RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CIRBP (Homo sapiens)

Ensembl gene IDs: ENSG00000099622

Ensembl transcript IDs: ENST00000320936.9, ENST00000413636.6, ENST00000444172.6, ENST00000585630.5, ENST00000585913.5, ENST00000585914.5, ENST00000586472.5, ENST00000586548.5, ENST00000586636.5, ENST00000586773.5, ENST00000587169.5, ENST00000587323.5, ENST00000587896.6, ENST00000588030.5, ENST00000588090.5, ENST00000588230.5, ENST00000588344.2, ENST00000588411.5, ENST00000589161.1, ENST00000589235.5, ENST00000589266.5, ENST00000589686.5, ENST00000589710.5, ENST00000590171.1, ENST00000590188.5, ENST00000590347.5, ENST00000590704.5, ENST00000591055.5, ENST00000591097.5, ENST00000591376.5, ENST00000591622.1, ENST00000591659.5, ENST00000591935.5, ENST00000592051.1, ENST00000592234.5, ENST00000592412.5, ENST00000592467.1, ENST00000592815.5, ENST00000593048.5, ENST00000593093.5, ENST00000593128.5, ENST00000593283.5, ENST00000628979.2

Found 1478 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGCGCGGGCTCCAGGCGGGGGACCCGGCGCTCCCGGGAGGCGCTaGCCTGCACCCAACACACACCGAAAGGCGCCCGCCATGGGGCCA +
Preference number: 1 (lower is better)
Translates to: QARAPGGGPGAPGRR*PAPNTHRKAPAMGP
Trigger: TGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGCGCCGGGTCCCCCGCCTGGAGCCCGCGCCTG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
3UTR GCA 90 bp GCGGGCTCCAGGCGGGGGACCCGGCGCTCCCGGGAGGCGCTGCCCTaGACCCAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGT +
Preference number: 1 (lower is better)
Translates to: AGSRRGTRRSREALP*TQHTPKGARHGAIG
Trigger: ACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGCGCCGGGTCCCCCGCCTGGAGCCCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
3UTR TCA 90 bp CTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTCC +
Preference number: 1 (lower is better)
Translates to: LPAHRSPCSRRDSRP*ARTSLAKRLRGQAS
Trigger: GGAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR TCA 90 bp CTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCGAAGCGCAGGGGACAAGCCTCCTGG +
Preference number: 1 (lower is better)
Translates to: LPAHRSPCSRRDSRP*ARTSLAKRRGQASW
Trigger: CCAGGAGGCTTGTCCCCTGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585913.5
3UTR TCA 90 bp CTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCGAAGCGCCTCCTGGAAGGAGGAGGA +
Preference number: 1 (lower is better)
Translates to: LPAHRSPCSRRDSRP*ARTSLAKRLLEGGG
Trigger: TCCTCCTCCTTCCAGGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
3UTR TCA 90 bp CTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCGAAGCGCCTCTTACAGGGGACAAGC +
Preference number: 1 (lower is better)
Translates to: LPAHRSPCSRRDSRP*ARTSLAKRLLQGTS
Trigger: GCTTGTCCCCTGTAAGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585914.5
3UTR GCA 90 bp CAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTaGCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCT +
Preference number: 1 (lower is better)
Translates to: QGSTSLWARTGRPVS*RRTAARAPGETRGP
Trigger: AGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR GCA 90 bp CTGCACCCAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTaGGGGAGAGCAGGACTCACTGAAACGCCCAGGTGCCGCCCGGGA +
Preference number: 1 (lower is better)
Translates to: LHPTHTERRPPWGHR*GRAGLTETPRCRPG
Trigger: TCCCGGGCGGCACCTGGGCGTTTCAGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
3UTR CCA 90 bp TCTGCTCCTTGCCCAGCCAGTCTCATCTCAGCTCCCCCAGGGACCTaGGACCCGGGACGGAAGCTGGCCATCCCGCAACCACCCCTGTGC +
Preference number: 1 (lower is better)
Translates to: SAPCPASLISAPPGT*DPGRKLAIPQPPLC
Trigger: GCACAGGGGTGGTTGCGGGATGGCCAGCTTCCGTCCCGGGTCCCAGGTCCCTGGGGGAGCTGAGATGAGACTGGCTGGGCAAGGAGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR CCA 90 bp GGAGGCGCTGCCCTGCACCCAACACACACCGAAAGGCGCCCGCCATaGGGCCATAGGTGCGGGAGAGCAGGACTCACTGAAACGCCCAGG +
Preference number: 1 (lower is better)
Translates to: GGAALHPTHTERRPP*GHRCGRAGLTETPR
Trigger: CCTGGGCGTTTCAGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
3UTR TCA 90 bp CCCACAGCCGAGGGAGGCTGGCCTGCGGCCACACATGCACCTAGCTaGCTGCCCAGCGGGCCCTCGCTCTCCCTTGCCTTTTTGGTCAGT +
Preference number: 1 (lower is better)
Translates to: PTAEGGWPAATHAPS*LPSGPSLSLAFLVS
Trigger: ACTGACCAAAAAGGCAAGGGAGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGTGGCCGCAGGCCAGCCTCCCTCGGCTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR GCA 90 bp TGTGACCTCAGGCTCCGTCACAGGCCAGCATGCCCAGGGCGGGTCTaGACCTTGGCGCAGCTGGAGCCAGCTACCCGTATGGGATGGAGC +
Preference number: 1 (lower is better)
Translates to: CDLRLRHRPACPGRV*TLAQLEPATRMGWS
Trigger: GCTCCATCCCATACGGGTAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCATGCTGGCCTGTGACGGAGCCTGAGGTCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR GCA 90 bp TGGGGCCATAGGTGCGGGAGAGCAGGACTCACTGAAACGCCCAGGTaGCGCCCGGGACAGGGCTCAGCGCCACATGCCACTCTTCCCGAA +
Preference number: 1 (lower is better)
Translates to: WGHRCGRAGLTETPR*RPGQGSAPHATLPE
Trigger: TTCGGGAAGAGTGGCATGTGGCGCTGAGCCCTGTCCCGGGCGGCACCTGGGCGTTTCAGTGAGTCCTGCTCTCCCGCACCTATGGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
3UTR CCA 90 bp TCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTaGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGG +
Preference number: 1 (lower is better)
Translates to: SNPTFTGLHIVVGKD*PPRKLPAHRSPCSR
Trigger: CCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR CCA 90 bp CCCTGTGCTTGGGCCGGCCTCCCCCTCACCTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCACTCCTGGACTCGAACCGGTTCCCCC +
Preference number: 1 (lower is better)
Translates to: PCAWAGLPLTCYSSL*SLRSPHSWTRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCAGGTGAGGGGGAGGCCGGCCCAAGCACAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR GCA 90 bp CAGCCGAGGGAGGCTGGCCTGCGGCCACACATGCACCTAGCTGACTaGCCAGCGGGCCCTCGCTCTCCCTTGCCTTTTTGGTCAGTCTCA +
Preference number: 1 (lower is better)
Translates to: QPREAGLRPHMHLAD*PAGPRSPLPFWSVS
Trigger: TGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGTGGCCGCAGGCCAGCCTCCCTCGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR GCA 90 bp CAGTCCAGGTCAGCGTCAGGTGCACGTCCACTGTCCCTGCTAAGCTaGCCGCACAGTCCAGCCCTCTGGCCACCACTGCCAGAAGCCTCC +
Preference number: 1 (lower is better)
Translates to: QSRSASGARPLSLLS*PHSPALWPPLPEAS
Trigger: GGAGGCTTCTGGCAGTGGTGGCCAGAGGGCTGGACTGTGCGGGCAGCTTAGCAGGGACAGTGGACGTGCACCTGACGCTGACCTGGACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CCA 90 bp GTCACAGGCCAGCATGCCCAGGGCGGGTCTGCACCTTGGCGCAGCTaGAGCCAGCTACCCGTATGGGATGGAGCTATGTGGGCCAGTGTG +
Preference number: 1 (lower is better)
Translates to: VTGQHAQGGSAPWRS*SQLPVWDGAMWASV
Trigger: CACACTGGCCCACATAGCTCCATCCCATACGGGTAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCATGCTGGCCTGTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CCA 90 bp TCAGGCTCCGTCACAGGCCAGCATGCCCAGGGCGGGTCTGCACCTTaGCGCAGCTGGAGCCAGCTACCCGTATGGGATGGAGCTATGTGG +
Preference number: 1 (lower is better)
Translates to: SGSVTGQHAQGGSAP*RSWSQLPVWDGAMW
Trigger: CCACATAGCTCCATCCCATACGGGTAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCATGCTGGCCTGTGACGGAGCCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR TCA 90 bp GCCCTGGGATGCCACGTGCCTCTGCTCTCTGGCCTGCTTCTAGACTaGGGCAGTCCAGGTCAGCGTCAGGTGCACGTCCACTGTCCCTGC +
Preference number: 1 (lower is better)
Translates to: ALGCHVPLLSGLLLD*GSPGQRQVHVHCPC
Trigger: GCAGGGACAGTGGACGTGCACCTGACGCTGACCTGGACTGCCTCAGTCTAGAAGCAGGCCAGAGAGCAGAGGCACGTGGCATCCCAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR GCA 90 bp CTCTCAGGCCACCCTTCCCCGAGTCCTGGCCGGGCCCCTTCAACCTaGCAAAGCAAAGCAGCGTTACTCCCAACGTCCTCCACAGGGCTC +
Preference number: 1 (lower is better)
Translates to: LSGHPSPSPGRAPST*QSKAALLPTSSTGL
Trigger: GAGCCCTGTGGAGGACGTTGGGAGTAACGCTGCTTTGCTTTGGCAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGGTGGCCTGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR TCA 90 bp GGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTGCTCTCAGGCCACCCTTCCCCGAGT +
Preference number: 1 (lower is better)
Translates to: GCLQLLFQVKSLLGQ*PQRSSLLSGHPSPS
Trigger: ACTCGGGGAAGGGTGGCCTGAGAGCAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
ENST00000592234.5
3UTR TCA 90 bp CCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTaGCTTACCGTAACTGTCATAACTGTCTCTGTAGGACCCGCCCGA +
Preference number: 1 (lower is better)
Translates to: PSSHRRPQQRGALGV*LTVTVITVSVGPAR
Trigger: TCGGGCGGGTCCTACAGAGACAGTTATGACAGTTACGGTAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR GCA 90 bp GAATGTCCTGAGCAGTCTCCTCTCCTCTTGGCCTGGGTCCCCACCTaGCTCTGCTCCTTGCCCAGCCAGTCTCATCTCAGCTCCCCCAGG +
Preference number: 1 (lower is better)
Translates to: ECPEQSPLLLAWVPT*LCSLPSQSHLSSPR
Trigger: CCTGGGGGAGCTGAGATGAGACTGGCTGGGCAAGGAGCAGAGGCAGGTGGGGACCCAGGCCAAGAGGAGAGGAGACTGCTCAGGACATTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR CCA 90 bp TGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTaGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCC +
Preference number: 1 (lower is better)
Translates to: WPFIRIRLSQGSTSL*ARTGRPVSCRRTAA
Trigger: GGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR TCA 90 bp GACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGTGACCCCAGAGGTCATCGCTGCTCT +
Preference number: 1 (lower is better)
Translates to: DKPPGQAAASSSCSR*SPSWDSDPRGHRCS
Trigger: AGAGCAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
ENST00000592234.5
3UTR GCA 90 bp TCTGCTGGGCCTCCCTTTCTAGCTCTGCAGGCCCCAGGGAAGGCTTaGAGACCCGCTGCTTCTCCACCTTCTCTCTCTGCTCAGGTCTGG +
Preference number: 1 (lower is better)
Translates to: SAGPPFLALQAPGKA*RPAASPPSLSAQVW
Trigger: CCAGACCTGAGCAGAGAGAGAAGGTGGAGAAGCAGCGGGTCTGCAAGCCTTCCCTGGGGCCTGCAGAGCTAGAAAGGGAGGCCCAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR TCA 90 bp AGAACTCGTGAAGCAACAGCAGAACTAGCTAACCGGCTGGCCGTCTaGGGTCGCCCTGGGATGCCACGTGCCTCTGCTCTCTGGCCTGCT +
Preference number: 1 (lower is better)
Translates to: RTREATAELANRLAV*GRPGMPRASALWPA
Trigger: AGCAGGCCAGAGAGCAGAGGCACGTGGCATCCCAGGGCGACCTCAGACGGCCAGCCGGTTAGCTAGTTCTGCTGTTGCTTCACGAGTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR GCA 90 bp CGGCAGAGCCACCACGGTACCCACGGGATCGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGATCTGCCGTCCATCTACAGACTTCC +
Preference number: 1 (lower is better)
Translates to: RQSHHGTHGIGCLTT*LPGLLGSAVHLQTS
Trigger: GGAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTACCGTGGTGGCTCTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
3UTR GCA 90 bp GCAGACCCGCTGCTTCTCCACCTTCTCTCTCTGCTCAGGTCTGGCTaGAGGAGCCCGCAGCAAGGAGTGTGTGGTGCAATGCAAGGGAAT +
Preference number: 1 (lower is better)
Translates to: ADPLLLHLLSLLRSG*RSPQQGVCGAMQGN
Trigger: ATTCCCTTGCATTGCACCACACACTCCTTGCTGCGGGCTCCTGCAGCCAGACCTGAGCAGAGAGAGAAGGTGGAGAAGCAGCGGGTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CCA 90 bp CCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTC +
Preference number: 1 (lower is better)
Translates to: PHATLPESTYRGQAS*ASGCLQLLFQVKSL
Trigger: GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
3UTR TCA 90 bp TGGCCGGGCCCCTTCAACCTCGAATTACAGGGCTATTTCCACATATaGGCTAGCCAAGGGAGCAGCTTGCGTCTCAGAGGGTTCTGTTGG +
Preference number: 1 (lower is better)
Translates to: WPGPFNLELQGYFHI*ASQGSSLRLRGFCW
Trigger: CCAACAGAACCCTCTGAGACGCAAGCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGCCCTGTAATTCGAGGTTGAAGGGGCCCGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444172.6
ENST00000585914.5
3UTR TCA 90 bp CACTGTAGCCACCACTCTGACTCCGGCTGCAAGACAGACAAACGTTaGGTACCGGAAGGTACCCGTCTACTTCTGCTCTGCCACAACAGG +
Preference number: 1 (lower is better)
Translates to: HCSHHSDSGCKTDKR*VPEGTRLLLLCHNR
Trigger: CCTGTTGTGGCAGAGCAGAAGTAGACGGGTACCTTCCGGTACTCAACGTTTGTCTGTCTTGCAGCCGGAGTCAGAGTGGTGGCTACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR GCA 90 bp TCTGCTCAGGTCTGGCTGCAGGAGCCCGCAGCAAGGAGTGTGTGGTaGAATGCAAGGGAATTGTCAGAGCAAGGTTCATTTCACACGGTC +
Preference number: 1 (lower is better)
Translates to: SAQVWLQEPAARSVW*NARELSEQGSFHTV
Trigger: GACCGTGTGAAATGAACCTTGCTCTGACAATTCCCTTGCATTGCACCACACACTCCTTGCTGCGGGCTCCTGCAGCCAGACCTGAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CCA 90 bp CTCTCTGCTCAGGTCTGGCTGCAGGAGCCCGCAGCAAGGAGTGTGTaGTGCAATGCAAGGGAATTGTCAGAGCAAGGTTCATTTCACACG +
Preference number: 1 (lower is better)
Translates to: LSAQVWLQEPAARSV*CNARELSEQGSFHT
Trigger: CGTGTGAAATGAACCTTGCTCTGACAATTCCCTTGCATTGCACCACACACTCCTTGCTGCGGGCTCCTGCAGCCAGACCTGAGCAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR TCA 90 bp CTAGTAACGAGGCCATCCCGGCGTCAGAAGCGGTCAGGCTGGGTTTaGCAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGG +
Preference number: 1 (lower is better)
Translates to: LVTRPSRRQKRSGWV*QDQNRNDYESGNTR
Trigger: CCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGCTTCTGACGCCGGGATGGCCTCGTTACTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
3UTR TCA 90 bp ACGAGCGGAAGGAGTTACCTCGAATTACAGGGCTATTTCCACATATaGGCTAGCCAAGGGAGCAGCTTGCGTCTCAGAGGGTTCTGTTGG +
Preference number: 1 (lower is better)
Translates to: TSGRSYLELQGYFHI*ASQGSSLRLRGFCW
Trigger: CCAACAGAACCCTCTGAGACGCAAGCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGCCCTGTAATTCGAGGTAACTCCTTCCGCTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR GCA 90 bp TCAGGTCTGGCTGCAGGAGCCCGCAGCAAGGAGTGTGTGGTGCAATaGAAGGGAATTGTCAGAGCAAGGTTCATTTCACACGGTCTTTTA +
Preference number: 1 (lower is better)
Translates to: SGLAAGARSKECVVQ*KGIVRARFISHGLL
Trigger: TAAAAGACCGTGTGAAATGAACCTTGCTCTGACAATTCCCTTGCATTGCACCACACACTCCTTGCTGCGGGCTCCTGCAGCCAGACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CCA 90 bp TTCCCCGGGCACATGACTTTCAGTGAGCTCTCAACAAGAGGGATGTaGACACGAGCGGAAGGAGTTACCTCGAATTACAGGGCTATTTCC +
Preference number: 1 (lower is better)
Translates to: FPGHMTFSELSTRGM*TRAEGVTSNYRAIS
Trigger: GGAAATAGCCCTGTAATTCGAGGTAACTCCTTCCGCTCGTGTCCACATCCCTCTTGTTGAGAGCTCACTGAAAGTCATGTGCCCGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR GCA 90 bp AAGGACAATATAAATAAACATCTTCAAGAACCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGCACAGCACAGATGGACGCAGGGGCT +
Preference number: 1 (lower is better)
Translates to: KDNINKHLQEPLRDV*TSTVGRTAQMDAGA
Trigger: AGCCCCTGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTATTTATATTGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR TCA 90 bp GCGTCAGAAGCGGTCAGGCTGGGTTTGACAAGATCAGAACCGAAATaGCTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACATT +
Preference number: 1 (lower is better)
Translates to: ASEAVRLGLTRSEPK*LRKWEYKEVHLLHI
Trigger: AATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGCTTCTGACGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
3UTR GCA 90 bp CAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTaGATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTT +
Preference number: 1 (lower is better)
Translates to: QDQNRNDYESGNTRR*IYYTLTFSEAPTIF
Trigger: AAAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
3UTR GCA 90 bp CTTCGTAAAGCCAAAGAAAACTGCGTACAAGAATTCCTCAGCCACTaGAAATACAACATCGATGGAGTATGCGTACGTCTTCCAGTAAAA +
Preference number: 1 (lower is better)
Translates to: LRKAKENCVQEFLSH*KYNIDGVCVRLPVK
Trigger: TTTTACTGGAAGACGTACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR GCA 90 bp CATTTCACACGGTCTTTTAATCGGCTTCGTAAAGCCAAAGAAAACTaGGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGA +
Preference number: 1 (lower is better)
Translates to: HFTRSFNRLRKAKEN*VQEFLSHCKYNIDG
Trigger: TCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAGCCGATTAAAAGACCGTGTGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR TCA 90 bp AAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 2 (lower is better)
Translates to: KDWPPRKLPAHRSPCSRRRDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...TCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp ATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 2 (lower is better)
Translates to: IVVGKDWPPRKLPAHRSPRDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...CGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp CCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 2 (lower is better)
Translates to: PVSCRRTAARAPGETRGPRDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...AGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp AGCTTCACCCCAGAGGCCAGACCAGGGCGCGGCCTGCGGCCGGGGAGCAACCACACACATGCACCTAGCTaGCTGCCCAGCGGGCCCTCG +
Preference number: 2 (lower is better)
Translates to: SFTPEARPGRGLRPGSNHTHAPS*LPSGPS
Trigger: CGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGT...GTGGTTGCTCCCCGGCCGCAGGCCGCGCCCTGGTCTGGCCTCTGGGGTGAAGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR GCA 90 bp GGGAGGCGCTGCCCTGCACCCAACACACACCGAAAGGCGCCCGCCATGGGGCCAGCTCCCGGGAGGCGCTaGCCTGCACCCAACACACAC +
Preference number: 2 (lower is better)
Translates to: GRRCPAPNTHRKAPAMGPAPGRR*PAPNTH
Trigger: GTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGC...TGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
3UTR-3UTR TCA 90 bp GGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGATCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 2 (lower is better)
Translates to: GRPVSCRRTAARAPGETRSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...TCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp CGCACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 2 (lower is better)
Translates to: RTSLAKRLRGQASWASGCRDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...GCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR CCA 90 bp CCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAG +
Preference number: 2 (lower is better)
Translates to: PQPVLQERLEALSPHLTGRGQAS*ASGCLQ
Trigger: CTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT...GCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR CCA 90 bp AAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAG +
Preference number: 2 (lower is better)
Translates to: KDWPPRKLPAHRSPCSRRRGQAS*ASGCLQ
Trigger: CTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT...TCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR GCA 90 bp CAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCACCGCAGCCCGTaGTCCAGGAGAGACTCGAGG +
Preference number: 2 (lower is better)
Translates to: QPVLQERLEALSPHLTGEAHRSP*SRRDSR
Trigger: CCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGC...TTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR GCA 90 bp ACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTGACTTACGCGCACCGCAGCCCGTaGTCCAGGAGAGACTCGAGG +
Preference number: 2 (lower is better)
Translates to: TELPPQATAAWRPRSVTYAHRSP*SRRDSR
Trigger: CCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGC...GTAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp CAGGCTCCGTCACAGGCCAGCATGCCCAGGGCGGGTCTGCACCTTGGCGCAGCTACTGAAACGCCCAGGTaGCGCCCGGGACAGGGCTCA +
Preference number: 2 (lower is better)
Translates to: QAPSQASMPRAGLHLGAATETPR*RPGQGS
Trigger: TGAGCCCTGTCCCGGGCGGCACCTGGGCGTTTCAGT...AGCTGCGCCAAGGTGCAGACCCGCCCTGGGCATGCTGGCCTGTGACGGAGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587896.6
3UTR-3UTR CCA 90 bp ACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAG +
Preference number: 2 (lower is better)
Translates to: TSLWARTGRPVSCRRTAARGQAS*ASGCLQ
Trigger: CTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT...GGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR CCA 90 bp ACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGGAGCCCGCACCTCACTaGCGAAGCGCCTCAGGGGAC +
Preference number: 2 (lower is better)
Translates to: TGLHIVVGKDWPPRKLPAEPAPH*RSASGD
Trigger: GTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTC...CGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR CCA 90 bp CCTCCTCCTCTAGAGAACCCACGGCCCCGTCCTCGGCCCCCACGGAAGAAGCCCCAGGCCACAGCAGCGTaGCGCCCTCGGAGTGTGACT +
Preference number: 2 (lower is better)
Translates to: PPPLENPRPRPRPPRKKPQATAA*RPRSVT
Trigger: AGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTG...GGGCTTCTTCCGTGGGGGCCGAGGACGGGGCCGTGGGTTCTCTAGAGGAGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
3UTR-3UTR TCA 90 bp CCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGTCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 2 (lower is better)
Translates to: PVLQERLEALSPHLTGEASLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...CGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp ACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCGAGAGGGCACCAAGGTaGACCGAGCTCCCACCGCAG +
Preference number: 2 (lower is better)
Translates to: TSLAKRLRGQASWASGCLERAPR*TELPPQ
Trigger: CTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTCTC...GAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp AAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGATCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 2 (lower is better)
Translates to: KDWPPRKLPAHRSPCSRRSWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...TCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR GCA 90 bp GCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTCCTGGGCTCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 2 (lower is better)
Translates to: ALSPHLTGEAPQGTSLLGSWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...GCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR CCA 90 bp CTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCTTCCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCTC +
Preference number: 2 (lower is better)
Translates to: LQERLEALSPHLTGEAPLPFPES*PGPFNL
Trigger: GAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGG...AAGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585914.5
3UTR-3UTR TCA 90 bp ACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTTCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 2 (lower is better)
Translates to: TRGPEPAPHWRSASGDKPSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...AGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp TGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 2 (lower is better)
Translates to: WARTGRPVSCRRTAARAPSSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...TGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR GCA 90 bp ACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTGACTTACATGCACCTAGCTGACTaGCCAGCGGGCCCTCGCTCT +
Preference number: 2 (lower is better)
Translates to: TELPPQATAAWRPRSVTYMHLAD*PAGPRS
Trigger: AGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCAT...GTAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR GCA 90 bp ACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGGGGCTCAGCGCCACATaGCACTCTTCCCGAAAGCAC +
Preference number: 2 (lower is better)
Translates to: TAARAPGETRGPEPAPHWGLSAT*HSSRKH
Trigger: GTGCTTTCGGGAAGAGTGGCATGTGGCGCTGAGCCC...CCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
3UTR-3UTR CCA 90 bp GCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCAGAGGGTTCTGTTaGGCGCACAACACTTCTGTC +
Preference number: 2 (lower is better)
Translates to: AGAPQPVLQERLEALSPHLRGFC*AHNTSV
Trigger: GACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAG...GTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR CCA 90 bp AGCATGCCCAGGGCGGGTCTGCACCTTGGCGCAGCTGGAGCCAGCTACCCGTATGGCTCCACATCGTTGTaGGCAAGGACTGGCCGCCCC +
Preference number: 2 (lower is better)
Translates to: SMPRAGLHLGAAGASYPYGSTSL*ARTGRP
Trigger: GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCC...ATACGGGTAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCATGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CAA 90 bp CTCAGGCTCCGTCACAGGCCAGCATGCCCAGGGCGGGTCTGCACCTaGGCGCAGCTGGAGCCAGCTACCCGTATGGGATGGAGCTATGTG +
Preference number: 2 (lower is better)
Translates to: LRLRHRPACPGRVCT*AQLEPATRMGWSYV
Trigger: CACATAGCTCCATCCCATACGGGTAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCATGCTGGCCTGTGACGGAGCCTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR TCA 90 bp AGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGGGCTATTTCCACATATaGGCTAGCCAAGGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: RTGRPVSCRRTAARAPGEGYFHI*ASQGSS
Trigger: GCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGCC...CTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp AGCGCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCTCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 2 (lower is better)
Translates to: SASGDKPPGQAAASSSCSSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...GGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR GCA 90 bp ACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGTCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 2 (lower is better)
Translates to: TGLHIVVGKDWPPRKLPASWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...CGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR GCA 90 bp TCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCATCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 2 (lower is better)
Translates to: STSLWARTGRPVSCRRTASWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...TGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR GCA 90 bp GAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGGCGCACCGCAGCCCGTaGTCCAGGAGAGACTCGAGG +
Preference number: 2 (lower is better)
Translates to: ESDFHRAPHRCGQGLAAPAHRSP*SRRDSR
Trigger: CCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGC...CGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR CCA 90 bp TTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGTTGTGGGCAAGGACTaGCCGCCCCGTAAGCTGCCG +
Preference number: 2 (lower is better)
Translates to: FTGLHIVVGKDWPPRKLPVVGKD*PPRKLP
Trigger: CGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAAC...CGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp CCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 2 (lower is better)
Translates to: PVLQERLEALSPHLTGEASSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...CGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp ACCGGCTGGCCGTCTGAGGTCGCCCTGGGATGCCACGTGCCTCTGCTCTCTGGCAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 2 (lower is better)
Translates to: TGWPSEVALGCHVPLLSGSSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...GCCAGAGAGCAGAGGCACGTGGCATCCCAGGGCGACCTCAGACGGCCAGCCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR TCA 90 bp ACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 2 (lower is better)
Translates to: TAARAPGETRGPEPAPHWSSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...CCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp ATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 2 (lower is better)
Translates to: IRLSQGSTSLWARTGRPVRDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...TACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp GGCACCAAGGTGAACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGCACAGTGACAAGGTCTaGGTGTCCAGCCTAAAGTGC +
Preference number: 2 (lower is better)
Translates to: GTKVNRAPTAGHSSVAPSHSDKV*VSSLKC
Trigger: GCACTTTAGGCTGGACACTCAGACCTTGTCACTGTG...CGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTTGGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR GCA 90 bp AGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTCATGGGGCCAACCCGGGCTCCAGGGCAGTTaGTGCCACACCCGCCGGGGT +
Preference number: 2 (lower is better)
Translates to: SPFDLREVSGAPTSWGQPGLQGS*CHTRRG
Trigger: ACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCC...GGGTTGGCCCCATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp CCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTCCCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCTC +
Preference number: 2 (lower is better)
Translates to: PPALVPGEVPPGTVTPEVPFPES*PGPFNL
Trigger: GAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGG...GACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000592234.5
3UTR-3UTR CCA 90 bp CCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGACGCAGTTGTGGGCAAGGACTaGCCGCCCCGTAAGCTGCCG +
Preference number: 2 (lower is better)
Translates to: PLRDVCTSTVGRTAQMDAVVGKD*PPRKLP
Trigger: CGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAAC...TGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR TCA 90 bp ACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 2 (lower is better)
Translates to: TGLHIVVGKDWPPRKLPASSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...CGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp CTGCGGCCACACATGCACCTAGCTGACTGCCCAGCGGGCCCTCGCTCTCCCTTGAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 2 (lower is better)
Translates to: LRPHMHLADCPAGPRSPLSSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...CAAGGGAGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGTGGCCGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR TCA 90 bp GAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGACAGGCGCCCTCGGAGTGTaGCTTACCGTAACTGTCATA +
Preference number: 2 (lower is better)
Translates to: ERLEALSPHLTGEAPQGTGALGV*LTVTVI
Trigger: TATGACAGTTACGGTAAGTCACACTCCGAGGGCGCC...TGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp ATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACGGGCTCCAGGGCAGTTaGTGCCACACCCGCCGGGGT +
Preference number: 2 (lower is better)
Translates to: IFKNLSGTSARLLWGAQHGLQGS*CHTRRG
Trigger: ACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCC...GTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp CACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGAGTTGGAAAGGGCTCCAGGGCAGTTaGTGCCACACCCGCCGGGGT +
Preference number: 2 (lower is better)
Translates to: HPPGSYHTTLRNVTRSWKGLQGS*CHTRRG
Trigger: ACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCC...TTTCCAACTCCGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp ACATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCGGGCTCCAGGGCAGTTaGTGCCACACCCGCCGGGGT +
Preference number: 2 (lower is better)
Translates to: TSSRTSQGRLHVYCGAHSGLQGS*CHTRRG
Trigger: ACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCC...GCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp CCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACCCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGC +
Preference number: 2 (lower is better)
Translates to: PGQLLPHPPGSYHTTLRNPLRDV*TSTVGR
Trigger: GCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG...GTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp CTGCGGCCACACATGCACCTAGCTGACTGCCCAGCGGGCCCTCGCTCTCCCTTGGTGTCCAGCCTAAAGTaGTTGGAGAGGGCACCAAGG +
Preference number: 2 (lower is better)
Translates to: LRPHMHLADCPAGPRSPLVSSLK*LERAPR
Trigger: CCTTGGTGCCCTCTCCAAGCACTTTAGGCTGGACAC...CAAGGGAGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGTGGCCGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR GCA 90 bp GTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGACTCGGCTTTCTGGGTaGACACGTGGCCCTTTATTC +
Preference number: 2 (lower is better)
Translates to: VSCRRTAARAPGETRGPETRLSG*TRGPLF
Trigger: GAATAAAGGGCCACGTGTGCACCCAGAAAGCCGAGT...CTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586636.5
ENST00000591376.5
3UTR-3UTR CCA 90 bp AGCATGCCCAGGGCGGGTCTGCACCTTGGCGCAGCTGGAGCCAGCTACCCGTATTCTGCACGTCTACTGTaGGGCGCACAGCACAGATGG +
Preference number: 2 (lower is better)
Translates to: SMPRAGLHLGAAGASYPYSARLL*GAQHRW
Trigger: CCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGA...ATACGGGTAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCATGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR CCA 90 bp GCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAG +
Preference number: 2 (lower is better)
Translates to: AVAATPAGVLPHYTQKRHRGQAS*ASGCLQ
Trigger: CTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT...GTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR CCA 90 bp GCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACGAAAGGCGCCCGCCATaGGGCCATAGGTGCGGGAGA +
Preference number: 2 (lower is better)
Translates to: AVAATPAGVLPHYTQKRHERRPP*GHRCGR
Trigger: TCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTC...GTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587896.6
3UTR-3UTR CCA 90 bp GCTCTCTGGCCTGCTTCTAGACTGAGGCAGTCCAGGTCAGCGTCAGGTGCACGTGAGCCCGCACCTCACTaGCGAAGCGCCTCCTGGAAG +
Preference number: 2 (lower is better)
Translates to: ALWPASRLRQSRSASGAREPAPH*RSASWK
Trigger: CTTCCAGGAGGCGCTTCGCCAGTGAGGTGCGGGCTC...ACGTGCACCTGACGCTGACCTGGACTGCCTCAGTCTAGAAGCAGGCCAGAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587896.6
3UTR-3UTR CCA 90 bp ATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAGAGCCCGCACCTCACTaGCGAAGCGCAGGGGACAAG +
Preference number: 2 (lower is better)
Translates to: IRLSQGSTSLWARTGRPVEPAPH*RSAGDK
Trigger: CTTGTCCCCTGCGCTTCGCCAGTGAGGTGCGGGCTC...TACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585913.5
3UTR CAA 90 bp ACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTaGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCA +
Preference number: 2 (lower is better)
Translates to: TWPFIRIRLSQGSTS*WARTGRPVSCRRTA
Trigger: TGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp ACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGGGCTATTTCCACATATaGGCTAGCCAAGGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: TGLHIVVGKDWPPRKLPAGYFHI*ASQGSS
Trigger: GCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGCC...CGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp GCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGGCTATTTCCACATATaGGCTAGCCAAGGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: APGETRGPEPAPHWRSASGYFHI*ASQGSS
Trigger: GCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGCC...TGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000444172.6
ENST00000587169.5
ENST00000590347.5
ENST00000592234.5
3UTR-3UTR GCA 90 bp GAGGGCACCAAGGTGAACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTTGGCTTTTGCGTCCTaGGATAGAAATGGCTCTGAG +
Preference number: 2 (lower is better)
Translates to: EGTKVNRAPTAGHSSVAPLAFAS*DRNGSE
Trigger: CTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAA...GGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR GCA 90 bp GCTTGCGTCTCAGAGGGTTCTGTTGGGCGCACAACACTTCTGTCCTCCGAGGGCATGCACCTAGCTGACTaGCCAGCGGGCCCTCGCTCT +
Preference number: 2 (lower is better)
Translates to: ACVSEGSVGRTTLLSSEGMHLAD*PAGPRS
Trigger: AGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCAT...GCCCTCGGAGGACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGACGCAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp CAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCGGGCTCAGCGCCACATaGCACTCTTCCCGAAAGCAC +
Preference number: 2 (lower is better)
Translates to: QASWASGCLQLLFQVKSLGLSAT*HSSRKH
Trigger: GTGCTTTCGGGAAGAGTGGCATGTGGCGCTGAGCCC...GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
3UTR-3UTR CCA 90 bp TCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCACTCAGAGGGTTCTGTTaGGCGCACAACACTTCTGTC +
Preference number: 2 (lower is better)
Translates to: STSLWARTGRPVSCRRTALRGFC*AHNTSV
Trigger: GACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAG...TGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR CCA 90 bp GCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGATTGGTCAGTCTCATTTaGCTTTTGCGTCCTGCGATA +
Preference number: 2 (lower is better)
Translates to: ARTGRPVSCRRTAARAPGLVSLI*LLRPAI
Trigger: TATCGCAGGACGCAAAAGCCAAATGAGACTGACCAA...TCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp CAAGGTCTGAGTGTCCAGCCTAAAGTGCTTGGAGAGGGCACCAAGGTGAACCGAGCTCCCCCAGGGACCTaGGACCCGGGACGGAAGCTG +
Preference number: 2 (lower is better)
Translates to: QGLSVQPKVLGEGTKVNRAPPGT*DPGRKL
Trigger: CAGCTTCCGTCCCGGGTCCCAGGTCCCTGGGGGAGC...TCGGTTCACCTTGGTGCCCTCTCCAAGCACTTTAGGCTGGACACTCAGACCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR CAA 90 bp CCGGCAGAGCCACCACGGTACCCACGGGATCGGTTGTCTGACGACTaGCCTGCCTGGTCTACTCGGATCTGCCGTCCATCTACAGACTTC +
Preference number: 2 (lower is better)
Translates to: PAEPPRYPRDRLSDD*PAWSTRICRPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTACCGTGGTGGCTCTGCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
3UTR-3UTR TCA 90 bp CAGCTTCACCCCAGAGGCCAGACCAGGGCGCGGCCTGCGGCCGGGGAGCAACCAAGATCAGAACCGAAATaGCTACGAAAGTGGGAATAC +
Preference number: 2 (lower is better)
Translates to: QLHPRGQTRARPAAGEQPRSEPK*LRKWEY
Trigger: GTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCT...TGGTTGCTCCCCGGCCGCAGGCCGCGCCCTGGTCTGGCCTCTGGGGTGAAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR TCA 90 bp GCTCAGCGCCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTTCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 2 (lower is better)
Translates to: AQRHMPLFPKALTGDKPPSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...AGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGCGCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
3UTR-3UTR GCA 90 bp AGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACCCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGC +
Preference number: 2 (lower is better)
Translates to: SCCHTRRGPTTLHSETSHPLRDV*TSTVGR
Trigger: GCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG...GTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp GGACAGATGCGCCTCTTCTGGGCAAGCACAGTGACAAGGTCTGAGTGTCCAGCCATGCACCTAGCTGACTaGCCAGCGGGCCCTCGCTCT +
Preference number: 2 (lower is better)
Translates to: GQMRLFWASTVTRSECPAMHLAD*PAGPRS
Trigger: AGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCAT...GGCTGGACACTCAGACCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR CCA 90 bp ACATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCGGCTCCACATCGTTGTaGGCAAGGACTGGCCGCCCC +
Preference number: 2 (lower is better)
Translates to: TSSRTSQGRLHVYCGAHSGSTSL*ARTGRP
Trigger: GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCC...GCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR CCA 90 bp AGCAGGCACAGTGTAAAGGCACCGAAGCAACAAGAGGCAGCTTCACCCCAGAGGCAGGCCACAGCAGCGTaGCGCCCTCGGAGTGTGACT +
Preference number: 2 (lower is better)
Translates to: SRHSVKAPKQQEAASPQRQATAA*RPRSVT
Trigger: AGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTG...CCTCTGGGGTGAAGCTGCCTCTTGTTGCTTCGGTGCCTTTACACTGTGCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR TCA 90 bp GCTCTCAGGCCACCCTTCCCCGAGTCCTGGCCGGGCCCCTTCAACCTCGAATTAGGCTATTTCCACATATaGGCTAGCCAAGGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: ALRPPFPESWPGPFNLELGYFHI*ASQGSS
Trigger: GCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGCC...TAATTCGAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGGTGGCCTGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp GTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 2 (lower is better)
Translates to: VHTWPFIRIRLSQGSTSLRDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...CAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp GAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTCAACACATGCACCTAGCTaGCTGCCCAGCGGGCCCTCG +
Preference number: 2 (lower is better)
Translates to: ERIHSPFDLREVSGAPTSTHAPS*LPSGPS
Trigger: CGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGT...TGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp ATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACCCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGC +
Preference number: 2 (lower is better)
Translates to: IFKNLSGTSARLLWGAQHPLRDV*TSTVGR
Trigger: GCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG...GTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp AGCTTCACCCCAGAGGCCAGACCAGGGCGCGGCCTGCGGCCGGGGAGCAACCACAACATCGATGGAGTATaGGTACGTCTTCCAGTAAAA +
Preference number: 2 (lower is better)
Translates to: SFTPEARPGRGLRPGSNHNIDGV*VRLPVK
Trigger: TTTTACTGGAAGACGTACGCATACTCCATCGATGTT...GTGGTTGCTCCCCGGCCGCAGGCCGCGCCCTGGTCTGGCCTCTGGGGTGAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp GCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGCGCACCGCAGCCCGTaGTCCAGGAGAGACTCGAGG +
Preference number: 2 (lower is better)
Translates to: AHVALYSNPTFTGLHIVVAHRSP*SRRDSR
Trigger: CCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGC...CACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR GCA 90 bp GCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGCTCCCGGGAGGCGCTaGCCTGCACCCAACACACAC +
Preference number: 2 (lower is better)
Translates to: AHVALYSNPTFTGLHIVVAPGRR*PAPNTH
Trigger: GTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGC...CACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
3UTR-3UTR CCA 90 bp GTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGCCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCTC +
Preference number: 2 (lower is better)
Translates to: VHTWPFIRIRLSQGSTSLPFPES*PGPFNL
Trigger: GAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGG...CAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444172.6
ENST00000592234.5
3UTR-3UTR CCA 90 bp CACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAG +
Preference number: 2 (lower is better)
Translates to: HVALYSNPTFTGLHIVVGRGQAS*ASGCLQ
Trigger: CTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT...GCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR CCA 90 bp TATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCAGGCCACAGCAGCGTaGCGCCCTCGGAGTGTGACT +
Preference number: 2 (lower is better)
Translates to: YSNPTFTGLHIVVGKDWPQATAA*RPRSVT
Trigger: AGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTG...CGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp ACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAGCAGGACTCACTGGCAGCAAGGAGTGTGTaGTGCAATGCAAGGGAATTG +
Preference number: 2 (lower is better)
Translates to: TPKGARHGAIGAGEQDSLAARSV*CNAREL
Trigger: CAATTCCCTTGCATTGCACCACACACTCCTTGCTGC...CAGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587896.6
3UTR-3UTR CCA 90 bp GAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGACAGACTCGGCTTTCTaGGTGCACACGTGGCCCTTT +
Preference number: 2 (lower is better)
Translates to: ESDFHRAPHRCGQGLAAPTDSAF*VHTWPF
Trigger: AAAGGGCCACGTGTGCACCCAGAAAGCCGAGTCTGT...CGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586636.5
ENST00000591376.5
3UTR-3UTR TCA 90 bp GCTTGCGTCTCAGAGGGTTCTGTTGGGCGCACAACACTTCTGTCCTCCGAGGGCAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 2 (lower is better)
Translates to: ACVSEGSVGRTTLLSSEGSSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...GCCCTCGGAGGACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGACGCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR TCA 90 bp GTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGAGAGCAGGACTCACTaGAACGCCCAGGTGCCGCCC +
Preference number: 2 (lower is better)
Translates to: VALYSNPTFTGLHIVVGKESRTH*NAQVPP
Trigger: GGGCGGCACCTGGGCGTTTCAGTGAGTCCTGCTCTC...CTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
3UTR-3UTR GCA 90 bp GAGGGCACCAAGGTGAACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCAACATCGATGGAGTATaGGTACGTCTTCCAGTAAAA +
Preference number: 2 (lower is better)
Translates to: EGTKVNRAPTAGHSSVAPNIDGV*VRLPVK
Trigger: TTTTACTGGAAGACGTACGCATACTCCATCGATGTT...GGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp CTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTGTCCAGCCTAAAGTaGTTGGAGAGGGCACCAAGG +
Preference number: 2 (lower is better)
Translates to: LPPALVPGEVPPGTVTPEVSSLK*LERAPR
Trigger: CCTTGGTGCCCTCTCCAAGCACTTTAGGCTGGACAC...CTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp CTGGGTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCCTGCTCAGGTCTGGCTaGAGGAGCCCGCAGCAAGGA +
Preference number: 2 (lower is better)
Translates to: LGAHVALYSNPTFTGLHILLRSG*RSPQQG
Trigger: TCCTTGCTGCGGGCTCCTGCAGCCAGACCTGAGCAG...GATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCACCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR GCA 90 bp AACCTGCCAAAGCAAAGCAGCGTTACTCCCAACGTCCTCCACAGGGCTCACAGCCCATGGGGCCATAGGTaGGGGAGAGCAGGACTCACT +
Preference number: 2 (lower is better)
Translates to: NLPKQSSVTPNVLHRAHSPWGHR*GRAGLT
Trigger: AGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGG...GCTGTGAGCCCTGTGGAGGACGTTGGGAGTAACGCTGCTTTGCTTTGGCAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587896.6
3UTR-3UTR GCA 90 bp TGGGTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGCGGGAGGCGCTGCCCTaGACCCAACACACACCGAAA +
Preference number: 2 (lower is better)
Translates to: WVHTWPFIRIRLSQGSTSREALP*TQHTPK
Trigger: TTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCG...CGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
3UTR-3UTR CCA 90 bp TCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACTCAGAGGGTTCTGTTaGGCGCACAACACTTCTGTC +
Preference number: 2 (lower is better)
Translates to: SWASGCLQLLFQVKSLLGLRGFC*AHNTSV
Trigger: GACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAG...TCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR CCA 90 bp CCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGAGCCCGCACCTCACTaGCGAAGCGCCTCAGGGGAC +
Preference number: 2 (lower is better)
Translates to: PLFESDFHRAPHRCGQGLEPAPH*RSASGD
Trigger: GTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTC...CAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR CCA 90 bp TGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTCTTCACAGCCGAGGGAGGCTaGCCTGCGGCCACACATGCA +
Preference number: 2 (lower is better)
Translates to: WLLRPAIEMALRGQMRLFTAEGG*PAATHA
Trigger: TGCATGTGTGGCCGCAGGCCAGCCTCCCTCGGCTGT...GAAGAGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR TCA 90 bp TGCTCAGCTTCCGACAAAGAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGGAGAGGGCACCAAGGTaGACCGAGCTCCCACCGCAG +
Preference number: 2 (lower is better)
Translates to: CSASDKERIHSPFDLREVERAPR*TELPPQ
Trigger: CTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTCTC...CACTTCTCTGAGATCGAACGGACTGTGAATCCGCTCTTTGTCGGAAGCTGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR TCA 90 bp GCTCTCTGGCCTGCTTCTAGACTGAGGCAGTCCAGGTCAGCGTCAGGTGCACGTCTCGTTGTGTGTAGCTaGGGACAAGAAGCAGGCACA +
Preference number: 2 (lower is better)
Translates to: ALWPASRLRQSRSASGARLVVCS*GQEAGT
Trigger: TGTGCCTGCTTCTTGTCCTCAGCTACACACAACGAG...ACGTGCACCTGACGCTGACCTGGACTGCCTCAGTCTAGAAGCAGGCCAGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp GGGGCTCCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCCAAATACAACATCGATaGAGTATGCGTACGTCTTCC +
Preference number: 2 (lower is better)
Translates to: GAPGQLLPHPPGSYHTTLQIQHR*SMRTSS
Trigger: GGAAGACGTACGCATACTCCATCGATGTTGTATTTG...GAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp GGACAGATGCGCCTCTTCTGGGCAAGCACAGTGACAAGGTCTGAGTGTCCAGCCCAGATGCGCCTCTTCTaGGCAAGCACAGTGACAAGG +
Preference number: 2 (lower is better)
Translates to: GQMRLFWASTVTRSECPAQMRLF*ASTVTR
Trigger: CCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTG...GGCTGGACACTCAGACCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR CCA 90 bp CCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGAAAGGCGCCCGCCATaGGGCCATAGGTGCGGGAGA +
Preference number: 2 (lower is better)
Translates to: PFIRIRLSQGSTSLWARTERRPP*GHRCGR
Trigger: TCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTC...AGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
3UTR-3UTR TCA 90 bp GACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGACGCAGGGGCTGGGAGATCAGAACCGAAATaGCTACGAAAGTGGGAATAC +
Preference number: 2 (lower is better)
Translates to: DVCTSTVGRTAQMDAGAGRSEPK*LRKWEY
Trigger: GTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCT...CCCAGCCCCTGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR TCA 90 bp CTGCACCCAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAAGATCAGAACCGAAATaGCTACGAAAGTGGGAATAC +
Preference number: 2 (lower is better)
Translates to: LHPTHTERRPPWGHRCGRRSEPK*LRKWEY
Trigger: GTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCT...TCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587896.6
3UTR-3UTR TCA 90 bp CCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGAGTTGGCGGTCAGGCTGGGTTTaGCAAGATCAGAACCGAAAT +
Preference number: 2 (lower is better)
Translates to: PHPPGSYHTTLRNVTRSWRSGWV*QDQNRN
Trigger: ATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCG...CCAACTCCGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR TCA 90 bp AGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCGGTCAGGCTGGGTTTaGCAAGATCAGAACCGAAAT +
Preference number: 2 (lower is better)
Translates to: RAVAATPAGVLPHYTQKRRSGWV*QDQNRN
Trigger: ATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCG...ACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR TCA 90 bp GCTTGCGTCTCAGAGGGTTCTGTTGGGCGCACAACACTTCTGTCCTCCGAGGGCCGGTCAGGCTGGGTTTaGCAAGATCAGAACCGAAAT +
Preference number: 2 (lower is better)
Translates to: ACVSEGSVGRTTLLSSEGRSGWV*QDQNRN
Trigger: ATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCG...GCCCTCGGAGGACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGACGCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR TCA 90 bp CAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGTCGATCTCAGAGAAGTaGGTGGGGCACCCACTTCAT +
Preference number: 2 (lower is better)
Translates to: QEPLRDVCTSTVGRTAQMSISEK*VGHPLH
Trigger: ATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGA...CATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR TCA 90 bp GCGGGGGCGTTCACTGGTCTTCAATCCTGCTTAAGGGATTTCATCTATGAGCCATCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 2 (lower is better)
Translates to: AGAFTGLQSCLRDFIYEPSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...TGGCTCATAGATGAAATCCCTTAAGCAGGATTGAAGACCAGTGAACGCCCCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR TCA 90 bp TACTCGTTGTGTGTAGCTGAGGACAAGAAGCAGGCACAGTGTAAAGGCACCGAAACACATGCACCTAGCTaGCTGCCCAGCGGGCCCTCG +
Preference number: 2 (lower is better)
Translates to: YSLCVAEDKKQAQCKGTETHAPS*LPSGPS
Trigger: CGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGT...TTCGGTGCCTTTACACTGTGCCTGCTTCTTGTCCTCAGCTACACACAACGAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR GCA 90 bp GTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 2 (lower is better)
Translates to: VHTWPFIRIRLSQGSTSLSWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...CAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR GCA 90 bp GGTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTTCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 2 (lower is better)
Translates to: GAHVALYSNPTFTGLHIVSWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...AACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR GCA 90 bp AGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTCATGGGGCCAACCCGCCCTCGCTCTCCCTTaGCTTTTTGGTCAGTCTCAT +
Preference number: 2 (lower is better)
Translates to: SPFDLREVSGAPTSWGQPALALP*LFGQSH
Trigger: ATGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGC...GGGTTGGCCCCATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp CAGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCCTGGGTCCCCACCTaGCTCTGCTCCTTGCCCAGC +
Preference number: 2 (lower is better)
Translates to: QSHLAFASCDRNGSERTDAWVPT*LCSLPS
Trigger: GCTGGGCAAGGAGCAGAGGCAGGTGGGGACCCAGGC...ATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR CAA 90 bp GCCCAGCGGGCCCTCGCTCTCCCTTGCCTTTTTGGTCAGTCTCATTaGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGAT +
Preference number: 2 (lower is better)
Translates to: AQRALALPCLFGQSH*AFASCDRNGSERTD
Trigger: ATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGCCCGCTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR TCA 90 bp CAGGCACAGTGTAAAGGCACCGAAGCAACAAGAGGCAGCTTCACCCCAGAGGCCCGGTCAGGCTGGGTTTaGCAAGATCAGAACCGAAAT +
Preference number: 2 (lower is better)
Translates to: QAQCKGTEATRGSFTPEARSGWV*QDQNRN
Trigger: ATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCG...GGCCTCTGGGGTGAAGCTGCCTCTTGTTGCTTCGGTGCCTTTACACTGTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR TCA 90 bp CAAGGTCTGAGTGTCCAGCCTAAAGTGCTTGGAGAGGGCACCAAGGTGAACCGAGGCGCCCTCGGAGTGTaGCTTACCGTAACTGTCATA +
Preference number: 2 (lower is better)
Translates to: QGLSVQPKVLGEGTKVNRGALGV*LTVTVI
Trigger: TATGACAGTTACGGTAAGTCACACTCCGAGGGCGCC...TCGGTTCACCTTGGTGCCCTCTCCAAGCACTTTAGGCTGGACACTCAGACCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR TCA 90 bp AGCAGGCACAGTGTAAAGGCACCGAAGCAACAAGAGGCAGCTTCACCCCAGAGGCACAGTGACAAGGTCTaGGTGTCCAGCCTAAAGTGC +
Preference number: 2 (lower is better)
Translates to: SRHSVKAPKQQEAASPQRHSDKV*VSSLKC
Trigger: GCACTTTAGGCTGGACACTCAGACCTTGTCACTGTG...CCTCTGGGGTGAAGCTGCCTCTTGTTGCTTCGGTGCCTTTACACTGTGCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR TCA 90 bp GCACAGTGTAAAGGCACCGAAGCAACAAGAGGCAGCTTCACCCCAGAGGCCAGACACAGTGACAAGGTCTaGGTGTCCAGCCTAAAGTGC +
Preference number: 2 (lower is better)
Translates to: AQCKGTEATRGSFTPEARHSDKV*VSSLKC
Trigger: GCACTTTAGGCTGGACACTCAGACCTTGTCACTGTG...TCTGGCCTCTGGGGTGAAGCTGCCTCTTGTTGCTTCGGTGCCTTTACACTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR TCA 90 bp AGGACGATCTTGAGCAGGAAGGGTTTTTACTCGTTGTGTGTAGCTGAGGACAAGACACATGCACCTAGCTaGCTGCCCAGCGGGCCCTCG +
Preference number: 2 (lower is better)
Translates to: RTILSRKGFYSLCVAEDKTHAPS*LPSGPS
Trigger: CGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGT...CTTGTCCTCAGCTACACACAACGAGTAAAAACCCTTCCTGCTCAAGATCGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR TCA 90 bp AACCTGCCAAAGCAAAGCAGCGTTACTCCCAACGTCCTCCACAGGGCTCACAGCCTCGTTGTGTGTAGCTaGGGACAAGAAGCAGGCACA +
Preference number: 2 (lower is better)
Translates to: NLPKQSSVTPNVLHRAHSLVVCS*GQEAGT
Trigger: TGTGCCTGCTTCTTGTCCTCAGCTACACACAACGAG...GCTGTGAGCCCTGTGGAGGACGTTGGGAGTAACGCTGCTTTGCTTTGGCAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp TTCCTCAGCCACTGCAAATACAACATCGATGGAGTATGCGTACGTCTTCCAGTACTCCAGGGCAGTTGCTaGCACACCCGCCGGGGTCCT +
Preference number: 2 (lower is better)
Translates to: FLSHCKYNIDGVCVRLPVLQGSC*HTRRGP
Trigger: AGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAG...TACTGGAAGACGTACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp TGGGAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACCTCCAGGGCAGTTGCTaGCACACCCGCCGGGGTCCT +
Preference number: 2 (lower is better)
Translates to: WEYKEVHLLHINVQRSSHLQGSC*HTRRGP
Trigger: AGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAG...GTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp TCAGCTTCCGACAAAGAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTCCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGC +
Preference number: 2 (lower is better)
Translates to: SASDKERIHSPFDLREVSPLRDV*TSTVGR
Trigger: GCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG...ACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTCTTTGTCGGAAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp CATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTTCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 2 (lower is better)
Translates to: HLAFASCDRNGSERTDAPSWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...AGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp AACCTGCCAAAGCAAAGCAGCGTTACTCCCAACGTCCTCCACAGGGCTCACAGCCTCAGAGGGTTCTGTTaGGCGCACAACACTTCTGTC +
Preference number: 2 (lower is better)
Translates to: NLPKQSSVTPNVLHRAHSLRGFC*AHNTSV
Trigger: GACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAG...GCTGTGAGCCCTGTGGAGGACGTTGGGAGTAACGCTGCTTTGCTTTGGCAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR CCA 90 bp CACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCCAGATGCGCCTCTTCTaGGCAAGCACAGTGACAAGG +
Preference number: 2 (lower is better)
Translates to: HVALYSNPTFTGLHIVVGQMRLF*ASTVTR
Trigger: CCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTG...GCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp TTGAGCAGGAAGGGTTTTTACTCGTTGTGTGTAGCTGAGGACAAGAAGCAGGCAACAGCCGAGGGAGGCTaGCCTGCGGCCACACATGCA +
Preference number: 2 (lower is better)
Translates to: LSRKGFYSLCVAEDKKQATAEGG*PAATHA
Trigger: TGCATGTGTGGCCGCAGGCCAGCCTCCCTCGGCTGT...TGCCTGCTTCTTGTCCTCAGCTACACACAACGAGTAAAAACCCTTCCTGCTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR CCA 90 bp CAGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 2 (lower is better)
Translates to: QSHLAFASCDRNGSERTDRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...ATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591097.5
3UTR-3UTR CCA 90 bp TCCCTTGCCTTTTTGGTCAGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGACCCGGGACGGAAGCTaGCCATCCCGCAACCACCCC +
Preference number: 2 (lower is better)
Translates to: SLAFLVSLIWLLRPAIEMTRDGS*PSRNHP
Trigger: GGGGTGGTTGCGGGATGGCCAGCTTCCGTCCCGGGT...CATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAAAAGGCAAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR-3UTR TCA 90 bp GAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTCATCGATCTCAGAGAAGTaGGTGGGGCACCCACTTCAT +
Preference number: 2 (lower is better)
Translates to: ERIHSPFDLREVSGAPTSSISEK*VGHPLH
Trigger: ATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGA...TGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp AGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTCATGGGGCCAACCCTTGGCTTTTGCGTCCTaGGATAGAAATGGCTCTGAG +
Preference number: 2 (lower is better)
Translates to: SPFDLREVSGAPTSWGQPLAFAS*DRNGSE
Trigger: CTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAA...GGGTTGGCCCCATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp CCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGACGCATCTCCCTTGCCTTTTTaGTCAGTCTCATTTGGCTTT +
Preference number: 2 (lower is better)
Translates to: PLRDVCTSTVGRTAQMDASPLPF*SVSFGF
Trigger: AAAGCCAAATGAGACTGACCAAAAAGGCAAGGGAGA...TGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp CCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACTCTCCCTTGCCTTTTTaGTCAGTCTCATTTGGCTTT +
Preference number: 2 (lower is better)
Translates to: PGQLLPHPPGSYHTTLRNSPLPF*SVSFGF
Trigger: AAAGCCAAATGAGACTGACCAAAAAGGCAAGGGAGA...GTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp AGGCCCTCCCGCTTCTGCGAATGTCCTGAGCAGTCTCCTCTCCTCTTGGCCTGGTCTCCCTTGCCTTTTTaGTCAGTCTCATTTGGCTTT +
Preference number: 2 (lower is better)
Translates to: RPSRFCECPEQSPLLLAWSPLPF*SVSFGF
Trigger: AAAGCCAAATGAGACTGACCAAAAAGGCAAGGGAGA...CCAGGCCAAGAGGAGAGGAGACTGCTCAGGACATTCGCAGAAGCGGGAGGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR-3UTR TCA 90 bp GTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGGGCTATTTCCACATATaGGCTAGCCAAGGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: VHTWPFIRIRLSQGSTSLGYFHI*ASQGSS
Trigger: GCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGCC...CAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000444172.6
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp TTCTGGGTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACAGGCTATTTCCACATATaGGCTAGCCAAGGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: FWVHTWPFIRIRLSQGSTGYFHI*ASQGSS
Trigger: GCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGCC...TGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCACCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp CCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 2 (lower is better)
Translates to: PLFESDFHRAPHRCGQGLSSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...CAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR TCA 90 bp TTTTTGGTCAGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGAGAGGGCACCAAGGTaGACCGAGCTCCCACCGCAG +
Preference number: 2 (lower is better)
Translates to: FLVSLIWLLRPAIEMALRERAPR*TELPPQ
Trigger: CTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTCTC...TCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR TCA 90 bp TTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTCTTTCTGGGCAAGCACAGTaGCAAGGTCTGAGTGTCCAG +
Preference number: 2 (lower is better)
Translates to: LAFASCDRNGSERTDAPLSGQAQ*QGLSVQ
Trigger: CTGGACACTCAGACCTTGTCACTGTGCTTGCCCAGA...AAGAGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR GCA 90 bp CTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGTATGCGTCCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGC +
Preference number: 2 (lower is better)
Translates to: LRTRIPQPLQIQHRWSMRPLRDV*TSTVGR
Trigger: GCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG...ACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp CCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTCTTCTGGGCAAGCACATGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 2 (lower is better)
Translates to: PAIEMALRGQMRLFWASTWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...TGTGCTTGCCCAGAAGAGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
3UTR-3UTR CCA 90 bp CACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGCTCAGAGGGTTCTGTTaGGCGCACAACACTTCTGTC +
Preference number: 2 (lower is better)
Translates to: HTWPFIRIRLSQGSTSLWLRGFC*AHNTSV
Trigger: GACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAG...CCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000444172.6
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR CCA 90 bp CAACAAGGACCCCAGCAGGGCAGCATCTTGGAAATTGTTCAAAATCTCCACCAGGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 2 (lower is better)
Translates to: QQGPQQGSILEIVQNLHQDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...CTGGTGGAGATTTTGAACAATTTCCAAGATGCTGCCCTGCTGGGGTCCTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR-3UTR GCA 90 bp AGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTGGGAATACAAGGAGGTaGATTTACTACACATTAACG +
Preference number: 2 (lower is better)
Translates to: RAVAATPAGVLPHYTQKRGNTRR*IYYTLT
Trigger: CGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC...ACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp TCTTTTAATCGGCTTCGTAAAGCCAAAGAAAACTGCGTACAAGAATTCCTCAGCCTCCAGGGCAGTTGCTaGCACACCCGCCGGGGTCCT +
Preference number: 2 (lower is better)
Translates to: SFNRLRKAKENCVQEFLSLQGSC*HTRRGP
Trigger: AGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAG...GCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAGCCGATTAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp CATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTGCCCTCGCTCTCCCTTaGCTTTTTGGTCAGTCTCAT +
Preference number: 2 (lower is better)
Translates to: HLAFASCDRNGSERTDAPALALP*LFGQSH
Trigger: ATGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGC...AGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR GCA 90 bp GAGCCCGCAGCAAGGAGTGTGTGGTGCAATGCAAGGGAATTGTCAGAGCAAGGTGAGTGTGTGGTGCAATaGAAGGGAATTGTCAGAGCA +
Preference number: 2 (lower is better)
Translates to: EPAARSVWCNARELSEQGECVVQ*KGIVRA
Trigger: TGCTCTGACAATTCCCTTGCATTGCACCACACACTC...ACCTTGCTCTGACAATTCCCTTGCATTGCACCACACACTCCTTGCTGCGGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR CCA 90 bp GGACAGATGCGCCTCTTCTGGGCAAGCACAGTGACAAGGTCTGAGTGTCCAGCCTCTCCCTTGCCTTTTTaGTCAGTCTCATTTGGCTTT +
Preference number: 2 (lower is better)
Translates to: GQMRLFWASTVTRSECPASPLPF*SVSFGF
Trigger: AAAGCCAAATGAGACTGACCAAAAAGGCAAGGGAGA...GGCTGGACACTCAGACCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR TCA 90 bp TCAGCTTCCGACAAAGAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTTCGATCTCAGAGAAGTaGGTGGGGCACCCACTTCAT +
Preference number: 2 (lower is better)
Translates to: SASDKERIHSPFDLREVSSISEK*VGHPLH
Trigger: ATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGA...ACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTCTTTGTCGGAAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR TCA 90 bp CGTAAAGCCAAAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACTCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 2 (lower is better)
Translates to: RKAKENCVQEFLSHCKYNSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...GTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR TCA 90 bp ACACACAGCCATTGGAAGGACGATCTTGAGCAGGAAGGGTTTTTACTCGTTGTGGGCGCCCTCGGAGTGTaGCTTACCGTAACTGTCATA +
Preference number: 2 (lower is better)
Translates to: THSHWKDDLEQEGFLLVVGALGV*LTVTVI
Trigger: TATGACAGTTACGGTAAGTCACACTCCGAGGGCGCC...CACAACGAGTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAATGGCTGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR GCA 90 bp TACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTCCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGC +
Preference number: 2 (lower is better)
Translates to: YKEVHLLHINVQRSSHNLPLRDV*TSTVGR
Trigger: GCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG...AAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp CAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGAACATCGATGGAGTATaGGTACGTCTTCCAGTAAAA +
Preference number: 2 (lower is better)
Translates to: QEPLRDVCTSTVGRTAQMNIDGV*VRLPVK
Trigger: TTTTACTGGAAGACGTACGCATACTCCATCGATGTT...CATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp CAGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATCAGATGCGCCTCTTCTaGGCAAGCACAGTGACAAGG +
Preference number: 2 (lower is better)
Translates to: QSHLAFASCDRNGSERTDQMRLF*ASTVTR
Trigger: CCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTG...ATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR CCA 90 bp GCACAGTGTAAAGGCACCGAAGCAACAAGAGGCAGCTTCACCCCAGAGGCCAGATCTCCCTTGCCTTTTTaGTCAGTCTCATTTGGCTTT +
Preference number: 2 (lower is better)
Translates to: AQCKGTEATRGSFTPEARSPLPF*SVSFGF
Trigger: AAAGCCAAATGAGACTGACCAAAAAGGCAAGGGAGA...TCTGGCCTCTGGGGTGAAGCTGCCTCTTGTTGCTTCGGTGCCTTTACACTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR CAA 90 bp ACAGCCATTGGAAGGACGATCTTGAGCAGGAAGGGTTTTTACTCGTaGTGTGTAGCTGAGGACAAGAAGCAGGCACAGTGTAAAGGCACC +
Preference number: 2 (lower is better)
Translates to: TAIGRTILSRKGFYS*CVAEDKKQAQCKGT
Trigger: GGTGCCTTTACACTGTGCCTGCTTCTTGTCCTCAGCTACACACAACGAGTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAATGGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR GCA 90 bp AACGAGGCCATCCCGGCGTCAGAAGCGGTCAGGCTGGGTTTGACAAGATCAGAAGGGAATACAAGGAGGTaGATTTACTACACATTAACG +
Preference number: 2 (lower is better)
Translates to: NEAIPASEAVRLGLTRSEGNTRR*IYYTLT
Trigger: CGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC...TTCTGATCTTGTCAAACCCAGCCTGACCGCTTCTGACGCCGGGATGGCCTCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
3UTR-3UTR GCA 90 bp ACACGGTCTTTTAATCGGCTTCGTAAAGCCAAAGAAAACTGCGTACAAGAATTCCCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGC +
Preference number: 2 (lower is better)
Translates to: TRSFNRLRKAKENCVQEFPLRDV*TSTVGR
Trigger: GCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG...GAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAGCCGATTAAAAGACCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp ATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACAACATCGATGGAGTATaGGTACGTCTTCCAGTAAAA +
Preference number: 2 (lower is better)
Translates to: IFKNLSGTSARLLWGAQHNIDGV*VRLPVK
Trigger: TTTTACTGGAAGACGTACGCATACTCCATCGATGTT...GTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp CCTCAGCCACTGCAAATACAACATCGATGGAGTATGCGTACGTCTTCCAGTAAAGTGTCCAGCCTAAAGTaGTTGGAGAGGGCACCAAGG +
Preference number: 2 (lower is better)
Translates to: PQPLQIQHRWSMRTSSSKVSSLK*LERAPR
Trigger: CCTTGGTGCCCTCTCCAAGCACTTTAGGCTGGACAC...TTTACTGGAAGACGTACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp TCCCTTGCCTTTTTGGTCAGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGCAGATGCGCCTCTTCTaGGCAAGCACAGTGACAAGG +
Preference number: 2 (lower is better)
Translates to: SLAFLVSLIWLLRPAIEMQMRLF*ASTVTR
Trigger: CCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTG...CATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAAAAGGCAAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR CCA 90 bp TTTTTGGTCAGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 2 (lower is better)
Translates to: FLVSLIWLLRPAIEMALRDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...TCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
3UTR-3UTR TCA 90 bp ACACGAGCGGAAGGAGTTACCTCGAATTACAGGGCTATTTCCACATATGAGCTATCGATCTCAGAGAAGTaGGTGGGGCACCCACTTCAT +
Preference number: 2 (lower is better)
Translates to: TRAEGVTSNYRAISTYELSISEK*VGHPLH
Trigger: ATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGA...TAGCTCATATGTGGAAATAGCCCTGTAATTCGAGGTAACTCCTTCCGCTCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR TCA 90 bp TTTTTGGTCAGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGCGCCCTCGGAGTGTaGCTTACCGTAACTGTCATA +
Preference number: 2 (lower is better)
Translates to: FLVSLIWLLRPAIEMALRGALGV*LTVTVI
Trigger: TATGACAGTTACGGTAAGTCACACTCCGAGGGCGCC...TCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR TCA 90 bp ATCTTGAGCAGGAAGGGTTTTTACTCGTTGTGTGTAGCTGAGGACAAGAAGCAGCTCGTTGTGTGTAGCTaGGGACAAGAAGCAGGCACA +
Preference number: 2 (lower is better)
Translates to: ILSRKGFYSLCVAEDKKQLVVCS*GQEAGT
Trigger: TGTGCCTGCTTCTTGTCCTCAGCTACACACAACGAG...CTGCTTCTTGTCCTCAGCTACACACAACGAGTAAAAACCCTTCCTGCTCAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR GCA 90 bp GAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTCAGGGAATACAAGGAGGTaGATTTACTACACATTAACG +
Preference number: 2 (lower is better)
Translates to: ERIHSPFDLREVSGAPTSGNTRR*IYYTLT
Trigger: CGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC...TGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp AAAGAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTGAATTCCTCAGCCACTaGAAATACAACATCGATGGA +
Preference number: 2 (lower is better)
Translates to: KERIHSPFDLREVSGAPTEFLSH*KYNIDG
Trigger: TCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTC...AGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp CTGGGTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCAAAGCCAAAGAAAACTaGGTACAAGAATTCCTCAGC +
Preference number: 2 (lower is better)
Translates to: LGAHVALYSNPTFTGLHIKAKEN*VQEFLS
Trigger: GCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTT...GATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR GCA 90 bp TACTCGTTGTGTGTAGCTGAGGACAAGAAGCAGGCACAGTGTAAAGGCACCGAATTGGCTTTTGCGTCCTaGGATAGAAATGGCTCTGAG +
Preference number: 2 (lower is better)
Translates to: YSLCVAEDKKQAQCKGTELAFAS*DRNGSE
Trigger: CTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAA...TTCGGTGCCTTTACACTGTGCCTGCTTCTTGTCCTCAGCTACACACAACGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR GCA 90 bp AGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGTGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 2 (lower is better)
Translates to: SLIWLLRPAIEMALRGQMWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...CATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
3UTR-3UTR GCA 90 bp TTTTTGGTCAGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGA +
Preference number: 2 (lower is better)
Translates to: FLVSLIWLLRPAIEMALRGCLTT*LPGLLG
Trigger: TCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACC...TCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
3UTR-3UTR CCA 90 bp GAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATTCTGCACGTCTACTGTaGGGCGCACAGCACAGATGG +
Preference number: 2 (lower is better)
Translates to: EYKEVHLLHINVQRSSHNSARLL*GAQHRW
Trigger: CCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGA...ATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp AAGGGAATTGTCAGAGCAAGGTTCATTTCACACGGTCTTTTAATCGGCTTCGTATCTGCACGTCTACTGTaGGGCGCACAGCACAGATGG +
Preference number: 2 (lower is better)
Translates to: KGIVRARFISHGLLIGFVSARLL*GAQHRW
Trigger: CCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGA...TACGAAGCCGATTAAAAGACCGTGTGAAATGAACCTTGCTCTGACAATTCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR CCA 90 bp CATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTTTGGTCAGTCTCATTTaGCTTTTGCGTCCTGCGATA +
Preference number: 2 (lower is better)
Translates to: HLAFASCDRNGSERTDAPLVSLI*LLRPAI
Trigger: TATCGCAGGACGCAAAAGCCAAATGAGACTGACCAA...AGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR TCA 90 bp GGGTTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTCACAGTGACAAGGTCTaGGTGTCCAGCCTAAAGTGC +
Preference number: 2 (lower is better)
Translates to: GFDKIRTEMTTKVGIQGGHSDKV*VSSLKC
Trigger: GCACTTTAGGCTGGACACTCAGACCTTGTCACTGTG...ACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR GCA 90 bp GAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATGTGTCCAGCCTAAAGTaGTTGGAGAGGGCACCAAGG +
Preference number: 2 (lower is better)
Translates to: EYKEVHLLHINVQRSSHNVSSLK*LERAPR
Trigger: CCTTGGTGCCCTCTCCAAGCACTTTAGGCTGGACAC...ATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR GCA 90 bp CAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACACAGTGTCCAGCCTAAAGTaGTTGGAGAGGGCACCAAGG +
Preference number: 2 (lower is better)
Translates to: QNRNDYESGNTRRCIYYTVSSLK*LERAPR
Trigger: CCTTGGTGCCCTCTCCAAGCACTTTAGGCTGGACAC...TGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR CCA 90 bp AAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGTATTCTGCACGTCTACTGTaGGGCGCACAGCACAGATGG +
Preference number: 2 (lower is better)
Translates to: KTAYKNSSATANTTSMEYSARLL*GAQHRW
Trigger: CCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGA...ATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp GGTCTTTTAATCGGCTTCGTAAAGCCAAAGAAAACTGCGTACAAGAATTCCTCATCTGCACGTCTACTGTaGGGCGCACAGCACAGATGG +
Preference number: 2 (lower is better)
Translates to: GLLIGFVKPKKTAYKNSSSARLL*GAQHRW
Trigger: CCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGA...TGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAGCCGATTAAAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR TCA 90 bp CGGTCTTTTAATCGGCTTCGTAAAGCCAAAGAAAACTGCGTACAAGAATTCCTCTCGATCTCAGAGAAGTaGGTGGGGCACCCACTTCAT +
Preference number: 2 (lower is better)
Translates to: RSFNRLRKAKENCVQEFLSISEK*VGHPLH
Trigger: ATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGA...GAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAGCCGATTAAAAGACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR TCA 90 bp GATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACTCGATCTCAGAGAAGTaGGTGGGGCACCCACTTCAT +
Preference number: 2 (lower is better)
Translates to: DQNRNDYESGNTRRCIYYSISEK*VGHPLH
Trigger: ATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGA...GTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp TACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTGCCCTCGCTCTCCCTTaGCTTTTTGGTCAGTCTCAT +
Preference number: 2 (lower is better)
Translates to: YKEVHLLHINVQRSSHNLALALP*LFGQSH
Trigger: ATGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGC...AAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR TCA 90 bp GATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCATTTACTACCGGTCAGGCTGGGTTTaGCAAGATCAGAACCGAAAT +
Preference number: 2 (lower is better)
Translates to: DQNRNDYESGNTRRCIYYRSGWV*QDQNRN
Trigger: ATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCG...GTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
3UTR-3UTR TCA 90 bp CGTAAAGCCAAAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACCGGTCAGGCTGGGTTTaGCAAGATCAGAACCGAAAT +
Preference number: 2 (lower is better)
Translates to: RKAKENCVQEFLSHCKYNRSGWV*QDQNRN
Trigger: ATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCG...GTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR TCA 90 bp ATAAATAAACATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGAGATCAGAACCGAAATaGCTACGAAAGTGGGAATAC +
Preference number: 2 (lower is better)
Translates to: INKHLQEPLRDVCTSTVGRSEPK*LRKWEY
Trigger: GTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCT...CCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR TCA 90 bp AAAAAGGACAATATAAATAAACATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCGATCTCAGAGAAGTaGGTGGGGCACCCACTTCAT +
Preference number: 2 (lower is better)
Translates to: KKDNINKHLQEPLRDVCTSISEK*VGHPLH
Trigger: ATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGA...CGTGCAGACGTCCCTGAGAGGTTCTTGAAGATGTTTATTTATATTGTCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp GAGTGTGTGGTGCAATGCAAGGGAATTGTCAGAGCAAGGTTCATTTCACACGGTGGGAATACAAGGAGGTaGATTTACTACACATTAACG +
Preference number: 2 (lower is better)
Translates to: ECVVQCKGIVRARFISHGGNTRR*IYYTLT
Trigger: CGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC...ACCGTGTGAAATGAACCTTGCTCTGACAATTCCCTTGCATTGCACCACACACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR GCA 90 bp CTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGTATGCGTGAATTCCTCAGCCACTaGAAATACAACATCGATGGA +
Preference number: 2 (lower is better)
Translates to: LRTRIPQPLQIQHRWSMREFLSH*KYNIDG
Trigger: TCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTC...ACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp CTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGTATGCGTCAAATACAACATCGATaGAGTATGCGTACGTCTTCC +
Preference number: 2 (lower is better)
Translates to: LRTRIPQPLQIQHRWSMRQIQHR*SMRTSS
Trigger: GGAAGACGTACGCATACTCCATCGATGTTGTATTTG...ACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR GCA 90 bp CAAGGAGTGTGTGGTGCAATGCAAGGGAATTGTCAGAGCAAGGTTCATTTCACAAAAGCCAAAGAAAACTaGGTACAAGAATTCCTCAGC +
Preference number: 2 (lower is better)
Translates to: QGVCGAMQGNCQSKVHFTKAKEN*VQEFLS
Trigger: GCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTT...TGTGAAATGAACCTTGCTCTGACAATTCCCTTGCATTGCACCACACACTCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR GCA 90 bp AAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGTATTTGGCTTTTGCGTCCTaGGATAGAAATGGCTCTGAG +
Preference number: 2 (lower is better)
Translates to: KTAYKNSSATANTTSMEYLAFAS*DRNGSE
Trigger: CTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAA...ATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR TCA 90 bp TTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCAAGATCAGAACCGAAATaGCTACGAAAGTGGGAATAC +
Preference number: 2 (lower is better)
Translates to: FDKIRTEMTTKVGIQGGARSEPK*LRKWEY
Trigger: GTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCT...TGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
3UTR-3UTR GCA 90 bp TTTTTGGTCAGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGGAATACAAGGAGGTaGATTTACTACACATTAACG +
Preference number: 2 (lower is better)
Translates to: FLVSLIWLLRPAIEMALRGNTRR*IYYTLT
Trigger: CGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC...TCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR GCA 90 bp CTTCGTAAAGCCAAAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACGAATTCCTCAGCCACTaGAAATACAACATCGATGGA +
Preference number: 2 (lower is better)
Translates to: LRKAKENCVQEFLSHCKYEFLSH*KYNIDG
Trigger: TCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTC...GTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp GAATACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCAAATACAACATCGATaGAGTATGCGTACGTCTTCC +
Preference number: 2 (lower is better)
Translates to: EYKEVHLLHINVQRSSHNQIQHR*SMRTSS
Trigger: GGAAGACGTACGCATACTCCATCGATGTTGTATTTG...ATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR CCA 90 bp AAAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGACAAATACAACATCGATaGAGTATGCGTACGTCTTCC +
Preference number: 2 (lower is better)
Translates to: KENCVQEFLSHCKYNIDGQIQHR*SMRTSS
Trigger: GGAAGACGTACGCATACTCCATCGATGTTGTATTTG...TCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR GCA 72 bp AGGCGGGGGACCCGGCGCTCCCGGGAGGCGCTGCCCTaGACCCAACACACACCGAAAGGCGCCCGCCATGGG +
Preference number: 3 (lower is better)
Translates to: RRGTRRSREALP*TQHTPKGARHG
Trigger: CCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGCGCCGGGTCCCCCGCCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
3UTR CCA 72 bp CAGCTCCCCCAGGGACCTGGGACCCGGGACGGAAGCTaGCCATCCCGCAACCACCCCTGTGCTTGGGCCGGC +
Preference number: 3 (lower is better)
Translates to: QLPQGPGTRDGS*PSRNHPCAWAG
Trigger: GCCGGCCCAAGCACAGGGGTGGTTGCGGGATGGCCAGCTTCCGTCCCGGGTCCCAGGTCCCTGGGGGAGCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR-3UTR CAA 90 bp CAGGCCAGCATGCCCAGGGCGGGTCTGCACCTTGGCGCAGCTGGAGCCAGCTACGGGGCTCCAGGGCAGTaGCTGCCACACCCGCCGGGG +
Preference number: 3 (lower is better)
Translates to: QASMPRAGLHLGAAGASYGAPGQ*LPHPPG
Trigger: CCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCC...GTAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCATGCTGGCCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR TCA 72 bp CACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGA +
Preference number: 3 (lower is better)
Translates to: HRSPCSRRDSRP*ARTSLAKRLRG
Trigger: TCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR CAA 90 bp GGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCTGCCTCCAGCTCTaGTTCCAGGTGAAGTCCCTC +
Preference number: 3 (lower is better)
Translates to: GRPVSCRRTAARAPGETRGCLQL*FQVKSL
Trigger: GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCC...TCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR TCA 72 bp CACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCGAAGCGCCTCCTGGAA +
Preference number: 3 (lower is better)
Translates to: HRSPCSRRDSRP*ARTSLAKRLLE
Trigger: TTCCAGGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
3UTR TCA 72 bp CACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCGAAGCGCAGGGGACAA +
Preference number: 3 (lower is better)
Translates to: HRSPCSRRDSRP*ARTSLAKRRGQ
Trigger: TTGTCCCCTGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585913.5
3UTR-3UTR CAA 90 bp AGCTTCACCCCAGAGGCCAGACCAGGGCGCGGCCTGCGGCCGGGGAGCAACCACGGCCCTCGCTCTCCCTaGCCTTTTTGGTCAGTCTCA +
Preference number: 3 (lower is better)
Translates to: SFTPEARPGRGLRPGSNHGPRSP*PFWSVS
Trigger: TGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGCC...GTGGTTGCTCCCCGGCCGCAGGCCGCGCCCTGGTCTGGCCTCTGGGGTGAAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR TCA 72 bp CACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCGAAGCGCCTCTTACAG +
Preference number: 3 (lower is better)
Translates to: HRSPCSRRDSRP*ARTSLAKRLLQ
Trigger: CTGTAAGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585914.5
3UTR GCA 72 bp ACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTaGCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACT +
Preference number: 3 (lower is better)
Translates to: TSLWARTGRPVS*RRTAARAPGET
Trigger: AGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR GCA 72 bp AGGCTCCGTCACAGGCCAGCATGCCCAGGGCGGGTCTaGACCTTGGCGCAGCTGGAGCCAGCTACCCGTATG +
Preference number: 3 (lower is better)
Translates to: RLRHRPACPGRV*TLAQLEPATRM
Trigger: CATACGGGTAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCATGCTGGCCTGTGACGGAGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CCA 72 bp CCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTaGCGAAGCGCCTCAGGGGACAAGCCTCCTGGGCAA +
Preference number: 3 (lower is better)
Translates to: PGETRGPEPAPH*RSASGDKPPGQ
Trigger: TTGCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR CCA 72 bp ACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTaGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCG +
Preference number: 3 (lower is better)
Translates to: TFTGLHIVVGKD*PPRKLPAHRSP
Trigger: CGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR CCA 72 bp CCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTaGCGAAGCGCCTCCTGGAAGGAGGAGGAAGGGAGG +
Preference number: 3 (lower is better)
Translates to: PGETRGPEPAPH*RSASWKEEEGR
Trigger: CCTCCCTTCCTCCTCCTTCCAGGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
3UTR-3UTR CAA 90 bp GCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACGCGGTCAGGCTGGGTTaGACAAGATCAGAACCGAAA +
Preference number: 3 (lower is better)
Translates to: AGAPQPVLQERLEALSPHAVRLG*TRSEPK
Trigger: TTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGC...GTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR GCA 72 bp GAGGCTGGCCTGCGGCCACACATGCACCTAGCTGACTaGCCAGCGGGCCCTCGCTCTCCCTTGCCTTTTTGG +
Preference number: 3 (lower is better)
Translates to: EAGLRPHMHLAD*PAGPRSPLPFW
Trigger: CCAAAAAGGCAAGGGAGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGTGGCCGCAGGCCAGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR GCA 72 bp GCCCAGGTGCCGCCCGGGACAGGGCTCAGCGCCACATaGCACTCTTCCCGAAAGCACTTACAGGGGACAAGC +
Preference number: 3 (lower is better)
Translates to: AQVPPGTGLSAT*HSSRKHLQGTS
Trigger: GCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGCGCTGAGCCCTGTCCCGGGCGGCACCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
3UTR CCA 72 bp GTCACAGGCCAGCATGCCCAGGGCGGGTCTGCACCTTaGCGCAGCTGGAGCCAGCTACCCGTATGGGATGGA +
Preference number: 3 (lower is better)
Translates to: VTGQHAQGGSAP*RSWSQLPVWDG
Trigger: TCCATCCCATACGGGTAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCATGCTGGCCTGTGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CCA 72 bp CCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTaGCGAAGCGCCTCTTACAGGGGACAAGCCTCCTGG +
Preference number: 3 (lower is better)
Translates to: PGETRGPEPAPH*RSASYRGQASW
Trigger: CCAGGAGGCTTGTCCCCTGTAAGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585914.5
3UTR CCA 72 bp CGCACCTCACTGGCGAAGCGCAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTG +
Preference number: 3 (lower is better)
Translates to: RTSLAKRRGQAS*ASGCLQLLFQV
Trigger: CACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGCGCTTCGCCAGTGAGGTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585913.5
3UTR-3UTR CAA 90 bp CACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGAGTTGGAAAGGGGCTCCAGGGCAGTaGCTGCCACACCCGCCGGGG +
Preference number: 3 (lower is better)
Translates to: HPPGSYHTTLRNVTRSWKGAPGQ*LPHPPG
Trigger: CCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCC...TTTCCAACTCCGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR GCA 72 bp TCAGCGTCAGGTGCACGTCCACTGTCCCTGCTAAGCTaGCCGCACAGTCCAGCCCTCTGGCCACCACTGCCA +
Preference number: 3 (lower is better)
Translates to: SASGARPLSLLS*PHSPALWPPLP
Trigger: TGGCAGTGGTGGCCAGAGGGCTGGACTGTGCGGGCAGCTTAGCAGGGACAGTGGACGTGCACCTGACGCTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR GCA 72 bp ACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTaGGGGAGAGCAGGACTCACTGAAACGCCCAGGTGC +
Preference number: 3 (lower is better)
Translates to: THTERRPPWGHR*GRAGLTETPRC
Trigger: GCACCTGGGCGTTTCAGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
3UTR CCA 72 bp ACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTG +
Preference number: 3 (lower is better)
Translates to: TSLAKRLRGQAS*ASGCLQLLFQV
Trigger: CACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR CCA 72 bp CAGCATGCCCAGGGCGGGTCTGCACCTTGGCGCAGCTaGAGCCAGCTACCCGTATGGGATGGAGCTATGTGG +
Preference number: 3 (lower is better)
Translates to: QHAQGGSAPWRS*SQLPVWDGAMW
Trigger: CCACATAGCTCCATCCCATACGGGTAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCATGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CCA 72 bp GTCATCGCTGCTCTCAGGCCACCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCTGCCAAAGCAAAGCAGC +
Preference number: 3 (lower is better)
Translates to: VIAALRPPFPES*PGPFNLPKQSS
Trigger: GCTGCTTTGCTTTGGCAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGGTGGCCTGAGAGCAGCGATGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CCA 72 bp TGGGCCGGCCTCCCCCTCACCTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCACTCCTGGACTCGAACC +
Preference number: 3 (lower is better)
Translates to: WAGLPLTCYSSL*SLRSPHSWTRT
Trigger: GGTTCGAGTCCAGGAGTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCAGGTGAGGGGGAGGCCGGCCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR CCA 72 bp GACGGAAGCTGGCCATCCCGCAACCACCCCTGTGCTTaGGCCGGCCTCCCCCTCACCTGCTATAGTAGTCTC +
Preference number: 3 (lower is better)
Translates to: DGSWPSRNHPCA*AGLPLTCYSSL
Trigger: GAGACTACTATAGCAGGTGAGGGGGAGGCCGGCCCAAGCACAGGGGTGGTTGCGGGATGGCCAGCTTCCGTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR CCA 72 bp GCCCTGCACCCAACACACACCGAAAGGCGCCCGCCATaGGGCCATAGGTGCGGGAGAGCAGGACTCACTGAA +
Preference number: 3 (lower is better)
Translates to: ALHPTHTERRPP*GHRCGRAGLTE
Trigger: TTCAGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
3UTR-3UTR CAA 90 bp GGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTCCTGGGTCTCAGAGGGTTCTGTaGGGCGCACAACACTTCTGT +
Preference number: 3 (lower is better)
Translates to: GPEPAPHWRSASGDKPPGSQRVL*GAQHFC
Trigger: ACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGA...CCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000444172.6
ENST00000587169.5
ENST00000590347.5
3UTR TCA 72 bp GTGTCCAGCCTAAAGTGCTTGGAGAGGGCACCAAGGTaGACCGAGCTCCCACCGCAGGCCACAGCAGCGTGG +
Preference number: 3 (lower is better)
Translates to: VSSLKCLERAPR*TELPPQATAAW
Trigger: CCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTCTCCAAGCACTTTAGGCTGGACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR TCA 72 bp GGCAGAGCCACCACGGTACCCACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTCTACTCGGATCTGCCG +
Preference number: 3 (lower is better)
Translates to: GRATTVPTGSVV*RLACLVYSDLP
Trigger: CGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTACCGTGGTGGCTCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
3UTR TCA 72 bp AAGGTACCCGTCTACTTCTGCTCTGCCACAACAGGCTaGGCCGCCAGCCCCCATGCCAGCCGTCCCTTCTGG +
Preference number: 3 (lower is better)
Translates to: KVPVYFCSATTG*AASPHASRPFW
Trigger: CCAGAAGGGACGGCTGGCATGGGGGCTGGCGGCTCAGCCTGTTGTGGCAGAGCAGAAGTAGACGGGTACCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR GCA 72 bp CACCCTTCCCCGAGTCCTGGCCGGGCCCCTTCAACCTaGCAAAGCAAAGCAGCGTTACTCCCAACGTCCTCC +
Preference number: 3 (lower is better)
Translates to: HPSPSPGRAPST*QSKAALLPTSS
Trigger: GGAGGACGTTGGGAGTAACGCTGCTTTGCTTTGGCAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR GCA 72 bp GAGCAGTCTCCTCTCCTCTTGGCCTGGGTCCCCACCTaGCTCTGCTCCTTGCCCAGCCAGTCTCATCTCAGC +
Preference number: 3 (lower is better)
Translates to: EQSPLLLAWVPT*LCSLPSQSHLS
Trigger: GCTGAGATGAGACTGGCTGGGCAAGGAGCAGAGGCAGGTGGGGACCCAGGCCAAGAGGAGAGGAGACTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR CCA 72 bp CACTGGCGAAGCGCCTCTTACAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTG +
Preference number: 3 (lower is better)
Translates to: HWRSASYRGQAS*ASGCLQLLFQV
Trigger: CACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGAGGCGCTTCGCCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585914.5
3UTR-3UTR CAA 90 bp ACCGAAGCAACAAGAGGCAGCTTCACCCCAGAGGCCAGACCAGGGCGCGGCCTGGGCCCTCGCTCTCCCTaGCCTTTTTGGTCAGTCTCA +
Preference number: 3 (lower is better)
Translates to: TEATRGSFTPEARPGRGLGPRSP*PFWSVS
Trigger: TGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGCC...CAGGCCGCGCCCTGGTCTGGCCTCTGGGGTGAAGCTGCCTCTTGTTGCTTCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR CAA 90 bp ACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTTCTCAGAGGGTTCTGTaGGGCGCACAACACTTCTGT +
Preference number: 3 (lower is better)
Translates to: TRGPEPAPHWRSASGDKPSQRVL*GAQHFC
Trigger: ACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGA...AGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000444172.6
ENST00000587169.5
ENST00000590347.5
3UTR-3UTR CAA 90 bp CTGAGAGGACAGATGCGCCTCTTCTGGGCAAGCACAGTGACAAGGTCTGAGTGTCAACCACCCCTGTGCTaGGGCCGGCCTCCCCCTCAC +
Preference number: 3 (lower is better)
Translates to: LRGQMRLFWASTVTRSECQPPLC*GRPPPH
Trigger: GTGAGGGGGAGGCCGGCCCAAGCACAGGGGTGGTTG...ACACTCAGACCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTGTCCTCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR TCA 72 bp CCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGTGACCCCAGAGGTCAT +
Preference number: 3 (lower is better)
Translates to: PGQAAASSSCSR*SPSWDSDPRGH
Trigger: ATGACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
ENST00000592234.5
3UTR TCA 72 bp GAAGCAACAGCAGAACTAGCTAACCGGCTGGCCGTCTaGGGTCGCCCTGGGATGCCACGTGCCTCTGCTCTC +
Preference number: 3 (lower is better)
Translates to: EATAELANRLAV*GRPGMPRASAL
Trigger: GAGAGCAGAGGCACGTGGCATCCCAGGGCGACCTCAGACGGCCAGCCGGTTAGCTAGTTCTGCTGTTGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CCA 72 bp TTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTaGGGCGCACAGCACAGATGGACGCAGGGGCTGGGG +
Preference number: 3 (lower is better)
Translates to: FKNLSGTSARLL*GAQHRWTQGLG
Trigger: CCCCAGCCCCTGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR CCA 72 bp GTCATCGCTGCTCTCAGGCCACCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCTCGAATTACAGGGCTAT +
Preference number: 3 (lower is better)
Translates to: VIAALRPPFPES*PGPFNLELQGY
Trigger: ATAGCCCTGTAATTCGAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGGTGGCCTGAGAGCAGCGATGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000592234.5
3UTR CCA 72 bp ATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTaGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGC +
Preference number: 3 (lower is better)
Translates to: IRIRLSQGSTSL*ARTGRPVSCRR
Trigger: GCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR CAA 90 bp GACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGACGCAGGGGCTGGGTCTCAGAGGGTTCTGTaGGGCGCACAACACTTCTGT +
Preference number: 3 (lower is better)
Translates to: DVCTSTVGRTAQMDAGAGSQRVL*GAQHFC
Trigger: ACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGA...CCCAGCCCCTGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR CAA 90 bp CCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGAGTTGGGGCTGCCTCCAGCTCTaGTTCCAGGTGAAGTCCCTC +
Preference number: 3 (lower is better)
Translates to: PHPPGSYHTTLRNVTRSWGCLQL*FQVKSL
Trigger: GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCC...CCAACTCCGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR GCA 72 bp CCTCCCTTTCTAGCTCTGCAGGCCCCAGGGAAGGCTTaGAGACCCGCTGCTTCTCCACCTTCTCTCTCTGCT +
Preference number: 3 (lower is better)
Translates to: PPFLALQAPGKA*RPAASPPSLSA
Trigger: AGCAGAGAGAGAAGGTGGAGAAGCAGCGGGTCTGCAAGCCTTCCCTGGGGCCTGCAGAGCTAGAAAGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CCA 72 bp AGCCAAGGGAGCAGCTTGCGTCTCAGAGGGTTCTGTTaGGCGCACAACACTTCTGTCCTCCGAGGGCTGCAG +
Preference number: 3 (lower is better)
Translates to: SQGSSLRLRGFC*AHNTSVLRGLQ
Trigger: CTGCAGCCCTCGGAGGACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGACGCAAGCTGCTCCCTTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CCA 72 bp TCTGCACCTTGGCGCAGCTGGAGCCAGCTACCCGTATaGGATGGAGCTATGTGGGCCAGTGTGGGCTCTAGA +
Preference number: 3 (lower is better)
Translates to: SAPWRSWSQLPV*DGAMWASVGSR
Trigger: TCTAGAGCCCACACTGGCCCACATAGCTCCATCCCATACGGGTAGCTGGCTCCAGCTGCGCCAAGGTGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CCA 72 bp AGCCACCACTCTGACTCCGGCTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCACTCCTGGACTCGAACC +
Preference number: 3 (lower is better)
Translates to: SHHSDSGCYSSL*SLRSPHSWTRT
Trigger: GGTTCGAGTCCAGGAGTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCAGCCGGAGTCAGAGTGGTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
3UTR CCA 72 bp GTCATCGCTGCTCTCAGGCCACCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCGTAACTGTCATAACTGT +
Preference number: 3 (lower is better)
Translates to: VIAALRPPFPES*PGPFNRNCHNC
Trigger: ACAGTTATGACAGTTACGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGGTGGCCTGAGAGCAGCGATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591376.5
3UTR-3UTR CAA 90 bp GCTCCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAGCGGTCAGGCTGGGTTaGACAAGATCAGAACCGAAA +
Preference number: 3 (lower is better)
Translates to: APGQLLPHPPGSYHTTLRAVRLG*TRSEPK
Trigger: TTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGC...TCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR CAA 90 bp CTGGGTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCCAGGGCTCCACATCGTaGTGGGCAAGGACTGGCCGC +
Preference number: 3 (lower is better)
Translates to: LGAHVALYSNPTFTGLHIQGSTS*WARTGR
Trigger: GCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTG...GATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR CAA 90 bp GTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGGCCCTCGCTCTCCCTaGCCTTTTTGGTCAGTCTCA +
Preference number: 3 (lower is better)
Translates to: VAATPAGVLPHYTQKRHTGPRSP*PFWSVS
Trigger: TGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGCC...CGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
3UTR GCA 72 bp CACCACGGTACCCACGGGATCGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGATCTGCCGTCCATCTA +
Preference number: 3 (lower is better)
Translates to: HHGTHGIGCLTT*LPGLLGSAVHL
Trigger: TAGATGGACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTACCGTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
3UTR CCA 72 bp ACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTG +
Preference number: 3 (lower is better)
Translates to: TLPESTYRGQAS*ASGCLQLLFQV
Trigger: CACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
3UTR-3UTR CAA 90 bp CTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGATGGAGTATGCGTGGGGCTCCAGGGCAGTaGCTGCCACACCCGCCGGGG +
Preference number: 3 (lower is better)
Translates to: LRTRIPQPLQIQHRWSMRGAPGQ*LPHPPG
Trigger: CCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCC...ACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR TCA 72 bp CACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTaGCTTACCGTAACTGTCATAACTGTCTCTGTAGGA +
Preference number: 3 (lower is better)
Translates to: HRRPQQRGALGV*LTVTVITVSVG
Trigger: TCCTACAGAGACAGTTATGACAGTTACGGTAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR CAA 90 bp CTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTCTTCTGGTACCCACGGGATCGGTaGTCTGACGACTTGCCTGCC +
Preference number: 3 (lower is better)
Translates to: LLRPAIEMALRGQMRLFWYPRDR*SDDLPA
Trigger: GGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTA...CCAGAAGAGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
3UTR TCA 72 bp GATGCGCCTCTTCTGGGCAAGCACAGTGACAAGGTCTaGGTGTCCAGCCTAAAGTGCTTGGAGAGGGCACCA +
Preference number: 3 (lower is better)
Translates to: DAPLLGKHSDKV*VSSLKCLERAP
Trigger: TGGTGCCCTCTCCAAGCACTTTAGGCTGGACACTCAGACCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR CAA 90 bp TGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGCTGCCTCCAGCTCTaGTTCCAGGTGAAGTCCCTC +
Preference number: 3 (lower is better)
Translates to: CTRGPLFESDFHRAPHRCGCLQL*FQVKSL
Trigger: GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCC...ACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
3UTR-3UTR CAA 90 bp CCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGACGCAAGTCTCATTTGGCTTTaGCGTCCTGCGATAGAAATG +
Preference number: 3 (lower is better)
Translates to: PLRDVCTSTVGRTAQMDASLIWL*RPAIEM
Trigger: CATTTCTATCGCAGGACGCAAAAGCCAAATGAGACT...TGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
3UTR TCA 72 bp AGGCCATCCCGGCGTCAGAAGCGGTCAGGCTGGGTTTaGCAAGATCAGAACCGAAATGACTACGAAAGTGGG +
Preference number: 3 (lower is better)
Translates to: RPSRRQKRSGWV*QDQNRNDYESG
Trigger: CCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGCTTCTGACGCCGGGATGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
3UTR TCA 72 bp CACCACTCTGACTCCGGCTGCAAGACAGACAAACGTTaGGTACCGGAAGGTACCCGTCTACTTCTGCTCTGC +
Preference number: 3 (lower is better)
Translates to: HHSDSGCKTDKR*VPEGTRLLLLC
Trigger: GCAGAGCAGAAGTAGACGGGTACCTTCCGGTACTCAACGTTTGTCTGTCTTGCAGCCGGAGTCAGAGTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR GCA 72 bp TCTGTTGGGCGCACAACACTTCTGTCCTCCGAGGGCTaGAGCTTCCATAGGCTAGCAGAGAATGCTCAGAAC +
Preference number: 3 (lower is better)
Translates to: SVGRTTLLSSEG*SFHRLAENAQN
Trigger: GTTCTGAGCATTCTCTGCTAGCCTATGGAAGCTGCAGCCCTCGGAGGACAGAAGTGTTGTGCGCCCAACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR CAA 90 bp TTGTGTGTAGCTGAGGACAAGAAGCAGGCACAGTGTAAAGGCACCGAAGCAACATACCCACGGGATCGGTaGTCTGACGACTTGCCTGCC +
Preference number: 3 (lower is better)
Translates to: LCVAEDKKQAQCKGTEATYPRDR*SDDLPA
Trigger: GGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTA...TGTTGCTTCGGTGCCTTTACACTGTGCCTGCTTCTTGTCCTCAGCTACACACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR TCA 72 bp AGTCACAGGAACATTCCCCGGGCACATGACTTTCAGTaGGCTCTCAACAAGAGGGATGTGGACACGAGCGGA +
Preference number: 3 (lower is better)
Translates to: SHRNIPRAHDFQ*ALNKRDVDTSG
Trigger: TCCGCTCGTGTCCACATCCCTCTTGTTGAGAGCTCACTGAAAGTCATGTGCCCGGGGAATGTTCCTGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR GCA 72 bp GCTGCAGGAGCCCGCAGCAAGGAGTGTGTGGTGCAATaGAAGGGAATTGTCAGAGCAAGGTTCATTTCACAC +
Preference number: 3 (lower is better)
Translates to: AAGARSKECVVQ*KGIVRARFISH
Trigger: GTGTGAAATGAACCTTGCTCTGACAATTCCCTTGCATTGCACCACACACTCCTTGCTGCGGGCTCCTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CCA 72 bp ATAGAAATGGCTCTGAGAGGACAGATGCGCCTCTTCTaGGCAAGCACAGTGACAAGGTCTGAGTGTCCAGCC +
Preference number: 3 (lower is better)
Translates to: IEMALRGQMRLF*ASTVTRSECPA
Trigger: GGCTGGACACTCAGACCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTGTCCTCTCAGAGCCATTTCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR CAA 90 bp AGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGGTTGTCTGACGACTaGCCTGCCTGGTCTACTCGG +
Preference number: 3 (lower is better)
Translates to: SLIWLLRPAIEMALRGQMRLSDD*PAWSTR
Trigger: CCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCG...CATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
3UTR TCA 72 bp CCCTTCAACCTCGAATTACAGGGCTATTTCCACATATaGGCTAGCCAAGGGAGCAGCTTGCGTCTCAGAGGG +
Preference number: 3 (lower is better)
Translates to: PFNLELQGYFHI*ASQGSSLRLRG
Trigger: CCCTCTGAGACGCAAGCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGCCCTGTAATTCGAGGTTGAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444172.6
ENST00000585914.5
3UTR-3UTR CAA 90 bp AGCAGGCACAGTGTAAAGGCACCGAAGCAACAAGAGGCAGCTTCACCCCAGAGGAAGGGTTTTTACTCGTaGTGTGTAGCTGAGGACAAG +
Preference number: 3 (lower is better)
Translates to: SRHSVKAPKQQEAASPQRKGFYS*CVAEDK
Trigger: CTTGTCCTCAGCTACACACAACGAGTAAAAACCCTT...CCTCTGGGGTGAAGCTGCCTCTTGTTGCTTCGGTGCCTTTACACTGTGCCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR CAA 90 bp AAACACACAGCCATTGGAAGGACGATCTTGAGCAGGAAGGGTTTTTACTCGTTGCGGTTGTCTGACGACTaGCCTGCCTGGTCTACTCGG +
Preference number: 3 (lower is better)
Translates to: KHTAIGRTILSRKGFYSLRLSDD*PAWSTR
Trigger: CCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCG...CAACGAGTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAATGGCTGTGTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR TCA 72 bp AGGAGTTACCTCGAATTACAGGGCTATTTCCACATATaGGCTAGCCAAGGGAGCAGCTTGCGTCTCAGAGGG +
Preference number: 3 (lower is better)
Translates to: RSYLELQGYFHI*ASQGSSLRLRG
Trigger: CCCTCTGAGACGCAAGCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGCCCTGTAATTCGAGGTAACTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR CAA 90 bp CGGCTGCAAGACAGACAAACGTTGAGTACCGGAAGGTACCCGTCTACTTCTGCTAAGGGTTTTTACTCGTaGTGTGTAGCTGAGGACAAG +
Preference number: 3 (lower is better)
Translates to: RLQDRQTLSTGRYPSTSAKGFYS*CVAEDK
Trigger: CTTGTCCTCAGCTACACACAACGAGTAAAAACCCTT...AGCAGAAGTAGACGGGTACCTTCCGGTACTCAACGTTTGTCTGTCTTGCAGCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR GCA 72 bp TGCCTTTTTGGTCAGTCTCATTTGGCTTTTGCGTCCTaGGATAGAAATGGCTCTGAGAGGACAGATGCGCCT +
Preference number: 3 (lower is better)
Translates to: CLFGQSHLAFAS*DRNGSERTDAP
Trigger: AGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAAAAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR GCA 72 bp ATCCAAAAGGCGGGGGCGTTCACTGGTCTTCAATCCTaGTTAAGGGATTTCATCTATGAGCCAGGCATGACT +
Preference number: 3 (lower is better)
Translates to: IQKAGAFTGLQS*LRDFIYEPGMT
Trigger: AGTCATGCCTGGCTCATAGATGAAATCCCTTAAGCAGGATTGAAGACCAGTGAACGCCCCCGCCTTTTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR CCA 72 bp CACATGACTTTCAGTGAGCTCTCAACAAGAGGGATGTaGACACGAGCGGAAGGAGTTACCTCGAATTACAGG +
Preference number: 3 (lower is better)
Translates to: HMTFSELSTRGM*TRAEGVTSNYR
Trigger: CCTGTAATTCGAGGTAACTCCTTCCGCTCGTGTCCACATCCCTCTTGTTGAGAGCTCACTGAAAGTCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR CAA 90 bp TTCCTCAGCCACTGCAAATACAACATCGATGGAGTATGCGTACGTCTTCCAGTATCTCAGAGGGTTCTGTaGGGCGCACAACACTTCTGT +
Preference number: 3 (lower is better)
Translates to: FLSHCKYNIDGVCVRLPVSQRVL*GAQHFC
Trigger: ACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGA...TACTGGAAGACGTACGCATACTCCATCGATGTTGTATTTGCAGTGGCTGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR-3UTR CAA 90 bp GGGTTTGACAAGATCAGAACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTGCGGTCAGGCTGGGTTaGACAAGATCAGAACCGAAA +
Preference number: 3 (lower is better)
Translates to: GFDKIRTEMTTKVGIQGGAVRLG*TRSEPK
Trigger: TTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGC...ACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
3UTR-3UTR CAA 90 bp AGTCTCATTTGGCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGTTTGGTCAGTCTCATTaGGCTTTTGCGTCCTGCGAT +
Preference number: 3 (lower is better)
Translates to: SLIWLLRPAIEMALRGQMFGQSH*AFASCD
Trigger: ATCGCAGGACGCAAAAGCCAAATGAGACTGACCAAA...CATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAAATGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
3UTR-3UTR CAA 90 bp AGCCAAAGAAAACTGCGTACAAGAATTCCTCAGCCACTGCAAATACAACATCGAGCGGTCAGGCTGGGTTaGACAAGATCAGAACCGAAA +
Preference number: 3 (lower is better)
Translates to: SQRKLRTRIPQPLQIQHRAVRLG*TRSEPK
Trigger: TTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGC...TCGATGTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR-3UTR CAA 90 bp GAGTGTGTGGTGCAATGCAAGGGAATTGTCAGAGCAAGGTTCATTTCACACGGTATTGGAAGGACGATCTaGAGCAGGAAGGGTTTTTAC +
Preference number: 3 (lower is better)
Translates to: ECVVQCKGIVRARFISHGIGRTI*SRKGFY
Trigger: GTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAAT...ACCGTGTGAAATGAACCTTGCTCTGACAATTCCCTTGCATTGCACCACACACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
3UTR TCA 72 bp GCGGTCAGGCTGGGTTTGACAAGATCAGAACCGAAATaGCTACGAAAGTGGGAATACAAGGAGGTGCATTTA +
Preference number: 3 (lower is better)
Translates to: AVRLGLTRSEPK*LRKWEYKEVHL
Trigger: TAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
3UTR-3UTR CAA 90 bp ACACGGTCTTTTAATCGGCTTCGTAAAGCCAAAGAAAACTGCGTACAAGAATTCGCGGTCAGGCTGGGTTaGACAAGATCAGAACCGAAA +
Preference number: 3 (lower is better)
Translates to: TRSFNRLRKAKENCVQEFAVRLG*TRSEPK
Trigger: TTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCGC...GAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAGCCGATTAAAAGACCGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
3UTR GCA 72 bp AACCGAAATGACTACGAAAGTGGGAATACAAGGAGGTaGATTTACTACACATTAACGTTCAGCGAAGCTCCC +
Preference number: 3 (lower is better)
Translates to: NRNDYESGNTRR*IYYTLTFSEAP
Trigger: GGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCCACTTTCGTAGTCATTTCGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000585630.5
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
3UTR-3UTR CAA 90 bp TACAAGGAGGTGCATTTACTACACATTAACGTTCAGCGAAGCTCCCACAATCTTATTGGAAGGACGATCTaGAGCAGGAAGGGTTTTTAC +
Preference number: 3 (lower is better)
Translates to: YKEVHLLHINVQRSSHNLIGRTI*SRKGFY
Trigger: GTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAAT...AAGATTGTGGGAGCTTCGCTGAACGTTAATGTGTAGTAAATGCACCTCCTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000593048.5
3UTR TCA 72 bp CGGCAACAGACATCAGAGAAAGCTAAGTTAAGAGTGTaGCTTAAAGAGGTCTGGAAAAGACGGTCAATTGAG +
Preference number: 3 (lower is better)
Translates to: RQQTSEKAKLRV*LKEVWKRRSIE
Trigger: CTCAATTGACCGTCTTTTCCAGACCTCTTTAAGTCACACTCTTAACTTAGCTTTCTCTGATGTCTGTTGCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
3UTR GCA 72 bp CGGTCTTTTAATCGGCTTCGTAAAGCCAAAGAAAACTaGGTACAAGAATTCCTCAGCCACTGCAAATACAAC +
Preference number: 3 (lower is better)
Translates to: RSFNRLRKAKEN*VQEFLSHCKYN
Trigger: GTTGTATTTGCAGTGGCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTTACGAAGCCGATTAAAAGACCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp CAGGCGGGGGACCCGGCGCTCCCGGGAGGCGCTGCCCTGCACCCAACACACACCGAGAGCAGGACTCACTaGAACGCCCAGGTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: QAGDPALPGGAALHPTHTESRTH*NAQVPP
Trigger: GGGCGGCACCTGGGCGTTTCAGTGAGTCCTGCTCTC...GGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGCGCCGGGTCCCCCGCCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR GCA 90 bp GTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCGCGCACCGCAGCCCGTaGTCCAGGAGAGACTCGAGG +
Preference number: 4 (lower is better)
Translates to: VGKDWPPRKLPAHRSPCSAHRSP*SRRDSR
Trigger: CCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGC...GGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp GGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGCCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCTC +
Preference number: 4 (lower is better)
Translates to: GKDWPPRKLPAHRSPCSRPFPES*PGPFNL
Trigger: GAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGG...CCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000592234.5
CDS-3UTR TCA 90 bp GGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGATGCCATGGCGGCCACTaGGTCGGGCAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: GRPVSCRRTAARAPGETRCHGGH*VGQVPD
Trigger: GTCAGGGACCTGCCCGACTCAGTGGCCGCCATGGCA...TCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR TCA 90 bp TGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGTGCCATGGCGGCCACTaGGTCGGGCAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: WPPRKLPAHRSPCSRRDSCHGGH*VGQVPD
Trigger: GTCAGGGACCTGCCCGACTCAGTGGCCGCCATGGCA...CGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR TCA 90 bp CGGCGCTCCCGGGAGGCGCTGCCCTGCACCCAACACACACCGAAAGGCGCCCGCACACATGCACCTAGCTaGCTGCCCAGCGGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: RRSREALPCTQHTPKGARTHAPS*LPSGPS
Trigger: CGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGT...GCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGCGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587896.6
CDS-3UTR GCA 90 bp AGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCGCACCGCAGCCCGTaGTCCAGGAGAGACTCGAGG +
Preference number: 4 (lower is better)
Translates to: SCRRTAARAPGETRGPEPAHRSP*SRRDSR
Trigger: CCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGC...GGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR GCA 90 bp GGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGATGCCCAGGGCGGGTCTaGACCTTGGCGCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GRPVSCRRTAARAPGETRCPGRV*TLAQLE
Trigger: CTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCA...TCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp CAGGCGGGGGACCCGGCGCTCCCGGGAGGCGCTGCCCTGCACCCAACACACACCCGGGAGGCGCTGCCCTaGACCCAACACACACCGAAA +
Preference number: 4 (lower is better)
Translates to: QAGDPALPGGAALHPTHTREALP*TQHTPK
Trigger: TTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCG...GGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGCGCCGGGTCCCCCGCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp GTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: VGKDWPPRKLPAHRSPCSRGQAS*ASGCLQ
Trigger: CTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT...GGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp GCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGGGCTCCACATCGTTGTaGGCAAGGACTGGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: AAGAPQPVLQERLEALSPGSTSL*ARTGRP
Trigger: GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCC...CGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp TGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCACCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCTG +
Preference number: 4 (lower is better)
Translates to: WARTGRPVSCRRTAARAPPFPES*PGPFNL
Trigger: CAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGG...TGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp TCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTTGCCATGGCGGCCACTaGGTCGGGCAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: SLWARTGRPVSCRRTAARCHGGH*VGQVPD
Trigger: GTCAGGGACCTGCCCGACTCAGTGGCCGCCATGGCA...ACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR TCA 90 bp GCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTCCTGGGCAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 4 (lower is better)
Translates to: ALSPHLTGEAPQGTSLLGRDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...GCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR GCA 90 bp GGCACCAAGGTGAACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGCTCCAGGGCAGTTGCTaGCACACCCGCCGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: GTKVNRAPTAGHSSVAPSLQGSC*HTRRGP
Trigger: AGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAG...CGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTTGGTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp GGGCTGGGGCTCCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTAGGGCTCCAGGGCAGTTaGTGCCACACCCGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: GLGLQGSCCHTRRGPTTLGLQGS*CHTRRG
Trigger: ACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCC...TAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCCAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp ATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGGCGCACCGCAGCCCGTaGTCCAGGAGAGACTCGAGG +
Preference number: 4 (lower is better)
Translates to: IVVGKDWPPRKLPAHRSPAHRSP*SRRDSR
Trigger: CCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGC...CGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp CGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: RPVSCRRTAARAPGETRGRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...GCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp TGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGCAGGCCACAGCAGCGTaGCGCCCTCGGAGTGTGACT +
Preference number: 4 (lower is better)
Translates to: WPPRKLPAHRSPCSRRDSQATAA*RPRSVT
Trigger: AGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTG...CGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp TTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTGAGCCCGCACCTCACTaGCGAAGCGCCTCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: LWARTGRPVSCRRTAARAEPAPH*RSASGD
Trigger: GTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTC...AGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp CCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCGTTGTGGGCAAGGACTaGCCGCCCCGTAAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: PRKLPAHRSPCSRRDSRPVVGKD*PPRKLP
Trigger: CGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAAC...GGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR TCA 90 bp GCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCTGCCATGGCGGCCACTaGGTCGGGCAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: ARAPGETRGPEPAPHWRSCHGGH*VGQVPD
Trigger: GTCAGGGACCTGCCCGACTCAGTGGCCGCCATGGCA...GCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR TCA 90 bp CGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACGAGAGGGCACCAAGGTaGACCGAGCTCCCACCGCAG +
Preference number: 4 (lower is better)
Translates to: RTAARAPGETRGPEPAPHERAPR*TELPPQ
Trigger: CTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTCTC...GTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp CGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTTCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: RRTAARAPGETRGPEPAPSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...AGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR TCA 90 bp CGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTCCTAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 4 (lower is better)
Translates to: RGPEPAPHWRSASGDKPPRDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...AGGAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR TCA 90 bp GTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 4 (lower is better)
Translates to: VSCRRTAARAPGETRGPERDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...CTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR GCA 90 bp CTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGCTCCAGGGCAGTTaGTGCCACACCCGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: LQERLEALSPHLTGEAPQGLQGS*CHTRRG
Trigger: ACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCC...CTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp TGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGATGCACCTAGCTGACTaGCCAGCGGGCCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: WPPRKLPAHRSPCSRRDSMHLAD*PAGPRS
Trigger: AGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCAT...CGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp CGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTGAGGTCGCCCTGGGATaGCACGTGCCTCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: RRTAARAPGETRGPEPAPEVALG*HVPLLS
Trigger: AGAGAGCAGAGGCACGTGGCATCCCAGGGCGACCTC...AGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp GGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGTCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: GKDWPPRKLPAHRSPCSRSWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...CCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR GCA 90 bp GCCCTGAGCCCGCACCTCACTGGCGAAGCGCAGGGGACAAGCCTCCTGGGCAAGGCGCACCGCAGCCCGTaGTCCAGGAGAGACTCGAGG +
Preference number: 4 (lower is better)
Translates to: ALSPHLTGEAQGTSLLGKAHRSP*SRRDSR
Trigger: CCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGC...CTTGCCCAGGAGGCTTGTCCCCTGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585913.5
CDS-3UTR GCA 90 bp GGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCGCACCGCAGCCCGTaGTCCAGGAGAGACTCGAGG +
Preference number: 4 (lower is better)
Translates to: GSTSLWARTGRPVSCRRTAHRSP*SRRDSR
Trigger: CCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGC...GGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR GCA 90 bp GGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACGCTCCCGGGAGGCGCTaGCCTGCACCCAACACACAC +
Preference number: 4 (lower is better)
Translates to: GLHIVVGKDWPPRKLPAHAPGRR*PAPNTH
Trigger: GTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGC...GTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp GAGGGCACCAAGGTGAACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: EGTKVNRAPTAGHSSVAPRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...GGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CCA 90 bp GCCCGCACCTCACTGGCGAAGCGCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCGGCTCCACATCGTTGTaGGCAAGGACTGGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: ARTSLAKRRGQASWASGCGSTSL*ARTGRP
Trigger: GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCC...GCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGCGCTTCGCCAGTGAGGTGCGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585913.5
CDS-3UTR CCA 90 bp CCAGCATGCCCAGGGCGGGTCTGCACCTTGGCGCAGCTGGAGCCAGCTACCCGTCCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCTG +
Preference number: 4 (lower is better)
Translates to: PACPGRVCTLAQLEPATRPFPES*PGPFNL
Trigger: CAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGG...ACGGGTAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCATGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp CACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCGT +
Preference number: 4 (lower is better)
Translates to: HIVVGKDWPPRKLPAHRSPFPES*PGPFNR
Trigger: ACGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGG...GCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000589235.5
ENST00000591376.5
CDS-3UTR TCA 90 bp CGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTCCTAGTCGGGCAGGTCCCTaGCGCAAGCGGGAAGACAGC +
Preference number: 4 (lower is better)
Translates to: RGPEPAPHWRSASGDKPPSRAGP*RKREDS
Trigger: GCTGTCTTCCCGCTTGCGTCAGGGACCTGCCCGACT...AGGAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR TCA 90 bp CAGCTTCACCCCAGAGGCCAGACCAGGGCGCGGCCTGCGGCCGGGGAGCAACCAACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: QLHPRGQTRARPAAGEQPTGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...TGGTTGCTCCCCGGCCGCAGGCCGCGCCCTGGTCTGGCCTCTGGGGTGAAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000591097.5
CDS-3UTR TCA 90 bp CCTCCTCCTCTAGAGAACCCACGGCCCCGTCCTCGGCCCCCACGGAAGAAGCCCGAGAGGGCACCAAGGTaGACCGAGCTCCCACCGCAG +
Preference number: 4 (lower is better)
Translates to: PPPLENPRPRPRPPRKKPERAPR*TELPPQ
Trigger: CTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTCTC...GGGCTTCTTCCGTGGGGGCCGAGGACGGGGCCGTGGGTTCTCTAGAGGAGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
CDS-3UTR TCA 90 bp GGGAGGCGCTGCCCTGCACCCAACACACACCGAAAGGCGCCCGCCATGGGGCCATCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: GRRCPAPNTHRKAPAMGPSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...TGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR TCA 90 bp GGCACCAAGGTGAACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGCTAGTCAGGGGGCTGTaGCCTCAGGCTCCGTCACAG +
Preference number: 4 (lower is better)
Translates to: GTKVNRAPTAGHSSVAPSLVRGL*PQAPSQ
Trigger: CTGTGACGGAGCCTGAGGTCACAGCCCCCTGACTAG...CGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTTGGTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp ACCGAAGCAACAAGAGGCAGCTTCACCCCAGAGGCCAGACCAGGGCGCGGCCTGGGGCTCCAGGGCAGTTaGTGCCACACCCGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: TEATRGSFTPEARPGRGLGLQGS*CHTRRG
Trigger: ACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCC...CAGGCCGCGCCCTGGTCTGGCCTCTGGGGTGAAGCTGCCTCTTGTTGCTTCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp GGCACCAAGGTGAACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGCCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: GTKVNRAPTAGHSSVAPSPLRDV*TSTVGR
Trigger: GCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG...CGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTTGGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp AAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAATGCACCTAGCTGACTaGCCAGCGGGCCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: KDWPPRKLPAHRSPCSRRMHLAD*PAGPRS
Trigger: AGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCAT...TCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp AGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCTCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SCRRTAARAPGETRGPEPSWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...GGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR GCA 90 bp GGACCCGGCGCTCCCGGGAGGCGCTGCCCTGCACCCAACACACACCGAAAGGCGCCATGGGGCCATAGGTaGGGGAGAGCAGGACTCACT +
Preference number: 4 (lower is better)
Translates to: GPGAPGRRCPAPNTHRKAPWGHR*GRAGLT
Trigger: AGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGG...CGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGCGCCGGGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR GCA 90 bp GCTGCCCTGCACCCAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGCTCCCGGGAGGCGCTaGCCTGCACCCAACACACAC +
Preference number: 4 (lower is better)
Translates to: AALHPTHTERRPPWGHRCAPGRR*PAPNTH
Trigger: GTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGC...GCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR GCA 90 bp GGCACCAAGGTGAACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGCGTTGACACGCACCTaGGCACACCTGCCGCTTTGC +
Preference number: 4 (lower is better)
Translates to: GTKVNRAPTAGHSSVAPSALTRT*AHLPLC
Trigger: GCAAAGCGGCAGGTGTGCGCAGGTGCGTGTCAACGC...CGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTTGGTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586548.5
CDS-3UTR CCA 90 bp ACCGGCTGGCCGTCTGAGGTCGCCCTGGGATGCCACGTGCCTCTGCTCTCTGGCCAGGCCACAGCAGCGTaGCGCCCTCGGAGTGTGACT +
Preference number: 4 (lower is better)
Translates to: TGWPSEVALGCHVPLLSGQATAA*RPRSVT
Trigger: AGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTG...GCCAGAGAGCAGAGGCACGTGGCATCCCAGGGCGACCTCAGACGGCCAGCCGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp CGCACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCACAGCCGAGGGAGGCTaGCCTGCGGCCACACATGCA +
Preference number: 4 (lower is better)
Translates to: RTSLAKRLRGQASWASGCTAEGG*PAATHA
Trigger: TGCATGTGTGGCCGCAGGCCAGCCTCCCTCGGCTGT...GCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR CCA 90 bp ACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: TAARAPGETRGPEPAPHWRGQAS*ASGCLQ
Trigger: CTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT...CCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp TCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGAGCCCGCACCTCACTaGCGAAGCGCCTCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: STSLWARTGRPVSCRRTAEPAPH*RSASGD
Trigger: GTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTC...TGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp CTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCGGCTCCACATCGTTGTaGGCAAGGACTGGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: LHIVVGKDWPPRKLPAHRGSTSL*ARTGRP
Trigger: GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCC...GCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp GGCGAAGCGCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTCCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCGT +
Preference number: 4 (lower is better)
Translates to: GEAPQGTSLLGKRLPPALPFPES*PGPFNR
Trigger: ACGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGG...AAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000586636.5
ENST00000591376.5
CDS-3UTR TCA 90 bp GGGGCTCCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGTCGGGCAGGTCCCTaGCGCAAGCGGGAAGACAGC +
Preference number: 4 (lower is better)
Translates to: GAPGQLLPHPPGSYHTTLSRAGP*RKREDS
Trigger: GCTGTCTTCCCGCTTGCGTCAGGGACCTGCCCGACT...GAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp CTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCCATGGCGGCCACTaGGTCGGGCAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: LCRTRPSSGHCSHHSDSGCHGGH*VGQVPD
Trigger: GTCAGGGACCTGCCCGACTCAGTGGCCGCCATGGCA...GCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000591376.5
ENST00000593048.5
CDS-3UTR TCA 90 bp ATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: IVVGKDWPPRKLPAHRSPTGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...CGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
CDS-3UTR TCA 90 bp GGGGCTCCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCGAGAGGGCACCAAGGTaGACCGAGCTCCCACCGCAG +
Preference number: 4 (lower is better)
Translates to: GAPGQLLPHPPGSYHTTLERAPR*TELPPQ
Trigger: CTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTCTC...GAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp CTTCACCCCAGAGGCCAGACCAGGGCGCGGCCTGCGGCCGGGGAGCAACCACCCTCTGGGCAAGCACAGTaGCAAGGTCTGAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: LHPRGQTRARPAAGEQPPSGQAQ*QGLSVQ
Trigger: CTGGACACTCAGACCTTGTCACTGTGCTTGCCCAGA...GGGTGGTTGCTCCCCGGCCGCAGGCCGCGCCCTGGTCTGGCCTCTGGGGTGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp CTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGACACATGCACCTAGCTaGCTGCCCAGCGGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: LQERLEALSPHLTGEAPQTHAPS*LPSGPS
Trigger: CGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGT...CTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR TCA 90 bp CAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCTCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: QGSTSLWARTGRPVSCRRSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...GCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR GCA 90 bp GTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGA +
Preference number: 4 (lower is better)
Translates to: VGKDWPPRKLPAHRSPCSGCLTT*LPGLLG
Trigger: TCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACC...GGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
CDS-3UTR GCA 90 bp TTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTTCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: LWARTGRPVSCRRTAARASWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...AGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR GCA 90 bp CGCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGCGCACCGCAGCCCGTaGTCCAGGAGAGACTCGAGG +
Preference number: 4 (lower is better)
Translates to: RLRGQASWASGCLQLLFQAHRSP*SRRDSR
Trigger: CCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGC...CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR GCA 90 bp CCAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAGCAGGAGCGCACCGCAGCCCGTaGTCCAGGAGAGACTCGAGG +
Preference number: 4 (lower is better)
Translates to: PTHTERRPPWGHRCGRAGAHRSP*SRRDSR
Trigger: CCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGC...TCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR GCA 90 bp ACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGGCCCCAGGGAAGGCTTaGAGACCCGCTGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TAARAPGETRGPEPAPHWAPGKA*RPAASP
Trigger: TGGAGAAGCAGCGGGTCTGCAAGCCTTCCCTGGGGC...CCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp CACCAAGGTGAACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGACTGTCCCTGCTAAGCTaGCCGCACAGTCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: HQGEPSSHRRPQQRGALGLSLLS*PHSPAL
Trigger: GAGGGCTGGACTGTGCGGGCAGCTTAGCAGGGACAG...TCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTTGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp CTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCCGGGAGGCGCTGCCCTaGACCCAACACACACCGAAA +
Preference number: 4 (lower is better)
Translates to: LHIVVGKDWPPRKLPAHRREALP*TQHTPK
Trigger: TTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCG...GCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp GGCGGGGGACCCGGCGCTCCCGGGAGGCGCTGCCCTGCACCCAACACACACCGACCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: GGGPGAPGRRCPAPNTHRPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...TCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGCGCCGGGTCCCCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp GCTGCCCTGCACCCAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: AALHPTHTERRPPWGHRCRGQAS*ASGCLQ
Trigger: CTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT...GCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp CTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTCCTGGGCAAGAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LSPHLTGEAPQGTSLLGKRGQAS*ASGCLQ
Trigger: CTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT...CTTGCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp TGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCGAGCCCGCACCTCACTaGCGAAGCGCCTCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: CRTRPSSGHCSHHSDSGCEPAPH*RSASGD
Trigger: GTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTC...GCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000591376.5
CDS-3UTR CCA 90 bp GCGAAGCGCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGGGCTCCACATCGTTGTaGGCAAGGACTGGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: AKRLRGQASWASGCLQLLGSTSL*ARTGRP
Trigger: GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCC...CAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp AACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTGACTTAACCCGGGACGGAAGCTaGCCATCCCGCAACCACCCC +
Preference number: 4 (lower is better)
Translates to: NRAPTAGHSSVAPSECDLTRDGS*PSRNHP
Trigger: GGGGTGGTTGCGGGATGGCCAGCTTCCGTCCCGGGT...TAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591097.5
CDS-3UTR CCA 90 bp AGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGCTTCATCTGATGCCATaGCGGCTACGAGCGGGTTCC +
Preference number: 4 (lower is better)
Translates to: RTGRPVSCRRTAARAPGELHLMP*RLRAGS
Trigger: GGAACCCGCTCGTAGCCGCCATGGCATCAGATGAAG...CTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585913.5
3UTR CAA 72 bp CGTCACAGGCCAGCATGCCCAGGGCGGGTCTGCACCTaGGCGCAGCTGGAGCCAGCTACCCGTATGGGATGG +
Preference number: 4 (lower is better)
Translates to: RHRPACPGRVCT*AQLEPATRMGW
Trigger: CCATCCCATACGGGTAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCATGCTGGCCTGTGACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp GCTCCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGATGCCATGGCGGCCACTaGGTCGGGCAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: APGQLLPHPPGSYHTTLRCHGGH*VGQVPD
Trigger: GTCAGGGACCTGCCCGACTCAGTGGCCGCCATGGCA...TCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp GGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGGATCTGTCCGTACTTTaGGAAGACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: GKDWPPRKLPAHRSPCSRDLSVL*EDLLQR
Trigger: TCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATC...CCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR TCA 90 bp GGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: GSTSLWARTGRPVSCRRTTGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...GGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
CDS-3UTR TCA 90 bp CCTCCTCCTCTAGAGAACCCACGGCCCCGTCCTCGGCCCCCACGGAAGAAGCCCACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: PPPLENPRPRPRPPRKKPTGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...GGGCTTCTTCCGTGGGGGCCGAGGACGGGGCCGTGGGTTCTCTAGAGGAGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
CDS-3UTR TCA 90 bp AGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGGGCGCCCTCGGAGTGTaGCTTACCGTAACTGTCATA +
Preference number: 4 (lower is better)
Translates to: RTGRPVSCRRTAARAPGEGALGV*LTVTVI
Trigger: TATGACAGTTACGGTAAGTCACACTCCGAGGGCGCC...CTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp GTCCCTGCTAAGCTGCCCGCACAGTCCAGCCCTCTGGCCACCACTGCCAGAAGCGAGAGGGCACCAAGGTaGACCGAGCTCCCACCGCAG +
Preference number: 4 (lower is better)
Translates to: VPAKLPAQSSPLATTARSERAPR*TELPPQ
Trigger: CTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTCTC...GCTTCTGGCAGTGGTGGCCAGAGGGCTGGACTGTGCGGGCAGCTTAGCAGGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp GAAGCGCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTAACCGGCTGGCCGTCTaGGGTCGCCCTGGGATGCCA +
Preference number: 4 (lower is better)
Translates to: EAPQGTSLLGKRLPPALVNRLAV*GRPGMP
Trigger: TGGCATCCCAGGGCGACCTCAGACGGCCAGCCGGTT...AACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGCGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000444172.6
ENST00000587169.5
ENST00000590347.5
CDS-3UTR TCA 90 bp GCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACGGCTATTTCCACATATaGGCTAGCCAAGGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: AGAPQPVLQERLEALSPHGYFHI*ASQGSS
Trigger: GCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGCC...GTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
ENST00000592234.5
CDS-3UTR TCA 90 bp AGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 4 (lower is better)
Translates to: RTGRPVSCRRTAARAPGESSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...CTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR TCA 90 bp GCTCTCAGGCCACCCTTCCCCGAGTCCTGGCCGGGCCCCTTCAACCTCGAATTAAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 4 (lower is better)
Translates to: ALRPPFPESWPGPFNLELRDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...TAATTCGAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGGTGGCCTGAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000592234.5
CDS-3UTR TCA 90 bp TCAGGCCACCCTTCCCCGAGTCCTGGCCGGGCCCCTTCAACCTCGAATTACAGGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 4 (lower is better)
Translates to: SGHPSPSPGRAPSTSNYRRDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...CCTGTAATTCGAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGGTGGCCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000592234.5
CDS-3UTR TCA 90 bp GCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACAAGTTTGCCTTCATCTaGTGCCATGGCGGCTACGAG +
Preference number: 4 (lower is better)
Translates to: AGAPQPVLQERLEALSPHKFAFI*CHGGYE
Trigger: CTCGTAGCCGCCATGGCATCAGATGAAGGCAAACTT...GTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585913.5
CDS-3UTR GCA 90 bp CCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGGGCTCCAGGGCAGTTaGTGCCACACCCGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: PGQLLPHPPGSYHTTLRNGLQGS*CHTRRG
Trigger: ACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCC...GTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp CGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGGGCTCCAGGGCAGTTaGTGCCACACCCGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: RIRLSQGSTSLWARTGRPGLQGS*CHTRRG
Trigger: ACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCC...GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp CCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGATGCCACGTGCCTCTaGTCTCTGGCCTGCTTCGTA +
Preference number: 4 (lower is better)
Translates to: PVSCRRTAARAPGETRGPDATCL*SLACFV
Trigger: TACGAAGCAGGCCAGAGAGCAGAGGCACGTGGCATC...AGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444172.6
ENST00000585914.5
CDS-3UTR GCA 90 bp CAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGAGGTCGCCCTGGGATaGCACGTGCCTCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: QPVLQERLEALSPHLTGEEVALG*HVPLLS
Trigger: AGAGAGCAGAGGCACGTGGCATCCCAGGGCGACCTC...TTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp ACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCAGGTCAGCGTCAGGTaGACGTCCACTGTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: TSLWARTGRPVSCRRTAAQVSVR*TSTVPA
Trigger: AGCAGGGACAGTGGACGTGCACCTGACGCTGACCTG...GGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp GGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGGGCTCAGCGCCACATaGCACTCTTCCCGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: GSTSLWARTGRPVSCRRTGLSAT*HSSRKH
Trigger: GTGCTTTCGGGAAGAGTGGCATGTGGCGCTGAGCCC...GGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR GCA 90 bp GACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGACGCAGGGGCTGGGGCCATGGCGGCCTCCTaGACCCTGATACTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: DVCTSTVGRTAQMDAGAGAMAAS*TLILLP
Trigger: CGGGAGGAGTATCAGGGTGCAGGAGGCCGCCATGGC...CCCAGCCCCTGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586472.5
CDS-3UTR GCA 90 bp TCCCGCTTCTGCGAATGTCCTGAGCAGTCTCCTCTCCTCTTGGCCTGGGTCCCCCCGCAACCACCCCTGTaGTTGGGCCGGCCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: SRFCECPEQSPLLLAWVPPQPPL*LGRPPP
Trigger: AGGGGGAGGCCGGCCCAAGCACAGGGGTGGTTGCGG...GGGGACCCAGGCCAAGAGGAGAGGAGACTGCTCAGGACATTCGCAGAAGCGGGA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000591097.5
CDS-3UTR CCA 90 bp ATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGCTTCATCTGATGCCATaGCGGCCACTGAGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: IVVGKDWPPRKLPAHRSPLHLMP*RPLSRA
Trigger: TGCCCGACTCAGTGGCCGCCATGGCATCAGATGAAG...CGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR CCA 90 bp CGCCATGGGGCCATAGGTGCGGGAGAGCAGGACTCACTGAAACGCCCAGGTGCCCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: RHGAIGAGEQDSLKRPGARSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...GGCACCTGGGCGTTTCAGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp GGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGATGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: GRPVSCRRTAARAPGETRCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...TCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp CGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: RRTAARAPGETRGPEPAPCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...AGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp ACCGAAGCAACAAGAGGCAGCTTCACCCCAGAGGCCAGACCAGGGCGCGGCCTGACAGCCGAGGGAGGCTaGCCTGCGGCCACACATGCA +
Preference number: 4 (lower is better)
Translates to: TEATRGSFTPEARPGRGLTAEGG*PAATHA
Trigger: TGCATGTGTGGCCGCAGGCCAGCCTCCCTCGGCTGT...CAGGCCGCGCCCTGGTCTGGCCTCTGGGGTGAAGCTGCCTCTTGTTGCTTCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CCA 90 bp GCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGGGCTCCACATCGTTGTaGGCAAGGACTGGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: ASGDKPPGQAAASSSCSRGSTSL*ARTGRP
Trigger: GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCC...CCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp AGCATGCCCAGGGCGGGTCTGCACCTTGGCGCAGCTGGAGCCAGCTACCCGTATGGCGGGTCTGCACCTTaGCGCAGCTGGAGCCAGCTA +
Preference number: 4 (lower is better)
Translates to: SMPRAGLHLGAAGASYPYGGSAP*RSWSQL
Trigger: TAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCC...ATACGGGTAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCATGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp CCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACTGCCATGGCGGCCACTaGGTCGGGCAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: PGQLLPHPPGSYHTTLRNCHGGH*VGQVPD
Trigger: GTCAGGGACCTGCCCGACTCAGTGGCCGCCATGGCA...GTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp CCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCGATCTGTCCGTACTTTaGGAAGACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: PRKLPAHRSPCSRRDSRPDLSVL*EDLLQR
Trigger: TCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATC...GGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR TCA 90 bp GCGCTGCCCTGCACCCAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: ALPCTQHTPKGARHGAIGTGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...ACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR TCA 90 bp CCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTGACTTACCGTAACTGTACACATGCACCTAGCTaGCTGCCCAGCGGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: PPQATAAWRPRSVTYRNCTHAPS*LPSGPS
Trigger: CGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGT...ACAGTTACGGTAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp TGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGCTATTTCCACATATaGGCTAGCCAAGGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: WARTGRPVSCRRTAARAPGYFHI*ASQGSS
Trigger: GCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGCC...TGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
ENST00000592234.5
CDS-3UTR TCA 90 bp CTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCTTTCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: LQERLEALSPHLTGEAPLSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...AAGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585914.5
CDS-3UTR TCA 90 bp TCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGTCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: SQGSTSLWARTGRPVSCRSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...CCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR TCA 90 bp CAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 4 (lower is better)
Translates to: QASWASGCLQLLFQVKSLRDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR TCA 90 bp AGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 4 (lower is better)
Translates to: RGQASWASGCLQLLFQVKRDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...CTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR GCA 90 bp CGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGA +
Preference number: 4 (lower is better)
Translates to: RTAARAPGETRGPEPAPHGCLTT*LPGLLG
Trigger: TCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACC...GTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
CDS-3UTR GCA 90 bp AGCGCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCGAGGTCGCCCTGGGATaGCACGTGCCTCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SASGDKPPGQAAASSSCSEVALG*HVPLLS
Trigger: AGAGAGCAGAGGCACGTGGCATCCCAGGGCGACCTC...GGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000444172.6
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp TGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCATGGTCTACTCGGATCTaGCGTCCATCTACAGACTGG +
Preference number: 4 (lower is better)
Translates to: WARTGRPVSCRRTAARAPWSTRI*RPSTDW
Trigger: CCAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...TGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590347.5
CDS-3UTR GCA 90 bp CAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAGCAGGACCTGCTCAGGTCTGGCTaGAGGAGCCCGCAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: QHTPKGARHGAIGAGEQDLLRSG*RSPQQG
Trigger: TCCTTGCTGCGGGCTCCTGCAGCCAGACCTGAGCAG...GTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587896.6
CDS-3UTR GCA 90 bp CAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCGTCACAGGCCAGCATaGCCAGGGCGGGTCTGCACC +
Preference number: 4 (lower is better)
Translates to: QASWASGCLQLLFQVKSLRHRPA*PGRVCT
Trigger: GGTGCAGACCCGCCCTGGGCATGCTGGCCTGTGACG...GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp GCTCCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAGATGCCATGGCGGCCTaGCAGCCCAAGGTACCCTGC +
Preference number: 4 (lower is better)
Translates to: APGQLLPHPPGSYHTTLRDAMAA*QPKVPC
Trigger: GCAGGGTACCTTGGGCTGGCAGGCCGCCATGGCATC...TCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588030.5
CDS-3UTR GCA 90 bp CCTCCTCCTCTAGAGAACCCACGGCCCCGTCCTCGGCCCCCACGGAAGAAGCCCGGCCTCCCCCTCACCTaGTATAGTAGTCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PPPLENPRPRPRPPRKKPGLPLT*YSSLWS
Trigger: GCTCCAGAGACTACTATAGCAGGTGAGGGGGAGGCC...GGGCTTCTTCCGTGGGGGCCGAGGACGGGGCCGTGGGTTCTCTAGAGGAGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000591097.5
CDS-3UTR CCA 90 bp GGGCTGGGGCTCCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACTTCATCTGATGCCATaGCGGCCACTGAGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: GLGLQGSCCHTRRGPTTLLHLMP*RPLSRA
Trigger: TGCCCGACTCAGTGGCCGCCATGGCATCAGATGAAG...TAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp ACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCTTCATCTGATGCCATaGCGGCCACTGAGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: TAARAPGETRGPEPAPHWLHLMP*RPLSRA
Trigger: TGCCCGACTCAGTGGCCGCCATGGCATCAGATGAAG...CCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR CCA 90 bp CCTCCTCCTCTAGAGAACCCACGGCCCCGTCCTCGGCCCCCACGGAAGAAGCCCGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: PPPLENPRPRPRPPRKKPDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...GGGCTTCTTCCGTGGGGGCCGAGGACGGGGCCGTGGGTTCTCTAGAGGAGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
CDS-3UTR CCA 90 bp GTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: VSCRRTAARAPGETRGPEDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...CTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
CDS-3UTR CCA 90 bp AAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGACAGATGCGCCTCTTCTaGGCAAGCACAGTGACAAGG +
Preference number: 4 (lower is better)
Translates to: KDWPPRKLPAHRSPCSRRQMRLF*ASTVTR
Trigger: CCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTG...TCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp CGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCACCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCTC +
Preference number: 4 (lower is better)
Translates to: RLPPALVPGEVPPGTVTPPFPES*PGPFNL
Trigger: GAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGG...TGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000592234.5
CDS-3UTR CCA 90 bp AGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTCCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCTC +
Preference number: 4 (lower is better)
Translates to: SLLGKRLPPALVPGEVPPPFPES*PGPFNL
Trigger: GAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGG...AGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000592234.5
CDS-3UTR CCA 90 bp CCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTCATCGCTGCTCTCAGGGAGCCCGCACCTCACTaGCGAAGCGCCTCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: PGEVPPGTVTPEVIAALREPAPH*RSASGD
Trigger: GTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTC...CCTGAGAGCAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp CCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAGCAGGACTCACTGAAAGTTGTGGGCAAGGACTaGCCGCCCCGTAAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: PKGARHGAIGAGEQDSLKVVGKD*PPRKLP
Trigger: CGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAAC...TTTCAGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp GAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAGCAGGACTCACTGAAACGGGCTCCACATCGTTGTaGGCAAGGACTGGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: ERRPPWGHRCGRAGLTETGSTSL*ARTGRP
Trigger: GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCC...CGTTTCAGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp GAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCTTACAGGGGACAAGCCTGAGCCCGCACCTCACTaGCGAAGCGCCTCTTACAGG +
Preference number: 4 (lower is better)
Translates to: EALSPHLTGEAPLTGDKPEPAPH*RSASYR
Trigger: CCTGTAAGAGGCGCTTCGCCAGTGAGGTGCGGGCTC...AGGCTTGTCCCCTGTAAGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585914.5
3UTR CAA 72 bp CCCCCGGCAGAGCCACCACGGTACCCACGGGATCGGTaGTCTGACGACTTGCCTGCCTGGTCTACTCGGATC +
Preference number: 4 (lower is better)
Translates to: PPAEPPRYPRDR*SDDLPAWSTRI
Trigger: GATCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTACCGTGGTGGCTCTGCCGGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
CDS-3UTR TCA 90 bp AATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTTGCCATGGCGGCCACTaGGTCGGGCAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: NPTFTGLHIVVGKDWPPRCHGGH*VGQVPD
Trigger: GTCAGGGACCTGCCCGACTCAGTGGCCGCCATGGCA...ACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR TCA 90 bp ACTGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTTGCCATGGCGGCCACTaGGTCGGGCAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: TVSVGPARAPVTVATTLTCHGGH*VGQVPD
Trigger: GTCAGGGACCTGCCCGACTCAGTGGCCGCCATGGCA...AGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000591376.5
ENST00000593048.5
CDS-3UTR TCA 90 bp GACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGACGCAGGGGCTGGGACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: DVCTSTVGRTAQMDAGAGTGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...CCCAGCCCCTGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320936.9
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
CDS-3UTR TCA 90 bp AGCTTCACCCCAGAGGCCAGACCAGGGCGCGGCCTGCGGCCGGGGAGCAACCACCGGTCAGGCTGGGTTTaGCAAGATCAGAACCGAAAT +
Preference number: 4 (lower is better)
Translates to: SFTPEARPGRGLRPGSNHRSGWV*QDQNRN
Trigger: ATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCG...GTGGTTGCTCCCCGGCCGCAGGCCGCGCCCTGGTCTGGCCTCTGGGGTGAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp CTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGAACCGGCTGGCCGTCTaGGGTCGCCCTGGGATGCCA +
Preference number: 4 (lower is better)
Translates to: LPPALVPGEVPPGTVTPENRLAV*GRPGMP
Trigger: TGGCATCCCAGGGCGACCTCAGACGGCCAGCCGGTT...CTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp CAGCGCCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 4 (lower is better)
Translates to: QRHMPLFPKALTGDKPPGRDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...CCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR TCA 90 bp CCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTCTCCCCGCTTCCACTaGGTCGGGCAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: PKALTGDKPPGQAAASSSSPRFH*VGQVPD
Trigger: GTCAGGGACCTGCCCGACTCAGTGGAAGCGGGGAGA...AGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586773.5
CDS-3UTR TCA 90 bp GCCACCACTCTGACTCCGGCTGCTATAGTAGTCTCTGGAGCCTCCGTAGCCCCCTCTCCCCGCTTCCACTaGGTCGGGCAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: ATTLTPAAIVVSGASVAPSPRFH*VGQVPD
Trigger: GTCAGGGACCTGCCCGACTCAGTGGAAGCGGGGAGA...GGGGGCTACGGAGGCTCCAGAGACTACTATAGCAGCCGGAGTCAGAGTGGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592412.5
CDS-3UTR GCA 90 bp GGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAACCTGCTCCAGCGACTaGTCATTGGTGTCAAAACTC +
Preference number: 4 (lower is better)
Translates to: GRPVSCRRTAARAPGETRTCSSD*SLVSKL
Trigger: GAGTTTTGACACCAATGAGCAGTCGCTGGAGCAGGT...TCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR GCA 90 bp CCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCACCTGCTCCAGCGACTaGTCATTGGTGTCAAAACTC +
Preference number: 4 (lower is better)
Translates to: PRKLPAHRSPCSRRDSRPTCSSD*SLVSKL
Trigger: GAGTTTTGACACCAATGAGCAGTCGCTGGAGCAGGT...GGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR GCA 90 bp GGGCTGGGGCTCCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTAGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGA +
Preference number: 4 (lower is better)
Translates to: GLGLQGSCCHTRRGPTTLGCLTT*LPGLLG
Trigger: TCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACC...TAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320936.9
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
CDS-3UTR GCA 90 bp TTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGCTCCAGGGCAGTTGCTaGCACACCCGCCGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LLPHPPGSYHTTLRNVTRLQGSC*HTRRGP
Trigger: AGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAG...CCGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp AGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGGCTCCAGGGCAGTTaGTGCCACACCCGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: SCCHTRRGPTTLHSETSHGLQGS*CHTRRG
Trigger: ACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCC...GTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp GCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: ASGDKPPGQAAASSSCSRSWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...CCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR GCA 90 bp CTGCACCCAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGATCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: LHPTHTERRPPWGHRCGRSWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...TCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR GCA 90 bp GACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGACGCAGGGGCTGGGTCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: DVCTSTVGRTAQMDAGAGSWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...CCCAGCCCCTGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp GGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGGAGTGTGTGGTGCAATaGAAGGGAATTGTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: GKDWPPRKLPAHRSPCSRECVVQ*KGIVRA
Trigger: TGCTCTGACAATTCCCTTGCATTGCACCACACACTC...CCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp CATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCCAGGGCGGGTCTaGACCTTGGCGCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: HATLPESTYRGQASWASGCPGRV*TLAQLE
Trigger: CTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCA...GCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587896.6
CDS-3UTR GCA 90 bp CAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAGCAGGACGGGCTCAGCGCCACATaGCACTCTTCCCGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: QHTPKGARHGAIGAGEQDGLSAT*HSSRKH
Trigger: GTGCTTTCGGGAAGAGTGGCATGTGGCGCTGAGCCC...GTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR GCA 90 bp CGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAACTGAAACGCCCAGGTaGCGCCCGGGACAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: RLPPALVPGEVPPGTVTPTETPR*RPGQGS
Trigger: TGAGCCCTGTCCCGGGCGGCACCTGGGCGTTTCAGT...TGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR GCA 90 bp CGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCACTGAAACGCCCAGGTaGCGCCCGGGACAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: RIRLSQGSTSLWARTGRPTETPR*RPGQGS
Trigger: TGAGCCCTGTCCCGGGCGGCACCTGGGCGTTTCAGT...GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR GCA 90 bp TTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGGCTCCCGGGAGGCGCTaGCCTGCACCCAACACACAC +
Preference number: 4 (lower is better)
Translates to: LLPHPPGSYHTTLRNVTRAPGRR*PAPNTH
Trigger: GTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGC...CCGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587896.6
CDS-3UTR CCA 90 bp CCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTCATCGCTGCTCTCAGGCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: PGEVPPGTVTPEVIAALRRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...CCTGAGAGCAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
ENST00000592234.5
CDS-3UTR CCA 90 bp CAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: QASWASGCLQLLFQVKSLRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
ENST00000592234.5
CDS-3UTR CCA 90 bp CGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACCTCAGAGGGTTCTGTTaGGCGCACAACACTTCTGTC +
Preference number: 4 (lower is better)
Translates to: RTAARAPGETRGPEPAPHLRGFC*AHNTSV
Trigger: GACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAG...GTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
ENST00000592234.5
CDS-3UTR CCA 90 bp CTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LTGDKPPGQAAASSSCSRRGQAS*ASGCLQ
Trigger: CTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT...CCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000585914.5
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
CDS-3UTR CCA 90 bp GGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GQASWASGCLQLLFQVKSRGQAS*ASGCLQ
Trigger: CTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT...GGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
ENST00000592234.5
CDS-3UTR CCA 90 bp TCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGAGTTGTGGGCAAGGACTaGCCGCCCCGTAAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SWASGCLQLLFQVKSLLGVVGKD*PPRKLP
Trigger: CGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAAC...TCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp TCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTGTTGTGGGCAAGGACTaGCCGCCCCGTAAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SRKHLQGTSLLGKRLPPAVVGKD*PPRKLP
Trigger: CGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAAC...AGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp CGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGTTGTGGGCAAGGACTaGCCGCCCCGTAAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: RLPPALVPGEVPPGTVTPVVGKD*PPRKLP
Trigger: CGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAAC...TGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp CAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCGTTGTGGGCAAGGACTaGCCGCCCCGTAAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: QASWASGCLQLLFQVKSLVVGKD*PPRKLP
Trigger: CGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAAC...GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp TCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCTG +
Preference number: 4 (lower is better)
Translates to: SNPTFTGLHIVVGKDWPPPFPES*PGPFNL
Trigger: CAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGG...GGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp CCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCGAAAGGCGCCCGCCATaGGGCCATAGGTGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: PLFPKALTGDKPPGQAAAERRPP*GHRCGR
Trigger: TCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTC...GGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp AGCCACCACTCTGACTCCGGCTGCTATAGTAGTCTCTGGAGCCTCCGTAGCCCCCCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCGT +
Preference number: 4 (lower is better)
Translates to: SHHSDSGCYSSLWSLRSPPFPES*PGPFNR
Trigger: ACGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGG...GGGGCTACGGAGGCTCCAGAGACTACTATAGCAGCCGGAGTCAGAGTGGTGGCT
64% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000591376.5
CDS-3UTR CCA 90 bp TGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCGT +
Preference number: 4 (lower is better)
Translates to: CHSSRKHLQGTSLLGKRLPFPES*PGPFNR
Trigger: ACGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGG...CAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000589235.5
ENST00000591935.5
CDS-3UTR TCA 90 bp CTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTCGATCTGTCCGTACTTTaGGAAGACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: LEALSPHLTGEAPQGTSLDLSVL*EDLLQR
Trigger: TCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATC...GAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR TCA 90 bp CCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAGCAGGACTCACTGAAAACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: PKGARHGAIGAGEQDSLKTGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...TTTCAGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR TCA 90 bp CTAGCTGACTGCCCAGCGGGCCCTCGCTCTCCCTTGCCTTTTTGGTCAGTCTCAGAGAGGGCACCAAGGTaGACCGAGCTCCCACCGCAG +
Preference number: 4 (lower is better)
Translates to: LADCPAGPRSPLPFWSVSERAPR*TELPPQ
Trigger: CTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTCTC...TGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGCCCGCTGGGCAGTCAGCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp CACCAAGGTGAACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGACACAGTGACAAGGTCTaGGTGTCCAGCCTAAAGTGC +
Preference number: 4 (lower is better)
Translates to: HQGEPSSHRRPQQRGALGHSDKV*VSSLKC
Trigger: GCACTTTAGGCTGGACACTCAGACCTTGTCACTGTG...TCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp GGCACCGAAGCAACAAGAGGCAGCTTCACCCCAGAGGCCAGACCAGGGCGCGGCTCTGGGCAAGCACAGTaGCAAGGTCTGAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: GTEATRGSFTPEARPGRGSGQAQ*QGLSVQ
Trigger: CTGGACACTCAGACCTTGTCACTGTGCTTGCCCAGA...GCCGCGCCCTGGTCTGGCCTCTGGGGTGAAGCTGCCTCTTGTTGCTTCGGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp ATAACTGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGAACCGGCTGGCCGTCTaGGGTCGCCCTGGGATGCCA +
Preference number: 4 (lower is better)
Translates to: ITVSVGPARAPVTVATTLNRLAV*GRPGMP
Trigger: TGGCATCCCAGGGCGACCTCAGACGGCCAGCCGGTT...CAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACAGTTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR TCA 90 bp GCCACCACTCTGACTCCGGCTGCTATAGTAGTCTCTGGAGCCTCCGTAGCCCCCTCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: ATTLTPAAIVVSGASVAPSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...GGGGGCTACGGAGGCTCCAGAGACTACTATAGCAGCCGGAGTCAGAGTGGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000591376.5
CDS-3UTR TCA 90 bp TCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGATCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: SWASGCLQLLFQVKSLLGSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...TCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
ENST00000592234.5
CDS-3UTR TCA 90 bp CACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 4 (lower is better)
Translates to: HLTGEAPQGTSLLGKRLPSSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...AGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000586636.5
ENST00000587169.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR TCA 90 bp TCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 4 (lower is better)
Translates to: STSLWARTGRPVSCRRTASSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...TGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR TCA 90 bp GCTCCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAGGCCTGCTTCTAGACTaGGGCAGTCCAGGTCAGCGT +
Preference number: 4 (lower is better)
Translates to: APGQLLPHPPGSYHTTLRGLLLD*GSPGQR
Trigger: ACGCTGACCTGGACTGCCTCAGTCTAGAAGCAGGCC...TCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp CAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCTCTATGAGCCAGGCATaGCTGGGCCCAGGCTGCACC +
Preference number: 4 (lower is better)
Translates to: QASWASGCLQLLFQVKSLSMSQA*LGPGCT
Trigger: GGTGCAGCCTGGGCCCAGTCATGCCTGGCTCATAGA...GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp CAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCAAGGGATTTCATCTATaGGCCAGGCATGACTGGGCC +
Preference number: 4 (lower is better)
Translates to: QGSTSLWARTGRPVSCRRKGFHL*ARHDWA
Trigger: GGCCCAGTCATGCCTGGCTCATAGATGAAATCCCTT...GCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp TCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGAGAGCAGGACTCACTaGAACGCCCAGGTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: SSRKHLQGTSLLGKRLPPESRTH*NAQVPP
Trigger: GGGCGGCACCTGGGCGTTTCAGTGAGTCCTGCTCTC...TGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR TCA 90 bp GGGGCTCCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAAGTTTGCCTTCATCTaGTGCCATGGCGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: GAPGQLLPHPPGSYHTTLKFAFI*CHGGLW
Trigger: CCACAGGCCGCCATGGCATCAGATGAAGGCAAACTT...GAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589710.5
CDS-3UTR TCA 90 bp AGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGGTCTGCGAGCACCCGTaGCTCCCAGGTATCTCACCG +
Preference number: 4 (lower is better)
Translates to: RGQASWASGCLQLLFQVKVCEHP*LPGISP
Trigger: CGGTGAGATACCTGGGAGTCACGGGTGCTCGCAGAC...CTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591935.5
CDS-3UTR GCA 90 bp GCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGATACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: ARTGRPVSCRRTAARAPGYFEKT*SSDCSL
Trigger: CAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTA...TCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR GCA 90 bp GGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCTACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: GAPQPVLQERLEALSPHLYFEKT*SSDCSL
Trigger: CAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTA...GAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR GCA 90 bp AGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCTACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: SCRRTAARAPGETRGPEPYFEKT*SSDCSL
Trigger: CAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTA...GGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR GCA 90 bp ATAACTGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGCTCCAGGGCAGTTGCTaGCACACCCGCCGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: ITVSVGPARAPVTVATTLLQGSC*HTRRGP
Trigger: AGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAG...CAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACAGTTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp CAGGCGGGGGACCCGGCGCTCCCGGGAGGCGCTGCCCTGCACCCAACACACACCGAATTCCTCAGCCACTaGAAATACAACATCGATGGA +
Preference number: 4 (lower is better)
Translates to: QAGDPALPGGAALHPTHTEFLSH*KYNIDG
Trigger: TCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTC...GGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGCGCCGGGTCCCCCGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587896.6
CDS-3UTR GCA 90 bp GGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGATGCACCTAGCTGACTaGCCAGCGGGCCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: GKRLPPALVPGEVPPGTVMHLAD*PAGPRS
Trigger: AGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCAT...CACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp CTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCTTGATGCCACGTGCCTCTaGTCTCTGGCCTGCTTCGTA +
Preference number: 4 (lower is better)
Translates to: LQERLEALSPHLTGEAPLDATCL*SLACFV
Trigger: TACGAAGCAGGCCAGAGAGCAGAGGCACGTGGCATC...AAGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585914.5
CDS-3UTR GCA 90 bp TTGCGTCTCAGAGGGTTCTGTTGGGCGCACAACACTTCTGTCCTCCGAGGGCTGGCGCACCGCAGCCCGTaGTCCAGGAGAGACTCGAGG +
Preference number: 4 (lower is better)
Translates to: LRLRGFCWAHNTSVLRGLAHRSP*SRRDSR
Trigger: CCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGC...CAGCCCTCGGAGGACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGACGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp AACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTGACTTAGGCTTGCAGACCCGCTaGTTCTCCACCTTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: NRAPTAGHSSVAPSECDLGLQTR*FSTFSL
Trigger: GAGAGAGAAGGTGGAGAAGCAGCGGGTCTGCAAGCC...TAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp TGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGCCCCAGGGAAGGCTTaGAGACCCGCTGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: CLCRTRPSSGHCSHHSDSAPGKA*RPAASP
Trigger: TGGAGAAGCAGCGGGTCTGCAAGCCTTCCCTGGGGC...GGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp TTGCGTCTCAGAGGGTTCTGTTGGGCGCACAACACTTCTGTCCTCCGAGGGCTGTGCCCAGGGCGGGTCTaGACCTTGGCGCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LRLRGFCWAHNTSVLRGLCPGRV*TLAQLE
Trigger: CTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCA...CAGCCCTCGGAGGACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGACGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp CTTGCGTCTCAGAGGGTTCTGTTGGGCGCACAACACTTCTGTCCTCCGAGGGCTCGTCACAGGCCAGCATaGCCAGGGCGGGTCTGCACC +
Preference number: 4 (lower is better)
Translates to: LASQRVLLGAQHFCPPRARHRPA*PGRVCT
Trigger: GGTGCAGACCCGCCCTGGGCATGCTGGCCTGTGACG...AGCCCTCGGAGGACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGACGCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp CTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGCCATGGGGCCATAGGTaGGGGAGAGCAGGACTCACT +
Preference number: 4 (lower is better)
Translates to: LLGKRLPPALVPGEVPPGPWGHR*GRAGLT
Trigger: AGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGG...CCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR GCA 90 bp GTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTCATCGCTGCTCTCTGCCATGGCGGCCTGTaGCTCTGGGGTCAGCTGCGT +
Preference number: 4 (lower is better)
Translates to: VPGEVPPGTVTPEVIAALCHGGL*LWGQLR
Trigger: ACGCAGCTGACCCCAGAGGCACAGGCCGCCATGGCA...GAGAGCAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591935.5
CDS-3UTR GCA 90 bp AACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTGACTTACGTCTACTTCTGCTCTaGCACAACAGGCTGAGCCGC +
Preference number: 4 (lower is better)
Translates to: NRAPTAGHSSVAPSECDLRLLLL*HNRLSR
Trigger: GCGGCTCAGCCTGTTGTGGCAGAGCAGAAGTAGACG...TAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591097.5
CDS-3UTR CCA 90 bp CAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCCCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: QGSTSLWARTGRPVSCRRPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...GCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR CCA 90 bp ACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAGCAGGACTCACTGGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: TPKGARHGAIGAGEQDSLDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...CAGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp TGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: CRTRPSSGHCSHHSDSGCDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...GCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591097.5
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR CCA 90 bp CGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCTATAGTAGTCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: RPSSGHCSHHSDSGCYSSRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...ACTACTATAGCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR CCA 90 bp AACTGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: NCLCRTRPSSGHCSHHSDRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...GTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACAGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR CCA 90 bp GAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTGACTTACCGTTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: ELPPQATAAWRPRSVTYRCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...ACGGTAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CCA 90 bp GACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGACGCAGGGGCTGGGTCTGCACGTCTACTGTaGGGCGCACAGCACAGATGG +
Preference number: 4 (lower is better)
Translates to: DVCTSTVGRTAQMDAGAGSARLL*GAQHRW
Trigger: CCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGA...CCCAGCCCCTGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp GGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACAGGCCACAGCAGCGTaGCGCCCTCGGAGTGTGACT +
Preference number: 4 (lower is better)
Translates to: GSCCHTRRGPTTLHSETSQATAA*RPRSVT
Trigger: AGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTG...TGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp TTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGCAGGCCACAGCAGCGTaGCGCCCTCGGAGTGTGACT +
Preference number: 4 (lower is better)
Translates to: LLPHPPGSYHTTLRNVTRQATAA*RPRSVT
Trigger: AGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTG...CCGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp GGCGAAGCGCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTCAGATGCGCCTCTTCTaGGCAAGCACAGTGACAAGG +
Preference number: 4 (lower is better)
Translates to: GEAPQGTSLLGKRLPPALQMRLF*ASTVTR
Trigger: CCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTG...AAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR CCA 90 bp CACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCTCAGAGGGTTCTGTTaGGCGCACAACACTTCTGTC +
Preference number: 4 (lower is better)
Translates to: HIVVGKDWPPRKLPAHRSLRGFC*AHNTSV
Trigger: GACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAG...GCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
ENST00000592234.5
CDS-3UTR CCA 90 bp AATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: NPTFTGLHIVVGKDWPPRRGQAS*ASGCLQ
Trigger: CTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT...ACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp CTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTTGTGGGCAAGGACTaGCCGCCCCGTAAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: LPPALVPGEVPPGTVTPEVVGKD*PPRKLP
Trigger: CGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAAC...CTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp GTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTCATCGCTGCTCTCGGCTCCACATCGTTGTaGGCAAGGACTGGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: VPGEVPPGTVTPEVIAALGSTSL*ARTGRP
Trigger: GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCC...GAGAGCAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp CCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTCACAGTCCAGCCCTCTaGCCACCACTGCCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: PKALTGDKPPGQAAASSSHSPAL*PPLPEA
Trigger: GGCTTCTGGCAGTGGTGGCCAGAGGGCTGGACTGTG...AGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587896.6
CDS-3UTR CCA 90 bp CTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTCCTGGGCAAGGCTACCCGTATGGGATaGAGCTATGTGGGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: LSPHLTGEAPQGTSLLGKATRMG*SYVGQC
Trigger: ACACTGGCCCACATAGCTCCATCCCATACGGGTAGC...CTTGCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR CCA 90 bp GCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACGAGCCCGCACCTCACTaGCGAAGCGCCTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: AVAATPAGVLPHYTQKRHEPAPH*RSASWK
Trigger: CTTCCAGGAGGCGCTTCGCCAGTGAGGTGCGGGCTC...GTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587896.6
CDS-3UTR CCA 90 bp CCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTCATCGGCGGCCTGTGCCTCTaGGGTCAGCTGCGTCTGCGA +
Preference number: 4 (lower is better)
Translates to: PALVPGEVPPGTVTPEVIGGLCL*GQLRLR
Trigger: TCGCAGACGCAGCTGACCCCAGAGGCACAGGCCGCC...GATGACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591935.5
CDS-3UTR CCA 90 bp ACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCCCTTCCCCGAGTCCTaGCCGGGCCCCTTCAACCGT +
Preference number: 4 (lower is better)
Translates to: TCHSSRKHLQGTSLLGKRPFPES*PGPFNR
Trigger: ACGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGG...CCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000589235.5
ENST00000591935.5
CDS-3UTR TCA 90 bp CTTGCGTCTCAGAGGGTTCTGTTGGGCGCACAACACTTCTGTCCTCCGAGGGCTAGTCGGGCAGGTCCCTaGCGCAAGCGGGAAGACAGC +
Preference number: 4 (lower is better)
Translates to: LASQRVLLGAQHFCPPRASRAGP*RKREDS
Trigger: GCTGTCTTCCCGCTTGCGTCAGGGACCTGCCCGACT...AGCCCTCGGAGGACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGACGCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp AGGGAGCAGCTTGCGTCTCAGAGGGTTCTGTTGGGCGCACAACACTTCTGTCCTTGCCATGGCGGCCACTaGGTCGGGCAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: REQLASQRVLLGAQHFCPCHGGH*VGQVPD
Trigger: GTCAGGGACCTGCCCGACTCAGTGGCCGCCATGGCA...AGGACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGACGCAAGCTGCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp CCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTCATCGCTGCTCTCAGGACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: PGEVPPGTVTPEVIAALRTGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...CCTGAGAGCAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
ENST00000591935.5
CDS-3UTR TCA 90 bp GGCGAAGCGCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTTCGATCTCAGAGAAGTaGGTGGGGCACCCACTTCAT +
Preference number: 4 (lower is better)
Translates to: GEAPQGTSLLGKRLPPALSISEK*VGHPLH
Trigger: ATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGA...AAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR TCA 90 bp GGTACCCACGGGATCGGTTGTCTGACGACTTGCCTGCCTGGTCTACTCGGATCTGAGAGGGCACCAAGGTaGACCGAGCTCCCACCGCAG +
Preference number: 4 (lower is better)
Translates to: GTHGIGCLTTCLPGLLGSERAPR*TELPPQ
Trigger: CTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTCTC...AGATCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
CDS-3UTR TCA 90 bp TGGCGAAGCGCCTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTCACAGTGACAAGGTCTaGGTGTCCAGCCTAAAGTGC +
Preference number: 4 (lower is better)
Translates to: WRSASGDKPPGQAAASSSHSDKV*VSSLKC
Trigger: GCACTTTAGGCTGGACACTCAGACCTTGTCACTGTG...AGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAGGCGCTTCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR TCA 90 bp CAGCGCCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGTCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: QRHMPLFPKALTGDKPPGSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...CCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
CDS-3UTR TCA 90 bp CTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCTTAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 4 (lower is better)
Translates to: LQERLEALSPHLTGEAPLSSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...AAGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585914.5
CDS-3UTR TCA 90 bp CTGCACCCAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 4 (lower is better)
Translates to: LHPTHTERRPPWGHRCGRSSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...TCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR TCA 90 bp AAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGCACATGACTTTCAGTaGGCTCTCAACAAGAGGGAT +
Preference number: 4 (lower is better)
Translates to: KDWPPRKLPAHRSPCSRRAHDFQ*ALNKRD
Trigger: ATCCCTCTTGTTGAGAGCTCACTGAAAGTCATGTGC...TCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp AGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTTCTATGAGCCAGGCATaGCTGGGCCCAGGCTGCACC +
Preference number: 4 (lower is better)
Translates to: RAVAATPAGVLPHYTQKRSMSQA*LGPGCT
Trigger: GGTGCAGCCTGGGCCCAGTCATGCCTGGCTCATAGA...ACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp CAGCGCCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCTAGTCAGGGGGCTGTaGCCTCAGGCTCCGTCACAG +
Preference number: 4 (lower is better)
Translates to: QRHMPLFPKALTGDKPPGLVRGL*PQAPSQ
Trigger: CTGTGACGGAGCCTGAGGTCACAGCCCCCTGACTAG...CCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGCGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587896.6
CDS-3UTR GCA 90 bp GCTCCCGGGAGGCGCTGCCCTGCACCCAACACACACCGAAAGGCGCCCGCCATGTACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: APGRRCPAPNTHRKAPAMYFEKT*SSDCSL
Trigger: CAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTA...CATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR GCA 90 bp GGCACCAAGGTGAACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGTACTTTGAGAAGACCTaGTCCAGCGACTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: GTKVNRAPTAGHSSVAPSYFEKT*SSDCSL
Trigger: CAATGAGCAGTCGCTGGAGCAGGTCTTCTCAAAGTA...CGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTTGGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR GCA 90 bp GGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: GSCCHTRRGPTTLHSETSPLRDV*TSTVGR
Trigger: GCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG...TGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp GTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGCCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: VAATPAGVLPHYTQKRHTPLRDV*TSTVGR
Trigger: GCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG...CGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp CCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGGAGTTGGCCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: PHPPGSYHTTLRNVTRSWPLRDV*TSTVGR
Trigger: GCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG...CCAACTCCGTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp GGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCTCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: GQASWASGCLQLLFQVKSSWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...GGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
ENST00000592234.5
CDS-3UTR GCA 90 bp GCCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCCCTCTGGCCACCACTaGCAGAAGCCTCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ATCHSSRKHLQGTSLLGKPSGHH*QKPPRA
Trigger: AGCCCTGGGAGGCTTCTGGCAGTGGTGGCCAGAGGG...CTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587896.6
CDS-3UTR GCA 90 bp AGGGAGCAGCTTGCGTCTCAGAGGGTTCTGTTGGGCGCACAACACTTCTGTCCTCGTCACAGGCCAGCATaGCCAGGGCGGGTCTGCACC +
Preference number: 4 (lower is better)
Translates to: REQLASQRVLLGAQHFCPRHRPA*PGRVCT
Trigger: GGTGCAGACCCGCCCTGGGCATGCTGGCCTGTGACG...AGGACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGACGCAAGCTGCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp GAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGGGGCTCAGCGCCACATaGCACTCTTCCCGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: ESDFHRAPHRCGQGLAAPGLSAT*HSSRKH
Trigger: GTGCTTTCGGGAAGAGTGGCATGTGGCGCTGAGCCC...CGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR GCA 90 bp CGCCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAACTGAAACGCCCAGGTaGCGCCCGGGACAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: RHMPLFPKALTGDKPPGQTETPR*RPGQGS
Trigger: TGAGCCCTGTCCCGGGCGGCACCTGGGCGTTTCAGT...TTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR GCA 90 bp ACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGCGGGAGGCGCTGCCCTaGACCCAACACACACCGAAA +
Preference number: 4 (lower is better)
Translates to: TYRGQASWASGCLQLLFQREALP*TQHTPK
Trigger: TTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCG...CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR GCA 90 bp GAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTGACTTACCGTTCACAACCACCACTGTaGAGGGGAGAGAGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: ELPPQATAAWRPRSVTYRSQPPL*RGERSS
Trigger: TGAAGACCTCTCTCCCCTGCACAGTGGTGGTTGTGA...ACGGTAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
CDS-3UTR CCA 90 bp GCTGCCCTGCACCCAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCCCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: AALHPTHTERRPPWGHRCPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...GCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp GAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTGACTTACCGTCCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: ELPPQATAAWRPRSVTYRPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...ACGGTAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CCA 90 bp CTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAATCCCCGAGATCTCTaGGTCTCCCTGTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: LHIVVGKDWPPRKLPAHRNPRDL*VSLSFT
Trigger: TGTGAAAGACAGGGAGACCCAGAGATCTCGGGGATT...GCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
CDS-3UTR CCA 90 bp CTCAGGCCACCCTTCCCCGAGTCCTGGCCGGGCCCCTTCAACCTCGAATTACAGGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: LRPPFPESWPGPFNLELQDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...CTGTAATTCGAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGGTGGCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585914.5
CDS-3UTR CCA 90 bp GAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAGCAGGACTCACTGAAACGGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: ERRPPWGHRCGRAGLTETDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...CGTTTCAGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp CTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCTTTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: LQERLEALSPHLTGEAPLCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...AAGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585914.5
CDS-3UTR CCA 90 bp ACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAGCAGGACTCACTGTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: TPKGARHGAIGAGEQDSLCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...CAGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp CAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAGCAGGACTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: QHTPKGARHGAIGAGEQDCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...GTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp GACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGACGCAGGGGCTGGGCAGATGCGCCTCTTCTaGGCAAGCACAGTGACAAGG +
Preference number: 4 (lower is better)
Translates to: DVCTSTVGRTAQMDAGAGQMRLF*ASTVTR
Trigger: CCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTG...CCCAGCCCCTGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp GCTCAGCGCCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: AQRHMPLFPKALTGDKPPRGQAS*ASGCLQ
Trigger: CTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT...AGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGCGCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
CDS-3UTR CCA 90 bp CTTGCGTCTCAGAGGGTTCTGTTGGGCGCACAACACTTCTGTCCTCCGAGGGCTGTTGTGGGCAAGGACTaGCCGCCCCGTAAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: LASQRVLLGAQHFCPPRAVVGKD*PPRKLP
Trigger: CGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAAC...AGCCCTCGGAGGACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGACGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp AGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACACGTTGTGGGCAAGGACTaGCCGCCCCGTAAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SCCHTRRGPTTLHSETSHVVGKD*PPRKLP
Trigger: CGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAAC...GTGTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp CCAGCATGCCCAGGGCGGGTCTGCACCTTGGCGCAGCTGGAGCCAGCTACCCGTTCAACAAGAGGGATGTaGACACGAGCGGAAGGAGTT +
Preference number: 4 (lower is better)
Translates to: PACPGRVCTLAQLEPATRSTRGM*TRAEGV
Trigger: AACTCCTTCCGCTCGTGTCCACATCCCTCTTGTTGA...ACGGGTAGCTGGCTCCAGCTGCGCCAAGGTGCAGACCCGCCCTGGGCATGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp CCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTCATCGAAAGGCGCCCGCCATaGGGCCATAGGTGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: PALVPGEVPPGTVTPEVIERRPP*GHRCGR
Trigger: TCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTC...GATGACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp CACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCTTCTGGGTGCACACGTaGCCCTTTATTCGAATCCGA +
Preference number: 4 (lower is better)
Translates to: HIVVGKDWPPRKLPAHRSFWVHT*PFIRIR
Trigger: TCGGATTCGAATAAAGGGCCACGTGTGCACCCAGAA...GCTGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp ACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGTTCTGGGTGCACACGTaGCCCTTTATTCGAATCCGA +
Preference number: 4 (lower is better)
Translates to: TAARAPGETRGPEPAPHWFWVHT*PFIRIR
Trigger: TCGGATTCGAATAAAGGGCCACGTGTGCACCCAGAA...CCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp CAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGTGGCTGGGGAGAGCTaGTGGTCGCGTCTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: QEPLRDVCTSTVGRTAQMVAGES*WSRLPH
Trigger: ATGGGGGAGACGCGACCACCAGCTCTCCCCAGCCAC...CATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588030.5
CDS-3UTR CCA 90 bp ATCTTCAAGAACCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACCCCGACTCCTGTGGCTaGGGAGAGCTGGTGGTCGCG +
Preference number: 4 (lower is better)
Translates to: IFKNLSGTSARLLWGAQHPDSCG*GELVVA
Trigger: CGCGACCACCAGCTCTCCCCAGCCACAGGAGTCGGG...GTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGGTTCTTGAAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588030.5
CDS-3UTR CCA 90 bp CCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCCTTCATCTGATGCCATaGCGGCCTGTGCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: PLFPKALTGDKPPGQAAALHLMP*RPVPLG
Trigger: CCCCAGAGGCACAGGCCGCCATGGCATCAGATGAAG...GGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591935.5
CDS-3UTR TCA 90 bp AGAGGACAGATGCGCCTCTTCTGGGCAAGCACAGTGACAAGGTCTGAGTGTCCATGCCATGGCGGCCACTaGGTCGGGCAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: RGQMRLFWASTVTRSECPCHGGH*VGQVPD
Trigger: GTCAGGGACCTGCCCGACTCAGTGGCCGCCATGGCA...TGGACACTCAGACCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTGTCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp GGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCAACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: GSCCHTRRGPTTLHSETSTGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...TGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320936.9
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
CDS-3UTR TCA 90 bp CTAGCTGACTGCCCAGCGGGCCCTCGCTCTCCCTTGCCTTTTTGGTCAGTCTCAACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LADCPAGPRSPLPFWSVSTGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...TGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGCCCGCTGGGCAGTCAGCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000591097.5
CDS-3UTR TCA 90 bp CTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LPPALVPGEVPPGTVTPETGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...CTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
ENST00000591935.5
CDS-3UTR TCA 90 bp CGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCTATAGTAGTACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: RPSSGHCSHHSDSGCYSSTGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...ACTACTATAGCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR TCA 90 bp CCAGGGACCTGGGACCCGGGACGGAAGCTGGCCATCCCGCAACCACCCCTGTGCTTGGAAGGACGATCTTaGGCAGGAAGGGTTTTTACT +
Preference number: 4 (lower is better)
Translates to: PGTWDPGRKLAIPQPPLCLEGRS*AGRVFT
Trigger: AGTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAA...GCACAGGGGTGGTTGCGGGATGGCCAGCTTCCGTCCCGGGTCCCAGGTCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591097.5
CDS-3UTR TCA 90 bp TGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCAAGATCAGAACCGAAATaGCTACGAAAGTGGGAATAC +
Preference number: 4 (lower is better)
Translates to: CRRTAARAPGETRGPEPARSEPK*LRKWEY
Trigger: GTATTCCCACTTTCGTAGTCATTTCGGTTCTGATCT...TGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp AGGTGCACGTCCACTGTCCCTGCTAAGCTGCCCGCACAGTCCAGCCCTCTGGCCTCGATCTCAGAGAAGTaGGTGGGGCACCCACTTCAT +
Preference number: 4 (lower is better)
Translates to: RCTSTVPAKLPAQSSPLASISEK*VGHPLH
Trigger: ATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGA...GGCCAGAGGGCTGGACTGTGCGGGCAGCTTAGCAGGGACAGTGGACGTGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp ACCGAAGCAACAAGAGGCAGCTTCACCCCAGAGGCCAGACCAGGGCGCGGCCTGCACAGTGACAAGGTCTaGGTGTCCAGCCTAAAGTGC +
Preference number: 4 (lower is better)
Translates to: TEATRGSFTPEARPGRGLHSDKV*VSSLKC
Trigger: GCACTTTAGGCTGGACACTCAGACCTTGTCACTGTG...CAGGCCGCGCCCTGGTCTGGCCTCTGGGGTGAAGCTGCCTCTTGTTGCTTCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp CGCAGCTGGAGCCAGCTACCCGTATGGGATGGAGCTATGTGGGCCAGTGTGGGCTCTGGGCAAGCACAGTaGCAAGGTCTGAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: RSWSQLPVWDGAMWASVGSGQAQ*QGLSVQ
Trigger: CTGGACACTCAGACCTTGTCACTGTGCTTGCCCAGA...GCCCACACTGGCCCACATAGCTCCATCCCATACGGGTAGCTGGCTCCAGCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp CTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCTTGGCTATTTCCACATATaGGCTAGCCAAGGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LQERLEALSPHLTGEAPLGYFHI*ASQGSS
Trigger: GCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGCC...AAGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585914.5
CDS-3UTR TCA 90 bp TTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCTCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: FESDFHRAPHRCGQGLAASLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...GGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR TCA 90 bp GTCATAACTGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTAGTCAGGGGGCTGTaGCCTCAGGCTCCGTCACAG +
Preference number: 4 (lower is better)
Translates to: VITVSVGPARAPVTVATTLVRGL*PQAPSQ
Trigger: CTGTGACGGAGCCTGAGGTCACAGCCCCCTGACTAG...AGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACAGTTATGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp ACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCAGGGGACAAGCCTTGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 4 (lower is better)
Translates to: TRGPEPAPHWRSASGDKPWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...AGGCTTGTCCCCTGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586636.5
ENST00000587169.5
ENST00000591376.5
CDS-3UTR GCA 90 bp TCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCATGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 4 (lower is better)
Translates to: STSLWARTGRPVSCRRTAWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...TGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
CDS-3UTR GCA 90 bp CTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGA +
Preference number: 4 (lower is better)
Translates to: LLGKRLPPALVPGEVPPGGCLTT*LPGLLG
Trigger: TCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACC...CCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
ENST00000591935.5
CDS-3UTR GCA 90 bp CGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCCTGTCCTCCGAGGGCTaGAGCTTCCATAGGCTAGCA +
Preference number: 4 (lower is better)
Translates to: RIRLSQGSTSLWARTGRPLSSEG*SFHRLA
Trigger: TGCTAGCCTATGGAAGCTGCAGCCCTCGGAGGACAG...GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000444172.6
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp CACCTAGCTGACTGCCCAGCGGGCCCTCGCTCTCCCTTGCCTTTTTGGTCAGTCCTGTCCTCCGAGGGCTaGAGCTTCCATAGGCTAGCA +
Preference number: 4 (lower is better)
Translates to: HLADCPAGPRSPLPFWSVLSSEG*SFHRLA
Trigger: TGCTAGCCTATGGAAGCTGCAGCCCTCGGAGGACAG...GACTGACCAAAAAGGCAAGGGAGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp TATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGGCGCACCGCAGCCCGTaGTCCAGGAGAGACTCGAGG +
Preference number: 4 (lower is better)
Translates to: YSNPTFTGLHIVVGKDWPAHRSP*SRRDSR
Trigger: CCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGC...CGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR GCA 90 bp CCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGGCTTGCAGACCCGCTaGTTCTCCACCTTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: PGQLLPHPPGSYHTTLRNGLQTR*FSTFSL
Trigger: GAGAGAGAAGGTGGAGAAGCAGCGGGTCTGCAAGCC...GTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp AGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGGGCTTGCAGACCCGCTaGTTCTCCACCTTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: RGQASWASGCLQLLFQVKGLQTR*FSTFSL
Trigger: GAGAGAGAAGGTGGAGAAGCAGCGGGTCTGCAAGCC...CTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp CTTGCGTCTCAGAGGGTTCTGTTGGGCGCACAACACTTCTGTCCTCCGAGGGCTGCCCCAGGGAAGGCTTaGAGACCCGCTGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LASQRVLLGAQHFCPPRAAPGKA*RPAASP
Trigger: TGGAGAAGCAGCGGGTCTGCAAGCCTTCCCTGGGGC...AGCCCTCGGAGGACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGACGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp AGTGTAAAGGCACCGAAGCAACAAGAGGCAGCTTCACCCCAGAGGCCAGACCAGCCCTCTGGCCACCACTaGCAGAAGCCTCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SVKAPKQQEAASPQRPDQPSGHH*QKPPRA
Trigger: AGCCCTGGGAGGCTTCTGGCAGTGGTGGCCAGAGGG...CTGGTCTGGCCTCTGGGGTGAAGCTGCCTCTTGTTGCTTCGGTGCCTTTACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp CTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTCATCGCTGCTCTGTCCCTGCTAAGCTaGCCGCACAGTCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LVPGEVPPGTVTPEVIAALSLLS*PHSPAL
Trigger: GAGGGCTGGACTGTGCGGGCAGCTTAGCAGGGACAG...AGCAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp CCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTCGGGCTCAGCGCCACATaGCACTCTTCCCGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: PPALVPGEVPPGTVTPEVGLSAT*HSSRKH
Trigger: GTGCTTTCGGGAAGAGTGGCATGTGGCGCTGAGCCC...GACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
CDS-3UTR GCA 90 bp GGGACAGGGCTCAGCGCCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACACCATGGGGCCATAGGTaGGGGAGAGCAGGACTCACT +
Preference number: 4 (lower is better)
Translates to: GTGLSATCHSSRKHLQGTPWGHR*GRAGLT
Trigger: AGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGG...TGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGCGCTGAGCCCTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR GCA 90 bp CTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCACTCGGCTTTCTGGGTaGACACGTGGCCCTTTATTC +
Preference number: 4 (lower is better)
Translates to: LCRTRPSSGHCSHHSDSGTRLSG*TRGPLF
Trigger: GAATAAAGGGCCACGTGTGCACCCAGAAAGCCGAGT...GCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591376.5
CDS-3UTR CCA 90 bp AACGAGGCCATCCCGGCGTCAGAAGCGGTCAGGCTGGGTTTGACAAGATCAGAACGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: NEAIPASEAVRLGLTRSERSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...TTCTGATCTTGTCAAACCCAGCCTGACCGCTTCTGACGCCGGGATGGCCTCGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
ENST00000591055.5
CDS-3UTR CCA 90 bp CCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAGCAGGACTCACTGAAATGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: PKGARHGAIGAGEQDSLKCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...TTTCAGTGAGTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
CDS-3UTR CCA 90 bp GGACCCGGCGCTCCCGGGAGGCGCTGCCCTGCACCCAACACACACCGAAAGGCGCAAATACAACATCGATaGAGTATGCGTACGTCTTCC +
Preference number: 4 (lower is better)
Translates to: GPGAPGRRCPAPNTHRKAQIQHR*SMRTSS
Trigger: GGAAGACGTACGCATACTCCATCGATGTTGTATTTG...CGCCTTTCGGTGTGTGTTGGGTGCAGGGCAGCGCCTCCCGGGAGCGCCGGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587896.6
CDS-3UTR CCA 90 bp TCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCTATAGTAGTCTCTGGAGCCAGGCCACAGCAGCGTaGCGCCCTCGGAGTGTGACT +
Preference number: 4 (lower is better)
Translates to: SGHCSHHSDSGCYSSLWSQATAA*RPRSVT
Trigger: AGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTG...GCTCCAGAGACTACTATAGCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590171.1
CDS-3UTR CCA 90 bp TCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCTATAGTAGTCTCTGGAGCGGCTCCACATCGTTGTaGGCAAGGACTGGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: SGHCSHHSDSGCYSSLWSGSTSL*ARTGRP
Trigger: GGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCC...GCTCCAGAGACTACTATAGCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000591376.5
CDS-3UTR CCA 90 bp GGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACGTCCATCTACAGACTaGAGACAGAGGGCGGGACGG +
Preference number: 4 (lower is better)
Translates to: GSCCHTRRGPTTLHSETSRPSTD*RQRAGR
Trigger: CCGTCCCGCCCTCTGTCTCCAGTCTGTAGATGGACG...TGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590347.5
CDS-3UTR CCA 90 bp TTGCGTCTCAGAGGGTTCTGTTGGGCGCACAACACTTCTGTCCTCCGAGGGCTGCACAGTCCAGCCCTCTaGCCACCACTGCCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LRLRGFCWAHNTSVLRGLHSPAL*PPLPEA
Trigger: GGCTTCTGGCAGTGGTGGCCAGAGGGCTGGACTGTG...CAGCCCTCGGAGGACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAGACGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp TCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTTGGGATGGAGCTATGTaGGCCAGTGTGGGCTCTAGA +
Preference number: 4 (lower is better)
Translates to: SVGPARAPVTVATTLTPAWDGAM*ASVGSR
Trigger: TCTAGAGCCCACACTGGCCCACATAGCTCCATCCCA...AGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR CCA 90 bp GCCACCACTCTGACTCCGGCTGCTATAGTAGTCTCTGGAGCCTCCGTAGCCCCCCTTCATCTGATGCCATaGCGGCCTGTGGCAGACACC +
Preference number: 4 (lower is better)
Translates to: ATTLTPAAIVVSGASVAPLHLMP*RPVADT
Trigger: GGTGTCTGCCACAGGCCGCCATGGCATCAGATGAAG...GGGGGCTACGGAGGCTCCAGAGACTACTATAGCAGCCGGAGTCAGAGTGGTGGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000592412.5
CDS-3UTR CCA 90 bp TCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGGCGCACCGCATTCTGGGTGCACACGTaGCCCTTTATTCGAATCCGA +
Preference number: 4 (lower is better)
Translates to: STSLWARTGRPVSCRRTAFWVHT*PFIRIR
Trigger: TCGGATTCGAATAAAGGGCCACGTGTGCACCCAGAA...TGCGGTGCGCCGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp AGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTCATGGGGCCAACCCAGTCCCCGACTCCTGTaGCTGGGGAGAGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SPFDLREVSGAPTSWGQPSPRLL*LGRAGG
Trigger: ACCACCAGCTCTCCCCAGCCACAGGAGTCGGGGACT...GGGTTGGCCCCATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000588030.5
CDS-3UTR CCA 90 bp GAAATGGCTCTGAGAGGACAGATGCGCCTCTTCTGGGCAAGCACAGTGACAAGGAACCACCCCTGTGCTTaGGCCGGCCTCCCCCTCACC +
Preference number: 4 (lower is better)
Translates to: EMALRGQMRLFWASTVTRNHPCA*AGLPLT
Trigger: GGTGAGGGGGAGGCCGGCCCAAGCACAGGGGTGGTT...CCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTGTCCTCTCAGAGCCATTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591097.5
3UTR CAA 72 bp CCACCACGGTACCCACGGGATCGGTTGTCTGACGACTaGCCTGCCTGGTCTACTCGGATCTGCCGTCCATCT +
Preference number: 4 (lower is better)
Translates to: PPRYPRDRLSDD*PAWSTRICRPS
Trigger: AGATGGACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGTGGGTACCGTGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590171.1
ENST00000591097.5
CDS-3UTR TCA 90 bp GTTGGGCGCACAACACTTCTGTCCTCCGAGGGCTGCAGCTTCCATAGGCTAGCAACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: VGRTTLLSSEGCSFHRLATGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...TGCTAGCCTATGGAAGCTGCAGCCCTCGGAGGACAGAAGTGTTGTGCGCCCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000587896.6
CDS-3UTR TCA 90 bp CACCAAGGTGAACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGATTGGAAGGACGATCTTaGGCAGGAAGGGTTTTTACT +
Preference number: 4 (lower is better)
Translates to: HQGEPSSHRRPQQRGALGLEGRS*AGRVFT
Trigger: AGTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAA...TCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp GACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGACGCAGGGGCTGGGCGGTCAGGCTGGGTTTaGCAAGATCAGAACCGAAAT +
Preference number: 4 (lower is better)
Translates to: DVCTSTVGRTAQMDAGAGRSGWV*QDQNRN
Trigger: ATTTCGGTTCTGATCTTGTCAAACCCAGCCTGACCG...CCCAGCCCCTGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp CCTCTCAGGGACGTCTGCACGTCTACTGTGGGGCGCACAGCACAGATGGACGCAGGCGCCCTCGGAGTGTaGCTTACCGTAACTGTCATA +
Preference number: 4 (lower is better)
Translates to: PLRDVCTSTVGRTAQMDAGALGV*LTVTVI
Trigger: TATGACAGTTACGGTAAGTCACACTCCGAGGGCGCC...TGCGTCCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp ACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCTATAGTGGCGCCCTCGGAGTGTaGCTTACCGTAACTGTCATA +
Preference number: 4 (lower is better)
Translates to: TRPSSGHCSHHSDSGCYSGALGV*LTVTVI
Trigger: TATGACAGTTACGGTAAGTCACACTCCGAGGGCGCC...ACTATAGCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590171.1
CDS-3UTR TCA 90 bp GGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGAAACCGGCTGGCCGTCTaGGGTCGCCCTGGGATGCCA +
Preference number: 4 (lower is better)
Translates to: GPLFESDFHRAPHRCGQGNRLAV*GRPGMP
Trigger: TGGCATCCCAGGGCGACCTCAGACGGCCAGCCGGTT...TCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000444172.6
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp AGTAACGAGGCCATCCCGGCGTCAGAAGCGGTCAGGCTGGGTTTGACAAGATCATCCCTCCTGGGACAGTaGCCCCAGAGGTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: SNEAIPASEAVRLGLTRSSLLGQ*PQRSSL
Trigger: CAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGA...TGATCTTGTCAAACCCAGCCTGACCGCTTCTGACGCCGGGATGGCCTCGTTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp CGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 4 (lower is better)
Translates to: RLPPALVPGEVPPGTVTPSSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...TGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
ENST00000592234.5
CDS-3UTR TCA 90 bp CAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 4 (lower is better)
Translates to: QASWASGCLQLLFQVKSLSSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...GAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
ENST00000592234.5
CDS-3UTR TCA 90 bp GCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 4 (lower is better)
Translates to: AHVALYSNPTFTGLHIVVRDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...CACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR GCA 90 bp CTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTCTTTGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 4 (lower is better)
Translates to: LQERLEALSPHLTGEAPLWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...AAGAGGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585914.5
CDS-3UTR GCA 90 bp CTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 4 (lower is better)
Translates to: LCRTRPSSGHCSHHSDSGWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...GCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591097.5
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR GCA 90 bp TGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGA +
Preference number: 4 (lower is better)
Translates to: CLCRTRPSSGHCSHHSDSGCLTT*LPGLLG
Trigger: TCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACC...GGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591097.5
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR GCA 90 bp CCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGAGGTCATCGCTGCTCTCAGGGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGA +
Preference number: 4 (lower is better)
Translates to: PGEVPPGTVTPEVIAALRGCLTT*LPGLLG
Trigger: TCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACC...CCTGAGAGCAGCGATGACCTCTGGGGTCACTGTCCCAGGAGGGACTTCACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
ENST00000591935.5
CDS-3UTR GCA 90 bp GGCCGCCCCGTAAGCTGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGGAATACAAGGAGGTaGATTTACTACACATTAACG +
Preference number: 4 (lower is better)
Translates to: GRPVSCRRTAARAPGETRGNTRR*IYYTLT
Trigger: CGTTAATGTGTAGTAAATGCACCTCCTTGTATTCCC...TCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCAGCTTACGGGGCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp AGTGTAAAGGCACCGAAGCAACAAGAGGCAGCTTCACCCCAGAGGCCAGACCAGCCTCTCAGGGACGTCTaGACGTCTACTGTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: SVKAPKQQEAASPQRPDQPLRDV*TSTVGR
Trigger: GCGCCCCACAGTAGACGTGCAGACGTCCCTGAGAGG...CTGGTCTGGCCTCTGGGGTGAAGCTGCCTCTTGTTGCTTCGGTGCCTTTACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp TGCCGGCGCACCGCAGCCCGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCAAAAGCCAAAGAAAACTaGGTACAAGAATTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: CRRTAARAPGETRGPEPAKAKEN*VQEFLS
Trigger: GCTGAGGAATTCTTGTACGCAGTTTTCTTTGGCTTT...TGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACGGGCTGCGGTGCGCCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp AAGGTGAACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTTTGGCTTTTGCGTCCTaGGATAGAAATGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: KVNRAPTAGHSSVAPSECLAFAS*DRNGSE
Trigger: CTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAA...ACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR GCA 90 bp CGTGCCTCTGCTCTCTGGCCTGCTTCTAGACTGAGGCAGTCCAGGTCAGCGTCACTGTCCTCCGAGGGCTaGAGCTTCCATAGGCTAGCA +
Preference number: 4 (lower is better)
Translates to: RASALWPASRLRQSRSASLSSEG*SFHRLA
Trigger: TGCTAGCCTATGGAAGCTGCAGCCCTCGGAGGACAG...TGACGCTGACCTGGACTGCCTCAGTCTAGAAGCAGGCCAGAGAGCAGAGGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp GTTGGGCGCACAACACTTCTGTCCTCCGAGGGCTGCAGCTTCCATAGGCTAGCATCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: VGRTTLLSSEGCSFHRLASWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...TGCTAGCCTATGGAAGCTGCAGCCCTCGGAGGACAGAAGTGTTGTGCGCCCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp GCTCAGCGCCACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTTCCTGGGCAAGCGGCTaGCTCCAGCTCTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: AQRHMPLFPKALTGDKPPSWASG*LQLLFQ
Trigger: CTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGA...AGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGTGGCGCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
CDS-3UTR GCA 90 bp CTGAGAGGACAGATGCGCCTCTTCTGGGCAAGCACAGTGACAAGGTCTGAGTGTCCCTCTGGCCACCACTaGCAGAAGCCTCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LRGQMRLFWASTVTRSECPSGHH*QKPPRA
Trigger: AGCCCTGGGAGGCTTCTGGCAGTGGTGGCCAGAGGG...ACACTCAGACCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTGTCCTCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp TTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGCCGACTCGGCTTTCTGGGTaGACACGTGGCCCTTTATTC +
Preference number: 4 (lower is better)
Translates to: FTGLHIVVGKDWPPRKLPTRLSG*TRGPLF
Trigger: GAATAAAGGGCCACGTGTGCACCCAGAAAGCCGAGT...CGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586636.5
ENST00000591376.5
CDS-3UTR CCA 90 bp GGCCACCCTTCCCCGAGTCCTGGCCGGGCCCCTTCAACCTCGAATTACAGGGCTAATCCCCGAGATCTCTaGGTCTCCCTGTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: GHPSPSPGRAPSTSNYRANPRDL*VSLSFT
Trigger: TGTGAAAGACAGGGAGACCCAGAGATCTCGGGGATT...AGCCCTGTAATTCGAGGTTGAAGGGGCCCGGCCAGGACTCGGGGAAGGGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585914.5
CDS-3UTR CCA 90 bp AATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: NPTFTGLHIVVGKDWPPRDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...ACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000591376.5
CDS-3UTR CCA 90 bp GAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: ESDFHRAPHRCGQGLAAPCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...CGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp CCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: PLFPKALTGDKPPGQAAACYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...GGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
CDS-3UTR CCA 90 bp CTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACATGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: LGKRLPPALVPGEVPPGTCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...TGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
ENST00000592234.5
CDS-3UTR CCA 90 bp ACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTTCTGCACGTCTACTGTaGGGCGCACAGCACAGATGG +
Preference number: 4 (lower is better)
Translates to: TSLLGKRLPPALVPGEVPSARLL*GAQHRW
Trigger: CCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGA...AGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp GCTCTCTGGCCTGCTTCTAGACTGAGGCAGTCCAGGTCAGCGTCAGGTGCACGTTCTGCACGTCTACTGTaGGGCGCACAGCACAGATGG +
Preference number: 4 (lower is better)
Translates to: ALWPASRLRQSRSASGARSARLL*GAQHRW
Trigger: CCATCTGTGCTGTGCGCCCCACAGTAGACGTGCAGA...ACGTGCACCTGACGCTGACCTGGACTGCCTCAGTCTAGAAGCAGGCCAGAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp GAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTCACAGGCCACAGCAGCGTaGCGCCCTCGGAGTGTGACT +
Preference number: 4 (lower is better)
Translates to: ERIHSPFDLREVSGAPTSQATAA*RPRSVT
Trigger: AGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTG...TGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp CGTGCTCCAGGAGAGACTCGAGGCCCTGAGCCCGCACCTCACTGGCGAAGCGCCTTGGTCAGTCTCATTTaGCTTTTGCGTCCTGCGATA +
Preference number: 4 (lower is better)
Translates to: RAPGETRGPEPAPHWRSALVSLI*LLRPAI
Trigger: TATCGCAGGACGCAAAAGCCAAATGAGACTGACCAA...GGCGCTTCGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCTCCTGGAGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp GAGGGCACCAAGGTGAACCGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCTCCCTTGCCTTTTTaGTCAGTCTCATTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: EGTKVNRAPTAGHSSVAPSPLPF*SVSFGF
Trigger: AAAGCCAAATGAGACTGACCAAAAAGGCAAGGGAGA...GGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCGGTTCACCTTGGTGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CCA 90 bp CTCAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGCTCAGAGGGTTCTGTTaGGCGCACAACACTTCTGTC +
Preference number: 4 (lower is better)
Translates to: LRGQASWASGCLQLLFQVLRGFC*AHNTSV
Trigger: GACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAG...CACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000444172.6
ENST00000587169.5
ENST00000590347.5
ENST00000592234.5
CDS-3UTR CCA 90 bp TCACTGGCGAAGCGCCTCTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCTCAGAGGGTTCTGTTaGGCGCACAACACTTCTGTC +
Preference number: 4 (lower is better)
Translates to: SLAKRLLQGTSLLGKRLPLRGFC*AHNTSV
Trigger: GACAGAAGTGTTGTGCGCCCAACAGAACCCTCTGAG...AGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGAGGCGCTTCGCCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585914.5
CDS-3UTR CCA 90 bp CCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGGGCGGGGGCGTTCACTaGTCTTCAATCCTGCTTAAG +
Preference number: 4 (lower is better)
Translates to: PTFTGLHIVVGKDWPPRKGGGVH*SSILLK
Trigger: CTTAAGCAGGATTGAAGACCAGTGAACGCCCCCGCC...CTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp CGTGCCTCTGCTCTCTGGCCTGCTTCTAGACTGAGGCAGTCCAGGTCAGCGTCAAGCCAGCTACCCGTATaGGATGGAGCTATGTGGGCC +
Preference number: 4 (lower is better)
Translates to: RASALWPASRLRQSRSASSQLPV*DGAMWA
Trigger: GGCCCACATAGCTCCATCCCATACGGGTAGCTGGCT...TGACGCTGACCTGGACTGCCTCAGTCTAGAAGCAGGCCAGAGAGCAGAGGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp GCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTCACAGCCAGCTACCCGTATaGGATGGAGCTATGTGGGCC +
Preference number: 4 (lower is better)
Translates to: AVAATPAGVLPHYTQKRHSQLPV*DGAMWA
Trigger: GGCCCACATAGCTCCATCCCATACGGGTAGCTGGCT...GTGACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR CCA 90 bp TGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCTTCATCTGATGCCATaGCGGCCTGTGGCAGACACC +
Preference number: 4 (lower is better)
Translates to: CHSSRKHLQGTSLLGKRLLHLMP*RPVADT
Trigger: GGTGTCTGCCACAGGCCGCCATGGCATCAGATGAAG...CAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586773.5
CDS-3UTR CCA 90 bp TTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCAGGCTTTTCTTCCAGTaGCCCCGCTCCGCCGACAGA +
Preference number: 4 (lower is better)
Translates to: FESDFHRAPHRCGQGLAARLFFQ*PRSADR
Trigger: TCTGTCGGCGGAGCGGGGCCACTGGAAGAAAAGCCT...GGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586636.5
ENST00000591376.5
CDS-3UTR TCA 90 bp GGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCGATCTGTCCGTACTTTaGGAAGACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: GQASWASGCLQLLFQVKSDLSVL*EDLLQR
Trigger: TCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATC...GGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
CDS-3UTR TCA 90 bp CCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCTGCCGATCTGTCCGTACTTTaGGAAGACCTGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: PLFPKALTGDKPPGQAAADLSVL*EDLLQR
Trigger: TCGCTGGAGCAGGTCTTCTCAAAGTACGGACAGATC...GGCAGCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
CDS-3UTR TCA 90 bp AACGAGGCCATCCCGGCGTCAGAAGCGGTCAGGCTGGGTTTGACAAGATCAGAAACGGGATCGGTTGTCTaGCGACTTGCCTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: NEAIPASEAVRLGLTRSETGSVV*RLACLV
Trigger: GACCAGGCAGGCAAGTCGTCAGACAACCGATCCCGT...TTCTGATCTTGTCAAACCCAGCCTGACCGCTTCTGACGCCGGGATGGCCTCGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320936.9
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
CDS-3UTR TCA 90 bp GAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTGACTTACCGTTTGGAAGGACGATCTTaGGCAGGAAGGGTTTTTACT +
Preference number: 4 (lower is better)
Translates to: ELPPQATAAWRPRSVTYRLEGRS*AGRVFT
Trigger: AGTAAAAACCCTTCCTGCTCAAGATCGTCCTTCCAA...ACGGTAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp CCAGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACTCGATCTCAGAGAAGTaGGTGGGGCACCCACTTCAT +
Preference number: 4 (lower is better)
Translates to: PGQLLPHPPGSYHTTLRNSISEK*VGHPLH
Trigger: ATGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGA...GTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR TCA 90 bp GCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTCTTCTGACACATGCACCTAGCTaGCTGCCCAGCGGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: AFASCDRNGSERTDAPLLTHAPS*LPSGPS
Trigger: CGAGGGCCCGCTGGGCAGTCAGCTAGGTGCATGTGT...CAGAAGAGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR TCA 90 bp CGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGACCCCAGGCTATTTCCACATATaGGCTAGCCAAGGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: RLPPALVPGEVPPGTVTPGYFHI*ASQGSS
Trigger: GCTGCTCCCTTGGCTAGCTCATATGTGGAAATAGCC...TGGGGTCACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444172.6
ENST00000585914.5
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
ENST00000592234.5
CDS-3UTR TCA 90 bp CATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGCAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 4 (lower is better)
Translates to: HATLPESTYRGQASWASGSSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...GCCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
CDS-3UTR TCA 90 bp ATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTCTTGTTCCAGGTaGAGTCCCTCCTGGGACAGT +
Preference number: 4 (lower is better)
Translates to: IRLSQGSTSLWARTGRPVSSCSR*SPSWDS
Trigger: ACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCT...TACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR TCA 90 bp CTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGAGAGACTCGAGGCCCTaGGCCCGCACCTCACTGGCG +
Preference number: 4 (lower is better)
Translates to: LYSNPTFTGLHIVVGKDWRDSRP*ARTSLA
Trigger: CGCCAGTGAGGTGCGGGCTCAGGGCCTCGAGTCTCT...CCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR TCA 90 bp ACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGTAAGCTGTCCTGCTCAGCACCCTaGTCCTCACCTTCCCATTCA +
Preference number: 4 (lower is better)
Translates to: TFTGLHIVVGKDWPPRKLSCSAP*SSPSHS
Trigger: TGAATGGGAAGGTGAGGATCAGGGTGCTGAGCAGGA...CAGCTTACGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590347.5
CDS-3UTR TCA 90 bp ATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCGGCCTGCTTCTAGACTaGGGCAGTCCAGGTCAGCGT +
Preference number: 4 (lower is better)
Translates to: IRIRLSQGSTSLWARTGRGLLLD*GSPGQR
Trigger: ACGCTGACCTGGACTGCCTCAGTCTAGAAGCAGGCC...GCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR TCA 90 bp GGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGAGAGAGCAGGACTCACTaGAACGCCCAGGTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: GPLFESDFHRAPHRCGQGESRTH*NAQVPP
Trigger: GGGCGGCACCTGGGCGTTTCAGTGAGTCCTGCTCTC...TCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587896.6
ENST00000589235.5
CDS-3UTR TCA 90 bp CACCTAGCTGACTGCCCAGCGGGCCCTCGCTCTCCCTTGCCTTTTTGGTCAGTCAAGTTTGCCTTCATCTaGTGCCATGGCGGCTACGAG +
Preference number: 4 (lower is better)
Translates to: HLADCPAGPRSPLPFWSVKFAFI*CHGGYE
Trigger: CTCGTAGCCGCCATGGCATCAGATGAAGGCAAACTT...GACTGACCAAAAAGGCAAGGGAGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586548.5
CDS-3UTR GCA 90 bp CCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTGACTTACCGTAACTGTTGGTCTACTCGGATCTaGCGTCCATCTACAGACTTC +
Preference number: 4 (lower is better)
Translates to: PPQATAAWRPRSVTYRNCWSTRI*RPSTDF
Trigger: GAAGTCTGTAGATGGACGGCAGATCCGAGTAGACCA...ACAGTTACGGTAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000591097.5
CDS-3UTR GCA 90 bp GCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCTATAGTAGTCGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGA +
Preference number: 4 (lower is better)
Translates to: ARAPVTVATTLTPAAIVVGCLTT*LPGLLG
Trigger: TCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACC...GACTACTATAGCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR GCA 90 bp ACTGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTGGTTGTCTGACGACTTaGCTGCCTGGTCTACTCGGA +
Preference number: 4 (lower is better)
Translates to: TVSVGPARAPVTVATTLTGCLTT*LPGLLG
Trigger: TCCGAGTAGACCAGGCAGGCAAGTCGTCAGACAACC...AGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591097.5
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR GCA 90 bp TCAGCTTCCGACAAAGAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTGGGCTCCAGGGCAGTTaGTGCCACACCCGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: SASDKERIHSPFDLREVSGLQGS*CHTRRG
Trigger: ACCCCGGCGGGTGTGGCAGCAACTGCCCTGGAGCCC...ACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTCTTTGTCGGAAGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp CGAGCTCCCACCGCAGGCCACAGCAGCGTGGCGCCCTCGGAGTGTGACTTACCGGAATTCCTCAGCCACTaGAAATACAACATCGATGGA +
Preference number: 4 (lower is better)
Translates to: RAPTAGHSSVAPSECDLPEFLSH*KYNIDG
Trigger: TCCATCGATGTTGTATTTGCAGTGGCTGAGGAATTC...CGGTAAGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTGCGGTGGGAGCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp CAACACACACCGAAAGGCGCCCGCCATGGGGCCATAGGTGCGGGAGAGCAGGACTTGGCTTTTGCGTCCTaGGATAGAAATGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: QHTPKGARHGAIGAGEQDLAFAS*DRNGSE
Trigger: CTCAGAGCCATTTCTATCGCAGGACGCAAAAGCCAA...GTCCTGCTCTCCCGCACCTATGGCCCCATGGCGGGCGCCTTTCGGTGTGTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587896.6
CDS-3UTR GCA 90 bp GAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTCAATGCACCTAGCTGACTaGCCAGCGGGCCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: ERIHSPFDLREVSGAPTSMHLAD*PAGPRS
Trigger: AGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCAT...TGAAGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000413636.6
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000589710.5
ENST00000590347.5
CDS-3UTR GCA 90 bp CTGAGAGGACAGATGCGCCTCTTCTGGGCAAGCACAGTGACAAGGTCTGAGTGTATGCACCTAGCTGACTaGCCAGCGGGCCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: LRGQMRLFWASTVTRSECMHLAD*PAGPRS
Trigger: AGAGCGAGGGCCCGCTGGGCAGTCAGCTAGGTGCAT...ACACTCAGACCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTGTCCTCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR GCA 90 bp CTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCGAGTGTGTGGTGCAATaGAAGGGAATTGTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LCRTRPSSGHCSHHSDSGECVVQ*KGIVRA
Trigger: TGCTCTGACAATTCCCTTGCATTGCACCACACACTC...GCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590347.5
CDS-3UTR GCA 90 bp AGTAACGAGGCCATCCCGGCGTCAGAAGCGGTCAGGCTGGGTTTGACAAGATCACAGGTCAGCGTCAGGTaGACGTCCACTGTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: SNEAIPASEAVRLGLTRSQVSVR*TSTVPA
Trigger: AGCAGGGACAGTGGACGTGCACCTGACGCTGACCTG...TGATCTTGTCAAACCCAGCCTGACCGCTTCTGACGCCGGGATGGCCTCGTTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587169.5
ENST00000587896.6
ENST00000590347.5
CDS-3UTR GCA 90 bp AAAGAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTTGCCATGGCGGCCTGTaGCTCTGGGGTCAGCTGCGT +
Preference number: 4 (lower is better)
Translates to: KERIHSPFDLREVSGAPTCHGGL*LWGQLR
Trigger: ACGCAGCTGACCCCAGAGGCACAGGCCGCCATGGCA...AGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588090.5
CDS-3UTR CCA 90 bp AGGGGACAAGCCTCCTGGGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGCCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: RGQASWASGCLQLLFQVKPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...CTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
CDS-3UTR CCA 90 bp GAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCCGCCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: ESDFHRAPHRCGQGLAAPPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...CGGGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
CDS-3UTR CCA 90 bp GGCAAGCGGCTGCCTCCAGCTCTTGTTCCAGGTGAAGTCCCTCCTGGGACAGTGCCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: GKRLPPALVPGEVPPGTVPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...CACTGTCCCAGGAGGGACTTCACCTGGAACAAGAGCTGGAGGCAGCCGCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000585913.5
ENST00000585914.5
ENST00000586636.5
ENST00000586773.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000591935.5
CDS-3UTR CCA 90 bp TGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCCCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: CLCRTRPSSGHCSHHSDSPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...GGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591055.5
ENST00000591097.5
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR CCA 90 bp ACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCTATAGTCCAGCGACTGCTCATTaGTGTCAAAACTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: TRPSSGHCSHHSDSGCYSPATAH*CQNSAL
Trigger: GAGGGCTGAGTTTTGACACCAATGAGCAGTCGCTGG...ACTATAGCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR CCA 90 bp ACATGCCACTCTTCCCGAAAGCACTTACAGGGGACAAGCCTCCTGGGCAAGCGGGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: TCHSSRKHLQGTSLLGKRDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...CCGCTTGCCCAGGAGGCTTGTCCCCTGTAAGTGCTTTCGGGAAGAGTGGCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586773.5
ENST00000587896.6
ENST00000589235.5
ENST00000591935.5
CDS-3UTR CCA 90 bp ATAACTGTCTCTGTAGGACCCGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGGACGACTTGCCTGCCTaGTCTACTCGGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: ITVSVGPARAPVTVATTLDDLPA*STRICR
Trigger: ACGGCAGATCCGAGTAGACCAGGCAGGCAAGTCGTC...CAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCGGGTCCTACAGAGACAGTTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000587169.5
ENST00000590171.1
ENST00000591097.5
ENST00000591376.5
ENST00000592412.5
ENST00000593048.5
CDS-3UTR CCA 90 bp AAAGAGCGGATTCACAGTCCGTTCGATCTCAGAGAAGTGAGTGGGGCACCCACTCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: KERIHSPFDLREVSGAPTRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...AGTGGGTGCCCCACTCACTTCTCTGAGATCGAACGGACTGTGAATCCGCTCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp GTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: VHTWPFIRIRLSQGSTSLRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...CAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp TCTGGGTGCACACGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: SGCTRGPLFESDFHRAPHRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...ATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACGTGTGCACCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp ACCACAGACTCGGCTTTCTGGGTGCACACGTGGCCCTTTATTCGAATCCGACTTCGTAGCCCCCACTCCTaGACTCGAACCGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: TTDSAFWVHTWPFIRIRLRSPHS*TRTGSP
Trigger: GGGGGAACCGGTTCGAGTCCAGGAGTGGGGGCTACG...AAGTCGGATTCGAATAAAGGGCCACGTGTGCACCCAGAAAGCCGAGTCTGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586636.5
ENST00000591376.5
CDS-3UTR CCA 90 bp AGGGCAGTTGCTGCCACACCCGCCGGGGTCCTACCACACTACACTCAGAAACGTTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: RAVAATPAGVLPHYTQKRCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...ACGTTTCTGAGTGTAGTGTGGTAGGACCCCGGCGGGTGTGGCAGCAACTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000320936.9
ENST00000413636.6
ENST00000586472.5
ENST00000586548.5
ENST00000587169.5
ENST00000587896.6
ENST00000588030.5
ENST00000588090.5
ENST00000589710.5
ENST00000590347.5
CDS-3UTR CCA 90 bp CTAGCTGACTGCCCAGCGGGCCCTCGCTCTCCCTTGCCTTTTTGGTCAGTCTCATGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: LADCPAGPRSPLPFWSVSCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...TGAGACTGACCAAAAAGGCAAGGGAGAGCGAGGGCCCGCTGGGCAGTCAGCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CCA 90 bp TCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGGACTGGCCGCCCTGCTATAGTAGTCTCTaGAGCCTCCGTAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: SNPTFTGLHIVVGKDWPPCYSSL*SLRSPH
Trigger: GTGGGGGCTACGGAGGCTCCAGAGACTACTATAGCA...GGGCGGCCAGTCCTTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5
ENST00000592234.5
CDS-3UTR CCA 90 bp GCTTTTGCGTCCTGCGATAGAAATGGCTCTGAGAGGACAGATGCGCCTCTTCTGCAGGCCACAGCAGCGTaGCGCCCTCGGAGTGTGACT +
Preference number: 4 (lower is better)
Translates to: AFASCDRNGSERTDAPLLQATAA*RPRSVT
Trigger: AGTCACACTCCGAGGGCGCCACGCTGCTGTGGCCTG...CAGAAGAGGCGCATCTGTCCTCTCAGAGCCATTTCTATCGCAGGACGCAAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586548.5
ENST00000587169.5
ENST00000590171.1
ENST00000590347.5
ENST00000591097.5
CDS-3UTR CCA 90 bp CGCCCGAGCTCCGGTCACTGTAGCCACCACTCTGACTCCGGCTGCTATAGTAGTCAGATGCGCCTCTTCTaGGCAAGCACAGTGACAAGG +
Preference number: 4 (lower is better)
Translates to: RPSSGHCSHHSDSGCYSSQMRLF*ASTVTR
Trigger: CCTTGTCACTGTGCTTGCCCAGAAGAGGCGCATCTG...ACTACTATAGCAGCCGGAGTCAGAGTGGTGGCTACAGTGACCGGAGCTCGGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587169.5
ENST00000590171.1
CDS-3UTR CCA 90 bp AACCACAGACTCGGCTTTCTGGGTGCACACGTGGCCCTTTATTCGAATCCGACTAGGGGACAAGCCTCCTaGGCAAGCGGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: NHRLGFLGAHVALYSNPTRGQAS*ASGCLQ
Trigger: CTGGAGGCAGCCGCTTGCCCAGGAGGCTTGTCCCCT...AGTCGGATTCGAATAAAGGGCCACGTGTGCACCCAGAAAGCCGAGTCTGTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586636.5
ENST00000591376.5
CDS-3UTR CCA 90 bp CGTGGCCCTTTATTCGAATCCGACTTTCACAGGGCTCCACATCGTTGTGGGCAAGTTGTGGGCAAGGACTaGCCGCCCCGTAAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: RGPLFESDFHRAPHRCGQVVGKD*PPRKLP
Trigger: CGGCAGCTTACGGGGCGGCCAGTCCTTGCCCACAAC...TTGCCCACAACGATGTGGAGCCCTGTGAAAGTCGGATTCGAATAAAGGGCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000444172.6
ENST00000585913.5
ENST00000586636.5
ENST00000587169.5
ENST00000587896.6
ENST00000589235.5
ENST00000590347.5
ENST00000591376.5