RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CIRBP (Homo sapiens)

Ensembl gene IDs: ENSG00000099622

Ensembl transcript IDs: ENST00000320936.9, ENST00000413636.6, ENST00000444172.6, ENST00000585630.5, ENST00000585913.5, ENST00000585914.5, ENST00000586472.5, ENST00000586548.5, ENST00000586636.5, ENST00000586773.5, ENST00000587169.5, ENST00000587323.5, ENST00000587896.6, ENST00000588030.5, ENST00000588090.5, ENST00000588230.5, ENST00000588344.2, ENST00000588411.5, ENST00000589161.1, ENST00000589235.5, ENST00000589266.5, ENST00000589686.5, ENST00000589710.5, ENST00000590171.1, ENST00000590188.5, ENST00000590347.5, ENST00000590704.5, ENST00000591055.5, ENST00000591097.5, ENST00000591376.5, ENST00000591622.1, ENST00000591659.5, ENST00000591935.5, ENST00000592051.1, ENST00000592234.5, ENST00000592412.5, ENST00000592467.1, ENST00000592815.5, ENST00000593048.5, ENST00000593093.5, ENST00000593128.5, ENST00000593283.5, ENST00000628979.2

Found 1478 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGCGCGGGCTCCAGGCGGGGGACCCGGCGCTCCCGGGAGGCGCTaGCCTGCACCCAACACACACCGAAAGGCGCCCGCCATGGGGCCA +
Preference number: 1 (lower is better)
Translates to: QARAPGGGPGAPGRR*PAPNTHRKAPAMGP
Trigger: TGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGCGCCGGGTCCCCCGCCTGGAGCCCGCGCCTG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
3UTR GCA 90 bp GCGGGCTCCAGGCGGGGGACCCGGCGCTCCCGGGAGGCGCTGCCCTaGACCCAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGT +
Preference number: 1 (lower is better)
Translates to: AGSRRGTRRSREALP*TQHTPKGARHGAIG
Trigger: ACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGCGCCGGGTCCCCCGCCTGGAGCCCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
3UTR TCA 90 bp CTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTCC +
Preference number: 1 (lower is better)
Translates to: LPAHRSPCSRRDSRP*ARTSLAKRLRGQAS
Trigger: GGAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR TCA 90 bp CTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCGAAGCGCAGGGGACAAGCCTCCTGG +
Preference number: 1 (lower is better)
Translates to: LPAHRSPCSRRDSRP*ARTSLAKRRGQASW
Trigger: CCAGGAGGCTTGTCCCCTGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585913.5
3UTR TCA 90 bp CTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCGAAGCGCCTCCTGGAAGGAGGAGGA +
Preference number: 1 (lower is better)
Translates to: LPAHRSPCSRRDSRP*ARTSLAKRLLEGGG
Trigger: TCCTCCTCCTTCCAGGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
3UTR TCA 90 bp CTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCGAAGCGCCTCTTACAGGGGACAAGC +
Preference number: 1 (lower is better)
Translates to: LPAHRSPCSRRDSRP*ARTSLAKRLLQGTS
Trigger: GCTTGTCCCCTGTAAGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585914.5
3UTR GCA 90 bp CAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTaGCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCT +
Preference number: 1 (lower is better)
Translates to: QGSTSLWARTGRPVS*RRTAARAPGETRGP
Trigger: AGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR GCA 90 bp CTGCACCCAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTaGGGGAGAGCAGGACTCACTGAAACGCCCAGGTGCCGCCCGGGA +
Preference number: 1 (lower is better)
Translates to: LHPTHTERRPPWGHR*GRAGLTETPRCRPG
Trigger: TCCCGGGCGGCACCTGGGCGTTTCAGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
3UTR CCA 90 bp TCTGCTCCTTGCCCAGCCAGTCTCATCTCAGCTCCCCCAGGGACCTaGGACCCGGGACGGAAGCTGGCCATCCCGCAACCACCCCTGTGC +
Preference number: 1 (lower is better)
Translates to: SAPCPASLISAPPGT*DPGRKLAIPQPPLC
Trigger: GCACAGGGGTGGTTGCGGGATGGCCAGCTTCCGTCCCGGGTCCCAGGTCCCTGGGGGAGCTGAGATGAGACTGGCTGGGCAAGGAGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR CCA 90 bp GGAGGCGCTGCCCTGCACCCAACACACACCGAAAGGCGCCCGCCATaGGGCCATAGGTGCGGGAGAGCAGGACTCACTGAAACGCCCAGG +
Preference number: 1 (lower is better)
Translates to: GGAALHPTHTERRPP*GHRCGRAGLTETPR
Trigger: CCTGGGCGTTTCAGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
3UTR TCA 90 bp CCCACAGCCGAGGGAGGCTGGCCTGCGGCCACACATGCACCTAGCTaGCTGCCCAGCGGGCCCTCGCTCTCCCTTGCCTTTTTGGTCAGT +
Preference number: 1 (lower is better)
Translates to: PTAEGGWPAATHAPS*LPSGPSLSLAFLVS
Trigger: ACTGACCAAAAAGGCAAGGGAGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGTGGCCGCAGGCCAGCCTCCCTCGGCTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR GCA 90 bp TGTGACCTCAGGCTCCGTCACAGGCCAGCATGCCCAGGGCGGGTCTaGACCTTGGCGCAGCTGGAGCCAGCTACCCGTATGGGATGGAGC +
Preference number: 1 (lower is better)
Translates to: CDLRLRHRPACPGRV*TLAQLEPATRMGWS
Trigger: GCTCCATCCCATACGGGTAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCATGCTGGCCTGTGACGGAGCCTGAGGTCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR GCA 90 bp TGGGGCCATAGGTGCGGGAGAGCAGGACTCACTGAAACGCCCAGGTaGCGCCCGGGACAGGGCTCAGCGCCACATGCCACTCTTCCCGAA +
Preference number: 1 (lower is better)
Translates to: WGHRCGRAGLTETPR*RPGQGSAPHATLPE
Trigger: TTCGGGAAGAGTGGCATGTGGCGCTGAGCCCTGTCCCGGGCGGCACCTGGGCGTTTCAGTGAGTCCTGCTCTCCCGCACCTATGGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
3UTR CCA 90 bp TCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTaGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGG +
Preference number: 1 (lower is better)
Translates to: SNPTFTGLHIVVGKD*PPRKLPAHRSPCSR
Trigger: CCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR CCA 90 bp CCCTGTGCTTGGGCCGGCCTCCCCCTCACCTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCACTCCTGGACTCGAACCGGTTCCCCC +
Preference number: 1 (lower is better)
Translates to: PCAWAGLPLTCYSSL*SLRSPHSWTRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCAGGTGAGGGGGAGGCCGGCCCAAGCACAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR GCA 90 bp CAGCCGAGGGAGGCTGGCCTGCGGCCACACATGCACCTAGCTGACTaGCCAGCGGGCCCTCGCTCTCCCTTGCCTTTTTGGTCAGTCTCA +
Preference number: 1 (lower is better)
Translates to: QPREAGLRPHMHLAD*PAGPRSPLPFWSVS
Trigger: TGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGTGGCCGCAGGCCAGCCTCCCTCGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR GCA 90 bp CAGTCCAGGTCAGCGTCAGGTGCACGTCCACTGTCCCTGCTAAGCTaGCCGCACAGTCCAGCCCTCTGGCCACCACTGCCAGAAGCCTCC +
Preference number: 1 (lower is better)
Translates to: QSRSASGARPLSLLS*PHSPALWPPLPEAS
Trigger: GGAGGCTTCTGGCAGTGGTGGCCAGAGGGCTGGACTGTGCGGGCAGCTTAGCAGGGACAGTGGACGTGCACCTGACGCTGACCTGGACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CCA 90 bp GTCACAGGCCAGCATGCCCAGGGCGGGTCTGCACCTTGGCGCAGCTaGAGCCAGCTACCCGTATGGGATGGAGCTATGTGGGCCAGTGTG +
Preference number: 1 (lower is better)
Translates to: VTGQHAQGGSAPWRS*SQLPVWDGAMWASV
Trigger: CACACTGGCCCACATAGCTCCATCCCATACGGGTAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCATGCTGGCCTGTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CCA 90 bp TCAGGCTCCGTCACAGGCCAGCATGCCCAGGGCGGGTCTGCACCTTaGCGCAGCTGGAGCCAGCTACCCGTATGGGATGGAGCTATGTGG +
Preference number: 1 (lower is better)
Translates to: SGSVTGQHAQGGSAP*RSWSQLPVWDGAMW
Trigger: CCACATAGCTCCATCCCATACGGGTAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCATGCTGGCCTGTGACGGAGCCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR TCA 90 bp GCCCTGGGATGCCACGTGCCTCTGCTCTCTGGCCTGCTTCTAGACTaGGGCAGTCCAGGTCAGCGTCAGGTGCACGTCCACTGTCCCTGC +
Preference number: 1 (lower is better)
Translates to: ALGCHVPLLSGLLLD*GSPGQRQVHVHCPC
Trigger: GCAGGGACAGTGGACGTGCACCTGACGCTGACCTGGACTGCCTCAGTCTAGAAGCAGGCCAGAGAGCAGAGGCACGTGGCATCCCAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR GCA 90 bp CTCTCAGGCCACCCTTCCCCGAGTCCTGGCCGGGCCCCTTCAACCTaGCAAAGCAAAGCAGCGTTACTCCCAACGTCCTCCACAGGGCTC +
Preference number: 1 (lower is better)
Translates to: LSGHPSPSPGRAPST*QSKAALLPTSSTGL
Trigger: GAGCCCTGTGGAGGACGTTGGGAGTAACGCTGCTTTGCTTTGGCAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGGTGGCCTGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR TCA 90 bp GGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTGCTCTCAGGCCACCCTTCCCCGAGT +
Preference number: 1 (lower is better)
Translates to: GCLQLLFQVKSLLGQ*PQRSSLLSGHPSPS
Trigger: ACTCGGGGAAGGGTGGCCTGAGAGCAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
ENST00000592234.5
3UTR TCA 90 bp CCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTaGCTTACCGTAACTGTCATAACTGTCTCTGTAGGACCCGCCCGA +
Preference number: 1 (lower is better)
Translates to: PSSHRRPQQRGALGV*LTVTVITVSVGPAR
Trigger: TCGGGCGGGTCCTACAGAGACAGTTATGACAGTTACGGTAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR GCA 90 bp GAATGTCCTGAGCAGTCTCCTCTCCTCTTGGCCTGGGTCCCCACCTaGCTCTGCTCCTTGCCCAGCCAGTCTCATCTCAGCTCCCCCAGG +
Preference number: 1 (lower is better)
Translates to: ECPEQSPLLLAWVPT*LCSLPSQSHLSSPR
Trigger: CCTGGGGGAGCTGAGATGAGACTGGCTGGGCAAGGAGCAGAGGCAGGTGGGGACCCAGGCCAAGAGGAGAGGAGACTGCTCAGGACATTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR CCA 90 bp TGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTaGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCC +
Preference number: 1 (lower is better)
Translates to: WPFIRIRLSQGSTSL*ARTGRPVSCRRTAA
Trigger: GGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR TCA 90 bp GACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGTGACCCCAGAGGTCATCGCTGCTCT +
Preference number: 1 (lower is better)
Translates to: DKPPGQAAASSSCSR*SPSWDSDPRGHRCS
Trigger: AGAGCAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
ENST00000592234.5
3UTR GCA 90 bp TCTGCTGGGCCTCCCTTTCTAGCTCTGCAGGCCCCAGGGAAGGCTTaGAGACCCGCTGCTTCTCCACCTTCTCTCTCTGCTCAGGTCTGG +
Preference number: 1 (lower is better)
Translates to: SAGPPFLALQAPGKA*RPAASPPSLSAQVW
Trigger: CCAGACCTGAGCAGAGAGAGAAGGTGGAGAAGCAGCGGGTCTGCAAGCCTTCCCTGGGGCCTGCAGAGCTAGAAAGGGAGGCCCAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR TCA 90 bp AGAACTCGTGAAGCAACAGCAGAACTAGCTAACCGGCTGGCCGTCTaGGGTCGCCCTGGGATGCCACGTGCCTCTGCTCTCTGGCCTGCT +
Preference number: 1 (lower is better)
Translates to: RTREATAELANRLAV*GRPGMPRASALWPA
Trigger: AGCAGGCCAGAGAGCAGAGGCACGTGGCATCCCAGGGCGACCTCAGACGGCCAGCCGGTTAGCTAGTTCTGCTGTTGCTTCACGAGTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR GCA 90 bp CGGCAGAGCCACCACGGTACCCACGGGATCGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGATCTGCCGTCCATCTACAGACTTCC +
Preference number: 1 (lower is better)
Translates to: RQSHHGTHGIGCLTT*LPGLLGSAVHLQTS
Trigger: GGAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTACCGTGGTGGCTCTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
3UTR GCA 90 bp GCAGACCCGCTGCTTCTCCACCTTCTCTCTCTGCTCAGGTCTGGCTaGAGGAGCCCGCAGCAAGGAGTGTGTGGTGCAATGCAAGGGAAT +
Preference number: 1 (lower is better)
Translates to: ADPLLLHLLSLLRSG*RSPQQGVCGAMQGN
Trigger: ATTCCCTTGCATTGCACCACACACTCCTTGCTGCGGGCTCCTGCAGCCAGACCTGAGCAGAGAGAGAAGGTGGAGAAGCAGCGGGTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CCA 90 bp CCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTC +
Preference number: 1 (lower is better)
Translates to: PHATLPESTYRGQAS*ASGCLQLLFQVKSL
Trigger: GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
3UTR TCA 90 bp TGGCCGGGCCCCTTCAACCTCGAATTACAGGGCTATTTCCACATATaGGCTAGCCAAGGGAGCAGCTTGCGTCTCAGAGGGTTCTGTTGG +
Preference number: 1 (lower is better)
Translates to: WPGPFNLELQGYFHI*ASQGSSLRLRGFCW
Trigger: CCAACAGAACCCTCTGAGACGCAAGCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGCCCTGTAATTCGAGGTTGAAGGGGCCCGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444172.6
ENST00000585914.5
3UTR TCA 90 bp CACTGTAGCCACCACTCTGACTCCGGCTGCAAGACAGACAAACGTTaGGTACCGGAAGGTACCCGTCTACTTCTGCTCTGCCACAACAGG +
Preference number: 1 (lower is better)
Translates to: HCSHHSDSGCKTDKR*VPEGTRLLLLCHNR
Trigger: CCTGTTGTGGCAGAGCAGAAGTAGACGGGTACCTTCCGGTACTCAACGTTTGTCTGTCTTGCAGCCGGAGTCAGAGTGGTGGCTACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR GCA 90 bp TCTGCTCAGGTCTGGCTGCAGGAGCCCGCAGCAAGGAGTGTGTGGTaGAATGCAAGGGAATTGTCAGAGCAAGGTTCATTTCACACGGTC +
Preference number: 1 (lower is better)
Translates to: SAQVWLQEPAARSVW*NARELSEQGSFHTV
Trigger: GACCGTGTGAAATGAACCTTGCTCTGACAATTCCCTTGCATTGCACCACACACTCCTTGCTGCGGGCTCCTGCAGCCAGACCTGAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CCA 90 bp CTCTCTGCTCAGGTCTGGCTGCAGGAGCCCGCAGCAAGGAGTGTGTaGTGCAATGCAAGGGAATTGTCAGAGCAAGGTTCATTTCACACG +
Preference number: 1 (lower is better)
Translates to: LSAQVWLQEPAARSV*CNARELSEQGSFHT
Trigger: CGTGTGAAATGAACCTTGCTCTGACAATTCCCTTGCATTGCACCACACACTCCTTGCTGCGGGCTCCTGCAGCCAGACCTGAGCAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR TCA 90 bp CTAGTAACGAGGCCATCCCGGCGTCAGAAGCGGTCAGGCTGGGTTTaGCAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGG +
Preference number: 1 (lower is better)
Translates to: LVTRPSRRQKRSGWV*QDQNRNDYESGNTR
Trigger: CCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGCTTCTGACGCCGGGATGGCCTCGTTACTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
3UTR TCA 90 bp ACGAGCGGAAGGAGTTACCTCGAATTACAGGGCTATTTCCACATATaGGCTAGCCAAGGGAGCAGCTTGCGTCTCAGAGGGTTCTGTTGG +
Preference number: 1 (lower is better)
Translates to: TSGRSYLELQGYFHI*ASQGSSLRLRGFCW
Trigger: CCAACAGAACCCTCTGAGACGCAAGCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGCCCTGTAATTCGAGGTAACTCCTTCCGCTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR GCA 90 bp TCAGGTCTGGCTGCAGGAGCCCGCAGCAAGGAGTGTGTGGTGCAATaGAAGGGAATTGTCAGAGCAAGGTTCATTTCACACGGTCTTTTA +
Preference number: 1 (lower is better)
Translates to: SGLAAGARSKECVVQ*KGIVRARFISHGLL
Trigger: TAAAAGACCGTGTGAAATGAACCTTGCTCTGACAATTCCCTTGCATTGCACCACACACTCCTTGCTGCGGGCTCCTGCAGCCAGACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CCA 90 bp TTCCCCGGGCACATGACTTTCAGTGAGCTCTCAACAAGAGGGATGTaGACACGAGCGGAAGGAGTTACCTCGAATTACAGGGCTATTTCC +
Preference number: 1 (lower is better)
Translates to: FPGHMTFSELSTRGM*TRAEGVTSNYRAIS
Trigger: GGAAATAGCCCTGTAATTCGAGGTAACTCCTTCCGCTCGTGTCCACATCCCTCTTGTTGAGAGCTCACTGAAAGTCATGTGCCCGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR GCA 90 bp AAGGACAATATAAATAAACATCTTCAAGAACCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGCACAGCACAGATGGACGCAGGGGCT +
Preference number: 1 (lower is better)
Translates to: KDNINKHLQEPLRDV*TSTVGRTAQMDAGA
Trigger: AGCCCCTGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTATTTATATTGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR TCA 90 bp GCGTCAGAAGCGGTCAGGCTGGGTTTGACAAGATCAGAACCGAAATaGCTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATT +
Preference number: 1 (lower is better)
Translates to: ASEAVRLGLTRSEPK*LRKWEYKEVHLLHI
Trigger: AATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGCTTCTGACGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
3UTR GCA 90 bp CAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTaGATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTT +
Preference number: 1 (lower is better)
Translates to: QDQNRNDYESGNTRR*IYYTLTFSEAPTIF
Trigger: AAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
3UTR GCA 90 bp CTTCGTAAAGCCAAAGAAAACTGCGTACAAGAATTCCTCAGCCACTaGAAATACAACATCGATGGAGTATGCGTACGTCTTCCAGTAAAA +
Preference number: 1 (lower is better)
Translates to: LRKAKENCVQEFLSH*KYNIDGVCVRLPVK
Trigger: TTTTACTGGAAGACGTACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR GCA 90 bp CATTTCACACGGTCTTTTAATCGGCTTCGTAAAGCCAAAGAAAACTaGGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGA +
Preference number: 1 (lower is better)
Translates to: HFTRSFNRLRKAKEN*VQEFLSHCKYNIDG
Trigger: TCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAGCCGATTAAAAGACCGTGTGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR TCA 90 bp AAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 2 (lower is better)
Translates to: KDWPPRKLPAHRSPCSRRRDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...TCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp ATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 2 (lower is better)
Translates to: IVVGKDWPPRKLPAHRSPRDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...CGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp CCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 2 (lower is better)
Translates to: PVSCRRTAARAPGETRGPRDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...AGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp AGCTTCACCCCAGAGGCCAGACCAGGGCGCGGCCTGCGGCCGGGGAGCAACCACACACATGCACCTAGCTaGCTGCCCAGCGGGCCCTCG +
Preference number: 2 (lower is better)
Translates to: SFTPEARPGRGLRPGSNHTHAPS*LPSGPS
Trigger: CGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGT...GTGGTTGCTCCCCGGCCGCAGGCCGCGCCCTGGTCTGGCCTCTGGGGTGAAGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR GCA 90 bp GGGAGGCGCTGCCCTGCACCCAACACACACCGAAAGGCGCCCGCCATGGGGCCAGCTCCCGGGAGGCGCTaGCCTGCACCCAACACACAC +
Preference number: 2 (lower is better)
Translates to: GRRCPAPNTHRKAPAMGPAPGRR*PAPNTH
Trigger: GTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGC...TGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
3UTR-3UTR TCA 90 bp GGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGATCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 2 (lower is better)
Translates to: GRPVSCRRTAARAPGETRSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...TCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp CGCACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 2 (lower is better)
Translates to: RTSLAKRLRGQASWASGCRDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...GCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR CCA 90 bp CCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAG +
Preference number: 2 (lower is better)
Translates to: PQPVLQERLEALSPHLTGRGQAS*ASGCLQ
Trigger: CTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT...GCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR CCA 90 bp AAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAG +
Preference number: 2 (lower is better)
Translates to: KDWPPRKLPAHRSPCSRRRGQAS*ASGCLQ
Trigger: CTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT...TCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR GCA 90 bp CAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCACCGCAGCCCGTaGTCCAGGAGAGACTCGAGG +
Preference number: 2 (lower is better)
Translates to: QPVLQERLEALSPHLTGEAHRSP*SRRDSR
Trigger: CCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGC...TTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR GCA 90 bp ACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTGACTTACGCGCACCGCAGCCCGTaGTCCAGGAGAGACTCGAGG +
Preference number: 2 (lower is better)
Translates to: TELPPQATAAWRPRSVTYAHRSP*SRRDSR
Trigger: CCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGC...GTAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp CAGGCTCCGTCACAGGCCAGCATGCCCAGGGCGGGTCTGCACCTTGGCGCAGCTACTGAAACGCCCAGGTaGCGCCCGGGACAGGGCTCA +
Preference number: 2 (lower is better)
Translates to: QAPSQASMPRAGLHLGAATETPR*RPGQGS
Trigger: TGAGCCCTGTCCCGGGCGGCACCTGGGCGTTTCAGT...AGCTGCGCCAAGGTGCAGACCCGCCCTGGGCATGCTGGCCTGTGACGGAGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587896.6
3UTR-3UTR CCA 90 bp ACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAG +
Preference number: 2 (lower is better)
Translates to: TSLWARTGRPVSCRRTAARGQAS*ASGCLQ
Trigger: CTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT...GGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR CCA 90 bp ACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGGAGCCCGCACCTCACTaGCGAAGCGCCTCAGGGGAC +
Preference number: 2 (lower is better)
Translates to: TGLHIVVGKDWPPRKLPAEPAPH*RSASGD
Trigger: GTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTC...CGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR CCA 90 bp CCTCCTCCTCTAGAGAACCCACGGCCCCGTCCTCGGCCCCCACGGAAGAAGCCCCAGGCCACAGCAGCGTaGCGCCCTCGGAGTGTGACT +
Preference number: 2 (lower is better)
Translates to: PPPLENPRPRPRPPRKKPQATAA*RPRSVT
Trigger: AGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTG...GGGCTTCTTCCGTGGGGGCCGAGGACGGGGCCGTGGGTTCTCTAGAGGAGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
3UTR-3UTR TCA 90 bp CCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGTCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 2 (lower is better)
Translates to: PVLQERLEALSPHLTGEASLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...CGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp ACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCGAGAGGGCACCAAGGTaGACCGAGCTCCCACCGCAG +
Preference number: 2 (lower is better)
Translates to: TSLAKRLRGQASWASGCLERAPR*TELPPQ
Trigger: CTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTCTC...GAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp AAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGATCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 2 (lower is better)
Translates to: KDWPPRKLPAHRSPCSRRSWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...TCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR GCA 90 bp GCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTCCTGGGCTCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 2 (lower is better)
Translates to: ALSPHLTGEAPQGTSLLGSWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...GCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR CCA 90 bp CTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCTTCCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCTC +
Preference number: 2 (lower is better)
Translates to: LQERLEALSPHLTGEAPLPFPES*PGPFNL
Trigger: GAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGG...AAGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585914.5
3UTR-3UTR TCA 90 bp ACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTTCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 2 (lower is better)
Translates to: TRGPEPAPHWRSASGDKPSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...AGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp TGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 2 (lower is better)
Translates to: WARTGRPVSCRRTAARAPSSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...TGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR GCA 90 bp ACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTGACTTACATGCACCTAGCTGACTaGCCAGCGGGCCCTCGCTCT +
Preference number: 2 (lower is better)
Translates to: TELPPQATAAWRPRSVTYMHLAD*PAGPRS
Trigger: AGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCAT...GTAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR GCA 90 bp ACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGGGGCTCAGCGCCACATaGCACTCTTCCCGAAAGCAC +
Preference number: 2 (lower is better)
Translates to: TAARAPGETRGPEPAPHWGLSAT*HSSRKH
Trigger: GTGCTTTCGGGAAGAGTGGCATGTGGCGCTGAGCCC...CCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
3UTR-3UTR CCA 90 bp GCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCAGAGGGTTCTGTTaGGCGCACAACACTTCTGTC +
Preference number: 2 (lower is better)
Translates to: AGAPQPVLQERLEALSPHLRGFC*AHNTSV
Trigger: GACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAG...GTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR CCA 90 bp AGCATGCCCAGGGCGGGTCTGCACCTTGGCGCAGCTGGAGCCAGCTACCCGTATGGCTCCACATCGTTGTaGGCAAGGACTGGCCGCCCC +
Preference number: 2 (lower is better)
Translates to: SMPRAGLHLGAAGASYPYGSTSL*ARTGRP
Trigger: GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCC...ATACGGGTAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCATGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CAA 90 bp CTCAGGCTCCGTCACAGGCCAGCATGCCCAGGGCGGGTCTGCACCTaGGCGCAGCTGGAGCCAGCTACCCGTATGGGATGGAGCTATGTG +
Preference number: 2 (lower is better)
Translates to: LRLRHRPACPGRVCT*AQLEPATRMGWSYV
Trigger: CACATAGCTCCATCCCATACGGGTAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCATGCTGGCCTGTGACGGAGCCTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR TCA 90 bp AGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGGGCTATTTCCACATATaGGCTAGCCAAGGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: RTGRPVSCRRTAARAPGEGYFHI*ASQGSS
Trigger: GCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGCC...CTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp AGCGCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCTCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 2 (lower is better)
Translates to: SASGDKPPGQAAASSSCSSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...GGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR GCA 90 bp ACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGTCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 2 (lower is better)
Translates to: TGLHIVVGKDWPPRKLPASWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...CGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR GCA 90 bp TCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCATCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 2 (lower is better)
Translates to: STSLWARTGRPVSCRRTASWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...TGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR GCA 90 bp GAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGGCGCACCGCAGCCCGTaGTCCAGGAGAGACTCGAGG +
Preference number: 2 (lower is better)
Translates to: ESDFHRAPHRCGQGLAAPAHRSP*SRRDSR
Trigger: CCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGC...CGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR CCA 90 bp TTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGTTGTGGGCAAGGACTaGCCGCCCCGTAAGCTGCCG +
Preference number: 2 (lower is better)
Translates to: FTGLHIVVGKDWPPRKLPVVGKD*PPRKLP
Trigger: CGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAAC...CGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp CCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 2 (lower is better)
Translates to: PVLQERLEALSPHLTGEASSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...CGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp ACCGGCTGGCCGTCTGAGGTCGCCCTGGGATGCCACGTGCCTCTGCTCTCTGGCAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 2 (lower is better)
Translates to: TGWPSEVALGCHVPLLSGSSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...GCCAGAGAGCAGAGGCACGTGGCATCCCAGGGCGACCTCAGACGGCCAGCCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR TCA 90 bp ACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 2 (lower is better)
Translates to: TAARAPGETRGPEPAPHWSSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...CCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp ATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 2 (lower is better)
Translates to: IRLSQGSTSLWARTGRPVRDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...TACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp GGCACCAAGGTGAACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGCACAGTGACAAGGTCTaGGTGTCCAGCCTAAAGTGC +
Preference number: 2 (lower is better)
Translates to: GTKVNRAPTAGHSSVAPSHSDKV*VSSLKC
Trigger: GCACTTTAGGCTGGACACTCAGACCTTGTCACTGTG...CGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTTGGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR GCA 90 bp AGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTCATGGGGCCAACCCGGGCTCCAGGGCAGTTaGTGCCACACCCGCCGGGGT +
Preference number: 2 (lower is better)
Translates to: SPFDLREVSGAPTSWGQPGLQGS*CHTRRG
Trigger: ACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCC...GGGTTGGCCCCATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp CCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTCCCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCTC +
Preference number: 2 (lower is better)
Translates to: PPALVPGEVPPGTVTPEVPFPES*PGPFNL
Trigger: GAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGG...GACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000592234.5
3UTR-3UTR CCA 90 bp CCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGACGCAGTTGTGGGCAAGGACTaGCCGCCCCGTAAGCTGCCG +
Preference number: 2 (lower is better)
Translates to: PLRDVCTSTVGRTAQMDAVVGKD*PPRKLP
Trigger: CGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAAC...TGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR TCA 90 bp ACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 2 (lower is better)
Translates to: TGLHIVVGKDWPPRKLPASSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...CGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp CTGCGGCCACACATGCACCTAGCTGACTGCCCAGCGGGCCCTCGCTCTCCCTTGAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 2 (lower is better)
Translates to: LRPHMHLADCPAGPRSPLSSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...CAAGGGAGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGTGGCCGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR TCA 90 bp GAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGACAGGCGCCCTCGGAGTGTaGCTTACCGTAACTGTCATA +
Preference number: 2 (lower is better)
Translates to: ERLEALSPHLTGEAPQGTGALGV*LTVTVI
Trigger: TATGACAGTTACGGTAAGTCACACTCCGAGGGCGCC...TGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp ATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACGGGCTCCAGGGCAGTTaGTGCCACACCCGCCGGGGT +
Preference number: 2 (lower is better)
Translates to: IFKNLSGTSARLLWGAQHGLQGS*CHTRRG
Trigger: ACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCC...GTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp CACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGAGTTGGAAAGGGCTCCAGGGCAGTTaGTGCCACACCCGCCGGGGT +
Preference number: 2 (lower is better)
Translates to: HPPGSYHTTLRNVTRSWKGLQGS*CHTRRG
Trigger: ACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCC...TTTCCAACTCCGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp ACATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCGGGCTCCAGGGCAGTTaGTGCCACACCCGCCGGGGT +
Preference number: 2 (lower is better)
Translates to: TSSRTSQGRLHVYCGAHSGLQGS*CHTRRG
Trigger: ACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCC...GCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp CCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACCCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGC +
Preference number: 2 (lower is better)
Translates to: PGQLLPHPPGSYHTTLRNPLRDV*TSTVGR
Trigger: GCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG...GTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp CTGCGGCCACACATGCACCTAGCTGACTGCCCAGCGGGCCCTCGCTCTCCCTTGGTGTCCAGCCTAAAGTaGTTGGAGAGGGCACCAAGG +
Preference number: 2 (lower is better)
Translates to: LRPHMHLADCPAGPRSPLVSSLK*LERAPR
Trigger: CCTTGGTGCCCTCTCCAAGCACTTTAGGCTGGACAC...CAAGGGAGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGTGGCCGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR GCA 90 bp GTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGACTCGGCTTTCTGGGTaGACACGTGGCCCTTTATTC +
Preference number: 2 (lower is better)
Translates to: VSCRRTAARAPGETRGPETRLSG*TRGPLF
Trigger: GAATAAAGGGCCACGTGTGCACCCAGAAAGCCGAGT...CTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586636.5
ENST00000591376.5
3UTR-3UTR CCA 90 bp AGCATGCCCAGGGCGGGTCTGCACCTTGGCGCAGCTGGAGCCAGCTACCCGTATTCTGCACGTCTACTGTaGGGCGCACAGCACAGATGG +
Preference number: 2 (lower is better)
Translates to: SMPRAGLHLGAAGASYPYSARLL*GAQHRW
Trigger: CCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGA...ATACGGGTAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCATGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR CCA 90 bp GCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAG +
Preference number: 2 (lower is better)
Translates to: AVAATPAGVLPHYTQKRHRGQAS*ASGCLQ
Trigger: CTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT...GTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR CCA 90 bp GCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACGAAAGGCGCCCGCCATaGGGCCATAGGTGCGGGAGA +
Preference number: 2 (lower is better)
Translates to: AVAATPAGVLPHYTQKRHERRPP*GHRCGR
Trigger: TCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTC...GTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587896.6
3UTR-3UTR CCA 90 bp GCTCTCTGGCCTGCTTCTAGACTGAGGCAGTCCAGGTCAGCGTCAGGTGCACGTGAGCCCGCACCTCACTaGCGAAGCGCCTCCTGGAAG +
Preference number: 2 (lower is better)
Translates to: ALWPASRLRQSRSASGAREPAPH*RSASWK
Trigger: CTTCCAGGAGGCGCTTCGCCAGTGAGGTGCGGGCTC...ACGTGCACCTGACGCTGACCTGGACTGCCTCAGTCTAGAAGCAGGCCAGAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587896.6
3UTR-3UTR CCA 90 bp ATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAGAGCCCGCACCTCACTaGCGAAGCGCAGGGGACAAG +
Preference number: 2 (lower is better)
Translates to: IRLSQGSTSLWARTGRPVEPAPH*RSAGDK
Trigger: CTTGTCCCCTGCGCTTCGCCAGTGAGGTGCGGGCTC...TACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585913.5
3UTR CAA 90 bp ACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTaGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCA +
Preference number: 2 (lower is better)
Translates to: TWPFIRIRLSQGSTS*WARTGRPVSCRRTA
Trigger: TGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp ACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGGGCTATTTCCACATATaGGCTAGCCAAGGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: TGLHIVVGKDWPPRKLPAGYFHI*ASQGSS
Trigger: GCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGCC...CGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp GCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGGCTATTTCCACATATaGGCTAGCCAAGGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: APGETRGPEPAPHWRSASGYFHI*ASQGSS
Trigger: GCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGCC...TGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000444172.6
ENST00000587169.5
ENST00000590347.5
ENST00000592234.5
3UTR-3UTR GCA 90 bp GAGGGCACCAAGGTGAACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTTGGCTTTTGCGTCCTaGGATAGAAATGGCTCTGAG +
Preference number: 2 (lower is better)
Translates to: EGTKVNRAPTAGHSSVAPLAFAS*DRNGSE
Trigger: CTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAA...GGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR GCA 90 bp GCTTGCGTCTCAGAGGGTTCTGTTGGGCGCACAACACTTCTGTCCTCCGAGGGCATGCACCTAGCTGACTaGCCAGCGGGCCCTCGCTCT +
Preference number: 2 (lower is better)
Translates to: ACVSEGSVGRTTLLSSEGMHLAD*PAGPRS
Trigger: AGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCAT...GCCCTCGGAGGACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGACGCAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp CAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCGGGCTCAGCGCCACATaGCACTCTTCCCGAAAGCAC +
Preference number: 2 (lower is better)
Translates to: QASWASGCLQLLFQVKSLGLSAT*HSSRKH
Trigger: GTGCTTTCGGGAAGAGTGGCATGTGGCGCTGAGCCC...GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
3UTR-3UTR CCA 90 bp TCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCACTCAGAGGGTTCTGTTaGGCGCACAACACTTCTGTC +
Preference number: 2 (lower is better)
Translates to: STSLWARTGRPVSCRRTALRGFC*AHNTSV
Trigger: GACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAG...TGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR CCA 90 bp GCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGATTGGTCAGTCTCATTTaGCTTTTGCGTCCTGCGATA +
Preference number: 2 (lower is better)
Translates to: ARTGRPVSCRRTAARAPGLVSLI*LLRPAI
Trigger: TATCGCAGGACGCAAAAGCCAAATGAGACTGACCAA...TCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp CAAGGTCTGAGTGTCCAGCCTAAAGTGCTTGGAGAGGGCACCAAGGTGAACCGAGCTCCCCCAGGGACCTaGGACCCGGGACGGAAGCTG +
Preference number: 2 (lower is better)
Translates to: QGLSVQPKVLGEGTKVNRAPPGT*DPGRKL
Trigger: CAGCTTCCGTCCCGGGTCCCAGGTCCCTGGGGGAGC...TCGGTTCACCTTGGTGCCCTCTCCAAGCACTTTAGGCTGGACACTCAGACCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR CAA 90 bp CCGGCAGAGCCACCACGGTACCCACGGGATCGGTTGTCTGACGACTaGCCTGCCTGGTCTACTCGGATCTGCCGTCCATCTACAGACTTC +
Preference number: 2 (lower is better)
Translates to: PAEPPRYPRDRLSDD*PAWSTRICRPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTACCGTGGTGGCTCTGCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
3UTR-3UTR TCA 90 bp CAGCTTCACCCCAGAGGCCAGACCAGGGCGCGGCCTGCGGCCGGGGAGCAACCAAGATCAGAACCGAAATaGCTACGAAAGTGGGAATAC +
Preference number: 2 (lower is better)
Translates to: QLHPRGQTRARPAAGEQPRSEPK*LRKWEY
Trigger: GTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCT...TGGTTGCTCCCCGGCCGCAGGCCGCGCCCTGGTCTGGCCTCTGGGGTGAAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR TCA 90 bp GCTCAGCGCCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTTCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 2 (lower is better)
Translates to: AQRHMPLFPKALTGDKPPSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...AGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGCGCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
3UTR-3UTR GCA 90 bp AGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACCCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGC +
Preference number: 2 (lower is better)
Translates to: SCCHTRRGPTTLHSETSHPLRDV*TSTVGR
Trigger: GCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG...GTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp GGACAGATGCGCCTCTTCTGGGCAAGCACAGTGACAAGGTCTGAGTGTCCAGCCATGCACCTAGCTGACTaGCCAGCGGGCCCTCGCTCT +
Preference number: 2 (lower is better)
Translates to: GQMRLFWASTVTRSECPAMHLAD*PAGPRS
Trigger: AGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCAT...GGCTGGACACTCAGACCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR CCA 90 bp ACATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCGGCTCCACATCGTTGTaGGCAAGGACTGGCCGCCCC +
Preference number: 2 (lower is better)
Translates to: TSSRTSQGRLHVYCGAHSGSTSL*ARTGRP
Trigger: GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCC...GCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR CCA 90 bp AGCAGGCACAGTGTAAAGGCACCGAAGCAACAAGAGGCAGCTTCACCCCAGAGGCAGGCCACAGCAGCGTaGCGCCCTCGGAGTGTGACT +
Preference number: 2 (lower is better)
Translates to: SRHSVKAPKQQEAASPQRQATAA*RPRSVT
Trigger: AGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTG...CCTCTGGGGTGAAGCTGCCTCTTGTTGCTTCGGTGCCTTTACACTGTGCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR TCA 90 bp GCTCTCAGGCCACCCTTCCCCGAGTCCTGGCCGGGCCCCTTCAACCTCGAATTAGGCTATTTCCACATATaGGCTAGCCAAGGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: ALRPPFPESWPGPFNLELGYFHI*ASQGSS
Trigger: GCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGCC...TAATTCGAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGGTGGCCTGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp GTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 2 (lower is better)
Translates to: VHTWPFIRIRLSQGSTSLRDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...CAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp GAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTCAACACATGCACCTAGCTaGCTGCCCAGCGGGCCCTCG +
Preference number: 2 (lower is better)
Translates to: ERIHSPFDLREVSGAPTSTHAPS*LPSGPS
Trigger: CGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGT...TGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp ATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACCCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGC +
Preference number: 2 (lower is better)
Translates to: IFKNLSGTSARLLWGAQHPLRDV*TSTVGR
Trigger: GCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG...GTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp AGCTTCACCCCAGAGGCCAGACCAGGGCGCGGCCTGCGGCCGGGGAGCAACCACAACATCGATGGAGTATaGGTACGTCTTCCAGTAAAA +
Preference number: 2 (lower is better)
Translates to: SFTPEARPGRGLRPGSNHNIDGV*VRLPVK
Trigger: TTTTACTGGAAGACGTACGCATACTCCATCGATGTT...GTGGTTGCTCCCCGGCCGCAGGCCGCGCCCTGGTCTGGCCTCTGGGGTGAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp GCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGCGCACCGCAGCCCGTaGTCCAGGAGAGACTCGAGG +
Preference number: 2 (lower is better)
Translates to: AHVALYSNPTFTGLHIVVAHRSP*SRRDSR
Trigger: CCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGC...CACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR GCA 90 bp GCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGCTCCCGGGAGGCGCTaGCCTGCACCCAACACACAC +
Preference number: 2 (lower is better)
Translates to: AHVALYSNPTFTGLHIVVAPGRR*PAPNTH
Trigger: GTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGC...CACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
3UTR-3UTR CCA 90 bp GTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGCCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCTC +
Preference number: 2 (lower is better)
Translates to: VHTWPFIRIRLSQGSTSLPFPES*PGPFNL
Trigger: GAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGG...CAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444172.6
ENST00000592234.5
3UTR-3UTR CCA 90 bp CACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAG +
Preference number: 2 (lower is better)
Translates to: HVALYSNPTFTGLHIVVGRGQAS*ASGCLQ
Trigger: CTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT...GCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR CCA 90 bp TATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCAGGCCACAGCAGCGTaGCGCCCTCGGAGTGTGACT +
Preference number: 2 (lower is better)
Translates to: YSNPTFTGLHIVVGKDWPQATAA*RPRSVT
Trigger: AGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTG...CGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp ACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAGCAGGACTCACTGGCAGCAAGGAGTGTGTaGTGCAATGCAAGGGAATTG +
Preference number: 2 (lower is better)
Translates to: TPKGARHGAIGAGEQDSLAARSV*CNAREL
Trigger: CAATTCCCTTGCATTGCACCACACACTCCTTGCTGC...CAGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587896.6
3UTR-3UTR CCA 90 bp GAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGACAGACTCGGCTTTCTaGGTGCACACGTGGCCCTTT +
Preference number: 2 (lower is better)
Translates to: ESDFHRAPHRCGQGLAAPTDSAF*VHTWPF
Trigger: AAAGGGCCACGTGTGCACCCAGAAAGCCGAGTCTGT...CGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586636.5
ENST00000591376.5
3UTR-3UTR TCA 90 bp GCTTGCGTCTCAGAGGGTTCTGTTGGGCGCACAACACTTCTGTCCTCCGAGGGCAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 2 (lower is better)
Translates to: ACVSEGSVGRTTLLSSEGSSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...GCCCTCGGAGGACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGACGCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR TCA 90 bp GTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGAGAGCAGGACTCACTaGAACGCCCAGGTGCCGCCC +
Preference number: 2 (lower is better)
Translates to: VALYSNPTFTGLHIVVGKESRTH*NAQVPP
Trigger: GGGCGGCACCTGGGCGTTTCAGTGAGTCCTGCTCTC...CTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
3UTR-3UTR GCA 90 bp GAGGGCACCAAGGTGAACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCAACATCGATGGAGTATaGGTACGTCTTCCAGTAAAA +
Preference number: 2 (lower is better)
Translates to: EGTKVNRAPTAGHSSVAPNIDGV*VRLPVK
Trigger: TTTTACTGGAAGACGTACGCATACTCCATCGATGTT...GGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp CTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTGTCCAGCCTAAAGTaGTTGGAGAGGGCACCAAGG +
Preference number: 2 (lower is better)
Translates to: LPPALVPGEVPPGTVTPEVSSLK*LERAPR
Trigger: CCTTGGTGCCCTCTCCAAGCACTTTAGGCTGGACAC...CTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp CTGGGTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCCTGCTCAGGTCTGGCTaGAGGAGCCCGCAGCAAGGA +
Preference number: 2 (lower is better)
Translates to: LGAHVALYSNPTFTGLHILLRSG*RSPQQG
Trigger: TCCTTGCTGCGGGCTCCTGCAGCCAGACCTGAGCAG...GATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCACCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR GCA 90 bp AACCTGCCAAAGCAAAGCAGCGTTACTCCCAACGTCCTCCACAGGGCTCACAGCCCATGGGGCCATAGGTaGGGGAGAGCAGGACTCACT +
Preference number: 2 (lower is better)
Translates to: NLPKQSSVTPNVLHRAHSPWGHR*GRAGLT
Trigger: AGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGG...GCTGTGAGCCCTGTGGAGGACGTTGGGAGTAACGCTGCTTTGCTTTGGCAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587896.6
3UTR-3UTR GCA 90 bp TGGGTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGCGGGAGGCGCTGCCCTaGACCCAACACACACCGAAA +
Preference number: 2 (lower is better)
Translates to: WVHTWPFIRIRLSQGSTSREALP*TQHTPK
Trigger: TTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCG...CGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
3UTR-3UTR CCA 90 bp TCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACTCAGAGGGTTCTGTTaGGCGCACAACACTTCTGTC +
Preference number: 2 (lower is better)
Translates to: SWASGCLQLLFQVKSLLGLRGFC*AHNTSV
Trigger: GACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAG...TCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR CCA 90 bp CCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGAGCCCGCACCTCACTaGCGAAGCGCCTCAGGGGAC +
Preference number: 2 (lower is better)
Translates to: PLFESDFHRAPHRCGQGLEPAPH*RSASGD
Trigger: GTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTC...CAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR CCA 90 bp TGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTCTTCACAGCCGAGGGAGGCTaGCCTGCGGCCACACATGCA +
Preference number: 2 (lower is better)
Translates to: WLLRPAIEMALRGQMRLFTAEGG*PAATHA
Trigger: TGCATGTGTGGCCGCAGGCCAGCCTCCCTCGGCTGT...GAAGAGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR TCA 90 bp TGCTCAGCTTCCGACAAAGAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGGAGAGGGCACCAAGGTaGACCGAGCTCCCACCGCAG +
Preference number: 2 (lower is better)
Translates to: CSASDKERIHSPFDLREVERAPR*TELPPQ
Trigger: CTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTCTC...CACTTCTCTGAGATCGAACGGACTGTGAATCCGCTCTTTGTCGGAAGCTGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR TCA 90 bp GCTCTCTGGCCTGCTTCTAGACTGAGGCAGTCCAGGTCAGCGTCAGGTGCACGTCTCGTTGTGTGTAGCTaGGGACAAGAAGCAGGCACA +
Preference number: 2 (lower is better)
Translates to: ALWPASRLRQSRSASGARLVVCS*GQEAGT
Trigger: TGTGCCTGCTTCTTGTCCTCAGCTACACACAACGAG...ACGTGCACCTGACGCTGACCTGGACTGCCTCAGTCTAGAAGCAGGCCAGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp GGGGCTCCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCCAAATACAACATCGATaGAGTATGCGTACGTCTTCC +
Preference number: 2 (lower is better)
Translates to: GAPGQLLPHPPGSYHTTLQIQHR*SMRTSS
Trigger: GGAAGACGTACGCATACTCCATCGATGTTGTATTTG...GAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp GGACAGATGCGCCTCTTCTGGGCAAGCACAGTGACAAGGTCTGAGTGTCCAGCCCAGATGCGCCTCTTCTaGGCAAGCACAGTGACAAGG +
Preference number: 2 (lower is better)
Translates to: GQMRLFWASTVTRSECPAQMRLF*ASTVTR
Trigger: CCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTG...GGCTGGACACTCAGACCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR CCA 90 bp CCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGAAAGGCGCCCGCCATaGGGCCATAGGTGCGGGAGA +
Preference number: 2 (lower is better)
Translates to: PFIRIRLSQGSTSLWARTERRPP*GHRCGR
Trigger: TCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTC...AGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
3UTR-3UTR TCA 90 bp GACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGACGCAGGGGCTGGGAGATCAGAACCGAAATaGCTACGAAAGTGGGAATAC +
Preference number: 2 (lower is better)
Translates to: DVCTSTVGRTAQMDAGAGRSEPK*LRKWEY
Trigger: GTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCT...CCCAGCCCCTGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR TCA 90 bp CTGCACCCAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAAGATCAGAACCGAAATaGCTACGAAAGTGGGAATAC +
Preference number: 2 (lower is better)
Translates to: LHPTHTERRPPWGHRCGRRSEPK*LRKWEY
Trigger: GTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCT...TCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587896.6
3UTR-3UTR TCA 90 bp CCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGAGTTGGCGGTCAGGCTGGGTTTaGCAAGATCAGAACCGAAAT +
Preference number: 2 (lower is better)
Translates to: PHPPGSYHTTLRNVTRSWRSGWV*QDQNRN
Trigger: ATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCG...CCAACTCCGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR TCA 90 bp AGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCGGTCAGGCTGGGTTTaGCAAGATCAGAACCGAAAT +
Preference number: 2 (lower is better)
Translates to: RAVAATPAGVLPHYTQKRRSGWV*QDQNRN
Trigger: ATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCG...ACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR TCA 90 bp GCTTGCGTCTCAGAGGGTTCTGTTGGGCGCACAACACTTCTGTCCTCCGAGGGCCGGTCAGGCTGGGTTTaGCAAGATCAGAACCGAAAT +
Preference number: 2 (lower is better)
Translates to: ACVSEGSVGRTTLLSSEGRSGWV*QDQNRN
Trigger: ATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCG...GCCCTCGGAGGACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGACGCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR TCA 90 bp CAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGTCGATCTCAGAGAAGTaGGTGGGGCACCCACTTCAT +
Preference number: 2 (lower is better)
Translates to: QEPLRDVCTSTVGRTAQMSISEK*VGHPLH
Trigger: ATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGA...CATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR TCA 90 bp GCGGGGGCGTTCACTGGTCTTCAATCCTGCTTAAGGGATTTCATCTATGAGCCATCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 2 (lower is better)
Translates to: AGAFTGLQSCLRDFIYEPSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...TGGCTCATAGATGAAATCCCTTAAGCAGGATTGAAGACCAGTGAACGCCCCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR TCA 90 bp TACTCGTTGTGTGTAGCTGAGGACAAGAAGCAGGCACAGTGTAAAGGCACCGAAACACATGCACCTAGCTaGCTGCCCAGCGGGCCCTCG +
Preference number: 2 (lower is better)
Translates to: YSLCVAEDKKQAQCKGTETHAPS*LPSGPS
Trigger: CGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGT...TTCGGTGCCTTTACACTGTGCCTGCTTCTTGTCCTCAGCTACACACAACGAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR GCA 90 bp GTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 2 (lower is better)
Translates to: VHTWPFIRIRLSQGSTSLSWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...CAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR GCA 90 bp GGTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTTCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 2 (lower is better)
Translates to: GAHVALYSNPTFTGLHIVSWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...AACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR GCA 90 bp AGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTCATGGGGCCAACCCGCCCTCGCTCTCCCTTaGCTTTTTGGTCAGTCTCAT +
Preference number: 2 (lower is better)
Translates to: SPFDLREVSGAPTSWGQPALALP*LFGQSH
Trigger: ATGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGC...GGGTTGGCCCCATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp CAGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCCTGGGTCCCCACCTaGCTCTGCTCCTTGCCCAGC +
Preference number: 2 (lower is better)
Translates to: QSHLAFASCDRNGSERTDAWVPT*LCSLPS
Trigger: GCTGGGCAAGGAGCAGAGGCAGGTGGGGACCCAGGC...ATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR CAA 90 bp GCCCAGCGGGCCCTCGCTCTCCCTTGCCTTTTTGGTCAGTCTCATTaGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGAT +
Preference number: 2 (lower is better)
Translates to: AQRALALPCLFGQSH*AFASCDRNGSERTD
Trigger: ATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGCCCGCTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR TCA 90 bp CAGGCACAGTGTAAAGGCACCGAAGCAACAAGAGGCAGCTTCACCCCAGAGGCCCGGTCAGGCTGGGTTTaGCAAGATCAGAACCGAAAT +
Preference number: 2 (lower is better)
Translates to: QAQCKGTEATRGSFTPEARSGWV*QDQNRN
Trigger: ATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCG...GGCCTCTGGGGTGAAGCTGCCTCTTGTTGCTTCGGTGCCTTTACACTGTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR TCA 90 bp CAAGGTCTGAGTGTCCAGCCTAAAGTGCTTGGAGAGGGCACCAAGGTGAACCGAGGCGCCCTCGGAGTGTaGCTTACCGTAACTGTCATA +
Preference number: 2 (lower is better)
Translates to: QGLSVQPKVLGEGTKVNRGALGV*LTVTVI
Trigger: TATGACAGTTACGGTAAGTCACACTCCGAGGGCGCC...TCGGTTCACCTTGGTGCCCTCTCCAAGCACTTTAGGCTGGACACTCAGACCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR TCA 90 bp AGCAGGCACAGTGTAAAGGCACCGAAGCAACAAGAGGCAGCTTCACCCCAGAGGCACAGTGACAAGGTCTaGGTGTCCAGCCTAAAGTGC +
Preference number: 2 (lower is better)
Translates to: SRHSVKAPKQQEAASPQRHSDKV*VSSLKC
Trigger: GCACTTTAGGCTGGACACTCAGACCTTGTCACTGTG...CCTCTGGGGTGAAGCTGCCTCTTGTTGCTTCGGTGCCTTTACACTGTGCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR TCA 90 bp GCACAGTGTAAAGGCACCGAAGCAACAAGAGGCAGCTTCACCCCAGAGGCCAGACACAGTGACAAGGTCTaGGTGTCCAGCCTAAAGTGC +
Preference number: 2 (lower is better)
Translates to: AQCKGTEATRGSFTPEARHSDKV*VSSLKC
Trigger: GCACTTTAGGCTGGACACTCAGACCTTGTCACTGTG...TCTGGCCTCTGGGGTGAAGCTGCCTCTTGTTGCTTCGGTGCCTTTACACTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR TCA 90 bp AGGACGATCTTGAGCAGGAAGGGTTTTTACTCGTTGTGTGTAGCTGAGGACAAGACACATGCACCTAGCTaGCTGCCCAGCGGGCCCTCG +
Preference number: 2 (lower is better)
Translates to: RTILSRKGFYSLCVAEDKTHAPS*LPSGPS
Trigger: CGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGT...CTTGTCCTCAGCTACACACAACGAGTAAAAACCCTTCCTGCTCAAGATCGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR TCA 90 bp AACCTGCCAAAGCAAAGCAGCGTTACTCCCAACGTCCTCCACAGGGCTCACAGCCTCGTTGTGTGTAGCTaGGGACAAGAAGCAGGCACA +
Preference number: 2 (lower is better)
Translates to: NLPKQSSVTPNVLHRAHSLVVCS*GQEAGT
Trigger: TGTGCCTGCTTCTTGTCCTCAGCTACACACAACGAG...GCTGTGAGCCCTGTGGAGGACGTTGGGAGTAACGCTGCTTTGCTTTGGCAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp TTCCTCAGCCACTGCAAATACAACATCGATGGAGTATGCGTACGTCTTCCAGTACTCCAGGGCAGTTGCTaGCACACCCGCCGGGGTCCT +
Preference number: 2 (lower is better)
Translates to: FLSHCKYNIDGVCVRLPVLQGSC*HTRRGP
Trigger: AGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAG...TACTGGAAGACGTACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp TGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACCTCCAGGGCAGTTGCTaGCACACCCGCCGGGGTCCT +
Preference number: 2 (lower is better)
Translates to: WEYKEVHLLHINVQRSSHLQGSC*HTRRGP
Trigger: AGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAG...GTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp TCAGCTTCCGACAAAGAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTCCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGC +
Preference number: 2 (lower is better)
Translates to: SASDKERIHSPFDLREVSPLRDV*TSTVGR
Trigger: GCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG...ACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTCTTTGTCGGAAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp CATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTTCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 2 (lower is better)
Translates to: HLAFASCDRNGSERTDAPSWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...AGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp AACCTGCCAAAGCAAAGCAGCGTTACTCCCAACGTCCTCCACAGGGCTCACAGCCTCAGAGGGTTCTGTTaGGCGCACAACACTTCTGTC +
Preference number: 2 (lower is better)
Translates to: NLPKQSSVTPNVLHRAHSLRGFC*AHNTSV
Trigger: GACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAG...GCTGTGAGCCCTGTGGAGGACGTTGGGAGTAACGCTGCTTTGCTTTGGCAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR CCA 90 bp CACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCCAGATGCGCCTCTTCTaGGCAAGCACAGTGACAAGG +
Preference number: 2 (lower is better)
Translates to: HVALYSNPTFTGLHIVVGQMRLF*ASTVTR
Trigger: CCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTG...GCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp TTGAGCAGGAAGGGTTTTTACTCGTTGTGTGTAGCTGAGGACAAGAAGCAGGCAACAGCCGAGGGAGGCTaGCCTGCGGCCACACATGCA +
Preference number: 2 (lower is better)
Translates to: LSRKGFYSLCVAEDKKQATAEGG*PAATHA
Trigger: TGCATGTGTGGCCGCAGGCCAGCCTCCCTCGGCTGT...TGCCTGCTTCTTGTCCTCAGCTACACACAACGAGTAAAAACCCTTCCTGCTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR CCA 90 bp CAGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 2 (lower is better)
Translates to: QSHLAFASCDRNGSERTDRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...ATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591097.5
3UTR-3UTR CCA 90 bp TCCCTTGCCTTTTTGGTCAGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGACCCGGGACGGAAGCTaGCCATCCCGCAACCACCCC +
Preference number: 2 (lower is better)
Translates to: SLAFLVSLIWLLRPAIEMTRDGS*PSRNHP
Trigger: GGGGTGGTTGCGGGATGGCCAGCTTCCGTCCCGGGT...CATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAAAAGGCAAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR-3UTR TCA 90 bp GAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTCATCGATCTCAGAGAAGTaGGTGGGGCACCCACTTCAT +
Preference number: 2 (lower is better)
Translates to: ERIHSPFDLREVSGAPTSSISEK*VGHPLH
Trigger: ATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGA...TGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp AGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTCATGGGGCCAACCCTTGGCTTTTGCGTCCTaGGATAGAAATGGCTCTGAG +
Preference number: 2 (lower is better)
Translates to: SPFDLREVSGAPTSWGQPLAFAS*DRNGSE
Trigger: CTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAA...GGGTTGGCCCCATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp CCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGACGCATCTCCCTTGCCTTTTTaGTCAGTCTCATTTGGCTTT +
Preference number: 2 (lower is better)
Translates to: PLRDVCTSTVGRTAQMDASPLPF*SVSFGF
Trigger: AAAGCCAAATGAGACTGACCAAAAAGGCAAGGGAGA...TGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp CCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACTCTCCCTTGCCTTTTTaGTCAGTCTCATTTGGCTTT +
Preference number: 2 (lower is better)
Translates to: PGQLLPHPPGSYHTTLRNSPLPF*SVSFGF
Trigger: AAAGCCAAATGAGACTGACCAAAAAGGCAAGGGAGA...GTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp AGGCCCTCCCGCTTCTGCGAATGTCCTGAGCAGTCTCCTCTCCTCTTGGCCTGGTCTCCCTTGCCTTTTTaGTCAGTCTCATTTGGCTTT +
Preference number: 2 (lower is better)
Translates to: RPSRFCECPEQSPLLLAWSPLPF*SVSFGF
Trigger: AAAGCCAAATGAGACTGACCAAAAAGGCAAGGGAGA...CCAGGCCAAGAGGAGAGGAGACTGCTCAGGACATTCGCAGAAGCGGGAGGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR-3UTR TCA 90 bp GTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGGGCTATTTCCACATATaGGCTAGCCAAGGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: VHTWPFIRIRLSQGSTSLGYFHI*ASQGSS
Trigger: GCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGCC...CAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000444172.6
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp TTCTGGGTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACAGGCTATTTCCACATATaGGCTAGCCAAGGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: FWVHTWPFIRIRLSQGSTGYFHI*ASQGSS
Trigger: GCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGCC...TGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCACCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp CCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 2 (lower is better)
Translates to: PLFESDFHRAPHRCGQGLSSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...CAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp TTTTTGGTCAGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGAGAGGGCACCAAGGTaGACCGAGCTCCCACCGCAG +
Preference number: 2 (lower is better)
Translates to: FLVSLIWLLRPAIEMALRERAPR*TELPPQ
Trigger: CTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTCTC...TCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR TCA 90 bp TTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTCTTTCTGGGCAAGCACAGTaGCAAGGTCTGAGTGTCCAG +
Preference number: 2 (lower is better)
Translates to: LAFASCDRNGSERTDAPLSGQAQ*QGLSVQ
Trigger: CTGGACACTCAGACCTTGTCACTGTGCTTGCCCAGA...AAGAGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR GCA 90 bp CTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGTATGCGTCCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGC +
Preference number: 2 (lower is better)
Translates to: LRTRIPQPLQIQHRWSMRPLRDV*TSTVGR
Trigger: GCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG...ACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp CCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTCTTCTGGGCAAGCACATGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 2 (lower is better)
Translates to: PAIEMALRGQMRLFWASTWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...TGTGCTTGCCCAGAAGAGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
3UTR-3UTR CCA 90 bp CACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGCTCAGAGGGTTCTGTTaGGCGCACAACACTTCTGTC +
Preference number: 2 (lower is better)
Translates to: HTWPFIRIRLSQGSTSLWLRGFC*AHNTSV
Trigger: GACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAG...CCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000444172.6
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR CCA 90 bp CAACAAGGACCCCAGCAGGGCAGCATCTTGGAAATTGTTCAAAATCTCCACCAGGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 2 (lower is better)
Translates to: QQGPQQGSILEIVQNLHQDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...CTGGTGGAGATTTTGAACAATTTCCAAGATGCTGCCCTGCTGGGGTCCTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR-3UTR GCA 90 bp AGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTGGGAATACAAGGAGGTaGATTTACTACACATTAACG +
Preference number: 2 (lower is better)
Translates to: RAVAATPAGVLPHYTQKRGNTRR*IYYTLT
Trigger: CGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC...ACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp TCTTTTAATCGGCTTCGTAAAGCCAAAGAAAACTGCGTACAAGAATTCCTCAGCCTCCAGGGCAGTTGCTaGCACACCCGCCGGGGTCCT +
Preference number: 2 (lower is better)
Translates to: SFNRLRKAKENCVQEFLSLQGSC*HTRRGP
Trigger: AGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAG...GCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAGCCGATTAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp CATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTGCCCTCGCTCTCCCTTaGCTTTTTGGTCAGTCTCAT +
Preference number: 2 (lower is better)
Translates to: HLAFASCDRNGSERTDAPALALP*LFGQSH
Trigger: ATGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGC...AGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR GCA 90 bp GAGCCCGCAGCAAGGAGTGTGTGGTGCAATGCAAGGGAATTGTCAGAGCAAGGTGAGTGTGTGGTGCAATaGAAGGGAATTGTCAGAGCA +
Preference number: 2 (lower is better)
Translates to: EPAARSVWCNARELSEQGECVVQ*KGIVRA
Trigger: TGCTCTGACAATTCCCTTGCATTGCACCACACACTC...ACCTTGCTCTGACAATTCCCTTGCATTGCACCACACACTCCTTGCTGCGGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR CCA 90 bp GGACAGATGCGCCTCTTCTGGGCAAGCACAGTGACAAGGTCTGAGTGTCCAGCCTCTCCCTTGCCTTTTTaGTCAGTCTCATTTGGCTTT +
Preference number: 2 (lower is better)
Translates to: GQMRLFWASTVTRSECPASPLPF*SVSFGF
Trigger: AAAGCCAAATGAGACTGACCAAAAAGGCAAGGGAGA...GGCTGGACACTCAGACCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR TCA 90 bp TCAGCTTCCGACAAAGAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTTCGATCTCAGAGAAGTaGGTGGGGCACCCACTTCAT +
Preference number: 2 (lower is better)
Translates to: SASDKERIHSPFDLREVSSISEK*VGHPLH
Trigger: ATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGA...ACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTCTTTGTCGGAAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR TCA 90 bp CGTAAAGCCAAAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACTCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 2 (lower is better)
Translates to: RKAKENCVQEFLSHCKYNSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...GTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR TCA 90 bp ACACACAGCCATTGGAAGGACGATCTTGAGCAGGAAGGGTTTTTACTCGTTGTGGGCGCCCTCGGAGTGTaGCTTACCGTAACTGTCATA +
Preference number: 2 (lower is better)
Translates to: THSHWKDDLEQEGFLLVVGALGV*LTVTVI
Trigger: TATGACAGTTACGGTAAGTCACACTCCGAGGGCGCC...CACAACGAGTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAATGGCTGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR GCA 90 bp TACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTCCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGC +
Preference number: 2 (lower is better)
Translates to: YKEVHLLHINVQRSSHNLPLRDV*TSTVGR
Trigger: GCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG...AAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp CAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGAACATCGATGGAGTATaGGTACGTCTTCCAGTAAAA +
Preference number: 2 (lower is better)
Translates to: QEPLRDVCTSTVGRTAQMNIDGV*VRLPVK
Trigger: TTTTACTGGAAGACGTACGCATACTCCATCGATGTT...CATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp CAGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATCAGATGCGCCTCTTCTaGGCAAGCACAGTGACAAGG +
Preference number: 2 (lower is better)
Translates to: QSHLAFASCDRNGSERTDQMRLF*ASTVTR
Trigger: CCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTG...ATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR CCA 90 bp GCACAGTGTAAAGGCACCGAAGCAACAAGAGGCAGCTTCACCCCAGAGGCCAGATCTCCCTTGCCTTTTTaGTCAGTCTCATTTGGCTTT +
Preference number: 2 (lower is better)
Translates to: AQCKGTEATRGSFTPEARSPLPF*SVSFGF
Trigger: AAAGCCAAATGAGACTGACCAAAAAGGCAAGGGAGA...TCTGGCCTCTGGGGTGAAGCTGCCTCTTGTTGCTTCGGTGCCTTTACACTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR CAA 90 bp ACAGCCATTGGAAGGACGATCTTGAGCAGGAAGGGTTTTTACTCGTaGTGTGTAGCTGAGGACAAGAAGCAGGCACAGTGTAAAGGCACC +
Preference number: 2 (lower is better)
Translates to: TAIGRTILSRKGFYS*CVAEDKKQAQCKGT
Trigger: GGTGCCTTTACACTGTGCCTGCTTCTTGTCCTCAGCTACACACAACGAGTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAATGGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR GCA 90 bp AACGAGGCCATCCCGGCGTCAGAAGCGGTCAGGCTGGGTTTGACAAGATCAGAAGGGAATACAAGGAGGTaGATTTACTACACATTAACG +
Preference number: 2 (lower is better)
Translates to: NEAIPASEAVRLGLTRSEGNTRR*IYYTLT
Trigger: CGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC...TTCTGATCTTGTCAAACCCAGCCTGACCGCTTCTGACGCCGGGATGGCCTCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
3UTR-3UTR GCA 90 bp ACACGGTCTTTTAATCGGCTTCGTAAAGCCAAAGAAAACTGCGTACAAGAATTCCCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGC +
Preference number: 2 (lower is better)
Translates to: TRSFNRLRKAKENCVQEFPLRDV*TSTVGR
Trigger: GCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG...GAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAGCCGATTAAAAGACCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp ATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACAACATCGATGGAGTATaGGTACGTCTTCCAGTAAAA +
Preference number: 2 (lower is better)
Translates to: IFKNLSGTSARLLWGAQHNIDGV*VRLPVK
Trigger: TTTTACTGGAAGACGTACGCATACTCCATCGATGTT...GTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp CCTCAGCCACTGCAAATACAACATCGATGGAGTATGCGTACGTCTTCCAGTAAAGTGTCCAGCCTAAAGTaGTTGGAGAGGGCACCAAGG +
Preference number: 2 (lower is better)
Translates to: PQPLQIQHRWSMRTSSSKVSSLK*LERAPR
Trigger: CCTTGGTGCCCTCTCCAAGCACTTTAGGCTGGACAC...TTTACTGGAAGACGTACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp TCCCTTGCCTTTTTGGTCAGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGCAGATGCGCCTCTTCTaGGCAAGCACAGTGACAAGG +
Preference number: 2 (lower is better)
Translates to: SLAFLVSLIWLLRPAIEMQMRLF*ASTVTR
Trigger: CCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTG...CATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAAAAGGCAAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR CCA 90 bp TTTTTGGTCAGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 2 (lower is better)
Translates to: FLVSLIWLLRPAIEMALRDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...TCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
3UTR-3UTR TCA 90 bp ACACGAGCGGAAGGAGTTACCTCGAATTACAGGGCTATTTCCACATATGAGCTATCGATCTCAGAGAAGTaGGTGGGGCACCCACTTCAT +
Preference number: 2 (lower is better)
Translates to: TRAEGVTSNYRAISTYELSISEK*VGHPLH
Trigger: ATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGA...TAGCTCATATGTGGAAATAGCCCTGTAATTCGAGGTAACTCCTTCCGCTCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR TCA 90 bp TTTTTGGTCAGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGCGCCCTCGGAGTGTaGCTTACCGTAACTGTCATA +
Preference number: 2 (lower is better)
Translates to: FLVSLIWLLRPAIEMALRGALGV*LTVTVI
Trigger: TATGACAGTTACGGTAAGTCACACTCCGAGGGCGCC...TCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR TCA 90 bp ATCTTGAGCAGGAAGGGTTTTTACTCGTTGTGTGTAGCTGAGGACAAGAAGCAGCTCGTTGTGTGTAGCTaGGGACAAGAAGCAGGCACA +
Preference number: 2 (lower is better)
Translates to: ILSRKGFYSLCVAEDKKQLVVCS*GQEAGT
Trigger: TGTGCCTGCTTCTTGTCCTCAGCTACACACAACGAG...CTGCTTCTTGTCCTCAGCTACACACAACGAGTAAAAACCCTTCCTGCTCAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR GCA 90 bp GAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTCAGGGAATACAAGGAGGTaGATTTACTACACATTAACG +
Preference number: 2 (lower is better)
Translates to: ERIHSPFDLREVSGAPTSGNTRR*IYYTLT
Trigger: CGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC...TGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp AAAGAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTGAATTCCTCAGCCACTaGAAATACAACATCGATGGA +
Preference number: 2 (lower is better)
Translates to: KERIHSPFDLREVSGAPTEFLSH*KYNIDG
Trigger: TCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTC...AGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp CTGGGTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCAAAGCCAAAGAAAACTaGGTACAAGAATTCCTCAGC +
Preference number: 2 (lower is better)
Translates to: LGAHVALYSNPTFTGLHIKAKEN*VQEFLS
Trigger: GCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTT...GATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR GCA 90 bp TACTCGTTGTGTGTAGCTGAGGACAAGAAGCAGGCACAGTGTAAAGGCACCGAATTGGCTTTTGCGTCCTaGGATAGAAATGGCTCTGAG +
Preference number: 2 (lower is better)
Translates to: YSLCVAEDKKQAQCKGTELAFAS*DRNGSE
Trigger: CTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAA...TTCGGTGCCTTTACACTGTGCCTGCTTCTTGTCCTCAGCTACACACAACGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR GCA 90 bp AGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGTGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 2 (lower is better)
Translates to: SLIWLLRPAIEMALRGQMWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...CATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
3UTR-3UTR GCA 90 bp TTTTTGGTCAGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGA +
Preference number: 2 (lower is better)
Translates to: FLVSLIWLLRPAIEMALRGCLTT*LPGLLG
Trigger: TCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACC...TCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
3UTR-3UTR CCA 90 bp GAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATTCTGCACGTCTACTGTaGGGCGCACAGCACAGATGG +
Preference number: 2 (lower is better)
Translates to: EYKEVHLLHINVQRSSHNSARLL*GAQHRW
Trigger: CCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGA...ATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp AAGGGAATTGTCAGAGCAAGGTTCATTTCACACGGTCTTTTAATCGGCTTCGTATCTGCACGTCTACTGTaGGGCGCACAGCACAGATGG +
Preference number: 2 (lower is better)
Translates to: KGIVRARFISHGLLIGFVSARLL*GAQHRW
Trigger: CCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGA...TACGAAGCCGATTAAAAGACCGTGTGAAATGAACCTTGCTCTGACAATTCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR CCA 90 bp CATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTTTGGTCAGTCTCATTTaGCTTTTGCGTCCTGCGATA +
Preference number: 2 (lower is better)
Translates to: HLAFASCDRNGSERTDAPLVSLI*LLRPAI
Trigger: TATCGCAGGACGCAAAAGCCAAATGAGACTGACCAA...AGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR TCA 90 bp GGGTTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTCACAGTGACAAGGTCTaGGTGTCCAGCCTAAAGTGC +
Preference number: 2 (lower is better)
Translates to: GFDKIRTEMTTKVGIQGGHSDKV*VSSLKC
Trigger: GCACTTTAGGCTGGACACTCAGACCTTGTCACTGTG...ACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR GCA 90 bp GAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATGTGTCCAGCCTAAAGTaGTTGGAGAGGGCACCAAGG +
Preference number: 2 (lower is better)
Translates to: EYKEVHLLHINVQRSSHNVSSLK*LERAPR
Trigger: CCTTGGTGCCCTCTCCAAGCACTTTAGGCTGGACAC...ATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR GCA 90 bp CAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACAGTGTCCAGCCTAAAGTaGTTGGAGAGGGCACCAAGG +
Preference number: 2 (lower is better)
Translates to: QNRNDYESGNTRRCIYYTVSSLK*LERAPR
Trigger: CCTTGGTGCCCTCTCCAAGCACTTTAGGCTGGACAC...TGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR CCA 90 bp AAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGTATTCTGCACGTCTACTGTaGGGCGCACAGCACAGATGG +
Preference number: 2 (lower is better)
Translates to: KTAYKNSSATANTTSMEYSARLL*GAQHRW
Trigger: CCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGA...ATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp GGTCTTTTAATCGGCTTCGTAAAGCCAAAGAAAACTGCGTACAAGAATTCCTCATCTGCACGTCTACTGTaGGGCGCACAGCACAGATGG +
Preference number: 2 (lower is better)
Translates to: GLLIGFVKPKKTAYKNSSSARLL*GAQHRW
Trigger: CCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGA...TGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAGCCGATTAAAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR TCA 90 bp CGGTCTTTTAATCGGCTTCGTAAAGCCAAAGAAAACTGCGTACAAGAATTCCTCTCGATCTCAGAGAAGTaGGTGGGGCACCCACTTCAT +
Preference number: 2 (lower is better)
Translates to: RSFNRLRKAKENCVQEFLSISEK*VGHPLH
Trigger: ATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGA...GAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAGCCGATTAAAAGACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR TCA 90 bp GATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACTCGATCTCAGAGAAGTaGGTGGGGCACCCACTTCAT +
Preference number: 2 (lower is better)
Translates to: DQNRNDYESGNTRRCIYYSISEK*VGHPLH
Trigger: ATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGA...GTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp TACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTGCCCTCGCTCTCCCTTaGCTTTTTGGTCAGTCTCAT +
Preference number: 2 (lower is better)
Translates to: YKEVHLLHINVQRSSHNLALALP*LFGQSH
Trigger: ATGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGC...AAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR TCA 90 bp GATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACCGGTCAGGCTGGGTTTaGCAAGATCAGAACCGAAAT +
Preference number: 2 (lower is better)
Translates to: DQNRNDYESGNTRRCIYYRSGWV*QDQNRN
Trigger: ATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCG...GTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
3UTR-3UTR TCA 90 bp CGTAAAGCCAAAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACCGGTCAGGCTGGGTTTaGCAAGATCAGAACCGAAAT +
Preference number: 2 (lower is better)
Translates to: RKAKENCVQEFLSHCKYNRSGWV*QDQNRN
Trigger: ATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCG...GTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR TCA 90 bp ATAAATAAACATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGAGATCAGAACCGAAATaGCTACGAAAGTGGGAATAC +
Preference number: 2 (lower is better)
Translates to: INKHLQEPLRDVCTSTVGRSEPK*LRKWEY
Trigger: GTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCT...CCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR TCA 90 bp AAAAAGGACAATATAAATAAACATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCGATCTCAGAGAAGTaGGTGGGGCACCCACTTCAT +
Preference number: 2 (lower is better)
Translates to: KKDNINKHLQEPLRDVCTSISEK*VGHPLH
Trigger: ATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGA...CGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTATTTATATTGTCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp GAGTGTGTGGTGCAATGCAAGGGAATTGTCAGAGCAAGGTTCATTTCACACGGTGGGAATACAAGGAGGTaGATTTACTACACATTAACG +
Preference number: 2 (lower is better)
Translates to: ECVVQCKGIVRARFISHGGNTRR*IYYTLT
Trigger: CGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC...ACCGTGTGAAATGAACCTTGCTCTGACAATTCCCTTGCATTGCACCACACACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR GCA 90 bp CTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGTATGCGTGAATTCCTCAGCCACTaGAAATACAACATCGATGGA +
Preference number: 2 (lower is better)
Translates to: LRTRIPQPLQIQHRWSMREFLSH*KYNIDG
Trigger: TCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTC...ACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp CTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGTATGCGTCAAATACAACATCGATaGAGTATGCGTACGTCTTCC +
Preference number: 2 (lower is better)
Translates to: LRTRIPQPLQIQHRWSMRQIQHR*SMRTSS
Trigger: GGAAGACGTACGCATACTCCATCGATGTTGTATTTG...ACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp CAAGGAGTGTGTGGTGCAATGCAAGGGAATTGTCAGAGCAAGGTTCATTTCACAAAAGCCAAAGAAAACTaGGTACAAGAATTCCTCAGC +
Preference number: 2 (lower is better)
Translates to: QGVCGAMQGNCQSKVHFTKAKEN*VQEFLS
Trigger: GCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTT...TGTGAAATGAACCTTGCTCTGACAATTCCCTTGCATTGCACCACACACTCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR GCA 90 bp AAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGTATTTGGCTTTTGCGTCCTaGGATAGAAATGGCTCTGAG +
Preference number: 2 (lower is better)
Translates to: KTAYKNSSATANTTSMEYLAFAS*DRNGSE
Trigger: CTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAA...ATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR TCA 90 bp TTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCAAGATCAGAACCGAAATaGCTACGAAAGTGGGAATAC +
Preference number: 2 (lower is better)
Translates to: FDKIRTEMTTKVGIQGGARSEPK*LRKWEY
Trigger: GTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCT...TGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
3UTR-3UTR GCA 90 bp TTTTTGGTCAGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGGAATACAAGGAGGTaGATTTACTACACATTAACG +
Preference number: 2 (lower is better)
Translates to: FLVSLIWLLRPAIEMALRGNTRR*IYYTLT
Trigger: CGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC...TCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR GCA 90 bp CTTCGTAAAGCCAAAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACGAATTCCTCAGCCACTaGAAATACAACATCGATGGA +
Preference number: 2 (lower is better)
Translates to: LRKAKENCVQEFLSHCKYEFLSH*KYNIDG
Trigger: TCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTC...GTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp GAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCAAATACAACATCGATaGAGTATGCGTACGTCTTCC +
Preference number: 2 (lower is better)
Translates to: EYKEVHLLHINVQRSSHNQIQHR*SMRTSS
Trigger: GGAAGACGTACGCATACTCCATCGATGTTGTATTTG...ATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp AAAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGACAAATACAACATCGATaGAGTATGCGTACGTCTTCC +
Preference number: 2 (lower is better)
Translates to: KENCVQEFLSHCKYNIDGQIQHR*SMRTSS
Trigger: GGAAGACGTACGCATACTCCATCGATGTTGTATTTG...TCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR GCA 72 bp AGGCGGGGGACCCGGCGCTCCCGGGAGGCGCTGCCCTaGACCCAACACACACCGAAAGGCGCCCGCCATGGG +
Preference number: 3 (lower is better)
Translates to: RRGTRRSREALP*TQHTPKGARHG
Trigger: CCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGCGCCGGGTCCCCCGCCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
3UTR CCA 72 bp CAGCTCCCCCAGGGACCTGGGACCCGGGACGGAAGCTaGCCATCCCGCAACCACCCCTGTGCTTGGGCCGGC +
Preference number: 3 (lower is better)
Translates to: QLPQGPGTRDGS*PSRNHPCAWAG
Trigger: GCCGGCCCAAGCACAGGGGTGGTTGCGGGATGGCCAGCTTCCGTCCCGGGTCCCAGGTCCCTGGGGGAGCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR-3UTR CAA 90 bp CAGGCCAGCATGCCCAGGGCGGGTCTGCACCTTGGCGCAGCTGGAGCCAGCTACGGGGCTCCAGGGCAGTaGCTGCCACACCCGCCGGGG +
Preference number: 3 (lower is better)
Translates to: QASMPRAGLHLGAAGASYGAPGQ*LPHPPG
Trigger: CCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCC...GTAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCATGCTGGCCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR TCA 72 bp CACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGA +
Preference number: 3 (lower is better)
Translates to: HRSPCSRRDSRP*ARTSLAKRLRG
Trigger: TCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR CAA 90 bp GGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCTGCCTCCAGCTCTaGTTCCAGGTGAAGTCCCTC +
Preference number: 3 (lower is better)
Translates to: GRPVSCRRTAARAPGETRGCLQL*FQVKSL
Trigger: GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCC...TCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR TCA 72 bp CACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCGAAGCGCCTCCTGGAA +
Preference number: 3 (lower is better)
Translates to: HRSPCSRRDSRP*ARTSLAKRLLE
Trigger: TTCCAGGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
3UTR TCA 72 bp CACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCGAAGCGCAGGGGACAA +
Preference number: 3 (lower is better)
Translates to: HRSPCSRRDSRP*ARTSLAKRRGQ
Trigger: TTGTCCCCTGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585913.5
3UTR-3UTR CAA 90 bp AGCTTCACCCCAGAGGCCAGACCAGGGCGCGGCCTGCGGCCGGGGAGCAACCACGGCCCTCGCTCTCCCTaGCCTTTTTGGTCAGTCTCA +
Preference number: 3 (lower is better)
Translates to: SFTPEARPGRGLRPGSNHGPRSP*PFWSVS
Trigger: TGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGCC...GTGGTTGCTCCCCGGCCGCAGGCCGCGCCCTGGTCTGGCCTCTGGGGTGAAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR TCA 72 bp CACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCGAAGCGCCTCTTACAG +
Preference number: 3 (lower is better)
Translates to: HRSPCSRRDSRP*ARTSLAKRLLQ
Trigger: CTGTAAGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585914.5
3UTR GCA 72 bp ACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTaGCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACT +
Preference number: 3 (lower is better)
Translates to: TSLWARTGRPVS*RRTAARAPGET
Trigger: AGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR GCA 72 bp AGGCTCCGTCACAGGCCAGCATGCCCAGGGCGGGTCTaGACCTTGGCGCAGCTGGAGCCAGCTACCCGTATG +
Preference number: 3 (lower is better)
Translates to: RLRHRPACPGRV*TLAQLEPATRM
Trigger: CATACGGGTAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCATGCTGGCCTGTGACGGAGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CCA 72 bp CCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTaGCGAAGCGCCTCAGGGGACAAGCCTCCTGGGCAA +
Preference number: 3 (lower is better)
Translates to: PGETRGPEPAPH*RSASGDKPPGQ
Trigger: TTGCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR CCA 72 bp ACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTaGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCG +
Preference number: 3 (lower is better)
Translates to: TFTGLHIVVGKD*PPRKLPAHRSP
Trigger: CGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR CCA 72 bp CCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTaGCGAAGCGCCTCCTGGAAGGAGGAGGAAGGGAGG +
Preference number: 3 (lower is better)
Translates to: PGETRGPEPAPH*RSASWKEEEGR
Trigger: CCTCCCTTCCTCCTCCTTCCAGGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
3UTR-3UTR CAA 90 bp GCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACGCGGTCAGGCTGGGTTaGACAAGATCAGAACCGAAA +
Preference number: 3 (lower is better)
Translates to: AGAPQPVLQERLEALSPHAVRLG*TRSEPK
Trigger: TTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGC...GTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR GCA 72 bp GAGGCTGGCCTGCGGCCACACATGCACCTAGCTGACTaGCCAGCGGGCCCTCGCTCTCCCTTGCCTTTTTGG +
Preference number: 3 (lower is better)
Translates to: EAGLRPHMHLAD*PAGPRSPLPFW
Trigger: CCAAAAAGGCAAGGGAGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGTGGCCGCAGGCCAGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR GCA 72 bp GCCCAGGTGCCGCCCGGGACAGGGCTCAGCGCCACATaGCACTCTTCCCGAAAGCACTTACAGGGGACAAGC +
Preference number: 3 (lower is better)
Translates to: AQVPPGTGLSAT*HSSRKHLQGTS
Trigger: GCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGCGCTGAGCCCTGTCCCGGGCGGCACCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
3UTR CCA 72 bp GTCACAGGCCAGCATGCCCAGGGCGGGTCTGCACCTTaGCGCAGCTGGAGCCAGCTACCCGTATGGGATGGA +
Preference number: 3 (lower is better)
Translates to: VTGQHAQGGSAP*RSWSQLPVWDG
Trigger: TCCATCCCATACGGGTAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCATGCTGGCCTGTGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CCA 72 bp CCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTaGCGAAGCGCCTCTTACAGGGGACAAGCCTCCTGG +
Preference number: 3 (lower is better)
Translates to: PGETRGPEPAPH*RSASYRGQASW
Trigger: CCAGGAGGCTTGTCCCCTGTAAGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585914.5
3UTR CCA 72 bp CGCACCTCACTGGCGAAGCGCAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTG +
Preference number: 3 (lower is better)
Translates to: RTSLAKRRGQAS*ASGCLQLLFQV
Trigger: CACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGCGCTTCGCCAGTGAGGTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585913.5
3UTR-3UTR CAA 90 bp CACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGAGTTGGAAAGGGGCTCCAGGGCAGTaGCTGCCACACCCGCCGGGG +
Preference number: 3 (lower is better)
Translates to: HPPGSYHTTLRNVTRSWKGAPGQ*LPHPPG
Trigger: CCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCC...TTTCCAACTCCGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR GCA 72 bp TCAGCGTCAGGTGCACGTCCACTGTCCCTGCTAAGCTaGCCGCACAGTCCAGCCCTCTGGCCACCACTGCCA +
Preference number: 3 (lower is better)
Translates to: SASGARPLSLLS*PHSPALWPPLP
Trigger: TGGCAGTGGTGGCCAGAGGGCTGGACTGTGCGGGCAGCTTAGCAGGGACAGTGGACGTGCACCTGACGCTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR GCA 72 bp ACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTaGGGGAGAGCAGGACTCACTGAAACGCCCAGGTGC +
Preference number: 3 (lower is better)
Translates to: THTERRPPWGHR*GRAGLTETPRC
Trigger: GCACCTGGGCGTTTCAGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
3UTR CCA 72 bp ACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTG +
Preference number: 3 (lower is better)
Translates to: TSLAKRLRGQAS*ASGCLQLLFQV
Trigger: CACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR CCA 72 bp CAGCATGCCCAGGGCGGGTCTGCACCTTGGCGCAGCTaGAGCCAGCTACCCGTATGGGATGGAGCTATGTGG +
Preference number: 3 (lower is better)
Translates to: QHAQGGSAPWRS*SQLPVWDGAMW
Trigger: CCACATAGCTCCATCCCATACGGGTAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCATGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CCA 72 bp GTCATCGCTGCTCTCAGGCCACCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCTGCCAAAGCAAAGCAGC +
Preference number: 3 (lower is better)
Translates to: VIAALRPPFPES*PGPFNLPKQSS
Trigger: GCTGCTTTGCTTTGGCAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGGTGGCCTGAGAGCAGCGATGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CCA 72 bp TGGGCCGGCCTCCCCCTCACCTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCACTCCTGGACTCGAACC +
Preference number: 3 (lower is better)
Translates to: WAGLPLTCYSSL*SLRSPHSWTRT
Trigger: GGTTCGAGTCCAGGAGTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCAGGTGAGGGGGAGGCCGGCCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR CCA 72 bp GACGGAAGCTGGCCATCCCGCAACCACCCCTGTGCTTaGGCCGGCCTCCCCCTCACCTGCTATAGTAGTCTC +
Preference number: 3 (lower is better)
Translates to: DGSWPSRNHPCA*AGLPLTCYSSL
Trigger: GAGACTACTATAGCAGGTGAGGGGGAGGCCGGCCCAAGCACAGGGGTGGTTGCGGGATGGCCAGCTTCCGTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR CCA 72 bp GCCCTGCACCCAACACACACCGAAAGGCGCCCGCCATaGGGCCATAGGTGCGGGAGAGCAGGACTCACTGAA +
Preference number: 3 (lower is better)
Translates to: ALHPTHTERRPP*GHRCGRAGLTE
Trigger: TTCAGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
3UTR-3UTR CAA 90 bp GGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTCCTGGGTCTCAGAGGGTTCTGTaGGGCGCACAACACTTCTGT +
Preference number: 3 (lower is better)
Translates to: GPEPAPHWRSASGDKPPGSQRVL*GAQHFC
Trigger: ACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGA...CCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000444172.6
ENST00000587169.5
ENST00000590347.5
3UTR TCA 72 bp GTGTCCAGCCTAAAGTGCTTGGAGAGGGCACCAAGGTaGACCGAGCTCCCACCGCAGGCCACAGCAGCGTGG +
Preference number: 3 (lower is better)
Translates to: VSSLKCLERAPR*TELPPQATAAW
Trigger: CCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTCTCCAAGCACTTTAGGCTGGACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR TCA 72 bp GGCAGAGCCACCACGGTACCCACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTCTACTCGGATCTGCCG +
Preference number: 3 (lower is better)
Translates to: GRATTVPTGSVV*RLACLVYSDLP
Trigger: CGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTACCGTGGTGGCTCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
3UTR TCA 72 bp AAGGTACCCGTCTACTTCTGCTCTGCCACAACAGGCTaGGCCGCCAGCCCCCATGCCAGCCGTCCCTTCTGG +
Preference number: 3 (lower is better)
Translates to: KVPVYFCSATTG*AASPHASRPFW
Trigger: CCAGAAGGGACGGCTGGCATGGGGGCTGGCGGCTCAGCCTGTTGTGGCAGAGCAGAAGTAGACGGGTACCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR GCA 72 bp CACCCTTCCCCGAGTCCTGGCCGGGCCCCTTCAACCTaGCAAAGCAAAGCAGCGTTACTCCCAACGTCCTCC +
Preference number: 3 (lower is better)
Translates to: HPSPSPGRAPST*QSKAALLPTSS
Trigger: GGAGGACGTTGGGAGTAACGCTGCTTTGCTTTGGCAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR GCA 72 bp GAGCAGTCTCCTCTCCTCTTGGCCTGGGTCCCCACCTaGCTCTGCTCCTTGCCCAGCCAGTCTCATCTCAGC +
Preference number: 3 (lower is better)
Translates to: EQSPLLLAWVPT*LCSLPSQSHLS
Trigger: GCTGAGATGAGACTGGCTGGGCAAGGAGCAGAGGCAGGTGGGGACCCAGGCCAAGAGGAGAGGAGACTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR CCA 72 bp CACTGGCGAAGCGCCTCTTACAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTG +
Preference number: 3 (lower is better)
Translates to: HWRSASYRGQAS*ASGCLQLLFQV
Trigger: CACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGAGGCGCTTCGCCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585914.5
3UTR-3UTR CAA 90 bp ACCGAAGCAACAAGAGGCAGCTTCACCCCAGAGGCCAGACCAGGGCGCGGCCTGGGCCCTCGCTCTCCCTaGCCTTTTTGGTCAGTCTCA +
Preference number: 3 (lower is better)
Translates to: TEATRGSFTPEARPGRGLGPRSP*PFWSVS
Trigger: TGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGCC...CAGGCCGCGCCCTGGTCTGGCCTCTGGGGTGAAGCTGCCTCTTGTTGCTTCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR CAA 90 bp ACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTTCTCAGAGGGTTCTGTaGGGCGCACAACACTTCTGT +
Preference number: 3 (lower is better)
Translates to: TRGPEPAPHWRSASGDKPSQRVL*GAQHFC
Trigger: ACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGA...AGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000444172.6
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR CAA 90 bp CTGAGAGGACAGATGCGCCTCTTCTGGGCAAGCACAGTGACAAGGTCTGAGTGTCAACCACCCCTGTGCTaGGGCCGGCCTCCCCCTCAC +
Preference number: 3 (lower is better)
Translates to: LRGQMRLFWASTVTRSECQPPLC*GRPPPH
Trigger: GTGAGGGGGAGGCCGGCCCAAGCACAGGGGTGGTTG...ACACTCAGACCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTGTCCTCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR TCA 72 bp CCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGTGACCCCAGAGGTCAT +
Preference number: 3 (lower is better)
Translates to: PGQAAASSSCSR*SPSWDSDPRGH
Trigger: ATGACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
ENST00000592234.5
3UTR TCA 72 bp GAAGCAACAGCAGAACTAGCTAACCGGCTGGCCGTCTaGGGTCGCCCTGGGATGCCACGTGCCTCTGCTCTC +
Preference number: 3 (lower is better)
Translates to: EATAELANRLAV*GRPGMPRASAL
Trigger: GAGAGCAGAGGCACGTGGCATCCCAGGGCGACCTCAGACGGCCAGCCGGTTAGCTAGTTCTGCTGTTGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CCA 72 bp TTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTaGGGCGCACAGCACAGATGGACGCAGGGGCTGGGG +
Preference number: 3 (lower is better)
Translates to: FKNLSGTSARLL*GAQHRWTQGLG
Trigger: CCCCAGCCCCTGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR CCA 72 bp GTCATCGCTGCTCTCAGGCCACCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCTCGAATTACAGGGCTAT +
Preference number: 3 (lower is better)
Translates to: VIAALRPPFPES*PGPFNLELQGY
Trigger: ATAGCCCTGTAATTCGAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGGTGGCCTGAGAGCAGCGATGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000592234.5
3UTR CCA 72 bp ATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTaGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGC +
Preference number: 3 (lower is better)
Translates to: IRIRLSQGSTSL*ARTGRPVSCRR
Trigger: GCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR CAA 90 bp GACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGACGCAGGGGCTGGGTCTCAGAGGGTTCTGTaGGGCGCACAACACTTCTGT +
Preference number: 3 (lower is better)
Translates to: DVCTSTVGRTAQMDAGAGSQRVL*GAQHFC
Trigger: ACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGA...CCCAGCCCCTGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR CAA 90 bp CCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGAGTTGGGGCTGCCTCCAGCTCTaGTTCCAGGTGAAGTCCCTC +
Preference number: 3 (lower is better)
Translates to: PHPPGSYHTTLRNVTRSWGCLQL*FQVKSL
Trigger: GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCC...CCAACTCCGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR GCA 72 bp CCTCCCTTTCTAGCTCTGCAGGCCCCAGGGAAGGCTTaGAGACCCGCTGCTTCTCCACCTTCTCTCTCTGCT +
Preference number: 3 (lower is better)
Translates to: PPFLALQAPGKA*RPAASPPSLSA
Trigger: AGCAGAGAGAGAAGGTGGAGAAGCAGCGGGTCTGCAAGCCTTCCCTGGGGCCTGCAGAGCTAGAAAGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CCA 72 bp AGCCAAGGGAGCAGCTTGCGTCTCAGAGGGTTCTGTTaGGCGCACAACACTTCTGTCCTCCGAGGGCTGCAG +
Preference number: 3 (lower is better)
Translates to: SQGSSLRLRGFC*AHNTSVLRGLQ
Trigger: CTGCAGCCCTCGGAGGACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGACGCAAGCTGCTCCCTTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CCA 72 bp TCTGCACCTTGGCGCAGCTGGAGCCAGCTACCCGTATaGGATGGAGCTATGTGGGCCAGTGTGGGCTCTAGA +
Preference number: 3 (lower is better)
Translates to: SAPWRSWSQLPV*DGAMWASVGSR
Trigger: TCTAGAGCCCACACTGGCCCACATAGCTCCATCCCATACGGGTAGCTGGCTCCAGCTGCGCCAAGGTGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CCA 72 bp AGCCACCACTCTGACTCCGGCTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCACTCCTGGACTCGAACC +
Preference number: 3 (lower is better)
Translates to: SHHSDSGCYSSL*SLRSPHSWTRT
Trigger: GGTTCGAGTCCAGGAGTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCAGCCGGAGTCAGAGTGGTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
3UTR CCA 72 bp GTCATCGCTGCTCTCAGGCCACCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCGTAACTGTCATAACTGT +
Preference number: 3 (lower is better)
Translates to: VIAALRPPFPES*PGPFNRNCHNC
Trigger: ACAGTTATGACAGTTACGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGGTGGCCTGAGAGCAGCGATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591376.5
3UTR-3UTR CAA 90 bp GCTCCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAGCGGTCAGGCTGGGTTaGACAAGATCAGAACCGAAA +
Preference number: 3 (lower is better)
Translates to: APGQLLPHPPGSYHTTLRAVRLG*TRSEPK
Trigger: TTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGC...TCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR CAA 90 bp CTGGGTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCCAGGGCTCCACATCGTaGTGGGCAAGGACTGGCCGC +
Preference number: 3 (lower is better)
Translates to: LGAHVALYSNPTFTGLHIQGSTS*WARTGR
Trigger: GCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTG...GATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR CAA 90 bp GTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGGCCCTCGCTCTCCCTaGCCTTTTTGGTCAGTCTCA +
Preference number: 3 (lower is better)
Translates to: VAATPAGVLPHYTQKRHTGPRSP*PFWSVS
Trigger: TGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGCC...CGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
3UTR GCA 72 bp CACCACGGTACCCACGGGATCGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGATCTGCCGTCCATCTA +
Preference number: 3 (lower is better)
Translates to: HHGTHGIGCLTT*LPGLLGSAVHL
Trigger: TAGATGGACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTACCGTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
3UTR CCA 72 bp ACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTG +
Preference number: 3 (lower is better)
Translates to: TLPESTYRGQAS*ASGCLQLLFQV
Trigger: CACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
3UTR-3UTR CAA 90 bp CTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGTATGCGTGGGGCTCCAGGGCAGTaGCTGCCACACCCGCCGGGG +
Preference number: 3 (lower is better)
Translates to: LRTRIPQPLQIQHRWSMRGAPGQ*LPHPPG
Trigger: CCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCC...ACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR TCA 72 bp CACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTaGCTTACCGTAACTGTCATAACTGTCTCTGTAGGA +
Preference number: 3 (lower is better)
Translates to: HRRPQQRGALGV*LTVTVITVSVG
Trigger: TCCTACAGAGACAGTTATGACAGTTACGGTAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR CAA 90 bp CTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTCTTCTGGTACCCACGGGATCGGTaGTCTGACGACTTGCCTGCC +
Preference number: 3 (lower is better)
Translates to: LLRPAIEMALRGQMRLFWYPRDR*SDDLPA
Trigger: GGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTA...CCAGAAGAGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
3UTR TCA 72 bp GATGCGCCTCTTCTGGGCAAGCACAGTGACAAGGTCTaGGTGTCCAGCCTAAAGTGCTTGGAGAGGGCACCA +
Preference number: 3 (lower is better)
Translates to: DAPLLGKHSDKV*VSSLKCLERAP
Trigger: TGGTGCCCTCTCCAAGCACTTTAGGCTGGACACTCAGACCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR CAA 90 bp TGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGCTGCCTCCAGCTCTaGTTCCAGGTGAAGTCCCTC +
Preference number: 3 (lower is better)
Translates to: CTRGPLFESDFHRAPHRCGCLQL*FQVKSL
Trigger: GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCC...ACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR CAA 90 bp CCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGACGCAAGTCTCATTTGGCTTTaGCGTCCTGCGATAGAAATG +
Preference number: 3 (lower is better)
Translates to: PLRDVCTSTVGRTAQMDASLIWL*RPAIEM
Trigger: CATTTCTATCGCAGGACGCAAAAGCCAAATGAGACT...TGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
3UTR TCA 72 bp AGGCCATCCCGGCGTCAGAAGCGGTCAGGCTGGGTTTaGCAAGATCAGAACCGAAATGACTACGAAAGTGGG +
Preference number: 3 (lower is better)
Translates to: RPSRRQKRSGWV*QDQNRNDYESG
Trigger: CCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGCTTCTGACGCCGGGATGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
3UTR TCA 72 bp CACCACTCTGACTCCGGCTGCAAGACAGACAAACGTTaGGTACCGGAAGGTACCCGTCTACTTCTGCTCTGC +
Preference number: 3 (lower is better)
Translates to: HHSDSGCKTDKR*VPEGTRLLLLC
Trigger: GCAGAGCAGAAGTAGACGGGTACCTTCCGGTACTCAACGTTTGTCTGTCTTGCAGCCGGAGTCAGAGTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR GCA 72 bp TCTGTTGGGCGCACAACACTTCTGTCCTCCGAGGGCTaGAGCTTCCATAGGCTAGCAGAGAATGCTCAGAAC +
Preference number: 3 (lower is better)
Translates to: SVGRTTLLSSEG*SFHRLAENAQN
Trigger: GTTCTGAGCATTCTCTGCTAGCCTATGGAAGCTGCAGCCCTCGGAGGACAGAAGTGTTGTGCGCCCAACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR CAA 90 bp TTGTGTGTAGCTGAGGACAAGAAGCAGGCACAGTGTAAAGGCACCGAAGCAACATACCCACGGGATCGGTaGTCTGACGACTTGCCTGCC +
Preference number: 3 (lower is better)
Translates to: LCVAEDKKQAQCKGTEATYPRDR*SDDLPA
Trigger: GGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTA...TGTTGCTTCGGTGCCTTTACACTGTGCCTGCTTCTTGTCCTCAGCTACACACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR TCA 72 bp AGTCACAGGAACATTCCCCGGGCACATGACTTTCAGTaGGCTCTCAACAAGAGGGATGTGGACACGAGCGGA +
Preference number: 3 (lower is better)
Translates to: SHRNIPRAHDFQ*ALNKRDVDTSG
Trigger: TCCGCTCGTGTCCACATCCCTCTTGTTGAGAGCTCACTGAAAGTCATGTGCCCGGGGAATGTTCCTGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR GCA 72 bp GCTGCAGGAGCCCGCAGCAAGGAGTGTGTGGTGCAATaGAAGGGAATTGTCAGAGCAAGGTTCATTTCACAC +
Preference number: 3 (lower is better)
Translates to: AAGARSKECVVQ*KGIVRARFISH
Trigger: GTGTGAAATGAACCTTGCTCTGACAATTCCCTTGCATTGCACCACACACTCCTTGCTGCGGGCTCCTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CCA 72 bp ATAGAAATGGCTCTGAGAGGACAGATGCGCCTCTTCTaGGCAAGCACAGTGACAAGGTCTGAGTGTCCAGCC +
Preference number: 3 (lower is better)
Translates to: IEMALRGQMRLF*ASTVTRSECPA
Trigger: GGCTGGACACTCAGACCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTGTCCTCTCAGAGCCATTTCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR CAA 90 bp AGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGGTTGTCTGACGACTaGCCTGCCTGGTCTACTCGG +
Preference number: 3 (lower is better)
Translates to: SLIWLLRPAIEMALRGQMRLSDD*PAWSTR
Trigger: CCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCG...CATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
3UTR TCA 72 bp CCCTTCAACCTCGAATTACAGGGCTATTTCCACATATaGGCTAGCCAAGGGAGCAGCTTGCGTCTCAGAGGG +
Preference number: 3 (lower is better)
Translates to: PFNLELQGYFHI*ASQGSSLRLRG
Trigger: CCCTCTGAGACGCAAGCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGCCCTGTAATTCGAGGTTGAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444172.6
ENST00000585914.5
3UTR-3UTR CAA 90 bp AGCAGGCACAGTGTAAAGGCACCGAAGCAACAAGAGGCAGCTTCACCCCAGAGGAAGGGTTTTTACTCGTaGTGTGTAGCTGAGGACAAG +
Preference number: 3 (lower is better)
Translates to: SRHSVKAPKQQEAASPQRKGFYS*CVAEDK
Trigger: CTTGTCCTCAGCTACACACAACGAGTAAAAACCCTT...CCTCTGGGGTGAAGCTGCCTCTTGTTGCTTCGGTGCCTTTACACTGTGCCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR CAA 90 bp AAACACACAGCCATTGGAAGGACGATCTTGAGCAGGAAGGGTTTTTACTCGTTGCGGTTGTCTGACGACTaGCCTGCCTGGTCTACTCGG +
Preference number: 3 (lower is better)
Translates to: KHTAIGRTILSRKGFYSLRLSDD*PAWSTR
Trigger: CCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCG...CAACGAGTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAATGGCTGTGTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR TCA 72 bp AGGAGTTACCTCGAATTACAGGGCTATTTCCACATATaGGCTAGCCAAGGGAGCAGCTTGCGTCTCAGAGGG +
Preference number: 3 (lower is better)
Translates to: RSYLELQGYFHI*ASQGSSLRLRG
Trigger: CCCTCTGAGACGCAAGCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGCCCTGTAATTCGAGGTAACTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR CAA 90 bp CGGCTGCAAGACAGACAAACGTTGAGTACCGGAAGGTACCCGTCTACTTCTGCTAAGGGTTTTTACTCGTaGTGTGTAGCTGAGGACAAG +
Preference number: 3 (lower is better)
Translates to: RLQDRQTLSTGRYPSTSAKGFYS*CVAEDK
Trigger: CTTGTCCTCAGCTACACACAACGAGTAAAAACCCTT...AGCAGAAGTAGACGGGTACCTTCCGGTACTCAACGTTTGTCTGTCTTGCAGCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR GCA 72 bp TGCCTTTTTGGTCAGTCTCATTTGGCTTTTGCGTCCTaGGATAGAAATGGCTCTGAGAGGACAGATGCGCCT +
Preference number: 3 (lower is better)
Translates to: CLFGQSHLAFAS*DRNGSERTDAP
Trigger: AGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAAAAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR GCA 72 bp ATCCAAAAGGCGGGGGCGTTCACTGGTCTTCAATCCTaGTTAAGGGATTTCATCTATGAGCCAGGCATGACT +
Preference number: 3 (lower is better)
Translates to: IQKAGAFTGLQS*LRDFIYEPGMT
Trigger: AGTCATGCCTGGCTCATAGATGAAATCCCTTAAGCAGGATTGAAGACCAGTGAACGCCCCCGCCTTTTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CCA 72 bp CACATGACTTTCAGTGAGCTCTCAACAAGAGGGATGTaGACACGAGCGGAAGGAGTTACCTCGAATTACAGG +
Preference number: 3 (lower is better)
Translates to: HMTFSELSTRGM*TRAEGVTSNYR
Trigger: CCTGTAATTCGAGGTAACTCCTTCCGCTCGTGTCCACATCCCTCTTGTTGAGAGCTCACTGAAAGTCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR CAA 90 bp TTCCTCAGCCACTGCAAATACAACATCGATGGAGTATGCGTACGTCTTCCAGTATCTCAGAGGGTTCTGTaGGGCGCACAACACTTCTGT +
Preference number: 3 (lower is better)
Translates to: FLSHCKYNIDGVCVRLPVSQRVL*GAQHFC
Trigger: ACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGA...TACTGGAAGACGTACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR CAA 90 bp GGGTTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCGGTCAGGCTGGGTTaGACAAGATCAGAACCGAAA +
Preference number: 3 (lower is better)
Translates to: GFDKIRTEMTTKVGIQGGAVRLG*TRSEPK
Trigger: TTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGC...ACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
3UTR-3UTR CAA 90 bp AGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGTTTGGTCAGTCTCATTaGGCTTTTGCGTCCTGCGAT +
Preference number: 3 (lower is better)
Translates to: SLIWLLRPAIEMALRGQMFGQSH*AFASCD
Trigger: ATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAA...CATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR CAA 90 bp AGCCAAAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGAGCGGTCAGGCTGGGTTaGACAAGATCAGAACCGAAA +
Preference number: 3 (lower is better)
Translates to: SQRKLRTRIPQPLQIQHRAVRLG*TRSEPK
Trigger: TTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGC...TCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR CAA 90 bp GAGTGTGTGGTGCAATGCAAGGGAATTGTCAGAGCAAGGTTCATTTCACACGGTATTGGAAGGACGATCTaGAGCAGGAAGGGTTTTTAC +
Preference number: 3 (lower is better)
Translates to: ECVVQCKGIVRARFISHGIGRTI*SRKGFY
Trigger: GTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAAT...ACCGTGTGAAATGAACCTTGCTCTGACAATTCCCTTGCATTGCACCACACACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
3UTR TCA 72 bp GCGGTCAGGCTGGGTTTGACAAGATCAGAACCGAAATaGCTACGAAAGTGGGAATACAAGGAGGTGCATTTA +
Preference number: 3 (lower is better)
Translates to: AVRLGLTRSEPK*LRKWEYKEVHL
Trigger: TAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
3UTR-3UTR CAA 90 bp ACACGGTCTTTTAATCGGCTTCGTAAAGCCAAAGAAAACTGCGTACAAGAATTCGCGGTCAGGCTGGGTTaGACAAGATCAGAACCGAAA +
Preference number: 3 (lower is better)
Translates to: TRSFNRLRKAKENCVQEFAVRLG*TRSEPK
Trigger: TTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGC...GAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAGCCGATTAAAAGACCGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR GCA 72 bp AACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTaGATTTACTACACATTAACGTTCAGCGAAGCTCCC +
Preference number: 3 (lower is better)
Translates to: NRNDYESGNTRR*IYYTLTFSEAP
Trigger: GGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
3UTR-3UTR CAA 90 bp TACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTATTGGAAGGACGATCTaGAGCAGGAAGGGTTTTTAC +
Preference number: 3 (lower is better)
Translates to: YKEVHLLHINVQRSSHNLIGRTI*SRKGFY
Trigger: GTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAAT...AAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
3UTR TCA 72 bp CGGCAACAGACATCAGAGAAAGCTAAGTTAAGAGTGTaGCTTAAAGAGGTCTGGAAAAGACGGTCAATTGAG +
Preference number: 3 (lower is better)
Translates to: RQQTSEKAKLRV*LKEVWKRRSIE
Trigger: CTCAATTGACCGTCTTTTCCAGACCTCTTTAAGTCACACTCTTAACTTAGCTTTCTCTGATGTCTGTTGCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR GCA 72 bp CGGTCTTTTAATCGGCTTCGTAAAGCCAAAGAAAACTaGGTACAAGAATTCCTCAGCCACTGCAAATACAAC +
Preference number: 3 (lower is better)
Translates to: RSFNRLRKAKEN*VQEFLSHCKYN
Trigger: GTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAGCCGATTAAAAGACCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp CAGGCGGGGGACCCGGCGCTCCCGGGAGGCGCTGCCCTGCACCCAACACACACCGAGAGCAGGACTCACTaGAACGCCCAGGTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: QAGDPALPGGAALHPTHTESRTH*NAQVPP
Trigger: GGGCGGCACCTGGGCGTTTCAGTGAGTCCTGCTCTC...GGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGCGCCGGGTCCCCCGCCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR GCA 90 bp GTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCGCGCACCGCAGCCCGTaGTCCAGGAGAGACTCGAGG +
Preference number: 4 (lower is better)
Translates to: VGKDWPPRKLPAHRSPCSAHRSP*SRRDSR
Trigger: CCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGC...GGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp GGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGCCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCTC +
Preference number: 4 (lower is better)
Translates to: GKDWPPRKLPAHRSPCSRPFPES*PGPFNL
Trigger: GAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGG...CCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000592234.5
CDS-3UTR TCA 90 bp GGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGATGCCATGGCGGCCACTaGGTCGGGCAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: GRPVSCRRTAARAPGETRCHGGH*VGQVPD
Trigger: GTCAGGGACCTGCCCGACTCAGTGGCCGCCATGGCA...TCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR TCA 90 bp TGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGTGCCATGGCGGCCACTaGGTCGGGCAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: WPPRKLPAHRSPCSRRDSCHGGH*VGQVPD
Trigger: GTCAGGGACCTGCCCGACTCAGTGGCCGCCATGGCA...CGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR TCA 90 bp CGGCGCTCCCGGGAGGCGCTGCCCTGCACCCAACACACACCGAAAGGCGCCCGCACACATGCACCTAGCTaGCTGCCCAGCGGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: RRSREALPCTQHTPKGARTHAPS*LPSGPS
Trigger: CGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGT...GCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGCGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587896.6
CDS-3UTR GCA 90 bp AGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCGCACCGCAGCCCGTaGTCCAGGAGAGACTCGAGG +
Preference number: 4 (lower is better)
Translates to: SCRRTAARAPGETRGPEPAHRSP*SRRDSR
Trigger: CCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGC...GGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR GCA 90 bp GGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGATGCCCAGGGCGGGTCTaGACCTTGGCGCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GRPVSCRRTAARAPGETRCPGRV*TLAQLE
Trigger: CTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCA...TCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp CAGGCGGGGGACCCGGCGCTCCCGGGAGGCGCTGCCCTGCACCCAACACACACCCGGGAGGCGCTGCCCTaGACCCAACACACACCGAAA +
Preference number: 4 (lower is better)
Translates to: QAGDPALPGGAALHPTHTREALP*TQHTPK
Trigger: TTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCG...GGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGCGCCGGGTCCCCCGCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp GTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: VGKDWPPRKLPAHRSPCSRGQAS*ASGCLQ
Trigger: CTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT...GGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp GCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGGGCTCCACATCGTTGTaGGCAAGGACTGGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: AAGAPQPVLQERLEALSPGSTSL*ARTGRP
Trigger: GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCC...CGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp TGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCACCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCTG +
Preference number: 4 (lower is better)
Translates to: WARTGRPVSCRRTAARAPPFPES*PGPFNL
Trigger: CAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGG...TGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp TCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTTGCCATGGCGGCCACTaGGTCGGGCAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: SLWARTGRPVSCRRTAARCHGGH*VGQVPD
Trigger: GTCAGGGACCTGCCCGACTCAGTGGCCGCCATGGCA...ACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR TCA 90 bp GCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTCCTGGGCAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 4 (lower is better)
Translates to: ALSPHLTGEAPQGTSLLGRDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...GCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR GCA 90 bp GGCACCAAGGTGAACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGCTCCAGGGCAGTTGCTaGCACACCCGCCGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: GTKVNRAPTAGHSSVAPSLQGSC*HTRRGP
Trigger: AGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAG...CGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTTGGTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp GGGCTGGGGCTCCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTAGGGCTCCAGGGCAGTTaGTGCCACACCCGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: GLGLQGSCCHTRRGPTTLGLQGS*CHTRRG
Trigger: ACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCC...TAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCCAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp ATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGGCGCACCGCAGCCCGTaGTCCAGGAGAGACTCGAGG +
Preference number: 4 (lower is better)
Translates to: IVVGKDWPPRKLPAHRSPAHRSP*SRRDSR
Trigger: CCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGC...CGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp CGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: RPVSCRRTAARAPGETRGRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...GCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp TGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGCAGGCCACAGCAGCGTaGCGCCCTCGGAGTGTGACT +
Preference number: 4 (lower is better)
Translates to: WPPRKLPAHRSPCSRRDSQATAA*RPRSVT
Trigger: AGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTG...CGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp TTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTGAGCCCGCACCTCACTaGCGAAGCGCCTCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: LWARTGRPVSCRRTAARAEPAPH*RSASGD
Trigger: GTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTC...AGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp CCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCGTTGTGGGCAAGGACTaGCCGCCCCGTAAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: PRKLPAHRSPCSRRDSRPVVGKD*PPRKLP
Trigger: CGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAAC...GGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR TCA 90 bp GCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCTGCCATGGCGGCCACTaGGTCGGGCAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: ARAPGETRGPEPAPHWRSCHGGH*VGQVPD
Trigger: GTCAGGGACCTGCCCGACTCAGTGGCCGCCATGGCA...GCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR TCA 90 bp CGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACGAGAGGGCACCAAGGTaGACCGAGCTCCCACCGCAG +
Preference number: 4 (lower is better)
Translates to: RTAARAPGETRGPEPAPHERAPR*TELPPQ
Trigger: CTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTCTC...GTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp CGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTTCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: RRTAARAPGETRGPEPAPSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...AGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR TCA 90 bp CGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTCCTAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 4 (lower is better)
Translates to: RGPEPAPHWRSASGDKPPRDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...AGGAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR TCA 90 bp GTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 4 (lower is better)
Translates to: VSCRRTAARAPGETRGPERDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...CTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR GCA 90 bp CTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGCTCCAGGGCAGTTaGTGCCACACCCGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: LQERLEALSPHLTGEAPQGLQGS*CHTRRG
Trigger: ACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCC...CTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp TGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGATGCACCTAGCTGACTaGCCAGCGGGCCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: WPPRKLPAHRSPCSRRDSMHLAD*PAGPRS
Trigger: AGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCAT...CGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp CGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTGAGGTCGCCCTGGGATaGCACGTGCCTCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: RRTAARAPGETRGPEPAPEVALG*HVPLLS
Trigger: AGAGAGCAGAGGCACGTGGCATCCCAGGGCGACCTC...AGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp GGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGTCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: GKDWPPRKLPAHRSPCSRSWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...CCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR GCA 90 bp GCCCTGAGCCCGCACCTCACTGGCGAAGCGCAGGGGACAAGCCTCCTGGGCAAGGCGCACCGCAGCCCGTaGTCCAGGAGAGACTCGAGG +
Preference number: 4 (lower is better)
Translates to: ALSPHLTGEAQGTSLLGKAHRSP*SRRDSR
Trigger: CCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGC...CTTGCCCAGGAGGCTTGTCCCCTGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585913.5
CDS-3UTR GCA 90 bp GGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCGCACCGCAGCCCGTaGTCCAGGAGAGACTCGAGG +
Preference number: 4 (lower is better)
Translates to: GSTSLWARTGRPVSCRRTAHRSP*SRRDSR
Trigger: CCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGC...GGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR GCA 90 bp GGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACGCTCCCGGGAGGCGCTaGCCTGCACCCAACACACAC +
Preference number: 4 (lower is better)
Translates to: GLHIVVGKDWPPRKLPAHAPGRR*PAPNTH
Trigger: GTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGC...GTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp GAGGGCACCAAGGTGAACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: EGTKVNRAPTAGHSSVAPRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...GGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CCA 90 bp GCCCGCACCTCACTGGCGAAGCGCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCGGCTCCACATCGTTGTaGGCAAGGACTGGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: ARTSLAKRRGQASWASGCGSTSL*ARTGRP
Trigger: GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCC...GCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGCGCTTCGCCAGTGAGGTGCGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585913.5
CDS-3UTR CCA 90 bp CCAGCATGCCCAGGGCGGGTCTGCACCTTGGCGCAGCTGGAGCCAGCTACCCGTCCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCTG +
Preference number: 4 (lower is better)
Translates to: PACPGRVCTLAQLEPATRPFPES*PGPFNL
Trigger: CAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGG...ACGGGTAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCATGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp CACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCGT +
Preference number: 4 (lower is better)
Translates to: HIVVGKDWPPRKLPAHRSPFPES*PGPFNR
Trigger: ACGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGG...GCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000589235.5
ENST00000591376.5
CDS-3UTR TCA 90 bp CGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTCCTAGTCGGGCAGGTCCCTaGCGCAAGCGGGAAGACAGC +
Preference number: 4 (lower is better)
Translates to: RGPEPAPHWRSASGDKPPSRAGP*RKREDS
Trigger: GCTGTCTTCCCGCTTGCGTCAGGGACCTGCCCGACT...AGGAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR TCA 90 bp CAGCTTCACCCCAGAGGCCAGACCAGGGCGCGGCCTGCGGCCGGGGAGCAACCAACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: QLHPRGQTRARPAAGEQPTGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...TGGTTGCTCCCCGGCCGCAGGCCGCGCCCTGGTCTGGCCTCTGGGGTGAAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000591097.5
CDS-3UTR TCA 90 bp CCTCCTCCTCTAGAGAACCCACGGCCCCGTCCTCGGCCCCCACGGAAGAAGCCCGAGAGGGCACCAAGGTaGACCGAGCTCCCACCGCAG +
Preference number: 4 (lower is better)
Translates to: PPPLENPRPRPRPPRKKPERAPR*TELPPQ
Trigger: CTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTCTC...GGGCTTCTTCCGTGGGGGCCGAGGACGGGGCCGTGGGTTCTCTAGAGGAGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
CDS-3UTR TCA 90 bp GGGAGGCGCTGCCCTGCACCCAACACACACCGAAAGGCGCCCGCCATGGGGCCATCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: GRRCPAPNTHRKAPAMGPSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...TGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR TCA 90 bp GGCACCAAGGTGAACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGCTAGTCAGGGGGCTGTaGCCTCAGGCTCCGTCACAG +
Preference number: 4 (lower is better)
Translates to: GTKVNRAPTAGHSSVAPSLVRGL*PQAPSQ
Trigger: CTGTGACGGAGCCTGAGGTCACAGCCCCCTGACTAG...CGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTTGGTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp ACCGAAGCAACAAGAGGCAGCTTCACCCCAGAGGCCAGACCAGGGCGCGGCCTGGGGCTCCAGGGCAGTTaGTGCCACACCCGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: TEATRGSFTPEARPGRGLGLQGS*CHTRRG
Trigger: ACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCC...CAGGCCGCGCCCTGGTCTGGCCTCTGGGGTGAAGCTGCCTCTTGTTGCTTCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp GGCACCAAGGTGAACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGCCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: GTKVNRAPTAGHSSVAPSPLRDV*TSTVGR
Trigger: GCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG...CGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTTGGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp AAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAATGCACCTAGCTGACTaGCCAGCGGGCCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: KDWPPRKLPAHRSPCSRRMHLAD*PAGPRS
Trigger: AGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCAT...TCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp AGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCTCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SCRRTAARAPGETRGPEPSWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...GGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR GCA 90 bp GGACCCGGCGCTCCCGGGAGGCGCTGCCCTGCACCCAACACACACCGAAAGGCGCCATGGGGCCATAGGTaGGGGAGAGCAGGACTCACT +
Preference number: 4 (lower is better)
Translates to: GPGAPGRRCPAPNTHRKAPWGHR*GRAGLT
Trigger: AGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGG...CGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGCGCCGGGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR GCA 90 bp GCTGCCCTGCACCCAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGCTCCCGGGAGGCGCTaGCCTGCACCCAACACACAC +
Preference number: 4 (lower is better)
Translates to: AALHPTHTERRPPWGHRCAPGRR*PAPNTH
Trigger: GTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGC...GCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR GCA 90 bp GGCACCAAGGTGAACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGCGTTGACACGCACCTaGGCACACCTGCCGCTTTGC +
Preference number: 4 (lower is better)
Translates to: GTKVNRAPTAGHSSVAPSALTRT*AHLPLC
Trigger: GCAAAGCGGCAGGTGTGCGCAGGTGCGTGTCAACGC...CGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTTGGTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586548.5
CDS-3UTR CCA 90 bp ACCGGCTGGCCGTCTGAGGTCGCCCTGGGATGCCACGTGCCTCTGCTCTCTGGCCAGGCCACAGCAGCGTaGCGCCCTCGGAGTGTGACT +
Preference number: 4 (lower is better)
Translates to: TGWPSEVALGCHVPLLSGQATAA*RPRSVT
Trigger: AGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTG...GCCAGAGAGCAGAGGCACGTGGCATCCCAGGGCGACCTCAGACGGCCAGCCGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp CGCACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCACAGCCGAGGGAGGCTaGCCTGCGGCCACACATGCA +
Preference number: 4 (lower is better)
Translates to: RTSLAKRLRGQASWASGCTAEGG*PAATHA
Trigger: TGCATGTGTGGCCGCAGGCCAGCCTCCCTCGGCTGT...GCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR CCA 90 bp ACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: TAARAPGETRGPEPAPHWRGQAS*ASGCLQ
Trigger: CTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT...CCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp TCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGAGCCCGCACCTCACTaGCGAAGCGCCTCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: STSLWARTGRPVSCRRTAEPAPH*RSASGD
Trigger: GTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTC...TGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp CTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCGGCTCCACATCGTTGTaGGCAAGGACTGGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: LHIVVGKDWPPRKLPAHRGSTSL*ARTGRP
Trigger: GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCC...GCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp GGCGAAGCGCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTCCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCGT +
Preference number: 4 (lower is better)
Translates to: GEAPQGTSLLGKRLPPALPFPES*PGPFNR
Trigger: ACGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGG...AAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000586636.5
ENST00000591376.5
CDS-3UTR TCA 90 bp GGGGCTCCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGTCGGGCAGGTCCCTaGCGCAAGCGGGAAGACAGC +
Preference number: 4 (lower is better)
Translates to: GAPGQLLPHPPGSYHTTLSRAGP*RKREDS
Trigger: GCTGTCTTCCCGCTTGCGTCAGGGACCTGCCCGACT...GAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp CTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCCATGGCGGCCACTaGGTCGGGCAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: LCRTRPSSGHCSHHSDSGCHGGH*VGQVPD
Trigger: GTCAGGGACCTGCCCGACTCAGTGGCCGCCATGGCA...GCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000591376.5
ENST00000593048.5
CDS-3UTR TCA 90 bp ATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: IVVGKDWPPRKLPAHRSPTGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...CGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
CDS-3UTR TCA 90 bp GGGGCTCCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCGAGAGGGCACCAAGGTaGACCGAGCTCCCACCGCAG +
Preference number: 4 (lower is better)
Translates to: GAPGQLLPHPPGSYHTTLERAPR*TELPPQ
Trigger: CTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTCTC...GAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp CTTCACCCCAGAGGCCAGACCAGGGCGCGGCCTGCGGCCGGGGAGCAACCACCCTCTGGGCAAGCACAGTaGCAAGGTCTGAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: LHPRGQTRARPAAGEQPPSGQAQ*QGLSVQ
Trigger: CTGGACACTCAGACCTTGTCACTGTGCTTGCCCAGA...GGGTGGTTGCTCCCCGGCCGCAGGCCGCGCCCTGGTCTGGCCTCTGGGGTGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp CTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGACACATGCACCTAGCTaGCTGCCCAGCGGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: LQERLEALSPHLTGEAPQTHAPS*LPSGPS
Trigger: CGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGT...CTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR TCA 90 bp CAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCTCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: QGSTSLWARTGRPVSCRRSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...GCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR GCA 90 bp GTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGA +
Preference number: 4 (lower is better)
Translates to: VGKDWPPRKLPAHRSPCSGCLTT*LPGLLG
Trigger: TCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACC...GGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
CDS-3UTR GCA 90 bp TTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTTCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: LWARTGRPVSCRRTAARASWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...AGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR GCA 90 bp CGCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGCGCACCGCAGCCCGTaGTCCAGGAGAGACTCGAGG +
Preference number: 4 (lower is better)
Translates to: RLRGQASWASGCLQLLFQAHRSP*SRRDSR
Trigger: CCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGC...CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR GCA 90 bp CCAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAGCAGGAGCGCACCGCAGCCCGTaGTCCAGGAGAGACTCGAGG +
Preference number: 4 (lower is better)
Translates to: PTHTERRPPWGHRCGRAGAHRSP*SRRDSR
Trigger: CCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGC...TCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR GCA 90 bp ACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGGCCCCAGGGAAGGCTTaGAGACCCGCTGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TAARAPGETRGPEPAPHWAPGKA*RPAASP
Trigger: TGGAGAAGCAGCGGGTCTGCAAGCCTTCCCTGGGGC...CCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp CACCAAGGTGAACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGACTGTCCCTGCTAAGCTaGCCGCACAGTCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: HQGEPSSHRRPQQRGALGLSLLS*PHSPAL
Trigger: GAGGGCTGGACTGTGCGGGCAGCTTAGCAGGGACAG...TCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTTGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp CTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCCGGGAGGCGCTGCCCTaGACCCAACACACACCGAAA +
Preference number: 4 (lower is better)
Translates to: LHIVVGKDWPPRKLPAHRREALP*TQHTPK
Trigger: TTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCG...GCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp GGCGGGGGACCCGGCGCTCCCGGGAGGCGCTGCCCTGCACCCAACACACACCGACCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: GGGPGAPGRRCPAPNTHRPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...TCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGCGCCGGGTCCCCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp GCTGCCCTGCACCCAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: AALHPTHTERRPPWGHRCRGQAS*ASGCLQ
Trigger: CTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT...GCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp CTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTCCTGGGCAAGAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LSPHLTGEAPQGTSLLGKRGQAS*ASGCLQ
Trigger: CTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT...CTTGCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp TGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCGAGCCCGCACCTCACTaGCGAAGCGCCTCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: CRTRPSSGHCSHHSDSGCEPAPH*RSASGD
Trigger: GTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTC...GCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000591376.5
CDS-3UTR CCA 90 bp GCGAAGCGCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGGGCTCCACATCGTTGTaGGCAAGGACTGGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: AKRLRGQASWASGCLQLLGSTSL*ARTGRP
Trigger: GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCC...CAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp AACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTGACTTAACCCGGGACGGAAGCTaGCCATCCCGCAACCACCCC +
Preference number: 4 (lower is better)
Translates to: NRAPTAGHSSVAPSECDLTRDGS*PSRNHP
Trigger: GGGGTGGTTGCGGGATGGCCAGCTTCCGTCCCGGGT...TAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591097.5
CDS-3UTR CCA 90 bp AGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGCTTCATCTGATGCCATaGCGGCTACGAGCGGGTTCC +
Preference number: 4 (lower is better)
Translates to: RTGRPVSCRRTAARAPGELHLMP*RLRAGS
Trigger: GGAACCCGCTCGTAGCCGCCATGGCATCAGATGAAG...CTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585913.5
3UTR CAA 72 bp CGTCACAGGCCAGCATGCCCAGGGCGGGTCTGCACCTaGGCGCAGCTGGAGCCAGCTACCCGTATGGGATGG +
Preference number: 4 (lower is better)
Translates to: RHRPACPGRVCT*AQLEPATRMGW
Trigger: CCATCCCATACGGGTAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCATGCTGGCCTGTGACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp GCTCCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGATGCCATGGCGGCCACTaGGTCGGGCAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: APGQLLPHPPGSYHTTLRCHGGH*VGQVPD
Trigger: GTCAGGGACCTGCCCGACTCAGTGGCCGCCATGGCA...TCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp GGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGGATCTGTCCGTACTTTaGGAAGACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: GKDWPPRKLPAHRSPCSRDLSVL*EDLLQR
Trigger: TCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATC...CCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR TCA 90 bp GGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: GSTSLWARTGRPVSCRRTTGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...GGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
CDS-3UTR TCA 90 bp CCTCCTCCTCTAGAGAACCCACGGCCCCGTCCTCGGCCCCCACGGAAGAAGCCCACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: PPPLENPRPRPRPPRKKPTGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...GGGCTTCTTCCGTGGGGGCCGAGGACGGGGCCGTGGGTTCTCTAGAGGAGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
CDS-3UTR TCA 90 bp AGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGGGCGCCCTCGGAGTGTaGCTTACCGTAACTGTCATA +
Preference number: 4 (lower is better)
Translates to: RTGRPVSCRRTAARAPGEGALGV*LTVTVI
Trigger: TATGACAGTTACGGTAAGTCACACTCCGAGGGCGCC...CTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp GTCCCTGCTAAGCTGCCCGCACAGTCCAGCCCTCTGGCCACCACTGCCAGAAGCGAGAGGGCACCAAGGTaGACCGAGCTCCCACCGCAG +
Preference number: 4 (lower is better)
Translates to: VPAKLPAQSSPLATTARSERAPR*TELPPQ
Trigger: CTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTCTC...GCTTCTGGCAGTGGTGGCCAGAGGGCTGGACTGTGCGGGCAGCTTAGCAGGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp GAAGCGCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTAACCGGCTGGCCGTCTaGGGTCGCCCTGGGATGCCA +
Preference number: 4 (lower is better)
Translates to: EAPQGTSLLGKRLPPALVNRLAV*GRPGMP
Trigger: TGGCATCCCAGGGCGACCTCAGACGGCCAGCCGGTT...AACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGCGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000444172.6
ENST00000587169.5
ENST00000590347.5
CDS-3UTR TCA 90 bp GCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACGGCTATTTCCACATATaGGCTAGCCAAGGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: AGAPQPVLQERLEALSPHGYFHI*ASQGSS
Trigger: GCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGCC...GTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
ENST00000592234.5
CDS-3UTR TCA 90 bp AGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 4 (lower is better)
Translates to: RTGRPVSCRRTAARAPGESSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...CTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR TCA 90 bp GCTCTCAGGCCACCCTTCCCCGAGTCCTGGCCGGGCCCCTTCAACCTCGAATTAAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 4 (lower is better)
Translates to: ALRPPFPESWPGPFNLELRDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...TAATTCGAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGGTGGCCTGAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000592234.5
CDS-3UTR TCA 90 bp TCAGGCCACCCTTCCCCGAGTCCTGGCCGGGCCCCTTCAACCTCGAATTACAGGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 4 (lower is better)
Translates to: SGHPSPSPGRAPSTSNYRRDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...CCTGTAATTCGAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGGTGGCCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000592234.5
CDS-3UTR TCA 90 bp GCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACAAGTTTGCCTTCATCTaGTGCCATGGCGGCTACGAG +
Preference number: 4 (lower is better)
Translates to: AGAPQPVLQERLEALSPHKFAFI*CHGGYE
Trigger: CTCGTAGCCGCCATGGCATCAGATGAAGGCAAACTT...GTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585913.5
CDS-3UTR GCA 90 bp CCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGGGCTCCAGGGCAGTTaGTGCCACACCCGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: PGQLLPHPPGSYHTTLRNGLQGS*CHTRRG
Trigger: ACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCC...GTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp CGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGGGCTCCAGGGCAGTTaGTGCCACACCCGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: RIRLSQGSTSLWARTGRPGLQGS*CHTRRG
Trigger: ACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCC...GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp CCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGATGCCACGTGCCTCTaGTCTCTGGCCTGCTTCGTA +
Preference number: 4 (lower is better)
Translates to: PVSCRRTAARAPGETRGPDATCL*SLACFV
Trigger: TACGAAGCAGGCCAGAGAGCAGAGGCACGTGGCATC...AGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444172.6
ENST00000585914.5
CDS-3UTR GCA 90 bp CAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGAGGTCGCCCTGGGATaGCACGTGCCTCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: QPVLQERLEALSPHLTGEEVALG*HVPLLS
Trigger: AGAGAGCAGAGGCACGTGGCATCCCAGGGCGACCTC...TTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp ACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCAGGTCAGCGTCAGGTaGACGTCCACTGTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: TSLWARTGRPVSCRRTAAQVSVR*TSTVPA
Trigger: AGCAGGGACAGTGGACGTGCACCTGACGCTGACCTG...GGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp GGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGGGCTCAGCGCCACATaGCACTCTTCCCGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: GSTSLWARTGRPVSCRRTGLSAT*HSSRKH
Trigger: GTGCTTTCGGGAAGAGTGGCATGTGGCGCTGAGCCC...GGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR GCA 90 bp GACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGACGCAGGGGCTGGGGCCATGGCGGCCTCCTaGACCCTGATACTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: DVCTSTVGRTAQMDAGAGAMAAS*TLILLP
Trigger: CGGGAGGAGTATCAGGGTGCAGGAGGCCGCCATGGC...CCCAGCCCCTGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586472.5
CDS-3UTR GCA 90 bp TCCCGCTTCTGCGAATGTCCTGAGCAGTCTCCTCTCCTCTTGGCCTGGGTCCCCCCGCAACCACCCCTGTaGTTGGGCCGGCCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: SRFCECPEQSPLLLAWVPPQPPL*LGRPPP
Trigger: AGGGGGAGGCCGGCCCAAGCACAGGGGTGGTTGCGG...GGGGACCCAGGCCAAGAGGAGAGGAGACTGCTCAGGACATTCGCAGAAGCGGGA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000591097.5
CDS-3UTR CCA 90 bp ATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGCTTCATCTGATGCCATaGCGGCCACTGAGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: IVVGKDWPPRKLPAHRSPLHLMP*RPLSRA
Trigger: TGCCCGACTCAGTGGCCGCCATGGCATCAGATGAAG...CGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR CCA 90 bp CGCCATGGGGCCATAGGTGCGGGAGAGCAGGACTCACTGAAACGCCCAGGTGCCCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: RHGAIGAGEQDSLKRPGARSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...GGCACCTGGGCGTTTCAGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp GGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGATGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: GRPVSCRRTAARAPGETRCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...TCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp CGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: RRTAARAPGETRGPEPAPCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...AGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp ACCGAAGCAACAAGAGGCAGCTTCACCCCAGAGGCCAGACCAGGGCGCGGCCTGACAGCCGAGGGAGGCTaGCCTGCGGCCACACATGCA +
Preference number: 4 (lower is better)
Translates to: TEATRGSFTPEARPGRGLTAEGG*PAATHA
Trigger: TGCATGTGTGGCCGCAGGCCAGCCTCCCTCGGCTGT...CAGGCCGCGCCCTGGTCTGGCCTCTGGGGTGAAGCTGCCTCTTGTTGCTTCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CCA 90 bp GCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGGGCTCCACATCGTTGTaGGCAAGGACTGGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: ASGDKPPGQAAASSSCSRGSTSL*ARTGRP
Trigger: GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCC...CCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp AGCATGCCCAGGGCGGGTCTGCACCTTGGCGCAGCTGGAGCCAGCTACCCGTATGGCGGGTCTGCACCTTaGCGCAGCTGGAGCCAGCTA +
Preference number: 4 (lower is better)
Translates to: SMPRAGLHLGAAGASYPYGGSAP*RSWSQL
Trigger: TAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCC...ATACGGGTAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCATGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp CCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACTGCCATGGCGGCCACTaGGTCGGGCAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: PGQLLPHPPGSYHTTLRNCHGGH*VGQVPD
Trigger: GTCAGGGACCTGCCCGACTCAGTGGCCGCCATGGCA...GTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp CCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCGATCTGTCCGTACTTTaGGAAGACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: PRKLPAHRSPCSRRDSRPDLSVL*EDLLQR
Trigger: TCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATC...GGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR TCA 90 bp GCGCTGCCCTGCACCCAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: ALPCTQHTPKGARHGAIGTGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...ACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR TCA 90 bp CCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTGACTTACCGTAACTGTACACATGCACCTAGCTaGCTGCCCAGCGGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: PPQATAAWRPRSVTYRNCTHAPS*LPSGPS
Trigger: CGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGT...ACAGTTACGGTAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp TGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGCTATTTCCACATATaGGCTAGCCAAGGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: WARTGRPVSCRRTAARAPGYFHI*ASQGSS
Trigger: GCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGCC...TGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
ENST00000592234.5
CDS-3UTR TCA 90 bp CTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCTTTCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: LQERLEALSPHLTGEAPLSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...AAGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585914.5
CDS-3UTR TCA 90 bp TCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGTCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: SQGSTSLWARTGRPVSCRSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...CCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR TCA 90 bp CAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 4 (lower is better)
Translates to: QASWASGCLQLLFQVKSLRDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR TCA 90 bp AGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 4 (lower is better)
Translates to: RGQASWASGCLQLLFQVKRDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...CTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR GCA 90 bp CGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGA +
Preference number: 4 (lower is better)
Translates to: RTAARAPGETRGPEPAPHGCLTT*LPGLLG
Trigger: TCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACC...GTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
CDS-3UTR GCA 90 bp AGCGCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCGAGGTCGCCCTGGGATaGCACGTGCCTCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SASGDKPPGQAAASSSCSEVALG*HVPLLS
Trigger: AGAGAGCAGAGGCACGTGGCATCCCAGGGCGACCTC...GGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000444172.6
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp TGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCATGGTCTACTCGGATCTaGCGTCCATCTACAGACTGG +
Preference number: 4 (lower is better)
Translates to: WARTGRPVSCRRTAARAPWSTRI*RPSTDW
Trigger: CCAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...TGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590347.5
CDS-3UTR GCA 90 bp CAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAGCAGGACCTGCTCAGGTCTGGCTaGAGGAGCCCGCAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: QHTPKGARHGAIGAGEQDLLRSG*RSPQQG
Trigger: TCCTTGCTGCGGGCTCCTGCAGCCAGACCTGAGCAG...GTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587896.6
CDS-3UTR GCA 90 bp CAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCGTCACAGGCCAGCATaGCCAGGGCGGGTCTGCACC +
Preference number: 4 (lower is better)
Translates to: QASWASGCLQLLFQVKSLRHRPA*PGRVCT
Trigger: GGTGCAGACCCGCCCTGGGCATGCTGGCCTGTGACG...GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp GCTCCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAGATGCCATGGCGGCCTaGCAGCCCAAGGTACCCTGC +
Preference number: 4 (lower is better)
Translates to: APGQLLPHPPGSYHTTLRDAMAA*QPKVPC
Trigger: GCAGGGTACCTTGGGCTGGCAGGCCGCCATGGCATC...TCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588030.5
CDS-3UTR GCA 90 bp CCTCCTCCTCTAGAGAACCCACGGCCCCGTCCTCGGCCCCCACGGAAGAAGCCCGGCCTCCCCCTCACCTaGTATAGTAGTCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PPPLENPRPRPRPPRKKPGLPLT*YSSLWS
Trigger: GCTCCAGAGACTACTATAGCAGGTGAGGGGGAGGCC...GGGCTTCTTCCGTGGGGGCCGAGGACGGGGCCGTGGGTTCTCTAGAGGAGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000591097.5
CDS-3UTR CCA 90 bp GGGCTGGGGCTCCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACTTCATCTGATGCCATaGCGGCCACTGAGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: GLGLQGSCCHTRRGPTTLLHLMP*RPLSRA
Trigger: TGCCCGACTCAGTGGCCGCCATGGCATCAGATGAAG...TAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp ACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCTTCATCTGATGCCATaGCGGCCACTGAGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: TAARAPGETRGPEPAPHWLHLMP*RPLSRA
Trigger: TGCCCGACTCAGTGGCCGCCATGGCATCAGATGAAG...CCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR CCA 90 bp CCTCCTCCTCTAGAGAACCCACGGCCCCGTCCTCGGCCCCCACGGAAGAAGCCCGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: PPPLENPRPRPRPPRKKPDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...GGGCTTCTTCCGTGGGGGCCGAGGACGGGGCCGTGGGTTCTCTAGAGGAGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
CDS-3UTR CCA 90 bp GTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: VSCRRTAARAPGETRGPEDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...CTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
CDS-3UTR CCA 90 bp AAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGACAGATGCGCCTCTTCTaGGCAAGCACAGTGACAAGG +
Preference number: 4 (lower is better)
Translates to: KDWPPRKLPAHRSPCSRRQMRLF*ASTVTR
Trigger: CCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTG...TCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp CGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCACCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCTC +
Preference number: 4 (lower is better)
Translates to: RLPPALVPGEVPPGTVTPPFPES*PGPFNL
Trigger: GAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGG...TGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000592234.5
CDS-3UTR CCA 90 bp AGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTCCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCTC +
Preference number: 4 (lower is better)
Translates to: SLLGKRLPPALVPGEVPPPFPES*PGPFNL
Trigger: GAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGG...AGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000592234.5
CDS-3UTR CCA 90 bp CCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTCATCGCTGCTCTCAGGGAGCCCGCACCTCACTaGCGAAGCGCCTCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: PGEVPPGTVTPEVIAALREPAPH*RSASGD
Trigger: GTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTC...CCTGAGAGCAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp CCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAGCAGGACTCACTGAAAGTTGTGGGCAAGGACTaGCCGCCCCGTAAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: PKGARHGAIGAGEQDSLKVVGKD*PPRKLP
Trigger: CGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAAC...TTTCAGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp GAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAGCAGGACTCACTGAAACGGGCTCCACATCGTTGTaGGCAAGGACTGGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: ERRPPWGHRCGRAGLTETGSTSL*ARTGRP
Trigger: GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCC...CGTTTCAGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp GAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCTTACAGGGGACAAGCCTGAGCCCGCACCTCACTaGCGAAGCGCCTCTTACAGG +
Preference number: 4 (lower is better)
Translates to: EALSPHLTGEAPLTGDKPEPAPH*RSASYR
Trigger: CCTGTAAGAGGCGCTTCGCCAGTGAGGTGCGGGCTC...AGGCTTGTCCCCTGTAAGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585914.5
3UTR CAA 72 bp CCCCCGGCAGAGCCACCACGGTACCCACGGGATCGGTaGTCTGACGACTTGCCTGCCTGGTCTACTCGGATC +
Preference number: 4 (lower is better)
Translates to: PPAEPPRYPRDR*SDDLPAWSTRI
Trigger: GATCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTACCGTGGTGGCTCTGCCGGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
CDS-3UTR TCA 90 bp AATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTTGCCATGGCGGCCACTaGGTCGGGCAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: NPTFTGLHIVVGKDWPPRCHGGH*VGQVPD
Trigger: GTCAGGGACCTGCCCGACTCAGTGGCCGCCATGGCA...ACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR TCA 90 bp ACTGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTTGCCATGGCGGCCACTaGGTCGGGCAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: TVSVGPARAPVTVATTLTCHGGH*VGQVPD
Trigger: GTCAGGGACCTGCCCGACTCAGTGGCCGCCATGGCA...AGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000591376.5
ENST00000593048.5
CDS-3UTR TCA 90 bp GACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGACGCAGGGGCTGGGACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: DVCTSTVGRTAQMDAGAGTGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...CCCAGCCCCTGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320936.9
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
CDS-3UTR TCA 90 bp AGCTTCACCCCAGAGGCCAGACCAGGGCGCGGCCTGCGGCCGGGGAGCAACCACCGGTCAGGCTGGGTTTaGCAAGATCAGAACCGAAAT +
Preference number: 4 (lower is better)
Translates to: SFTPEARPGRGLRPGSNHRSGWV*QDQNRN
Trigger: ATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCG...GTGGTTGCTCCCCGGCCGCAGGCCGCGCCCTGGTCTGGCCTCTGGGGTGAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp CTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGAACCGGCTGGCCGTCTaGGGTCGCCCTGGGATGCCA +
Preference number: 4 (lower is better)
Translates to: LPPALVPGEVPPGTVTPENRLAV*GRPGMP
Trigger: TGGCATCCCAGGGCGACCTCAGACGGCCAGCCGGTT...CTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp CAGCGCCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 4 (lower is better)
Translates to: QRHMPLFPKALTGDKPPGRDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...CCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR TCA 90 bp CCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTCTCCCCGCTTCCACTaGGTCGGGCAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: PKALTGDKPPGQAAASSSSPRFH*VGQVPD
Trigger: GTCAGGGACCTGCCCGACTCAGTGGAAGCGGGGAGA...AGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586773.5
CDS-3UTR TCA 90 bp GCCACCACTCTGACTCCGGCTGCTATAGTAGTCTCTGGAGCCTCCGTAGCCCCCTCTCCCCGCTTCCACTaGGTCGGGCAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: ATTLTPAAIVVSGASVAPSPRFH*VGQVPD
Trigger: GTCAGGGACCTGCCCGACTCAGTGGAAGCGGGGAGA...GGGGGCTACGGAGGCTCCAGAGACTACTATAGCAGCCGGAGTCAGAGTGGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592412.5
CDS-3UTR GCA 90 bp GGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAACCTGCTCCAGCGACTaGTCATTGGTGTCAAAACTC +
Preference number: 4 (lower is better)
Translates to: GRPVSCRRTAARAPGETRTCSSD*SLVSKL
Trigger: GAGTTTTGACACCAATGAGCAGTCGCTGGAGCAGGT...TCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR GCA 90 bp CCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCACCTGCTCCAGCGACTaGTCATTGGTGTCAAAACTC +
Preference number: 4 (lower is better)
Translates to: PRKLPAHRSPCSRRDSRPTCSSD*SLVSKL
Trigger: GAGTTTTGACACCAATGAGCAGTCGCTGGAGCAGGT...GGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR GCA 90 bp GGGCTGGGGCTCCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTAGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGA +
Preference number: 4 (lower is better)
Translates to: GLGLQGSCCHTRRGPTTLGCLTT*LPGLLG
Trigger: TCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACC...TAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320936.9
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
CDS-3UTR GCA 90 bp TTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGCTCCAGGGCAGTTGCTaGCACACCCGCCGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LLPHPPGSYHTTLRNVTRLQGSC*HTRRGP
Trigger: AGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAG...CCGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp AGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGGCTCCAGGGCAGTTaGTGCCACACCCGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: SCCHTRRGPTTLHSETSHGLQGS*CHTRRG
Trigger: ACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCC...GTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp GCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: ASGDKPPGQAAASSSCSRSWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...CCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR GCA 90 bp CTGCACCCAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGATCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: LHPTHTERRPPWGHRCGRSWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...TCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR GCA 90 bp GACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGACGCAGGGGCTGGGTCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: DVCTSTVGRTAQMDAGAGSWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...CCCAGCCCCTGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp GGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGGAGTGTGTGGTGCAATaGAAGGGAATTGTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: GKDWPPRKLPAHRSPCSRECVVQ*KGIVRA
Trigger: TGCTCTGACAATTCCCTTGCATTGCACCACACACTC...CCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp CATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCCAGGGCGGGTCTaGACCTTGGCGCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: HATLPESTYRGQASWASGCPGRV*TLAQLE
Trigger: CTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCA...GCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587896.6
CDS-3UTR GCA 90 bp CAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAGCAGGACGGGCTCAGCGCCACATaGCACTCTTCCCGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: QHTPKGARHGAIGAGEQDGLSAT*HSSRKH
Trigger: GTGCTTTCGGGAAGAGTGGCATGTGGCGCTGAGCCC...GTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR GCA 90 bp CGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAACTGAAACGCCCAGGTaGCGCCCGGGACAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: RLPPALVPGEVPPGTVTPTETPR*RPGQGS
Trigger: TGAGCCCTGTCCCGGGCGGCACCTGGGCGTTTCAGT...TGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR GCA 90 bp CGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCACTGAAACGCCCAGGTaGCGCCCGGGACAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: RIRLSQGSTSLWARTGRPTETPR*RPGQGS
Trigger: TGAGCCCTGTCCCGGGCGGCACCTGGGCGTTTCAGT...GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR GCA 90 bp TTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGGCTCCCGGGAGGCGCTaGCCTGCACCCAACACACAC +
Preference number: 4 (lower is better)
Translates to: LLPHPPGSYHTTLRNVTRAPGRR*PAPNTH
Trigger: GTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGC...CCGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587896.6
CDS-3UTR CCA 90 bp CCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTCATCGCTGCTCTCAGGCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: PGEVPPGTVTPEVIAALRRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...CCTGAGAGCAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
ENST00000592234.5
CDS-3UTR CCA 90 bp CAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: QASWASGCLQLLFQVKSLRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
ENST00000592234.5
CDS-3UTR CCA 90 bp CGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACCTCAGAGGGTTCTGTTaGGCGCACAACACTTCTGTC +
Preference number: 4 (lower is better)
Translates to: RTAARAPGETRGPEPAPHLRGFC*AHNTSV
Trigger: GACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAG...GTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
ENST00000592234.5
CDS-3UTR CCA 90 bp CTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LTGDKPPGQAAASSSCSRRGQAS*ASGCLQ
Trigger: CTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT...CCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000585914.5
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
CDS-3UTR CCA 90 bp GGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GQASWASGCLQLLFQVKSRGQAS*ASGCLQ
Trigger: CTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT...GGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
ENST00000592234.5
CDS-3UTR CCA 90 bp TCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGAGTTGTGGGCAAGGACTaGCCGCCCCGTAAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SWASGCLQLLFQVKSLLGVVGKD*PPRKLP
Trigger: CGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAAC...TCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp TCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTGTTGTGGGCAAGGACTaGCCGCCCCGTAAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SRKHLQGTSLLGKRLPPAVVGKD*PPRKLP
Trigger: CGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAAC...AGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp CGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGTTGTGGGCAAGGACTaGCCGCCCCGTAAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: RLPPALVPGEVPPGTVTPVVGKD*PPRKLP
Trigger: CGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAAC...TGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp CAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCGTTGTGGGCAAGGACTaGCCGCCCCGTAAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: QASWASGCLQLLFQVKSLVVGKD*PPRKLP
Trigger: CGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAAC...GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp TCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCTG +
Preference number: 4 (lower is better)
Translates to: SNPTFTGLHIVVGKDWPPPFPES*PGPFNL
Trigger: CAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGG...GGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp CCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCGAAAGGCGCCCGCCATaGGGCCATAGGTGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: PLFPKALTGDKPPGQAAAERRPP*GHRCGR
Trigger: TCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTC...GGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp AGCCACCACTCTGACTCCGGCTGCTATAGTAGTCTCTGGAGCCTCCGTAGCCCCCCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCGT +
Preference number: 4 (lower is better)
Translates to: SHHSDSGCYSSLWSLRSPPFPES*PGPFNR
Trigger: ACGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGG...GGGGCTACGGAGGCTCCAGAGACTACTATAGCAGCCGGAGTCAGAGTGGTGGCT
64% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000591376.5
CDS-3UTR CCA 90 bp TGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCGT +
Preference number: 4 (lower is better)
Translates to: CHSSRKHLQGTSLLGKRLPFPES*PGPFNR
Trigger: ACGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGG...CAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000589235.5
ENST00000591935.5
CDS-3UTR TCA 90 bp CTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTCGATCTGTCCGTACTTTaGGAAGACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: LEALSPHLTGEAPQGTSLDLSVL*EDLLQR
Trigger: TCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATC...GAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR TCA 90 bp CCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAGCAGGACTCACTGAAAACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: PKGARHGAIGAGEQDSLKTGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...TTTCAGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR TCA 90 bp CTAGCTGACTGCCCAGCGGGCCCTCGCTCTCCCTTGCCTTTTTGGTCAGTCTCAGAGAGGGCACCAAGGTaGACCGAGCTCCCACCGCAG +
Preference number: 4 (lower is better)
Translates to: LADCPAGPRSPLPFWSVSERAPR*TELPPQ
Trigger: CTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTCTC...TGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGCCCGCTGGGCAGTCAGCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp CACCAAGGTGAACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGACACAGTGACAAGGTCTaGGTGTCCAGCCTAAAGTGC +
Preference number: 4 (lower is better)
Translates to: HQGEPSSHRRPQQRGALGHSDKV*VSSLKC
Trigger: GCACTTTAGGCTGGACACTCAGACCTTGTCACTGTG...TCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp GGCACCGAAGCAACAAGAGGCAGCTTCACCCCAGAGGCCAGACCAGGGCGCGGCTCTGGGCAAGCACAGTaGCAAGGTCTGAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: GTEATRGSFTPEARPGRGSGQAQ*QGLSVQ
Trigger: CTGGACACTCAGACCTTGTCACTGTGCTTGCCCAGA...GCCGCGCCCTGGTCTGGCCTCTGGGGTGAAGCTGCCTCTTGTTGCTTCGGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp ATAACTGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGAACCGGCTGGCCGTCTaGGGTCGCCCTGGGATGCCA +
Preference number: 4 (lower is better)
Translates to: ITVSVGPARAPVTVATTLNRLAV*GRPGMP
Trigger: TGGCATCCCAGGGCGACCTCAGACGGCCAGCCGGTT...CAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACAGTTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR TCA 90 bp GCCACCACTCTGACTCCGGCTGCTATAGTAGTCTCTGGAGCCTCCGTAGCCCCCTCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: ATTLTPAAIVVSGASVAPSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...GGGGGCTACGGAGGCTCCAGAGACTACTATAGCAGCCGGAGTCAGAGTGGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000591376.5
CDS-3UTR TCA 90 bp TCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGATCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: SWASGCLQLLFQVKSLLGSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...TCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
ENST00000592234.5
CDS-3UTR TCA 90 bp CACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 4 (lower is better)
Translates to: HLTGEAPQGTSLLGKRLPSSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...AGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR TCA 90 bp TCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 4 (lower is better)
Translates to: STSLWARTGRPVSCRRTASSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...TGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR TCA 90 bp GCTCCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAGGCCTGCTTCTAGACTaGGGCAGTCCAGGTCAGCGT +
Preference number: 4 (lower is better)
Translates to: APGQLLPHPPGSYHTTLRGLLLD*GSPGQR
Trigger: ACGCTGACCTGGACTGCCTCAGTCTAGAAGCAGGCC...TCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp CAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCTCTATGAGCCAGGCATaGCTGGGCCCAGGCTGCACC +
Preference number: 4 (lower is better)
Translates to: QASWASGCLQLLFQVKSLSMSQA*LGPGCT
Trigger: GGTGCAGCCTGGGCCCAGTCATGCCTGGCTCATAGA...GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp CAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCAAGGGATTTCATCTATaGGCCAGGCATGACTGGGCC +
Preference number: 4 (lower is better)
Translates to: QGSTSLWARTGRPVSCRRKGFHL*ARHDWA
Trigger: GGCCCAGTCATGCCTGGCTCATAGATGAAATCCCTT...GCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp TCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGAGAGCAGGACTCACTaGAACGCCCAGGTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: SSRKHLQGTSLLGKRLPPESRTH*NAQVPP
Trigger: GGGCGGCACCTGGGCGTTTCAGTGAGTCCTGCTCTC...TGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR TCA 90 bp GGGGCTCCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAAGTTTGCCTTCATCTaGTGCCATGGCGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: GAPGQLLPHPPGSYHTTLKFAFI*CHGGLW
Trigger: CCACAGGCCGCCATGGCATCAGATGAAGGCAAACTT...GAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589710.5
CDS-3UTR TCA 90 bp AGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGGTCTGCGAGCACCCGTaGCTCCCAGGTATCTCACCG +
Preference number: 4 (lower is better)
Translates to: RGQASWASGCLQLLFQVKVCEHP*LPGISP
Trigger: CGGTGAGATACCTGGGAGTCACGGGTGCTCGCAGAC...CTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591935.5
CDS-3UTR GCA 90 bp GCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGATACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: ARTGRPVSCRRTAARAPGYFEKT*SSDCSL
Trigger: CAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTA...TCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR GCA 90 bp GGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCTACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: GAPQPVLQERLEALSPHLYFEKT*SSDCSL
Trigger: CAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTA...GAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR GCA 90 bp AGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCTACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: SCRRTAARAPGETRGPEPYFEKT*SSDCSL
Trigger: CAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTA...GGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR GCA 90 bp ATAACTGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGCTCCAGGGCAGTTGCTaGCACACCCGCCGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: ITVSVGPARAPVTVATTLLQGSC*HTRRGP
Trigger: AGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAG...CAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACAGTTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp CAGGCGGGGGACCCGGCGCTCCCGGGAGGCGCTGCCCTGCACCCAACACACACCGAATTCCTCAGCCACTaGAAATACAACATCGATGGA +
Preference number: 4 (lower is better)
Translates to: QAGDPALPGGAALHPTHTEFLSH*KYNIDG
Trigger: TCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTC...GGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGCGCCGGGTCCCCCGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587896.6
CDS-3UTR GCA 90 bp GGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGATGCACCTAGCTGACTaGCCAGCGGGCCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: GKRLPPALVPGEVPPGTVMHLAD*PAGPRS
Trigger: AGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCAT...CACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp CTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCTTGATGCCACGTGCCTCTaGTCTCTGGCCTGCTTCGTA +
Preference number: 4 (lower is better)
Translates to: LQERLEALSPHLTGEAPLDATCL*SLACFV
Trigger: TACGAAGCAGGCCAGAGAGCAGAGGCACGTGGCATC...AAGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585914.5
CDS-3UTR GCA 90 bp TTGCGTCTCAGAGGGTTCTGTTGGGCGCACAACACTTCTGTCCTCCGAGGGCTGGCGCACCGCAGCCCGTaGTCCAGGAGAGACTCGAGG +
Preference number: 4 (lower is better)
Translates to: LRLRGFCWAHNTSVLRGLAHRSP*SRRDSR
Trigger: CCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGC...CAGCCCTCGGAGGACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGACGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp AACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTGACTTAGGCTTGCAGACCCGCTaGTTCTCCACCTTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: NRAPTAGHSSVAPSECDLGLQTR*FSTFSL
Trigger: GAGAGAGAAGGTGGAGAAGCAGCGGGTCTGCAAGCC...TAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp TGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGCCCCAGGGAAGGCTTaGAGACCCGCTGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: CLCRTRPSSGHCSHHSDSAPGKA*RPAASP
Trigger: TGGAGAAGCAGCGGGTCTGCAAGCCTTCCCTGGGGC...GGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp TTGCGTCTCAGAGGGTTCTGTTGGGCGCACAACACTTCTGTCCTCCGAGGGCTGTGCCCAGGGCGGGTCTaGACCTTGGCGCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LRLRGFCWAHNTSVLRGLCPGRV*TLAQLE
Trigger: CTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCA...CAGCCCTCGGAGGACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGACGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp CTTGCGTCTCAGAGGGTTCTGTTGGGCGCACAACACTTCTGTCCTCCGAGGGCTCGTCACAGGCCAGCATaGCCAGGGCGGGTCTGCACC +
Preference number: 4 (lower is better)
Translates to: LASQRVLLGAQHFCPPRARHRPA*PGRVCT
Trigger: GGTGCAGACCCGCCCTGGGCATGCTGGCCTGTGACG...AGCCCTCGGAGGACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGACGCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp CTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGCCATGGGGCCATAGGTaGGGGAGAGCAGGACTCACT +
Preference number: 4 (lower is better)
Translates to: LLGKRLPPALVPGEVPPGPWGHR*GRAGLT
Trigger: AGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGG...CCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR GCA 90 bp GTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTCATCGCTGCTCTCTGCCATGGCGGCCTGTaGCTCTGGGGTCAGCTGCGT +
Preference number: 4 (lower is better)
Translates to: VPGEVPPGTVTPEVIAALCHGGL*LWGQLR
Trigger: ACGCAGCTGACCCCAGAGGCACAGGCCGCCATGGCA...GAGAGCAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591935.5
CDS-3UTR GCA 90 bp AACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTGACTTACGTCTACTTCTGCTCTaGCACAACAGGCTGAGCCGC +
Preference number: 4 (lower is better)
Translates to: NRAPTAGHSSVAPSECDLRLLLL*HNRLSR
Trigger: GCGGCTCAGCCTGTTGTGGCAGAGCAGAAGTAGACG...TAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591097.5
CDS-3UTR CCA 90 bp CAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCCCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: QGSTSLWARTGRPVSCRRPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...GCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR CCA 90 bp ACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAGCAGGACTCACTGGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: TPKGARHGAIGAGEQDSLDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...CAGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp TGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: CRTRPSSGHCSHHSDSGCDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...GCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591097.5
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR CCA 90 bp CGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCTATAGTAGTCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: RPSSGHCSHHSDSGCYSSRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...ACTACTATAGCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR CCA 90 bp AACTGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: NCLCRTRPSSGHCSHHSDRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...GTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACAGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR CCA 90 bp GAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTGACTTACCGTTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: ELPPQATAAWRPRSVTYRCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...ACGGTAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CCA 90 bp GACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGACGCAGGGGCTGGGTCTGCACGTCTACTGTaGGGCGCACAGCACAGATGG +
Preference number: 4 (lower is better)
Translates to: DVCTSTVGRTAQMDAGAGSARLL*GAQHRW
Trigger: CCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGA...CCCAGCCCCTGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp GGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACAGGCCACAGCAGCGTaGCGCCCTCGGAGTGTGACT +
Preference number: 4 (lower is better)
Translates to: GSCCHTRRGPTTLHSETSQATAA*RPRSVT
Trigger: AGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTG...TGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp TTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGCAGGCCACAGCAGCGTaGCGCCCTCGGAGTGTGACT +
Preference number: 4 (lower is better)
Translates to: LLPHPPGSYHTTLRNVTRQATAA*RPRSVT
Trigger: AGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTG...CCGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp GGCGAAGCGCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTCAGATGCGCCTCTTCTaGGCAAGCACAGTGACAAGG +
Preference number: 4 (lower is better)
Translates to: GEAPQGTSLLGKRLPPALQMRLF*ASTVTR
Trigger: CCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTG...AAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR CCA 90 bp CACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCTCAGAGGGTTCTGTTaGGCGCACAACACTTCTGTC +
Preference number: 4 (lower is better)
Translates to: HIVVGKDWPPRKLPAHRSLRGFC*AHNTSV
Trigger: GACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAG...GCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
ENST00000592234.5
CDS-3UTR CCA 90 bp AATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: NPTFTGLHIVVGKDWPPRRGQAS*ASGCLQ
Trigger: CTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT...ACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp CTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTTGTGGGCAAGGACTaGCCGCCCCGTAAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: LPPALVPGEVPPGTVTPEVVGKD*PPRKLP
Trigger: CGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAAC...CTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp GTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTCATCGCTGCTCTCGGCTCCACATCGTTGTaGGCAAGGACTGGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: VPGEVPPGTVTPEVIAALGSTSL*ARTGRP
Trigger: GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCC...GAGAGCAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp CCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTCACAGTCCAGCCCTCTaGCCACCACTGCCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: PKALTGDKPPGQAAASSSHSPAL*PPLPEA
Trigger: GGCTTCTGGCAGTGGTGGCCAGAGGGCTGGACTGTG...AGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587896.6
CDS-3UTR CCA 90 bp CTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTCCTGGGCAAGGCTACCCGTATGGGATaGAGCTATGTGGGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: LSPHLTGEAPQGTSLLGKATRMG*SYVGQC
Trigger: ACACTGGCCCACATAGCTCCATCCCATACGGGTAGC...CTTGCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR CCA 90 bp GCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACGAGCCCGCACCTCACTaGCGAAGCGCCTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: AVAATPAGVLPHYTQKRHEPAPH*RSASWK
Trigger: CTTCCAGGAGGCGCTTCGCCAGTGAGGTGCGGGCTC...GTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587896.6
CDS-3UTR CCA 90 bp CCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTCATCGGCGGCCTGTGCCTCTaGGGTCAGCTGCGTCTGCGA +
Preference number: 4 (lower is better)
Translates to: PALVPGEVPPGTVTPEVIGGLCL*GQLRLR
Trigger: TCGCAGACGCAGCTGACCCCAGAGGCACAGGCCGCC...GATGACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591935.5
CDS-3UTR CCA 90 bp ACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCGT +
Preference number: 4 (lower is better)
Translates to: TCHSSRKHLQGTSLLGKRPFPES*PGPFNR
Trigger: ACGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGG...CCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000589235.5
ENST00000591935.5
CDS-3UTR TCA 90 bp CTTGCGTCTCAGAGGGTTCTGTTGGGCGCACAACACTTCTGTCCTCCGAGGGCTAGTCGGGCAGGTCCCTaGCGCAAGCGGGAAGACAGC +
Preference number: 4 (lower is better)
Translates to: LASQRVLLGAQHFCPPRASRAGP*RKREDS
Trigger: GCTGTCTTCCCGCTTGCGTCAGGGACCTGCCCGACT...AGCCCTCGGAGGACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGACGCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp AGGGAGCAGCTTGCGTCTCAGAGGGTTCTGTTGGGCGCACAACACTTCTGTCCTTGCCATGGCGGCCACTaGGTCGGGCAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: REQLASQRVLLGAQHFCPCHGGH*VGQVPD
Trigger: GTCAGGGACCTGCCCGACTCAGTGGCCGCCATGGCA...AGGACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGACGCAAGCTGCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp CCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTCATCGCTGCTCTCAGGACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: PGEVPPGTVTPEVIAALRTGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...CCTGAGAGCAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
ENST00000591935.5
CDS-3UTR TCA 90 bp GGCGAAGCGCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTTCGATCTCAGAGAAGTaGGTGGGGCACCCACTTCAT +
Preference number: 4 (lower is better)
Translates to: GEAPQGTSLLGKRLPPALSISEK*VGHPLH
Trigger: ATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGA...AAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR TCA 90 bp GGTACCCACGGGATCGGTTGTCTGACGACTTGCCTGCCTGGTCTACTCGGATCTGAGAGGGCACCAAGGTaGACCGAGCTCCCACCGCAG +
Preference number: 4 (lower is better)
Translates to: GTHGIGCLTTCLPGLLGSERAPR*TELPPQ
Trigger: CTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTCTC...AGATCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
CDS-3UTR TCA 90 bp TGGCGAAGCGCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTCACAGTGACAAGGTCTaGGTGTCCAGCCTAAAGTGC +
Preference number: 4 (lower is better)
Translates to: WRSASGDKPPGQAAASSSHSDKV*VSSLKC
Trigger: GCACTTTAGGCTGGACACTCAGACCTTGTCACTGTG...AGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR TCA 90 bp CAGCGCCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGTCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: QRHMPLFPKALTGDKPPGSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...CCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
CDS-3UTR TCA 90 bp CTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCTTAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 4 (lower is better)
Translates to: LQERLEALSPHLTGEAPLSSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...AAGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585914.5
CDS-3UTR TCA 90 bp CTGCACCCAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 4 (lower is better)
Translates to: LHPTHTERRPPWGHRCGRSSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...TCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR TCA 90 bp AAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGCACATGACTTTCAGTaGGCTCTCAACAAGAGGGAT +
Preference number: 4 (lower is better)
Translates to: KDWPPRKLPAHRSPCSRRAHDFQ*ALNKRD
Trigger: ATCCCTCTTGTTGAGAGCTCACTGAAAGTCATGTGC...TCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp AGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTTCTATGAGCCAGGCATaGCTGGGCCCAGGCTGCACC +
Preference number: 4 (lower is better)
Translates to: RAVAATPAGVLPHYTQKRSMSQA*LGPGCT
Trigger: GGTGCAGCCTGGGCCCAGTCATGCCTGGCTCATAGA...ACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp CAGCGCCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCTAGTCAGGGGGCTGTaGCCTCAGGCTCCGTCACAG +
Preference number: 4 (lower is better)
Translates to: QRHMPLFPKALTGDKPPGLVRGL*PQAPSQ
Trigger: CTGTGACGGAGCCTGAGGTCACAGCCCCCTGACTAG...CCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGCGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587896.6
CDS-3UTR GCA 90 bp GCTCCCGGGAGGCGCTGCCCTGCACCCAACACACACCGAAAGGCGCCCGCCATGTACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: APGRRCPAPNTHRKAPAMYFEKT*SSDCSL
Trigger: CAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTA...CATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR GCA 90 bp GGCACCAAGGTGAACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGTACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: GTKVNRAPTAGHSSVAPSYFEKT*SSDCSL
Trigger: CAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTA...CGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTTGGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR GCA 90 bp GGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: GSCCHTRRGPTTLHSETSPLRDV*TSTVGR
Trigger: GCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG...TGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp GTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGCCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: VAATPAGVLPHYTQKRHTPLRDV*TSTVGR
Trigger: GCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG...CGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp CCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGAGTTGGCCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: PHPPGSYHTTLRNVTRSWPLRDV*TSTVGR
Trigger: GCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG...CCAACTCCGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp GGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCTCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: GQASWASGCLQLLFQVKSSWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...GGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
ENST00000592234.5
CDS-3UTR GCA 90 bp GCCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCCCTCTGGCCACCACTaGCAGAAGCCTCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ATCHSSRKHLQGTSLLGKPSGHH*QKPPRA
Trigger: AGCCCTGGGAGGCTTCTGGCAGTGGTGGCCAGAGGG...CTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587896.6
CDS-3UTR GCA 90 bp AGGGAGCAGCTTGCGTCTCAGAGGGTTCTGTTGGGCGCACAACACTTCTGTCCTCGTCACAGGCCAGCATaGCCAGGGCGGGTCTGCACC +
Preference number: 4 (lower is better)
Translates to: REQLASQRVLLGAQHFCPRHRPA*PGRVCT
Trigger: GGTGCAGACCCGCCCTGGGCATGCTGGCCTGTGACG...AGGACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGACGCAAGCTGCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp GAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGGGGCTCAGCGCCACATaGCACTCTTCCCGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: ESDFHRAPHRCGQGLAAPGLSAT*HSSRKH
Trigger: GTGCTTTCGGGAAGAGTGGCATGTGGCGCTGAGCCC...CGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR GCA 90 bp CGCCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAACTGAAACGCCCAGGTaGCGCCCGGGACAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: RHMPLFPKALTGDKPPGQTETPR*RPGQGS
Trigger: TGAGCCCTGTCCCGGGCGGCACCTGGGCGTTTCAGT...TTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR GCA 90 bp ACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGCGGGAGGCGCTGCCCTaGACCCAACACACACCGAAA +
Preference number: 4 (lower is better)
Translates to: TYRGQASWASGCLQLLFQREALP*TQHTPK
Trigger: TTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCG...CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR GCA 90 bp GAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTGACTTACCGTTCACAACCACCACTGTaGAGGGGAGAGAGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: ELPPQATAAWRPRSVTYRSQPPL*RGERSS
Trigger: TGAAGACCTCTCTCCCCTGCACAGTGGTGGTTGTGA...ACGGTAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
CDS-3UTR CCA 90 bp GCTGCCCTGCACCCAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCCCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: AALHPTHTERRPPWGHRCPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...GCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp GAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTGACTTACCGTCCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: ELPPQATAAWRPRSVTYRPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...ACGGTAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CCA 90 bp CTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAATCCCCGAGATCTCTaGGTCTCCCTGTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: LHIVVGKDWPPRKLPAHRNPRDL*VSLSFT
Trigger: TGTGAAAGACAGGGAGACCCAGAGATCTCGGGGATT...GCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
CDS-3UTR CCA 90 bp CTCAGGCCACCCTTCCCCGAGTCCTGGCCGGGCCCCTTCAACCTCGAATTACAGGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: LRPPFPESWPGPFNLELQDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...CTGTAATTCGAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGGTGGCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585914.5
CDS-3UTR CCA 90 bp GAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAGCAGGACTCACTGAAACGGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: ERRPPWGHRCGRAGLTETDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...CGTTTCAGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp CTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCTTTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: LQERLEALSPHLTGEAPLCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...AAGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585914.5
CDS-3UTR CCA 90 bp ACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAGCAGGACTCACTGTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: TPKGARHGAIGAGEQDSLCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...CAGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp CAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAGCAGGACTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: QHTPKGARHGAIGAGEQDCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...GTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp GACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGACGCAGGGGCTGGGCAGATGCGCCTCTTCTaGGCAAGCACAGTGACAAGG +
Preference number: 4 (lower is better)
Translates to: DVCTSTVGRTAQMDAGAGQMRLF*ASTVTR
Trigger: CCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTG...CCCAGCCCCTGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp GCTCAGCGCCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: AQRHMPLFPKALTGDKPPRGQAS*ASGCLQ
Trigger: CTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT...AGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGCGCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
CDS-3UTR CCA 90 bp CTTGCGTCTCAGAGGGTTCTGTTGGGCGCACAACACTTCTGTCCTCCGAGGGCTGTTGTGGGCAAGGACTaGCCGCCCCGTAAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: LASQRVLLGAQHFCPPRAVVGKD*PPRKLP
Trigger: CGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAAC...AGCCCTCGGAGGACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGACGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp AGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGTTGTGGGCAAGGACTaGCCGCCCCGTAAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SCCHTRRGPTTLHSETSHVVGKD*PPRKLP
Trigger: CGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAAC...GTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp CCAGCATGCCCAGGGCGGGTCTGCACCTTGGCGCAGCTGGAGCCAGCTACCCGTTCAACAAGAGGGATGTaGACACGAGCGGAAGGAGTT +
Preference number: 4 (lower is better)
Translates to: PACPGRVCTLAQLEPATRSTRGM*TRAEGV
Trigger: AACTCCTTCCGCTCGTGTCCACATCCCTCTTGTTGA...ACGGGTAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCATGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp CCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTCATCGAAAGGCGCCCGCCATaGGGCCATAGGTGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: PALVPGEVPPGTVTPEVIERRPP*GHRCGR
Trigger: TCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTC...GATGACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp CACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCTTCTGGGTGCACACGTaGCCCTTTATTCGAATCCGA +
Preference number: 4 (lower is better)
Translates to: HIVVGKDWPPRKLPAHRSFWVHT*PFIRIR
Trigger: TCGGATTCGAATAAAGGGCCACGTGTGCACCCAGAA...GCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp ACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGTTCTGGGTGCACACGTaGCCCTTTATTCGAATCCGA +
Preference number: 4 (lower is better)
Translates to: TAARAPGETRGPEPAPHWFWVHT*PFIRIR
Trigger: TCGGATTCGAATAAAGGGCCACGTGTGCACCCAGAA...CCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp CAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGTGGCTGGGGAGAGCTaGTGGTCGCGTCTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: QEPLRDVCTSTVGRTAQMVAGES*WSRLPH
Trigger: ATGGGGGAGACGCGACCACCAGCTCTCCCCAGCCAC...CATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588030.5
CDS-3UTR CCA 90 bp ATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACCCCGACTCCTGTGGCTaGGGAGAGCTGGTGGTCGCG +
Preference number: 4 (lower is better)
Translates to: IFKNLSGTSARLLWGAQHPDSCG*GELVVA
Trigger: CGCGACCACCAGCTCTCCCCAGCCACAGGAGTCGGG...GTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588030.5
CDS-3UTR CCA 90 bp CCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCCTTCATCTGATGCCATaGCGGCCTGTGCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: PLFPKALTGDKPPGQAAALHLMP*RPVPLG
Trigger: CCCCAGAGGCACAGGCCGCCATGGCATCAGATGAAG...GGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591935.5
CDS-3UTR TCA 90 bp AGAGGACAGATGCGCCTCTTCTGGGCAAGCACAGTGACAAGGTCTGAGTGTCCATGCCATGGCGGCCACTaGGTCGGGCAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: RGQMRLFWASTVTRSECPCHGGH*VGQVPD
Trigger: GTCAGGGACCTGCCCGACTCAGTGGCCGCCATGGCA...TGGACACTCAGACCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTGTCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp GGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCAACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: GSCCHTRRGPTTLHSETSTGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...TGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320936.9
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
CDS-3UTR TCA 90 bp CTAGCTGACTGCCCAGCGGGCCCTCGCTCTCCCTTGCCTTTTTGGTCAGTCTCAACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LADCPAGPRSPLPFWSVSTGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...TGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGCCCGCTGGGCAGTCAGCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000591097.5
CDS-3UTR TCA 90 bp CTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LPPALVPGEVPPGTVTPETGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...CTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
ENST00000591935.5
CDS-3UTR TCA 90 bp CGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCTATAGTAGTACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: RPSSGHCSHHSDSGCYSSTGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...ACTACTATAGCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR TCA 90 bp CCAGGGACCTGGGACCCGGGACGGAAGCTGGCCATCCCGCAACCACCCCTGTGCTTGGAAGGACGATCTTaGGCAGGAAGGGTTTTTACT +
Preference number: 4 (lower is better)
Translates to: PGTWDPGRKLAIPQPPLCLEGRS*AGRVFT
Trigger: AGTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAA...GCACAGGGGTGGTTGCGGGATGGCCAGCTTCCGTCCCGGGTCCCAGGTCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591097.5
CDS-3UTR TCA 90 bp TGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCAAGATCAGAACCGAAATaGCTACGAAAGTGGGAATAC +
Preference number: 4 (lower is better)
Translates to: CRRTAARAPGETRGPEPARSEPK*LRKWEY
Trigger: GTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCT...TGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp AGGTGCACGTCCACTGTCCCTGCTAAGCTGCCCGCACAGTCCAGCCCTCTGGCCTCGATCTCAGAGAAGTaGGTGGGGCACCCACTTCAT +
Preference number: 4 (lower is better)
Translates to: RCTSTVPAKLPAQSSPLASISEK*VGHPLH
Trigger: ATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGA...GGCCAGAGGGCTGGACTGTGCGGGCAGCTTAGCAGGGACAGTGGACGTGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp ACCGAAGCAACAAGAGGCAGCTTCACCCCAGAGGCCAGACCAGGGCGCGGCCTGCACAGTGACAAGGTCTaGGTGTCCAGCCTAAAGTGC +
Preference number: 4 (lower is better)
Translates to: TEATRGSFTPEARPGRGLHSDKV*VSSLKC
Trigger: GCACTTTAGGCTGGACACTCAGACCTTGTCACTGTG...CAGGCCGCGCCCTGGTCTGGCCTCTGGGGTGAAGCTGCCTCTTGTTGCTTCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp CGCAGCTGGAGCCAGCTACCCGTATGGGATGGAGCTATGTGGGCCAGTGTGGGCTCTGGGCAAGCACAGTaGCAAGGTCTGAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: RSWSQLPVWDGAMWASVGSGQAQ*QGLSVQ
Trigger: CTGGACACTCAGACCTTGTCACTGTGCTTGCCCAGA...GCCCACACTGGCCCACATAGCTCCATCCCATACGGGTAGCTGGCTCCAGCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp CTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCTTGGCTATTTCCACATATaGGCTAGCCAAGGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LQERLEALSPHLTGEAPLGYFHI*ASQGSS
Trigger: GCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGCC...AAGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585914.5
CDS-3UTR TCA 90 bp TTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCTCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: FESDFHRAPHRCGQGLAASLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...GGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR TCA 90 bp GTCATAACTGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTAGTCAGGGGGCTGTaGCCTCAGGCTCCGTCACAG +
Preference number: 4 (lower is better)
Translates to: VITVSVGPARAPVTVATTLVRGL*PQAPSQ
Trigger: CTGTGACGGAGCCTGAGGTCACAGCCCCCTGACTAG...AGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACAGTTATGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp ACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTTGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 4 (lower is better)
Translates to: TRGPEPAPHWRSASGDKPWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...AGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586636.5
ENST00000587169.5
ENST00000591376.5
CDS-3UTR GCA 90 bp TCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCATGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 4 (lower is better)
Translates to: STSLWARTGRPVSCRRTAWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...TGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
CDS-3UTR GCA 90 bp CTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGA +
Preference number: 4 (lower is better)
Translates to: LLGKRLPPALVPGEVPPGGCLTT*LPGLLG
Trigger: TCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACC...CCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
ENST00000591935.5
CDS-3UTR GCA 90 bp CGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCCTGTCCTCCGAGGGCTaGAGCTTCCATAGGCTAGCA +
Preference number: 4 (lower is better)
Translates to: RIRLSQGSTSLWARTGRPLSSEG*SFHRLA
Trigger: TGCTAGCCTATGGAAGCTGCAGCCCTCGGAGGACAG...GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000444172.6
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp CACCTAGCTGACTGCCCAGCGGGCCCTCGCTCTCCCTTGCCTTTTTGGTCAGTCCTGTCCTCCGAGGGCTaGAGCTTCCATAGGCTAGCA +
Preference number: 4 (lower is better)
Translates to: HLADCPAGPRSPLPFWSVLSSEG*SFHRLA
Trigger: TGCTAGCCTATGGAAGCTGCAGCCCTCGGAGGACAG...GACTGACCAAAAAGGCAAGGGAGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp TATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGGCGCACCGCAGCCCGTaGTCCAGGAGAGACTCGAGG +
Preference number: 4 (lower is better)
Translates to: YSNPTFTGLHIVVGKDWPAHRSP*SRRDSR
Trigger: CCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGC...CGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR GCA 90 bp CCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGGCTTGCAGACCCGCTaGTTCTCCACCTTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: PGQLLPHPPGSYHTTLRNGLQTR*FSTFSL
Trigger: GAGAGAGAAGGTGGAGAAGCAGCGGGTCTGCAAGCC...GTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp AGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGGGCTTGCAGACCCGCTaGTTCTCCACCTTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: RGQASWASGCLQLLFQVKGLQTR*FSTFSL
Trigger: GAGAGAGAAGGTGGAGAAGCAGCGGGTCTGCAAGCC...CTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp CTTGCGTCTCAGAGGGTTCTGTTGGGCGCACAACACTTCTGTCCTCCGAGGGCTGCCCCAGGGAAGGCTTaGAGACCCGCTGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LASQRVLLGAQHFCPPRAAPGKA*RPAASP
Trigger: TGGAGAAGCAGCGGGTCTGCAAGCCTTCCCTGGGGC...AGCCCTCGGAGGACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGACGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp AGTGTAAAGGCACCGAAGCAACAAGAGGCAGCTTCACCCCAGAGGCCAGACCAGCCCTCTGGCCACCACTaGCAGAAGCCTCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SVKAPKQQEAASPQRPDQPSGHH*QKPPRA
Trigger: AGCCCTGGGAGGCTTCTGGCAGTGGTGGCCAGAGGG...CTGGTCTGGCCTCTGGGGTGAAGCTGCCTCTTGTTGCTTCGGTGCCTTTACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp CTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTCATCGCTGCTCTGTCCCTGCTAAGCTaGCCGCACAGTCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LVPGEVPPGTVTPEVIAALSLLS*PHSPAL
Trigger: GAGGGCTGGACTGTGCGGGCAGCTTAGCAGGGACAG...AGCAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp CCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTCGGGCTCAGCGCCACATaGCACTCTTCCCGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: PPALVPGEVPPGTVTPEVGLSAT*HSSRKH
Trigger: GTGCTTTCGGGAAGAGTGGCATGTGGCGCTGAGCCC...GACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
CDS-3UTR GCA 90 bp GGGACAGGGCTCAGCGCCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACACCATGGGGCCATAGGTaGGGGAGAGCAGGACTCACT +
Preference number: 4 (lower is better)
Translates to: GTGLSATCHSSRKHLQGTPWGHR*GRAGLT
Trigger: AGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGG...TGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGCGCTGAGCCCTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR GCA 90 bp CTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCACTCGGCTTTCTGGGTaGACACGTGGCCCTTTATTC +
Preference number: 4 (lower is better)
Translates to: LCRTRPSSGHCSHHSDSGTRLSG*TRGPLF
Trigger: GAATAAAGGGCCACGTGTGCACCCAGAAAGCCGAGT...GCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591376.5
CDS-3UTR CCA 90 bp AACGAGGCCATCCCGGCGTCAGAAGCGGTCAGGCTGGGTTTGACAAGATCAGAACGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: NEAIPASEAVRLGLTRSERSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...TTCTGATCTTGTCAAACCCAGCCTGACCGCTTCTGACGCCGGGATGGCCTCGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
CDS-3UTR CCA 90 bp CCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAGCAGGACTCACTGAAATGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: PKGARHGAIGAGEQDSLKCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...TTTCAGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp GGACCCGGCGCTCCCGGGAGGCGCTGCCCTGCACCCAACACACACCGAAAGGCGCAAATACAACATCGATaGAGTATGCGTACGTCTTCC +
Preference number: 4 (lower is better)
Translates to: GPGAPGRRCPAPNTHRKAQIQHR*SMRTSS
Trigger: GGAAGACGTACGCATACTCCATCGATGTTGTATTTG...CGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGCGCCGGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587896.6
CDS-3UTR CCA 90 bp TCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCTATAGTAGTCTCTGGAGCCAGGCCACAGCAGCGTaGCGCCCTCGGAGTGTGACT +
Preference number: 4 (lower is better)
Translates to: SGHCSHHSDSGCYSSLWSQATAA*RPRSVT
Trigger: AGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTG...GCTCCAGAGACTACTATAGCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590171.1
CDS-3UTR CCA 90 bp TCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCTATAGTAGTCTCTGGAGCGGCTCCACATCGTTGTaGGCAAGGACTGGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: SGHCSHHSDSGCYSSLWSGSTSL*ARTGRP
Trigger: GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCC...GCTCCAGAGACTACTATAGCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000591376.5
CDS-3UTR CCA 90 bp GGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACGTCCATCTACAGACTaGAGACAGAGGGCGGGACGG +
Preference number: 4 (lower is better)
Translates to: GSCCHTRRGPTTLHSETSRPSTD*RQRAGR
Trigger: CCGTCCCGCCCTCTGTCTCCAGTCTGTAGATGGACG...TGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590347.5
CDS-3UTR CCA 90 bp TTGCGTCTCAGAGGGTTCTGTTGGGCGCACAACACTTCTGTCCTCCGAGGGCTGCACAGTCCAGCCCTCTaGCCACCACTGCCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LRLRGFCWAHNTSVLRGLHSPAL*PPLPEA
Trigger: GGCTTCTGGCAGTGGTGGCCAGAGGGCTGGACTGTG...CAGCCCTCGGAGGACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGACGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp TCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTTGGGATGGAGCTATGTaGGCCAGTGTGGGCTCTAGA +
Preference number: 4 (lower is better)
Translates to: SVGPARAPVTVATTLTPAWDGAM*ASVGSR
Trigger: TCTAGAGCCCACACTGGCCCACATAGCTCCATCCCA...AGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR CCA 90 bp GCCACCACTCTGACTCCGGCTGCTATAGTAGTCTCTGGAGCCTCCGTAGCCCCCCTTCATCTGATGCCATaGCGGCCTGTGGCAGACACC +
Preference number: 4 (lower is better)
Translates to: ATTLTPAAIVVSGASVAPLHLMP*RPVADT
Trigger: GGTGTCTGCCACAGGCCGCCATGGCATCAGATGAAG...GGGGGCTACGGAGGCTCCAGAGACTACTATAGCAGCCGGAGTCAGAGTGGTGGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000592412.5
CDS-3UTR CCA 90 bp TCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCATTCTGGGTGCACACGTaGCCCTTTATTCGAATCCGA +
Preference number: 4 (lower is better)
Translates to: STSLWARTGRPVSCRRTAFWVHT*PFIRIR
Trigger: TCGGATTCGAATAAAGGGCCACGTGTGCACCCAGAA...TGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp AGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTCATGGGGCCAACCCAGTCCCCGACTCCTGTaGCTGGGGAGAGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SPFDLREVSGAPTSWGQPSPRLL*LGRAGG
Trigger: ACCACCAGCTCTCCCCAGCCACAGGAGTCGGGGACT...GGGTTGGCCCCATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000588030.5
CDS-3UTR CCA 90 bp GAAATGGCTCTGAGAGGACAGATGCGCCTCTTCTGGGCAAGCACAGTGACAAGGAACCACCCCTGTGCTTaGGCCGGCCTCCCCCTCACC +
Preference number: 4 (lower is better)
Translates to: EMALRGQMRLFWASTVTRNHPCA*AGLPLT
Trigger: GGTGAGGGGGAGGCCGGCCCAAGCACAGGGGTGGTT...CCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTGTCCTCTCAGAGCCATTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR CAA 72 bp CCACCACGGTACCCACGGGATCGGTTGTCTGACGACTaGCCTGCCTGGTCTACTCGGATCTGCCGTCCATCT +
Preference number: 4 (lower is better)
Translates to: PPRYPRDRLSDD*PAWSTRICRPS
Trigger: AGATGGACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTACCGTGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
CDS-3UTR TCA 90 bp GTTGGGCGCACAACACTTCTGTCCTCCGAGGGCTGCAGCTTCCATAGGCTAGCAACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: VGRTTLLSSEGCSFHRLATGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...TGCTAGCCTATGGAAGCTGCAGCCCTCGGAGGACAGAAGTGTTGTGCGCCCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000587896.6
CDS-3UTR TCA 90 bp CACCAAGGTGAACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGATTGGAAGGACGATCTTaGGCAGGAAGGGTTTTTACT +
Preference number: 4 (lower is better)
Translates to: HQGEPSSHRRPQQRGALGLEGRS*AGRVFT
Trigger: AGTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAA...TCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp GACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGACGCAGGGGCTGGGCGGTCAGGCTGGGTTTaGCAAGATCAGAACCGAAAT +
Preference number: 4 (lower is better)
Translates to: DVCTSTVGRTAQMDAGAGRSGWV*QDQNRN
Trigger: ATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCG...CCCAGCCCCTGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp CCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGACGCAGGCGCCCTCGGAGTGTaGCTTACCGTAACTGTCATA +
Preference number: 4 (lower is better)
Translates to: PLRDVCTSTVGRTAQMDAGALGV*LTVTVI
Trigger: TATGACAGTTACGGTAAGTCACACTCCGAGGGCGCC...TGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp ACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCTATAGTGGCGCCCTCGGAGTGTaGCTTACCGTAACTGTCATA +
Preference number: 4 (lower is better)
Translates to: TRPSSGHCSHHSDSGCYSGALGV*LTVTVI
Trigger: TATGACAGTTACGGTAAGTCACACTCCGAGGGCGCC...ACTATAGCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590171.1
CDS-3UTR TCA 90 bp GGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGAAACCGGCTGGCCGTCTaGGGTCGCCCTGGGATGCCA +
Preference number: 4 (lower is better)
Translates to: GPLFESDFHRAPHRCGQGNRLAV*GRPGMP
Trigger: TGGCATCCCAGGGCGACCTCAGACGGCCAGCCGGTT...TCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000444172.6
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp AGTAACGAGGCCATCCCGGCGTCAGAAGCGGTCAGGCTGGGTTTGACAAGATCATCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: SNEAIPASEAVRLGLTRSSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...TGATCTTGTCAAACCCAGCCTGACCGCTTCTGACGCCGGGATGGCCTCGTTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp CGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 4 (lower is better)
Translates to: RLPPALVPGEVPPGTVTPSSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...TGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
ENST00000592234.5
CDS-3UTR TCA 90 bp CAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 4 (lower is better)
Translates to: QASWASGCLQLLFQVKSLSSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
ENST00000592234.5
CDS-3UTR TCA 90 bp GCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 4 (lower is better)
Translates to: AHVALYSNPTFTGLHIVVRDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...CACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR GCA 90 bp CTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCTTTGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 4 (lower is better)
Translates to: LQERLEALSPHLTGEAPLWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...AAGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585914.5
CDS-3UTR GCA 90 bp CTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 4 (lower is better)
Translates to: LCRTRPSSGHCSHHSDSGWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...GCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591097.5
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR GCA 90 bp TGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGA +
Preference number: 4 (lower is better)
Translates to: CLCRTRPSSGHCSHHSDSGCLTT*LPGLLG
Trigger: TCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACC...GGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591097.5
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR GCA 90 bp CCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTCATCGCTGCTCTCAGGGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGA +
Preference number: 4 (lower is better)
Translates to: PGEVPPGTVTPEVIAALRGCLTT*LPGLLG
Trigger: TCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACC...CCTGAGAGCAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
ENST00000591935.5
CDS-3UTR GCA 90 bp GGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGGAATACAAGGAGGTaGATTTACTACACATTAACG +
Preference number: 4 (lower is better)
Translates to: GRPVSCRRTAARAPGETRGNTRR*IYYTLT
Trigger: CGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC...TCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp AGTGTAAAGGCACCGAAGCAACAAGAGGCAGCTTCACCCCAGAGGCCAGACCAGCCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: SVKAPKQQEAASPQRPDQPLRDV*TSTVGR
Trigger: GCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG...CTGGTCTGGCCTCTGGGGTGAAGCTGCCTCTTGTTGCTTCGGTGCCTTTACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp TGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCAAAAGCCAAAGAAAACTaGGTACAAGAATTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: CRRTAARAPGETRGPEPAKAKEN*VQEFLS
Trigger: GCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTT...TGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp AAGGTGAACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTTTGGCTTTTGCGTCCTaGGATAGAAATGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: KVNRAPTAGHSSVAPSECLAFAS*DRNGSE
Trigger: CTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAA...ACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR GCA 90 bp CGTGCCTCTGCTCTCTGGCCTGCTTCTAGACTGAGGCAGTCCAGGTCAGCGTCACTGTCCTCCGAGGGCTaGAGCTTCCATAGGCTAGCA +
Preference number: 4 (lower is better)
Translates to: RASALWPASRLRQSRSASLSSEG*SFHRLA
Trigger: TGCTAGCCTATGGAAGCTGCAGCCCTCGGAGGACAG...TGACGCTGACCTGGACTGCCTCAGTCTAGAAGCAGGCCAGAGAGCAGAGGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp GTTGGGCGCACAACACTTCTGTCCTCCGAGGGCTGCAGCTTCCATAGGCTAGCATCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: VGRTTLLSSEGCSFHRLASWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...TGCTAGCCTATGGAAGCTGCAGCCCTCGGAGGACAGAAGTGTTGTGCGCCCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp GCTCAGCGCCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTTCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: AQRHMPLFPKALTGDKPPSWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...AGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGCGCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
CDS-3UTR GCA 90 bp CTGAGAGGACAGATGCGCCTCTTCTGGGCAAGCACAGTGACAAGGTCTGAGTGTCCCTCTGGCCACCACTaGCAGAAGCCTCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LRGQMRLFWASTVTRSECPSGHH*QKPPRA
Trigger: AGCCCTGGGAGGCTTCTGGCAGTGGTGGCCAGAGGG...ACACTCAGACCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTGTCCTCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp TTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGACTCGGCTTTCTGGGTaGACACGTGGCCCTTTATTC +
Preference number: 4 (lower is better)
Translates to: FTGLHIVVGKDWPPRKLPTRLSG*TRGPLF
Trigger: GAATAAAGGGCCACGTGTGCACCCAGAAAGCCGAGT...CGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586636.5
ENST00000591376.5
CDS-3UTR CCA 90 bp GGCCACCCTTCCCCGAGTCCTGGCCGGGCCCCTTCAACCTCGAATTACAGGGCTAATCCCCGAGATCTCTaGGTCTCCCTGTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: GHPSPSPGRAPSTSNYRANPRDL*VSLSFT
Trigger: TGTGAAAGACAGGGAGACCCAGAGATCTCGGGGATT...AGCCCTGTAATTCGAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585914.5
CDS-3UTR CCA 90 bp AATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: NPTFTGLHIVVGKDWPPRDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...ACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
CDS-3UTR CCA 90 bp GAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: ESDFHRAPHRCGQGLAAPCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...CGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp CCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: PLFPKALTGDKPPGQAAACYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...GGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
CDS-3UTR CCA 90 bp CTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACATGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: LGKRLPPALVPGEVPPGTCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...TGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
ENST00000592234.5
CDS-3UTR CCA 90 bp ACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTTCTGCACGTCTACTGTaGGGCGCACAGCACAGATGG +
Preference number: 4 (lower is better)
Translates to: TSLLGKRLPPALVPGEVPSARLL*GAQHRW
Trigger: CCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGA...AGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp GCTCTCTGGCCTGCTTCTAGACTGAGGCAGTCCAGGTCAGCGTCAGGTGCACGTTCTGCACGTCTACTGTaGGGCGCACAGCACAGATGG +
Preference number: 4 (lower is better)
Translates to: ALWPASRLRQSRSASGARSARLL*GAQHRW
Trigger: CCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGA...ACGTGCACCTGACGCTGACCTGGACTGCCTCAGTCTAGAAGCAGGCCAGAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp GAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTCACAGGCCACAGCAGCGTaGCGCCCTCGGAGTGTGACT +
Preference number: 4 (lower is better)
Translates to: ERIHSPFDLREVSGAPTSQATAA*RPRSVT
Trigger: AGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTG...TGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp CGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTTGGTCAGTCTCATTTaGCTTTTGCGTCCTGCGATA +
Preference number: 4 (lower is better)
Translates to: RAPGETRGPEPAPHWRSALVSLI*LLRPAI
Trigger: TATCGCAGGACGCAAAAGCCAAATGAGACTGACCAA...GGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp GAGGGCACCAAGGTGAACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCTCCCTTGCCTTTTTaGTCAGTCTCATTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: EGTKVNRAPTAGHSSVAPSPLPF*SVSFGF
Trigger: AAAGCCAAATGAGACTGACCAAAAAGGCAAGGGAGA...GGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CCA 90 bp CTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGCTCAGAGGGTTCTGTTaGGCGCACAACACTTCTGTC +
Preference number: 4 (lower is better)
Translates to: LRGQASWASGCLQLLFQVLRGFC*AHNTSV
Trigger: GACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAG...CACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000444172.6
ENST00000587169.5
ENST00000590347.5
ENST00000592234.5
CDS-3UTR CCA 90 bp TCACTGGCGAAGCGCCTCTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCTCAGAGGGTTCTGTTaGGCGCACAACACTTCTGTC +
Preference number: 4 (lower is better)
Translates to: SLAKRLLQGTSLLGKRLPLRGFC*AHNTSV
Trigger: GACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAG...AGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGAGGCGCTTCGCCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585914.5
CDS-3UTR CCA 90 bp CCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGGGCGGGGGCGTTCACTaGTCTTCAATCCTGCTTAAG +
Preference number: 4 (lower is better)
Translates to: PTFTGLHIVVGKDWPPRKGGGVH*SSILLK
Trigger: CTTAAGCAGGATTGAAGACCAGTGAACGCCCCCGCC...CTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp CGTGCCTCTGCTCTCTGGCCTGCTTCTAGACTGAGGCAGTCCAGGTCAGCGTCAAGCCAGCTACCCGTATaGGATGGAGCTATGTGGGCC +
Preference number: 4 (lower is better)
Translates to: RASALWPASRLRQSRSASSQLPV*DGAMWA
Trigger: GGCCCACATAGCTCCATCCCATACGGGTAGCTGGCT...TGACGCTGACCTGGACTGCCTCAGTCTAGAAGCAGGCCAGAGAGCAGAGGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp GCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACAGCCAGCTACCCGTATaGGATGGAGCTATGTGGGCC +
Preference number: 4 (lower is better)
Translates to: AVAATPAGVLPHYTQKRHSQLPV*DGAMWA
Trigger: GGCCCACATAGCTCCATCCCATACGGGTAGCTGGCT...GTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp TGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCTTCATCTGATGCCATaGCGGCCTGTGGCAGACACC +
Preference number: 4 (lower is better)
Translates to: CHSSRKHLQGTSLLGKRLLHLMP*RPVADT
Trigger: GGTGTCTGCCACAGGCCGCCATGGCATCAGATGAAG...CAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586773.5
CDS-3UTR CCA 90 bp TTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCAGGCTTTTCTTCCAGTaGCCCCGCTCCGCCGACAGA +
Preference number: 4 (lower is better)
Translates to: FESDFHRAPHRCGQGLAARLFFQ*PRSADR
Trigger: TCTGTCGGCGGAGCGGGGCCACTGGAAGAAAAGCCT...GGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586636.5
ENST00000591376.5
CDS-3UTR TCA 90 bp GGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCGATCTGTCCGTACTTTaGGAAGACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: GQASWASGCLQLLFQVKSDLSVL*EDLLQR
Trigger: TCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATC...GGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
CDS-3UTR TCA 90 bp CCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCGATCTGTCCGTACTTTaGGAAGACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: PLFPKALTGDKPPGQAAADLSVL*EDLLQR
Trigger: TCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATC...GGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
CDS-3UTR TCA 90 bp AACGAGGCCATCCCGGCGTCAGAAGCGGTCAGGCTGGGTTTGACAAGATCAGAAACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: NEAIPASEAVRLGLTRSETGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...TTCTGATCTTGTCAAACCCAGCCTGACCGCTTCTGACGCCGGGATGGCCTCGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320936.9
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
CDS-3UTR TCA 90 bp GAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTGACTTACCGTTTGGAAGGACGATCTTaGGCAGGAAGGGTTTTTACT +
Preference number: 4 (lower is better)
Translates to: ELPPQATAAWRPRSVTYRLEGRS*AGRVFT
Trigger: AGTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAA...ACGGTAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp CCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACTCGATCTCAGAGAAGTaGGTGGGGCACCCACTTCAT +
Preference number: 4 (lower is better)
Translates to: PGQLLPHPPGSYHTTLRNSISEK*VGHPLH
Trigger: ATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGA...GTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp GCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTCTTCTGACACATGCACCTAGCTaGCTGCCCAGCGGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: AFASCDRNGSERTDAPLLTHAPS*LPSGPS
Trigger: CGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGT...CAGAAGAGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp CGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGGCTATTTCCACATATaGGCTAGCCAAGGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: RLPPALVPGEVPPGTVTPGYFHI*ASQGSS
Trigger: GCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGCC...TGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
ENST00000592234.5
CDS-3UTR TCA 90 bp CATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 4 (lower is better)
Translates to: HATLPESTYRGQASWASGSSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...GCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
CDS-3UTR TCA 90 bp ATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 4 (lower is better)
Translates to: IRLSQGSTSLWARTGRPVSSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...TACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR TCA 90 bp CTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 4 (lower is better)
Translates to: LYSNPTFTGLHIVVGKDWRDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...CCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR TCA 90 bp ACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGTCCTGCTCAGCACCCTaGTCCTCACCTTCCCATTCA +
Preference number: 4 (lower is better)
Translates to: TFTGLHIVVGKDWPPRKLSCSAP*SSPSHS
Trigger: TGAATGGGAAGGTGAGGATCAGGGTGCTGAGCAGGA...CAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590347.5
CDS-3UTR TCA 90 bp ATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCGGCCTGCTTCTAGACTaGGGCAGTCCAGGTCAGCGT +
Preference number: 4 (lower is better)
Translates to: IRIRLSQGSTSLWARTGRGLLLD*GSPGQR
Trigger: ACGCTGACCTGGACTGCCTCAGTCTAGAAGCAGGCC...GCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp GGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGAGAGAGCAGGACTCACTaGAACGCCCAGGTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: GPLFESDFHRAPHRCGQGESRTH*NAQVPP
Trigger: GGGCGGCACCTGGGCGTTTCAGTGAGTCCTGCTCTC...TCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR TCA 90 bp CACCTAGCTGACTGCCCAGCGGGCCCTCGCTCTCCCTTGCCTTTTTGGTCAGTCAAGTTTGCCTTCATCTaGTGCCATGGCGGCTACGAG +
Preference number: 4 (lower is better)
Translates to: HLADCPAGPRSPLPFWSVKFAFI*CHGGYE
Trigger: CTCGTAGCCGCCATGGCATCAGATGAAGGCAAACTT...GACTGACCAAAAAGGCAAGGGAGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586548.5
CDS-3UTR GCA 90 bp CCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTGACTTACCGTAACTGTTGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 4 (lower is better)
Translates to: PPQATAAWRPRSVTYRNCWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...ACAGTTACGGTAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000591097.5
CDS-3UTR GCA 90 bp GCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCTATAGTAGTCGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGA +
Preference number: 4 (lower is better)
Translates to: ARAPVTVATTLTPAAIVVGCLTT*LPGLLG
Trigger: TCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACC...GACTACTATAGCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR GCA 90 bp ACTGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGA +
Preference number: 4 (lower is better)
Translates to: TVSVGPARAPVTVATTLTGCLTT*LPGLLG
Trigger: TCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACC...AGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591097.5
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR GCA 90 bp TCAGCTTCCGACAAAGAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTGGGCTCCAGGGCAGTTaGTGCCACACCCGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: SASDKERIHSPFDLREVSGLQGS*CHTRRG
Trigger: ACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCC...ACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTCTTTGTCGGAAGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp CGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTGACTTACCGGAATTCCTCAGCCACTaGAAATACAACATCGATGGA +
Preference number: 4 (lower is better)
Translates to: RAPTAGHSSVAPSECDLPEFLSH*KYNIDG
Trigger: TCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTC...CGGTAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp CAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAGCAGGACTTGGCTTTTGCGTCCTaGGATAGAAATGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: QHTPKGARHGAIGAGEQDLAFAS*DRNGSE
Trigger: CTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAA...GTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587896.6
CDS-3UTR GCA 90 bp GAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTCAATGCACCTAGCTGACTaGCCAGCGGGCCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: ERIHSPFDLREVSGAPTSMHLAD*PAGPRS
Trigger: AGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCAT...TGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp CTGAGAGGACAGATGCGCCTCTTCTGGGCAAGCACAGTGACAAGGTCTGAGTGTATGCACCTAGCTGACTaGCCAGCGGGCCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: LRGQMRLFWASTVTRSECMHLAD*PAGPRS
Trigger: AGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCAT...ACACTCAGACCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTGTCCTCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR GCA 90 bp CTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCGAGTGTGTGGTGCAATaGAAGGGAATTGTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LCRTRPSSGHCSHHSDSGECVVQ*KGIVRA
Trigger: TGCTCTGACAATTCCCTTGCATTGCACCACACACTC...GCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp AGTAACGAGGCCATCCCGGCGTCAGAAGCGGTCAGGCTGGGTTTGACAAGATCACAGGTCAGCGTCAGGTaGACGTCCACTGTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: SNEAIPASEAVRLGLTRSQVSVR*TSTVPA
Trigger: AGCAGGGACAGTGGACGTGCACCTGACGCTGACCTG...TGATCTTGTCAAACCCAGCCTGACCGCTTCTGACGCCGGGATGGCCTCGTTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp AAAGAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTGCCATGGCGGCCTGTaGCTCTGGGGTCAGCTGCGT +
Preference number: 4 (lower is better)
Translates to: KERIHSPFDLREVSGAPTCHGGL*LWGQLR
Trigger: ACGCAGCTGACCCCAGAGGCACAGGCCGCCATGGCA...AGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588090.5
CDS-3UTR CCA 90 bp AGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGCCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: RGQASWASGCLQLLFQVKPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...CTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
CDS-3UTR CCA 90 bp GAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGCCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: ESDFHRAPHRCGQGLAAPPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...CGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR CCA 90 bp GGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGCCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: GKRLPPALVPGEVPPGTVPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...CACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
CDS-3UTR CCA 90 bp TGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCCCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: CLCRTRPSSGHCSHHSDSPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...GGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR CCA 90 bp ACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCTATAGTCCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: TRPSSGHCSHHSDSGCYSPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...ACTATAGCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR CCA 90 bp ACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: TCHSSRKHLQGTSLLGKRDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...CCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
CDS-3UTR CCA 90 bp ATAACTGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: ITVSVGPARAPVTVATTLDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...CAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACAGTTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591097.5
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR CCA 90 bp AAAGAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: KERIHSPFDLREVSGAPTRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...AGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp GTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: VHTWPFIRIRLSQGSTSLRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...CAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp TCTGGGTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: SGCTRGPLFESDFHRAPHRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...ATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCACCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp ACCACAGACTCGGCTTTCTGGGTGCACACGTGGCCCTTTATTCGAATCCGACTTCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: TTDSAFWVHTWPFIRIRLRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...AAGTCGGATTCGAATAAAGGGCCACGTGTGCACCCAGAAAGCCGAGTCTGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586636.5
ENST00000591376.5
CDS-3UTR CCA 90 bp AGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: RAVAATPAGVLPHYTQKRCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...ACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp CTAGCTGACTGCCCAGCGGGCCCTCGCTCTCCCTTGCCTTTTTGGTCAGTCTCATGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: LADCPAGPRSPLPFWSVSCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...TGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGCCCGCTGGGCAGTCAGCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CCA 90 bp TCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: SNPTFTGLHIVVGKDWPPCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...GGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp GCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTCTTCTGCAGGCCACAGCAGCGTaGCGCCCTCGGAGTGTGACT +
Preference number: 4 (lower is better)
Translates to: AFASCDRNGSERTDAPLLQATAA*RPRSVT
Trigger: AGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTG...CAGAAGAGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CCA 90 bp CGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCTATAGTAGTCAGATGCGCCTCTTCTaGGCAAGCACAGTGACAAGG +
Preference number: 4 (lower is better)
Translates to: RPSSGHCSHHSDSGCYSSQMRLF*ASTVTR
Trigger: CCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTG...ACTACTATAGCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590171.1
CDS-3UTR CCA 90 bp AACCACAGACTCGGCTTTCTGGGTGCACACGTGGCCCTTTATTCGAATCCGACTAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: NHRLGFLGAHVALYSNPTRGQAS*ASGCLQ
Trigger: CTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT...AGTCGGATTCGAATAAAGGGCCACGTGTGCACCCAGAAAGCCGAGTCTGTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586636.5
ENST00000591376.5
CDS-3UTR CCA 90 bp CGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGTTGTGGGCAAGGACTaGCCGCCCCGTAAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: RGPLFESDFHRAPHRCGQVVGKD*PPRKLP
Trigger: CGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAAC...TTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp GTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGGGCTCCACATCGTTGTaGGCAAGGACTGGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: VHTWPFIRIRLSQGSTSLGSTSL*ARTGRP
Trigger: GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCC...CAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp GCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCGGGTCTGCACCTTaGCGCAGCTGGAGCCAGCTA +
Preference number: 4 (lower is better)
Translates to: AHVALYSNPTFTGLHIVVGGSAP*RSWSQL
Trigger: TAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCC...CACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp GTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGAGCCCGCACCTCACTaGCGAAGCGCCTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: VALYSNPTFTGLHIVVGKEPAPH*RSASWK
Trigger: CTTCCAGGAGGCGCTTCGCCAGTGAGGTGCGGGCTC...CTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp CGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCTATAGTAGTTGCCATGGCGGCCTGTaGCAGACACCAATGAAATCC +
Preference number: 4 (lower is better)
Translates to: RPSSGHCSHHSDSGCYSSCHGGL*QTPMKS
Trigger: GGATTTCATTGGTGTCTGCCACAGGCCGCCATGGCA...ACTACTATAGCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592412.5
CDS-3UTR CCA 90 bp GCTCCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGATTCTGGGTGCACACGTaGCCCTTTATTCGAATCCGA +
Preference number: 4 (lower is better)
Translates to: APGQLLPHPPGSYHTTLRFWVHT*PFIRIR
Trigger: TCGGATTCGAATAAAGGGCCACGTGTGCACCCAGAA...TCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp TTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCGT +
Preference number: 4 (lower is better)
Translates to: FIRIRLSQGSTSLWARTGPFPES*PGPFNR
Trigger: ACGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGG...GCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000589235.5
ENST00000591376.5
CDS-3UTR CCA 90 bp TTCTGGGTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACAGAGCCCGCACCTCACTaGCGAAGCGCAGGGGACAAG +
Preference number: 4 (lower is better)
Translates to: FWVHTWPFIRIRLSQGSTEPAPH*RSAGDK
Trigger: CTTGTCCCCTGCGCTTCGCCAGTGAGGTGCGGGCTC...TGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCACCCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585913.5
CDS-3UTR TCA 90 bp CAGCGCCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGGATCTGTCCGTACTTTaGGAAGACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: QRHMPLFPKALTGDKPPGDLSVL*EDLLQR
Trigger: TCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATC...CCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
CDS-3UTR TCA 90 bp TTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGGATCTGTCCGTACTTTaGGAAGACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: LLPHPPGSYHTTLRNVTRDLSVL*EDLLQR
Trigger: TCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATC...CCGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp GCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACTCGATCTCAGAGAAGTaGGTGGGGCACCCACTTCAT +
Preference number: 4 (lower is better)
Translates to: AVAATPAGVLPHYTQKRHSISEK*VGHPLH
Trigger: ATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGA...GTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp AGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTCATGGGGCCAACCCGGCGCCCTCGGAGTGTaGCTTACCGTAACTGTCATA +
Preference number: 4 (lower is better)
Translates to: SPFDLREVSGAPTSWGQPGALGV*LTVTVI
Trigger: TATGACAGTTACGGTAAGTCACACTCCGAGGGCGCC...GGGTTGGCCCCATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp CCTGGCCGGGCCCCTTCAACCTCGAATTACAGGGCTATTTCCACATATGAGCTATCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: PGRAPSTSNYRAISTYELSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...TAGCTCATATGTGGAAATAGCCCTGTAATTCGAGGTTGAAGGGGCCCGGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000592234.5
CDS-3UTR TCA 90 bp ATAACTGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGTCCTGCTCAGCACCCTaGTCCTCACCTTCCCATTCA +
Preference number: 4 (lower is better)
Translates to: ITVSVGPARAPVTVATTLSCSAP*SSPSHS
Trigger: TGAATGGGAAGGTGAGGATCAGGGTGCTGAGCAGGA...CAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACAGTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590347.5
ENST00000591055.5
CDS-3UTR TCA 90 bp CCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGAGTTGGCATTCCCCGGGCACATaGCTTTCAGTGAGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: PHPPGSYHTTLRNVTRSWHSPGT*LSVSSQ
Trigger: TTGAGAGCTCACTGAAAGTCATGTGCCCGGGGAATG...CCAACTCCGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp CACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGTCTATGAGCCAGGCATaGCTGGGCCCAGGCTGCACC +
Preference number: 4 (lower is better)
Translates to: HTWPFIRIRLSQGSTSLWSMSQA*LGPGCT
Trigger: GGTGCAGCCTGGGCCCAGTCATGCCTGGCTCATAGA...CCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp GCTCAGCGCCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTAAGTTTGCCTTCATCTaGTGCCATGGCGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: AQRHMPLFPKALTGDKPPKFAFI*CHGGLW
Trigger: CCACAGGCCGCCATGGCATCAGATGAAGGCAAACTT...AGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGCGCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586773.5
CDS-3UTR TCA 90 bp CCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCTATAGTAGTCTCTGGAGCCAAGTTTGCCTTCATCTaGTGCCATGGCGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PVTVATTLTPAAIVVSGAKFAFI*CHGGLW
Trigger: CCACAGGCCGCCATGGCATCAGATGAAGGCAAACTT...GGCTCCAGAGACTACTATAGCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592412.5
CDS-3UTR TCA 90 bp CGCCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAAAGTTTGCCTTCATCTaGTGCCATGGCGGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: RHMPLFPKALTGDKPPGQKFAFI*CHGGLC
Trigger: GCACAGGCCGCCATGGCATCAGATGAAGGCAAACTT...TTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591935.5
CDS-3UTR GCA 90 bp GAAGCGCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTTACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: EAPQGTSLLGKRLPPALVYFEKT*SSDCSL
Trigger: CAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTA...AACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGCGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR GCA 90 bp TCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTTGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 4 (lower is better)
Translates to: SRKHLQGTSLLGKRLPPAWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...AGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
CDS-3UTR GCA 90 bp TGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCTGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 4 (lower is better)
Translates to: CLCRTRPSSGHCSHHSDSWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...GGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591097.5
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR GCA 90 bp CCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCTATAGTAGTCTCTGGAGCCGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGA +
Preference number: 4 (lower is better)
Translates to: PVTVATTLTPAAIVVSGAGCLTT*LPGLLG
Trigger: TCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACC...GGCTCCAGAGACTACTATAGCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR GCA 90 bp GGGCTGGGGCTCCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTAAACATCGATGGAGTATaGGTACGTCTTCCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: GLGLQGSCCHTRRGPTTLNIDGV*VRLPVK
Trigger: TTTTACTGGAAGACGTACGCATACTCCATCGATGTT...TAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp GCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGCTGCTCAGGTCTGGCTaGAGGAGCCCGCAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: AHVALYSNPTFTGLHIVVLLRSG*RSPQQG
Trigger: TCCTTGCTGCGGGCTCCTGCAGCCAGACCTGAGCAG...CACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp CCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTCATCCGGGCCCCTTCAACCTaGCAAAGCAAAGCAGCGTTA +
Preference number: 4 (lower is better)
Translates to: PALVPGEVPPGTVTPEVIRAPST*QSKAAL
Trigger: TAACGCTGCTTTGCTTTGGCAGGTTGAAGGGGCCCG...GATGACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp AGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTCATGGGGCCAACCCCGGGCCCCTTCAACCTaGCAAAGCAAAGCAGCGTTA +
Preference number: 4 (lower is better)
Translates to: SPFDLREVSGAPTSWGQPRAPST*QSKAAL
Trigger: TAACGCTGCTTTGCTTTGGCAGGTTGAAGGGGCCCG...GGGTTGGCCCCATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp TTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGCCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LLPHPPGSYHTTLRNVTRPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...CCGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp GCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCTATAGTAGTCCCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: ARAPVTVATTLTPAAIVVPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...GACTACTATAGCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR CCA 90 bp CGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAAATCCCCGAGATCTCTaGGTCTCCCTGTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: RLPPALVPGEVPPGTVTPNPRDL*VSLSFT
Trigger: TGTGAAAGACAGGGAGACCCAGAGATCTCGGGGATT...TGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591935.5
CDS-3UTR CCA 90 bp CTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAAATCCCCGAGATCTCTaGGTCTCCCTGTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: LGKRLPPALVPGEVPPGTNPRDL*VSLSFT
Trigger: TGTGAAAGACAGGGAGACCCAGAGATCTCGGGGATT...TGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591935.5
CDS-3UTR CCA 90 bp TCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGAAATCCCCGAGATCTCTaGGTCTCCCTGTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: SWASGCLQLLFQVKSLLGNPRDL*VSLSFT
Trigger: TGTGAAAGACAGGGAGACCCAGAGATCTCGGGGATT...TCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591935.5
CDS-3UTR CCA 90 bp ATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: IRIRLSQGSTSLWARTGRDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...GCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
CDS-3UTR CCA 90 bp CCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: PLFESDFHRAPHRCGQGLRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...CAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp CTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: LYSNPTFTGLHIVVGKDWRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...CCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp AGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTCATGGGGCCAACCCTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: SPFDLREVSGAPTSWGQPCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...GGGTTGGCCCCATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp ATAACTGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: ITVSVGPARAPVTVATTLCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...CAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACAGTTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR CCA 90 bp CCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCTATAGTAGTCTCTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: PSSGHCSHHSDSGCYSSLCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...GAGACTACTATAGCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR CCA 90 bp ACATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCTCTGCACGTCTACTGTaGGGCGCACAGCACAGATGG +
Preference number: 4 (lower is better)
Translates to: TSSRTSQGRLHVYCGAHSSARLL*GAQHRW
Trigger: CCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGA...GCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp TACTCGTTGTGTGTAGCTGAGGACAAGAAGCAGGCACAGTGTAAAGGCACCGAAGAGCCCGCACCTCACTaGCGAAGCGCCTCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: YSLCVAEDKKQAQCKGTEEPAPH*RSASGD
Trigger: GTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTC...TTCGGTGCCTTTACACTGTGCCTGCTTCTTGTCCTCAGCTACACACAACGAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR CCA 90 bp CGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCTCAACAAGAGGGATGTaGACACGAGCGGAAGGAGTT +
Preference number: 4 (lower is better)
Translates to: RIRLSQGSTSLWARTGRPSTRGM*TRAEGV
Trigger: AACTCCTTCCGCTCGTGTCCACATCCCTCTTGTTGA...GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp AGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTCATGGGGCCAACCCGCTACCCGTATGGGATaGAGCTATGTGGGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: SPFDLREVSGAPTSWGQPATRMG*SYVGQC
Trigger: ACACTGGCCCACATAGCTCCATCCCATACGGGTAGC...GGGTTGGCCCCATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp TGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTCTTCTGGGCAAGCACAGTGCACCTTGGCGCAGCTaGAGCCAGCTACCCGTATGG +
Preference number: 4 (lower is better)
Translates to: CDRNGSERTDAPLLGKHSAPWRS*SQLPVW
Trigger: CCATACGGGTAGCTGGCTCCAGCTGCGCCAAGGTGC...ACTGTGCTTGCCCAGAAGAGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR CCA 90 bp ACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGTGCCATGGCGGCCTGTaGCAGACACCAATGAAATCC +
Preference number: 4 (lower is better)
Translates to: TCHSSRKHLQGTSLLGKRCHGGL*QTPMKS
Trigger: GGATTTCATTGGTGTCTGCCACAGGCCGCCATGGCA...CCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586773.5
CDS-3UTR CCA 90 bp CGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCTTCTGGGTGCACACGTaGCCCTTTATTCGAATCCGA +
Preference number: 4 (lower is better)
Translates to: RIRLSQGSTSLWARTGRPFWVHT*PFIRIR
Trigger: TCGGATTCGAATAAAGGGCCACGTGTGCACCCAGAA...GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp TTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTTCTGGGTGCACACGTaGCCCTTTATTCGAATCCGA +
Preference number: 4 (lower is better)
Translates to: FPKALTGDKPPGQAAASSFWVHT*PFIRIR
Trigger: TCGGATTCGAATAAAGGGCCACGTGTGCACCCAGAA...GCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp AAAGAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTGCTGGGGAGAGCTGGTaGTCGCGTCTCCCCCATACT +
Preference number: 4 (lower is better)
Translates to: KERIHSPFDLREVSGAPTAGESW*SRLPHT
Trigger: AGTATGGGGGAGACGCGACCACCAGCTCTCCCCAGC...AGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588030.5
CDS-3UTR CCA 90 bp CTGGGTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCAGGCTTTTCTTCCAGTaGCCCCGCTCCGCCGACAGA +
Preference number: 4 (lower is better)
Translates to: LGAHVALYSNPTFTGLHIRLFFQ*PRSADR
Trigger: TCTGTCGGCGGAGCGGGGCCACTGGAAGAAAAGCCT...GATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586636.5
ENST00000591376.5
3UTR CAA 72 bp TTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTaGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: FIRIRLSQGSTS*WARTGRPVSCR
Trigger: CCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR CAA 72 bp CACCTAGCTGACTGCCCAGCGGGCCCTCGCTCTCCCTaGCCTTTTTGGTCAGTCTCATTTGGCTTTTGCGTC +
Preference number: 4 (lower is better)
Translates to: HLADCPAGPRSP*PFWSVSFGFCV
Trigger: GACGCAAAAGCCAAATGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp CCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCTATAGTAGTCTCGATCTGTCCGTACTTTaGGAAGACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: PSSGHCSHHSDSGCYSSLDLSVL*EDLLQR
Trigger: TCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATC...GAGACTACTATAGCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR TCA 90 bp ATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTACGGTCAGGCTGGGTTTaGCAAGATCAGAACCGAAAT +
Preference number: 4 (lower is better)
Translates to: IRLSQGSTSLWARTGRPVRSGWV*QDQNRN
Trigger: ATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCG...TACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp GCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCTATAGTAGTCCGGTCAGGCTGGGTTTaGCAAGATCAGAACCGAAAT +
Preference number: 4 (lower is better)
Translates to: ARAPVTVATTLTPAAIVVRSGWV*QDQNRN
Trigger: ATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCG...GACTACTATAGCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000593048.5
CDS-3UTR TCA 90 bp AGTAACGAGGCCATCCCGGCGTCAGAAGCGGTCAGGCTGGGTTTGACAAGATCAGGCGCCCTCGGAGTGTaGCTTACCGTAACTGTCATA +
Preference number: 4 (lower is better)
Translates to: SNEAIPASEAVRLGLTRSGALGV*LTVTVI
Trigger: TATGACAGTTACGGTAAGTCACACTCCGAGGGCGCC...TGATCTTGTCAAACCCAGCCTGACCGCTTCTGACGCCGGGATGGCCTCGTTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp GCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTCTTCTGGGCAAGGGCGCCCTCGGAGTGTaGCTTACCGTAACTGTCATA +
Preference number: 4 (lower is better)
Translates to: ASCDRNGSERTDAPLLGKGALGV*LTVTVI
Trigger: TATGACAGTTACGGTAAGTCACACTCCGAGGGCGCC...CTTGCCCAGAAGAGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp CAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGCACAGTGACAAGGTCTaGGTGTCCAGCCTAAAGTGC +
Preference number: 4 (lower is better)
Translates to: QEPLRDVCTSTVGRTAQMHSDKV*VSSLKC
Trigger: GCACTTTAGGCTGGACACTCAGACCTTGTCACTGTG...CATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp GTCATAACTGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCACAGTGACAAGGTCTaGGTGTCCAGCCTAAAGTGC +
Preference number: 4 (lower is better)
Translates to: VITVSVGPARAPVTVATTHSDKV*VSSLKC
Trigger: GCACTTTAGGCTGGACACTCAGACCTTGTCACTGTG...AGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACAGTTATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp CAGGCACAGTGTAAAGGCACCGAAGCAACAAGAGGCAGCTTCACCCCAGAGGCCCATTCCCCGGGCACATaGCTTTCAGTGAGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: QAQCKGTEATRGSFTPEAHSPGT*LSVSSQ
Trigger: TTGAGAGCTCACTGAAAGTCATGTGCCCGGGGAATG...GGCCTCTGGGGTGAAGCTGCCTCTTGTTGCTTCGGTGCCTTTACACTGTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR TCA 90 bp CCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTCATCAAGGGATTTCATCTATaGGCCAGGCATGACTGGGCC +
Preference number: 4 (lower is better)
Translates to: PALVPGEVPPGTVTPEVIKGFHL*ARHDWA
Trigger: GGCCCAGTCATGCCTGGCTCATAGATGAAATCCCTT...GATGACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp CATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGTGGCAGACACCAATaGAATCCTCAACAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: HATLPESTYRGQASWASGCGRHQ*NPQQGS
Trigger: TGACCCCTGTTGAGGATTTCATTGGTGTCTGCCACA...GCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586773.5
CDS-3UTR TCA 90 bp ACTGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTTGTGGCAGACACCAATaGAATCCTCAACAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: TVSVGPARAPVTVATTLTCGRHQ*NPQQGS
Trigger: TGACCCCTGTTGAGGATTTCATTGGTGTCTGCCACA...AGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592412.5
CDS-3UTR GCA 90 bp TGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCTACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: CLCRTRPSSGHCSHHSDSYFEKT*SSDCSL
Trigger: CAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTA...GGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR GCA 90 bp CCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: PLFPKALTGDKPPGQAAAYFEKT*SSDCSL
Trigger: CAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTA...GGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
CDS-3UTR GCA 90 bp GGTCAGGCTGGGTTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATAGGGCTCCAGGGCAGTTaGTGCCACACCCGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: GQAGFDKIRTEMTTKVGIGLQGS*CHTRRG
Trigger: ACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCC...TATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp CCTCAGCCACTGCAAATACAACATCGATGGAGTATGCGTACGTCTTCCAGTAAAGGGCTCCAGGGCAGTTaGTGCCACACCCGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: PQPLQIQHRWSMRTSSSKGLQGS*CHTRRG
Trigger: ACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCC...TTTACTGGAAGACGTACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp AGTAACGAGGCCATCCCGGCGTCAGAAGCGGTCAGGCTGGGTTTGACAAGATCAGTGTCCAGCCTAAAGTaGTTGGAGAGGGCACCAAGG +
Preference number: 4 (lower is better)
Translates to: SNEAIPASEAVRLGLTRSVSSLK*LERAPR
Trigger: CCTTGGTGCCCTCTCCAAGCACTTTAGGCTGGACAC...TGATCTTGTCAAACCCAGCCTGACCGCTTCTGACGCCGGGATGGCCTCGTTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp GAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTTGGCTTTTGCGTCCTaGGATAGAAATGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: ESDFHRAPHRCGQGLAAPLAFAS*DRNGSE
Trigger: CTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAA...CGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp CCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCTATAGTAGTCTCTGGAGCCGCCCTCGCTCTCCCTTaGCTTTTTGGTCAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: PVTVATTLTPAAIVVSGAALALP*LFGQSH
Trigger: ATGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGC...GGCTCCAGAGACTACTATAGCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590171.1
CDS-3UTR GCA 90 bp CATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTATGCACCTAGCTGACTaGCCAGCGGGCCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: HLAFASCDRNGSERTDAPMHLAD*PAGPRS
Trigger: AGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCAT...AGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR GCA 90 bp CATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTGAGGTCGCCCTGGGATaGCACGTGCCTCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: HLAFASCDRNGSERTDAPEVALG*HVPLLS
Trigger: AGAGAGCAGAGGCACGTGGCATCCCAGGGCGACCTC...AGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp TTTCTGGGTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACTCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: FLGAHVALYSNPTFTGLHSWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...GTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCACCCAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR GCA 90 bp CCTCAGCCACTGCAAATACAACATCGATGGAGTATGCGTACGTCTTCCAGTAAAAGGGGGCCAGGGTCCTaGCCAGGCCACGAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: PQPLQIQHRWSMRTSSSKRGPGS*PGHEAG
Trigger: GCCTGCTTCGTGGCCTGGGCAGGACCCTGGCCCCCT...TTTACTGGAAGACGTACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588030.5
CDS-3UTR GCA 90 bp TATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCTGTCCTCCGAGGGCTaGAGCTTCCATAGGCGTAAC +
Preference number: 4 (lower is better)
Translates to: YSNPTFTGLHIVVGKDWPLSSEG*SFHRRN
Trigger: GTTACGCCTATGGAAGCTGCAGCCCTCGGAGGACAG...CGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592234.5
CDS-3UTR CCA 90 bp CTTGCGTCTCAGAGGGTTCTGTTGGGCGCACAACACTTCTGTCCTCCGAGGGCTCCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LASQRVLLGAQHFCPPRAPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...AGCCCTCGGAGGACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGACGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp GCCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: ATCHSSRKHLQGTSLLGKPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...CTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
CDS-3UTR CCA 90 bp ACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTAATCCCCGAGATCTCTaGGTCTCCCTGTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: TSLLGKRLPPALVPGEVPNPRDL*VSLSFT
Trigger: TGTGAAAGACAGGGAGACCCAGAGATCTCGGGGATT...AGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591935.5
CDS-3UTR CCA 90 bp CAGCGCCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGAATCCCCGAGATCTCTaGGTCTCCCTGTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: QRHMPLFPKALTGDKPPGNPRDL*VSLSFT
Trigger: TGTGAAAGACAGGGAGACCCAGAGATCTCGGGGATT...CCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
CDS-3UTR CCA 90 bp CACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGAGTTGGAAATGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: HPPGSYHTTLRNVTRSWKCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...TTTCCAACTCCGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp ACATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: TSSRTSQGRLHVYCGAHSCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...GCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp ACATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCCAGATGCGCCTCTTCTaGGCAAGCACAGTGACAAGG +
Preference number: 4 (lower is better)
Translates to: TSSRTSQGRLHVYCGAHSQMRLF*ASTVTR
Trigger: CCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTG...GCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp CCAAAGCAAAGCAGCGTTACTCCCAACGTCCTCCACAGGGCTCACAGCTGCCCCGCAGCAAGGAGTGTGTaGTGCAATGCAAGGGAATTG +
Preference number: 4 (lower is better)
Translates to: PKQSSVTPNVLHRAHSCPAARSV*CNAREL
Trigger: CAATTCCCTTGCATTGCACCACACACTCCTTGCTGC...GGGGCAGCTGTGAGCCCTGTGGAGGACGTTGGGAGTAACGCTGCTTTGCTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp TGCTCAGCTTCCGACAAAGAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGGCACCTTGGCGCAGCTaGAGCCAGCTACCCGTATGG +
Preference number: 4 (lower is better)
Translates to: CSASDKERIHSPFDLREVAPWRS*SQLPVW
Trigger: CCATACGGGTAGCTGGCTCCAGCTGCGCCAAGGTGC...CACTTCTCTGAGATCGAACGGACTGTGAATCCGCTCTTTGTCGGAAGCTGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp CACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGAGTTGGAAATGCCATGGCGGCCTGTaGCAGACACCAATGAAATCC +
Preference number: 4 (lower is better)
Translates to: HPPGSYHTTLRNVTRSWKCHGGL*QTPMKS
Trigger: GGATTTCATTGGTGTCTGCCACAGGCCGCCATGGCA...TTTCCAACTCCGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589710.5
CDS-3UTR CCA 90 bp ACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTTTCTGGGTGCACACGTaGCCCTTTATTCGAATCCGA +
Preference number: 4 (lower is better)
Translates to: TSLLGKRLPPALVPGEVPFWVHT*PFIRIR
Trigger: TCGGATTCGAATAAAGGGCCACGTGTGCACCCAGAA...AGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp AAAGAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTCTTCATCTGATGCCATaGCGGCCTGTGCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: KERIHSPFDLREVSGAPTLHLMP*RPVPLG
Trigger: CCCCAGAGGCACAGGCCGCCATGGCATCAGATGAAG...AGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588090.5
CDS-3UTR TCA 90 bp AGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCTGCCATGGCGGCCACTaGGTCGGGCAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: SGNTRRCIYYTLTFSEAPCHGGH*VGQVPD
Trigger: GTCAGGGACCTGCCCGACTCAGTGGCCGCCATGGCA...GGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR TCA 90 bp ATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACGATCTGTCCGTACTTTaGGAAGACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: IFKNLSGTSARLLWGAQHDLSVL*EDLLQR
Trigger: TCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATC...GTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp AGTAACGAGGCCATCCCGGCGTCAGAAGCGGTCAGGCTGGGTTTGACAAGATCAGATCTGTCCGTACTTTaGGAAGACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: SNEAIPASEAVRLGLTRSDLSVL*EDLLQR
Trigger: TCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATC...TGATCTTGTCAAACCCAGCCTGACCGCTTCTGACGCCGGGATGGCCTCGTTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
CDS-3UTR TCA 90 bp AGTGTAAAGGCACCGAAGCAACAAGAGGCAGCTTCACCCCAGAGGCCAGACCAGGATCTGTCCGTACTTTaGGAAGACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: SVKAPKQQEAASPQRPDQDLSVL*EDLLQR
Trigger: TCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATC...CTGGTCTGGCCTCTGGGGTGAAGCTGCCTCTTGTTGCTTCGGTGCCTTTACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp CCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: PLFESDFHRAPHRCGQGLTGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...CAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
CDS-3UTR TCA 90 bp GCTCCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAGATCAGAACCGAAATaGCTACGAAAGTGGGAATAC +
Preference number: 4 (lower is better)
Translates to: APGQLLPHPPGSYHTTLRRSEPK*LRKWEY
Trigger: GTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCT...TCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp GAGTGTGTGGTGCAATGCAAGGGAATTGTCAGAGCAAGGTTCATTTCACACGGTGAGAGGGCACCAAGGTaGACCGAGCTCCCACCGCAG +
Preference number: 4 (lower is better)
Translates to: ECVVQCKGIVRARFISHGERAPR*TELPPQ
Trigger: CTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTCTC...ACCGTGTGAAATGAACCTTGCTCTGACAATTCCCTTGCATTGCACCACACACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp GCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACTACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: AVAATPAGVLPHYTQKRHYFEKT*SSDCSL
Trigger: CAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTA...GTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp CGAGGCCATCCCGGCGTCAGAAGCGGTCAGGCTGGGTTTGACAAGATCAGAACCTACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: RGHPGVRSGQAGFDKIRTYFEKT*SSDCSL
Trigger: CAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTA...GGTTCTGATCTTGTCAAACCCAGCCTGACCGCTTCTGACGCCGGGATGGCCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
CDS-3UTR GCA 90 bp ACTGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTTACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: TVSVGPARAPVTVATTLTYFEKT*SSDCSL
Trigger: CAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTA...AGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR GCA 90 bp GTTGGGCGCACAACACTTCTGTCCTCCGAGGGCTGCAGCTTCCATAGGCTAGCATGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 4 (lower is better)
Translates to: VGRTTLLSSEGCSFHRLAWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...TGCTAGCCTATGGAAGCTGCAGCCCTCGGAGGACAGAAGTGTTGTGCGCCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000587896.6
CDS-3UTR GCA 90 bp CCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTCATCTGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 4 (lower is better)
Translates to: PALVPGEVPPGTVTPEVIWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...GATGACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
ENST00000591935.5
CDS-3UTR GCA 90 bp GCCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGTGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 4 (lower is better)
Translates to: ATCHSSRKHLQGTSLLGKWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...CTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
CDS-3UTR GCA 90 bp GTCATAACTGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTTGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 4 (lower is better)
Translates to: VITVSVGPARAPVTVATTWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...AGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACAGTTATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591097.5
ENST00000591376.5
ENST00000593048.5
CDS-3UTR GCA 90 bp ACCGAAGCAACAAGAGGCAGCTTCACCCCAGAGGCCAGACCAGGGCGCGGCCTGGGGAATACAAGGAGGTaGATTTACTACACATTAACG +
Preference number: 4 (lower is better)
Translates to: TEATRGSFTPEARPGRGLGNTRR*IYYTLT
Trigger: CGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC...CAGGCCGCGCCCTGGTCTGGCCTCTGGGGTGAAGCTGCCTCTTGTTGCTTCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR GCA 90 bp CCTCAGCCACTGCAAATACAACATCGATGGAGTATGCGTACGTCTTCCAGTAAACTCCAGGGCAGTTGCTaGCACACCCGCCGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: PQPLQIQHRWSMRTSSSKLQGSC*HTRRGP
Trigger: AGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAG...TTTACTGGAAGACGTACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp GCTCCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAGAATTCCTCAGCCACTaGAAATACAACATCGATGGA +
Preference number: 4 (lower is better)
Translates to: APGQLLPHPPGSYHTTLREFLSH*KYNIDG
Trigger: TCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTC...TCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp GAAATGGCTCTGAGAGGACAGATGCGCCTCTTCTGGGCAAGCACAGTGACAAGGGTGTCCAGCCTAAAGTaGTTGGAGAGGGCACCAAGG +
Preference number: 4 (lower is better)
Translates to: EMALRGQMRLFWASTVTRVSSLK*LERAPR
Trigger: CCTTGGTGCCCTCTCCAAGCACTTTAGGCTGGACAC...CCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTGTCCTCTCAGAGCCATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR GCA 90 bp CCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGAGTTGGTTGGCTTTTGCGTCCTaGGATAGAAATGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: PHPPGSYHTTLRNVTRSWLAFAS*DRNGSE
Trigger: CTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAA...CCAACTCCGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp AGGGAGCAGCTTGCGTCTCAGAGGGTTCTGTTGGGCGCACAACACTTCTGTCCTGCCCTCGCTCTCCCTTaGCTTTTTGGTCAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: REQLASQRVLLGAQHFCPALALP*LFGQSH
Trigger: ATGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGC...AGGACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGACGCAAGCTGCTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp CCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGTCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: PLFESDFHRAPHRCGQGLSWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...CAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR GCA 90 bp TGGCGCCCTCGGAGTGTGACTTACCGTAACTGTCATAACTGTCTCTGTAGGACCAGGCCCTCCCGCTTCTaGGAATGTCCTGAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: WRPRSVTYRNCHNCLCRTRPSRF*ECPEQS
Trigger: AGACTGCTCAGGACATTCGCAGAAGCGGGAGGGCCT...GGTCCTACAGAGACAGTTATGACAGTTACGGTAAGTCACACTCCGAGGGCGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591097.5
CDS-3UTR CCA 90 bp GCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACCTTCATCTGATGCCATaGCGGCCACTGAGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: ALYSNPTFTGLHIVVGKDLHLMP*RPLSRA
Trigger: TGCCCGACTCAGTGGCCGCCATGGCATCAGATGAAG...GTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR CCA 90 bp TCTGGGTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: SGCTRGPLFESDFHRAPHDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...ATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCACCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
CDS-3UTR CCA 90 bp GCGGAAGGAGTTACCTCGAATTACAGGGCTATTTCCACATATGAGCTAGCCAAGACAGCCGAGGGAGGCTaGCCTGCGGCCACACATGCA +
Preference number: 4 (lower is better)
Translates to: AEGVTSNYRAISTYELAKTAEGG*PAATHA
Trigger: TGCATGTGTGGCCGCAGGCCAGCCTCCCTCGGCTGT...CTTGGCTAGCTCATATGTGGAAATAGCCCTGTAATTCGAGGTAACTCCTTCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp CAGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATACAGCCGAGGGAGGCTaGCCTGCGGCCACACATGCA +
Preference number: 4 (lower is better)
Translates to: QSHLAFASCDRNGSERTDTAEGG*PAATHA
Trigger: TGCATGTGTGGCCGCAGGCCAGCCTCCCTCGGCTGT...ATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CCA 90 bp CACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGAGTTGGAAACTCAGAGGGTTCTGTTaGGCGCACAACACTTCTGTC +
Preference number: 4 (lower is better)
Translates to: HPPGSYHTTLRNVTRSWKLRGFC*AHNTSV
Trigger: GACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAG...TTTCCAACTCCGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp GAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTCAGGCGGGGGCGTTCACTaGTCTTCAATCCTGCTTAAG +
Preference number: 4 (lower is better)
Translates to: ERIHSPFDLREVSGAPTSGGGVH*SSILLK
Trigger: CTTAAGCAGGATTGAAGACCAGTGAACGCCCCCGCC...TGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp GGTCAGGCTGGGTTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATAGGCGGCCTGTGCCTCTaGGGTCAGCTGCGTCTGCGA +
Preference number: 4 (lower is better)
Translates to: GQAGFDKIRTEMTTKVGIGGLCL*GQLRLR
Trigger: TCGCAGACGCAGCTGACCCCAGAGGCACAGGCCGCC...TATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588090.5
CDS-3UTR CCA 90 bp TGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTCTTCCTTCATCTGATGCCATaGCGGCTACGAGCGGGTTCC +
Preference number: 4 (lower is better)
Translates to: WLLRPAIEMALRGQMRLFLHLMP*RLRAGS
Trigger: GGAACCCGCTCGTAGCCGCCATGGCATCAGATGAAG...GAAGAGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586548.5
CDS-3UTR CCA 90 bp TATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGACAGACTCGGCTTTCTaGGTGCACACGTGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: YSNPTFTGLHIVVGKDWPTDSAF*VHTWPF
Trigger: AAAGGGCCACGTGTGCACCCAGAAAGCCGAGTCTGT...CGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586636.5
ENST00000591376.5
CDS-3UTR TCA 90 bp CCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGACGCAAGATCAGAACCGAAATaGCTACGAAAGTGGGAATAC +
Preference number: 4 (lower is better)
Translates to: PLRDVCTSTVGRTAQMDARSEPK*LRKWEY
Trigger: GTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCT...TGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp CGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCAGATCAGAACCGAAATaGCTACGAAAGTGGGAATAC +
Preference number: 4 (lower is better)
Translates to: RIRLSQGSTSLWARTGRPRSEPK*LRKWEY
Trigger: GTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCT...GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp ACATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCCGGTCAGGCTGGGTTTaGCAAGATCAGAACCGAAAT +
Preference number: 4 (lower is better)
Translates to: TSSRTSQGRLHVYCGAHSRSGWV*QDQNRN
Trigger: ATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCG...GCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp CGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGCGCCCTCGGAGTGTaGCTTACCGTAACTGTCATA +
Preference number: 4 (lower is better)
Translates to: RGPLFESDFHRAPHRCGQGALGV*LTVTVI
Trigger: TATGACAGTTACGGTAAGTCACACTCCGAGGGCGCC...TTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp AAAGAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTCTGGGCAAGCACAGTaGCAAGGTCTGAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: KERIHSPFDLREVSGAPTSGQAQ*QGLSVQ
Trigger: CTGGACACTCAGACCTTGTCACTGTGCTTGCCCAGA...AGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp TTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATTGGAAGGACGACACATGCACCTAGCTaGCTGCCCAGCGGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: LTFSEAPTIFKHTAIGRTTHAPS*LPSGPS
Trigger: CGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGT...CGTCCTTCCAATGGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp TATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCTCGTTGTGTGTAGCTaGGGACAAGAAGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: YSNPTFTGLHIVVGKDWPLVVCS*GQEAGT
Trigger: TGTGCCTGCTTCTTGTCCTCAGCTACACACAACGAG...CGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp CAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACCGGCCTCCTGCACCCTaGTACTCCTCCCGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QDQNRNDYESGNTRRCIYRPPAP*YSSRAS
Trigger: GGAGGCCCGGGAGGAGTATCAGGGTGCAGGAGGCCG...GTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586472.5
CDS-3UTR TCA 90 bp TACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATTGGAACCCCTGCTGGCCACTaGCCATGCGGGACCCGACCG +
Preference number: 4 (lower is better)
Translates to: YTLTFSEAPTIFKHTAIGTPAGH*PCGTRP
Trigger: CGGTCGGGTCCCGCATGGTCAGTGGCCAGCAGGGGT...TCCAATGGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588090.5
CDS-3UTR TCA 90 bp AAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCTCTGCCACAACAGGCTaGGCCGCCAGCCCCCATGCC +
Preference number: 4 (lower is better)
Translates to: KWEYKEVHLLHINVQRSSSATTG*AASPHA
Trigger: GGCATGGGGGCTGGCGGCTCAGCCTGTTGTGGCAGA...GGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591097.5
CDS-3UTR TCA 90 bp GGGTTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTTGGGTGCGGGCTCCGTaGGTGTCCGCAGCCATCCTG +
Preference number: 4 (lower is better)
Translates to: GFDKIRTEMTTKVGIQGGWVRAP*VSAAIL
Trigger: CAGGATGGCTGCGGACACTCACGGAGCCCGCACCCA...ACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586548.5
CDS-3UTR GCA 90 bp CACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGAGTTGGAAAACCTGCTCCAGCGACTaGTCATTGGTGTCAAAACTC +
Preference number: 4 (lower is better)
Translates to: HPPGSYHTTLRNVTRSWKTCSSD*SLVSKL
Trigger: GAGTTTTGACACCAATGAGCAGTCGCTGGAGCAGGT...TTTCCAACTCCGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp CTTGCGTCTCAGAGGGTTCTGTTGGGCGCACAACACTTCTGTCCTCCGAGGGCTTACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: LASQRVLLGAQHFCPPRAYFEKT*SSDCSL
Trigger: CAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTA...AGCCCTCGGAGGACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGACGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp CCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTCATCTACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: PALVPGEVPPGTVTPEVIYFEKT*SSDCSL
Trigger: CAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTA...GATGACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
CDS-3UTR GCA 90 bp CGTAACTGTCATAACTGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCTGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 4 (lower is better)
Translates to: RNCHNCLCRTRPSSGHCSWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...GCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACAGTTATGACAGTTACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591097.5
ENST00000591376.5
ENST00000593048.5
CDS-3UTR GCA 90 bp GGTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGA +
Preference number: 4 (lower is better)
Translates to: GAHVALYSNPTFTGLHIVGCLTT*LPGLLG
Trigger: TCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACC...AACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
CDS-3UTR GCA 90 bp TTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGA +
Preference number: 4 (lower is better)
Translates to: LFESDFHRAPHRCGQGLAGCLTT*LPGLLG
Trigger: TCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACC...GGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
CDS-3UTR GCA 90 bp GTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGA +
Preference number: 4 (lower is better)
Translates to: VHTWPFIRIRLSQGSTSLGCLTT*LPGLLG
Trigger: TCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACC...CAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
CDS-3UTR GCA 90 bp CTTGCCTGCCTGGTCTACTCGGATCTGCCGTCCATCTACAGACTTCCCATTCATGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGA +
Preference number: 4 (lower is better)
Translates to: LACLVYSDLPSIYRLPIHGCLTT*LPGLLG
Trigger: TCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACC...ATGAATGGGAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCAGGCAGGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
CDS-3UTR GCA 90 bp CTTCGTAAAGCCAAAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACGGGCTCCAGGGCAGTTaGTGCCACACCCGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: LRKAKENCVQEFLSHCKYGLQGS*CHTRRG
Trigger: ACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCC...GTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp CCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGACGCAGAATTCCTCAGCCACTaGAAATACAACATCGATGGA +
Preference number: 4 (lower is better)
Translates to: PLRDVCTSTVGRTAQMDAEFLSH*KYNIDG
Trigger: TCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTC...TGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp CCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTCTTCTGGGCAAGCACAGCCCTCGCTCTCCCTTaGCTTTTTGGTCAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: PAIEMALRGQMRLFWASTALALP*LFGQSH
Trigger: ATGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGC...TGTGCTTGCCCAGAAGAGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR GCA 90 bp GAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTCAGCCCTCGCTCTCCCTTaGCTTTTTGGTCAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: ERIHSPFDLREVSGAPTSALALP*LFGQSH
Trigger: ATGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGC...TGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp TATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGGCCCTCGCTCTCCCTTaGCTTTTTGGTCAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: YSNPTFTGLHIVVGKDWPALALP*LFGQSH
Trigger: ATGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGC...CGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp GCTATTTCCACATATGAGCTAGCCAAGGGAGCAGCTTGCGTCTCAGAGGGTTCTCTGTCCTCCGAGGGCTaGAGCTTCCATAGGCTAGCA +
Preference number: 4 (lower is better)
Translates to: AISTYELAKGAACVSEGSLSSEG*SFHRLA
Trigger: TGCTAGCCTATGGAAGCTGCAGCCCTCGGAGGACAG...AGAACCCTCTGAGACGCAAGCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp ATAACTGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGGAGTGTGTGGTGCAATaGAAGGGAATTGTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: ITVSVGPARAPVTVATTLECVVQ*KGIVRA
Trigger: TGCTCTGACAATTCCCTTGCATTGCACCACACACTC...CAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACAGTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp AAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGTATGGACGCGCTGCCCGTTaGGGACACCAGGGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: KTAYKNSSATANTTSMEYGRAAR*GHQGAL
Trigger: CAGCGCCCCCTGGTGTCCGCAACGGGCAGCGCGTCC...ATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588090.5
CDS-3UTR GCA 90 bp TACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAACCGACCGGGACGCGCTaGCCGTTGCGGACACCAGGG +
Preference number: 4 (lower is better)
Translates to: YESGNTRRCIYYTLTFSEPTGTR*PLRTPG
Trigger: CCCTGGTGTCCGCAACGGGCAGCGCGTCCCGGTCGG...TTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588090.5
CDS-3UTR CCA 90 bp ACATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCAATCCCCGAGATCTCTaGGTCTCCCTGTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: TSSRTSQGRLHVYCGAHSNPRDL*VSLSFT
Trigger: TGTGAAAGACAGGGAGACCCAGAGATCTCGGGGATT...GCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp AACTGTCATAACTGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACAATCCCCGAGATCTCTaGGTCTCCCTGTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: NCHNCLCRTRPSSGHCSHNPRDL*VSLSFT
Trigger: TGTGAAAGACAGGGAGACCCAGAGATCTCGGGGATT...GTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACAGTTATGACAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000590171.1
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
CDS-3UTR CCA 90 bp CCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: PFIRIRLSQGSTSLWARTDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...AGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
CDS-3UTR CCA 90 bp GGTCAGGCTGGGTTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: GQAGFDKIRTEMTTKVGIRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...TATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CCA 90 bp AGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: SGNTRRCIYYTLTFSEAPRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...GGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CCA 90 bp AAACACACAGCCATTGGAAGGACGATCTTGAGCAGGAAGGGTTTTTACTCGTTGCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: KHTAIGRTILSRKGFYSLRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...CAACGAGTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAATGGCTGTGTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CCA 90 bp CATTGGAAGGACGATCTTGAGCAGGAAGGGTTTTTACTCGTTGTGTGTAGCGTACGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: HWKDDLEQEGFLLVVCSVRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...TACGCTACACACAACGAGTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000591055.5
ENST00000593048.5
CDS-3UTR CCA 90 bp TTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATTGGAAGGACGCAGGCCACAGCAGCGTaGCGCCCTCGGAGTGTGACT +
Preference number: 4 (lower is better)
Translates to: LTFSEAPTIFKHTAIGRTQATAA*RPRSVT
Trigger: AGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTG...CGTCCTTCCAATGGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CCA 90 bp GGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGTCTCCCTTGCCTTTTTaGTCAGTCTCATTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: GKRLPPALVPGEVPPGTVSPLPF*SVSFGF
Trigger: AAAGCCAAATGAGACTGACCAAAAAGGCAAGGGAGA...CACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp TCCCTTGCCTTTTTGGTCAGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGACAGCCGAGGGAGGCTaGCCTGCGGCCACACATGCA +
Preference number: 4 (lower is better)
Translates to: SLAFLVSLIWLLRPAIEMTAEGG*PAATHA
Trigger: TGCATGTGTGGCCGCAGGCCAGCCTCCCTCGGCTGT...CATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAAAAGGCAAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CCA 90 bp TGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: WEYKEVHLLHINVQRSSHRGQAS*ASGCLQ
Trigger: CTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT...GTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp GCACAGTGTAAAGGCACCGAAGCAACAAGAGGCAGCTTCACCCCAGAGGCCAGAGCAGCAAGGAGTGTGTaGTGCAATGCAAGGGAATTG +
Preference number: 4 (lower is better)
Translates to: AQCKGTEATRGSFTPEARAARSV*CNAREL
Trigger: CAATTCCCTTGCATTGCACCACACACTCCTTGCTGC...TCTGGCCTCTGGGGTGAAGCTGCCTCTTGTTGCTTCGGTGCCTTTACACTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR CCA 90 bp AGTAACGAGGCCATCCCGGCGTCAGAAGCGGTCAGGCTGGGTTTGACAAGATCATCAACAAGAGGGATGTaGACACGAGCGGAAGGAGTT +
Preference number: 4 (lower is better)
Translates to: SNEAIPASEAVRLGLTRSSTRGM*TRAEGV
Trigger: AACTCCTTCCGCTCGTGTCCACATCCCTCTTGTTGA...TGATCTTGTCAAACCCAGCCTGACCGCTTCTGACGCCGGGATGGCCTCGTTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp GGTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTTGGGATGGAGCTATGTaGGCCAGTGTGGGCTCTAGA +
Preference number: 4 (lower is better)
Translates to: GAHVALYSNPTFTGLHIVWDGAM*ASVGSR
Trigger: TCTAGAGCCCACACTGGCCCACATAGCTCCATCCCA...AACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp CTTGCCTTTTTGGTCAGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTGGCGGGTCTGCACCTTaGCGCAGCTGGAGCCAGCTA +
Preference number: 4 (lower is better)
Translates to: LAFLVSLIWLLRPAIEMAGGSAP*RSWSQL
Trigger: TAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCC...AGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAAAAGGCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR CCA 90 bp GGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAGAAAGGCGCCCGCCATaGGGCCATAGGTGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: GNTRRCIYYTLTFSEAPTERRPP*GHRCGR
Trigger: TCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTC...TGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587896.6
CDS-3UTR CCA 90 bp GATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACGCTCCCCCAGGGACCTaGGACCCGGGACGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: DQNRNDYESGNTRRCIYYAPPGT*DPGRKL
Trigger: CAGCTTCCGTCCCGGGTCCCAGGTCCCTGGGGGAGC...GTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591097.5
CDS-3UTR TCA 90 bp CTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGATGCCATGGCGGCCACTaGGTCGGGCAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: LRKWEYKEVHLLHINVQRCHGGH*VGQVPD
Trigger: GTCAGGGACCTGCCCGACTCAGTGGCCGCCATGGCA...TCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR TCA 90 bp CACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGATCTGTCCGTACTTTaGGAAGACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: HTWPFIRIRLSQGSTSLWDLSVL*EDLLQR
Trigger: TCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATC...CCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR TCA 90 bp CTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTCTTCTGGGATCTGTCCGTACTTTaGGAAGACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: LLRPAIEMALRGQMRLFWDLSVL*EDLLQR
Trigger: TCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATC...CCAGAAGAGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp TTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGAGATCAGAACCGAAATaGCTACGAAAGTGGGAATAC +
Preference number: 4 (lower is better)
Translates to: LLPHPPGSYHTTLRNVTRRSEPK*LRKWEY
Trigger: GTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCT...CCGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp CATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTGGCGCCCTCGGAGTGTaGCTTACCGTAACTGTCATA +
Preference number: 4 (lower is better)
Translates to: HLAFASCDRNGSERTDAPGALGV*LTVTVI
Trigger: TATGACAGTTACGGTAAGTCACACTCCGAGGGCGCC...AGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp TGCTCAGCTTCCGACAAAGAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGTCTGGGCAAGCACAGTaGCAAGGTCTGAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: CSASDKERIHSPFDLREVSGQAQ*QGLSVQ
Trigger: CTGGACACTCAGACCTTGTCACTGTGCTTGCCCAGA...CACTTCTCTGAGATCGAACGGACTGTGAATCCGCTCTTTGTCGGAAGCTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp ACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATTGGAAGGACACATGCACCTAGCTaGCTGCCCAGCGGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: TLTFSEAPTIFKHTAIGRTHAPS*LPSGPS
Trigger: CGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGT...CCTTCCAATGGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp TTTCTGGGTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACCTCGTTGTGTGTAGCTaGGGACAAGAAGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: FLGAHVALYSNPTFTGLHLVVCS*GQEAGT
Trigger: TGTGCCTGCTTCTTGTCCTCAGCTACACACAACGAG...GTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCACCCAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp CTTCGTAAAGCCAAAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACCGGCTGGCCGTCTaGGGTCGCCCTGGGATGCCA +
Preference number: 4 (lower is better)
Translates to: LRKAKENCVQEFLSHCKYNRLAV*GRPGMP
Trigger: TGGCATCCCAGGGCGACCTCAGACGGCCAGCCGGTT...GTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp TTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 4 (lower is better)
Translates to: FIRIRLSQGSTSLWARTGSSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...GCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR TCA 90 bp TGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 4 (lower is better)
Translates to: CTRGPLFESDFHRAPHRCSSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...ACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR TCA 90 bp TTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATTGGAAGGACGTCCCAGTCGGCCTGGTaGTCTCCCTGCAGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: LTFSEAPTIFKHTAIGRTSQSAW*SPCSKP
Trigger: TGGCTTGCTGCAGGGAGATCACCAGGCCGACTGGGA...CGTCCTTCCAATGGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588030.5
CDS-3UTR GCA 90 bp GAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTCAACCTGCTCCAGCGACTaGTCATTGGTGTCAAAACTC +
Preference number: 4 (lower is better)
Translates to: ERIHSPFDLREVSGAPTSTCSSD*SLVSKL
Trigger: GAGTTTTGACACCAATGAGCAGTCGCTGGAGCAGGT...TGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp TTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGA +
Preference number: 4 (lower is better)
Translates to: FIRIRLSQGSTSLWARTGGCLTT*LPGLLG
Trigger: TCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACC...GCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
CDS-3UTR GCA 90 bp CCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGACGCAGGGAATACAAGGAGGTaGATTTACTACACATTAACG +
Preference number: 4 (lower is better)
Translates to: PLRDVCTSTVGRTAQMDAGNTRR*IYYTLT
Trigger: CGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC...TGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp GACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCCTCCAGGGCAGTTGCTaGCACACCCGCCGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: DYESGNTRRCIYYTLTFSLQGSC*HTRRGP
Trigger: AGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAG...GCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp AAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGCTCCAGGGCAGTTGCTaGCACACCCGCCGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: KKTAYKNSSATANTTSMELQGSC*HTRRGP
Trigger: AGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAG...CTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp AATTGTCAGAGCAAGGTTCATTTCACACGGTCTTTTAATCGGCTTCGTAAAGCCCTCCAGGGCAGTTGCTaGCACACCCGCCGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: NCQSKVHFTRSFNRLRKALQGSC*HTRRGP
Trigger: AGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAG...GGCTTTACGAAGCCGATTAAAAGACCGTGTGAAATGAACCTTGCTCTGACAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp GAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTCCAGGGCAGTTGCTaGCACACCCGCCGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: EYKEVHLLHINVQRSSHNLQGSC*HTRRGP
Trigger: AGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAG...ATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp AGCCAAAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGACTCCAGGGCAGTTGCTaGCACACCCGCCGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: SQRKLRTRIPQPLQIQHRLQGSC*HTRRGP
Trigger: AGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAG...TCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp TTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATTGGAAGGACGCCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: LTFSEAPTIFKHTAIGRTPLRDV*TSTVGR
Trigger: GCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG...CGTCCTTCCAATGGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp TGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACCCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: WEYKEVHLLHINVQRSSHPLRDV*TSTVGR
Trigger: GCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG...GTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp CAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCAACATCGATGGAGTATaGGTACGTCTTCCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: QASWASGCLQLLFQVKSLNIDGV*VRLPVK
Trigger: TTTTACTGGAAGACGTACGCATACTCCATCGATGTT...GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp CCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACAACATCGATGGAGTATaGGTACGTCTTCCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: PGQLLPHPPGSYHTTLRNNIDGV*VRLPVK
Trigger: TTTTACTGGAAGACGTACGCATACTCCATCGATGTT...GTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp CCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGAGTTGGGAATTCCTCAGCCACTaGAAATACAACATCGATGGA +
Preference number: 4 (lower is better)
Translates to: PHPPGSYHTTLRNVTRSWEFLSH*KYNIDG
Trigger: TCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTC...CCAACTCCGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp GCTATTTCCACATATGAGCTAGCCAAGGGAGCAGCTTGCGTCTCAGAGGGTTCTGTGTCCAGCCTAAAGTaGTTGGAGAGGGCACCAAGG +
Preference number: 4 (lower is better)
Translates to: AISTYELAKGAACVSEGSVSSLK*LERAPR
Trigger: CCTTGGTGCCCTCTCCAAGCACTTTAGGCTGGACAC...AGAACCCTCTGAGACGCAAGCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp AGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCGAGGTCGCCCTGGGATaGCACGTGCCTCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SGNTRRCIYYTLTFSEAPEVALG*HVPLLS
Trigger: AGAGAGCAGAGGCACGTGGCATCCCAGGGCGACCTC...GGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp GGTCAGGCTGGGTTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACCCTTCATCCACCCCTaGTGGCCACTGACCATGCGG +
Preference number: 4 (lower is better)
Translates to: GQAGFDKIRTEMTTKVGIPFIHP*WPLTMR
Trigger: CCGCATGGTCAGTGGCCAGCAGGGGTGGATGAAGGG...TATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588090.5
CDS-3UTR GCA 90 bp ACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTGCCTGGGTCCCCACCTaGCTCTGCTCCTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: TRRCIYYTLTFSEAPTIFAWVPT*LCSLPS
Trigger: GCTGGGCAAGGAGCAGAGGCAGGTGGGGACCCAGGC...AAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591097.5
CDS-3UTR CCA 90 bp AAAGAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTCCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: KERIHSPFDLREVSGAPTPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...AGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp GCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGCCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: AHVALYSNPTFTGLHIVVPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...CACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR CCA 90 bp GAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTCAAATCCCCGAGATCTCTaGGTCTCCCTGTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: ERIHSPFDLREVSGAPTSNPRDL*VSLSFT
Trigger: TGTGAAAGACAGGGAGACCCAGAGATCTCGGGGATT...TGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp AAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: KWEYKEVHLLHINVQRSSRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...GGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CCA 90 bp GTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGCAAATACAACATCGATaGAGTATGCGTACGTCTTCC +
Preference number: 4 (lower is better)
Translates to: VAATPAGVLPHYTQKRHTQIQHR*SMRTSS
Trigger: GGAAGACGTACGCATACTCCATCGATGTTGTATTTG...CGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp GCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACCAAATACAACATCGATaGAGTATGCGTACGTCTTCC +
Preference number: 4 (lower is better)
Translates to: AVAATPAGVLPHYTQKRHQIQHR*SMRTSS
Trigger: GGAAGACGTACGCATACTCCATCGATGTTGTATTTG...GTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp CAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGTTGGTCAGTCTCATTTaGCTTTTGCGTCCTGCGATA +
Preference number: 4 (lower is better)
Translates to: QEPLRDVCTSTVGRTAQMLVSLI*LLRPAI
Trigger: TATCGCAGGACGCAAAAGCCAAATGAGACTGACCAA...CATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp ACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATTGGAAGGACAGCCGAGGGAGGCTaGCCTGCGGCCACACATGCA +
Preference number: 4 (lower is better)
Translates to: TLTFSEAPTIFKHTAIGRTAEGG*PAATHA
Trigger: TGCATGTGTGGCCGCAGGCCAGCCTCCCTCGGCTGT...CCTTCCAATGGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CCA 90 bp TGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACGGACGGGTTAGCAGGTaGGTGCCCCATCCTCGAGAC +
Preference number: 4 (lower is better)
Translates to: WEYKEVHLLHINVQRSSHGRVSR*VPHPRD
Trigger: GTCTCGAGGATGGGGCACCCACCTGCTAACCCGTCC...GTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590347.5
ENST00000591055.5
CDS-3UTR CCA 90 bp CTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGTATGCGTGCACCTTGGCGCAGCTaGAGCCAGCTACCCGTATGG +
Preference number: 4 (lower is better)
Translates to: LRTRIPQPLQIQHRWSMRAPWRS*SQLPVW
Trigger: CCATACGGGTAGCTGGCTCCAGCTGCGCCAAGGTGC...ACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp TTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCAGGGGTCTCAGGCGGCTaGGACCCCTTCATCCACCCC +
Preference number: 4 (lower is better)
Translates to: FDKIRTEMTTKVGIQGGAGVSGG*DPFIHP
Trigger: GGGGTGGATGAAGGGGTCCCAGCCGCCTGAGACCCC...TGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588090.5
CDS-3UTR CCA 90 bp CCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGACAGACTCGGCTTTCTaGGTGCACACGTGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: PLFESDFHRAPHRCGQGLTDSAF*VHTWPF
Trigger: AAAGGGCCACGTGTGCACCCAGAAAGCCGAGTCTGT...CAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586636.5
ENST00000591376.5
3UTR CAA 72 bp GCCCTCGCTCTCCCTTGCCTTTTTGGTCAGTCTCATTaGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: ALALPCLFGQSH*AFASCDRNGSE
Trigger: CTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp CAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACAGTCGGGCAGGTCCCTaGCGCAAGCGGGAAGACAGC +
Preference number: 4 (lower is better)
Translates to: QDQNRNDYESGNTRRCIYSRAGP*RKREDS
Trigger: GCTGTCTTCCCGCTTGCGTCAGGGACCTGCCCGACT...GTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR TCA 90 bp TGCTCAGCTTCCGACAAAGAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGGATCTGTCCGTACTTTaGGAAGACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: CSASDKERIHSPFDLREVDLSVL*EDLLQR
Trigger: TCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATC...CACTTCTCTGAGATCGAACGGACTGTGAATCCGCTCTTTGTCGGAAGCTGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp TTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATTGGAAGGACGACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LTFSEAPTIFKHTAIGRTTGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...CGTCCTTCCAATGGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320936.9
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR TCA 90 bp CCTCAGCCACTGCAAATACAACATCGATGGAGTATGCGTACGTCTTCCAGTAAAACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: PQPLQIQHRWSMRTSSSKTGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...TTTACTGGAAGACGTACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320936.9
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
CDS-3UTR TCA 90 bp AGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SGNTRRCIYYTLTFSEAPTGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...GGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320936.9
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR TCA 90 bp CACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGAGTTGGAAATTGGAAGGACGATCTTaGGCAGGAAGGGTTTTTACT +
Preference number: 4 (lower is better)
Translates to: HPPGSYHTTLRNVTRSWKLEGRS*AGRVFT
Trigger: AGTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAA...TTTCCAACTCCGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp ATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACTTGGAAGGACGATCTTaGGCAGGAAGGGTTTTTACT +
Preference number: 4 (lower is better)
Translates to: IFKNLSGTSARLLWGAQHLEGRS*AGRVFT
Trigger: AGTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAA...GTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp AACGAGGCCATCCCGGCGTCAGAAGCGGTCAGGCTGGGTTTGACAAGATCAGAATTGGAAGGACGATCTTaGGCAGGAAGGGTTTTTACT +
Preference number: 4 (lower is better)
Translates to: NEAIPASEAVRLGLTRSELEGRS*AGRVFT
Trigger: AGTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAA...TTCTGATCTTGTCAAACCCAGCCTGACCGCTTCTGACGCCGGGATGGCCTCGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
CDS-3UTR TCA 90 bp GATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACGAGAGGGCACCAAGGTaGACCGAGCTCCCACCGCAG +
Preference number: 4 (lower is better)
Translates to: DQNRNDYESGNTRRCIYYERAPR*TELPPQ
Trigger: CTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTCTC...GTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp CTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAACACATGCACCTAGCTaGCTGCCCAGCGGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: LRKWEYKEVHLLHINVQRTHAPS*LPSGPS
Trigger: CGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGT...TCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp TTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCGGCTATTTCCACATATaGGCTAGCCAAGGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: FIRIRLSQGSTSLWARTGGYFHI*ASQGSS
Trigger: GCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGCC...GCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000444172.6
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
ENST00000592234.5
CDS-3UTR TCA 90 bp CTGAGAGGACAGATGCGCCTCTTCTGGGCAAGCACAGTGACAAGGTCTGAGTGTGCACATGACTTTCAGTaGGCTCTCAACAAGAGGGAT +
Preference number: 4 (lower is better)
Translates to: LRGQMRLFWASTVTRSECAHDFQ*ALNKRD
Trigger: ATCCCTCTTGTTGAGAGCTCACTGAAAGTCATGTGC...ACACTCAGACCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTGTCCTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR TCA 90 bp TGCTCAGCTTCCGACAAAGAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAAGGGATTTCATCTATaGGCCAGGCATGACTGGGCC +
Preference number: 4 (lower is better)
Translates to: CSASDKERIHSPFDLREVKGFHL*ARHDWA
Trigger: GGCCCAGTCATGCCTGGCTCATAGATGAAATCCCTT...CACTTCTCTGAGATCGAACGGACTGTGAATCCGCTCTTTGTCGGAAGCTGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp GGGTTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGTCTGCGAGCACCCGTaGCTCCCAGGTATCTCACCG +
Preference number: 4 (lower is better)
Translates to: GFDKIRTEMTTKVGIQGGVCEHP*LPGISP
Trigger: CGGTGAGATACCTGGGAGTCACGGGTGCTCGCAGAC...ACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588090.5
CDS-3UTR GCA 90 bp GTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 4 (lower is better)
Translates to: VHTWPFIRIRLSQGSTSLWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...CAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
CDS-3UTR GCA 90 bp CGAGGCCATCCCGGCGTCAGAAGCGGTCAGGCTGGGTTTGACAAGATCAGAACCGGGAATACAAGGAGGTaGATTTACTACACATTAACG +
Preference number: 4 (lower is better)
Translates to: RGHPGVRSGQAGFDKIRTGNTRR*IYYTLT
Trigger: CGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC...GGTTCTGATCTTGTCAAACCCAGCCTGACCGCTTCTGACGCCGGGATGGCCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
CDS-3UTR GCA 90 bp GGGTTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTCCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: GFDKIRTEMTTKVGIQGGPLRDV*TSTVGR
Trigger: GCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG...ACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp CGAGGCCATCCCGGCGTCAGAAGCGGTCAGGCTGGGTTTGACAAGATCAGAACCAACATCGATGGAGTATaGGTACGTCTTCCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: RGHPGVRSGQAGFDKIRTNIDGV*VRLPVK
Trigger: TTTTACTGGAAGACGTACGCATACTCCATCGATGTT...GGTTCTGATCTTGTCAAACCCAGCCTGACCGCTTCTGACGCCGGGATGGCCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp AGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGAATTCCTCAGCCACTaGAAATACAACATCGATGGA +
Preference number: 4 (lower is better)
Translates to: SCCHTRRGPTTLHSETSHEFLSH*KYNIDG
Trigger: TCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTC...GTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp CGAGGCCATCCCGGCGTCAGAAGCGGTCAGGCTGGGTTTGACAAGATCAGAACCAAAGCCAAAGAAAACTaGGTACAAGAATTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: RGHPGVRSGQAGFDKIRTKAKEN*VQEFLS
Trigger: GCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTT...GGTTCTGATCTTGTCAAACCCAGCCTGACCGCTTCTGACGCCGGGATGGCCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp TTGTGTGTAGCTGAGGACAAGAAGCAGGCACAGTGTAAAGGCACCGAAGCAACAGTGTCCAGCCTAAAGTaGTTGGAGAGGGCACCAAGG +
Preference number: 4 (lower is better)
Translates to: LCVAEDKKQAQCKGTEATVSSLK*LERAPR
Trigger: CCTTGGTGCCCTCTCCAAGCACTTTAGGCTGGACAC...TGTTGCTTCGGTGCCTTTACACTGTGCCTGCTTCTTGTCCTCAGCTACACACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR GCA 90 bp AGGACGATCTTGAGCAGGAAGGGTTTTTACTCGTTGTGTGTAGCTGAGGACAAGCTGTCCTCCGAGGGCTaGAGCTTCCATAGGCTAGCA +
Preference number: 4 (lower is better)
Translates to: RTILSRKGFYSLCVAEDKLSSEG*SFHRLA
Trigger: TGCTAGCCTATGGAAGCTGCAGCCCTCGGAGGACAG...CTTGTCCTCAGCTACACACAACGAGTAAAAACCCTTCCTGCTCAAGATCGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp ACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATTGGAAGGGGGTTAGCAGGTGGGTaGCCCATCCTCGAGACGGGA +
Preference number: 4 (lower is better)
Translates to: TLTFSEAPTIFKHTAIGRGLAGG*PILETG
Trigger: TCCCGTCTCGAGGATGGGGCACCCACCTGCTAACCC...CCTTCCAATGGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590347.5
ENST00000591055.5
CDS-3UTR CCA 90 bp GTCAGAAGCGGTCAGGCTGGGTTTGACAAGATCAGAACCGAAATGACTACGAAAGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: VRSGQAGFDKIRTEMTTKDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...TTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGCTTCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320936.9
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000591097.5
CDS-3UTR CCA 90 bp CAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACACGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: QNRNDYESGNTRRCIYYTRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...TGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CCA 90 bp AAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: KKTAYKNSSATANTTSMERSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...CTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp AATTGTCAGAGCAAGGTTCATTTCACACGGTCTTTTAATCGGCTTCGTAAAGCCCAGGCCACAGCAGCGTaGCGCCCTCGGAGTGTGACT +
Preference number: 4 (lower is better)
Translates to: NCQSKVHFTRSFNRLRKAQATAA*RPRSVT
Trigger: AGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTG...GGCTTTACGAAGCCGATTAAAAGACCGTGTGAAATGAACCTTGCTCTGACAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp ACATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCTTGGTCAGTCTCATTTaGCTTTTGCGTCCTGCGATA +
Preference number: 4 (lower is better)
Translates to: TSSRTSQGRLHVYCGAHSLVSLI*LLRPAI
Trigger: TATCGCAGGACGCAAAAGCCAAATGAGACTGACCAA...GCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp TCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCTATAGTAGTCTCTGGAGCTTGGTCAGTCTCATTTaGCTTTTGCGTCCTGCGATA +
Preference number: 4 (lower is better)
Translates to: SGHCSHHSDSGCYSSLWSLVSLI*LLRPAI
Trigger: TATCGCAGGACGCAAAAGCCAAATGAGACTGACCAA...GCTCCAGAGACTACTATAGCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590171.1
CDS-3UTR CCA 90 bp AATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCACAGCCGAGGGAGGCTaGCCTGCGGCCACACATGCA +
Preference number: 4 (lower is better)
Translates to: NTRRCIYYTLTFSEAPTITAEGG*PAATHA
Trigger: TGCATGTGTGGCCGCAGGCCAGCCTCCCTCGGCTGT...GATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CCA 90 bp GACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCACAGCCGAGGGAGGCTaGCCTGCGGCCACACATGCA +
Preference number: 4 (lower is better)
Translates to: DYESGNTRRCIYYTLTFSTAEGG*PAATHA
Trigger: TGCATGTGTGGCCGCAGGCCAGCCTCCCTCGGCTGT...GCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CCA 90 bp GATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: DQNRNDYESGNTRRCIYYRGQAS*ASGCLQ
Trigger: CTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT...GTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp AAAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGAGCCCGCACCTCACTaGCGAAGCGCCTCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: KENCVQEFLSHCKYNIDGEPAPH*RSASGD
Trigger: GTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTC...TCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR CCA 90 bp TACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTGCGTCTCCCCCATACTaGCAGGTCCTGAGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: YKEVHLLHINVQRSSHNLASPPY*QVLRGP
Trigger: TGGCCCCCTCAGGACCTGCCAGTATGGGGGAGACGC...AAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000588030.5
CDS-3UTR TCA 90 bp AGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACAGTCGGGCAGGTCCCTaGCGCAAGCGGGAAGACAGC +
Preference number: 4 (lower is better)
Translates to: RCIYYTLTFSEAPTIFKHSRAGP*RKREDS
Trigger: GCTGTCTTCCCGCTTGCGTCAGGGACCTGCCCGACT...GTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR TCA 90 bp AACTGTCATAACTGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACAGATCAGAACCGAAATaGCTACGAAAGTGGGAATAC +
Preference number: 4 (lower is better)
Translates to: NCHNCLCRTRPSSGHCSHRSEPK*LRKWEY
Trigger: GTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCT...GTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACAGTTATGACAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000587169.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR TCA 90 bp ATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCGAGAGGGCACCAAGGTaGACCGAGCTCCCACCGCAG +
Preference number: 4 (lower is better)
Translates to: IYYTLTFSEAPTIFKHTAERAPR*TELPPQ
Trigger: CTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTCTC...GGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp AGCGGTCAGGCTGGGTTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGACACAGTGACAAGGTCTaGGTGTCCAGCCTAAAGTGC +
Preference number: 4 (lower is better)
Translates to: SGQAGFDKIRTEMTTKVGHSDKV*VSSLKC
Trigger: GCACTTTAGGCTGGACACTCAGACCTTGTCACTGTG...TCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp AAAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAACACATGCACCTAGCTaGCTGCCCAGCGGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: KENCVQEFLSHCKYNIDGTHAPS*LPSGPS
Trigger: CGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGT...TCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp AGCGGTCAGGCTGGGTTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAGGCTATTTCCACATATaGGCTAGCCAAGGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SGQAGFDKIRTEMTTKVGGYFHI*ASQGSS
Trigger: GCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGCC...TCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp AGCCAAAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: SQRKLRTRIPQPLQIQHRSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...TCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp AGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACTCTCCCCGCTTCCACTaGGTCGGGCAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: RCIYYTLTFSEAPTIFKHSPRFH*VGQVPD
Trigger: GTCAGGGACCTGCCCGACTCAGTGGAAGCGGGGAGA...GTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585630.5
ENST00000589710.5
CDS-3UTR TCA 90 bp ATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATGGCGGCCACACACTaGGTCGGGCAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: IYYTLTFSEAPTIFKHTAMAATH*VGQVPD
Trigger: GTCAGGGACCTGCCCGACTCAGTGTGTGGCCGCCAT...GGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587323.5
CDS-3UTR GCA 90 bp CTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTCTTCTGGTACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: LLRPAIEMALRGQMRLFWYFEKT*SSDCSL
Trigger: CAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTA...CCAGAAGAGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR GCA 90 bp TTGAGCAGGAAGGGTTTTTACTCGTTGTGTGTAGCTGAGGACAAGAAGCAGGCAGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGA +
Preference number: 4 (lower is better)
Translates to: LSRKGFYSLCVAEDKKQAGCLTT*LPGLLG
Trigger: TCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACC...TGCCTGCTTCTTGTCCTCAGCTACACACAACGAGTAAAAACCCTTCCTGCTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000591097.5
CDS-3UTR GCA 90 bp CTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGACCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: LRKWEYKEVHLLHINVQRPLRDV*TSTVGR
Trigger: GCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG...TCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp CAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGAAAGCCAAAGAAAACTaGGTACAAGAATTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: QEPLRDVCTSTVGRTAQMKAKEN*VQEFLS
Trigger: GCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTT...CATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp TTCTGGGTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATTGGCTTTTGCGTCCTaGGATAGAAATGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: FWVHTWPFIRIRLSQGSTLAFAS*DRNGSE
Trigger: CTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAA...TGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCACCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp ACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTATGCACCTAGCTGACTaGCCAGCGGGCCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: TRRCIYYTLTFSEAPTIFMHLAD*PAGPRS
Trigger: AGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCAT...AAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR GCA 90 bp TTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCAATGCACCTAGCTGACTaGCCAGCGGGCCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: FDKIRTEMTTKVGIQGGAMHLAD*PAGPRS
Trigger: AGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCAT...TGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR GCA 90 bp TGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCGCACCGCAGCCCGTaGTCCAGGAGAGACTCGAGG +
Preference number: 4 (lower is better)
Translates to: CIYYTLTFSEAPTIFKHTAHRSP*SRRDSR
Trigger: CCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGC...TGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp TTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCACTGTCCCTGCTAAGCTaGCCGCACAGTCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: FDKIRTEMTTKVGIQGGALSLLS*PHSPAL
Trigger: GAGGGCTGGACTGTGCGGGCAGCTTAGCAGGGACAG...TGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp AGGACGATCTTGAGCAGGAAGGGTTTTTACTCGTTGTGTGTAGCTGAGGACAAGCGGGCCCCTTCAACCTaGCAAAGCAAAGCAGCGTTA +
Preference number: 4 (lower is better)
Translates to: RTILSRKGFYSLCVAEDKRAPST*QSKAAL
Trigger: TAACGCTGCTTTGCTTTGGCAGGTTGAAGGGGCCCG...CTTGTCCTCAGCTACACACAACGAGTAAAAACCCTTCCTGCTCAAGATCGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR CCA 90 bp AGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: SGNTRRCIYYTLTFSEAPDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...GGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320936.9
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CCA 90 bp GGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: GNTRRCIYYTLTFSEAPTDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...TGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320936.9
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CCA 90 bp TACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATTCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: YYTLTFSEAPTIFKHTAIRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...AATGGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CCA 90 bp AAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: KIRTEMTTKVGIQGGAFTRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...AGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CCA 90 bp AACGAGGCCATCCCGGCGTCAGAAGCGGTCAGGCTGGGTTTGACAAGATCAGAACAAATACAACATCGATaGAGTATGCGTACGTCTTCC +
Preference number: 4 (lower is better)
Translates to: NEAIPASEAVRLGLTRSEQIQHR*SMRTSS
Trigger: GGAAGACGTACGCATACTCCATCGATGTTGTATTTG...TTCTGATCTTGTCAAACCCAGCCTGACCGCTTCTGACGCCGGGATGGCCTCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp GCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTCTTCTGGGCAAGTCTCCCTTGCCTTTTTaGTCAGTCTCATTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: ASCDRNGSERTDAPLLGKSPLPF*SVSFGF
Trigger: AAAGCCAAATGAGACTGACCAAAAAGGCAAGGGAGA...CTTGCCCAGAAGAGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CCA 90 bp CAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACACACAGTCCAGCCCTCTaGCCACCACTGCCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: QNRNDYESGNTRRCIYYTHSPAL*PPLPEA
Trigger: GGCTTCTGGCAGTGGTGGCCAGAGGGCTGGACTGTG...TGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp ATAAATAAACATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCTTCATCTGATGCCATaGCGGCCTGTGGCAGACACC +
Preference number: 4 (lower is better)
Translates to: INKHLQEPLRDVCTSTVGLHLMP*RPVADT
Trigger: GGTGTCTGCCACAGGCCGCCATGGCATCAGATGAAG...CCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTATTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589710.5
CDS-3UTR TCA 90 bp GTCAGAAGCGGTCAGGCTGGGTTTGACAAGATCAGAACCGAAATGACTACGAAAGATCTGTCCGTACTTTaGGAAGACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: VRSGQAGFDKIRTEMTTKDLSVL*EDLLQR
Trigger: TCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATC...TTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGCTTCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
CDS-3UTR TCA 90 bp GAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: EYKEVHLLHINVQRSSHNTGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...ATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320936.9
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR TCA 90 bp AGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCTCGTTGTGTGTAGCTaGGGACAAGAAGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: SLIWLLRPAIEMALRGQMLVVCS*GQEAGT
Trigger: TGTGCCTGCTTCTTGTCCTCAGCTACACACAACGAG...CATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp TGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACATCTCCCCGCTTCCACTaGGTCGGGCAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: CIYYTLTFSEAPTIFKHTSPRFH*VGQVPD
Trigger: GTCAGGGACCTGCCCGACTCAGTGGAAGCGGGGAGA...TGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585630.5
ENST00000589710.5
CDS-3UTR GCA 90 bp TTGTGTGTAGCTGAGGACAAGAAGCAGGCACAGTGTAAAGGCACCGAAGCAACATGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 4 (lower is better)
Translates to: LCVAEDKKQAQCKGTEATWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...TGTTGCTTCGGTGCCTTTACACTGTGCCTGCTTCTTGTCCTCAGCTACACACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000591097.5
CDS-3UTR GCA 90 bp TGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGA +
Preference number: 4 (lower is better)
Translates to: WEYKEVHLLHINVQRSSHGCLTT*LPGLLG
Trigger: TCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACC...GTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320936.9
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR GCA 90 bp GGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGA +
Preference number: 4 (lower is better)
Translates to: GNTRRCIYYTLTFSEAPTGCLTT*LPGLLG
Trigger: TCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACC...TGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320936.9
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR GCA 90 bp GCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCTATAGTAGTCTCTGGAGGGAATACAAGGAGGTaGATTTACTACACATTAACG +
Preference number: 4 (lower is better)
Translates to: APVTVATTLTPAAIVVSGGNTRR*IYYTLT
Trigger: CGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC...TCCAGAGACTACTATAGCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000593048.5
CDS-3UTR GCA 90 bp TACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAACCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: YESGNTRRCIYYTLTFSEPLRDV*TSTVGR
Trigger: GCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG...TTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp AACGAGGCCATCCCGGCGTCAGAAGCGGTCAGGCTGGGTTTGACAAGATCAGAAAAAGCCAAAGAAAACTaGGTACAAGAATTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: NEAIPASEAVRLGLTRSEKAKEN*VQEFLS
Trigger: GCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTT...TTCTGATCTTGTCAAACCCAGCCTGACCGCTTCTGACGCCGGGATGGCCTCGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp ACATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCAAAGCCAAAGAAAACTaGGTACAAGAATTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: TSSRTSQGRLHVYCGAHSKAKEN*VQEFLS
Trigger: GCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTT...GCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp TGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACGTGTCCAGCCTAAAGTaGTTGGAGAGGGCACCAAGG +
Preference number: 4 (lower is better)
Translates to: WEYKEVHLLHINVQRSSHVSSLK*LERAPR
Trigger: CCTTGGTGCCCTCTCCAAGCACTTTAGGCTGGACAC...GTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR GCA 90 bp TTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTCTTTTGGCTTTTGCGTCCTaGGATAGAAATGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LAFASCDRNGSERTDAPLLAFAS*DRNGSE
Trigger: CTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAA...AAGAGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR GCA 90 bp AAAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAATGCACCTAGCTGACTaGCCAGCGGGCCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: KENCVQEFLSHCKYNIDGMHLAD*PAGPRS
Trigger: AGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCAT...TCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp AGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAAGGGTTAGCAGGTGGGTaGCCCATCCTCGAGACGGGA +
Preference number: 4 (lower is better)
Translates to: RRCIYYTLTFSEAPTIFKGLAGG*PILETG
Trigger: TCCCGTCTCGAGGATGGGGCACCCACCTGCTAACCC...TTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590347.5
ENST00000591055.5
CDS-3UTR GCA 90 bp ACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTCAGGTCAGCGTCAGGTaGACGTCCACTGTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: TRRCIYYTLTFSEAPTIFQVSVR*TSTVPA
Trigger: AGCAGGGACAGTGGACGTGCACCTGACGCTGACCTG...AAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp CAGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATTCACAACCACCACTGTaGAGGGGAGAGAGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: QSHLAFASCDRNGSERTDSQPPL*RGERSS
Trigger: TGAAGACCTCTCTCCCCTGCACAGTGGTGGTTGTGA...ATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
CDS-3UTR CCA 90 bp AGGACGATCTTGAGCAGGAAGGGTTTTTACTCGTTGTGTGTAGCTGAGGACAAGCCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: RTILSRKGFYSLCVAEDKPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...CTTGTCCTCAGCTACACACAACGAGTAAAAACCCTTCCTGCTCAAGATCGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CCA 90 bp TCAGCTTCCGACAAAGAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTAATCCCCGAGATCTCTaGGTCTCCCTGTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: SASDKERIHSPFDLREVSNPRDL*VSLSFT
Trigger: TGTGAAAGACAGGGAGACCCAGAGATCTCGGGGATT...ACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTCTTTGTCGGAAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp GCTGGGTTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: AGFDKIRTEMTTKVGIQGDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...TCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CCA 90 bp ACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATTGGAAGGGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: TLTFSEAPTIFKHTAIGRDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...CCTTCCAATGGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320936.9
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CCA 90 bp AAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: KWEYKEVHLLHINVQRSSDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...GGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000320936.9
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CCA 90 bp TGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACACGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: CIYYTLTFSEAPTIFKHTRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...TGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CCA 90 bp CGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCTGCACGTCTACTGTaGGGCGCACAGCACAGATGG +
Preference number: 4 (lower is better)
Translates to: RKWEYKEVHLLHINVQRSSARLL*GAQHRW
Trigger: CCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGA...GCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp ACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATTGGAAGGTCTGCACGTCTACTGTaGGGCGCACAGCACAGATGG +
Preference number: 4 (lower is better)
Translates to: TLTFSEAPTIFKHTAIGRSARLL*GAQHRW
Trigger: CCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGA...CCTTCCAATGGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp CTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGTATGCGTCAGATGCGCCTCTTCTaGGCAAGCACAGTGACAAGG +
Preference number: 4 (lower is better)
Translates to: LRTRIPQPLQIQHRWSMRQMRLF*ASTVTR
Trigger: CCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTG...ACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp TGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACCAGATGCGCCTCTTCTaGGCAAGCACAGTGACAAGG +
Preference number: 4 (lower is better)
Translates to: WEYKEVHLLHINVQRSSHQMRLF*ASTVTR
Trigger: CCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTG...GTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CCA 90 bp AAAAAGGACAATATAAATAAACATCTTCAAGAACCTCTCAGGGACGTCTGCACGACAGCCGAGGGAGGCTaGCCTGCGGCCACACATGCA +
Preference number: 4 (lower is better)
Translates to: KKDNINKHLQEPLRDVCTTAEGG*PAATHA
Trigger: TGCATGTGTGGCCGCAGGCCAGCCTCCCTCGGCTGT...CGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTATTTATATTGTCCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp TGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGGCTCCACATCGTTGTaGGCAAGGACTGGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: CIYYTLTFSEAPTIFKHTGSTSL*ARTGRP
Trigger: GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCC...TGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp CTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGTATGCGTGCTACCCGTATGGGATaGAGCTATGTGGGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: LRTRIPQPLQIQHRWSMRATRMG*SYVGQC
Trigger: ACACTGGCCCACATAGCTCCATCCCATACGGGTAGC...ACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp AAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCTTCATCTGATGCCATaGCGGCCTGTGGCAGACACC +
Preference number: 4 (lower is better)
Translates to: KWEYKEVHLLHINVQRSSLHLMP*RPVADT
Trigger: GGTGTCTGCCACAGGCCGCCATGGCATCAGATGAAG...GGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585630.5
ENST00000589710.5
CDS-3UTR CCA 90 bp GACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCCTTCATCTGATGCCATaGCGGCCTGCCAGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: DYESGNTRRCIYYTLTFSLHLMP*RPASPR
Trigger: CCTTGGGCTGGCAGGCCGCCATGGCATCAGATGAAG...GCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588030.5
3UTR CAA 72 bp GGAAGGACGATCTTGAGCAGGAAGGGTTTTTACTCGTaGTGTGTAGCTGAGGACAAGAAGCAGGCACAGTGT +
Preference number: 4 (lower is better)
Translates to: GRTILSRKGFYS*CVAEDKKQAQC
Trigger: ACACTGTGCCTGCTTCTTGTCCTCAGCTACACACAACGAGTAAAAACCCTTCCTGCTCAAGATCGTCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp CTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGTATGCGTGATCTGTCCGTACTTTaGGAAGACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: LRTRIPQPLQIQHRWSMRDLSVL*EDLLQR
Trigger: TCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATC...ACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp AGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCGATCTGTCCGTACTTTaGGAAGACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: SGNTRRCIYYTLTFSEAPDLSVL*EDLLQR
Trigger: TCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATC...GGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR TCA 90 bp TCTTTTAATCGGCTTCGTAAAGCCAAAGAAAACTGCGTACAAGAATTCCTCAGCACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SFNRLRKAKENCVQEFLSTGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...GCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAGCCGATTAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320936.9
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
CDS-3UTR TCA 90 bp TTCCTCAGCCACTGCAAATACAACATCGATGGAGTATGCGTACGTCTTCCAGTATCGATCTCAGAGAAGTaGGTGGGGCACCCACTTCAT +
Preference number: 4 (lower is better)
Translates to: FLSHCKYNIDGVCVRLPVSISEK*VGHPLH
Trigger: ATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGA...TACTGGAAGACGTACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp CCTCAGCCACTGCAAATACAACATCGATGGAGTATGCGTACGTCTTCCAGTAAATCGATCTCAGAGAAGTaGGTGGGGCACCCACTTCAT +
Preference number: 4 (lower is better)
Translates to: PQPLQIQHRWSMRTSSSKSISEK*VGHPLH
Trigger: ATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGA...TTTACTGGAAGACGTACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp GGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACACACAGTGACAAGGTCTaGGTGTCCAGCCTAAAGTGC +
Preference number: 4 (lower is better)
Translates to: GNTRRCIYYTLTFSEAPTHSDKV*VSSLKC
Trigger: GCACTTTAGGCTGGACACTCAGACCTTGTCACTGTG...TGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp TTTTTGGTCAGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGATCTGGGCAAGCACAGTaGCAAGGTCTGAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: FLVSLIWLLRPAIEMALRSGQAQ*QGLSVQ
Trigger: CTGGACACTCAGACCTTGTCACTGTGCTTGCCCAGA...TCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp CGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCTGGGCAAGCACAGTaGCAAGGTCTGAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: RKWEYKEVHLLHINVQRSSGQAQ*QGLSVQ
Trigger: CTGGACACTCAGACCTTGTCACTGTGCTTGCCCAGA...GCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp AGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCCTCGTTGTGTGTAGCTaGGGACAAGAAGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: SGNTRRCIYYTLTFSEAPLVVCS*GQEAGT
Trigger: TGTGCCTGCTTCTTGTCCTCAGCTACACACAACGAG...GGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp TACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGGCCTGCTTCTAGACTaGGGCAGTCCAGGTCAGCGT +
Preference number: 4 (lower is better)
Translates to: YESGNTRRCIYYTLTFSEGLLLD*GSPGQR
Trigger: ACGCTGACCTGGACTGCCTCAGTCTAGAAGCAGGCC...TTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp AGCGGTCAGGCTGGGTTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAGCACATGACTTTCAGTaGGCTCTCAACAAGAGGGAT +
Preference number: 4 (lower is better)
Translates to: SGQAGFDKIRTEMTTKVGAHDFQ*ALNKRD
Trigger: ATCCCTCTTGTTGAGAGCTCACTGAAAGTCATGTGC...TCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp TTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCACAAGCCACACAGATGTaGGACTCCAGGAAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: FDKIRTEMTTKVGIQGGAQATQM*DSRKGS
Trigger: GCTCCCCTTCCTGGAGTCTCACATCTGTGTGGCTTG...TGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588030.5
CDS-3UTR GCA 90 bp TCAGCTTCCGACAAAGAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTTACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: SASDKERIHSPFDLREVSYFEKT*SSDCSL
Trigger: CAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTA...ACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTCTTTGTCGGAAGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp AAAAAGGACAATATAAATAAACATCTTCAAGAACCTCTCAGGGACGTCTGCACGCCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: KKDNINKHLQEPLRDVCTPLRDV*TSTVGR
Trigger: GCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG...CGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTATTTATATTGTCCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000588344.2
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp TTTCTGGGTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACGAATTCCTCAGCCACTaGAAATACAACATCGATGGA +
Preference number: 4 (lower is better)
Translates to: FLGAHVALYSNPTFTGLHEFLSH*KYNIDG
Trigger: TCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTC...GTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCACCCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp AAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCGTGTCCAGCCTAAAGTaGTTGGAGAGGGCACCAAGG +
Preference number: 4 (lower is better)
Translates to: KWEYKEVHLLHINVQRSSVSSLK*LERAPR
Trigger: CCTTGGTGCCCTCTCCAAGCACTTTAGGCTGGACAC...GGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR GCA 90 bp GGTCAGGCTGGGTTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATAGCCCTCGCTCTCCCTTaGCTTTTTGGTCAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: GQAGFDKIRTEMTTKVGIALALP*LFGQSH
Trigger: ATGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGC...TATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR GCA 90 bp TTCCTCAGCCACTGCAAATACAACATCGATGGAGTATGCGTACGTCTTCCAGTAGCCCTCGCTCTCCCTTaGCTTTTTGGTCAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: FLSHCKYNIDGVCVRLPVALALP*LFGQSH
Trigger: ATGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGC...TACTGGAAGACGTACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp AAAAAGGACAATATAAATAAACATCTTCAAGAACCTCTCAGGGACGTCTGCACGCTGCTCAGGTCTGGCTaGAGGAGCCCGCAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: KKDNINKHLQEPLRDVCTLLRSG*RSPQQG
Trigger: TCCTTGCTGCGGGCTCCTGCAGCCAGACCTGAGCAG...CGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTATTTATATTGTCCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp AACCTGCCAAAGCAAAGCAGCGTTACTCCCAACGTCCTCCACAGGGCTCACAGCACTGGTCTTCAATCCTaGTTAAGGGATTTCATCTAT +
Preference number: 4 (lower is better)
Translates to: NLPKQSSVTPNVLHRAHSTGLQS*LRDFIY
Trigger: ATAGATGAAATCCCTTAAGCAGGATTGAAGACCAGT...GCTGTGAGCCCTGTGGAGGACGTTGGGAGTAACGCTGCTTTGCTTTGGCAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp GGTCAGGCTGGGTTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: GQAGFDKIRTEMTTKVGIPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...TATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CCA 90 bp TCCCTTGCCTTTTTGGTCAGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGCCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: SLAFLVSLIWLLRPAIEMPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...CATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAAAAGGCAAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CCA 90 bp AGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCCCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: SGNTRRCIYYTLTFSEAPPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...GGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CCA 90 bp TTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCAGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: FDKIRTEMTTKVGIQGGADDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...TGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000320936.9
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CCA 90 bp ACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: TRRCIYYTLTFSEAPTIFDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...AAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320936.9
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CCA 90 bp AAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: KWEYKEVHLLHINVQRSSCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...GGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CCA 90 bp CTTCGTAAAGCCAAAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACTCTGCACGTCTACTGTaGGGCGCACAGCACAGATGG +
Preference number: 4 (lower is better)
Translates to: LRKAKENCVQEFLSHCKYSARLL*GAQHRW
Trigger: CCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGA...GTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp AAAGAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTCTCCCTTGCCTTTTTaGTCAGTCTCATTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: KERIHSPFDLREVSGAPTSPLPF*SVSFGF
Trigger: AAAGCCAAATGAGACTGACCAAAAAGGCAAGGGAGA...AGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp AAAAAGGACAATATAAATAAACATCTTCAAGAACCTCTCAGGGACGTCTGCACGGGACGGGTTAGCAGGTaGGTGCCCCATCCTCGAGAC +
Preference number: 4 (lower is better)
Translates to: KKDNINKHLQEPLRDVCTGRVSR*VPHPRD
Trigger: GTCTCGAGGATGGGGCACCCACCTGCTAACCCGTCC...CGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTATTTATATTGTCCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590347.5
CDS-3UTR CCA 90 bp AGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACGTCCATCTACAGACTaGAGACAGAGGGCGGGACGG +
Preference number: 4 (lower is better)
Translates to: RRCIYYTLTFSEAPTIFKRPSTD*RQRAGR
Trigger: CCGTCCCGCCCTCTGTCTCCAGTCTGTAGATGGACG...TTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590347.5
ENST00000591055.5
CDS-3UTR CCA 90 bp AGCCAAAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGAAGCCAGCTACCCGTATaGGATGGAGCTATGTGGGCC +
Preference number: 4 (lower is better)
Translates to: SQRKLRTRIPQPLQIQHRSQLPV*DGAMWA
Trigger: GGCCCACATAGCTCCATCCCATACGGGTAGCTGGCT...TCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp GTCAGAAGCGGTCAGGCTGGGTTTGACAAGATCAGAACCGAAATGACTACGAAATTCTGGGTGCACACGTaGCCCTTTATTCGAATCCGA +
Preference number: 4 (lower is better)
Translates to: VRSGQAGFDKIRTEMTTKFWVHT*PFIRIR
Trigger: TCGGATTCGAATAAAGGGCCACGTGTGCACCCAGAA...TTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGCTTCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp AAAAAGGACAATATAAATAAACATCTTCAAGAACCTCTCAGGGACGTCTGCACGGTGGGTGTGGCAGAGTaGGAGTCCCCGACTCCTGTG +
Preference number: 4 (lower is better)
Translates to: KKDNINKHLQEPLRDVCTVGVAE*ESPTPV
Trigger: CACAGGAGTCGGGGACTCCCACTCTGCCACACCCAC...CGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTATTTATATTGTCCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588030.5
CDS-3UTR CCA 90 bp AAAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGATTCATCCACCCCTGCTaGCCACTGACCATGCGGGAC +
Preference number: 4 (lower is better)
Translates to: KENCVQEFLSHCKYNIDGFIHPC*PLTMRD
Trigger: GTCCCGCATGGTCAGTGGCCAGCAGGGGTGGATGAA...TCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588090.5
CDS-3UTR CCA 90 bp AAAAAGGACAATATAAATAAACATCTTCAAGAACCTCTCAGGGACGTCTGCACGGGCGCACAGCACAGATaGACGCAGGGGCTGGTCTAC +
Preference number: 4 (lower is better)
Translates to: KKDNINKHLQEPLRDVCTGAQHR*TQGLVY
Trigger: GTAGACCAGCCCCTGCGTCCATCTGTGCTGTGCGCC...CGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTATTTATATTGTCCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588344.2
CDS-3UTR TCA 90 bp GCTGGGTTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGATCTGTCCGTACTTTaGGAAGACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: AGFDKIRTEMTTKVGIQGDLSVL*EDLLQR
Trigger: TCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATC...TCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR TCA 90 bp ACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATTGGAAGGGATCTGTCCGTACTTTaGGAAGACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: TLTFSEAPTIFKHTAIGRDLSVL*EDLLQR
Trigger: TCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATC...CCTTCCAATGGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR TCA 90 bp GGGTTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGATCTGTCCGTACTTTaGGAAGACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: GFDKIRTEMTTKVGIQGGDLSVL*EDLLQR
Trigger: TCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATC...ACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR TCA 90 bp AGCGGTCAGGCTGGGTTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGATTGGAAGGACGATCTTaGGCAGGAAGGGTTTTTACT +
Preference number: 4 (lower is better)
Translates to: SGQAGFDKIRTEMTTKVGLEGRS*AGRVFT
Trigger: AGTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAA...TCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR TCA 90 bp CATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTAGATCAGAACCGAAATaGCTACGAAAGTGGGAATAC +
Preference number: 4 (lower is better)
Translates to: HLAFASCDRNGSERTDAPRSEPK*LRKWEY
Trigger: GTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCT...AGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp ATAAATAAACATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGGTCAGGCTGGGTTTaGCAAGATCAGAACCGAAAT +
Preference number: 4 (lower is better)
Translates to: INKHLQEPLRDVCTSTVGRSGWV*QDQNRN
Trigger: ATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCG...CCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp ACACGAGCGGAAGGAGTTACCTCGAATTACAGGGCTATTTCCACATATGAGCTACGGTCAGGCTGGGTTTaGCAAGATCAGAACCGAAAT +
Preference number: 4 (lower is better)
Translates to: TRAEGVTSNYRAISTYELRSGWV*QDQNRN
Trigger: ATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCG...TAGCTCATATGTGGAAATAGCCCTGTAATTCGAGGTAACTCCTTCCGCTCGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp CAATGCAAGGGAATTGTCAGAGCAAGGTTCATTTCACACGGTCTTTTAATCGGCCACAGTGACAAGGTCTaGGTGTCCAGCCTAAAGTGC +
Preference number: 4 (lower is better)
Translates to: QCKGIVRARFISHGLLIGHSDKV*VSSLKC
Trigger: GCACTTTAGGCTGGACACTCAGACCTTGTCACTGTG...GCCGATTAAAAGACCGTGTGAAATGAACCTTGCTCTGACAATTCCCTTGCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp GATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACTCTGGGCAAGCACAGTaGCAAGGTCTGAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: DQNRNDYESGNTRRCIYYSGQAQ*QGLSVQ
Trigger: CTGGACACTCAGACCTTGTCACTGTGCTTGCCCAGA...GTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp CAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACAAGTTTGCCTTCATCTaGTGCCATGGCGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: QDQNRNDYESGNTRRCIYKFAFI*CHGGLW
Trigger: CCACAGGCCGCCATGGCATCAGATGAAGGCAAACTT...GTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585630.5
ENST00000589710.5
CDS-3UTR TCA 90 bp GATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACAAGTTTGCCTTCATCTaGTGCCATGGCGGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: DQNRNDYESGNTRRCIYYKFAFI*CHGGLC
Trigger: GCACAGGCCGCCATGGCATCAGATGAAGGCAAACTT...GTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588090.5
CDS-3UTR GCA 90 bp AGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACCTGCTCCAGCGACTaGTCATTGGTGTCAAAACTC +
Preference number: 4 (lower is better)
Translates to: SGNTRRCIYYTLTFSEAPTCSSD*SLVSKL
Trigger: GAGTTTTGACACCAATGAGCAGTCGCTGGAGCAGGT...GGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR GCA 90 bp TTGAGCAGGAAGGGTTTTTACTCGTTGTGTGTAGCTGAGGACAAGAAGCAGGCATACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: LSRKGFYSLCVAEDKKQAYFEKT*SSDCSL
Trigger: CAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTA...TGCCTGCTTCTTGTCCTCAGCTACACACAACGAGTAAAAACCCTTCCTGCTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR GCA 90 bp CTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGTATGCGTTGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 4 (lower is better)
Translates to: LRTRIPQPLQIQHRWSMRWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...ACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
CDS-3UTR GCA 90 bp GGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGAGGGAATACAAGGAGGTaGATTTACTACACATTAACG +
Preference number: 4 (lower is better)
Translates to: GPLFESDFHRAPHRCGQGGNTRR*IYYTLT
Trigger: CGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC...TCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp AAAGAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTAAAGCCAAAGAAAACTaGGTACAAGAATTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: KERIHSPFDLREVSGAPTKAKEN*VQEFLS
Trigger: GCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTT...AGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp TACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATTGGAGTGTCCAGCCTAAAGTaGTTGGAGAGGGCACCAAGG +
Preference number: 4 (lower is better)
Translates to: YTLTFSEAPTIFKHTAIGVSSLK*LERAPR
Trigger: CCTTGGTGCCCTCTCCAAGCACTTTAGGCTGGACAC...TCCAATGGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR GCA 90 bp CGGTCTTTTAATCGGCTTCGTAAAGCCAAAGAAAACTGCGTACAAGAATTCCTCGTGTCCAGCCTAAAGTaGTTGGAGAGGGCACCAAGG +
Preference number: 4 (lower is better)
Translates to: RSFNRLRKAKENCVQEFLVSSLK*LERAPR
Trigger: CCTTGGTGCCCTCTCCAAGCACTTTAGGCTGGACAC...GAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAGCCGATTAAAAGACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp CAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACGTGTCCAGCCTAAAGTaGTTGGAGAGGGCACCAAGG +
Preference number: 4 (lower is better)
Translates to: QDQNRNDYESGNTRRCIYVSSLK*LERAPR
Trigger: CCTTGGTGCCCTCTCCAAGCACTTTAGGCTGGACAC...GTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CCA 90 bp AAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: KWEYKEVHLLHINVQRSSPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...GGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CCA 90 bp CTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGTATGCGTAATCCCCGAGATCTCTaGGTCTCCCTGTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: LRTRIPQPLQIQHRWSMRNPRDL*VSLSFT
Trigger: TGTGAAAGACAGGGAGACCCAGAGATCTCGGGGATT...ACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp CTTTTTGGTCAGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAATCCCCGAGATCTCTaGGTCTCCCTGTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: LFGQSHLAFASCDRNGSENPRDL*VSLSFT
Trigger: TGTGAAAGACAGGGAGACCCAGAGATCTCGGGGATT...CTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CCA 90 bp TTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATTGGAAGGACGAATCCCCGAGATCTCTaGGTCTCCCTGTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: LTFSEAPTIFKHTAIGRTNPRDL*VSLSFT
Trigger: TGTGAAAGACAGGGAGACCCAGAGATCTCGGGGATT...CGTCCTTCCAATGGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
CDS-3UTR CCA 90 bp GATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: DQNRNDYESGNTRRCIYYCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...GTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CCA 90 bp ACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: TRRCIYYTLTFSEAPTIFCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...AAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CCA 90 bp TACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: YKEVHLLHINVQRSSHNLCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...AAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CCA 90 bp CAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: QNRNDYESGNTRRCIYYTCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...TGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CCA 90 bp CTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGATGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: LRKWEYKEVHLLHINVQRCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...TCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CCA 90 bp TACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATTTCTGCACGTCTACTGTaGGGCGCACAGCACAGATGG +
Preference number: 4 (lower is better)
Translates to: YYTLTFSEAPTIFKHTAISARLL*GAQHRW
Trigger: CCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGA...AATGGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp ATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCTCTGCACGTCTACTGTaGGGCGCACAGCACAGATGG +
Preference number: 4 (lower is better)
Translates to: IYYTLTFSEAPTIFKHTASARLL*GAQHRW
Trigger: CCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGA...GGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp CATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTCAAATACAACATCGATaGAGTATGCGTACGTCTTCC +
Preference number: 4 (lower is better)
Translates to: HLAFASCDRNGSERTDAPQIQHR*SMRTSS
Trigger: GGAAGACGTACGCATACTCCATCGATGTTGTATTTG...AGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
CDS-3UTR CCA 90 bp TCAGCTTCCGACAAAGAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTTTGGTCAGTCTCATTTaGCTTTTGCGTCCTGCGATA +
Preference number: 4 (lower is better)
Translates to: SASDKERIHSPFDLREVSLVSLI*LLRPAI
Trigger: TATCGCAGGACGCAAAAGCCAAATGAGACTGACCAA...ACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTCTTTGTCGGAAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp CAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACGGCGGGGGCGTTCACTaGTCTTCAATCCTGCTTAAG +
Preference number: 4 (lower is better)
Translates to: QDQNRNDYESGNTRRCIYGGGVH*SSILLK
Trigger: CTTAAGCAGGATTGAAGACCAGTGAACGCCCCCGCC...GTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp ACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTTGGGATGGAGCTATGTaGGCCAGTGTGGGCTCTAGA +
Preference number: 4 (lower is better)
Translates to: TRRCIYYTLTFSEAPTIFWDGAM*ASVGSR
Trigger: TCTAGAGCCCACACTGGCCCACATAGCTCCATCCCA...AAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp GAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATTGCCATGGCGGCCTGTaGCAGACACCAATGAAATCC +
Preference number: 4 (lower is better)
Translates to: EYKEVHLLHINVQRSSHNCHGGL*QTPMKS
Trigger: GGATTTCATTGGTGTCTGCCACAGGCCGCCATGGCA...ATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585630.5
ENST00000589710.5
CDS-3UTR CCA 90 bp TACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTCTTCATCTGATGCCATaGCGGCCACACACTGAGTCG +
Preference number: 4 (lower is better)
Translates to: YKEVHLLHINVQRSSHNLLHLMP*RPHTES
Trigger: CGACTCAGTGTGTGGCCGCCATGGCATCAGATGAAG...AAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587323.5
CDS-3UTR CCA 90 bp AAAAAGGACAATATAAATAAACATCTTCAAGAACCTCTCAGGGACGTCTGCACGGATGGACGCAGGGGCTaGTCTACTCGGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: KKDNINKHLQEPLRDVCTDGRRG*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGCCCCTGCGTCCATC...CGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTATTTATATTGTCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588344.2
CDS-3UTR TCA 90 bp CAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACGATCTGTCCGTACTTTaGGAAGACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: QDQNRNDYESGNTRRCIYDLSVL*EDLLQR
Trigger: TCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATC...GTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR TCA 90 bp TACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATTGGATCGATCTCAGAGAAGTaGGTGGGGCACCCACTTCAT +
Preference number: 4 (lower is better)
Translates to: YTLTFSEAPTIFKHTAIGSISEK*VGHPLH
Trigger: ATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGA...TCCAATGGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp CGTAAAGCCAAAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACTCGATCTCAGAGAAGTaGGTGGGGCACCCACTTCAT +
Preference number: 4 (lower is better)
Translates to: RKAKENCVQEFLSHCKYNSISEK*VGHPLH
Trigger: ATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGA...GTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp AGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACGGCGCCCTCGGAGTGTaGCTTACCGTAACTGTCATA +
Preference number: 4 (lower is better)
Translates to: RCIYYTLTFSEAPTIFKHGALGV*LTVTVI
Trigger: TATGACAGTTACGGTAAGTCACACTCCGAGGGCGCC...GTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp CTTCGTAAAGCCAAAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACCACAGTGACAAGGTCTaGGTGTCCAGCCTAAAGTGC +
Preference number: 4 (lower is better)
Translates to: LRKAKENCVQEFLSHCKYHSDKV*VSSLKC
Trigger: GCACTTTAGGCTGGACACTCAGACCTTGTCACTGTG...GTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp AGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACTCTGGGCAAGCACAGTaGCAAGGTCTGAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: RCIYYTLTFSEAPTIFKHSGQAQ*QGLSVQ
Trigger: CTGGACACTCAGACCTTGTCACTGTGCTTGCCCAGA...GTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp TTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCACTCGTTGTGTGTAGCTaGGGACAAGAAGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: FDKIRTEMTTKVGIQGGALVVCS*GQEAGT
Trigger: TGTGCCTGCTTCTTGTCCTCAGCTACACACAACGAG...TGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp GACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCCTCGTTGTGTGTAGCTaGGGACAAGAAGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: DYESGNTRRCIYYTLTFSLVVCS*GQEAGT
Trigger: TGTGCCTGCTTCTTGTCCTCAGCTACACACAACGAG...GCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp ATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACAAAGTTTGCCTTCATCTaGTGCCATGGCGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: IRTEMTTKVGIQGGAFTTKFAFI*CHGGLL
Trigger: CAGGAGGCCGCCATGGCATCAGATGAAGGCAAACTT...TGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586472.5
CDS-3UTR TCA 90 bp GGTCTTTTAATCGGCTTCGTAAAGCCAAAGAAAACTGCGTACAAGAATTCCTCAAAGTTTGCCTTCATCTaGTGCCATGGCGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: GLLIGFVKPKKTAYKNSSKFAFI*CHGGLP
Trigger: TGGCAGGCCGCCATGGCATCAGATGAAGGCAAACTT...TGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAGCCGATTAAAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588030.5
CDS-3UTR GCA 90 bp GGTCAGGCTGGGTTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATATACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: GQAGFDKIRTEMTTKVGIYFEKT*SSDCSL
Trigger: CAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTA...TATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR GCA 90 bp GGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACATACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: GNTRRCIYYTLTFSEAPTYFEKT*SSDCSL
Trigger: CAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTA...TGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR GCA 90 bp CTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGTATGCGTTACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: LRTRIPQPLQIQHRWSMRYFEKT*SSDCSL
Trigger: CAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTA...ACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp ATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGA +
Preference number: 4 (lower is better)
Translates to: IYYTLTFSEAPTIFKHTAGCLTT*LPGLLG
Trigger: TCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACC...GGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320936.9
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR GCA 90 bp ATAAATAAACATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGTTGGCTTTTGCGTCCTaGGATAGAAATGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: INKHLQEPLRDVCTSTVGLAFAS*DRNGSE
Trigger: CTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAA...CCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp TACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATTGGAGCCCTCGCTCTCCCTTaGCTTTTTGGTCAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: YTLTFSEAPTIFKHTAIGALALP*LFGQSH
Trigger: ATGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGC...TCCAATGGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR GCA 90 bp GATCTTGAGCAGGAAGGGTTTTTACTCGTTGTGTGTAGCGTAACTGTCATAACTTGGTCTACTCGGATCTaGCGTCCATCTACAGACTGG +
Preference number: 4 (lower is better)
Translates to: DLEQEGFLLVVCSVTVITWSTRI*RPSTDW
Trigger: CCAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...AGTTATGACAGTTACGCTACACACAACGAGTAAAAACCCTTCCTGCTCAAGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591055.5
CDS-3UTR GCA 90 bp AGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCGCAAGGAGTGTGTGGTaGAATGCAAGGGAATTGTCA +
Preference number: 4 (lower is better)
Translates to: SGNTRRCIYYTLTFSEAPARSVW*NARELS
Trigger: TGACAATTCCCTTGCATTGCACCACACACTCCTTGC...GGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp GGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGAACTGGTCTTCAATCCTaGTTAAGGGATTTCATCTAT +
Preference number: 4 (lower is better)
Translates to: GPLFESDFHRAPHRCGQGTGLQS*LRDFIY
Trigger: ATAGATGAAATCCCTTAAGCAGGATTGAAGACCAGT...TCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp AAAAAGGACAATATAAATAAACATCTTCAAGAACCTCTCAGGGACGTCTGCACGCTTCATCTGATGCCATaGCGGCCACTGAGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: KKDNINKHLQEPLRDVCTLHLMP*RPLSRA
Trigger: TGCCCGACTCAGTGGCCGCCATGGCATCAGATGAAG...CGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTATTTATATTGTCCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp GATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACCCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: DQNRNDYESGNTRRCIYYPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...GTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CCA 90 bp GAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: EYKEVHLLHINVQRSSHNPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...ATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CCA 90 bp CAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACACCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: QNRNDYESGNTRRCIYYTPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...TGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CCA 90 bp AAAAAGGACAATATAAATAAACATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCTGCACGTCTACTGTaGGGCGCACAGCACAGATGG +
Preference number: 4 (lower is better)
Translates to: KKDNINKHLQEPLRDVCTSARLL*GAQHRW
Trigger: CCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGA...CGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTATTTATATTGTCCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000588344.2
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp ACACGGTCTTTTAATCGGCTTCGTAAAGCCAAAGAAAACTGCGTACAAGAATTCCAGATGCGCCTCTTCTaGGCAAGCACAGTGACAAGG +
Preference number: 4 (lower is better)
Translates to: TRSFNRLRKAKENCVQEFQMRLF*ASTVTR
Trigger: CCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTG...GAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAGCCGATTAAAAGACCGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp TACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAACAGATGCGCCTCTTCTaGGCAAGCACAGTGACAAGG +
Preference number: 4 (lower is better)
Translates to: YESGNTRRCIYYTLTFSEQMRLF*ASTVTR
Trigger: CCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTG...TTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp TACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATTGATCTGTCCGTACTTTaGGAAGACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: YYTLTFSEAPTIFKHTAIDLSVL*EDLLQR
Trigger: TCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATC...AATGGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR TCA 90 bp GGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACATTGGAAGGACGATCTTaGGCAGGAAGGGTTTTTACT +
Preference number: 4 (lower is better)
Translates to: GNTRRCIYYTLTFSEAPTLEGRS*AGRVFT
Trigger: AGTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAA...TGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR TCA 90 bp GGTCAGGCTGGGTTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATATTGGAAGGACGATCTTaGGCAGGAAGGGTTTTTACT +
Preference number: 4 (lower is better)
Translates to: GQAGFDKIRTEMTTKVGILEGRS*AGRVFT
Trigger: AGTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAA...TATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR TCA 90 bp GTCAGAAGCGGTCAGGCTGGGTTTGACAAGATCAGAACCGAAATGACTACGAAAAGATCAGAACCGAAATaGCTACGAAAGTGGGAATAC +
Preference number: 4 (lower is better)
Translates to: VRSGQAGFDKIRTEMTTKRSEPK*LRKWEY
Trigger: GTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCT...TTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGCTTCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
CDS-3UTR TCA 90 bp CTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGACGGTCAGGCTGGGTTTaGCAAGATCAGAACCGAAAT +
Preference number: 4 (lower is better)
Translates to: LRKWEYKEVHLLHINVQRRSGWV*QDQNRN
Trigger: ATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCG...TCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR TCA 90 bp TACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATTTCGATCTCAGAGAAGTaGGTGGGGCACCCACTTCAT +
Preference number: 4 (lower is better)
Translates to: YYTLTFSEAPTIFKHTAISISEK*VGHPLH
Trigger: ATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGA...AATGGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp AAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTCTCGTTGTGTGTAGCTaGGGACAAGAAGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: KIRTEMTTKVGIQGGAFTLVVCS*GQEAGT
Trigger: TGTGCCTGCTTCTTGTCCTCAGCTACACACAACGAG...AGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR GCA 90 bp GGGTTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTTACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: GFDKIRTEMTTKVGIQGGYFEKT*SSDCSL
Trigger: CAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTA...ACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR GCA 90 bp CAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 4 (lower is better)
Translates to: QDQNRNDYESGNTRRCIYWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...GTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR GCA 90 bp CGGTCTTTTAATCGGCTTCGTAAAGCCAAAGAAAACTGCGTACAAGAATTCCTCTGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 4 (lower is better)
Translates to: RSFNRLRKAKENCVQEFLWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...GAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAGCCGATTAAAAGACCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
CDS-3UTR GCA 90 bp GACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCTGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 4 (lower is better)
Translates to: DYESGNTRRCIYYTLTFSWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...GCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR GCA 90 bp ACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTTGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 4 (lower is better)
Translates to: TRRCIYYTLTFSEAPTIFWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...AAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR GCA 90 bp AACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTAGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGA +
Preference number: 4 (lower is better)
Translates to: NRNDYESGNTRRCIYYTLGCLTT*LPGLLG
Trigger: TCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACC...TAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000320936.9
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CCA 90 bp AAAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGACCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: KENCVQEFLSHCKYNIDGPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...TCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp AATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCAATCCCCGAGATCTCTaGGTCTCCCTGTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: NTRRCIYYTLTFSEAPTINPRDL*VSLSFT
Trigger: TGTGAAAGACAGGGAGACCCAGAGATCTCGGGGATT...GATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
CDS-3UTR CCA 90 bp GTCAGAAGCGGTCAGGCTGGGTTTGACAAGATCAGAACCGAAATGACTACGAAACAAATACAACATCGATaGAGTATGCGTACGTCTTCC +
Preference number: 4 (lower is better)
Translates to: VRSGQAGFDKIRTEMTTKQIQHR*SMRTSS
Trigger: GGAAGACGTACGCATACTCCATCGATGTTGTATTTG...TTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGCTTCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp TTGAGCAGGAAGGGTTTTTACTCGTTGTGTGTAGCTGAGGACAAGAAGCAGGCACAAATACAACATCGATaGAGTATGCGTACGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LSRKGFYSLCVAEDKKQAQIQHR*SMRTSS
Trigger: GGAAGACGTACGCATACTCCATCGATGTTGTATTTG...TGCCTGCTTCTTGTCCTCAGCTACACACAACGAGTAAAAACCCTTCCTGCTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
CDS-3UTR CCA 90 bp TGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACTTGGTCAGTCTCATTTaGCTTTTGCGTCCTGCGATA +
Preference number: 4 (lower is better)
Translates to: WEYKEVHLLHINVQRSSHLVSLI*LLRPAI
Trigger: TATCGCAGGACGCAAAAGCCAAATGAGACTGACCAA...GTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CCA 90 bp AGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCTTGGTCAGTCTCATTTaGCTTTTGCGTCCTGCGATA +
Preference number: 4 (lower is better)
Translates to: SGNTRRCIYYTLTFSEAPLVSLI*LLRPAI
Trigger: TATCGCAGGACGCAAAAGCCAAATGAGACTGACCAA...GGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CCA 90 bp GTCAGAAGCGGTCAGGCTGGGTTTGACAAGATCAGAACCGAAATGACTACGAAATCTCCCTTGCCTTTTTaGTCAGTCTCATTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: VRSGQAGFDKIRTEMTTKSPLPF*SVSFGF
Trigger: AAAGCCAAATGAGACTGACCAAAAAGGCAAGGGAGA...TTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGCTTCTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CCA 90 bp ACACGGTCTTTTAATCGGCTTCGTAAAGCCAAAGAAAACTGCGTACAAGAATTCCTCAGAGGGTTCTGTTaGGCGCACAACACTTCTGTC +
Preference number: 4 (lower is better)
Translates to: TRSFNRLRKAKENCVQEFLRGFC*AHNTSV
Trigger: GACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAG...GAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAGCCGATTAAAAGACCGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp AGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGAGCAGGGCAGCATCTTaGAAATTGTTCAAAATCTCC +
Preference number: 4 (lower is better)
Translates to: SLIWLLRPAIEMALRGQMSRAAS*KLFKIS
Trigger: GGAGATTTTGAACAATTTCCAAGATGCTGCCCTGCT...CATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591097.5
CDS-3UTR TCA 90 bp AACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTAGATCTGTCCGTACTTTaGGAAGACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: NRNDYESGNTRRCIYYTLDLSVL*EDLLQR
Trigger: TCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATC...TAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR TCA 90 bp AAAAAGGACAATATAAATAAACATCTTCAAGAACCTCTCAGGGACGTCTGCACGGATCTGTCCGTACTTTaGGAAGACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: KKDNINKHLQEPLRDVCTDLSVL*EDLLQR
Trigger: TCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATC...CGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTATTTATATTGTCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000588344.2
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp TTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATTGGAAGGACGAGATCAGAACCGAAATaGCTACGAAAGTGGGAATAC +
Preference number: 4 (lower is better)
Translates to: LTFSEAPTIFKHTAIGRTRSEPK*LRKWEY
Trigger: GTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCT...CGTCCTTCCAATGGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR TCA 90 bp TGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAGATCAGAACCGAAATaGCTACGAAAGTGGGAATAC +
Preference number: 4 (lower is better)
Translates to: WEYKEVHLLHINVQRSSHRSEPK*LRKWEY
Trigger: GTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCT...GTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR TCA 90 bp AAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGTATCGGTCAGGCTGGGTTTaGCAAGATCAGAACCGAAAT +
Preference number: 4 (lower is better)
Translates to: KTAYKNSSATANTTSMEYRSGWV*QDQNRN
Trigger: ATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCG...ATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp TACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAACGGTCAGGCTGGGTTTaGCAAGATCAGAACCGAAAT +
Preference number: 4 (lower is better)
Translates to: YESGNTRRCIYYTLTFSERSGWV*QDQNRN
Trigger: ATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCG...TTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR TCA 90 bp AACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTACATTCCCCGGGCACATaGCTTTCAGTGAGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: NRNDYESGNTRRCIYYTLHSPGT*LSVSSQ
Trigger: TTGAGAGCTCACTGAAAGTCATGTGCCCGGGGAATG...TAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp ATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACATGTGGCAGACACCAATaGAATCCTCAACAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: IRTEMTTKVGIQGGAFTTCGRHQ*NPQQGS
Trigger: TGACCCCTGTTGAGGATTTCATTGGTGTCTGCCACA...TGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585630.5
ENST00000589710.5
CDS-3UTR TCA 90 bp AGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACAAGACAGACAAACGTTaGGTACCGGAAGGTACCCGT +
Preference number: 4 (lower is better)
Translates to: RCIYYTLTFSEAPTIFKHKTDKR*VPEGTR
Trigger: ACGGGTACCTTCCGGTACTCAACGTTTGTCTGTCTT...GTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591097.5
CDS-3UTR GCA 90 bp TACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATTGGATACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: YTLTFSEAPTIFKHTAIGYFEKT*SSDCSL
Trigger: CAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTA...TCCAATGGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR GCA 90 bp AATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: NTRRCIYYTLTFSEAPTIYFEKT*SSDCSL
Trigger: CAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTA...GATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR GCA 90 bp AGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACTGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 4 (lower is better)
Translates to: RCIYYTLTFSEAPTIFKHWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...GTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR GCA 90 bp TTGAGCAGGAAGGGTTTTTACTCGTTGTGTGTAGCTGAGGACAAGAAGCAGGCAGGGAATACAAGGAGGTaGATTTACTACACATTAACG +
Preference number: 4 (lower is better)
Translates to: LSRKGFYSLCVAEDKKQAGNTRR*IYYTLT
Trigger: CGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC...TGCCTGCTTCTTGTCCTCAGCTACACACAACGAGTAAAAACCCTTCCTGCTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR GCA 90 bp ACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTTTGGCTTTTGCGTCCTaGGATAGAAATGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: TRRCIYYTLTFSEAPTIFLAFAS*DRNGSE
Trigger: CTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAA...AAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR GCA 90 bp AATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCGCAAGGAGTGTGTGGTaGAATGCAAGGGAATTGTCA +
Preference number: 4 (lower is better)
Translates to: NTRRCIYYTLTFSEAPTIARSVW*NARELS
Trigger: TGACAATTCCCTTGCATTGCACCACACACTCCTTGC...GATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp AAAAAGGACAATATAAATAAACATCTTCAAGAACCTCTCAGGGACGTCTGCACGCCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: KKDNINKHLQEPLRDVCTPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...CGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTATTTATATTGTCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000588344.2
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp AGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACAATCCCCGAGATCTCTaGGTCTCCCTGTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: RCIYYTLTFSEAPTIFKHNPRDL*VSLSFT
Trigger: TGTGAAAGACAGGGAGACCCAGAGATCTCGGGGATT...GTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
CDS-3UTR CCA 90 bp ATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCAATCCCCGAGATCTCTaGGTCTCCCTGTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: IYYTLTFSEAPTIFKHTANPRDL*VSLSFT
Trigger: TGTGAAAGACAGGGAGACCCAGAGATCTCGGGGATT...GGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
CDS-3UTR CCA 90 bp ATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACAAATCCCCGAGATCTCTaGGTCTCCCTGTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: IRTEMTTKVGIQGGAFTTNPRDL*VSLSFT
Trigger: TGTGAAAGACAGGGAGACCCAGAGATCTCGGGGATT...TGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
CDS-3UTR CCA 90 bp AAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTAATCCCCGAGATCTCTaGGTCTCCCTGTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: KIRTEMTTKVGIQGGAFTNPRDL*VSLSFT
Trigger: TGTGAAAGACAGGGAGACCCAGAGATCTCGGGGATT...AGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
CDS-3UTR CCA 90 bp AAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGTATGCAGCAAGGAGTGTGTaGTGCAATGCAAGGGAATTG +
Preference number: 4 (lower is better)
Translates to: KTAYKNSSATANTTSMEYAARSV*CNAREL
Trigger: CAATTCCCTTGCATTGCACCACACACTCCTTGCTGC...ATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp CGTAAAGCCAAAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACTTGGAAGGACGATCTTaGGCAGGAAGGGTTTTTACT +
Preference number: 4 (lower is better)
Translates to: RKAKENCVQEFLSHCKYNLEGRS*AGRVFT
Trigger: AGTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAA...GTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp TACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTTGGAAGGACGATCTTaGGCAGGAAGGGTTTTTACT +
Preference number: 4 (lower is better)
Translates to: YKEVHLLHINVQRSSHNLLEGRS*AGRVFT
Trigger: AGTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAA...AAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR TCA 90 bp GATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACTTGGAAGGACGATCTTaGGCAGGAAGGGTTTTTACT +
Preference number: 4 (lower is better)
Translates to: DQNRNDYESGNTRRCIYYLEGRS*AGRVFT
Trigger: AGTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAA...GTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR TCA 90 bp ACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTTTGGAAGGACGATCTTaGGCAGGAAGGGTTTTTACT +
Preference number: 4 (lower is better)
Translates to: TRRCIYYTLTFSEAPTIFLEGRS*AGRVFT
Trigger: AGTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAA...AAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 15 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR TCA 90 bp AAAAAGGACAATATAAATAAACATCTTCAAGAACCTCTCAGGGACGTCTGCACGTGTGGCAGACACCAATaGAATCCTCAACAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: KKDNINKHLQEPLRDVCTCGRHQ*NPQQGS
Trigger: TGACCCCTGTTGAGGATTTCATTGGTGTCTGCCACA...CGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTATTTATATTGTCCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589710.5
CDS-3UTR GCA 90 bp AGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACTACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: RCIYYTLTFSEAPTIFKHYFEKT*SSDCSL
Trigger: CAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTA...GTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR GCA 90 bp TGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACATGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 4 (lower is better)
Translates to: CIYYTLTFSEAPTIFKHTWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...TGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR GCA 90 bp AACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTATGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 4 (lower is better)
Translates to: NRNDYESGNTRRCIYYTLWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...TAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR GCA 90 bp AAAAAGGACAATATAAATAAACATCTTCAAGAACCTCTCAGGGACGTCTGCACGTGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 4 (lower is better)
Translates to: KKDNINKHLQEPLRDVCTWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...CGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTATTTATATTGTCCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000588344.2
ENST00000589710.5
CDS-3UTR GCA 90 bp TTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATTGGAAGGACGGGGAATACAAGGAGGTaGATTTACTACACATTAACG +
Preference number: 4 (lower is better)
Translates to: LTFSEAPTIFKHTAIGRTGNTRR*IYYTLT
Trigger: CGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC...CGTCCTTCCAATGGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR GCA 90 bp CATTGGAAGGACGATCTTGAGCAGGAAGGGTTTTTACTCGTTGTGTGTAGCGTAGGGAATACAAGGAGGTaGATTTACTACACATTAACG +
Preference number: 4 (lower is better)
Translates to: HWKDDLEQEGFLLVVCSVGNTRR*IYYTLT
Trigger: CGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC...TACGCTACACACAACGAGTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591055.5
ENST00000593048.5
CDS-3UTR GCA 90 bp CAAGGAGTGTGTGGTGCAATGCAAGGGAATTGTCAGAGCAAGGTTCATTTCACAAACATCGATGGAGTATaGGTACGTCTTCCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: QGVCGAMQGNCQSKVHFTNIDGV*VRLPVK
Trigger: TTTTACTGGAAGACGTACGCATACTCCATCGATGTT...TGTGAAATGAACCTTGCTCTGACAATTCCCTTGCATTGCACCACACACTCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp GGTCAGGCTGGGTTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATAAAAGCCAAAGAAAACTaGGTACAAGAATTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GQAGFDKIRTEMTTKVGIKAKEN*VQEFLS
Trigger: GCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTT...TATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp TACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATTTTGGCTTTTGCGTCCTaGGATAGAAATGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: YYTLTFSEAPTIFKHTAILAFAS*DRNGSE
Trigger: CTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAA...AATGGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR GCA 90 bp AAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGTATGCAAGGAGTGTGTGGTaGAATGCAAGGGAATTGTCA +
Preference number: 4 (lower is better)
Translates to: KTAYKNSSATANTTSMEYARSVW*NARELS
Trigger: TGACAATTCCCTTGCATTGCACCACACACTCCTTGC...ATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp TGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAAATCCCCGAGATCTCTaGGTCTCCCTGTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: CIYYTLTFSEAPTIFKHTNPRDL*VSLSFT
Trigger: TGTGAAAGACAGGGAGACCCAGAGATCTCGGGGATT...TGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
CDS-3UTR CCA 90 bp AAAAAGGACAATATAAATAAACATCTTCAAGAACCTCTCAGGGACGTCTGCACGAATCCCCGAGATCTCTaGGTCTCCCTGTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: KKDNINKHLQEPLRDVCTNPRDL*VSLSFT
Trigger: TGTGAAAGACAGGGAGACCCAGAGATCTCGGGGATT...CGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTATTTATATTGTCCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000588344.2
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp TACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTAGATCAGAACCGAAATaGCTACGAAAGTGGGAATAC +
Preference number: 4 (lower is better)
Translates to: YKEVHLLHINVQRSSHNLRSEPK*LRKWEY
Trigger: GTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCT...AAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR TCA 90 bp AAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGAGATCAGAACCGAAATaGCTACGAAAGTGGGAATAC +
Preference number: 4 (lower is better)
Translates to: KKTAYKNSSATANTTSMERSEPK*LRKWEY
Trigger: GTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCT...CTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp TACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATTGGAAGATCAGAACCGAAATaGCTACGAAAGTGGGAATAC +
Preference number: 4 (lower is better)
Translates to: YTLTFSEAPTIFKHTAIGRSEPK*LRKWEY
Trigger: GTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCT...TCCAATGGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR GCA 90 bp AAAAAGGACAATATAAATAAACATCTTCAAGAACCTCTCAGGGACGTCTGCACGTACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: KKDNINKHLQEPLRDVCTYFEKT*SSDCSL
Trigger: CAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTA...CGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTATTTATATTGTCCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000588344.2
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp CGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCGGGAATACAAGGAGGTaGATTTACTACACATTAACG +
Preference number: 4 (lower is better)
Translates to: RKWEYKEVHLLHINVQRSGNTRR*IYYTLT
Trigger: CGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC...GCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR GCA 90 bp GGGTTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTAACATCGATGGAGTATaGGTACGTCTTCCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: GFDKIRTEMTTKVGIQGGNIDGV*VRLPVK
Trigger: TTTTACTGGAAGACGTACGCATACTCCATCGATGTT...ACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp AGCCAAAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGAGAATTCCTCAGCCACTaGAAATACAACATCGATGGA +
Preference number: 4 (lower is better)
Translates to: SQRKLRTRIPQPLQIQHREFLSH*KYNIDG
Trigger: TCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTC...TCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp CAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACAGAATTCCTCAGCCACTaGAAATACAACATCGATGGA +
Preference number: 4 (lower is better)
Translates to: QNRNDYESGNTRRCIYYTEFLSH*KYNIDG
Trigger: TCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTC...TGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp ATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCTTGGTCAGTCTCATTTaGCTTTTGCGTCCTGCGATA +
Preference number: 4 (lower is better)
Translates to: IYYTLTFSEAPTIFKHTALVSLI*LLRPAI
Trigger: TATCGCAGGACGCAAAAGCCAAATGAGACTGACCAA...GGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CCA 90 bp AAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGTCTCCCTTGCCTTTTTaGTCAGTCTCATTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: KKTAYKNSSATANTTSMESPLPF*SVSFGF
Trigger: AAAGCCAAATGAGACTGACCAAAAAGGCAAGGGAGA...CTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp TACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTCTCCCTTGCCTTTTTaGTCAGTCTCATTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: YKEVHLLHINVQRSSHNLSPLPF*SVSFGF
Trigger: AAAGCCAAATGAGACTGACCAAAAAGGCAAGGGAGA...AAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR GCA 90 bp AGCCAAAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGAGGGAATACAAGGAGGTaGATTTACTACACATTAACG +
Preference number: 4 (lower is better)
Translates to: SQRKLRTRIPQPLQIQHRGNTRR*IYYTLT
Trigger: CGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC...TCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp GACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGGGAATACAAGGAGGTaGATTTACTACACATTAACG +
Preference number: 4 (lower is better)
Translates to: DYESGNTRRCIYYTLTFSGNTRR*IYYTLT
Trigger: CGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC...GCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR GCA 90 bp TACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATTGGAGGGAATACAAGGAGGTaGATTTACTACACATTAACG +
Preference number: 4 (lower is better)
Translates to: YTLTFSEAPTIFKHTAIGGNTRR*IYYTLT
Trigger: CGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC...TCCAATGGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR GCA 90 bp CAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACAGGGAATACAAGGAGGTaGATTTACTACACATTAACG +
Preference number: 4 (lower is better)
Translates to: QNRNDYESGNTRRCIYYTGNTRR*IYYTLT
Trigger: CGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC...TGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR GCA 90 bp TACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTAACATCGATGGAGTATaGGTACGTCTTCCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: YKEVHLLHINVQRSSHNLNIDGV*VRLPVK
Trigger: TTTTACTGGAAGACGTACGCATACTCCATCGATGTT...AAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp AGCCAAAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGAAACATCGATGGAGTATaGGTACGTCTTCCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: SQRKLRTRIPQPLQIQHRNIDGV*VRLPVK
Trigger: TTTTACTGGAAGACGTACGCATACTCCATCGATGTT...TCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp AAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTGAATTCCTCAGCCACTaGAAATACAACATCGATGGA +
Preference number: 4 (lower is better)
Translates to: KIRTEMTTKVGIQGGAFTEFLSH*KYNIDG
Trigger: TCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTC...AGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp AAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCACTGGTCTTCAATCCTaGTTAAGGGATTTCATCTAT +
Preference number: 4 (lower is better)
Translates to: KWEYKEVHLLHINVQRSSTGLQS*LRDFIY
Trigger: ATAGATGAAATCCCTTAAGCAGGATTGAAGACCAGT...GGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp TACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAACAAATACAACATCGATaGAGTATGCGTACGTCTTCC +
Preference number: 4 (lower is better)
Translates to: YESGNTRRCIYYTLTFSEQIQHR*SMRTSS
Trigger: GGAAGACGTACGCATACTCCATCGATGTTGTATTTG...TTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp AAAAAGGACAATATAAATAAACATCTTCAAGAACCTCTCAGGGACGTCTGCACGTTGGTCAGTCTCATTTaGCTTTTGCGTCCTGCGATA +
Preference number: 4 (lower is better)
Translates to: KKDNINKHLQEPLRDVCTLVSLI*LLRPAI
Trigger: TATCGCAGGACGCAAAAGCCAAATGAGACTGACCAA...CGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTATTTATATTGTCCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp AAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGTATTCTCCCTTGCCTTTTTaGTCAGTCTCATTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: KTAYKNSSATANTTSMEYSPLPF*SVSFGF
Trigger: AAAGCCAAATGAGACTGACCAAAAAGGCAAGGGAGA...ATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp AAAAAGGACAATATAAATAAACATCTTCAAGAACCTCTCAGGGACGTCTGCACGAGATCAGAACCGAAATaGCTACGAAAGTGGGAATAC +
Preference number: 4 (lower is better)
Translates to: KKDNINKHLQEPLRDVCTRSEPK*LRKWEY
Trigger: GTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCT...CGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTATTTATATTGTCCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp TACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAAACATCGATGGAGTATaGGTACGTCTTCCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: YESGNTRRCIYYTLTFSENIDGV*VRLPVK
Trigger: TTTTACTGGAAGACGTACGCATACTCCATCGATGTT...TTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp ATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACAAACATCGATGGAGTATaGGTACGTCTTCCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: IRTEMTTKVGIQGGAFTTNIDGV*VRLPVK
Trigger: TTTTACTGGAAGACGTACGCATACTCCATCGATGTT...TGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp AGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACAAAGCCAAAGAAAACTaGGTACAAGAATTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: RCIYYTLTFSEAPTIFKHKAKEN*VQEFLS
Trigger: GCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTT...GTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp ATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACAAAAGCCAAAGAAAACTaGGTACAAGAATTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: IRTEMTTKVGIQGGAFTTKAKEN*VQEFLS
Trigger: GCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTT...TGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp AAAAAGGACAATATAAATAAACATCTTCAAGAACCTCTCAGGGACGTCTGCACGCAAATACAACATCGATaGAGTATGCGTACGTCTTCC +
Preference number: 4 (lower is better)
Translates to: KKDNINKHLQEPLRDVCTQIQHR*SMRTSS
Trigger: GGAAGACGTACGCATACTCCATCGATGTTGTATTTG...CGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTATTTATATTGTCCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000588344.2
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp TGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGGGAATACAAGGAGGTaGATTTACTACACATTAACG +
Preference number: 4 (lower is better)
Translates to: CIYYTLTFSEAPTIFKHTGNTRR*IYYTLT
Trigger: CGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC...TGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR GCA 90 bp AAAAAGGACAATATAAATAAACATCTTCAAGAACCTCTCAGGGACGTCTGCACGAACATCGATGGAGTATaGGTACGTCTTCCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: KKDNINKHLQEPLRDVCTNIDGV*VRLPVK
Trigger: TTTTACTGGAAGACGTACGCATACTCCATCGATGTT...CGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTATTTATATTGTCCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000588344.2
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp AACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTAAAAGCCAAAGAAAACTaGGTACAAGAATTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: NRNDYESGNTRRCIYYTLKAKEN*VQEFLS
Trigger: GCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTT...TAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS GCA 90 bp CCTCGCTCCGTCCGCGGCGTTTGGCTCGAGCGGCCGGGCTCCCGGTaGCGCCGCTCCACGCAGACGCCTCGCGTGGGAGAGGGGGCCCCG +
Preference number: 5 (lower is better)
Translates to: PRSVRGVWLERPGSR*RRSTQTPRVGEGAP
Trigger: CGGGGCCCCCTCTCCCACGCGAGGCGTCTGCGTGGAGCGGCGGCACCGGGAGCCCGGCCGCTCGAGCCAAACGCCGCGGACGGAGCGAGG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589266.5
CDS GCA 90 bp GGACCCGACCGGGACGCGCTGCCCGTTGCGGACACCAGGGGGCGCTaGGGCCTCGCTCCGTCCGCGGCGTTTGGCTCGAGCGGCCGGGCT +
Preference number: 5 (lower is better)
Translates to: GPDRDALPVADTRGR*GLAPSAAFGSSGRA
Trigger: AGCCCGGCCGCTCGAGCCAAACGCCGCGGACGGAGCGAGGCCGCAGCGCCCCCTGGTGTCCGCAACGGGCAGCGCGTCCCGGTCGGGTCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589266.5
CDS TCA 90 bp GGGTCTCAGGCGGCTGGGACCCCTTCATCCACCCCTGCTGGCCACTaGCCATGCGGGACCCGACCGGGACGCGCTGCCCGTTGCGGACAC +
Preference number: 5 (lower is better)
Translates to: GSQAAGTPSSTPAGH*PCGTRPGRAARCGH
Trigger: GTGTCCGCAACGGGCAGCGCGTCCCGGTCGGGTCCCGCATGGTCAGTGGCCAGCAGGGGTGGATGAAGGGGTCCCAGCCGCCTGAGACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588090.5
CDS-3UTR CAA 90 bp GGGGCTCCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCGGGGCTCCAGGGCAGTaGCTGCCACACCCGCCGGGG +
Preference number: 5 (lower is better)
Translates to: GAPGQLLPHPPGSYHTTLGAPGQ*LPHPPG
Trigger: CCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCC...GAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CAA 90 bp CCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGGGCGGGTCTGCACCTaGGCGCAGCTGGAGCCAGCT +
Preference number: 5 (lower is better)
Translates to: PVSCRRTAARAPGETRGPGRVCT*AQLEPA
Trigger: AGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCCC...AGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CAA 90 bp TGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCACAGGGCTCCACATCGTaGTGGGCAAGGACTGGCCGC +
Preference number: 5 (lower is better)
Translates to: WARTGRPVSCRRTAARAPQGSTS*WARTGR
Trigger: GCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTG...TGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS CCA 90 bp GAGCGGGTTCCTGGGTGCGGGCTCCGTGAGTGTCCGCAGCCATCCTaGGTTCCCAGGGTGGCGTTGACACGCACCTGCGCACACCTGCCG +
Preference number: 5 (lower is better)
Translates to: ERVPGCGLRECPQPS*VPRVALTRTCAHLP
Trigger: CGGCAGGTGTGCGCAGGTGCGTGTCAACGCCACCCTGGGAACCCAGGATGGCTGCGGACACTCACGGAGCCCGCACCCAGGAACCCGCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586548.5
CDS-3UTR CAA 90 bp ATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGCAGGGCTCCACATCGTaGTGGGCAAGGACTGGCCGC +
Preference number: 5 (lower is better)
Translates to: IVVGKDWPPRKLPAHRSPQGSTS*WARTGR
Trigger: GCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTG...CGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CAA 90 bp CCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCCAGGGCTCCACATCGTaGTGGGCAAGGACTGGCCGC +
Preference number: 5 (lower is better)
Translates to: PQPVLQERLEALSPHLTGQGSTS*WARTGR
Trigger: GCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTG...GCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CAA 90 bp GCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGGCCCCAGGGAAGGCTaGCAGACCCGCTGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: ARAPGETRGPEPAPHWRSGPREG*QTRCFS
Trigger: GGAGAAGCAGCGGGTCTGCAAGCCTTCCCTGGGGCC...GCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CAA 90 bp CGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCGGTTGTCTGACGACTaGCCTGCCTGGTCTACTCGG +
Preference number: 5 (lower is better)
Translates to: RPVSCRRTAARAPGETRGRLSDD*PAWSTR
Trigger: CCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCG...GCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
CDS-3UTR CAA 90 bp GCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGATACCCACGGGATCGGTaGTCTGACGACTTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: ARTGRPVSCRRTAARAPGYPRDR*SDDLPA
Trigger: GGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTA...TCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
CDS-3UTR CAA 90 bp CCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGGGGCTCCAGGGCAGTaGCTGCCACACCCGCCGGGG +
Preference number: 5 (lower is better)
Translates to: PGQLLPHPPGSYHTTLRNGAPGQ*LPHPPG
Trigger: CCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCC...GTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CAA 90 bp CAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCGGGGCTCCAGGGCAGTaGCTGCCACACCCGCCGGGG +
Preference number: 5 (lower is better)
Translates to: QASWASGCLQLLFQVKSLGAPGQ*LPHPPG
Trigger: CCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCC...GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CAA 90 bp GCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCCAGGGCTCCACATCGTaGTGGGCAAGGACTGGCCGC +
Preference number: 5 (lower is better)
Translates to: ARAPGETRGPEPAPHWRSQGSTS*WARTGR
Trigger: GCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTG...GCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CAA 90 bp CTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTCCAGGGCTCCACATCGTaGTGGGCAAGGACTGGCCGC +
Preference number: 5 (lower is better)
Translates to: LEALSPHLTGEAPQGTSLQGSTS*WARTGR
Trigger: GCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTG...GAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS TCA 90 bp CTGATGCCATGGCGGCTACGAGCGGGTTCCTGGGTGCGGGCTCCGTaGGTGTCCGCAGCCATCCTGGGTTCCCAGGGTGGCGTTGACACG +
Preference number: 5 (lower is better)
Translates to: LMPWRLRAGSWVRAP*VSAAILGSQGGVDT
Trigger: CGTGTCAACGCCACCCTGGGAACCCAGGATGGCTGCGGACACTCACGGAGCCCGCACCCAGGAACCCGCTCGTAGCCGCCATGGCATCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586548.5
CDS-3UTR CAA 90 bp CCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGAGTTGGGGGGCTCCAGGGCAGTaGCTGCCACACCCGCCGGGG +
Preference number: 5 (lower is better)
Translates to: PHPPGSYHTTLRNVTRSWGAPGQ*LPHPPG
Trigger: CCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCC...CCAACTCCGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CAA 90 bp CGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCGGCCCTCGCTCTCCCTaGCCTTTTTGGTCAGTCTCA +
Preference number: 5 (lower is better)
Translates to: RPVSCRRTAARAPGETRGGPRSP*PFWSVS
Trigger: TGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGCC...GCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CAA 90 bp GGGAGGCGCTGCCCTGCACCCAACACACACCGAAAGGCGCCCGCCATGGGGCCAGGCTGCCTCCAGCTCTaGTTCCAGGTGAAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: GRRCPAPNTHRKAPAMGPGCLQL*FQVKSL
Trigger: GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCC...TGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CAA 90 bp CTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTCCTGGGCAAGCAGGGCTCCACATCGTaGTGGGCAAGGACTGGCCGC +
Preference number: 5 (lower is better)
Translates to: LSPHLTGEAPQGTSLLGKQGSTS*WARTGR
Trigger: GCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTG...CTTGCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS TCA 90 bp CATGGCTGCTCAGCCACAGTCCCTGGAGGGTCAGGGGCCCAGCTGTaGGGCAGGCGGTGCCCAAGACGCTCTCTGGACCGCACTGCTTCA +
Preference number: 5 (lower is better)
Translates to: HGCSATVPGGSGAQL*GRRCPRRSLDRTAS
Trigger: TGAAGCAGTGCGGTCCAGAGAGCGTCTTGGGCACCGCCTGCCTCACAGCTGGGCCCCTGACCCTCCAGGGACTGTGGCTGAGCAGCCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589161.1
CDS GCA 90 bp AAGTTGGAGCCCACAGCCAAGCAGCGGGCGGCCACGGGGGATTCCTaGCTCCTGAGTCCTCAACTCTCTTGGCCCGGAGCTCACACCGGC +
Preference number: 5 (lower is better)
Translates to: KLEPTAKQRAATGDS*LLSPQLSWPGAHTG
Trigger: GCCGGTGTGAGCTCCGGGCCAAGAGAGTTGAGGACTCAGGAGGCAGGAATCCCCCGTGGCCGCCCGCTGCTTGGCTGTGGGCTCCAACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589161.1
CDS CCA 90 bp GGTCAGGGGCCCAGCTGTGAGGCAGGCGGTGCCCAAGACGCTCTCTaGACCGCACTGCTTCATCTGAGAGGTGGGCATGCCAGCAGCACC +
Preference number: 5 (lower is better)
Translates to: GQGPSCEAGGAQDAL*TALLHLRGGHASST
Trigger: GGTGCTGCTGGCATGCCCACCTCTCAGATGAAGCAGTGCGGTCCAGAGAGCGTCTTGGGCACCGCCTGCCTCACAGCTGGGCCCCTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589161.1
CDS-3UTR CAA 90 bp CAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCCGGTTGTCTGACGACTaGCCTGCCTGGTCTACTCGG +
Preference number: 5 (lower is better)
Translates to: QGSTSLWARTGRPVSCRRRLSDD*PAWSTR
Trigger: CCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCG...GCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
CDS-3UTR CAA 90 bp GCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCCGGTTGTCTGACGACTaGCCTGCCTGGTCTACTCGG +
Preference number: 5 (lower is better)
Translates to: ARAPGETRGPEPAPHWRSRLSDD*PAWSTR
Trigger: CCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCG...GCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
CDS-3UTR CAA 90 bp CGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTGACTTACCGCGGTTGTCTGACGACTaGCCTGCCTGGTCTACTCGG +
Preference number: 5 (lower is better)
Translates to: RAPTAGHSSVAPSECDLPRLSDD*PAWSTR
Trigger: CCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCG...CGGTAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000591097.5
CDS-3UTR CAA 90 bp GGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGGCTGCCTCCAGCTCTaGTTCCAGGTGAAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: GSTSLWARTGRPVSCRRTGCLQL*FQVKSL
Trigger: GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCC...GGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS TCA 90 bp AGCCCACAGCCAAGCAGCGGGCGGCCACGGGGGATTCCTGCCTCCTaGGTCCTCAACTCTCTTGGCCCGGAGCTCACACCGGCATTTCAG +
Preference number: 5 (lower is better)
Translates to: SPQPSSGRPRGIPAS*VLNSLGPELTPAFQ
Trigger: CTGAAATGCCGGTGTGAGCTCCGGGCCAAGAGAGTTGAGGACTCAGGAGGCAGGAATCCCCCGTGGCCGCCCGCTGCTTGGCTGTGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589161.1
CDS GCA 90 bp AGCACTGTGCACCGGCTTCCAGGTGTGGACCTGTGTCGGTACCTGTaGCTCTGGGGTCAGCTGCGTCTGCGAGCACCCGTGACTCCCAGG +
Preference number: 5 (lower is better)
Translates to: STVHRLPGVDLCRYL*LWGQLRLRAPVTPR
Trigger: CCTGGGAGTCACGGGTGCTCGCAGACGCAGCTGACCCCAGAGGCACAGGTACCGACACAGGTCCACACCTGGAAGCCGGTGCACAGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592815.5
CDS GCA 90 bp GGCGGCCTGCGCACACCTGCCGCTTTGCATCTGTGCCGAGCACTGTaGACCGGCTTCCAGGTGTGGACCTGTGTCGGTACCTGTGCCTCT +
Preference number: 5 (lower is better)
Translates to: GGLRTPAALHLCRAL*TGFQVWTCVGTCAS
Trigger: AGAGGCACAGGTACCGACACAGGTCCACACCTGGAAGCCGGTGCACAGTGCTCGGCACAGATGCAAAGCGGCAGGTGTGCGCAGGCCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592815.5
CDS-3UTR CAA 90 bp GGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGATCCAGCGACTGCTCATaGGTGTCAAAACTCAGCCCT +
Preference number: 5 (lower is better)
Translates to: GRPVSCRRTAARAPGETRSSDCS*VSKLSP
Trigger: AGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGGA...TCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR CAA 90 bp CTCACTGGCGAAGCGCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCACGGTTGTCTGACGACTaGCCTGCCTGGTCTACTCGG +
Preference number: 5 (lower is better)
Translates to: LTGEAPQGTSLLGKRLPPRLSDD*PAWSTR
Trigger: CCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCG...TGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586636.5
ENST00000587169.5
ENST00000591376.5
CDS-3UTR CAA 90 bp GGGGCTCCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCCGGTTGTCTGACGACTaGCCTGCCTGGTCTACTCGG +
Preference number: 5 (lower is better)
Translates to: GAPGQLLPHPPGSYHTTLRLSDD*PAWSTR
Trigger: CCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCG...GAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320936.9
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
CDS-3UTR CAA 90 bp AAGGTGAACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTCGGTTGTCTGACGACTaGCCTGCCTGGTCTACTCGG +
Preference number: 5 (lower is better)
Translates to: KVNRAPTAGHSSVAPSECRLSDD*PAWSTR
Trigger: CCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCG...ACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000591097.5
CDS-3UTR CAA 90 bp CTGCCCTGCACCCAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGTACCCACGGGATCGGTaGTCTGACGACTTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: LPCTQHTPKGARHGAIGAYPRDR*SDDLPA
Trigger: GGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTA...CGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CAA 90 bp GTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTTACCCACGGGATCGGTaGTCTGACGACTTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: VLQERLEALSPHLTGEAPYPRDR*SDDLPA
Trigger: GGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTA...AGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
CDS-3UTR CAA 90 bp GAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTGACTTACCGTTACCCACGGGATCGGTaGTCTGACGACTTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: ELPPQATAAWRPRSVTYRYPRDR*SDDLPA
Trigger: GGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTA...ACGGTAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000591097.5
CDS-3UTR CAA 90 bp AGTAACGAGGCCATCCCGGCGTCAGAAGCGGTCAGGCTGGGTTTGACAAGATCAGGGGCTCCAGGGCAGTaGCTGCCACACCCGCCGGGG +
Preference number: 5 (lower is better)
Translates to: SNEAIPASEAVRLGLTRSGAPGQ*LPHPPG
Trigger: CCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCC...TGATCTTGTCAAACCCAGCCTGACCGCTTCTGACGCCGGGATGGCCTCGTTACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CAA 90 bp CTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGCAGGGCTCCACATCGTaGTGGGCAAGGACTGGCCGC +
Preference number: 5 (lower is better)
Translates to: LLGKRLPPALVPGEVPPGQGSTS*WARTGR
Trigger: GCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTG...CCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CAA 90 bp CGTGCCTCTGCTCTCTGGCCTGCTTCTAGACTGAGGCAGTCCAGGTCAGCGTCAGGGCGGGTCTGCACCTaGGCGCAGCTGGAGCCAGCT +
Preference number: 5 (lower is better)
Translates to: RASALWPASRLRQSRSASGRVCT*AQLEPA
Trigger: AGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCCC...TGACGCTGACCTGGACTGCCTCAGTCTAGAAGCAGGCCAGAGAGCAGAGGCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS TCA 90 bp TCCCCACCTGGCACAGGCCCTGTTCACTCCAACCACTGCCTTCTCTaGGCACACACCAAGTTGGAGCCCACAGCCAAGCAGCGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: SPPGTGPVHSNHCLL*AHTKLEPTAKQRAA
Trigger: GGCCGCCCGCTGCTTGGCTGTGGGCTCCAACTTGGTGTGTGCTCAGAGAAGGCAGTGGTTGGAGTGAACAGGGCCTGTGCCAGGTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589161.1
CDS CCA 90 bp GTGCACCGGCTTCCAGGTGTGGACCTGTGTCGGTACCTGTGCCTCTaGGGTCAGCTGCGTCTGCGAGCACCCGTGACTCCCAGGTATCTC +
Preference number: 5 (lower is better)
Translates to: VHRLPGVDLCRYLCL*GQLRLRAPVTPRYL
Trigger: GAGATACCTGGGAGTCACGGGTGCTCGCAGACGCAGCTGACCCCAGAGGCACAGGTACCGACACAGGTCCACACCTGGAAGCCGGTGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592815.5
CDS CCA 90 bp GCCGCTTTGCATCTGTGCCGAGCACTGTGCACCGGCTTCCAGGTGTaGACCTGTGTCGGTACCTGTGCCTCTGGGGTCAGCTGCGTCTGC +
Preference number: 5 (lower is better)
Translates to: AALHLCRALCTGFQV*TCVGTCASGVSCVC
Trigger: GCAGACGCAGCTGACCCCAGAGGCACAGGTACCGACACAGGTCCACACCTGGAAGCCGGTGCACAGTGCTCGGCACAGATGCAAAGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592815.5
CDS-3UTR CAA 90 bp AAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAAGATCTGTCCGTACTTaGAGAAGACCTGCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: KDWPPRKLPAHRSPCSRRRSVRT*RRPAPA
Trigger: CGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCT...TCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR CAA 90 bp GACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGACGCAGGGGCTGGGTACCCACGGGATCGGTaGTCTGACGACTTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: DVCTSTVGRTAQMDAGAGYPRDR*SDDLPA
Trigger: GGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTA...CCCAGCCCCTGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320936.9
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
CDS-3UTR CAA 90 bp CACCTAGCTGACTGCCCAGCGGGCCCTCGCTCTCCCTTGCCTTTTTGGTCAGTCGTTCCCAGGGTGGCGTaGACACGCACCTGCGCACAC +
Preference number: 5 (lower is better)
Translates to: HLADCPAGPRSPLPFWSVVPRVA*TRTCAH
Trigger: GTGTGCGCAGGTGCGTGTCAACGCCACCCTGGGAAC...GACTGACCAAAAAGGCAAGGGAGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586548.5
CDS CCA 90 bp CCTCCTCCTGCCTGGTCTACTCGGATCTGCCGTCCATCTACAGACTaGAGACAGAGGGCGGGACGGGTTAGCAGGTGGGTGCCCCATCCT +
Preference number: 5 (lower is better)
Translates to: PPPAWSTRICRPSTD*RQRAGRVSRWVPHP
Trigger: AGGATGGGGCACCCACCTGCTAACCCGTCCCGCCCTCTGTCTCCAGTCTGTAGATGGACGGCAGATCCGAGTAGACCAGGCAGGAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590347.5
ENST00000591055.5
CDS CCA 90 bp CGGTGCCCAAGACGCTCTCTGGACCGCACTGCTTCATCTGAGAGGTaGGCATGCCAGCAGCACCTCCTGGGGTTAGAGGCGCACAGGGAA +
Preference number: 5 (lower is better)
Translates to: RCPRRSLDRTASSER*ACQQHLLGLEAHRE
Trigger: TTCCCTGTGCGCCTCTAACCCCAGGAGGTGCTGCTGGCATGCCCACCTCTCAGATGAAGCAGTGCGGTCCAGAGAGCGTCTTGGGCACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000589161.1
ENST00000591622.1
ENST00000592467.1
CDS-3UTR CAA 90 bp TGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCGGCCCTCGCTCTCCCTaGCCTTTTTGGTCAGTCTCA +
Preference number: 5 (lower is better)
Translates to: CRTRPSSGHCSHHSDSGCGPRSP*PFWSVS
Trigger: TGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGCC...GCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591097.5
CDS-3UTR CAA 90 bp ACCGGCTGGCCGTCTGAGGTCGCCCTGGGATGCCACGTGCCTCTGCTCTCTGGCTCTCAGAGGGTTCTGTaGGGCGCACAACACTTCTGT +
Preference number: 5 (lower is better)
Translates to: TGWPSEVALGCHVPLLSGSQRVL*GAQHFC
Trigger: ACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGA...GCCAGAGAGCAGAGGCACGTGGCATCCCAGGGCGACCTCAGACGGCCAGCCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CAA 90 bp CCCTTCCCCGAGTCCTGGCCGGGCCCCTTCAACCGTAACTGTCATAACTGTCTCCAGGGCTCCACATCGTaGTGGGCAAGGACTGGCCGC +
Preference number: 5 (lower is better)
Translates to: PFPESWPGPFNRNCHNCLQGSTS*WARTGR
Trigger: GCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTG...GAGACAGTTATGACAGTTACGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591376.5
CDS TCA 90 bp GCCCAAGGTACCCTGCGGAGTCCTAGGTCCTCCCAGTCGGCCTGGTaGTCTCCCTGCAGCAAGCCACACAGATGTGAGACTCCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: AQGTLRSPRSSQSAW*SPCSKPHRCETPGR
Trigger: CCTTCCTGGAGTCTCACATCTGTGTGGCTTGCTGCAGGGAGATCACCAGGCCGACTGGGAGGACCTAGGACTCCGCAGGGTACCTTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588030.5
CDS GCA 90 bp CCAAGACGCTCTCTGGACCGCACTGCTTCATCTGAGAGGTGGGCATaGCAGCAGCACCTCCTGGGGTTAGAGGCGCACAGGGAAGACCTG +
Preference number: 5 (lower is better)
Translates to: PRRSLDRTASSERWA*QQHLLGLEAHREDL
Trigger: CAGGTCTTCCCTGTGCGCCTCTAACCCCAGGAGGTGCTGCTGGCATGCCCACCTCTCAGATGAAGCAGTGCGGTCCAGAGAGCGTCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000589161.1
ENST00000591622.1
ENST00000592467.1
CDS-3UTR CAA 90 bp GGGGCTCCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGATCTGTCCGTACTTaGAGAAGACCTGCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: GAPGQLLPHPPGSYHTTLRSVRT*RRPAPA
Trigger: CGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCT...GAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CAA 90 bp ACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCTATAGTCGGTTGTCTGACGACTaGCCTGCCTGGTCTACTCGG +
Preference number: 5 (lower is better)
Translates to: TRPSSGHCSHHSDSGCYSRLSDD*PAWSTR
Trigger: CCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCG...ACTATAGCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR CAA 90 bp AGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTTACCCACGGGATCGGTaGTCTGACGACTTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: SLLGKRLPPALVPGEVPPYPRDR*SDDLPA
Trigger: GGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTA...AGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
ENST00000591935.5
CDS-3UTR CAA 90 bp CCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACTACCCACGGGATCGGTaGTCTGACGACTTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: PGQLLPHPPGSYHTTLRNYPRDR*SDDLPA
Trigger: GGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTA...GTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320936.9
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
CDS-3UTR CAA 90 bp ACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCTATAGTTACCCACGGGATCGGTaGTCTGACGACTTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: TRPSSGHCSHHSDSGCYSYPRDR*SDDLPA
Trigger: GGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTA...ACTATAGCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR CAA 90 bp AGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCATTGGAAGGACGATCTaGAGCAGGAAGGGTTTTTAC +
Preference number: 5 (lower is better)
Translates to: SCRRTAARAPGETRGPEPIGRTI*SRKGFY
Trigger: GTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAAT...GGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CAA 90 bp TGCTCAGCTTCCGACAAAGAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGGGGGCTCCAGGGCAGTaGCTGCCACACCCGCCGGGG +
Preference number: 5 (lower is better)
Translates to: CSASDKERIHSPFDLREVGAPGQ*LPHPPG
Trigger: CCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCC...CACTTCTCTGAGATCGAACGGACTGTGAATCCGCTCTTTGTCGGAAGCTGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CAA 90 bp AAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGATTTGGTCAGTCTCATTaGGCTTTTGCGTCCTGCGAT +
Preference number: 5 (lower is better)
Translates to: KDWPPRKLPAHRSPCSRRFGQSH*AFASCD
Trigger: ATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAA...TCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CAA 90 bp GGGAGGCGCTGCCCTGCACCCAACACACACCGAAAGGCGCCCGCCATGGGGCCATTTGGTCAGTCTCATTaGGCTTTTGCGTCCTGCGAT +
Preference number: 5 (lower is better)
Translates to: GRRCPAPNTHRKAPAMGPFGQSH*AFASCD
Trigger: ATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAA...TGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587896.6
CDS-3UTR CAA 90 bp AGCTCCCCCAGGGACCTGGGACCCGGGACGGAAGCTGGCCATCCCGCAACCACCTTTGGTCAGTCTCATTaGGCTTTTGCGTCCTGCGAT +
Preference number: 5 (lower is better)
Translates to: SSPRDLGPGTEAGHPATTFGQSH*AFASCD
Trigger: ATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAA...GGTGGTTGCGGGATGGCCAGCTTCCGTCCCGGGTCCCAGGTCCCTGGGGGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591097.5
CDS-3UTR CAA 90 bp TGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAAGGGTTTTTACTCGTaGTGTGTAGCTGAGGACAAG +
Preference number: 5 (lower is better)
Translates to: WPPRKLPAHRSPCSRRDSKGFYS*CVAEDK
Trigger: CTTGTCCTCAGCTACACACAACGAGTAAAAACCCTT...CGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CAA 90 bp GCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCATCTCAGAGGGTTCTGTaGGGCGCACAACACTTCTGT +
Preference number: 5 (lower is better)
Translates to: APGETRGPEPAPHWRSASSQRVL*GAQHFC
Trigger: ACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGA...TGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000444172.6
ENST00000587169.5
ENST00000590347.5
ENST00000592234.5
CDS-3UTR CAA 90 bp AGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGGGCTGCCTCCAGCTCTaGTTCCAGGTGAAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: RGQASWASGCLQLLFQVKGCLQL*FQVKSL
Trigger: GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCC...CTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
ENST00000592234.5
CDS-3UTR CAA 90 bp AGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGCTGCCTCCAGCTCTaGTTCCAGGTGAAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: SLLGKRLPPALVPGEVPPGCLQL*FQVKSL
Trigger: GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCC...AGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
ENST00000592234.5
CDS-3UTR CAA 90 bp ACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTGACTTACCAAGACAGACAAACGTaGAGTACCGGAAGGTACCCG +
Preference number: 5 (lower is better)
Translates to: TELPPQATAAWRPRSVTYQDRQT*STGRYP
Trigger: CGGGTACCTTCCGGTACTCAACGTTTGTCTGTCTTG...GTAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591097.5
CDS GCA 90 bp CGGCAGAGCCACCACGGTACCCACGGGATCGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGATCTGCCGTCCATCTACAGACTGGA +
Preference number: 5 (lower is better)
Translates to: RQSHHGTHGIGCLTT*LPGLLGSAVHLQTG
Trigger: TCCAGTCTGTAGATGGACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTACCGTGGTGGCTCTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000590704.5
ENST00000593093.5
ENST00000593128.5
ENST00000593283.5
CDS-3UTR CAA 90 bp GACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGACGCAGGGGCTGGGAGATCTGTCCGTACTTaGAGAAGACCTGCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: DVCTSTVGRTAQMDAGAGRSVRT*RRPAPA
Trigger: CGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCT...CCCAGCCCCTGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CAA 90 bp CTGCACCCAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAAGATCTGTCCGTACTTaGAGAAGACCTGCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: LHPTHTERRPPWGHRCGRRSVRT*RRPAPA
Trigger: CGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCT...TCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CAA 90 bp CTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGCGGTTGTCTGACGACTaGCCTGCCTGGTCTACTCGG +
Preference number: 5 (lower is better)
Translates to: LPPALVPGEVPPGTVTPERLSDD*PAWSTR
Trigger: CCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCG...CTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
ENST00000591935.5
CDS-3UTR CAA 90 bp GGGACAGGGCTCAGCGCCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACACGGTTGTCTGACGACTaGCCTGCCTGGTCTACTCGG +
Preference number: 5 (lower is better)
Translates to: GTGLSATCHSSRKHLQGTRLSDD*PAWSTR
Trigger: CCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCG...TGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGCGCTGAGCCCTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CAA 90 bp CGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTCGGTTGTCTGACGACTaGCCTGCCTGGTCTACTCGG +
Preference number: 5 (lower is better)
Translates to: RKHLQGTSLLGKRLPPALRLSDD*PAWSTR
Trigger: CCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCG...AAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
CDS-3UTR CAA 90 bp CATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTACCCACGGGATCGGTaGTCTGACGACTTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: HATLPESTYRGQASWASGYPRDR*SDDLPA
Trigger: GGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTA...GCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
CDS-3UTR CAA 90 bp GAGGGCACCAAGGTGAACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCAGTCTCATTTGGCTTTaGCGTCCTGCGATAGAAATG +
Preference number: 5 (lower is better)
Translates to: EGTKVNRAPTAGHSSVAPSLIWL*RPAIEM
Trigger: CATTTCTATCGCAGGACGCAAAAGCCAAATGAGACT...GGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CAA 90 bp CAGCGCCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGGGCTGCCTCCAGCTCTaGTTCCAGGTGAAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: QRHMPLFPKALTGDKPPGGCLQL*FQVKSL
Trigger: GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCC...CCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGCGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
CDS-3UTR CAA 90 bp TCTGGGTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATGGGCGGGTCTGCACCTaGGCGCAGCTGGAGCCAGCT +
Preference number: 5 (lower is better)
Translates to: SGCTRGPLFESDFHRAPHGRVCT*AQLEPA
Trigger: AGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCCC...ATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCACCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS GCA 90 bp CGGCAGAGCCACCACGGTACCCACGGGATCGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGATCTGCCGTCCATCTACAGACTTCA +
Preference number: 5 (lower is better)
Translates to: RQSHHGTHGIGCLTT*LPGLLGSAVHLQTS
Trigger: TGAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTACCGTGGTGGCTCTGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587169.5
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS CCA 90 bp CTCCAGAGGCCAGGCTGCACAAACACCTTGGCTAGTCTCCCCACCTaGCACAGGCCCTGTTCACTCCAACCACTGCCTTCTCTGAGCACA +
Preference number: 5 (lower is better)
Translates to: LQRPGCTNTLASLPT*HRPCSLQPLPSLST
Trigger: TGTGCTCAGAGAAGGCAGTGGTTGGAGTGAACAGGGCCTGTGCCAGGTGGGGAGACTAGCCAAGGTGTTTGTGCAGCCTGGCCTCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589161.1
CDS-3UTR CAA 90 bp AGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTCATGGGGCCAACCCTACCCACGGGATCGGTaGTCTGACGACTTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: SPFDLREVSGAPTSWGQPYPRDR*SDDLPA
Trigger: GGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTA...GGGTTGGCCCCATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320936.9
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
CDS-3UTR CAA 90 bp ATAACTGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGTACCCACGGGATCGGTaGTCTGACGACTTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: ITVSVGPARAPVTVATTLYPRDR*SDDLPA
Trigger: GGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTA...CAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACAGTTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591097.5
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR CAA 90 bp GCTCAGCGCCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGCTGCCTCCAGCTCTaGTTCCAGGTGAAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: AQRHMPLFPKALTGDKPPGCLQL*FQVKSL
Trigger: GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCC...AGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGCGCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
CDS CCA 90 bp GCTCCACGCAGCGCCAGGCTTTCCTTGTTGTTTGCTTCCTTGATGTaGCAGTCCACATGGAATCATCCCGTATGCAGGCCGGGAGCGCTG +
Preference number: 5 (lower is better)
Translates to: APRSARLSLLFASLM*QSTWNHPVCRPGAL
Trigger: CAGCGCTCCCGGCCTGCATACGGGATGATTCCATGTGGACTGCCACATCAAGGAAGCAAACAACAAGGAAAGCCTGGCGCTGCGTGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000589161.1
ENST00000591622.1
ENST00000592051.1
ENST00000592467.1
CDS CCA 90 bp GCACCCTTCCCGCTTCCTACAACACTTGGCAAACTCCTGCTCCTTTaGCAAAGCCTCAGCCCCAAAGTCCCCCTCCTCCTAGCCTCCTGT +
Preference number: 5 (lower is better)
Translates to: APFPLPTTLGKLLLL*QSLSPKVPLLLASC
Trigger: ACAGGAGGCTAGGAGGAGGGGGACTTTGGGGCTGAGGCTTTGCCAAAGGAGCAGGAGTTTGCCAAGTGTTGTAGGAAGCGGGAAGGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000588411.5
ENST00000591622.1
ENST00000592467.1
CDS-3UTR CAA 90 bp CCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTCATCGCTGCTCTCAGGTCCAGCGACTGCTCATaGGTGTCAAAACTCAGCCCT +
Preference number: 5 (lower is better)
Translates to: PGEVPPGTVTPEVIAALRSSDCS*VSKLSP
Trigger: AGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGGA...CCTGAGAGCAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
CDS-3UTR CAA 90 bp CGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCAGATCTGTCCGTACTTaGAGAAGACCTGCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: RIRLSQGSTSLWARTGRPRSVRT*RRPAPA
Trigger: CGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCT...GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR CAA 90 bp CGCCTCTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTAGATCTGTCCGTACTTaGAGAAGACCTGCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: RLLQGTSLLGKRLPPALVRSVRT*RRPAPA
Trigger: CGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCT...AACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585914.5
CDS-3UTR CAA 90 bp CTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAAGATCTGTCCGTACTTaGAGAAGACCTGCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: LGKRLPPALVPGEVPPGTRSVRT*RRPAPA
Trigger: CGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCT...TGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
CDS-3UTR CAA 90 bp CACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGAGTTGGAAACGGTTGTCTGACGACTaGCCTGCCTGGTCTACTCGG +
Preference number: 5 (lower is better)
Translates to: HPPGSYHTTLRNVTRSWKRLSDD*PAWSTR
Trigger: CCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCG...TTTCCAACTCCGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320936.9
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
CDS-3UTR CAA 90 bp CTGCGGCCACACATGCACCTAGCTGACTGCCCAGCGGGCCCTCGCTCTCCCTTGATTGGAAGGACGATCTaGAGCAGGAAGGGTTTTTAC +
Preference number: 5 (lower is better)
Translates to: LRPHMHLADCPAGPRSPLIGRTI*SRKGFY
Trigger: GTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAAT...CAAGGGAGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGTGGCCGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CAA 90 bp GGGGCTCCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCATTGGAAGGACGATCTaGAGCAGGAAGGGTTTTTAC +
Preference number: 5 (lower is better)
Translates to: GAPGQLLPHPPGSYHTTLIGRTI*SRKGFY
Trigger: GTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAAT...GAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CAA 90 bp AAGGTGAACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTATTGGAAGGACGATCTaGAGCAGGAAGGGTTTTTAC +
Preference number: 5 (lower is better)
Translates to: KVNRAPTAGHSSVAPSECIGRTI*SRKGFY
Trigger: GTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAAT...ACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CAA 90 bp CTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTCTCAGAGGGTTCTGTaGGGCGCACAACACTTCTGT +
Preference number: 5 (lower is better)
Translates to: LTGDKPPGQAAASSSCSRSQRVL*GAQHFC
Trigger: ACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGA...CCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585914.5
ENST00000587896.6
CDS-3UTR CAA 90 bp CCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGACGCATCTCAGAGGGTTCTGTaGGGCGCACAACACTTCTGT +
Preference number: 5 (lower is better)
Translates to: PLRDVCTSTVGRTAQMDASQRVL*GAQHFC
Trigger: ACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGA...TGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CAA 90 bp CGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCATCTCAGAGGGTTCTGTaGGGCGCACAACACTTCTGT +
Preference number: 5 (lower is better)
Translates to: RLPPALVPGEVPPGTVTPSQRVL*GAQHFC
Trigger: ACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGA...TGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
ENST00000592234.5
CDS-3UTR CAA 90 bp ATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCGGCTGCCTCCAGCTCTaGTTCCAGGTGAAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: IRIRLSQGSTSLWARTGRGCLQL*FQVKSL
Trigger: GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCC...GCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CAA 90 bp GCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACCAGGGCTCCACATCGTaGTGGGCAAGGACTGGCCGC +
Preference number: 5 (lower is better)
Translates to: ALYSNPTFTGLHIVVGKDQGSTS*WARTGR
Trigger: GCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTG...GTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CAA 90 bp GCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGATGCAATGCAAGGGAATaGTCAGAGCAAGGTTCATTT +
Preference number: 5 (lower is better)
Translates to: AARAPGETRGPEPAPHWRCNARE*SEQGSF
Trigger: AAATGAACCTTGCTCTGACAATTCCCTTGCATTGCA...TCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CAA 90 bp ATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGATCTGTCCGTACTTaGAGAAGACCTGCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: IRLSQGSTSLWARTGRPVRSVRT*RRPAPA
Trigger: CGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCT...TACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR CAA 90 bp CTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGAGATCTGTCCGTACTTaGAGAAGACCTGCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: LPPALVPGEVPPGTVTPERSVRT*RRPAPA
Trigger: CGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCT...CTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
CDS-3UTR CAA 90 bp CCAAAGCAAAGCAGCGTTACTCCCAACGTCCTCCACAGGGCTCACAGCTGCCCCAGATCTGTCCGTACTTaGAGAAGACCTGCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: PKQSSVTPNVLHRAHSCPRSVRT*RRPAPA
Trigger: CGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCT...GGGGCAGCTGTGAGCCCTGTGGAGGACGTTGGGAGTAACGCTGCTTTGCTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CAA 90 bp GCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCTATAGTAGTCAGATCTGTCCGTACTTaGAGAAGACCTGCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: ARAPVTVATTLTPAAIVVRSVRT*RRPAPA
Trigger: CGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCT...GACTACTATAGCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR CAA 90 bp CGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTAGATCTGTCCGTACTTaGAGAAGACCTGCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: RKHLQGTSLLGKRLPPALRSVRT*RRPAPA
Trigger: CGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCT...AAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
CDS-3UTR CAA 90 bp AGAGGACAGATGCGCCTCTTCTGGGCAAGCACAGTGACAAGGTCTGAGTGTCCACGGTTGTCTGACGACTaGCCTGCCTGGTCTACTCGG +
Preference number: 5 (lower is better)
Translates to: RGQMRLFWASTVTRSECPRLSDD*PAWSTR
Trigger: CCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCG...TGGACACTCAGACCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTGTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000591097.5
CDS-3UTR CAA 90 bp GAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTCATACCCACGGGATCGGTaGTCTGACGACTTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: ERIHSPFDLREVSGAPTSYPRDR*SDDLPA
Trigger: GGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTA...TGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320936.9
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
CDS-3UTR CAA 90 bp CTGGGTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCTACCCACGGGATCGGTaGTCTGACGACTTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: LGAHVALYSNPTFTGLHIYPRDR*SDDLPA
Trigger: GGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTA...GATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
CDS-3UTR CAA 90 bp CTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCATTGGAAGGACGATCTaGAGCAGGAAGGGTTTTTAC +
Preference number: 5 (lower is better)
Translates to: LCRTRPSSGHCSHHSDSGIGRTI*SRKGFY
Trigger: GTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAAT...GCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000587169.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CAA 90 bp CGAGGCCATCCCGGCGTCAGAAGCGGTCAGGCTGGGTTTGACAAGATCAGAACCGCGGTCAGGCTGGGTTaGACAAGATCAGAACCGAAA +
Preference number: 5 (lower is better)
Translates to: RGHPGVRSGQAGFDKIRTAVRLG*TRSEPK
Trigger: TTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGC...GGTTCTGATCTTGTCAAACCCAGCCTGACCGCTTCTGACGCCGGGATGGCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
CDS-3UTR CAA 90 bp CCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGAGTTGGGCGGTCAGGCTGGGTTaGACAAGATCAGAACCGAAA +
Preference number: 5 (lower is better)
Translates to: PHPPGSYHTTLRNVTRSWAVRLG*TRSEPK
Trigger: TTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGC...CCAACTCCGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CAA 90 bp AGGGAGCAGCTTGCGTCTCAGAGGGTTCTGTTGGGCGCACAACACTTCTGTCCTGGCCCTCGCTCTCCCTaGCCTTTTTGGTCAGTCTCA +
Preference number: 5 (lower is better)
Translates to: REQLASQRVLLGAQHFCPGPRSP*PFWSVS
Trigger: TGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGCC...AGGACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGACGCAAGCTGCTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CAA 90 bp CCCCGGCAGAGCCACCACGGTACCCACGGGATCGGTTGTCTGACGACTTGCCTGCAGCAGGGCAGCATCTaGGAAATTGTTCAAAATCTC +
Preference number: 5 (lower is better)
Translates to: PRQSHHGTHGIGCLTTCLQQGSI*EIVQNL
Trigger: GAGATTTTGAACAATTTCCAAGATGCTGCCCTGCTG...CAGGCAAGTCGTCAGACAACCGATCCCGTGGGTACCGTGGTGGCTCTGCCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591097.5
CDS TCA 90 bp CGCGGGCCCAGCAGCAGCCTCACCTTCAGAGATCTGTCCGTACTTTaGGAAGACCTGCTCCAGCGACTGCTCATTGGTGTCAAAACTCAG +
Preference number: 5 (lower is better)
Translates to: RGPSSSLTFRDLSVL*EDLLQRLLIGVKTQ
Trigger: CTGAGTTTTGACACCAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCTCTGAAGGTGAGGCTGCTGCTGGGCCCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593093.5
CDS TCA 90 bp AGACAGCTCCACGCAGCGCCAGGCTTTCCTTGTTGTTTGCTTCCTTaGTGTGGCAGTCCACATGGAATCATCCCGTATGCAGGCCGGGAG +
Preference number: 5 (lower is better)
Translates to: RQLHAAPGFPCCLLP*CGSPHGIIPYAGRE
Trigger: CTCCCGGCCTGCATACGGGATGATTCCATGTGGACTGCCACATCAAGGAAGCAAACAACAAGGAAAGCCTGGCGCTGCGTGGAGCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000589161.1
ENST00000591622.1
ENST00000592051.1
ENST00000592467.1
CDS-3UTR CAA 90 bp GTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGCGGTTGTCTGACGACTaGCCTGCCTGGTCTACTCGG +
Preference number: 5 (lower is better)
Translates to: VALYSNPTFTGLHIVVGKRLSDD*PAWSTR
Trigger: CCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCG...CTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
CDS-3UTR CAA 90 bp CACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGTACCCACGGGATCGGTaGTCTGACGACTTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: HTWPFIRIRLSQGSTSLWYPRDR*SDDLPA
Trigger: GGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTA...CCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
CDS-3UTR CAA 90 bp CTTGCGTCTCAGAGGGTTCTGTTGGGCGCACAACACTTCTGTCCTCCGAGGGCTGCGGTCAGGCTGGGTTaGACAAGATCAGAACCGAAA +
Preference number: 5 (lower is better)
Translates to: LASQRVLLGAQHFCPPRAAVRLG*TRSEPK
Trigger: TTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGC...AGCCCTCGGAGGACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGACGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CAA 90 bp CGCCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGTCAGGCTGGGTTaGACAAGATCAGAACCGAAA +
Preference number: 5 (lower is better)
Translates to: RHMPLFPKALTGDKPPGQAVRLG*TRSEPK
Trigger: TTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGC...TTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587896.6
CDS-3UTR CAA 90 bp CAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGCGGTCAGGCTGGGTTaGACAAGATCAGAACCGAAA +
Preference number: 5 (lower is better)
Translates to: QEPLRDVCTSTVGRTAQMAVRLG*TRSEPK
Trigger: TTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGC...CATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CAA 90 bp CAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACAGGGGCTCCAGGGCAGTaGCTGCCACACCCGCCGGGG +
Preference number: 5 (lower is better)
Translates to: QNRNDYESGNTRRCIYYTGAPGQ*LPHPPG
Trigger: CCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCC...TGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CAA 90 bp CTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAGGGGCTCCAGGGCAGTaGCTGCCACACCCGCCGGGG +
Preference number: 5 (lower is better)
Translates to: LRKWEYKEVHLLHINVQRGAPGQ*LPHPPG
Trigger: CCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCC...TCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CAA 90 bp GAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTCAGGCCCTCGCTCTCCCTaGCCTTTTTGGTCAGTCTCA +
Preference number: 5 (lower is better)
Translates to: ERIHSPFDLREVSGAPTSGPRSP*PFWSVS
Trigger: TGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGCC...TGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CAA 90 bp CACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCGGCCCTCGCTCTCCCTaGCCTTTTTGGTCAGTCTCA +
Preference number: 5 (lower is better)
Translates to: HVALYSNPTFTGLHIVVGGPRSP*PFWSVS
Trigger: TGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGCC...GCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CAA 90 bp GCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCTGCCTCCAGCTCTaGTTCCAGGTGAAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: AHVALYSNPTFTGLHIVVGCLQL*FQVKSL
Trigger: GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCC...CACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CAA 90 bp AACCACAGACTCGGCTTTCTGGGTGCACACGTGGCCCTTTATTCGAATCCGACTGGCTGCCTCCAGCTCTaGTTCCAGGTGAAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: NHRLGFLGAHVALYSNPTGCLQL*FQVKSL
Trigger: GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCC...AGTCGGATTCGAATAAAGGGCCACGTGTGCACCCAGAAAGCCGAGTCTGTGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586636.5
ENST00000591376.5
CDS-3UTR CAA 90 bp AGGACGATCTTGAGCAGGAAGGGTTTTTACTCGTTGTGTGTAGCTGAGGACAAGGGCCCCAGGGAAGGCTaGCAGACCCGCTGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: RTILSRKGFYSLCVAEDKGPREG*QTRCFS
Trigger: GGAGAAGCAGCGGGTCTGCAAGCCTTCCCTGGGGCC...CTTGTCCTCAGCTACACACAACGAGTAAAAACCCTTCCTGCTCAAGATCGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR CAA 90 bp GGTCAGGCTGGGTTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAACCACCCCTGTGCTaGGGCCGGCCTCCCCCTCAC +
Preference number: 5 (lower is better)
Translates to: GQAGFDKIRTEMTTKVGIQPPLC*GRPPPH
Trigger: GTGAGGGGGAGGCCGGCCCAAGCACAGGGGTGGTTG...TATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591097.5
CDS TCA 90 bp ATTGGTGTCAAAACTCAGCCCTCCAACAAAAAGTTTGCCTTCATCTaGTGCCATGGCGGCTACGAGCGGGTTCCTGGGTGCGGGCTCCGT +
Preference number: 5 (lower is better)
Translates to: IGVKTQPSNKKFAFI*CHGGYERVPGCGLR
Trigger: ACGGAGCCCGCACCCAGGAACCCGCTCGTAGCCGCCATGGCATCAGATGAAGGCAAACTTTTTGTTGGAGGGCTGAGTTTTGACACCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585913.5
ENST00000586548.5
CDS CCA 90 bp ATAAACATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTaGGGCGCACAGCACAGATGGACGCAGGGGCTGGTCTACTCGGAT +
Preference number: 5 (lower is better)
Translates to: INIFKNLSGTSARLL*GAQHRWTQGLVYSD
Trigger: ATCCGAGTAGACCAGCCCCTGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588344.2
CDS-3UTR CAA 90 bp ATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATCTGTCCGTACTTaGAGAAGACCTGCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: IFKNLSGTSARLLWGAQHRSVRT*RRPAPA
Trigger: CGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCT...GTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CAA 90 bp GCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCTATAGTAGTCTCTGGAAGATCTGTCCGTACTTaGAGAAGACCTGCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: APVTVATTLTPAAIVVSGRSVRT*RRPAPA
Trigger: CGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCT...TCCAGAGACTACTATAGCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR CAA 90 bp AAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTGGGGCTCCAGGGCAGTaGCTGCCACACCCGCCGGGG +
Preference number: 5 (lower is better)
Translates to: KIRTEMTTKVGIQGGAFTGAPGQ*LPHPPG
Trigger: CCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCC...AGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CAA 90 bp ACACGGTCTTTTAATCGGCTTCGTAAAGCCAAAGAAAACTGCGTACAAGAATTCGGGGCTCCAGGGCAGTaGCTGCCACACCCGCCGGGG +
Preference number: 5 (lower is better)
Translates to: TRSFNRLRKAKENCVQEFGAPGQ*LPHPPG
Trigger: CCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCC...GAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAGCCGATTAAAAGACCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CAA 90 bp ACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTTTTGGTCAGTCTCATTaGGCTTTTGCGTCCTGCGAT +
Preference number: 5 (lower is better)
Translates to: TSLLGKRLPPALVPGEVPFGQSH*AFASCD
Trigger: ATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAA...AGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CAA 90 bp CCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCTGCCTCCAGCTCTaGTTCCAGGTGAAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: PFIRIRLSQGSTSLWARTGCLQL*FQVKSL
Trigger: GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCC...AGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CAA 90 bp TTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTCTTGGCTGCCTCCAGCTCTaGTTCCAGGTGAAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: LAFASCDRNGSERTDAPLGCLQL*FQVKSL
Trigger: GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCC...AAGAGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR CAA 90 bp GAAATGGCTCTGAGAGGACAGATGCGCCTCTTCTGGGCAAGCACAGTGACAAGGAGATCTGTCCGTACTTaGAGAAGACCTGCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: EMALRGQMRLFWASTVTRRSVRT*RRPAPA
Trigger: CGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCT...CCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTGTCCTCTCAGAGCCATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CAA 90 bp TGTAGCGTAACTGTCATAACTGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTAGATCTGTCCGTACTTaGAGAAGACCTGCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: CSVTVITVSVGPARAPVTRSVRT*RRPAPA
Trigger: CGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCT...AGTGACCGGAGCTCGGGCGGGTCCTACAGAGACAGTTATGACAGTTACGCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591055.5
ENST00000593048.5
CDS-3UTR CAA 90 bp AGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTAGTCTCATTTGGCTTTaGCGTCCTGCGATAGAAATG +
Preference number: 5 (lower is better)
Translates to: RAVAATPAGVLPHYTQKRSLIWL*RPAIEM
Trigger: CATTTCTATCGCAGGACGCAAAAGCCAAATGAGACT...ACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CAA 90 bp GTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGAGTCTCATTTGGCTTTaGCGTCCTGCGATAGAAATG +
Preference number: 5 (lower is better)
Translates to: VAATPAGVLPHYTQKRHTSLIWL*RPAIEM
Trigger: CATTTCTATCGCAGGACGCAAAAGCCAAATGAGACT...CGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CAA 90 bp CCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGAGTTGGAAGGGTTTTTACTCGTaGTGTGTAGCTGAGGACAAG +
Preference number: 5 (lower is better)
Translates to: PHPPGSYHTTLRNVTRSWKGFYS*CVAEDK
Trigger: CTTGTCCTCAGCTACACACAACGAGTAAAAACCCTT...CCAACTCCGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CAA 90 bp TGGGTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTCTCAGAGGGTTCTGTaGGGCGCACAACACTTCTGT +
Preference number: 5 (lower is better)
Translates to: WVHTWPFIRIRLSQGSTSSQRVL*GAQHFC
Trigger: ACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGA...CGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000444172.6
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
ENST00000592234.5
CDS-3UTR CAA 90 bp GGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACACAGGGCTCCACATCGTaGTGGGCAAGGACTGGCCGC +
Preference number: 5 (lower is better)
Translates to: GNTRRCIYYTLTFSEAPTQGSTS*WARTGR
Trigger: GCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTG...TGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CAA 90 bp AGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTGCAATGCAAGGGAATaGTCAGAGCAAGGTTCATTT +
Preference number: 5 (lower is better)
Translates to: RGQASWASGCLQLLFQVKCNARE*SEQGSF
Trigger: AAATGAACCTTGCTCTGACAATTCCCTTGCATTGCA...CTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS TCA 90 bp ATTGGTGTCAAAACTCAGCCCTCCAACAAAAAGTTTGCCTTCATCTaGTGCCATGGCGGCCTGGCGCACCCTTCCCGCTTCCTACAACAC +
Preference number: 5 (lower is better)
Translates to: IGVKTQPSNKKFAFI*CHGGLAHPSRFLQH
Trigger: GTGTTGTAGGAAGCGGGAAGGGTGCGCCAGGCCGCCATGGCATCAGATGAAGGCAAACTTTTTGTTGGAGGGCTGAGTTTTGACACCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588411.5
CDS-3UTR CAA 90 bp CTTGCCTGCCTGGTCTACTCGGATCTGCCGTCCATCTACAGACTTCCCATTCATAGATCTGTCCGTACTTaGAGAAGACCTGCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: LACLVYSDLPSIYRLPIHRSVRT*RRPAPA
Trigger: CGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCT...ATGAATGGGAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCAGGCAGGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
CDS-3UTR CAA 90 bp CGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGCGGTCAGGCTGGGTTaGACAAGATCAGAACCGAAA +
Preference number: 5 (lower is better)
Translates to: RGPLFESDFHRAPHRCGQAVRLG*TRSEPK
Trigger: TTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGC...TTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CAA 90 bp AGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACAGTCTCATTTGGCTTTaGCGTCCTGCGATAGAAATG +
Preference number: 5 (lower is better)
Translates to: SCCHTRRGPTTLHSETSHSLIWL*RPAIEM
Trigger: CATTTCTATCGCAGGACGCAAAAGCCAAATGAGACT...GTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CAA 90 bp ATAACTGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGAGTCTCATTTGGCTTTaGCGTCCTGCGATAGAAATG +
Preference number: 5 (lower is better)
Translates to: ITVSVGPARAPVTVATTLSLIWL*RPAIEM
Trigger: CATTTCTATCGCAGGACGCAAAAGCCAAATGAGACT...CAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACAGTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CAA 90 bp GGTCAGGCTGGGTTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACGGTTGTCTGACGACTaGCCTGCCTGGTCTACTCGG +
Preference number: 5 (lower is better)
Translates to: GQAGFDKIRTEMTTKVGIRLSDD*PAWSTR
Trigger: CCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCG...TATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CAA 90 bp CAAGGAGTGTGTGGTGCAATGCAAGGGAATTGTCAGAGCAAGGTTCATTTCACACGGTTGTCTGACGACTaGCCTGCCTGGTCTACTCGG +
Preference number: 5 (lower is better)
Translates to: QGVCGAMQGNCQSKVHFTRLSDD*PAWSTR
Trigger: CCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCG...TGTGAAATGAACCTTGCTCTGACAATTCCCTTGCATTGCACCACACACTCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000587896.6
CDS-3UTR CAA 90 bp ATAAATAAACATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGGTTGTCTGACGACTaGCCTGCCTGGTCTACTCGG +
Preference number: 5 (lower is better)
Translates to: INKHLQEPLRDVCTSTVGRLSDD*PAWSTR
Trigger: CCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCG...CCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTATTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320936.9
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
CDS-3UTR CAA 90 bp TGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACTACCCACGGGATCGGTaGTCTGACGACTTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: WEYKEVHLLHINVQRSSHYPRDR*SDDLPA
Trigger: GGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTA...GTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320936.9
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CAA 90 bp GCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTCTTCTGGGCAAGAAGGGTTTTTACTCGTaGTGTGTAGCTGAGGACAAG +
Preference number: 5 (lower is better)
Translates to: ASCDRNGSERTDAPLLGKKGFYS*CVAEDK
Trigger: CTTGTCCTCAGCTACACACAACGAGTAAAAACCCTT...CTTGCCCAGAAGAGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CAA 90 bp CTTTTTGGTCAGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGGGCTGCCTCCAGCTCTaGTTCCAGGTGAAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: LFGQSHLAFASCDRNGSEGCLQL*FQVKSL
Trigger: GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCC...CTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR CAA 90 bp AGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAAGGCCCCAGGGAAGGCTaGCAGACCCGCTGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: RRCIYYTLTFSEAPTIFKGPREG*QTRCFS
Trigger: GGAGAAGCAGCGGGTCTGCAAGCCTTCCCTGGGGCC...TTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CAA 90 bp GCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTCTTCTGTTTGGTCAGTCTCATTaGGCTTTTGCGTCCTGCGAT +
Preference number: 5 (lower is better)
Translates to: AFASCDRNGSERTDAPLLFGQSH*AFASCD
Trigger: ATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAA...CAGAAGAGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CAA 90 bp GGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAGGCCCTCGCTCTCCCTaGCCTTTTTGGTCAGTCTCA +
Preference number: 5 (lower is better)
Translates to: GNTRRCIYYTLTFSEAPTGPRSP*PFWSVS
Trigger: TGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGCC...TGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CAA 90 bp ACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTCGGTTGTCTGACGACTaGCCTGCCTGGTCTACTCGG +
Preference number: 5 (lower is better)
Translates to: TRRCIYYTLTFSEAPTIFRLSDD*PAWSTR
Trigger: CCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCG...AAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320936.9
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CAA 90 bp TACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATTGGATACCCACGGGATCGGTaGTCTGACGACTTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: YTLTFSEAPTIFKHTAIGYPRDR*SDDLPA
Trigger: GGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTA...TCCAATGGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320936.9
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CAA 90 bp CAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATACCCACGGGATCGGTaGTCTGACGACTTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: QNRNDYESGNTRRCIYYTYPRDR*SDDLPA
Trigger: GGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTA...TGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000320936.9
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CAA 90 bp ACACACAGCCATTGGAAGGACGATCTTGAGCAGGAAGGGTTTTTACTCGTTGTGGCGGTCAGGCTGGGTTaGACAAGATCAGAACCGAAA +
Preference number: 5 (lower is better)
Translates to: THSHWKDDLEQEGFLLVVAVRLG*TRSEPK
Trigger: TTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGC...CACAACGAGTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAATGGCTGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CAA 90 bp GCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACAGTCTCATTTGGCTTTaGCGTCCTGCGATAGAAATG +
Preference number: 5 (lower is better)
Translates to: ALYSNPTFTGLHIVVGKDSLIWL*RPAIEM
Trigger: CATTTCTATCGCAGGACGCAAAAGCCAAATGAGACT...GTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CAA 90 bp TGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTCTTCTGGGCAAGCACAGTAGTCTCATTTGGCTTTaGCGTCCTGCGATAGAAATG +
Preference number: 5 (lower is better)
Translates to: CDRNGSERTDAPLLGKHSSLIWL*RPAIEM
Trigger: CATTTCTATCGCAGGACGCAAAAGCCAAATGAGACT...ACTGTGCTTGCCCAGAAGAGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CAA 90 bp TTTTTGGTCAGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGCCCTCGCTCTCCCTaGCCTTTTTGGTCAGTCTCA +
Preference number: 5 (lower is better)
Translates to: FLVSLIWLLRPAIEMALRGPRSP*PFWSVS
Trigger: TGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGCC...TCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CAA 90 bp TGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTCTTCAAGGGTTTTTACTCGTaGTGTGTAGCTGAGGACAAG +
Preference number: 5 (lower is better)
Translates to: WLLRPAIEMALRGQMRLFKGFYS*CVAEDK
Trigger: CTTGTCCTCAGCTACACACAACGAGTAAAAACCCTT...GAAGAGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CAA 90 bp TGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTCTTCTGGGCAAGCACAGTAAGGGTTTTTACTCGTaGTGTGTAGCTGAGGACAAG +
Preference number: 5 (lower is better)
Translates to: CDRNGSERTDAPLLGKHSKGFYS*CVAEDK
Trigger: CTTGTCCTCAGCTACACACAACGAGTAAAAACCCTT...ACTGTGCTTGCCCAGAAGAGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CAA 90 bp GAGGACAAGAAGCAGGCACAGTGTAAAGGCACCGAAGCAACAAGAGGCAGCTTCGCAGCATCTTGGAAATaGTTCAAAATCTCCACCAGC +
Preference number: 5 (lower is better)
Translates to: EDKKQAQCKGTEATRGSFAASWK*FKISTS
Trigger: GCTGGTGGAGATTTTGAACAATTTCCAAGATGCTGC...GAAGCTGCCTCTTGTTGCTTCGGTGCCTTTACACTGTGCCTGCTTCTTGTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591097.5
CDS-3UTR CAA 90 bp TTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATTGGAAGGACGTCCAGCGACTGCTCATaGGTGTCAAAACTCAGCCCT +
Preference number: 5 (lower is better)
Translates to: LTFSEAPTIFKHTAIGRTSSDCS*VSKLSP
Trigger: AGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGGA...CGTCCTTCCAATGGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CAA 90 bp CTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGTATGCGTAGATCTGTCCGTACTTaGAGAAGACCTGCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: LRTRIPQPLQIQHRWSMRRSVRT*RRPAPA
Trigger: CGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCT...ACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CAA 90 bp TGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAGATCTGTCCGTACTTaGAGAAGACCTGCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: WEYKEVHLLHINVQRSSHRSVRT*RRPAPA
Trigger: CGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCT...GTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CAA 90 bp CCTCAGCCACTGCAAATACAACATCGATGGAGTATGCGTACGTCTTCCAGTAAAAGATCTGTCCGTACTTaGAGAAGACCTGCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: PQPLQIQHRWSMRTSSSKRSVRT*RRPAPA
Trigger: CGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCT...TTTACTGGAAGACGTACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CAA 90 bp ATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACATACCCACGGGATCGGTaGTCTGACGACTTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: IRTEMTTKVGIQGGAFTTYPRDR*SDDLPA
Trigger: GGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTA...TGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000320936.9
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CAA 90 bp ACACGGTCTTTTAATCGGCTTCGTAAAGCCAAAGAAAACTGCGTACAAGAATTCTACCCACGGGATCGGTaGTCTGACGACTTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: TRSFNRLRKAKENCVQEFYPRDR*SDDLPA
Trigger: GGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTA...GAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAGCCGATTAAAAGACCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320936.9
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
CDS-3UTR CAA 90 bp TGCTCAGCTTCCGACAAAGAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGATTGGAAGGACGATCTaGAGCAGGAAGGGTTTTTAC +
Preference number: 5 (lower is better)
Translates to: CSASDKERIHSPFDLREVIGRTI*SRKGFY
Trigger: GTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAAT...CACTTCTCTGAGATCGAACGGACTGTGAATCCGCTCTTTGTCGGAAGCTGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CAA 90 bp TTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATTGGAAGGACGGCGGTCAGGCTGGGTTaGACAAGATCAGAACCGAAA +
Preference number: 5 (lower is better)
Translates to: LTFSEAPTIFKHTAIGRTAVRLG*TRSEPK
Trigger: TTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGC...CGTCCTTCCAATGGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CAA 90 bp AGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCGCGGTCAGGCTGGGTTaGACAAGATCAGAACCGAAA +
Preference number: 5 (lower is better)
Translates to: SGNTRRCIYYTLTFSEAPAVRLG*TRSEPK
Trigger: TTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGC...GGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS TCA 90 bp ATTGGTGTCAAAACTCAGCCCTCCAACAAAAAGTTTGCCTTCATCTaGTGCCATGGCGGCCTGTGGCAGACACCAATGAAATCCTCAACA +
Preference number: 5 (lower is better)
Translates to: IGVKTQPSNKKFAFI*CHGGLWQTPMKSST
Trigger: TGTTGAGGATTTCATTGGTGTCTGCCACAGGCCGCCATGGCATCAGATGAAGGCAAACTTTTTGTTGGAGGGCTGAGTTTTGACACCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000585630.5
ENST00000586773.5
ENST00000589710.5
ENST00000590704.5
ENST00000592412.5
CDS CCA 90 bp AGATCTGTCCGTACTTTGAGAAGACCTGCTCCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTCCAACAAAAAGTTTGCCTTCATCTG +
Preference number: 5 (lower is better)
Translates to: RSVRTLRRPAPATAH*CQNSALQQKVCLHL
Trigger: CAGATGAAGGCAAACTTTTTGTTGGAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 35 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000585913.5
ENST00000585914.5
ENST00000586472.5
ENST00000586548.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000588230.5
ENST00000588411.5
ENST00000589235.5
ENST00000589266.5
ENST00000589686.5
ENST00000589710.5
ENST00000590171.1
ENST00000590347.5
ENST00000590704.5
ENST00000591055.5
ENST00000591097.5
ENST00000591376.5
ENST00000591659.5
ENST00000591935.5
ENST00000592412.5
ENST00000592815.5
ENST00000593048.5
ENST00000593093.5
ENST00000593128.5
ENST00000593283.5
ENST00000628979.2
CDS-3UTR CAA 90 bp TGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACACGGTTGTCTGACGACTaGCCTGCCTGGTCTACTCGG +
Preference number: 5 (lower is better)
Translates to: CIYYTLTFSEAPTIFKHTRLSDD*PAWSTR
Trigger: CCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCG...TGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000320936.9
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CAA 90 bp AAAAAGGACAATATAAATAAACATCTTCAAGAACCTCTCAGGGACGTCTGCACGCGGTTGTCTGACGACTaGCCTGCCTGGTCTACTCGG +
Preference number: 5 (lower is better)
Translates to: KKDNINKHLQEPLRDVCTRLSDD*PAWSTR
Trigger: CCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCG...CGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTATTTATATTGTCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320936.9
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
CDS-3UTR CAA 90 bp AACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTATACCCACGGGATCGGTaGTCTGACGACTTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: NRNDYESGNTRRCIYYTLYPRDR*SDDLPA
Trigger: GGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTA...TAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000320936.9
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CAA 90 bp ATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCGGCCCTCGCTCTCCCTaGCCTTTTTGGTCAGTCTCA +
Preference number: 5 (lower is better)
Translates to: IYYTLTFSEAPTIFKHTAGPRSP*PFWSVS
Trigger: TGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGCC...GGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CAA 90 bp TGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAACCTGCCTCTGCTCCTaGCCCAGCCAGTCTCATCTC +
Preference number: 5 (lower is better)
Translates to: CIYYTLTFSEAPTIFKHTTCLCS*PSQSHL
Trigger: GAGATGAGACTGGCTGGGCAAGGAGCAGAGGCAGGT...TGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591097.5
CDS-3UTR CAA 90 bp TACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATTGGAAGATCTGTCCGTACTTaGAGAAGACCTGCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: YTLTFSEAPTIFKHTAIGRSVRT*RRPAPA
Trigger: CGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCT...TCCAATGGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CAA 90 bp TACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTAGATCTGTCCGTACTTaGAGAAGACCTGCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: YKEVHLLHINVQRSSHNLRSVRT*RRPAPA
Trigger: CGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCT...AAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CAA 90 bp GACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGCGGTCAGGCTGGGTTaGACAAGATCAGAACCGAAA +
Preference number: 5 (lower is better)
Translates to: DYESGNTRRCIYYTLTFSAVRLG*TRSEPK
Trigger: TTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGC...GCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CAA 90 bp AAACACACAGCCATTGGAAGGACGATCTTGAGCAGGAAGGGTTTTTACTCGTTGTTTGGTCAGTCTCATTaGGCTTTTGCGTCCTGCGAT +
Preference number: 5 (lower is better)
Translates to: KHTAIGRTILSRKGFYSLFGQSH*AFASCD
Trigger: ATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAA...CAACGAGTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAATGGCTGTGTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CAA 90 bp TTCCTCAGCCACTGCAAATACAACATCGATGGAGTATGCGTACGTCTTCCAGTATTTGGTCAGTCTCATTaGGCTTTTGCGTCCTGCGAT +
Preference number: 5 (lower is better)
Translates to: FLSHCKYNIDGVCVRLPVFGQSH*AFASCD
Trigger: ATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAA...TACTGGAAGACGTACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CAA 90 bp AACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTAGGCCCTCGCTCTCCCTaGCCTTTTTGGTCAGTCTCA +
Preference number: 5 (lower is better)
Translates to: NRNDYESGNTRRCIYYTLGPRSP*PFWSVS
Trigger: TGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGCC...TAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CAA 90 bp AGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAATCCAGCGACTGCTCATaGGTGTCAAAACTCAGCCCT +
Preference number: 5 (lower is better)
Translates to: RRCIYYTLTFSEAPTIFKSSDCS*VSKLSP
Trigger: AGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGGA...TTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CAA 90 bp ATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACATCCAGCGACTGCTCATaGGTGTCAAAACTCAGCCCT +
Preference number: 5 (lower is better)
Translates to: IRTEMTTKVGIQGGAFTTSSDCS*VSKLSP
Trigger: AGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGGA...TGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CAA 90 bp AGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAAAGATCTGTCCGTACTTaGAGAAGACCTGCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: RRCIYYTLTFSEAPTIFKRSVRT*RRPAPA
Trigger: CGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCT...TTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CAA 90 bp AAAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAAGATCTGTCCGTACTTaGAGAAGACCTGCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: KENCVQEFLSHCKYNIDGRSVRT*RRPAPA
Trigger: CGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCT...TCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CAA 90 bp TGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACATTGGAAGGACGATCTaGAGCAGGAAGGGTTTTTAC +
Preference number: 5 (lower is better)
Translates to: WEYKEVHLLHINVQRSSHIGRTI*SRKGFY
Trigger: GTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAAT...GTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CAA 90 bp AGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAAGCGGTCAGGCTGGGTTaGACAAGATCAGAACCGAAA +
Preference number: 5 (lower is better)
Translates to: RRCIYYTLTFSEAPTIFKAVRLG*TRSEPK
Trigger: TTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGC...TTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CAA 90 bp AGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCAGTCTCATTTGGCTTTaGCGTCCTGCGATAGAAATG +
Preference number: 5 (lower is better)
Translates to: SGNTRRCIYYTLTFSEAPSLIWL*RPAIEM
Trigger: CATTTCTATCGCAGGACGCAAAAGCCAAATGAGACT...GGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CAA 90 bp AAAAAGGACAATATAAATAAACATCTTCAAGAACCTCTCAGGGACGTCTGCACGAGATCTGTCCGTACTTaGAGAAGACCTGCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: KKDNINKHLQEPLRDVCTRSVRT*RRPAPA
Trigger: CGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCT...CGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTATTTATATTGTCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000588344.2
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CAA 90 bp CGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCATTGGAAGGACGATCTaGAGCAGGAAGGGTTTTTAC +
Preference number: 5 (lower is better)
Translates to: RKWEYKEVHLLHINVQRSIGRTI*SRKGFY
Trigger: GTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAAT...GCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CAA 90 bp AACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTAGCGGTCAGGCTGGGTTaGACAAGATCAGAACCGAAA +
Preference number: 5 (lower is better)
Translates to: NRNDYESGNTRRCIYYTLAVRLG*TRSEPK
Trigger: TTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGC...TAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CAA 90 bp AAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGTTTGGTCAGTCTCATTaGGCTTTTGCGTCCTGCGAT +
Preference number: 5 (lower is better)
Translates to: KKTAYKNSSATANTTSMEFGQSH*AFASCD
Trigger: ATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAA...CTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CAA 90 bp GCTGGGTTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAAAGGGTTTTTACTCGTaGTGTGTAGCTGAGGACAAG +
Preference number: 5 (lower is better)
Translates to: AGFDKIRTEMTTKVGIQGKGFYS*CVAEDK
Trigger: CTTGTCCTCAGCTACACACAACGAGTAAAAACCCTT...TCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CAA 90 bp CGGTCTTTTAATCGGCTTCGTAAAGCCAAAGAAAACTGCGTACAAGAATTCCTCATTGGAAGGACGATCTaGAGCAGGAAGGGTTTTTAC +
Preference number: 5 (lower is better)
Translates to: RSFNRLRKAKENCVQEFLIGRTI*SRKGFY
Trigger: GTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAAT...GAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAGCCGATTAAAAGACCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CAA 90 bp GACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCATTGGAAGGACGATCTaGAGCAGGAAGGGTTTTTAC +
Preference number: 5 (lower is better)
Translates to: DYESGNTRRCIYYTLTFSIGRTI*SRKGFY
Trigger: GTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAAT...GCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CAA 90 bp GATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACATTGGAAGGACGATCTaGAGCAGGAAGGGTTTTTAC +
Preference number: 5 (lower is better)
Translates to: DQNRNDYESGNTRRCIYYIGRTI*SRKGFY
Trigger: GTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAAT...GTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CAA 90 bp CGTAAAGCCAAAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATTGGAAGGACGATCTaGAGCAGGAAGGGTTTTTAC +
Preference number: 5 (lower is better)
Translates to: RKAKENCVQEFLSHCKYNIGRTI*SRKGFY
Trigger: GTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAAT...GTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CAA 90 bp TTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCAATTGGAAGGACGATCTaGAGCAGGAAGGGTTTTTAC +
Preference number: 5 (lower is better)
Translates to: FDKIRTEMTTKVGIQGGAIGRTI*SRKGFY
Trigger: GTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAAT...TGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CAA 90 bp CGGTCTTTTAATCGGCTTCGTAAAGCCAAAGAAAACTGCGTACAAGAATTCCTCAGTCTCATTTGGCTTTaGCGTCCTGCGATAGAAATG +
Preference number: 5 (lower is better)
Translates to: RSFNRLRKAKENCVQEFLSLIWL*RPAIEM
Trigger: CATTTCTATCGCAGGACGCAAAAGCCAAATGAGACT...GAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAGCCGATTAAAAGACCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CAA 90 bp AGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACTTTGGTCAGTCTCATTaGGCTTTTGCGTCCTGCGAT +
Preference number: 5 (lower is better)
Translates to: RCIYYTLTFSEAPTIFKHFGQSH*AFASCD
Trigger: ATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAA...GTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CAA 90 bp TACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAGCCATTGGAAAGGGTTTTTACTCGTaGTGTGTAGCTGAGGACAAG +
Preference number: 5 (lower is better)
Translates to: YTLTFSEAPTIFKHTAIGKGFYS*CVAEDK
Trigger: CTTGTCCTCAGCTACACACAACGAGTAAAAACCCTT...TCCAATGGCTGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CAA 90 bp TACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTAAGGGTTTTTACTCGTaGTGTGTAGCTGAGGACAAG +
Preference number: 5 (lower is better)
Translates to: YKEVHLLHINVQRSSHNLKGFYS*CVAEDK
Trigger: CTTGTCCTCAGCTACACACAACGAGTAAAAACCCTT...AAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CAA 90 bp TGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTTAAACACACAATTGGAAGGACGATCTaGAGCAGGAAGGGTTTTTAC +
Preference number: 5 (lower is better)
Translates to: CIYYTLTFSEAPTIFKHTIGRTI*SRKGFY
Trigger: GTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAAT...TGTGTGTTTAAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
CDS-3UTR CAA 90 bp AAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGTATTGCAATGCAAGGGAATaGTCAGAGCAAGGTTCATTT +
Preference number: 5 (lower is better)
Translates to: KTAYKNSSATANTTSMEYCNARE*SEQGSF
Trigger: AAATGAACCTTGCTCTGACAATTCCCTTGCATTGCA...ATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS GCA 72 bp GTCCGCGGCGTTTGGCTCGAGCGGCCGGGCTCCCGGTaGCGCCGCTCCACGCAGACGCCTCGCGTGGGAGAG +
Preference number: 6 (lower is better)
Translates to: VRGVWLERPGSR*RRSTQTPRVGE
Trigger: CTCTCCCACGCGAGGCGTCTGCGTGGAGCGGCGGCACCGGGAGCCCGGCCGCTCGAGCCAAACGCCGCGGAC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589266.5
CDS TCA 72 bp CCAAGCAGCGGGCGGCCACGGGGGATTCCTGCCTCCTaGGTCCTCAACTCTCTTGGCCCGGAGCTCACACCG +
Preference number: 6 (lower is better)
Translates to: PSSGRPRGIPAS*VLNSLGPELTP
Trigger: CGGTGTGAGCTCCGGGCCAAGAGAGTTGAGGACTCAGGAGGCAGGAATCCCCCGTGGCCGCCCGCTGCTTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589161.1
CDS GCA 72 bp CCCACAGCCAAGCAGCGGGCGGCCACGGGGGATTCCTaGCTCCTGAGTCCTCAACTCTCTTGGCCCGGAGCT +
Preference number: 6 (lower is better)
Translates to: PTAKQRAATGDS*LLSPQLSWPGA
Trigger: AGCTCCGGGCCAAGAGAGTTGAGGACTCAGGAGGCAGGAATCCCCCGTGGCCGCCCGCTGCTTGGCTGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589161.1
CDS CCA 72 bp GGGTGTGGCAGAGTGGGAGTCCCCGACTCCTGTGGCTaGGGAGAGCTGGTGGTCGCGTCTCCCCCATACTGG +
Preference number: 6 (lower is better)
Translates to: GCGRVGVPDSCG*GELVVASPPYW
Trigger: CCAGTATGGGGGAGACGCGACCACCAGCTCTCCCCAGCCACAGGAGTCGGGGACTCCCACTCTGCCACACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588030.5
CDS TCA 72 bp CTGATGCCATGGCGGCCACTGAGTCGGGCAGGTCCCTaGCGCAAGCGGGAAGACAGCGCACCACAACGACCC +
Preference number: 6 (lower is better)
Translates to: LMPWRPLSRAGP*RKREDSAPQRP
Trigger: GGGTCGTTGTGGTGCGCTGTCTTCCCGCTTGCGTCAGGGACCTGCCCGACTCAGTGGCCGCCATGGCATCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000588230.5
ENST00000589235.5
ENST00000589686.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000591376.5
ENST00000591659.5
ENST00000593048.5
ENST00000593093.5
ENST00000593128.5
ENST00000593283.5
ENST00000628979.2
CDS TCA 72 bp CACCTCTCCCCGCTTCCACTGAGTCGGGCAGGTCCCTaGCGCAAGCGGGAAGACAGCGCACCACAACGACCC +
Preference number: 6 (lower is better)
Translates to: HLSPLPLSRAGP*RKREDSAPQRP
Trigger: GGGTCGTTGTGGTGCGCTGTCTTCCCGCTTGCGTCAGGGACCTGCCCGACTCAGTGGAAGCGGGGAGAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000585630.5
ENST00000586773.5
ENST00000589710.5
ENST00000590704.5
ENST00000592412.5
CDS TCA 72 bp TGCCATGGCGGCCACACACTGAGTCGGGCAGGTCCCTaGCGCAAGCGGGAAGACAGCGCACCACAACGACCC +
Preference number: 6 (lower is better)
Translates to: CHGGHTLSRAGP*RKREDSAPQRP
Trigger: GGGTCGTTGTGGTGCGCTGTCTTCCCGCTTGCGTCAGGGACCTGCCCGACTCAGTGTGTGGCCGCCATGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587323.5
CDS GCA 72 bp ACTGGAGACAGAGGGCGGGACGGGTTAGCAGGTGGGTaGCCCATCCTCGAGACGGGACTCCTGCTCAGCACC +
Preference number: 6 (lower is better)
Translates to: TGDRGRDGLAGG*PILETGLLLST
Trigger: GGTGCTGAGCAGGAGTCCCGTCTCGAGGATGGGGCACCCACCTGCTAACCCGTCCCGCCCTCTGTCTCCAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000590347.5
ENST00000590704.5
ENST00000591055.5
ENST00000593093.5
ENST00000593128.5
ENST00000593283.5
CDS GCA 72 bp ACTCGGTTTCACGTTTCCGGGCCTTGGCACACGCCGTaGCCCCTACCTGGCGCACCCTTCCCGCTTCCTACA +
Preference number: 6 (lower is better)
Translates to: TRFHVSGPWHTP*PLPGAPFPLPT
Trigger: TGTAGGAAGCGGGAAGGGTGCGCCAGGTAGGGGGCACGGCGTGTGCCAAGGCCCGGAAACGTGAAACCGAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000591622.1
ENST00000592051.1
ENST00000592467.1
CDS CCA 72 bp ACAGACTGGAGACAGAGGGCGGGACGGGTTAGCAGGTaGGTGCCCCATCCTCGAGACGGGACTCCTGCTCAG +
Preference number: 6 (lower is better)
Translates to: TDWRQRAGRVSR*VPHPRDGTPAQ
Trigger: CTGAGCAGGAGTCCCGTCTCGAGGATGGGGCACCCACCTGCTAACCCGTCCCGCCCTCTGTCTCCAGTCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000590347.5
ENST00000590704.5
ENST00000591055.5
ENST00000593093.5
ENST00000593128.5
ENST00000593283.5
CDS CCA 72 bp TCATCGCTGCTCTCAGGGACGTCTGCACGTCTACTGTaGGGCGCACAGCACAGATGGACGCAGGGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: SSLLSGTSARLL*GAQHRWTQGLG
Trigger: CCCCAGCCCCTGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGCAGCGATGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590188.5
CDS CCA 72 bp CCAGGCCGCTCCAGAGGCCAGGCTGCACAAACACCTTaGCTAGTCTCCCCACCTGGCACAGGCCCTGTTCAC +
Preference number: 6 (lower is better)
Translates to: PGRSRGQAAQTP*LVSPPGTGPVH
Trigger: GTGAACAGGGCCTGTGCCAGGTGGGGAGACTAGCCAAGGTGTTTGTGCAGCCTGGCCTCTGGAGCGGCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589161.1
CDS CCA 72 bp CCCAGCTGTGAGGCAGGCGGTGCCCAAGACGCTCTCTaGACCGCACTGCTTCATCTGAGAGGTGGGCATGCC +
Preference number: 6 (lower is better)
Translates to: PSCEAGGAQDAL*TALLHLRGGHA
Trigger: GGCATGCCCACCTCTCAGATGAAGCAGTGCGGTCCAGAGAGCGTCTTGGGCACCGCCTGCCTCACAGCTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589161.1
CDS CCA 72 bp CGTTTCCGGGCCTTGGCACACGCCGTGCCCCCTACCTaGCGCACCCTTCCCGCTTCCTACAACACTTGGCAA +
Preference number: 6 (lower is better)
Translates to: RFRALAHAVPPT*RTLPASYNTWQ
Trigger: TTGCCAAGTGTTGTAGGAAGCGGGAAGGGTGCGCCAGGTAGGGGGCACGGCGTGTGCCAAGGCCCGGAAACG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000591622.1
ENST00000592051.1
ENST00000592467.1
CDS CCA 72 bp CTTCCAGGTGTGGACCTGTGTCGGTACCTGTGCCTCTaGGGTCAGCTGCGTCTGCGAGCACCCGTGACTCCC +
Preference number: 6 (lower is better)
Translates to: LPGVDLCRYLCL*GQLRLRAPVTP
Trigger: GGGAGTCACGGGTGCTCGCAGACGCAGCTGACCCCAGAGGCACAGGTACCGACACAGGTCCACACCTGGAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592815.5
CDS GCA 72 bp CCGGCTGGCCGTCTGAGGTCGCCCTGGGATGCCACGTaGCTCTGCTCTCTGGCCTGCTTCGTAACTGTCATA +
Preference number: 6 (lower is better)
Translates to: PAGRLRSPWDAT*LCSLACFVTVI
Trigger: TATGACAGTTACGAAGCAGGCCAGAGAGCAGAGGCACGTGGCATCCCAGGGCGACCTCAGACGGCCAGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444172.6
ENST00000585914.5
CDS GCA 72 bp CCTCGGTCCCCTCCTCCTGCCTGGTCTACTCGGATCTaGCGTCCATCTACAGACTGGAGACAGAGGGCGGGA +
Preference number: 6 (lower is better)
Translates to: PRSPPPAWSTRI*RPSTDWRQRAG
Trigger: TCCCGCCCTCTGTCTCCAGTCTGTAGATGGACGGCAGATCCGAGTAGACCAGGCAGGAGGAGGGGACCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590347.5
ENST00000591055.5
CDS CCA 72 bp AACATAGCTAGACCCTGTCTCTGTGAGATCACCGCCTaGCAGGGACGCCAGCACGGGCTCCCAGCCACAGGG +
Preference number: 6 (lower is better)
Translates to: NIARPCLCEITA*QGRQHGLPATG
Trigger: CCCTGTGGCTGGGAGCCCGTGCTGGCGTCCCTGCCAGGCGGTGATCTCACAGAGACAGGGTCTAGCTATGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589161.1
CDS CCA 72 bp ACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATaGACGCAGGGGCTGGTCTACTCGGATCTGCCGTCC +
Preference number: 6 (lower is better)
Translates to: TSARLLWGAQHR*TQGLVYSDLPS
Trigger: GGACGGCAGATCCGAGTAGACCAGCCCCTGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588344.2
CDS CAA 90 bp GCGGGCGGCCACGGGGGATTCCTGCCTCCTGAGTCCTCAACTCTCTaGGCCCGGAGCTCACACCGGCATTTCAGATTTTCTCCTTCCCCC +
Preference number: 6 (lower is better)
Translates to: AGGHGGFLPPESSTL*ARSSHRHFRFSPSP
Trigger: GGGGGAAGGAGAAAATCTGAAATGCCGGTGTGAGCTCCGGGCCAAGAGAGTTGAGGACTCAGGAGGCAGGAATCCCCCGTGGCCGCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589161.1
CDS CAA 90 bp CCGGCAGAGCCACCACGGTACCCACGGGATCGGTTGTCTGACGACTaGCCTGCCTGGTCTACTCGGATCTGCCGTCCATCTACAGACTGG +
Preference number: 6 (lower is better)
Translates to: PAEPPRYPRDRLSDD*PAWSTRICRPSTDW
Trigger: CCAGTCTGTAGATGGACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTACCGTGGTGGCTCTGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000590704.5
ENST00000593093.5
ENST00000593128.5
ENST00000593283.5
CDS GCA 72 bp TCTCTGGACCGCACTGCTTCATCTGAGAGGTGGGCATaGCAGCAGCACCTCCTGGGGTTAGAGGCGCACAGG +
Preference number: 6 (lower is better)
Translates to: SLDRTASSERWA*QQHLLGLEAHR
Trigger: CCTGTGCGCCTCTAACCCCAGGAGGTGCTGCTGGCATGCCCACCTCTCAGATGAAGCAGTGCGGTCCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000589161.1
ENST00000591622.1
ENST00000592467.1
CDS GCA 72 bp GAATCATCCCGTATGCAGGCCGGGAGCGCTGGCTCATaGCTGCTCTTCCTCTCTGGTCCCCCAAGTCATCCC +
Preference number: 6 (lower is better)
Translates to: ESSRMQAGSAGS*LLFLSGPPSHP
Trigger: GGGATGACTTGGGGGACCAGAGAGGAAGAGCAGGCATGAGCCAGCGCTCCCGGCCTGCATACGGGATGATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591622.1
CDS CCA 72 bp GCCTGGTCTACTCGGATCTGCCGTCCATCTACAGACTaGAGACAGAGGGCGGGACGGGTTAGCAGGTGGGTG +
Preference number: 6 (lower is better)
Translates to: AWSTRICRPSTD*RQRAGRVSRWV
Trigger: CACCCACCTGCTAACCCGTCCCGCCCTCTGTCTCCAGTCTGTAGATGGACGGCAGATCCGAGTAGACCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000590347.5
ENST00000590704.5
ENST00000591055.5
ENST00000593093.5
ENST00000593128.5
ENST00000593283.5
CDS CCA 72 bp AGACGCTCTCTGGACCGCACTGCTTCATCTGAGAGGTaGGCATGCCAGCAGCACCTCCTGGGGTTAGAGGCG +
Preference number: 6 (lower is better)
Translates to: RRSLDRTASSER*ACQQHLLGLEA
Trigger: CGCCTCTAACCCCAGGAGGTGCTGCTGGCATGCCCACCTCTCAGATGAAGCAGTGCGGTCCAGAGAGCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000589161.1
ENST00000591622.1
ENST00000592467.1
CDS CCA 72 bp GCGGCCTGGCGCACCCTTCCCGCTTCCTACAACACTTaGCAAACTCCTGCTCCTTTGGCAAAGCCTCAGCCC +
Preference number: 6 (lower is better)
Translates to: AAWRTLPASYNT*QTPAPLAKPQP
Trigger: GGGCTGAGGCTTTGCCAAAGGAGCAGGAGTTTGCCAAGTGTTGTAGGAAGCGGGAAGGGTGCGCCAGGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588411.5
CDS CCA 72 bp AGCAGTACCTCACAGCATCCCCAAGGGACCCACTCATaGCACTCACCTCTAGAGAACCCACGGCCCCGTCCT +
Preference number: 6 (lower is better)
Translates to: SSTSQHPQGTHS*HSPLENPRPRP
Trigger: AGGACGGGGCCGTGGGTTCTCTAGAGGTGAGTGCCATGAGTGGGTCCCTTGGGGATGCTGTGAGGTACTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591659.5
ENST00000593283.5
CDS CCA 72 bp TTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTaGGGCGCACAGCACAGATGGACGCAGGGGCTGGTC +
Preference number: 6 (lower is better)
Translates to: FKNLSGTSARLL*GAQHRWTQGLV
Trigger: GACCAGCCCCTGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588344.2
CDS CAA 90 bp CGCACCCTTCCCGCTTCCTACAACACTTGGCAAACTCCTGCTCCTTaGGCAAAGCCTCAGCCCCAAAGTCCCCCTCCTCCTAGCCTCCTG +
Preference number: 6 (lower is better)
Translates to: RTLPASYNTWQTPAP*AKPQPQSPPPPSLL
Trigger: CAGGAGGCTAGGAGGAGGGGGACTTTGGGGCTGAGGCTTTGCCAAAGGAGCAGGAGTTTGCCAAGTGTTGTAGGAAGCGGGAAGGGTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000588411.5
ENST00000591622.1
ENST00000592467.1
CDS TCA 72 bp GCCCCATCCTCGAGACGGGACTCCTGCTCAGCACCCTaGTCCTCACCTTCCCATTCATGGCCATCATGGCAT +
Preference number: 6 (lower is better)
Translates to: APSSRRDSCSAP*SSPSHSWPSWH
Trigger: ATGCCATGATGGCCATGAATGGGAAGGTGAGGATCAGGGTGCTGAGCAGGAGTCCCGTCTCGAGGATGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000590347.5
ENST00000590704.5
ENST00000591055.5
ENST00000593093.5
ENST00000593128.5
ENST00000593283.5
CDS GCA 72 bp CCTCGGTCCCCTCCTCCTGCCTGGTCTACTCGGATCTaGCGTCCATCTACAGACTTCCCATTCATGGCCATC +
Preference number: 6 (lower is better)
Translates to: PRSPPPAWSTRI*RPSTDFPFMAI
Trigger: GATGGCCATGAATGGGAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCAGGCAGGAGGAGGGGACCGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413636.6
CDS CCA 72 bp CCAGGCTGCACAAACACCTTGGCTAGTCTCCCCACCTaGCACAGGCCCTGTTCACTCCAACCACTGCCTTCT +
Preference number: 6 (lower is better)
Translates to: PGCTNTLASLPT*HRPCSLQPLPS
Trigger: AGAAGGCAGTGGTTGGAGTGAACAGGGCCTGTGCCAGGTGGGGAGACTAGCCAAGGTGTTTGTGCAGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589161.1
CDS CCA 72 bp CCTACCTGGCGCACCCTTCCCGCTTCCTACAACACTTaGCAAACTCCTGCTCCTTTGGCAAAGCCTCAGCCC +
Preference number: 6 (lower is better)
Translates to: PTWRTLPASYNT*QTPAPLAKPQP
Trigger: GGGCTGAGGCTTTGCCAAAGGAGCAGGAGTTTGCCAAGTGTTGTAGGAAGCGGGAAGGGTGCGCCAGGTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000591622.1
ENST00000592051.1
ENST00000592467.1
CDS CAA 72 bp TCTCTGGTCCCCCAAGTCATCCCTCCAGTGGCCGACTaGGGGAATCACCGTTTAGGGTCCTTGTCAGCCTCG +
Preference number: 6 (lower is better)
Translates to: SLVPQVIPPVAD*GNHRLGSLSAS
Trigger: CGAGGCTGACAAGGACCCTAAACGGTGATTCCCCAAGTCGGCCACTGGAGGGATGACTTGGGGGACCAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000591622.1
ENST00000592051.1
ENST00000592467.1
CDS CAA 90 bp TGCTCTTCCTCTCTGGTCCCCCAAGTCATCCCTCCAGTGGCCGACTaGGGGAATCACCGTTTAGGGTCCTTGTCAGCCTCGCCTTTCCTC +
Preference number: 6 (lower is better)
Translates to: CSSSLVPQVIPPVAD*GNHRLGSLSASPFL
Trigger: GAGGAAAGGCGAGGCTGACAAGGACCCTAAACGGTGATTCCCCAAGTCGGCCACTGGAGGGATGACTTGGGGGACCAGAGAGGAAGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000591622.1
ENST00000592051.1
ENST00000592467.1
CDS CAA 72 bp CCCGCTTCCTACAACACTTGGCAAACTCCTGCTCCTTaGGCAAAGCCTCAGCCCCAAAGTCCCCCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: PASYNTWQTPAP*AKPQPQSPPPP
Trigger: AGGAGGAGGGGGACTTTGGGGCTGAGGCTTTGCCAAAGGAGCAGGAGTTTGCCAAGTGTTGTAGGAAGCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000588411.5
ENST00000591622.1
ENST00000592467.1
CDS CAA 90 bp CCGCGGGCCCAGCAGCAGCCTCACCTTCAGAGATCTGTCCGTACTTaGAGAAGACCTGCTCCAGCGACTGCTCATTGGTGTCAAAACTCA +
Preference number: 6 (lower is better)
Translates to: PRAQQQPHLQRSVRT*RRPAPATAHWCQNS
Trigger: TGAGTTTTGACACCAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCTCTGAAGGTGAGGCTGCTGCTGGGCCCGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593093.5
CDS TCA 72 bp AAAACTCAGCCCTCCAACAAAAAGTTTGCCTTCATCTaGTGCCATGGCGGCCATGCGGGACCCGACCGGGAC +
Preference number: 6 (lower is better)
Translates to: KTQPSNKKFAFI*CHGGHAGPDRD
Trigger: GTCCCGGTCGGGTCCCGCATGGCCGCCATGGCATCAGATGAAGGCAAACTTTTTGTTGGAGGGCTGAGTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589266.5
CDS GCA 72 bp AGCACAGATGGACGCAGGGGCTGGTCTACTCGGATCTaGCGTCCATCTACAGACTTCCCATTCATGGCCATC +
Preference number: 6 (lower is better)
Translates to: STDGRRGWSTRI*RPSTDFPFMAI
Trigger: GATGGCCATGAATGGGAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCAGCCCCTGCGTCCATCTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588344.2
CDS CCA 72 bp CCGCTTCCTACAACACTTGGCAAACTCCTGCTCCTTTaGCAAAGCCTCAGCCCCAAAGTCCCCCTCCTCCTA +
Preference number: 6 (lower is better)
Translates to: PLPTTLGKLLLL*QSLSPKVPLLL
Trigger: TAGGAGGAGGGGGACTTTGGGGCTGAGGCTTTGCCAAAGGAGCAGGAGTTTGCCAAGTGTTGTAGGAAGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000588411.5
ENST00000591622.1
ENST00000592467.1
CDS CAA 90 bp AAGACAGCTCCACGCAGCGCCAGGCTTTCCTTGTTGTTTGCTTCCTaGATGTGGCAGTCCACATGGAATCATCCCGTATGCAGGCCGGGA +
Preference number: 6 (lower is better)
Translates to: KTAPRSARLSLLFAS*MWQSTWNHPVCRPG
Trigger: TCCCGGCCTGCATACGGGATGATTCCATGTGGACTGCCACATCAAGGAAGCAAACAACAAGGAAAGCCTGGCGCTGCGTGGAGCTGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000589161.1
ENST00000591622.1
ENST00000592051.1
ENST00000592467.1
CDS TCA 72 bp AAAACTCAGCCCTCCAACAAAAAGTTTGCCTTCATCTaGTGCCATGGCGGCCTGGCGCACCCTTCCCGCTTC +
Preference number: 6 (lower is better)
Translates to: KTQPSNKKFAFI*CHGGLAHPSRF
Trigger: GAAGCGGGAAGGGTGCGCCAGGCCGCCATGGCATCAGATGAAGGCAAACTTTTTGTTGGAGGGCTGAGTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588411.5
CDS CCA 72 bp TCCTTGTTGTTTGCTTCCTTGATGTGGCAGTCCACATaGAATCATCCCGTATGCAGGCCGGGAGCGCTGGCT +
Preference number: 6 (lower is better)
Translates to: SLLFASLMWQST*NHPVCRPGALA
Trigger: AGCCAGCGCTCCCGGCCTGCATACGGGATGATTCCATGTGGACTGCCACATCAAGGAAGCAAACAACAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000589161.1
ENST00000591622.1
ENST00000592051.1
ENST00000592467.1
CDS TCA 72 bp TCATCTGATGCCATGGCGGCCTGTGGCAGACACCAATaGAATCCTCAACAGGGGTCATCTCTCACCACCTCT +
Preference number: 6 (lower is better)
Translates to: SSDAMAACGRHQ*NPQQGSSLTTS
Trigger: AGAGGTGGTGAGAGATGACCCCTGTTGAGGATTTCATTGGTGTCTGCCACAGGCCGCCATGGCATCAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000585630.5
ENST00000586773.5
ENST00000589710.5
ENST00000590704.5
ENST00000592412.5
CDS TCA 72 bp AAAACTCAGCCCTCCAACAAAAAGTTTGCCTTCATCTaGTGCCATGGCGGCCTGCCAGCCCAAGGTACCCTG +
Preference number: 6 (lower is better)
Translates to: KTQPSNKKFAFI*CHGGLPAQGTL
Trigger: CAGGGTACCTTGGGCTGGCAGGCCGCCATGGCATCAGATGAAGGCAAACTTTTTGTTGGAGGGCTGAGTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588030.5
CDS TCA 72 bp AAAACTCAGCCCTCCAACAAAAAGTTTGCCTTCATCTaGTGCCATGGCGGCTACGAGCGGGTTCCTGGGTGC +
Preference number: 6 (lower is better)
Translates to: KTQPSNKKFAFI*CHGGYERVPGC
Trigger: GCACCCAGGAACCCGCTCGTAGCCGCCATGGCATCAGATGAAGGCAAACTTTTTGTTGGAGGGCTGAGTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585913.5
ENST00000586548.5
CDS TCA 72 bp AAAACTCAGCCCTCCAACAAAAAGTTTGCCTTCATCTaGTGCCATGGCGGCCTGCGCACACCTGCCGCTTTG +
Preference number: 6 (lower is better)
Translates to: KTQPSNKKFAFI*CHGGLRTPAAL
Trigger: CAAAGCGGCAGGTGTGCGCAGGCCGCCATGGCATCAGATGAAGGCAAACTTTTTGTTGGAGGGCTGAGTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592815.5
CDS GCA 72 bp TCTGTTGGGCGCACAACACTTCTGTCCTCCGAGGGCTaGAGCTTCCATAGGCGTAACTGTCATAACTGTCTC +
Preference number: 6 (lower is better)
Translates to: SVGRTTLLSSEG*SFHRRNCHNCL
Trigger: GAGACAGTTATGACAGTTACGCCTATGGAAGCTGCAGCCCTCGGAGGACAGAAGTGTTGTGCGCCCAACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592234.5
CDS CAA 72 bp CAGCAGCAGCCTCACCTTCAGAGATCTGTCCGTACTTaGAGAAGACCTGCTCCAGCGACTGCTCATTGGTGT +
Preference number: 6 (lower is better)
Translates to: QQQPHLQRSVRT*RRPAPATAHWC
Trigger: ACACCAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCTCTGAAGGTGAGGCTGCTGCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593093.5
CDS CAA 72 bp GCAGGGGAGAGAGGTCTTCAGAGATCTGTCCGTACTTaGAGAAGACCTGCTCCAGCGACTGCTCATTGGTGT +
Preference number: 6 (lower is better)
Translates to: AGERGLQRSVRT*RRPAPATAHWC
Trigger: ACACCAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCTCTGAAGACCTCTCTCCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
CDS CAA 72 bp CCACGCAGCGCCAGGCTTTCCTTGTTGTTTGCTTCCTaGATGTGGCAGTCCACATGGAATCATCCCGTATGC +
Preference number: 6 (lower is better)
Translates to: PRSARLSLLFAS*MWQSTWNHPVC
Trigger: GCATACGGGATGATTCCATGTGGACTGCCACATCAAGGAAGCAAACAACAAGGAAAGCCTGGCGCTGCGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000589161.1
ENST00000591622.1
ENST00000592051.1
ENST00000592467.1
CDS CAA 72 bp CAGCAAAAGACAGCTCCACGCAGCGCCAGGCTTTCCTaGTTGTTTGCTTCCTTGATGTGGCAGTCCACATGG +
Preference number: 6 (lower is better)
Translates to: QQKTAPRSARLS*LFASLMWQSTW
Trigger: CCATGTGGACTGCCACATCAAGGAAGCAAACAACAAGGAAAGCCTGGCGCTGCGTGGAGCTGTCTTTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000589161.1
ENST00000591622.1
ENST00000592051.1
ENST00000592467.1
CDS CAA 90 bp GTCATCCCTCCAGTGGCCGACTTGGGGAATCACCGTTTAGGGTCCTaGTCAGCCTCGCCTTTCCTCCCATCTTTGATTTTTCTCCACCAA +
Preference number: 6 (lower is better)
Translates to: VIPPVADLGNHRLGS*SASPFLPSLIFLHQ
Trigger: TTGGTGGAGAAAAATCAAAGATGGGAGGAAAGGCGAGGCTGACAAGGACCCTAAACGGTGATTCCCCAAGTCGGCCACTGGAGGGATGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000591622.1
ENST00000592051.1
ENST00000592467.1
CDS TCA 72 bp CACGCAGCGCCAGGCTTTCCTTGTTGTTTGCTTCCTTaGTGTGGCAGTCCACATGGAATCATCCCGTATGCA +
Preference number: 6 (lower is better)
Translates to: HAAPGFPCCLLP*CGSPHGIIPYA
Trigger: TGCATACGGGATGATTCCATGTGGACTGCCACATCAAGGAAGCAAACAACAAGGAAAGCCTGGCGCTGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000589161.1
ENST00000591622.1
ENST00000592051.1
ENST00000592467.1
CDS TCA 72 bp AAAACTCAGCCCTCCAACAAAAAGTTTGCCTTCATCTaGTGCCATGGCGGCCACACACTGAGTCGGGCAGGT +
Preference number: 6 (lower is better)
Translates to: KTQPSNKKFAFI*CHGGHTLSRAG
Trigger: ACCTGCCCGACTCAGTGTGTGGCCGCCATGGCATCAGATGAAGGCAAACTTTTTGTTGGAGGGCTGAGTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587323.5
CDS CAA 72 bp TTAGGGTCCTTGTCAGCCTCGCCTTTCCTCCCATCTTaGATTTTTCTCCACCAACTGACTTCCCGGTTGCCC +
Preference number: 6 (lower is better)
Translates to: LGSLSASPFLPS*IFLHQLTSRLP
Trigger: GGGCAACCGGGAAGTCAGTTGGTGGAGAAAAATCAAAGATGGGAGGAAAGGCGAGGCTGACAAGGACCCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000591622.1
ENST00000592051.1
ENST00000592467.1
CDS CAA 72 bp CCAGTGGCCGACTTGGGGAATCACCGTTTAGGGTCCTaGTCAGCCTCGCCTTTCCTCCCATCTTTGATTTTT +
Preference number: 6 (lower is better)
Translates to: PVADLGNHRLGS*SASPFLPSLIF
Trigger: AAAAATCAAAGATGGGAGGAAAGGCGAGGCTGACAAGGACCCTAAACGGTGATTCCCCAAGTCGGCCACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000591622.1
ENST00000592051.1
ENST00000592467.1
CDS TCA 72 bp AAAACTCAGCCCTCCAACAAAAAGTTTGCCTTCATCTaGTGCCATGGCGGCCTCCTGCACCCTGATACTCCT +
Preference number: 6 (lower is better)
Translates to: KTQPSNKKFAFI*CHGGLLHPDTP
Trigger: AGGAGTATCAGGGTGCAGGAGGCCGCCATGGCATCAGATGAAGGCAAACTTTTTGTTGGAGGGCTGAGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586472.5
CDS TCA 72 bp AAAACTCAGCCCTCCAACAAAAAGTTTGCCTTCATCTaGTGCCATGGCGGCCTGGTAGGAAGTCGGTCAAGG +
Preference number: 6 (lower is better)
Translates to: KTQPSNKKFAFI*CHGGLVGSRSR
Trigger: CCTTGACCGACTTCCTACCAGGCCGCCATGGCATCAGATGAAGGCAAACTTTTTGTTGGAGGGCTGAGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592051.1
CDS CAA 72 bp CCGTCCATCTACAGACTTCAGAGATCTGTCCGTACTTaGAGAAGACCTGCTCCAGCGACTGCTCATTGGTGT +
Preference number: 6 (lower is better)
Translates to: PSIYRLQRSVRT*RRPAPATAHWC
Trigger: ACACCAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCTCTGAAGTCTGTAGATGGACGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587169.5
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS CAA 72 bp CAAAAGACAGCTCCACGCAGCGCCAGGCTTTCCTTGTaGTTTGCTTCCTTGATGTGGCAGTCCACATGGAAT +
Preference number: 6 (lower is better)
Translates to: QKTAPRSARLSL*FASLMWQSTWN
Trigger: ATTCCATGTGGACTGCCACATCAAGGAAGCAAACAACAAGGAAAGCCTGGCGCTGCGTGGAGCTGTCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000589161.1
ENST00000591622.1
ENST00000592051.1
ENST00000592467.1
CDS GCA 72 bp ACCACTTCAGAGATCTGTCCGTACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTGGTGTCAAAACTCAGC +
Preference number: 6 (lower is better)
Translates to: TTSEICPYFEKT*SSDCSLVSKLS
Trigger: GCTGAGTTTTGACACCAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCTCTGAAGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 29 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000585913.5
ENST00000585914.5
ENST00000586472.5
ENST00000586548.5
ENST00000586636.5
ENST00000586773.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000588230.5
ENST00000588344.2
ENST00000588411.5
ENST00000589235.5
ENST00000589266.5
ENST00000589686.5
ENST00000589710.5
ENST00000590347.5
ENST00000590704.5
ENST00000591055.5
ENST00000591659.5
ENST00000591935.5
ENST00000592815.5
ENST00000593128.5
ENST00000593283.5
ENST00000628979.2
CDS GCA 72 bp TCACCTTCAGAGATCTGTCCGTACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTGGTGTCAAAACTCAGC +
Preference number: 6 (lower is better)
Translates to: SPSEICPYFEKT*SSDCSLVSKLS
Trigger: GCTGAGTTTTGACACCAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCTCTGAAGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593093.5
CDS GCA 72 bp AGGTCTTCAGAGATCTGTCCGTACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTGGTGTCAAAACTCAGC +
Preference number: 6 (lower is better)
Translates to: RSSEICPYFEKT*SSDCSLVSKLS
Trigger: GCTGAGTTTTGACACCAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCTCTGAAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
CDS GCA 72 bp CAGACTTCAGAGATCTGTCCGTACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTGGTGTCAAAACTCAGC +
Preference number: 6 (lower is better)
Translates to: QTSEICPYFEKT*SSDCSLVSKLS
Trigger: GCTGAGTTTTGACACCAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCTCTGAAGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587169.5
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS CAA 72 bp CTTTCACAACCACCACTTCAGAGATCTGTCCGTACTTaGAGAAGACCTGCTCCAGCGACTGCTCATTGGTGT +
Preference number: 6 (lower is better)
Translates to: LSQPPLQRSVRT*RRPAPATAHWC
Trigger: ACACCAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCTCTGAAGTGGTGGTTGTGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 28 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000585913.5
ENST00000585914.5
ENST00000586472.5
ENST00000586548.5
ENST00000586636.5
ENST00000586773.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000588230.5
ENST00000588344.2
ENST00000588411.5
ENST00000589235.5
ENST00000589266.5
ENST00000589686.5
ENST00000589710.5
ENST00000590347.5
ENST00000590704.5
ENST00000591055.5
ENST00000591659.5
ENST00000591935.5
ENST00000593128.5
ENST00000593283.5
ENST00000628979.2
CDS TCA 72 bp AAAACTCAGCCCTCCAACAAAAAGTTTGCCTTCATCTaGTGCCATGGCGGCCTGTGGCAGACACCAATGAAA +
Preference number: 6 (lower is better)
Translates to: KTQPSNKKFAFI*CHGGLWQTPMK
Trigger: TTTCATTGGTGTCTGCCACAGGCCGCCATGGCATCAGATGAAGGCAAACTTTTTGTTGGAGGGCTGAGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000585630.5
ENST00000586773.5
ENST00000589710.5
ENST00000590704.5
ENST00000592412.5
CDS CCA 72 bp CGTACTTTGAGAAGACCTGCTCCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTCCAACAAAAAGTTTGC +
Preference number: 6 (lower is better)
Translates to: RTLRRPAPATAH*CQNSALQQKVC
Trigger: GCAAACTTTTTGTTGGAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 37 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000585913.5
ENST00000585914.5
ENST00000586472.5
ENST00000586548.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000588230.5
ENST00000588344.2
ENST00000588411.5
ENST00000589235.5
ENST00000589266.5
ENST00000589686.5
ENST00000589710.5
ENST00000590171.1
ENST00000590347.5
ENST00000590704.5
ENST00000591055.5
ENST00000591097.5
ENST00000591376.5
ENST00000591659.5
ENST00000591935.5
ENST00000592051.1
ENST00000592412.5
ENST00000592815.5
ENST00000593048.5
ENST00000593093.5
ENST00000593128.5
ENST00000593283.5
ENST00000628979.2
CDS CAA 72 bp CCGTACTTTGAGAAGACCTGCTCCAGCGACTGCTCATaGGTGTCAAAACTCAGCCCTCCAACAAAAAGTTTG +
Preference number: 6 (lower is better)
Translates to: PYFEKTCSSDCS*VSKLSPPTKSL
Trigger: CAAACTTTTTGTTGGAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTACGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 37 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000585913.5
ENST00000585914.5
ENST00000586472.5
ENST00000586548.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000588230.5
ENST00000588344.2
ENST00000588411.5
ENST00000589235.5
ENST00000589266.5
ENST00000589686.5
ENST00000589710.5
ENST00000590171.1
ENST00000590347.5
ENST00000590704.5
ENST00000591055.5
ENST00000591097.5
ENST00000591376.5
ENST00000591659.5
ENST00000591935.5
ENST00000592051.1
ENST00000592412.5
ENST00000592815.5
ENST00000593048.5
ENST00000593093.5
ENST00000593128.5
ENST00000593283.5
ENST00000628979.2
CDS CAA 90 bp GAGATCTGTCCGTACTTTGAGAAGACCTGCTCCAGCGACTGCTCATaGGTGTCAAAACTCAGCCCTCCAACAAAAAGTTTGCCTTCATCT +
Preference number: 6 (lower is better)
Translates to: EICPYFEKTCSSDCS*VSKLSPPTKSLPSS
Trigger: AGATGAAGGCAAACTTTTTGTTGGAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 35 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000585913.5
ENST00000585914.5
ENST00000586472.5
ENST00000586548.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587323.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000588230.5
ENST00000588411.5
ENST00000589235.5
ENST00000589266.5
ENST00000589686.5
ENST00000589710.5
ENST00000590171.1
ENST00000590347.5
ENST00000590704.5
ENST00000591055.5
ENST00000591097.5
ENST00000591376.5
ENST00000591659.5
ENST00000591935.5
ENST00000592412.5
ENST00000592815.5
ENST00000593048.5
ENST00000593093.5
ENST00000593128.5
ENST00000593283.5
ENST00000628979.2