCGCAGGACAGG +
Preference number: 6 (lower is better)
Translates to: AAGGNQWARSAC*VGSRGARAQDR
Trigger: CCTGTCCTGCGCCCGCGCGCCCCGGGAGCCTACCCAGCACGCGCTCCGCGCCCACTGGTTCCCTCCAGCCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348721.4
ENST00000443053.6
CDS GCA 72 bp AGAGCTGGAAGGGGTACTGTCGGAGGTAGTCGGCCATaGGCCGGGGCAGTGGCAGGCAGTCCACGTCGGCCA +
Preference number: 6 (lower is better)
Translates to: RAGRGTVGGSRP*AGAVAGSPRRP
Trigger: TGGCCGACGTGGACTGCCTGCCACTGCCCCGGCGCATGGCCGACTACCTCCGACAGTACCCCTTCCAGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS CAA 90 bp ATGCGCCGGGGCAGTGGCAGGCAGTCCACGTCGGCCACCAGACGGTaGATGACAAGGCGGCACAGGTGTTGCAGGCTGCGGGCACTGCTT +
Preference number: 6 (lower is better)
Translates to: MRRGSGRQSTSATRR*MTRRHRCCRLRALL
Trigger: AAGCAGTGCCCGCAGCCTGCAACACCTGTGCCGCCTTGTCATCAACCGTCTGGTGGCCGACGTGGACTGCCTGCCACTGCCCCGGCGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS GCA 72 bp GCGCTCAGTCACCTCTGGCCCGTCAAGCCCTCCCAATaGCCGGCAGCTAGCACGAAGCCCCTGTTCTCCCGT +
Preference number: 6 (lower is better)
Translates to: ALSHLWPVKPSQ*PAASTKPLFSR
Trigger: ACGGGAGAACAGGGGCTTCGTGCTAGCTGCCGGGCATTGGGAGGGCTTGACGGGCCAGAGGTGACTGAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CCA 72 bp GTACTGTCGGAGGTAGTCGGCCATGCGCCGGGGCAGTaGCAGGCAGTCCACGTCGGCCACCAGACGGTTGAT +
Preference number: 6 (lower is better)
Translates to: VLSEVVGHAPGQ*QAVHVGHQTVD
Trigger: ATCAACCGTCTGGTGGCCGACGTGGACTGCCTGCCACTGCCCCGGCGCATGGCCGACTACCTCCGACAGTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS CAA 72 bp GGCAGTGGCAGGCAGTCCACGTCGGCCACCAGACGGTaGATGACAAGGCGGCACAGGTGTTGCAGGCTGCGG +
Preference number: 6 (lower is better)
Translates to: GSGRQSTSATRR*MTRRHRCCRLR
Trigger: CCGCAGCCTGCAACACCTGTGCCGCCTTGTCATCAACCGTCTGGTGGCCGACGTGGACTGCCTGCCACTGCC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS TCA 72 bp GTGGGAGTGTCACAGCCCCACACAGAGCCTTGCTCCTaGGGTCCGTCTGCGCTCAGTCACCTCTGGCCCGTC +
Preference number: 6 (lower is better)
Translates to: VGVSQPHTEPCS*GPSALSHLWPV
Trigger: GACGGGCCAGAGGTGACTGAGCGCAGACGGACCTCAGGAGCAAGGCTCTGTGTGGGGCTGTGACACTCCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS GCA 72 bp ACAGCCCCACACAGAGCCTTGCTCCTGAGGTCCGTCTaGGCTCAGTCACCTCTGGCCCGTCAAGCCCTCCCA +
Preference number: 6 (lower is better)
Translates to: TAPHRALLLRSV*AQSPLARQALP
Trigger: TGGGAGGGCTTGACGGGCCAGAGGTGACTGAGCGCAGACGGACCTCAGGAGCAAGGCTCTGTGTGGGGCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CAA 90 bp GTCCACGTCGGCCACCAGACGGTTGATGACAAGGCGGCACAGGTGTaGCAGGCTGCGGGCACTGCTTCTGCGTACAAAGGGCTGCACCAG +
Preference number: 6 (lower is better)
Translates to: VHVGHQTVDDKAAQV*QAAGTASAYKGLHQ
Trigger: CTGGTGCAGCCCTTTGTACGCAGAAGCAGTGCCCGCAGCCTGCAACACCTGTGCCGCCTTGTCATCAACCGTCTGGTGGCCGACGTGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS CAA 90 bp GGGTACCCCAAGCAGGACCAGGCCAAACCCAGGGCCTCCCGAGAGTaGCAGACCATCAGGTGCCAGCCTGAGGAAAGGCAAGGATCTGCG +
Preference number: 6 (lower is better)
Translates to: GYPKQDQAKPRASRE*QTIRCQPEERQGSA
Trigger: CGCAGATCCTTGCCTTTCCTCAGGCTGGCACCTGATGGTCTGCAACTCTCGGGAGGCCCTGGGTTTGGCCTGGTCCTGCTTGGGGTACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS TCA 72 bp CAGCAGTGCAGGAGGCCACATAGTGCTGCACAAGGCTaGCCACATCCGGAAAGGCCAGGATGCGTGGCCTGG +
Preference number: 6 (lower is better)
Translates to: QQCRRPHSAAQG*PHPERPGCVAW
Trigger: CCAGGCCACGCATCCTGGCCTTTCCGGATGTGGTCAGCCTTGTGCAGCACTATGTGGCCTCCTGCACTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS TCA 72 bp TCTGCTCCAATGAGAACCCAGGCTGAGCCCACCCTGTaGGTTCCTCCTTTAGCCGGCCAGCCCCCGGTTTCC +
Preference number: 6 (lower is better)
Translates to: SAPMRTQAEPTL*VPPLAGQPPVS
Trigger: GGAAACCGGGGGCTGGCCGGCTAAAGGAGGAACTCACAGGGTGGGCTCAGCCTGGGTTCTCATTGGAGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS TCA 72 bp GGGGGACGCCGTGCCGTTAGCATCCATCTGCTCCAATaGGAACCCAGGCTGAGCCCACCCTGTGAGTTCCTC +
Preference number: 6 (lower is better)
Translates to: GGRRAVSIHLLQ*EPRLSPPCEFL
Trigger: GAGGAACTCACAGGGTGGGCTCAGCCTGGGTTCTCATTGGAGCAGATGGATGCTAACGGCACGGCGTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS TCA 72 bp GGCCTCCCGAGAGTTGCAGACCATCAGGTGCCAGCCTaGGGAAAGGCAAGGATCTGCGGCTGGCTTCCCAAG +
Preference number: 6 (lower is better)
Translates to: GLPRVADHQVPA*GKARICGWLPK
Trigger: CTTGGGAAGCCAGCCGCAGATCCTTGCCTTTCCTCAGGCTGGCACCTGATGGTCTGCAACTCTCGGGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS GCA 72 bp GCCACCAGACGGTTGATGACAAGGCGGCACAGGTGTTaGAGGCTGCGGGCACTGCTTCTGCGTACAAAGGGC +
Preference number: 6 (lower is better)
Translates to: ATRRLMTRRHRC*RLRALLLRTKG
Trigger: GCCCTTTGTACGCAGAAGCAGTGCCCGCAGCCTGCAACACCTGTGCCGCCTTGTCATCAACCGTCTGGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS GCA 72 bp CACCTTCCACCCTCCCTCACTTGGCACCAGGCCAGTTaGGATAAGCACAGCCACCCAGTCCTCCCTGAGTGC +
Preference number: 6 (lower is better)
Translates to: HLPPSLTWHQAS*DKHSHPVLPEC
Trigger: GCACTCAGGGAGGACTGGGTGGCTGTGCTTATCGCAACTGGCCTGGTGCCAAGTGAGGGAGGGTGGAAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CCA 72 bp TGCTGGGGCCCAGAGCTACCTTCCCAGGAGCATGGTTaGTGGCTAGCCAGTCAGGCTGGAACCTCTGTGGGT +
Preference number: 6 (lower is better)
Translates to: CWGPELPSQEHG*WLASQAGTSVG
Trigger: ACCCACAGAGGTTCCAGCCTGACTGGCTAGCCACCAACCATGCTCCTGGGAAGGTAGCTCTGGGCCCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CAA 72 bp GGCCACCAGACGGTTGATGACAAGGCGGCACAGGTGTaGCAGGCTGCGGGCACTGCTTCTGCGTACAAAGGG +
Preference number: 6 (lower is better)
Translates to: GHQTVDDKAAQV*QAAGTASAYKG
Trigger: CCCTTTGTACGCAGAAGCAGTGCCCGCAGCCTGCAACACCTGTGCCGCCTTGTCATCAACCGTCTGGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS CCA 72 bp CTGGCTGGGCCTCAGGACACCGCCATAATGAAACCATaGCCTTGCCCTCAAGGAGAACCAGACTGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: LAGPQDTAIMKP*PCPQGEPDWLG
Trigger: CCCCAGCCAGTCTGGTTCTCCTTGAGGGCAAGGCCATGGTTTCATTATGGCGGTGTCCTGAGGCCCAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS TCA 72 bp CACATTGGGATCCCAGACTGGGCTGAGACAGGGTTGTaGGACGATTGTGGGGGTACCCCAAGCAGGACCAGG +
Preference number: 6 (lower is better)
Translates to: HIGIPDWAETGL*DDCGGTPSRTR
Trigger: CCTGGTCCTGCTTGGGGTACCCCCACAATCGTCTCACAACCCTGTCTCAGCCCAGTCTGGGATCCCAATGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS GCA 72 bp GGCGGCACAGGTGTTGCAGGCTGCGGGCACTGCTTCTaGGTACAAAGGGCTGCACCAGTTTTAGGTGTACAG +
Preference number: 6 (lower is better)
Translates to: GGTGVAGCGHCF*VQRAAPVLGVQ
Trigger: CTGTACACCTAAAACTGGTGCAGCCCTTTGTACGCAGAAGCAGTGCCCGCAGCCTGCAACACCTGTGCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS GCA 72 bp ATCCCCTACCCATACAAGTCAGCCTATCCTGGCCTCTaGTTCTCCCAGTGGAGGGTCTGGGGTGGACAGTGG +
Preference number: 6 (lower is better)
Translates to: IPYPYKSAYPGL*FSQWRVWGGQW
Trigger: CCACTGTCCACCCCAGACCCTCCACTGGGAGAAGCAGAGGCCAGGATAGGCTGACTTGTATGGGTAGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CCA 72 bp CCGGAAAGGCCAGGATGCGTGGCCTGGACAAGCAGTTaGAGTCCAGACGGAAGCTGGAGTCGGCATACTCAA +
Preference number: 6 (lower is better)
Translates to: PERPGCVAWTSS*SPDGSWSRHTQ
Trigger: TTGAGTATGCCGACTCCAGCTTCCGTCTGGACTCCAACTGCTTGTCCAGGCCACGCATCCTGGCCTTTCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS CCA 72 bp CACAAGGCTGACCACATCCGGAAAGGCCAGGATGCGTaGCCTGGACAAGCAGTTGGAGTCCAGACGGAAGCT +
Preference number: 6 (lower is better)
Translates to: HKADHIRKGQDA*PGQAVGVQTEA
Trigger: AGCTTCCGTCTGGACTCCAACTGCTTGTCCAGGCCACGCATCCTGGCCTTTCCGGATGTGGTCAGCCTTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS CCA 72 bp TTGGTGGCTAGCCAGTCAGGCTGGAACCTCTGTGGGTaGCCACGTCCAGATAGCTTAGCCGGTCCTCAGATC +
Preference number: 6 (lower is better)
Translates to: LVASQSGWNLCG*PRPDSLAGPQI
Trigger: GATCTGAGGACCGGCTAAGCTATCTGGACGTGGCCACCCACAGAGGTTCCAGCCTGACTGGCTAGCCACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CCA 72 bp AGCTGGGGGAAGGGACCCCAGGTAGAGAGGACAGCATaGGCAAACAGCGCCAGTATTGCTTGTGAGGCAGGA +
Preference number: 6 (lower is better)
Translates to: SWGKGPQVERTA*ANSASIACEAG
Trigger: TCCTGCCTCACAAGCAATACTGGCGCTGTTTGCCCATGCTGTCCTCTCTACCTGGGGTCCCTTCCCCCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CCA 72 bp AGGACGAGGTCTAGAAGGCAGTGGATGAGCAGTGAGTaGAGGACCCATGCTTCCCCCATCTCCAGAGACCCC +
Preference number: 6 (lower is better)
Translates to: RTRSRRQWMSSE*RTHASPISRDP
Trigger: GGGGTCTCTGGAGATGGGGGAAGCATGGGTCCTCCACTCACTGCTCATCCACTGCCTTCTAGACCTCGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CCA 72 bp CTCCACAGCCAGCAAAGGACGAGGTCTAGAAGGCAGTaGATGAGCAGTGAGTGGAGGACCCATGCTTCCCCC +
Preference number: 6 (lower is better)
Translates to: LHSQQRTRSRRQ*MSSEWRTHASP
Trigger: GGGGGAAGCATGGGTCCTCCACTCACTGCTCATCCACTGCCTTCTAGACCTCGTCCTTTGCTGGCTGTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CAA 72 bp TCCGGAAAGGCCAGGATGCGTGGCCTGGACAAGCAGTaGGAGTCCAGACGGAAGCTGGAGTCGGCATACTCA +
Preference number: 6 (lower is better)
Translates to: SGKARMRGLDKQ*ESRRKLESAYS
Trigger: TGAGTATGCCGACTCCAGCTTCCGTCTGGACTCCAACTGCTTGTCCAGGCCACGCATCCTGGCCTTTCCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS CAA 90 bp CTGACCACATCCGGAAAGGCCAGGATGCGTGGCCTGGACAAGCAGTaGGAGTCCAGACGGAAGCTGGAGTCGGCATACTCAATGCGTACA +
Preference number: 6 (lower is better)
Translates to: LTTSGKARMRGLDKQ*ESRRKLESAYSMRT
Trigger: TGTACGCATTGAGTATGCCGACTCCAGCTTCCGTCTGGACTCCAACTGCTTGTCCAGGCCACGCATCCTGGCCTTTCCGGATGTGGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS GCA 72 bp GGTAGCTGGGGTGCGTGCTGTCACGTACTAAGAACGTaGCTTCTGGCATCTTCTGCAGGTGTTGTCGGGCCT +
Preference number: 6 (lower is better)
Translates to: GSWGACCHVLRT*LLASSAGVVGP
Trigger: AGGCCCGACAACACCTGCAGAAGATGCCAGAAGGCACGTTCTTAGTACGTGACAGCACGCACCCCAGCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS GCA 72 bp TGCAGGCTGCGGGCACTGCTTCTGCGTACAAAGGGCTaGACCAGTTTTAGGTGTACAGCAGTGGCTGGTGGA +
Preference number: 6 (lower is better)
Translates to: CRLRALLLRTKG*TSFRCTAVAGG
Trigger: TCCACCAGCCACTGCTGTACACCTAAAACTGGTGCAGCCCTTTGTACGCAGAAGCAGTGCCCGCAGCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS GCA 72 bp GGGCCTCAGGACACCGCCATAATGAAACCATGGCCTTaGCCTCAAGGAGAACCAGACTGGCTGGGGAAGATG +
Preference number: 6 (lower is better)
Translates to: GPQDTAIMKPWP*PQGEPDWLGKM
Trigger: CATCTTCCCCAGCCAGTCTGGTTCTCCTTGAGGGCAAGGCCATGGTTTCATTATGGCGGTGTCCTGAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CCA 72 bp GTGGCCTGGACAAGCAGTTGGAGTCCAGACGGAAGCTaGAGTCGGCATACTCAATGCGTACATTGGTGGGGC +
Preference number: 6 (lower is better)
Translates to: VAWTSSWSPDGS*SRHTQCVHWWG
Trigger: GCCCCACCAATGTACGCATTGAGTATGCCGACTCCAGCTTCCGTCTGGACTCCAACTGCTTGTCCAGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS CAA 72 bp GGGCCCAGAAGAATATCTGGGATTGTTGGCCACATCTaGGGGGACGCCGTGCCGTTAGCATCCATCTGCTCC +
Preference number: 6 (lower is better)
Translates to: GPRRISGIVGHI*GDAVPLASICS
Trigger: GGAGCAGATGGATGCTAACGGCACGGCGTCCCCCAAGATGTGGCCAACAATCCCAGATATTCTTCTGGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS TCA 72 bp ACAGCCAGCAAAGGACGAGGTCTAGAAGGCAGTGGATaGGCAGTGAGTGGAGGACCCATGCTTCCCCCATCT +
Preference number: 6 (lower is better)
Translates to: TASKGRGLEGSG*AVSGGPMLPPS
Trigger: AGATGGGGGAAGCATGGGTCCTCCACTCACTGCTCATCCACTGCCTTCTAGACCTCGTCCTTTGCTGGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS GCA 72 bp CTCTTGGAGAGCTGGAGGCCAAATTTTGAGATGACCTaGTTGCTGGGGCCCAGAGCTACCTTCCCAGGAGCA +
Preference number: 6 (lower is better)
Translates to: LLESWRPNFEMT*LLGPRATFPGA
Trigger: TGCTCCTGGGAAGGTAGCTCTGGGCCCCAGCAAGCAGGTCATCTCAAAATTTGGCCTCCAGCTCTCCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CCA 72 bp AGAGTGCTCTGGGCCCAGAAGAATATCTGGGATTGTTaGCCACATCTTGGGGGACGCCGTGCCGTTAGCATC +
Preference number: 6 (lower is better)
Translates to: RVLWAQKNIWDC*PHLGGRRAVSI
Trigger: GATGCTAACGGCACGGCGTCCCCCAAGATGTGGCCAACAATCCCAGATATTCTTCTGGGCCCAGAGCACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CAA 72 bp TGGGCCTCAGGACACCGCCATAATGAAACCATGGCCTaGCCCTCAAGGAGAACCAGACTGGCTGGGGAAGAT +
Preference number: 6 (lower is better)
Translates to: WASGHRHNETMA*PSRRTRLAGED
Trigger: ATCTTCCCCAGCCAGTCTGGTTCTCCTTGAGGGCAAGGCCATGGTTTCATTATGGCGGTGTCCTGAGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CAA 90 bp GAGTGCTCTGGGCCCAGAAGAATATCTGGGATTGTTGGCCACATCTaGGGGGACGCCGTGCCGTTAGCATCCATCTGCTCCAATGAGAAC +
Preference number: 6 (lower is better)
Translates to: ECSGPRRISGIVGHI*GDAVPLASICSNEN
Trigger: GTTCTCATTGGAGCAGATGGATGCTAACGGCACGGCGTCCCCCAAGATGTGGCCAACAATCCCAGATATTCTTCTGGGCCCAGAGCACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CAA 90 bp CTGTCACATCACCATGGCCAGCATCAGACCCTTTGGTTGAAGGGGTaGCTGAGGTTCAGGACAGAGTGGATGGCCAGGAATGCTCAGCTC +
Preference number: 6 (lower is better)
Translates to: LSHHHGQHQTLWLKG*LRFRTEWMARNAQL
Trigger: GAGCTGAGCATTCCTGGCCATCCACTCTGTCCTGAACCTCAGCAACCCCTTCAACCAAAGGGTCTGATGCTGGCCATGGTGATGTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CAA 90 bp CCTGAGCTCCTGTCACATCACCATGGCCAGCATCAGACCCTTTGGTaGAAGGGGTTGCTGAGGTTCAGGACAGAGTGGATGGCCAGGAAT +
Preference number: 6 (lower is better)
Translates to: PELLSHHHGQHQTLW*KGLLRFRTEWMARN
Trigger: ATTCCTGGCCATCCACTCTGTCCTGAACCTCAGCAACCCCTTCAACCAAAGGGTCTGATGCTGGCCATGGTGATGTGACAGGAGCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CAA 90 bp AAATCCCTCTTGGAGAGCTGGAGGCCAAATTTTGAGATGACCTGCTaGCTGGGGCCCAGAGCTACCTTCCCAGGAGCATGGTTGGTGGCT +
Preference number: 6 (lower is better)
Translates to: KSLLESWRPNFEMTC*LGPRATFPGAWLVA
Trigger: AGCCACCAACCATGCTCCTGGGAAGGTAGCTCTGGGCCCCAGCAAGCAGGTCATCTCAAAATTTGGCCTCCAGCTCTCCAAGAGGGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS TCA 72 bp AATCCCTCTTGGAGAGCTGGAGGCCAAATTTTGAGATaGCCTGCTTGCTGGGGCCCAGAGCTACCTTCCCAG +
Preference number: 6 (lower is better)
Translates to: NPSWRAGGQILR*PACWGPELPSQ
Trigger: CTGGGAAGGTAGCTCTGGGCCCCAGCAAGCAGGTCATCTCAAAATTTGGCCTCCAGCTCTCCAAGAGGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS GCA 72 bp AGCCAGATTCCCGAAGGTAGGAGAAGGTCTTGGCTATaGACAGCAGATCCTCCTCTGGGTCCAGCACCTTTG +
Preference number: 6 (lower is better)
Translates to: SQIPEGRRRSWL*TADPPLGPAPL
Trigger: CAAAGGTGCTGGACCCAGAGGAGGATCTGCTGTGCATAGCCAAGACCTTCTCCTACCTTCGGGAATCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS GCA 72 bp CTGTCACGTACTAAGAACGTGCCTTCTGGCATCTTCTaGAGGTGTTGTCGGGCCTCGCTGGCCGTAATGGAA +
Preference number: 6 (lower is better)
Translates to: LSRTKNVPSGIF*RCCRASLAVME
Trigger: TTCCATTACGGCCAGCGAGGCCCGACAACACCTGCAGAAGATGCCAGAAGGCACGTTCTTAGTACGTGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS GCA 72 bp TGGAGTCCAGACGGAAGCTGGAGTCGGCATACTCAATaGGTACATTGGTGGGGCCACGAGTGGTTTTCACTG +
Preference number: 6 (lower is better)
Translates to: WSPDGSWSRHTQ*VHWWGHEWFSL
Trigger: CAGTGAAAACCACTCGTGGCCCCACCAATGTACGCATTGAGTATGCCGACTCCAGCTTCCGTCTGGACTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS CAA 72 bp AGACGGAAGCTGGAGTCGGCATACTCAATGCGTACATaGGTGGGGCCACGAGTGGTTTTCACTGACAGCGTG +
Preference number: 6 (lower is better)
Translates to: RRKLESAYSMRT*VGPRVVFTDSV
Trigger: CACGCTGTCAGTGAAAACCACTCGTGGCCCCACCAATGTACGCATTGAGTATGCCGACTCCAGCTTCCGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS CAA 72 bp CACCATGGCCAGCATCAGACCCTTTGGTTGAAGGGGTaGCTGAGGTTCAGGACAGAGTGGATGGCCAGGAAT +
Preference number: 6 (lower is better)
Translates to: HHGQHQTLWLKG*LRFRTEWMARN
Trigger: ATTCCTGGCCATCCACTCTGTCCTGAACCTCAGCAACCCCTTCAACCAAAGGGTCTGATGCTGGCCATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CAA 72 bp GCTCCTGTCACATCACCATGGCCAGCATCAGACCCTTaGGTTGAAGGGGTTGCTGAGGTTCAGGACAGAGTG +
Preference number: 6 (lower is better)
Translates to: APVTSPWPASDP*VEGVAEVQDRV
Trigger: CACTCTGTCCTGAACCTCAGCAACCCCTTCAACCAAAGGGTCTGATGCTGGCCATGGTGATGTGACAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS TCA 72 bp TCTAAAGGCACTGGCAAGTCTCACCTCCTGTCAGTATaGGCTCCCACCAAGGGCAGGGACCTAATCCACACT +
Preference number: 6 (lower is better)
Translates to: SKGTGKSHLLSV*APTKGRDLIHT
Trigger: AGTGTGGATTAGGTCCCTGCCCTTGGTGGGAGCTCATACTGACAGGAGGTGAGACTTGCCAGTGCCTTTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CCA 72 bp AATACCAGCCAGATTCCCGAAGGTAGGAGAAGGTCTTaGCTATGCACAGCAGATCCTCCTCTGGGTCCAGCA +
Preference number: 6 (lower is better)
Translates to: NTSQIPEGRRRS*LCTADPPLGPA
Trigger: TGCTGGACCCAGAGGAGGATCTGCTGTGCATAGCCAAGACCTTCTCCTACCTTCGGGAATCTGGCTGGTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348721.4
ENST00000443053.6
ENST00000491847.1
CDS CAA 90 bp TTCCACACCTACCCTGGCTGTACTGTGGGATCTTGGAAATCCCTCTaGGAGAGCTGGAGGCCAAATTTTGAGATGACCTGCTTGCTGGGG +
Preference number: 6 (lower is better)
Translates to: FHTYPGCTVGSWKSL*ESWRPNFEMTCLLG
Trigger: CCCCAGCAAGCAGGTCATCTCAAAATTTGGCCTCCAGCTCTCCAAGAGGGATTTCCAAGATCCCACAGTACAGCCAGGGTAGGTGTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CAA 90 bp ACTGGCTCTACTTCCCCAGGAAGACAGCTGCTCCTCCCTCACTCCTaGCAAAATACATCTCCAAGCCTTAGTTCTGGGTCTAGTCCCTGG +
Preference number: 6 (lower is better)
Translates to: TGSTSPGRQLLLPHS*QNTSPSLSSGSSPW
Trigger: CCAGGGACTAGACCCAGAACTAAGGCTTGGAGATGTATTTTGCAAGGAGTGAGGGAGGAGCAGCTGTCTTCCTGGGGAAGTAGAGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS TCA 72 bp TTGGAAATCCCTCTTGGAGAGCTGGAGGCCAAATTTTaGGATGACCTGCTTGCTGGGGCCCAGAGCTACCTT +
Preference number: 6 (lower is better)
Translates to: LEIPLGELEAKF*DDLLAGAQSYL
Trigger: AAGGTAGCTCTGGGCCCCAGCAAGCAGGTCATCTCAAAATTTGGCCTCCAGCTCTCCAAGAGGGATTTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CCA 72 bp ACCCATGCACTGAGAGGTTCAGTAACACCATATTCTTaGATGGCTGGGGTTGGGGGAACTGAGCCGACCAAA +
Preference number: 6 (lower is better)
Translates to: THALRGSVTPYS*MAGVGGTEPTK
Trigger: TTTGGTCGGCTCAGTTCCCCCAACCCCAGCCATCCAAGAATATGGTGTTACTGAACCTCTCAGTGCATGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CAA 72 bp CCCTCTCCACTGTCCCTTACCTCAAGTCTGGGAAATTaGAAGATGAGAGGCAGGAGCCAAGGTCCTTCTCAC +
Preference number: 6 (lower is better)
Translates to: PSPLSLTSSLGN*KMRGRSQGPSH
Trigger: GTGAGAAGGACCTTGGCTCCTGCCTCTCATCTTCAAATTTCCCAGACTTGAGGTAAGGGACAGTGGAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CAA 72 bp GCCAGCCCTACCAGGCTCTACGATCTTGTACAAAGCTaGCTCTTCACTGGGCTTCAGTTTCCCTTTTCCGCA +
Preference number: 6 (lower is better)
Translates to: ASPTRLYDLVQS*LFTGLQFPFSA
Trigger: TGCGGAAAAGGGAAACTGAAGCCCAGTGAAGAGCAAGCTTTGTACAAGATCGTAGAGCCTGGTAGGGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CAA 90 bp CCCTGGCAAGCCAGCCCTACCAGGCTCTACGATCTTGTACAAAGCTaGCTCTTCACTGGGCTTCAGTTTCCCTTTTCCGCAATAAAGGGT +
Preference number: 6 (lower is better)
Translates to: PWQASPTRLYDLVQS*LFTGLQFPFSAIKG
Trigger: ACCCTTTATTGCGGAAAAGGGAAACTGAAGCCCAGTGAAGAGCAAGCTTTGTACAAGATCGTAGAGCCTGGTAGGGCTGGCTTGCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CAA 90 bp ATCAGCATCCCCTCTCCACTGTCCCTTACCTCAAGTCTGGGAAATTaGAAGATGAGAGGCAGGAGCCAAGGTCCTTCTCACATTGGGATC +
Preference number: 6 (lower is better)
Translates to: ISIPSPLSLTSSLGN*KMRGRSQGPSHIGI
Trigger: GATCCCAATGTGAGAAGGACCTTGGCTCCTGCCTCTCATCTTCAAATTTCCCAGACTTGAGGTAAGGGACAGTGGAGAGGGGATGCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS TCA 72 bp AGGGACCTAGGTCCACACTGGCCAGGACTTAGAGACTaGAATAATCCCCTACCCATACAAGTCAGCCTATCC +
Preference number: 6 (lower is better)
Translates to: RDLGPHWPGLRD*NNPLPIQVSLS
Trigger: GGATAGGCTGACTTGTATGGGTAGGGGATTATTTCAGTCTCTAAGTCCTGGCCAGTGTGGACCTAGGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS GCA 72 bp CCAGCCCTACCAGGCTCTACGATCTTGTACAAAGCTTaGTCTTCACTGGGCTTCAGTTTCCCTTTTCCGCAA +
Preference number: 6 (lower is better)
Translates to: PALPGSTILYKA*SSLGFSFPFPQ
Trigger: TTGCGGAAAAGGGAAACTGAAGCCCAGTGAAGAGCAAGCTTTGTACAAGATCGTAGAGCCTGGTAGGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CCA 72 bp TGTACTGTGGGATCTTGGAAATCCCTCTTGGAGAGCTaGAGGCCAAATTTTGAGATGACCTGCTTGCTGGGG +
Preference number: 6 (lower is better)
Translates to: CTVGSWKSLLES*RPNFEMTCLLG
Trigger: CCCCAGCAAGCAGGTCATCTCAAAATTTGGCCTCCAGCTCTCCAAGAGGGATTTCCAAGATCCCACAGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CAA 72 bp TGGCTGGTGTGTTCTAGGTACATGTGTGTGCCCGCTTaGGAGCGCAGCAGTCTAAAACTTTGTTCCCTGACA +
Preference number: 6 (lower is better)
Translates to: WLVCSRYMCVPA*ERSSLKLCSLT
Trigger: TGTCAGGGAACAAAGTTTTAGACTGCTGCGCTCCAAAGCGGGCACACACATGTACCTAGAACACACCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443053.6
ENST00000491847.1
CDS CAA 72 bp TACCCTGGCTGTACTGTGGGATCTTGGAAATCCCTCTaGGAGAGCTGGAGGCCAAATTTTGAGATGACCTGC +
Preference number: 6 (lower is better)
Translates to: YPGCTVGSWKSL*ESWRPNFEMTC
Trigger: GCAGGTCATCTCAAAATTTGGCCTCCAGCTCTCCAAGAGGGATTTCCAAGATCCCACAGTACAGCCAGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CCA 72 bp CACCACAGCCTGACAAAAACTTTTCCACACCTACCCTaGCTGTACTGTGGGATCTTGGAAATCCCTCTTGGA +
Preference number: 6 (lower is better)
Translates to: HHSLTKTFPHLP*LYCGILEIPLG
Trigger: TCCAAGAGGGATTTCCAAGATCCCACAGTACAGCCAGGGTAGGTGTGGAAAAGTTTTTGTCAGGCTGTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CCA 72 bp CAGGCTCTACGATCTTGTACAAAGCTTGCTCTTCACTaGGCTTCAGTTTCCCTTTTCCGCAATAAAGGGTCC +
Preference number: 6 (lower is better)
Translates to: QALRSCTKLALH*ASVSLFRNKGS
Trigger: GGACCCTTTATTGCGGAAAAGGGAAACTGAAGCCCAGTGAAGAGCAAGCTTTGTACAAGATCGTAGAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS GCA 72 bp TTTCCCTTTTCCGCAATAAAGGGTCCCACCAACCCATaGACTGAGAGGTTCAGTAACACCATATTCTTGGAT +
Preference number: 6 (lower is better)
Translates to: FPFSAIKGPTNP*TERFSNTIFLD
Trigger: ATCCAAGAATATGGTGTTACTGAACCTCTCAGTGCATGGGTTGGTGGGACCCTTTATTGCGGAAAAGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491847.1
CDS CCA 72 bp ATGAAACCATGGCCTTGCCCTCAAGGAGAACCAGACTaGCTGGGGAAGATGACACTAAGAGTAATTATAATG +
Preference number: 6 (lower is better)
Translates to: MKPWPCPQGEPD*LGKMTLRVIIM
Trigger: CATTATAATTACTCTTAGTGTCATCTTCCCCAGCCAGTCTGGTTCTCCTTGAGGGCAAGGCCATGGTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491847.1