Pregenerated sensors for CISD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000122873Ensembl transcript IDs: ENST00000333926.6, ENST00000464703.5, ENST00000488388.2, ENST00000489785.5
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CTCTGTTTTGCTGACATGCATACTTATCTTAAAAAGAAGGAGGTGGGCAAAGAAAATCCTCAGTTCAAGTaGTTACCATTCCTTGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: LCFADMHTYLKKKEVGKENPQFK*LPFLGP Trigger: TGGCCCAAGGAATGGTAAGCACTTGAACTGAGGATT...TTCTTTGCCCACCTCCTTCTTTTTAAGATAAGTATGCATGTCAGCAAAACAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000333926.6 |
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| 3UTR-3UTR TCA 90 bp | CTCTGTTTTGCTGACATGCATACTTATCTTAAAAAGAAGGAGGTGGGCAAAGAAAACTTCACGACAAGCTaGTTTGCAGCATCAAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: LCFADMHTYLKKKEVGKENFTTS*FAASKV Trigger: CACTTTTGATGCTGCAAATCAGCTTGTCGTGAAGTT...TTCTTTGCCCACCTCCTTCTTTTTAAGATAAGTATGCATGTCAGCAAAACAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000333926.6 |
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| 3UTR-3UTR TCA 90 bp | CTCTGTTTTGCTGACATGCATACTTATCTTAAAAAGAAGGAGGTGGGCAAAGAAATCTTCCCACGCCTTTaGTCTAATCTTGTGACTACT | + |
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Preference number: 2 (lower is better) Translates to: LCFADMHTYLKKKEVGKEIFPRL*SNLVTT Trigger: AGTAGTCACAAGATTAGATCAAAGGCGTGGGAAGAT...TTCTTTGCCCACCTCCTTCTTTTTAAGATAAGTATGCATGTCAGCAAAACAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000333926.6 |
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| 3UTR-3UTR CCA 90 bp | GTTAGAAGGATGTCCCTTTATCAGAAACACTGGGAGTTGATGCATTTATTTTTCGTGCTTACCATTCCTTaGGCCAGAATTCTGGAACAT | + |
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Preference number: 2 (lower is better) Translates to: VRRMSLYQKHWELMHLFFVLTIP*ARILEH Trigger: ATGTTCCAGAATTCTGGCCCAAGGAATGGTAAGCAC...GAAAAATAAATGCATCAACTCCCAGTGTTTCTGATAAAGGGACATCCTTCTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333926.6 |
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| 3UTR-3UTR GCA 90 bp | GTTAGAAGGATGTCCCTTTATCAGAAACACTGGGAGTTGATGCATTTATTTTTCATAACCCACAGGCCATaGAGGTTGGTTTTTCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: VRRMSLYQKHWELMHLFFITHRP*RLVFPF Trigger: AAAAGGAAAAACCAACCTGCATGGCCTGTGGGTTAT...GAAAAATAAATGCATCAACTCCCAGTGTTTCTGATAAAGGGACATCCTTCTAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000333926.6 |
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| 3UTR-3UTR GCA 90 bp | ATCATATATTACATAGGATATGCTGCTGTCAGGTTTGATTCCTGTCAAGGTAAACACGACAAGCTGATTTaGAGCATCAAAAGTGTCCAT | + |
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Preference number: 2 (lower is better) Translates to: IIYYIGYAAVRFDSCQGKHDKLI*SIKSVH Trigger: ATGGACACTTTTGATGCTGCAAATCAGCTTGTCGTG...TTTACCTTGACAGGAATCAAACCTGACAGCAGCATATCCTATGTAATATATGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333926.6 |
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| 3UTR-3UTR TCA 90 bp | GTTAGAAGGATGTCCCTTTATCAGAAACACTGGGAGTTGATGCATTTATTTTTCTTTCTGAATCAACAATaGATGCAATGTTTCTGCTCG | + |
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Preference number: 2 (lower is better) Translates to: VRRMSLYQKHWELMHLFFFLNQQ*MQCFCS Trigger: CGAGCAGAAACATTGCATTCATTGTTGATTCAGAAA...GAAAAATAAATGCATCAACTCCCAGTGTTTCTGATAAAGGGACATCCTTCTAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333926.6 |
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| 3UTR-3UTR TCA 90 bp | GTTAGAAGGATGTCCCTTTATCAGAAACACTGGGAGTTGATGCATTTATTTTTCTCATCTTTAAAAGCATaGTTGCTCTGTTTTGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: VRRMSLYQKHWELMHLFFSSLKA*LLCFAD Trigger: GTCAGCAAAACAGAGCAATCATGCTTTTAAAGATGA...GAAAAATAAATGCATCAACTCCCAGTGTTTCTGATAAAGGGACATCCTTCTAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000333926.6 |
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| 3UTR-3UTR CAA 90 bp | CTCTGTTTTGCTGACATGCATACTTATCTTAAAAAGAAGGAGGTGGGCAAAGAATCACGACAAGCTGATTaGCAGCATCAAAAGTGTCCA | + |
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Preference number: 3 (lower is better) Translates to: LCFADMHTYLKKKEVGKESRQAD*QHQKCP Trigger: TGGACACTTTTGATGCTGCAAATCAGCTTGTCGTGA...TTCTTTGCCCACCTCCTTCTTTTTAAGATAAGTATGCATGTCAGCAAAACAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000333926.6 |
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| 3UTR-3UTR CAA 90 bp | GTTAGAAGGATGTCCCTTTATCAGAAACACTGGGAGTTGATGCATTTATTTTTCAGTGCTTACCATTCCTaGGGCCAGAATTCTGGAACA | + |
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Preference number: 3 (lower is better) Translates to: VRRMSLYQKHWELMHLFFSAYHS*GQNSGT Trigger: TGTTCCAGAATTCTGGCCCAAGGAATGGTAAGCACT...GAAAAATAAATGCATCAACTCCCAGTGTTTCTGATAAAGGGACATCCTTCTAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333926.6 |
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| 3UTR-3UTR CAA 90 bp | GTTAGAAGGATGTCCCTTTATCAGAAACACTGGGAGTTGATGCATTTATTTTTCATGCTGCTGTCAGGTTaGATTCCTGTCAAGGTAAAT | + |
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Preference number: 3 (lower is better) Translates to: VRRMSLYQKHWELMHLFFMLLSG*IPVKVN Trigger: ATTTACCTTGACAGGAATCAAACCTGACAGCAGCAT...GAAAAATAAATGCATCAACTCCCAGTGTTTCTGATAAAGGGACATCCTTCTAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333926.6 |
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| CDS-3UTR GCA 90 bp | CTCTGTTTTGCTGACATGCATACTTATCTTAAAAAGAAGGAGGTGGGCAAAGAACACGACAAGCTGATTTaGAGCATCAAAAGTGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: LCFADMHTYLKKKEVGKEHDKLI*SIKSVH Trigger: ATGGACACTTTTGATGCTGCAAATCAGCTTGTCGTG...TTCTTTGCCCACCTCCTTCTTTTTAAGATAAGTATGCATGTCAGCAAAACAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000333926.6 |
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| CDS-3UTR GCA 90 bp | CTCTGTTTTGCTGACATGCATACTTATCTTAAAAAGAAGGAGGTGGGCAAAGAAATAACCCACAGGCCATaGAGGTTGGTTTTTCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: LCFADMHTYLKKKEVGKEITHRP*RLVFPF Trigger: AAAAGGAAAAACCAACCTGCATGGCCTGTGGGTTAT...TTCTTTGCCCACCTCCTTCTTTTTAAGATAAGTATGCATGTCAGCAAAACAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000333926.6 |
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| CDS-3UTR CCA 90 bp | GTTAGAAGGATGTCCCTTTATCAGAAACACTGGGAGTTGATGCATTTATTTTTCTATAGTTTTGAGAACTaGTACCAGGTTCCCCCTGAC | + |
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Preference number: 4 (lower is better) Translates to: VRRMSLYQKHWELMHLFFYSFEN*YQVPPD Trigger: GTCAGGGGGAACCTGGTACCAGTTCTCAAAACTATA...GAAAAATAAATGCATCAACTCCCAGTGTTTCTGATAAAGGGACATCCTTCTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000333926.6 |
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| CDS-3UTR TCA 90 bp | GTTAGAAGGATGTCCCTTTATCAGAAACACTGGGAGTTGATGCATTTATTTTTCATCTTCCCACGCCTTTaGTCTAATCTTGTGACTACT | + |
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Preference number: 4 (lower is better) Translates to: VRRMSLYQKHWELMHLFFIFPRL*SNLVTT Trigger: AGTAGTCACAAGATTAGATCAAAGGCGTGGGAAGAT...GAAAAATAAATGCATCAACTCCCAGTGTTTCTGATAAAGGGACATCCTTCTAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333926.6 |
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| CDS-3UTR CCA 90 bp | ATCATATATTACATAGGATATGCTGCTGTCAGGTTTGATTCCTGTCAAGGTAAAGTGCTTACCATTCCTTaGGCCAGAATTCTGGAACAT | + |
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Preference number: 4 (lower is better) Translates to: IIYYIGYAAVRFDSCQGKVLTIP*ARILEH Trigger: ATGTTCCAGAATTCTGGCCCAAGGAATGGTAAGCAC...TTTACCTTGACAGGAATCAAACCTGACAGCAGCATATCCTATGTAATATATGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333926.6 |
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| 3UTR CAA 72 bp | TCCTTCAAAATCCTCAGTTCAAGTGCTTACCATTCCTaGGGCCAGAATTCTGGAACATTAGATTTTAAGACA | + |
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Preference number: 4 (lower is better) Translates to: SFKILSSSAYHS*GQNSGTLDFKT Trigger: TGTCTTAAAATCTAATGTTCCAGAATTCTGGCCCAAGGAATGGTAAGCACTTGAACTGAGGATTTTGAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000333926.6 |
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| CDS-3UTR TCA 90 bp | ATCATATATTACATAGGATATGCTGCTGTCAGGTTTGATTCCTGTCAAGGTAAATTTCTGAATCAACAATaGATGCAATGTTTCTGCTCG | + |
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Preference number: 4 (lower is better) Translates to: IIYYIGYAAVRFDSCQGKFLNQQ*MQCFCS Trigger: CGAGCAGAAACATTGCATTCATTGTTGATTCAGAAA...TTTACCTTGACAGGAATCAAACCTGACAGCAGCATATCCTATGTAATATATGAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333926.6 |
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| CDS GCA 90 bp | AGCCCCTTTTCTGCTCTAAACTGCCCTCTCCAGCCCACCATCAACTaGCATAGAATCATAATGTTTCTCCTCTTCTATGAGGAGAGGGGG | + |
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Preference number: 5 (lower is better) Translates to: SPFSALNCPLQPTIN*HRIIMFLLFYEERG Trigger: CCCCCTCTCCTCATAGAAGAGGAGAAACATTATGATTCTATGGCAGTTGATGGTGGGCTGGAGAGGGCAGTTTAGAGCAGAAAAGGGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489785.5 |
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| CDS CCA 90 bp | TTAGTCTGTATTCTTTTGCTGTCCTTGTTTGAACTGCCTCCTAGGTaGCCGTCATACAACTCAGCAAGTGATGTAACCAACCTTTTTGGA | + |
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Preference number: 5 (lower is better) Translates to: LVCILLLSLFELPPR*PSYNSASDVTNLFG Trigger: TCCAAAAAGGTTGGTTACATCACTTGCTGAGTTGTATGACGGCCACCTAGGAGGCAGTTCAAACAAGGACAGCAAAAGAATACAGACTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000488388.2 |
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| CDS-3UTR CAA 90 bp | TCCTTCAAAATCCTCAGTTCAAGTGCTTACCATTCCTTGGGCCAGAATTCTGGATATAATCCTATAGTTTaGAGAACTGGTACCAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: SFKILSSSAYHSLGQNSGYNPIV*RTGTRF Trigger: GAACCTGGTACCAGTTCTCAAAACTATAGGATTATA...TCCAGAATTCTGGCCCAAGGAATGGTAAGCACTTGAACTGAGGATTTTGAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333926.6 |
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| CDS-3UTR CAA 90 bp | ATCATATATTACATAGGATATGCTGCTGTCAGGTTTGATTCCTGTCAAGGTAAAATGCTGCTGTCAGGTTaGATTCCTGTCAAGGTAAAT | + |
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Preference number: 5 (lower is better) Translates to: IIYYIGYAAVRFDSCQGKMLLSG*IPVKVN Trigger: ATTTACCTTGACAGGAATCAAACCTGACAGCAGCAT...TTTACCTTGACAGGAATCAAACCTGACAGCAGCATATCCTATGTAATATATGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333926.6 |
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| CDS-3UTR CAA 90 bp | ATCATATATTACATAGGATATGCTGCTGTCAGGTTTGATTCCTGTCAAGGTAAACATGATTGCTCTGTTTaGCTGACATGCATACTTATC | + |
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Preference number: 5 (lower is better) Translates to: IIYYIGYAAVRFDSCQGKHDCSV*LTCILI Trigger: GATAAGTATGCATGTCAGCAAAACAGAGCAATCATG...TTTACCTTGACAGGAATCAAACCTGACAGCAGCATATCCTATGTAATATATGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333926.6 |
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| CDS CAA 72 bp | CTGCATAATCTGGTTAGCCTCAGCCTCAGAGGAGAGTaGTCTATTCCCAGCATGGAGTGGGCTCGTACGCTG | + |
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Preference number: 6 (lower is better) Translates to: LHNLVSLSLRGE*SIPSMEWARTL Trigger: CAGCGTACGAGCCCACTCCATGCTGGGAATAGACAACTCTCCTCTGAGGCTGAGGCTAACCAGATTATGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464703.5 |
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| CDS CAA 90 bp | AAGAAAGTTCTGCATAATCTGGTTAGCCTCAGCCTCAGAGGAGAGTaGTCTATTCCCAGCATGGAGTGGGCTCGTACGCTGGAACTGGAA | + |
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Preference number: 6 (lower is better) Translates to: KKVLHNLVSLSLRGE*SIPSMEWARTLELE Trigger: TTCCAGTTCCAGCGTACGAGCCCACTCCATGCTGGGAATAGACAACTCTCCTCTGAGGCTGAGGCTAACCAGATTATGCAGAACTTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464703.5 |
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| CDS CAA 72 bp | ACTGCTGCGATCCATTCAACCCAGCTCCAGGCAATGTaGGAGAGAAGAAAGTTCTGCATAATCTGGTTAGCC | + |
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Preference number: 6 (lower is better) Translates to: TAAIHSTQLQAM*ERRKFCIIWLA Trigger: GGCTAACCAGATTATGCAGAACTTTCTTCTCTCCAACATTGCCTGGAGCTGGGTTGAATGGATCGCAGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464703.5 |
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| CDS GCA 72 bp | TCTGCTCTAAACTGCCCTCTCCAGCCCACCATCAACTaGCATAGAATCATAATGTTTCTCCTCTTCTATGAG | + |
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Preference number: 6 (lower is better) Translates to: SALNCPLQPTIN*HRIIMFLLFYE Trigger: CTCATAGAAGAGGAGAAACATTATGATTCTATGGCAGTTGATGGTGGGCTGGAGAGGGCAGTTTAGAGCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489785.5 |
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| CDS CCA 72 bp | CAGGCAATGTTGGAGAGAAGAAAGTTCTGCATAATCTaGTTAGCCTCAGCCTCAGAGGAGAGTTGTCTATTC | + |
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Preference number: 6 (lower is better) Translates to: QAMLERRKFCII*LASASEESCLF Trigger: GAATAGACAACTCTCCTCTGAGGCTGAGGCTAACCAGATTATGCAGAACTTTCTTCTCTCCAACATTGCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464703.5 |
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| CDS CCA 72 bp | ATTCTTTTGCTGTCCTTGTTTGAACTGCCTCCTAGGTaGCCGTCATACAACTCAGCAAGTGATGTAACCAAC | + |
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Preference number: 6 (lower is better) Translates to: ILLLSLFELPPR*PSYNSASDVTN Trigger: GTTGGTTACATCACTTGCTGAGTTGTATGACGGCCACCTAGGAGGCAGTTCAAACAAGGACAGCAAAAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488388.2 |
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