RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CILK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000112144

Ensembl transcript IDs: ENST00000350082.10, ENST00000356971.3, ENST00000676107.1

Found 498 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTTTTATGCCCTCTGCACATCTTGCAGGTAGAACACCAGTCAGCTaGGGGAAAGTATCCTGCTTCTCCCTAGGAAGAGATTCATCACCA +
Preference number: 1 (lower is better)
Translates to: AFMPSAHLAGRTPVS*GKVSCFSLGRDSSP
Trigger: TGGTGATGAATCTCTTCCTAGGGAGAAGCAGGATACTTTCCCTCAGCTGACTGGTGTTCTACCTGCAAGATGTGCAGAGGGCATAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR TCA 90 bp CACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTaGATTTCTGTCTCATTTCGGCACGAAATGAGAACCAACCCTGTA +
Preference number: 1 (lower is better)
Translates to: HYLGHINTPTTHLRH*ISVSFRHEMRTNPV
Trigger: TACAGGGTTGGTTCTCATTTCGTGCCGAAATGAGACAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR CCA 90 bp GTTAGGAGATCAAATGTGGCATGTGACTGTGACTTTGTAGATGAGTaGAACCTCTGCCATAACTCTTTCTGCTCCCCAAATTGTCCTGAG +
Preference number: 1 (lower is better)
Translates to: VRRSNVACDCDFVDE*NLCHNSFCSPNCPE
Trigger: CTCAGGACAATTTGGGGAGCAGAAAGAGTTATGGCAGAGGTTCCACTCATCTACAAAGTCACAGTCACATGCCACATTTGATCTCCTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR GCA 90 bp TCAAATGTGGCATGTGACTGTGACTTTGTAGATGAGTGGAACCTCTaGCATAACTCTTTCTGCTCCCCAAATTGTCCTGAGAATTTGGCT +
Preference number: 1 (lower is better)
Translates to: SNVACDCDFVDEWNL*HNSFCSPNCPENLA
Trigger: AGCCAAATTCTCAGGACAATTTGGGGAGCAGAAAGAGTTATGGCAGAGGTTCCACTCATCTACAAAGTCACAGTCACATGCCACATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR GCA 90 bp CAATGGCTTGATGGTAGGGAAATGCTACTTCATGAGAAAGCATGGTaGCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAATAAA +
Preference number: 1 (lower is better)
Translates to: QWLDGREMLLHEKAW*PSTPTVPVFALKNK
Trigger: TTTATTTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAAGTAGCATTTCCCTACCATCAAGCCATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR CCA 90 bp AAACAATGGCTTGATGGTAGGGAAATGCTACTTCATGAGAAAGCATaGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAAT +
Preference number: 1 (lower is better)
Translates to: KQWLDGREMLLHEKA*CPSTPTVPVFALKN
Trigger: ATTTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAAGTAGCATTTCCCTACCATCAAGCCATTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR GCA 90 bp GAATTCAGCTTCAAGTTGTGCTTGCATATATATTTTCTGAAGCTTTaGTGCCAGCTTGTTAACAGGAAAAGACCACCTATCACATCCACA +
Preference number: 1 (lower is better)
Translates to: EFSFKLCLHIYFLKL*CQLVNRKRPPITST
Trigger: TGTGGATGTGATAGGTGGTCTTTTCCTGTTAACAAGCTGGCAGCAAAGCTTCAGAAAATATATATGCAAGCACAACTTGAAGCTGAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR CCA 90 bp ACATCCATTATGTGCTTTTCTCATGCCCCTAGGGATCATGGTGCTTaGTCAAGTATATATTTGAGTCAAATTCTCCAAAGCATAAATTAC +
Preference number: 1 (lower is better)
Translates to: TSIMCFSHAPRDHGA*SSIYLSQILQSINY
Trigger: GTAATTTATGCTTTGGAGAATTTGACTCAAATATATACTTGACCAAGCACCATGATCCCTAGGGGCATGAGAAAAGCACATAATGGATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGGGAGGTGGAGGAGGGTaGATCACGAGGTCAGGAGAT +
Preference number: 2 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLGGGGG*ITRSGD
Trigger: ATCTCCTGACCTCGTGATCCACCCTCCTCCACCTCC...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGCAGTACTTTGGGAGGTaGAGGAGGGTGGATCACGAG +
Preference number: 2 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLQYFGR*RRVDHE
Trigger: CTCGTGATCCACCCTCCTCCACCTCCCAAAGTACTG...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGGCTCCTAGCCAGATCTaGAGAACTGAGCTAGGCACA +
Preference number: 2 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLAPSQI*RTELGT
Trigger: TGTGCCTAGCTCAGTTCTCCAGATCTGGCTAGGAGC...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR GCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCACTGGGAGGCAGAGGTTaGAGAGAGCTAAGATCGCGC +
Preference number: 2 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSLGGRG*RELRSR
Trigger: GCGCGATCTTAGCTCTCTGCAACCTCTGCCTCCCAG...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAGGAGGTGGAGGAGGGTaGATCACGAGGTCAGGAGAT +
Preference number: 2 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSGGGGG*ITRSGD
Trigger: ATCTCCTGACCTCGTGATCCACCCTCCTCCACCTCC...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR GCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGACTGGGAGGCAGAGGTTaGAGAGAGCTAAGATCGCGC +
Preference number: 2 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRLGGRG*RELRSR
Trigger: GCGCGATCTTAGCTCTCTGCAACCTCTGCCTCCCAG...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR GCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAACTGGGAGGCAGAGGTTaGAGAGAGCTAAGATCGCGC +
Preference number: 2 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKLGGRG*RELRSR
Trigger: GCGCGATCTTAGCTCTCTGCAACCTCTGCCTCCCAG...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR GCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCACAGTTTTCCCTACTCTaGTGGCACTACCTGGGGCAC +
Preference number: 2 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSQFSLL*WHYLGH
Trigger: GTGCCCCAGGTAGTGCCAGCAGAGTAGGGAAAACTG...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAGGAGGTGGAGGAGGGTaGATCACGAGGTCAGGAGAT +
Preference number: 2 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKGGGGG*ITRSGD
Trigger: ATCTCCTGACCTCGTGATCCACCCTCCTCCACCTCC...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCACAGTACTTTGGGAGGTaGAGGAGGGTGGATCACGAG +
Preference number: 2 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSQYFGR*RRVDHE
Trigger: CTCGTGATCCACCCTCCTCCACCTCCCAAAGTACTG...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR TCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGCAGAACATTAGTCATTaGCTGCTCCTAGCCAGATCT +
Preference number: 2 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLQNISH*LLLARS
Trigger: AGATCTGGCTAGGAGCAGTCAATGACTAATGTTCTG...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGAAACATTCCTCTCAATaGAACAGCCTCTGCCCAACA +
Preference number: 2 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLKHSSQ*NSLCPT
Trigger: TGTTGGGCAGAGGCTGTTCCATTGAGAGGAATGTTT...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGACAGTACTTTGGGAGGTaGAGGAGGGTGGATCACGAG +
Preference number: 2 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRQYFGR*RRVDHE
Trigger: CTCGTGATCCACCCTCCTCCACCTCCCAAAGTACTG...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAGTAATCCCAGTACTTTaGGAGGTGGAGGAGGGTGGA +
Preference number: 2 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSVIPVL*EVEEGG
Trigger: TCCACCCTCCTCCACCTCCCAAAGTACTGGGATTAC...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGTGCTTTCCAGCAAGCTaGGCCAGGTTTCACATTAAT +
Preference number: 2 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLCFPAS*ARFHIN
Trigger: ATTAATGTGAAACCTGGCCCAGCTTGCTGGAAAGCA...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR TCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAGAACACCAGTCAGCTaGGGGAAAGTATCCTGCTTC +
Preference number: 2 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSRTPVS*GKVSCF
Trigger: GAAGCAGGATACTTTCCCTCAGCTGACTGGTGTTCT...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR GCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGCAATGGAACAGCCTCTaGCCAACAAATAAAGTTCTC +
Preference number: 2 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLQWNSL*PTNKVL
Trigger: GAGAACTTTATTTGTTGGGCAGAGGCTGTTCCATTG...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGGACTTTGTAGATGAGTaGAACCTCTGCCATAACTCT +
Preference number: 2 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLDFVDE*NLCHNS
Trigger: AGAGTTATGGCAGAGGTTCCACTCATCTACAAAGTC...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAGTAATCCCAGTACTTTaGGAGGTGGAGGAGGGTGGA +
Preference number: 2 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRVIPVL*EVEEGG
Trigger: TCCACCCTCCTCCACCTCCCAAAGTACTGGGATTAC...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGGCCCTTTGGAAGCCATaGTTATTTGTTCAGAATGCA +
Preference number: 2 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLALWKP*LFVQNA
Trigger: TGCATTCTGAACAAATAACCATGGCTTCCAAAGGGC...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAATCTGCTGGCACTACCTaGGGCACATCAATACCCCTA +
Preference number: 2 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKSAGTT*GTSIPL
Trigger: TAGGGGTATTGATGTGCCCCAGGTAGTGCCAGCAGA...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR TCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAAGAACACCAGTCAGCTaGGGGAAAGTATCCTGCTTC +
Preference number: 2 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRRTPVS*GKVSCF
Trigger: GAAGCAGGATACTTTCCCTCAGCTGACTGGTGTTCT...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR TCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATCCAGATCTGGAGAACTaGGCTAGGCACAAAATTCCA +
Preference number: 2 (lower is better)
Translates to: VTFPLAFKATISEANVPYPDLEN*ARHKIP
Trigger: TGGAATTTTGTGCCTAGCTCAGTTCTCCAGATCTGG...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR GCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAGATGAGTGGAACCTCTaGCATAACTCTTTCTGCTCC +
Preference number: 2 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSDEWNL*HNSFCS
Trigger: GGAGCAGAAAGAGTTATGGCAGAGGTTCCACTCATC...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR GCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGTTTCTGAAGCTTTGCTaGCAGCTTGTTAACAGGAAA +
Preference number: 2 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLFLKLC*QLVNRK
Trigger: TTTCCTGTTAACAAGCTGGCAGCAAAGCTTCAGAAA...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR GCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCACTTCCCCAGGGAAGTTaGTTGCTGGTAAACAAACGA +
Preference number: 2 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSLPQGS*LLVNKR
Trigger: TCGTTTGTTTACCAGCAAGCAACTTCCCTGGGGAAG...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGTTAGGAGATCAAATGTaGCATGTGACTGTGACTTTG +
Preference number: 2 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLLGDQM*HVTVTL
Trigger: CAAAGTCACAGTCACATGCCACATTTGATCTCCTAA...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR TCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGAATATCTGCACACACTaGGTAAATAACCCTCTATCA +
Preference number: 2 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLNICTH*VNNPLS
Trigger: TGATAGAGGGTTATTTACTCAGTGTGTGCAGATATT...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR TCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGACCAGATCTGGAGAACTaGGCTAGGCACAAAATTCCA +
Preference number: 2 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRPDLEN*ARHKIP
Trigger: TGGAATTTTGTGCCTAGCTCAGTTCTCCAGATCTGG...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR TCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCACATTTCGGCACGAAATaGGAACCAACCCTGTATCAT +
Preference number: 2 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSHFGTK*EPTLYH
Trigger: ATGATACAGGGTTGGTTCTCATTTCGTGCCGAAATG...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR GCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAGATGAGTGGAACCTCTaGCATAACTCTTTCTGCTCC +
Preference number: 2 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRDEWNL*HNSFCS
Trigger: GGAGCAGAAAGAGTTATGGCAGAGGTTCCACTCATC...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR GCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAACTTCCCCAGGGAAGTTaGTTGCTGGTAAACAAACGA +
Preference number: 2 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKLPQGS*LLVNKR
Trigger: TCGTTTGTTTACCAGCAAGCAACTTCCCTGGGGAAG...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGAGGGATCATGGTGCTTaGTCAAGTATATATTTGAGT +
Preference number: 2 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLRDHGA*SSIYLS
Trigger: ACTCAAATATATACTTGACCAAGCACCATGATCCCT...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCATGCTTTCCAGCAAGCTaGGCCAGGTTTCACATTAAT +
Preference number: 2 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSCFPAS*ARFHIN
Trigger: ATTAATGTGAAACCTGGCCCAGCTTGCTGGAAAGCA...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR TCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCACCATATAGAGATGGATaGGACTGGACCTTTTGTCTT +
Preference number: 2 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSPYRDG*DWTFCL
Trigger: AAGACAAAAGGTCCAGTCTCATCCATCTCTATATGG...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR TCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAACATTTCGGCACGAAATaGGAACCAACCCTGTATCAT +
Preference number: 2 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKHFGTK*EPTLYH
Trigger: ATGATACAGGGTTGGTTCTCATTTCGTGCCGAAATG...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR GCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGTATAAAGTGTTGATTTaGTTTTATGCCCTCTGCACA +
Preference number: 2 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLYKVLI*FYALCT
Trigger: TGTGCAGAGGGCATAAAAGCAAATCAACACTTTATA...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR GCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCACACATAGCCTTAAATTaGACCCCTGTTGCAATACTG +
Preference number: 2 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSHIALN*TPVAIL
Trigger: CAGTATTGCAACAGGGGTGCAATTTAAGGCTATGTG...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR GCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAATCCACATCCATTATGTaGTTTTCTCATGCCCCTAGG +
Preference number: 2 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKSTSIM*FSHAPR
Trigger: CCTAGGGGCATGAGAAAAGCACATAATGGATGTGGA...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGTTTAGAACAGCAGAGTaGTATCCAAAAATCAAACCA +
Preference number: 2 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLFRTAE*YPKIKP
Trigger: TGGTTTGATTTTTGGATACCACTCTGCTGTTCTAAA...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAAAACATTCCTCTCAATaGAACAGCCTCTGCCCAACA +
Preference number: 2 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKKHSSQ*NSLCPT
Trigger: TGTTGGGCAGAGGCTGTTCCATTGAGAGGAATGTTT...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAAAACATTCCTCTCAATaGAACAGCCTCTGCCCAACA +
Preference number: 2 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRKHSSQ*NSLCPT
Trigger: TGTTGGGCAGAGGCTGTTCCATTGAGAGGAATGTTT...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCATCATGTAACAAGAAATaGCTGCAGGTTCTCAGTCAG +
Preference number: 2 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSSCNKK*LQVLSQ
Trigger: CTGACTGAGAACCTGCAGCCATTTCTTGTTACATGA...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR TCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAACCATATAGAGATGGATaGGACTGGACCTTTTGTCTT +
Preference number: 2 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKPYRDG*DWTFCL
Trigger: AAGACAAAAGGTCCAGTCTCATCCATCTCTATATGG...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR TCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAGCCCTAGGAGAATATaGATCAATACACTGTTGAGA +
Preference number: 2 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSSPRRI*INTLLR
Trigger: TCTCAACAGTGTATTGATTCATATTCTCCTAGGGCT...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR TCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCACTTTCTGACTGTAAATaGGGTATAGTCCTGATAGGT +
Preference number: 2 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSLSDCK*GIVLIG
Trigger: ACCTATCAGGACTATACCTCATTTACAGTCAGAAAG...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR GCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGACACATAGCCTTAAATTaGACCCCTGTTGCAATACTG +
Preference number: 2 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRHIALN*TPVAIL
Trigger: CAGTATTGCAACAGGGGTGCAATTTAAGGCTATGTG...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR GCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGACAATGGAACAGCCTCTaGCCAACAAATAAAGTTCTC +
Preference number: 2 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRQWNSL*PTNKVL
Trigger: GAGAACTTTATTTGTTGGGCAGAGGCTGTTCCATTG...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR GCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCATTTCTGAAGCTTTGCTaGCAGCTTGTTAACAGGAAA +
Preference number: 2 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSFLKLC*QLVNRK
Trigger: TTTCCTGTTAACAAGCTGGCAGCAAAGCTTCAGAAA...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCATTAGGAGATCAAATGTaGCATGTGACTGTGACTTTG +
Preference number: 2 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSLGDQM*HVTVTL
Trigger: CAAAGTCACAGTCACATGCCACATTTGATCTCCTAA...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATTTAGGAGATCAAATGTaGCATGTGACTGTGACTTTG +
Preference number: 2 (lower is better)
Translates to: VTFPLAFKATISEANVPYLGDQM*HVTVTL
Trigger: CAAAGTCACAGTCACATGCCACATTTGATCTCCTAA...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAGCCCTTTGGAAGCCATaGTTATTTGTTCAGAATGCA +
Preference number: 2 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKALWKP*LFVQNA
Trigger: TGCATTCTGAACAAATAACCATGGCTTCCAAAGGGC...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAATCATGTAACAAGAAATaGCTGCAGGTTCTCAGTCAG +
Preference number: 2 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKSCNKK*LQVLSQ
Trigger: CTGACTGAGAACCTGCAGCCATTTCTTGTTACATGA...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR TCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATAATATCTGCACACACTaGGTAAATAACCCTCTATCA +
Preference number: 2 (lower is better)
Translates to: VTFPLAFKATISEANVPYNICTH*VNNPLS
Trigger: TGATAGAGGGTTATTTACTCAGTGTGTGCAGATATT...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR TCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAAGCCCTAGGAGAATATaGATCAATACACTGTTGAGA +
Preference number: 2 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKSPRRI*INTLLR
Trigger: TCTCAACAGTGTATTGATTCATATTCTCCTAGGGCT...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR TCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAAGCCCTAGGAGAATATaGATCAATACACTGTTGAGA +
Preference number: 2 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRSPRRI*INTLLR
Trigger: TCTCAACAGTGTATTGATTCATATTCTCCTAGGGCT...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR TCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAACTTTCTGACTGTAAATaGGGTATAGTCCTGATAGGT +
Preference number: 2 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKLSDCK*GIVLIG
Trigger: ACCTATCAGGACTATACCTCATTTACAGTCAGAAAG...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR GCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAATTTCTGAAGCTTTGCTaGCAGCTTGTTAACAGGAAA +
Preference number: 2 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKFLKLC*QLVNRK
Trigger: TTTCCTGTTAACAAGCTGGCAGCAAAGCTTCAGAAA...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR TCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAAATATCTGCACACACTaGGTAAATAACCCTCTATCA +
Preference number: 2 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKNICTH*VNNPLS
Trigger: TGATAGAGGGTTATTTACTCAGTGTGTGCAGATATT...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR GCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCATATAAAGTGTTGATTTaGTTTTATGCCCTCTGCACA +
Preference number: 2 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSYKVLI*FYALCT
Trigger: TGTGCAGAGGGCATAAAAGCAAATCAACACTTTATA...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR GCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATTATAAAGTGTTGATTTaGTTTTATGCCCTCTGCACA +
Preference number: 2 (lower is better)
Translates to: VTFPLAFKATISEANVPYYKVLI*FYALCT
Trigger: TGTGCAGAGGGCATAAAAGCAAATCAACACTTTATA...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATTTTAGAACAGCAGAGTaGTATCCAAAAATCAAACCA +
Preference number: 2 (lower is better)
Translates to: VTFPLAFKATISEANVPYFRTAE*YPKIKP
Trigger: TGGTTTGATTTTTGGATACCACTCTGCTGTTCTAAA...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAATTTAGAACAGCAGAGTaGTATCCAAAAATCAAACCA +
Preference number: 2 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKFRTAE*YPKIKP
Trigger: TGGTTTGATTTTTGGATACCACTCTGCTGTTCTAAA...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR CCA 72 bp TGCAAATGCAGTTTTCCCTACTCTGCTGGCACTACCTaGGGCACATCAATACCCCTACAACGCACCTTCGTC +
Preference number: 3 (lower is better)
Translates to: CKCSFPYSAGTT*GTSIPLQRTFV
Trigger: GACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGTGCCAGCAGAGTAGGGAAAACTGCATTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGTGCCCTCTGCACATCTaGCAGGTAGAACACCAGTCA +
Preference number: 3 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLCPLHI*QVEHQS
Trigger: TGACTGGTGTTCTACCTGCAAGATGTGCAGAGGGCA...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR TCA 72 bp CCCTCTGCACATCTTGCAGGTAGAACACCAGTCAGCTaGGGGAAAGTATCCTGCTTCTCCCTAGGAAGAGAT +
Preference number: 3 (lower is better)
Translates to: PSAHLAGRTPVS*GKVSCFSLGRD
Trigger: ATCTCTTCCTAGGGAGAAGCAGGATACTTTCCCTCAGCTGACTGGTGTTCTACCTGCAAGATGTGCAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGACTGTTGAGATTGCATaGCGTTCACTGATGGTGACC +
Preference number: 3 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLTVEIA*RSLMVT
Trigger: GGTCACCATCAGTGAACGCAATGCAATCTCAACAGT...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCATGTAATCCCAGTACTTaGGGAGGTGGAGGAGGGTGG +
Preference number: 3 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSCNPST*GGGGGW
Trigger: CCACCCTCCTCCACCTCCCAAAGTACTGGGATTACA...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGAGCTTTGCTGCCAGCTaGTTAACAGGAAAAGACCAC +
Preference number: 3 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLSFAAS*LTGKDH
Trigger: GTGGTCTTTTCCTGTTAACAAGCTGGCAGCAAAGCT...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR TCA 72 bp GGGCACATCAATACCCCTACAACGCACCTTCGTCACTaGATTTCTGTCTCATTTCGGCACGAAATGAGAACC +
Preference number: 3 (lower is better)
Translates to: GHINTPTTHLRH*ISVSFRHEMRT
Trigger: GGTTCTCATTTCGTGCCGAAATGAGACAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATTGCCCTCTGCACATCTaGCAGGTAGAACACCAGTCA +
Preference number: 3 (lower is better)
Translates to: VTFPLAFKATISEANVPYCPLHI*QVEHQS
Trigger: TGACTGGTGTTCTACCTGCAAGATGTGCAGAGGGCA...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCATGCCCTCTGCACATCTaGCAGGTAGAACACCAGTCA +
Preference number: 3 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSCPLHI*QVEHQS
Trigger: TGACTGGTGTTCTACCTGCAAGATGTGCAGAGGGCA...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAAGTTACTCAGGAGGCTaGAACCTGGGAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKSYSGG*NLGGRG
Trigger: ACCTCTGCCTCCCAGGTTCAAGCCTCCTGAGTAACT...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAAGTTACTCAGGAGGCTaGAACCTGGGAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRSYSGG*NLGGRG
Trigger: ACCTCTGCCTCCCAGGTTCAAGCCTCCTGAGTAACT...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGATGTAATCCCAGTACTTaGGGAGGTGGAGGAGGGTGG +
Preference number: 3 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRCNPST*GGGGGW
Trigger: CCACCCTCCTCCACCTCCCAAAGTACTGGGATTACA...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAGCTTCCCCAGGGAAGTaGCTTGCTGGTAAACAAACG +
Preference number: 3 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSASPGK*LAGKQT
Trigger: CGTTTGTTTACCAGCAAGCAACTTCCCTGGGGAAGC...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGTCACATAGCCTTAAATaGCACCCCTGTTGCAATACT +
Preference number: 3 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLSHSLK*HPCCNT
Trigger: AGTATTGCAACAGGGGTGCAATTTAAGGCTATGTGA...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGCCTAGTGAGCCACACTaGAAATTTCACCACTTCATA +
Preference number: 3 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLPSEPH*KFHHFI
Trigger: TATGAAGTGGTGAAATTTCAAGTGTGGCTCACTAGG...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGTTGATACTTAGTTTTTaGGCCATGCATCTTGGCAGG +
Preference number: 3 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLLILSF*AMHLGR
Trigger: CCTGCCAAGATGCATGGCCAAAAAACTAAGTATCAA...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCACCCCAGGGAAGTTGCTaGCTGGTAAACAAACGAAAG +
Preference number: 3 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSPQGSC*LVNKRK
Trigger: CTTTCGTTTGTTTACCAGCAAGCAACTTCCCTGGGG...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAGCTTCCCCAGGGAAGTaGCTTGCTGGTAAACAAACG +
Preference number: 3 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKASPGK*LAGKQT
Trigger: CGTTTGTTTACCAGCAAGCAACTTCCCTGGGGAAGC...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGTTTATGAATATGTGTTaGGCTTCCCCAGGGAAGTTG +
Preference number: 3 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLFMNMC*ASPGKL
Trigger: CAACTTCCCTGGGGAAGCCAAACACATATTCATAAA...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAACTGTTGAGATTGCATaGCGTTCACTGATGGTGACC +
Preference number: 3 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSTVEIA*RSLMVT
Trigger: GGTCACCATCAGTGAACGCAATGCAATCTCAACAGT...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAACCCCAGGGAAGTTGCTaGCTGGTAAACAAACGAAAG +
Preference number: 3 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKPQGSC*LVNKRK
Trigger: CTTTCGTTTGTTTACCAGCAAGCAACTTCCCTGGGG...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAAGCTTTGCTGCCAGCTaGTTAACAGGAAAAGACCAC +
Preference number: 3 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKSFAAS*LTGKDH
Trigger: GTGGTCTTTTCCTGTTAACAAGCTGGCAGCAAAGCT...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR TCA 72 bp TTCGTCACTGAATTTCTGTCTCATTTCGGCACGAAATaGGAACCAACCCTGTATCATTTCCTGACATCCCAG +
Preference number: 3 (lower is better)
Translates to: FVTEFLSHFGTK*EPTLYHFLTSQ
Trigger: CTGGGATGTCAGGAAATGATACAGGGTTGGTTCTCATTTCGTGCCGAAATGAGACAGAAATTCAGTGACGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR CCA 72 bp TCAAATGTGGCATGTGACTGTGACTTTGTAGATGAGTaGAACCTCTGCCATAACTCTTTCTGCTCCCCAAAT +
Preference number: 3 (lower is better)
Translates to: SNVACDCDFVDE*NLCHNSFCSPN
Trigger: ATTTGGGGAGCAGAAAGAGTTATGGCAGAGGTTCCACTCATCTACAAAGTCACAGTCACATGCCACATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR CCA 72 bp CTTGATGGTAGGGAAATGCTACTTCATGAGAAAGCATaGTGCCCATCAACTCCAACAGTACCTGTATTTGCA +
Preference number: 3 (lower is better)
Translates to: LDGREMLLHEKA*CPSTPTVPVFA
Trigger: TGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAAGTAGCATTTCCCTACCATCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCACCTAGTGAGCCACACTaGAAATTTCACCACTTCATA +
Preference number: 3 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSPSEPH*KFHHFI
Trigger: TATGAAGTGGTGAAATTTCAAGTGTGGCTCACTAGG...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATTTGATACTTAGTTTTTaGGCCATGCATCTTGGCAGG +
Preference number: 3 (lower is better)
Translates to: VTFPLAFKATISEANVPYLILSF*AMHLGR
Trigger: CCTGCCAAGATGCATGGCCAAAAAACTAAGTATCAA...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAGGGCTGGGTGAGGGCTaGGTAATTAATGGAATTTTT +
Preference number: 3 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKGLGEG*VINGIF
Trigger: AAAAATTCCATTAATTACCAAGCCCTCACCCAGCCC...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAATCACATAGCCTTAAATaGCACCCCTGTTGCAATACT +
Preference number: 3 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKSHSLK*HPCCNT
Trigger: AGTATTGCAACAGGGGTGCAATTTAAGGCTATGTGA...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGACCTAGTGAGCCACACTaGAAATTTCACCACTTCATA +
Preference number: 3 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRPSEPH*KFHHFI
Trigger: TATGAAGTGGTGAAATTTCAAGTGTGGCTCACTAGG...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATGGCAGGAATGTAAGTTaGATTGACTGTGTTAACCTT +
Preference number: 3 (lower is better)
Translates to: VTFPLAFKATISEANVPYGRNVS*IDCVNL
Trigger: AAGGTTAACACAGTCAATCAAACTTACATTCCTGCC...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAGGCAGGAATGTAAGTTaGATTGACTGTGTTAACCTT +
Preference number: 3 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSGRNVS*IDCVNL
Trigger: AAGGTTAACACAGTCAATCAAACTTACATTCCTGCC...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAATTGATACTTAGTTTTTaGGCCATGCATCTTGGCAGG +
Preference number: 3 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKLILSF*AMHLGR
Trigger: CCTGCCAAGATGCATGGCCAAAAAACTAAGTATCAA...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATGTCTCCAAACTGACTTaGTCATTTTTGAAACTGCTG +
Preference number: 3 (lower is better)
Translates to: VTFPLAFKATISEANVPYVSKLT*SFLKLL
Trigger: CAGCAGTTTCAAAAATGACAAAGTCAGTTTGGAGAC...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAGGCAGGAATGTAAGTTaGATTGACTGTGTTAACCTT +
Preference number: 3 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRGRNVS*IDCVNL
Trigger: AAGGTTAACACAGTCAATCAAACTTACATTCCTGCC...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAGTCTCCAAACTGACTTaGTCATTTTTGAAACTGCTG +
Preference number: 3 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKVSKLT*SFLKLL
Trigger: CAGCAGTTTCAAAAATGACAAAGTCAGTTTGGAGAC...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCATACCAAGTCATTAGGTaGAACCATATGAAAGTGTCT +
Preference number: 3 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSYQVIR*NHMKVS
Trigger: AGACACTTTCATATGGTTCAACCTAATGACTTGGTA...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR-3UTR CAA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGATACCAAGTCATTAGGTaGAACCATATGAAAGTGTCT +
Preference number: 3 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRYQVIR*NHMKVS
Trigger: AGACACTTTCATATGGTTCAACCTAATGACTTGGTA...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR TCA 72 bp GAACCAATAGAGAGTAGTTTGAGCCCTAGGAGAATATaGATCAATACACTGTTGAGATTGCATTGCGTTCAC +
Preference number: 3 (lower is better)
Translates to: EPIESSLSPRRI*INTLLRLHCVH
Trigger: GTGAACGCAATGCAATCTCAACAGTGTATTGATTCATATTCTCCTAGGGCTCAAACTACTCTCTATTGGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR GCA 72 bp AACTGCTGTAAACATTCCTCTCAATGGAACAGCCTCTaGCCAACAAATAAAGTTCTCACTCTTGAAAGAAAC +
Preference number: 3 (lower is better)
Translates to: NCCKHSSQWNSL*PTNKVLTLERN
Trigger: GTTTCTTTCAAGAGTGAGAACTTTATTTGTTGGGCAGAGGCTGTTCCATTGAGAGGAATGTTTACAGCAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
3UTR TCA 72 bp ATATATTGTCGGTTACTCCATTGTAATCAAATCAGCTaGCTAATTGCTATCTGTACTGAGTTATCTGAGATC +
Preference number: 3 (lower is better)
Translates to: IYCRLLHCNQIS*LIAICTELSEI
Trigger: GATCTCAGATAACTCAGTACAGATAGCAATTAGTCAGCTGATTTGATTACAATGGAGTAACCGACAATATAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGCGGCCATGCACTGGCTaGGCGGCTGGAGGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLRPCTG*AAGGRG
Trigger: ACCACGGCCTCCAGCCGCCCAGCCAGTGCATGGCCG...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAGGCCCGCCCCTGAGGTaGGCGCAGCTCCTCGACGAG +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSGPPLR*AQLLDE
Trigger: CTCGTCGAGGAGCTGCGCTCACCTCAGGGGCGGGCC...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAGGCCCGCCCCTGAGGTaGGCGCAGCTCCTCGACGAG +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRGPPLR*AQLLDE
Trigger: CTCGTCGAGGAGCTGCGCTCACCTCAGGGGCGGGCC...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGCGCCCGCTCCGGAGCTaGAAATGGGGACAATCCCTG +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLRPLRS*KWGQSL
Trigger: CAGGGATTGTCCCCATTTCCAGCTCCGGAGCGGGCG...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCACGGCCATGCACTGGCTaGGCGGCTGGAGGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSRPCTG*AAGGRG
Trigger: ACCACGGCCTCCAGCCGCCCAGCCAGTGCATGGCCG...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATCGGCCATGCACTGGCTaGGCGGCTGGAGGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYRPCTG*AAGGRG
Trigger: ACCACGGCCTCCAGCCGCCCAGCCAGTGCATGGCCG...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGCTTTGTAGGGGTACGTaGGATGCAGAGGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLLCRGT*DAEGAG
Trigger: GCCAGCCCCCTCTGCATCTCACGTACCCCTACAAAG...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATGGCGTGTCTCGCCGCTaGTATGACGTCTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYGVSRR*YDVWVG
Trigger: CCCCACCCAGACGTCATATCAGCGGCGAGACACGCC...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAGGCGTGTCTCGCCGCTaGTATGACGTCTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSGVSRR*YDVWVG
Trigger: CCCCACCCAGACGTCATATCAGCGGCGAGACACGCC...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGGCTCCCCAGACTCAATaGTTCTTCCCAGCAGGACGG +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLAPQTQ*FFPAGR
Trigger: CCGTCCTGCTGGGAAGAAGCATTGAGTCTGGGGAGC...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCACAGTCTGTCCGGCCATaGACTGGCTGGGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSQSVRP*TGWAAG
Trigger: TCCAGCCGCCCAGCCAGTGCATGGCCGGACAGACTG...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATCAGTCTGTCCGGCCATaGACTGGCTGGGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYQSVRP*TGWAAG
Trigger: TCCAGCCGCCCAGCCAGTGCATGGCCGGACAGACTG...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGCTGGGAGGCAGAGGTTaGAGAGAGCTAAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLLGGRG*RELRSR
Trigger: GCGCGATCTTAGCTCTCTGCAACCTCTGCCTCCCAG...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATCACTGGCTGGGCGGCTaGAGGCCGTGGTATCAACCC +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYHWLGG*RPWYQP
Trigger: GGGTTGATACCACGGCCTCCAGCCGCCCAGCCAGTG...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCACACTGGCTGGGCGGCTaGAGGCCGTGGTATCAACCC +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSHWLGG*RPWYQP
Trigger: GGGTTGATACCACGGCCTCCAGCCGCCCAGCCAGTG...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGTGGAGATGGCTTGGGTaGTCTGTCCTGGAGACCTCT +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLWRWLG*SVLETS
Trigger: AGAGGTCTCCAGGACAGATCACCCAAGCCATCTCCA...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAGTCTCGCCGCTGATATaGCGTCTGGGTGGGGGCACT +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSVSPLI*RLGGGT
Trigger: AGTGCCCCCACCCAGACGTCATATCAGCGGCGAGAC...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAGGCGTGTCTCGCCGCTaGTATGACGTCTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRGVSRR*YDVWVG
Trigger: CCCCACCCAGACGTCATATCAGCGGCGAGACACGCC...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGCAGTCATCGCCGAGATaGGTACTTGGAAGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLQSSPR*VLGSPV
Trigger: GACTGGGCTTCCAAGTACGCATCTCGGCGATGACTG...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGCAGTTTTCCCTACTCTaGTGGCACTACCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLQFSLL*WHYLGH
Trigger: GTGCCCCAGGTAGTGCCAGCAGAGTAGGGAAAACTG...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGGGCTCCAGGGAAGAGTaGCCTGAGGGTGTAAACTTC +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLGSREE*PEGVNF
Trigger: GAAGTTTACACCCTCAGGCCACTCTTCCCTGGAGCC...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGCTGGGTGTGGAAGAATaGTCGCCCAGGATGAGGTCT +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLLGVEE*SPRMRS
Trigger: AGACCTCATCCTGGGCGACCATTCTTCCACACCCAG...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGGGAGTGCTTCTAGGCTaGGTGTGGAAGAATGGTCGC +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLGVLLG*VWKNGR
Trigger: GCGACCATTCTTCCACACCCAGCCTAGAAGCACTCC...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATGGCGGCTGGAGGCCGTaGTATCAACCCAGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYGGWRP*YQPRSA
Trigger: AGCACTCCTGGGTTGATACCACGGCCTCCAGCCGCC...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAACACTGGCTGGGCGGCTaGAGGCCGTGGTATCAACCC +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKHWLGG*RPWYQP
Trigger: GGGTTGATACCACGGCCTCCAGCCGCCCAGCCAGTG...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGGCTGCTCACCGACTGTaGATGCTTGTTGTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLAAHRL*MLVVEG
Trigger: TCCCTCCACAACAAGCATCCACAGTCGGTGAGCAGC...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350082.10
CDS-3UTR TCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATCTTTGTAGGGGTACGTaGGATGCAGAGGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYLCRGT*DAEGAG
Trigger: GCCAGCCCCCTCTGCATCTCACGTACCCCTACAAAG...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCACTTTGTAGGGGTACGTaGGATGCAGAGGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSLCRGT*DAEGAG
Trigger: GCCAGCCCCCTCTGCATCTCACGTACCCCTACAAAG...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAGTCTCGCCGCTGATATaGCGTCTGGGTGGGGGCACT +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKVSPLI*RLGGGT
Trigger: AGTGCCCCCACCCAGACGTCATATCAGCGGCGAGAC...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGGAAGTGGTTCAGTTCTaGAGTGGTAGCAGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLEVVQF*SGSSPP
Trigger: GGGAGGACTGCTACCACTGCAGAACTGAACCACTTC...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGTCTCAGGAGCTGGACTaGTTCACTGCTAGCATTGGG +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLSQELD*FTASIG
Trigger: CCCAATGCTAGCAGTGAAGCAGTCCAGCTCCTGAGA...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGTGTCCTGGAGACCTCTaGTTTGTAGGGGTACGTGAG +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLCPGDL*FVGVRE
Trigger: CTCACGTACCCCTACAAAGCAGAGGTCTCCAGGACA...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATGGGCACTGTTTCCTGTaGCCACAGGCTCAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYGHCFL*PQAQRA
Trigger: AGCCCTCTGAGCCTGTGGGCACAGGAAACAGTGCCC...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGACGCCCGCTCCGGAGCTaGAAATGGGGACAATCCCTG +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRRPLRS*KWGQSL
Trigger: CAGGGATTGTCCCCATTTCCAGCTCCGGAGCGGGCG...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGCTGGGCAGGTGGGACTaGCTTAATATAAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLLGRWD*LNIRRW
Trigger: CCACCTCCTTATATTAAGCCAGTCCCACCTGCCCAG...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGTGGTGGCTGGGCAGGTaGGACTGGCTTAATATAAGG +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLWWLGR*DWLNIR
Trigger: CCTTATATTAAGCCAGTCCCACCTGCCCAGCCACCA...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCATTCGTGTGTGTGGCTTaGCTGGTGGCTGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSFVCVA*LVAGQV
Trigger: CACCTGCCCAGCCACCAGCCAAGCCACACACACGAA...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATGCAGAGGGGGCTGGCTaGCTTGATGCTGTCGTGAAG +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYAEGAG*LDAVVK
Trigger: CTTCACGACAGCATCAAGCCAGCCAGCCCCCTCTGC...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAGCAGAGGGGGCTGGCTaGCTTGATGCTGTCGTGAAG +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSAEGAG*LDAVVK
Trigger: CTTCACGACAGCATCAAGCCAGCCAGCCCCCTCTGC...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGGAAAAGCAACGGGCTTaGCTTGTCCTCCTGGAGATG +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLEKQRA*LVLLEM
Trigger: CATCTCCAGGAGGACAAGCCAAGCCCGTTGCTTTTC...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATCTGCAGATCTCAGGGTaGGCGTGTCTCGCCGCTGAT +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYLQISG*ACLAAD
Trigger: ATCAGCGGCGAGACACGCCCACCCTGAGATCTGCAG...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAGCCGAGATGCGTACTTaGAAGCCCAGTCTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSAEMRT*KPSLSG
Trigger: GCCGGACAGACTGGGCTTCCAAGTACGCATCTCGGC...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGGGCTTGATGCTGTCGTaGAGAAATTCGTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLGLMLS*RNSCVW
Trigger: CCACACACACGAATTTCTTCACGACAGCATCAAGCC...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAATGGTCGCCCAGGATaGGGTCTCATGGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSNGRPG*GLMAFR
Trigger: CCTGAAGGCCATGAGACCTCATCCTGGGCGACCATT...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGAGAACACCAGTCAGCTaGGGGAAAGTATCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLRTPVS*GKVSCF
Trigger: GAAGCAGGATACTTTCCCTCAGCTGACTGGTGTTCT...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGTATCTATTCATGGTGTaGCTGCTCAGGCCGGACACT +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLYLFMV*LLRPDT
Trigger: AGTGTCCGGCCTGAGCAGGCACACCATGAATAGATA...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGGAAGGTTTTGTGTGGTaGTGCCTAGTGGGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLEGFVW*CLVGVQ
Trigger: TTGGACACCCACTAGGCAGCACCACACAAAACCTTC...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGATAAGGAGGTGGGCCTaGCTTTTCCAGGATGCCTTT +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLIRRWA*LFQDAF
Trigger: AAAGGCATCCTGGAAAAGGCAGGCCCACCTCCTTAT...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAGGGCACTGTTTCCTGTaGCCACAGGCTCAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRGHCFL*PQAQRA
Trigger: AGCCCTCTGAGCCTGTGGGCACAGGAAACAGTGCCC...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGATCTCACGGCCGAAGTaGTTCAGTTCTGCAGTGGTA +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLISRPK*FSSAVV
Trigger: TACCACTGCAGAACTGAACCACTTCGGCCGTGAGAT...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGATGTCTCTCAGGAGCTaGACTGCTTCACTGCTAGCA +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLMSLRS*TASLLA
Trigger: TGCTAGCAGTGAAGCAGTCCAGCTCCTGAGAGACAT...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGTGCCTGACTAGCTGTTaGTCGTTTCTTGGGATCCCA +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLCLTSC*SFLGIP
Trigger: TGGGATCCCAAGAAACGACCAACAGCTAGTCAGGCA...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAATTCGTGTGTGTGGCTTaGCTGGTGGCTGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKFVCVA*LVAGQV
Trigger: CACCTGCCCAGCCACCAGCCAAGCCACACACACGAA...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAGCAGAGGGGGCTGGCTaGCTTGATGCTGTCGTGAAG +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKAEGAG*LDAVVK
Trigger: CTTCACGACAGCATCAAGCCAGCCAGCCCCCTCTGC...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGTTGGGTGATCTGTCCTaGAGACCTCTGCTTTGTAGG +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLLGDLS*RPLLCR
Trigger: CCTACAAAGCAGAGGTCTCCAGGACAGATCACCCAA...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAACTGCAGATCTCAGGGTaGGCGTGTCTCGCCGCTGAT +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKLQISG*ACLAAD
Trigger: ATCAGCGGCGAGACACGCCCACCCTGAGATCTGCAG...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAAAATCAGTCTTCTGCTaGCGCCGCGAACGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRKSVFC*RRERRR
Trigger: CCGCCTGCGTTCGCGGCGCCAGCAGAAGACTGATTT...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350082.10
ENST00000676107.1
CDS-3UTR TCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGCATCCCCGAGCTGCCTaGTTGTTGTGTATCTATTCA +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLHPRAA*LLCIYS
Trigger: TGAATAGATACACAACAATCAGGCAGCTCGGGGATG...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATTGTAAACTTCTGCCATaGTGCAGCCCACCGCCCAGA +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYCKLLP*CSPPPR
Trigger: TCTGGGCGGTGGGCTGCATCATGGCAGAAGTTTACA...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCATGTAAACTTCTGCCATaGTGCAGCCCACCGCCCAGA +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSCKLLP*CSPPPR
Trigger: TCTGGGCGGTGGGCTGCATCATGGCAGAAGTTTACA...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATGGGGGCTGGCTGGCTTaGTGCTGTCGTGAAGAAATT +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYGGWLA*CCREEI
Trigger: AATTTCTTCACGACAGCATCAAGCCAGCCAGCCCCC...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAGGGGGCTGGCTGGCTTaGTGCTGTCGTGAAGAAATT +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSGGWLA*CCREEI
Trigger: AATTTCTTCACGACAGCATCAAGCCAGCCAGCCCCC...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATTGGAGATGGCTTGGGTaGTCTGTCCTGGAGACCTCT +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYWRWLG*SVLETS
Trigger: AGAGGTCTCCAGGACAGATCACCCAAGCCATCTCCA...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAAATGGTCGCCCAGGATaGGGTCTCATGGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRNGRPG*GLMAFR
Trigger: CCTGAAGGCCATGAGACCTCATCCTGGGCGACCATT...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAGCTCCCCAGACTCAATaGTTCTTCCCAGCAGGACGG +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKAPQTQ*FFPAGR
Trigger: CCGTCCTGCTGGGAAGAAGCATTGAGTCTGGGGAGC...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGCCTCCCGAAGGTTCATaGATTCCTCCCAGGAATAAA +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLPPEGS*IPPRNK
Trigger: TTTATTCCTGGGAGGAATGCATGAACCTTCGGGAGG...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATGAGGGTGTAAACTTCTaGCATGATGCAGCCCACCGC +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYEGVNF*HDAAHR
Trigger: GCGGTGGGCTGCATCATGGCAGAAGTTTACACCCTC...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGATTTTCGACTGTGGATaGTTGTTGTGGAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLIFDCG*LLWRDG
Trigger: CCCATCCCTCCACAACAAGCATCCACAGTCGAAAAT...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGGCTAGGTGTACCCTCTaGATAGCAGAACCGATTTCT +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLARCTL*IAEPIS
Trigger: AGAAATCGGTTCTGCTATGCAGAGGGTACACCTAGC...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGGATGAGTGGAACCTCTaGCATAACTCTTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLDEWNL*HNSFCS
Trigger: GGAGCAGAAAGAGTTATGGCAGAGGTTCCACTCATC...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGCTTCCCCAGGGAAGTTaGTTGCTGGTAAACAAACGA +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLLPQGS*LLVNKR
Trigger: TCGTTTGTTTACCAGCAAGCAACTTCCCTGGGGAAG...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATCAGTTTTCCCTACTCTaGTGGCACTACCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYQFSLL*WHYLGH
Trigger: GTGCCCCAGGTAGTGCCAGCAGAGTAGGGAAAACTG...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCACTCCGGAGCTGGAAATaGGGACAATCCCTGCTAGGA +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSLRSWK*GQSLLG
Trigger: TCCTAGCAGGGATTGTCCCCATTTCCAGCTCCGGAG...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAAAGGAATACTCTTCTTaGCGCCGCGAACGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKKEYSS*RRERRR
Trigger: CCGCCTGCGTTCGCGGCGCCAAGAAGAGTATTCCTT...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000356971.3
CDS-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAGGCTCCAGGGAAGAGTaGCCTGAGGGTGTAAACTTC +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSGSREE*PEGVNF
Trigger: GAAGTTTACACCCTCAGGCCACTCTTCCCTGGAGCC...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCACTCCTGGAGATGGCTTaGGTGATCTGTCCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSLLEMA*VICPGD
Trigger: GTCTCCAGGACAGATCACCCAAGCCATCTCCAGGAG...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATCTGGGTGTGGAAGAATaGTCGCCCAGGATGAGGTCT +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYLGVEE*SPRMRS
Trigger: AGACCTCATCCTGGGCGACCATTCTTCCACACCCAG...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATCTTCTAGGCTGGGTGTaGAAGAATGGTCGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYLLGWV*KNGRPG
Trigger: TCCTGGGCGACCATTCTTCCACACCCAGCCTAGAAG...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAGGAGTGCTTCTAGGCTaGGTGTGGAAGAATGGTCGC +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSGVLLG*VWKNGR
Trigger: GCGACCATTCTTCCACACCCAGCCTAGAAGCACTCC...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAGGGGGCTGGCTGGCTTaGTGCTGTCGTGAAGAAATT +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRGGWLA*CCREEI
Trigger: AATTTCTTCACGACAGCATCAAGCCAGCCAGCCCCC...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAATGGAGATGGCTTGGGTaGTCTGTCCTGGAGACCTCT +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKWRWLG*SVLETS
Trigger: AGAGGTCTCCAGGACAGATCACCCAAGCCATCTCCA...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGTGCCATTTCTTATACTaGTCCCAGGCAAGTATCGAG +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLCHFLY*SQASIE
Trigger: CTCGATACTTGCCTGGGATCAGTATAAGAAATGGCA...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGCCCTGTATCATTTCCTaGCATCCCAGTAAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLPCIIS*HPSKLS
Trigger: AGAAAGCTTACTGGGATGTCAGGAAATGATACAGGG...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATTATTCATGGTGTGCCTaGTCAGGCCGGACACTCATC +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYYSWCA*SGRTLI
Trigger: GATGAGTGTCCGGCCTGAGCAGGCACACCATGAATA...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAGAGGGTGTAAACTTCTaGCATGATGCAGCCCACCGC +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFREGVNF*HDAAHR
Trigger: GCGGTGGGCTGCATCATGGCAGAAGTTTACACCCTC...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAGAGGGTGTAAACTTCTaGCATGATGCAGCCCACCGC +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKEGVNF*HDAAHR
Trigger: GCGGTGGGCTGCATCATGGCAGAAGTTTACACCCTC...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATTCTCAGGAGCTGGACTaGTTCACTGCTAGCATTGGG +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYSQELD*FTASIG
Trigger: CCCAATGCTAGCAGTGAAGCAGTCCAGCTCCTGAGA...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCATGTCCTGGAGACCTCTaGTTTGTAGGGGTACGTGAG +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSCPGDL*FVGVRE
Trigger: CTCACGTACCCCTACAAAGCAGAGGTCTCCAGGACA...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGACAGTCATCGCCGAGATaGGTACTTGGAAGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRQSSPR*VLGSPV
Trigger: GACTGGGCTTCCAAGTACGCATCTCGGCGATGACTG...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAACAGTCATCGCCGAGATaGGTACTTGGAAGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKQSSPR*VLGSPV
Trigger: GACTGGGCTTCCAAGTACGCATCTCGGCGATGACTG...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGACAGTTTTCCCTACTCTaGTGGCACTACCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRQFSLL*WHYLGH
Trigger: GTGCCCCAGGTAGTGCCAGCAGAGTAGGGAAAACTG...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAACTCACCGACTGTGGATaGTTGTTGTGGAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKLTDCG*LLWRDG
Trigger: CCCATCCCTCCACAACAAGCATCCACAGTCGGTGAG...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350082.10
CDS-3UTR GCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATTTGGTGAATCTGGGCTaGTCACCGACTGTGGATGCT +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYLVNLG*SPTVDA
Trigger: AGCATCCACAGTCGGTGAGCAGCCCAGATTCACCAA...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350082.10
CDS-3UTR CCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGACTCCGGAGCTGGAAATaGGGACAATCCCTGCTAGGA +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRLRSWK*GQSLLG
Trigger: TCCTAGCAGGGATTGTCCCCATTTCCAGCTCCGGAG...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGAACCAGATTTTTCGATaGCAGCACCAGCACAAGGTA +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLNQIFR*QHQHKV
Trigger: TACCTTGTGCTGGTGCTGCCATCGAAAAATCTGGTT...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAGGCTCCAGGGAAGAGTaGCCTGAGGGTGTAAACTTC +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRGSREE*PEGVNF
Trigger: GAAGTTTACACCCTCAGGCCACTCTTCCCTGGAGCC...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATCCTGAAGGTTTTGTGTaGTGCTGCCTAGTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYPEGFV*CCLVGV
Trigger: GACACCCACTAGGCAGCACCACACAAAACCTTCAGG...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGCTTAATATAAGGAGGTaGGCCTGCCTTTTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLLNIRR*ACLFQD
Trigger: ATCCTGGAAAAGGCAGGCCCACCTCCTTATATTAAG...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATCTGGGCAGGTGGGACTaGCTTAATATAAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYLGRWD*LNIRRW
Trigger: CCACCTCCTTATATTAAGCCAGTCCCACCTGCCCAG...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAAGAAATTCGTGTGTGTaGCTTGGCTGGTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRRNSCV*LGWWLG
Trigger: GCCCAGCCACCAGCCAAGCCACACACACGAATTTCT...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAAGAAATTCGTGTGTGTaGCTTGGCTGGTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKRNSCV*LGWWLG
Trigger: GCCCAGCCACCAGCCAAGCCACACACACGAATTTCT...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGACTCCTGGAGATGGCTTaGGTGATCTGTCCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRLLEMA*VICPGD
Trigger: GTCTCCAGGACAGATCACCCAAGCCATCTCCAGGAG...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAACTCCTGGAGATGGCTTaGGTGATCTGTCCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKLLEMA*VICPGD
Trigger: GTCTCCAGGACAGATCACCCAAGCCATCTCCAGGAG...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATGAAAAGCAACGGGCTTaGCTTGTCCTCCTGGAGATG +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYEKQRA*LVLLEM
Trigger: CATCTCCAGGAGGACAAGCCAAGCCCGTTGCTTTTC...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAGATATGACGTCTGGGTaGGGGCACTGTTTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRDMTSG*GHCFLC
Trigger: GCACAGGAAACAGTGCCCCCACCCAGACGTCATATC...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAGATATGACGTCTGGGTaGGGGCACTGTTTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKDMTSG*GHCFLC
Trigger: GCACAGGAAACAGTGCCCCCACCCAGACGTCATATC...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAACTTCTAGGCTGGGTGTaGAAGAATGGTCGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKLLGWV*KNGRPG
Trigger: TCCTGGGCGACCATTCTTCCACACCCAGCCTAGAAG...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAGGAGTGCTTCTAGGCTaGGTGTGGAAGAATGGTCGC +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRGVLLG*VWKNGR
Trigger: GCGACCATTCTTCCACACCCAGCCTAGAAGCACTCC...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATGCTCCTAGCCAGATCTaGAGAACTGAGCTAGGCACA +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYAPSQI*RTELGT
Trigger: TGTGCCTAGCTCAGTTCTCCAGATCTGGCTAGGAGC...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATTCTGCTGGCACTACCTaGGGCACATCAATACCCCTA +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYSAGTT*GTSIPL
Trigger: TAGGGGTATTGATGTGCCCCAGGTAGTGCCAGCAGA...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCATTTTCCCTACTCTGCTaGCACTACCTGGGGCACATC +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSFSLLC*HYLGHI
Trigger: GATGTGCCCCAGGTAGTGCCAGCAGAGTAGGGAAAA...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGCTTCATGAGAAAGCATaGTGCCCATCAACTCCAACA +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLLHEKA*CPSTPT
Trigger: TGTTGGAGTTGATGGGCACCATGCTTTCTCATGAAG...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAATTCTTGGGATCCCACTaGAGCATGTCTCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKFLGSH*SMSLRS
Trigger: GCTCCTGAGAGACATGCTTCAGTGGGATCCCAAGAA...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGATTCTTGGGATCCCACTaGAGCATGTCTCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRFLGSH*SMSLRS
Trigger: GCTCCTGAGAGACATGCTTCAGTGGGATCCCAAGAA...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATAGAACACCAGTCAGCTaGGGGAAAGTATCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYRTPVS*GKVSCF
Trigger: GAAGCAGGATACTTTCCCTCAGCTGACTGGTGTTCT...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGCCATATAGAGATGGATaGGACTGGACCTTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLPYRDG*DWTFCL
Trigger: AAGACAAAAGGTCCAGTCTCATCCATCTCTATATGG...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAGCTGTGATTTTTGGTaGATCTGGGCTGCTCACCGA +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSSCDFW*IWAAHR
Trigger: TCGGTGAGCAGCCCAGATTCACCAAAAATCACAGCT...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350082.10
CDS-3UTR GCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAGAAGTGGTTCAGTTCTaGAGTGGTAGCAGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKEVVQF*SGSSPP
Trigger: GGGAGGACTGCTACCACTGCAGAACTGAACCACTTC...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAATATTCATGGTGTGCCTaGTCAGGCCGGACACTCATC +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKYSWCA*SGRTLI
Trigger: GATGAGTGTCCGGCCTGAGCAGGCACACCATGAATA...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCATATCTATTCATGGTGTaGCTGCTCAGGCCGGACACT +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSYLFMV*LLRPDT
Trigger: AGTGTCCGGCCTGAGCAGGCACACCATGAATAGATA...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAACAAGTTCTGGTCCCATaGAGAGGAGGTTCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKQVLVP*RGGSQA
Trigger: AGCCTGAGAACCTCCTCTGCATGGGACCAGAACTTG...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGACAAGTTCTGGTCCCATaGAGAGGAGGTTCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRQVLVP*RGGSQA
Trigger: AGCCTGAGAACCTCCTCTGCATGGGACCAGAACTTG...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGGGCCAAACCAAAGTCTaGAATTTTCACAAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLGQTKV*NFHKFW
Trigger: CCAGAACTTGTGAAAATTGCAGACTTTGGTTTGGCC...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAATCTCAGGAGCTGGACTaGTTCACTGCTAGCATTGGG +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKSQELD*FTASIG
Trigger: CCCAATGCTAGCAGTGAAGCAGTCCAGCTCCTGAGA...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAGGTTTTGTGTGGTGCTaGCTAGTGGGTGTCCAACTT +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSGFVWC*LVGVQL
Trigger: AAGTTGGACACCCACTAGGCAGCACCACACAAAACC...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAGAAGGTTTTGTGTGGTaGTGCCTAGTGGGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSEGFVW*CLVGVQ
Trigger: TTGGACACCCACTAGGCAGCACCACACAAAACCTTC...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAATAAGGAGGTGGGCCTaGCTTTTCCAGGATGCCTTT +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSIRRWA*LFQDAF
Trigger: AAAGGCATCCTGGAAAAGGCAGGCCCACCTCCTTAT...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGATGTCCTGGAGACCTCTaGTTTGTAGGGGTACGTGAG +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRCPGDL*FVGVRE
Trigger: CTCACGTACCCCTACAAAGCAGAGGTCTCCAGGACA...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGCACATAGCCTTAAATTaGACCCCTGTTGCAATACTG +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLHIALN*TPVAIL
Trigger: CAGTATTGCAACAGGGGTGCAATTTAAGGCTATGTG...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATATCTCACGGCCGAAGTaGTTCAGTTCTGCAGTGGTA +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYISRPK*FSSAVV
Trigger: TACCACTGCAGAACTGAACCACTTCGGCCGTGAGAT...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCATTGTGTATCTATTCATaGTGTGCCTGCTCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSLCIYS*CACSGR
Trigger: CCGGCCTGAGCAGGCACACCATGAATAGATACACAA...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATTTGTGTATCTATTCATaGTGTGCCTGCTCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYLCIYS*CACSGR
Trigger: CCGGCCTGAGCAGGCACACCATGAATAGATACACAA...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCATTGTGTCAATTTCACTaGCTCCAGGGAAGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSLCQFH*LQGRVA
Trigger: GGCCACTCTTCCCTGGAGCCAGTGAAATTGACACAA...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATTTGTGTCAATTTCACTaGCTCCAGGGAAGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYLCQFH*LQGRVA
Trigger: GGCCACTCTTCCCTGGAGCCAGTGAAATTGACACAA...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATATGTCTCTCAGGAGCTaGACTGCTTCACTGCTAGCA +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYMSLRS*TASLLA
Trigger: TGCTAGCAGTGAAGCAGTCCAGCTCCTGAGAGACAT...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCATGCCTGACTAGCTGTTaGTCGTTTCTTGGGATCCCA +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSCLTSC*SFLGIP
Trigger: TGGGATCCCAAGAAACGACCAACAGCTAGTCAGGCA...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATTGCCTGACTAGCTGTTaGTCGTTTCTTGGGATCCCA +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYCLTSC*SFLGIP
Trigger: TGGGATCCCAAGAAACGACCAACAGCTAGTCAGGCA...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGACCTGAAGGTTTTGTGTaGTGCTGCCTAGTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRPEGFV*CCLVGV
Trigger: GACACCCACTAGGCAGCACCACACAAAACCTTCAGG...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAATGGTGGCTGGGCAGGTaGGACTGGCTTAATATAAGG +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKWWLGR*DWLNIR
Trigger: CCTTATATTAAGCCAGTCCCACCTGCCCAGCCACCA...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATTTGGGTGATCTGTCCTaGAGACCTCTGCTTTGTAGG +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYLGDLS*RPLLCR
Trigger: CCTACAAAGCAGAGGTCTCCAGGACAGATCACCCAA...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAACTTGTTGTGGAGGGATaGGAAAAGCAACGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKLVVEG*EKQRAW
Trigger: CCAAGCCCGTTGCTTTTCCCATCCCTCCACAACAAG...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGACTTGTTGTGGAGGGATaGGAAAAGCAACGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRLVVEG*EKQRAW
Trigger: CCAAGCCCGTTGCTTTTCCCATCCCTCCACAACAAG...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCACAGGATGAGGTCTCATaGCCTTCAGGGAGGAATAAC +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSQDEVS*PSGRNN
Trigger: GTTATTCCTCCCTGAAGGCCATGAGACCTCATCCTG...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGATCTGCTGGCACTACCTaGGGCACATCAATACCCCTA +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRSAGTT*GTSIPL
Trigger: TAGGGGTATTGATGTGCCCCAGGTAGTGCCAGCAGA...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGATTTTCCCTACTCTGCTaGCACTACCTGGGGCACATC +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRFSLLC*HYLGHI
Trigger: GATGTGCCCCAGGTAGTGCCAGCAGAGTAGGGAAAA...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCACATCCCCGAGCTGCCTaGTTGTTGTGTATCTATTCA +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSHPRAA*LLCIYS
Trigger: TGAATAGATACACAACAATCAGGCAGCTCGGGGATG...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAGGCTTGATGCTGTCGTaGAGAAATTCGTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRGLMLS*RNSCVW
Trigger: CCACACACACGAATTTCTTCACGACAGCATCAAGCC...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAGGCTTGATGCTGTCGTaGAGAAATTCGTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKGLMLS*RNSCVW
Trigger: CCACACACACGAATTTCTTCACGACAGCATCAAGCC...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCACCAGATCTGGAGAACTaGGCTAGGCACAAAATTCCA +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSPDLEN*ARHKIP
Trigger: TGGAATTTTGTGCCTAGCTCAGTTCTCCAGATCTGG...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGAGCCCTAGGAGAATATaGATCAATACACTGTTGAGA +
Preference number: 4 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLSPRRI*INTLLR
Trigger: TCTCAACAGTGTATTGATTCATATTCTCCTAGGGCT...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAGTTCCATCCCCGAGCTaGCTGATTGTTGTGTATCTA +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSVPSPS*LIVVYL
Trigger: TAGATACACAACAATCAGGCAGCTCGGGGATGGAAC...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAGGTTTTGTGTGGTGCTaGCTAGTGGGTGTCCAACTT +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKGFVWC*LVGVQL
Trigger: AAGTTGGACACCCACTAGGCAGCACCACACAAAACC...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAGGTTTTGTGTGGTGCTaGCTAGTGGGTGTCCAACTT +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRGFVWC*LVGVQL
Trigger: AAGTTGGACACCCACTAGGCAGCACCACACAAAACC...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAGAAGGTTTTGTGTGGTaGTGCCTAGTGGGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKEGFVW*CLVGVQ
Trigger: TTGGACACCCACTAGGCAGCACCACACAAAACCTTC...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAATAAGGAGGTGGGCCTaGCTTTTCCAGGATGCCTTT +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRIRRWA*LFQDAF
Trigger: AAAGGCATCCTGGAAAAGGCAGGCCCACCTCCTTAT...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAGCTAGGTGTACCCTCTaGATAGCAGAACCGATTTCT +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSARCTL*IAEPIS
Trigger: AGAAATCGGTTCTGCTATGCAGAGGGTACACCTAGC...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATGCTAGGTGTACCCTCTaGATAGCAGAACCGATTTCT +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYARCTL*IAEPIS
Trigger: AGAAATCGGTTCTGCTATGCAGAGGGTACACCTAGC...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAATCTCACGGCCGAAGTaGTTCAGTTCTGCAGTGGTA +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKISRPK*FSSAVV
Trigger: TACCACTGCAGAACTGAACCACTTCGGCCGTGAGAT...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAATTGTGTATCTATTCATaGTGTGCCTGCTCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKLCIYS*CACSGR
Trigger: CCGGCCTGAGCAGGCACACCATGAATAGATACACAA...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGATTGTGTCAATTTCACTaGCTCCAGGGAAGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRLCQFH*LQGRVA
Trigger: GGCCACTCTTCCCTGGAGCCAGTGAAATTGACACAA...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATATTGGGTACACACTGTaGCCAACGGAAGTTCATTGC +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYIGYTL*PTEVHC
Trigger: GCAATGAACTTCCGTTGGCCACAGTGTGTACCCAAT...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAATTGGGTACACACTGTaGCCAACGGAAGTTCATTGC +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSIGYTL*PTEVHC
Trigger: GCAATGAACTTCCGTTGGCCACAGTGTGTACCCAAT...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAATGTCTCTCAGGAGCTaGACTGCTTCACTGCTAGCA +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRMSLRS*TASLLA
Trigger: TGCTAGCAGTGAAGCAGTCCAGCTCCTGAGAGACAT...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATCTGTTGGTCGTTTCTTaGGATCCCACTGAAGCATGT +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYLLVVS*DPTEAC
Trigger: ACATGCTTCAGTGGGATCCCAAGAAACGACCAACAG...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCACTGTTGGTCGTTTCTTaGGATCCCACTGAAGCATGT +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSLLVVS*DPTEAC
Trigger: ACATGCTTCAGTGGGATCCCAAGAAACGACCAACAG...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAATTGGGTGATCTGTCCTaGAGACCTCTGCTTTGTAGG +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKLGDLS*RPLLCR
Trigger: CCTACAAAGCAGAGGTCTCCAGGACAGATCACCCAA...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCATGTGGATGCTTGTTGTaGAGGGATGGGAAAAGCAAC +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSCGCLL*RDGKSN
Trigger: GTTGCTTTTCCCATCCCTCCACAACAAGCATCCACA...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATTGTGGATGCTTGTTGTaGAGGGATGGGAAAAGCAAC +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYCGCLL*RDGKSN
Trigger: GTTGCTTTTCCCATCCCTCCACAACAAGCATCCACA...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAATCAAATAGTGCTGCTTaGCTGCAGATCTCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKSNSAA*LQISGW
Trigger: CCACCCTGAGATCTGCAGCCAAGCAGCACTATTTGA...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAACAGGATGAGGTCTCATaGCCTTCAGGGAGGAATAAC +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKQDEVS*PSGRNN
Trigger: GTTATTCCTCCCTGAAGGCCATGAGACCTCATCCTG...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAACATCCCCGAGCTGCCTaGTTGTTGTGTATCTATTCA +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKHPRAA*LLCIYS
Trigger: TGAATAGATACACAACAATCAGGCAGCTCGGGGATG...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATTGCCATTTCTTATACTaGTCCCAGGCAAGTATCGAG +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYCHFLY*SQASIE
Trigger: CTCGATACTTGCCTGGGATCAGTATAAGAAATGGCA...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAACCAGATCTGGAGAACTaGGCTAGGCACAAAATTCCA +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKPDLEN*ARHKIP
Trigger: TGGAATTTTGTGCCTAGCTCAGTTCTCCAGATCTGG...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCACAGAACATTAGTCATTaGCTGCTCCTAGCCAGATCT +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSQNISH*LLLARS
Trigger: AGATCTGGCTAGGAGCAGTCAATGACTAATGTTCTG...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATCAGAACATTAGTCATTaGCTGCTCCTAGCCAGATCT +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYQNISH*LLLARS
Trigger: AGATCTGGCTAGGAGCAGTCAATGACTAATGTTCTG...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCACCCTGTATCATTTCCTaGCATCCCAGTAAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSPCIIS*HPSKLS
Trigger: AGAAAGCTTACTGGGATGTCAGGAAATGATACAGGG...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATCATTTCGGCACGAAATaGGAACCAACCCTGTATCAT +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYHFGTK*EPTLYH
Trigger: ATGATACAGGGTTGGTTCTCATTTCGTGCCGAAATG...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAGTTCCATCCCCGAGCTaGCTGATTGTTGTGTATCTA +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRVPSPS*LIVVYL
Trigger: TAGATACACAACAATCAGGCAGCTCGGGGATGGAAC...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGACCTCCCGAAGGTTCATaGATTCCTCCCAGGAATAAA +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRPPEGS*IPPRNK
Trigger: TTTATTCCTGGGAGGAATGCATGAACCTTCGGGAGG...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAACCTCCCGAAGGTTCATaGATTCCTCCCAGGAATAAA +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKPPEGS*IPPRNK
Trigger: TTTATTCCTGGGAGGAATGCATGAACCTTCGGGAGG...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAATTTTCGACTGTGGATaGTTGTTGTGGAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKIFDCG*LLWRDG
Trigger: CCCATCCCTCCACAACAAGCATCCACAGTCGAAAAT...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATATCTCACCATTTTTGTaGTCCAGGCCAGCTGTGATT +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYISPFL*SRPAVI
Trigger: AATCACAGCTGGCCTGGAGCACAAAAATGGTGAGAT...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAGATGAGTGGAACCTCTaGCATAACTCTTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKDEWNL*HNSFCS
Trigger: GGAGCAGAAAGAGTTATGGCAGAGGTTCCACTCATC...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCATCCACATCCATTATGTaGTTTTCTCATGCCCCTAGG +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSSTSIM*FSHAPR
Trigger: CCTAGGGGCATGAGAAAAGCACATAATGGATGTGGA...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATTCCACATCCATTATGTaGTTTTCTCATGCCCCTAGG +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYSTSIM*FSHAPR
Trigger: CCTAGGGGCATGAGAAAAGCACATAATGGATGTGGA...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGACTTCCCCAGGGAAGTTaGTTGCTGGTAAACAAACGA +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRLPQGS*LLVNKR
Trigger: TCGTTTGTTTACCAGCAAGCAACTTCCCTGGGGAAG...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAACCAGATTTTTCGATaGCAGCACCAGCACAAGGTA +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSNQIFR*QHQHKV
Trigger: TACCTTGTGCTGGTGCTGCCATCGAAAAATCTGGTT...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATAACCAGATTTTTCGATaGCAGCACCAGCACAAGGTA +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYNQIFR*QHQHKV
Trigger: TACCTTGTGCTGGTGCTGCCATCGAAAAATCTGGTT...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCATGTGATTTTCGACTGTaGATGCTTGTTGTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSCDFRL*MLVVEG
Trigger: TCCCTCCACAACAAGCATCCACAGTCGAAAATCACA...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATAAACATTCCTCTCAATaGAACAGCCTCTGCCCAACA +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYKHSSQ*NSLCPT
Trigger: TGTTGGGCAGAGGCTGTTCCATTGAGAGGAATGTTT...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATTGCTTTCCAGCAAGCTaGGCCAGGTTTCACATTAAT +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYCFPAS*ARFHIN
Trigger: ATTAATGTGAAACCTGGCCCAGCTTGCTGGAAAGCA...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCACTTCATGAGAAAGCATaGTGCCCATCAACTCCAACA +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSLHEKA*CPSTPT
Trigger: TGTTGGAGTTGATGGGCACCATGCTTTCTCATGAAG...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATCTTCATGAGAAAGCATaGTGCCCATCAACTCCAACA +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYLHEKA*CPSTPT
Trigger: TGTTGGAGTTGATGGGCACCATGCTTTCTCATGAAG...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATAAGAAGCCGTGTTTGTaGATAAATGCGAGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYKKPCL*INASPC
Trigger: ACAAGGACTCGCATTTATTCACAAACACGGCTTCTT...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATTGTATATGGAGGTTTTaGTCGTATTTCTCGGGCCAA +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYCIWRF*SYFSGQ
Trigger: TTGGCCCGAGAAATACGATCAAAACCTCCATATACA...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAGAAGTTCATTGCACTTaGAAGTTGATAGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSEVHCT*KLIAFR
Trigger: CCTGAAGGCTATCAACTTTCAAGTGCAATGAACTTC...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAATGCCATTTCTTATACTaGTCCCAGGCAAGTATCGAG +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKCHFLY*SQASIE
Trigger: CTCGATACTTGCCTGGGATCAGTATAAGAAATGGCA...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGACCCTGTATCATTTCCTaGCATCCCAGTAAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRPCIIS*HPSKLS
Trigger: AGAAAGCTTACTGGGATGTCAGGAAATGATACAGGG...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGACATTTCGGCACGAAATaGGAACCAACCCTGTATCAT +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRHFGTK*EPTLYH
Trigger: ATGATACAGGGTTGGTTCTCATTTCGTGCCGAAATG...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAGGCCAAACCAAAGTCTaGAATTTTCACAAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSGQTKV*NFHKFW
Trigger: CCAGAACTTGTGAAAATTGCAGACTTTGGTTTGGCC...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAATCTCACCATTTTTGTaGTCCAGGCCAGCTGTGATT +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKISPFL*SRPAVI
Trigger: AATCACAGCTGGCCTGGAGCACAAAAATGGTGAGAT...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAACACTCTCAAACCTaGAGAGAGTGTCATCACTCT +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSKHSQT*RECHHS
Trigger: AGAGTGATGACACTCTCTGCAGGTTTGAGAGTGTTT...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATCACATAGCCTTAAATTaGACCCCTGTTGCAATACTG +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYHIALN*TPVAIL
Trigger: CAGTATTGCAACAGGGGTGCAATTTAAGGCTATGTG...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATCAATGGAACAGCCTCTaGCCAACAAATAAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYQWNSL*PTNKVL
Trigger: GAGAACTTTATTTGTTGGGCAGAGGCTGTTCCATTG...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCACAATGGAACAGCCTCTaGCCAACAAATAAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSQWNSL*PTNKVL
Trigger: GAGAACTTTATTTGTTGGGCAGAGGCTGTTCCATTG...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGATCCACATCCATTATGTaGTTTTCTCATGCCCCTAGG +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRSTSIM*FSHAPR
Trigger: CCTAGGGGCATGAGAAAAGCACATAATGGATGTGGA...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAGGTGTCCCCAGCACTTaGCAAATTTTGAATATTGTG +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSGVPST*QILNIV
Trigger: CACAATATTCAAAATTTGCCAAGTGCTGGGGACACC...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAGGTCTTTAAGTTATTaGGTACACACTGTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSRSLSY*VHTVAN
Trigger: GTTGGCCACAGTGTGTACCCAATAACTTAAAGACCT...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATAGGTCTTTAAGTTATTaGGTACACACTGTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYRSLSY*VHTVAN
Trigger: GTTGGCCACAGTGTGTACCCAATAACTTAAAGACCT...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGACTTAATATAAGGAGGTaGGCCTGCCTTTTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRLNIRR*ACLFQD
Trigger: ATCCTGGAAAAGGCAGGCCCACCTCCTTATATTAAG...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAACTTAATATAAGGAGGTaGGCCTGCCTTTTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKLNIRR*ACLFQD
Trigger: ATCCTGGAAAAGGCAGGCCCACCTCCTTATATTAAG...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGATGTGATTTTCGACTGTaGATGCTTGTTGTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRCDFRL*MLVVEG
Trigger: TCCCTCCACAACAAGCATCCACAGTCGAAAATCACA...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATAGACCATGGATTAGGTaGAATAAATTCCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYRPWIR*NKFLAW
Trigger: CCAGGCAAGGAATTTATTCCACCTAATCCATGGTCT...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAGACTTTGTAGATGAGTaGAACCTCTGCCATAACTCT +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSDFVDE*NLCHNS
Trigger: AGAGTTATGGCAGAGGTTCCACTCATCTACAAAGTC...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATGCCCTTTGGAAGCCATaGTTATTTGTTCAGAATGCA +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYALWKP*LFVQNA
Trigger: TGCATTCTGAACAAATAACCATGGCTTCCAAAGGGC...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAGCCCTTTGGAAGCCATaGTTATTTGTTCAGAATGCA +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSALWKP*LFVQNA
Trigger: TGCATTCTGAACAAATAACCATGGCTTCCAAAGGGC...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAAAGAAGCCGTGTTTGTaGATAAATGCGAGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKKKPCL*INASPC
Trigger: ACAAGGACTCGCATTTATTCACAAACACGGCTTCTT...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGATGTATATGGAGGTTTTaGTCGTATTTCTCGGGCCAA +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRCIWRF*SYFSGQ
Trigger: TTGGCCCGAGAAATACGATCAAAACCTCCATATACA...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAATGTATATGGAGGTTTTaGTCGTATTTCTCGGGCCAA +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKCIWRF*SYFSGQ
Trigger: TTGGCCCGAGAAATACGATCAAAACCTCCATATACA...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAGAAGTTCATTGCACTTaGAAGTTGATAGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKEVHCT*KLIAFR
Trigger: CCTGAAGGCTATCAACTTTCAAGTGCAATGAACTTC...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGACCATATAGAGATGGATaGGACTGGACCTTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRPYRDG*DWTFCL
Trigger: AAGACAAAAGGTCCAGTCTCATCCATCTCTATATGG...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATAGCCCTAGGAGAATATaGATCAATACACTGTTGAGA +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYSPRRI*INTLLR
Trigger: TCTCAACAGTGTATTGATTCATATTCTCCTAGGGCT...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATCTTTCTGACTGTAAATaGGGTATAGTCCTGATAGGT +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYLSDCK*GIVLIG
Trigger: ACCTATCAGGACTATACCTCATTTACAGTCAGAAAG...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATCAAAAATCAGTCTTCTaGCTTAGAGAAATCCATCCC +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYQKSVF*LREIHP
Trigger: GGGATGGATTTCTCTAAGGCAGAAGACTGATTTTTG...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356971.3
CDS-3UTR GCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAGGCCAAACCAAAGTCTaGAATTTTCACAAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKGQTKV*NFHKFW
Trigger: CCAGAACTTGTGAAAATTGCAGACTTTGGTTTGGCC...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAAAACACTCTCAAACCTaGAGAGAGTGTCATCACTCT +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRKHSQT*RECHHS
Trigger: AGAGTGATGACACTCTCTGCAGGTTTGAGAGTGTTT...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAGGTGTCCCCAGCACTTaGCAAATTTTGAATATTGTG +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKGVPST*QILNIV
Trigger: CACAATATTCAAAATTTGCCAAGTGCTGGGGACACC...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAAGGTCTTTAAGTTATTaGGTACACACTGTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRRSLSY*VHTVAN
Trigger: GTTGGCCACAGTGTGTACCCAATAACTTAAAGACCT...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAAGACCATGGATTAGGTaGAATAAATTCCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRRPWIR*NKFLAW
Trigger: CCAGGCAAGGAATTTATTCCACCTAATCCATGGTCT...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAAGACCATGGATTAGGTaGAATAAATTCCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKRPWIR*NKFLAW
Trigger: CCAGGCAAGGAATTTATTCCACCTAATCCATGGTCT...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAGACTTTGTAGATGAGTaGAACCTCTGCCATAACTCT +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRDFVDE*NLCHNS
Trigger: AGAGTTATGGCAGAGGTTCCACTCATCTACAAAGTC...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAGCCCTTTGGAAGCCATaGTTATTTGTTCAGAATGCA +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRALWKP*LFVQNA
Trigger: TGCATTCTGAACAAATAACCATGGCTTCCAAAGGGC...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGATCATGTAACAAGAAATaGCTGCAGGTTCTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRSCNKK*LQVLSQ
Trigger: CTGACTGAGAACCTGCAGCCATTTCTTGTTACATGA...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAGGGTCTTGCTTAAGTaGTTTTCTGAATTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSRVLLK*FSEFFS
Trigger: CGAGAAGAATTCAGAAAACCACTTAAGCAAGACCCT...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATAGGGTCTTGCTTAAGTaGTTTTCTGAATTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYRVLLK*FSEFFS
Trigger: CGAGAAGAATTCAGAAAACCACTTAAGCAAGACCCT...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATGGTCATACACTGAACTaGAATGTACAGCATAAATTC +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYGHTLN*NVQHKF
Trigger: GAATTTATGCTGTACATTTCAGTTCAGTGTATGACC...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGATTTCTGAAGCTTTGCTaGCAGCTTGTTAACAGGAAA +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRFLKLC*QLVNRK
Trigger: TTTCCTGTTAACAAGCTGGCAGCAAAGCTTCAGAAA...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCATTGACTACATTGGCATaGTTGAGCTTCTTTAAAGAC +
Preference number: 4 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSLTTLA*LSFFKD
Trigger: GTCTTTAAAGAAGCTCAACCATGCCAATGTAGTCAA...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATTTGACTACATTGGCATaGTTGAGCTTCTTTAAAGAC +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYLTTLA*LSFFKD
Trigger: GTCTTTAAAGAAGCTCAACCATGCCAATGTAGTCAA...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATAATAAATTCCTTGCCTaGATTCGAGAGTATGCCATT +
Preference number: 4 (lower is better)
Translates to: VTFPLAFKATISEANVPYNKFLA*IREYAI
Trigger: AATGGCATACTCTCGAATCCAGGCAAGGAATTTATT...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAAGGGTCTTGCTTAAGTaGTTTTCTGAATTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRRVLLK*FSEFFS
Trigger: CGAGAAGAATTCAGAAAACCACTTAAGCAAGACCCT...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAAATATCTGCACACACTaGGTAAATAACCCTCTATCA +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRNICTH*VNNPLS
Trigger: TGATAGAGGGTTATTTACTCAGTGTGTGCAGATATT...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAGGTCATACACTGAACTaGAATGTACAGCATAAATTC +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKGHTLN*NVQHKF
Trigger: GAATTTATGCTGTACATTTCAGTTCAGTGTATGACC...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR TCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAGGTCATACACTGAACTaGAATGTACAGCATAAATTC +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRGHTLN*NVQHKF
Trigger: GAATTTATGCTGTACATTTCAGTTCAGTGTATGACC...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAATTGACTACATTGGCATaGTTGAGCTTCTTTAAAGAC +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKLTTLA*LSFFKD
Trigger: GTCTTTAAAGAAGCTCAACCATGCCAATGTAGTCAA...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAAATAAATTCCTTGCCTaGATTCGAGAGTATGCCATT +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRNKFLA*IREYAI
Trigger: AATGGCATACTCTCGAATCCAGGCAAGGAATTTATT...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAAATAAATTCCTTGCCTaGATTCGAGAGTATGCCATT +
Preference number: 4 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKNKFLA*IREYAI
Trigger: AATGGCATACTCTCGAATCCAGGCAAGGAATTTATT...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAAGGGATCATGGTGCTTaGTCAAGTATATATTTGAGT +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRRDHGA*SSIYLS
Trigger: ACTCAAATATATACTTGACCAAGCACCATGATCCCT...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR GCA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGATATAAAGTGTTGATTTaGTTTTATGCCCTCTGCACA +
Preference number: 4 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRYKVLI*FYALCT
Trigger: TGTGCAGAGGGCATAAAAGCAAATCAACACTTTATA...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CCA 90 bp GCTCCTCGACGAGCGGGGCGCAGCCGCCCGCTCCGGAGCTGGAAATaGGGACAATCCCTGCTAGGACCGGCCGAGGGCTCCGTACAGGGA +
Preference number: 5 (lower is better)
Translates to: APRRAGRSRPLRSWK*GQSLLGPAEGSVQG
Trigger: TCCCTGTACGGAGCCCTCGGCCGGTCCTAGCAGGGATTGTCCCCATTTCCAGCTCCGGAGCGGGCGGCTGCGCCCCGCTCGTCGAGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CCA 90 bp AGCGCAGCTCCTCGACGAGCGGGGCGCAGCCGCCCGCTCCGGAGCTaGAAATGGGGACAATCCCTGCTAGGACCGGCCGAGGGCTCCGTA +
Preference number: 5 (lower is better)
Translates to: SAAPRRAGRSRPLRS*KWGQSLLGPAEGSV
Trigger: TACGGAGCCCTCGGCCGGTCCTAGCAGGGATTGTCCCCATTTCCAGCTCCGGAGCGGGCGGCTGCGCCCCGCTCGTCGAGGAGCTGCGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS GCA 90 bp AGTCATCGCCGAGATGCGTACTTGGAAGCCCAGTCTGTCCGGCCATaGACTGGCTGGGCGGCTGGAGGCCGTGGTATCAACCCAGGAGTG +
Preference number: 5 (lower is better)
Translates to: SHRRDAYLEAQSVRP*TGWAAGGRGINPGV
Trigger: CACTCCTGGGTTGATACCACGGCCTCCAGCCGCCCAGCCAGTGCATGGCCGGACAGACTGGGCTTCCAAGTACGCATCTCGGCGATGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CCA 90 bp AGCCCAGTCTGTCCGGCCATGCACTGGCTGGGCGGCTGGAGGCCGTaGTATCAACCCAGGAGTGCTTCTAGGCTGGGTGTGGAAGAATGG +
Preference number: 5 (lower is better)
Translates to: SPVCPAMHWLGGWRP*YQPRSASRLGVEEW
Trigger: CCATTCTTCCACACCCAGCCTAGAAGCACTCCTGGGTTGATACCACGGCCTCCAGCCGCCCAGCCAGTGCATGGCCGGACAGACTGGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS TCA 90 bp CTGCTTGGCTGCAGATCTCAGGGTGGGCGTGTCTCGCCGCTGATATaGCGTCTGGGTGGGGGCACTGTTTCCTGTGCCCACAGGCTCAGA +
Preference number: 5 (lower is better)
Translates to: LLGCRSQGGRVSPLI*RLGGGTVSCAHRLR
Trigger: TCTGAGCCTGTGGGCACAGGAAACAGTGCCCCCACCCAGACGTCATATCAGCGGCGAGACACGCCCACCCTGAGATCTGCAGCCAAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CCA 90 bp CAGATCTCAGGGTGGGCGTGTCTCGCCGCTGATATGACGTCTGGGTaGGGGCACTGTTTCCTGTGCCCACAGGCTCAGAGGGCTTCAGGT +
Preference number: 5 (lower is better)
Translates to: QISGWACLAADMTSG*GHCFLCPQAQRASG
Trigger: ACCTGAAGCCCTCTGAGCCTGTGGGCACAGGAAACAGTGCCCCCACCCAGACGTCATATCAGCGGCGAGACACGCCCACCCTGAGATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS TCA 90 bp GGGGTACGTGAGATGCAGAGGGGGCTGGCTGGCTTGATGCTGTCGTaGAGAAATTCGTGTGTGTGGCTTGGCTGGTGGCTGGGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: GVREMQRGLAGLMLS*RNSCVWLGWWLGRW
Trigger: CCACCTGCCCAGCCACCAGCCAAGCCACACACACGAATTTCTTCACGACAGCATCAAGCCAGCCAGCCCCCTCTGCATCTCACGTACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CCA 90 bp AGAGATTCATCACCAAGGCAGACAGTCATCGCCGAGATGCGTACTTaGAAGCCCAGTCTGTCCGGCCATGCACTGGCTGGGCGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: RDSSPRQTVIAEMRT*KPSLSGHALAGRLE
Trigger: CTCCAGCCGCCCAGCCAGTGCATGGCCGGACAGACTGGGCTTCCAAGTACGCATCTCGGCGATGACTGTCTGCCTTGGTGATGAATCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS GCA 90 bp CTTGTCCTCCTGGAGATGGCTTGGGTGATCTGTCCTGGAGACCTCTaGTTTGTAGGGGTACGTGAGATGCAGAGGGGGCTGGCTGGCTTG +
Preference number: 5 (lower is better)
Translates to: LVLLEMAWVICPGDL*FVGVREMQRGLAGL
Trigger: CAAGCCAGCCAGCCCCCTCTGCATCTCACGTACCCCTACAAAGCAGAGGTCTCCAGGACAGATCACCCAAGCCATCTCCAGGAGGACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS GCA 90 bp TGTCTCGCCGCTGATATGACGTCTGGGTGGGGGCACTGTTTCCTGTaGCCACAGGCTCAGAGGGCTTCAGGTCCAAAACACTCTCAAACC +
Preference number: 5 (lower is better)
Translates to: CLAADMTSGWGHCFL*PQAQRASGPKHSQT
Trigger: GGTTTGAGAGTGTTTTGGACCTGAAGCCCTCTGAGCCTGTGGGCACAGGAAACAGTGCCCCCACCCAGACGTCATATCAGCGGCGAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CCA 90 bp ATCGAGAGTGCTTCAAATAGTGCTGCTTGGCTGCAGATCTCAGGGTaGGCGTGTCTCGCCGCTGATATGACGTCTGGGTGGGGGCACTGT +
Preference number: 5 (lower is better)
Translates to: IESASNSAAWLQISG*ACLAADMTSGWGHC
Trigger: ACAGTGCCCCCACCCAGACGTCATATCAGCGGCGAGACACGCCCACCCTGAGATCTGCAGCCAAGCAGCACTATTTGAAGCACTCTCGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS GCA 90 bp AATTTCACTGGCTCCAGGGAAGAGTGGCCTGAGGGTGTAAACTTCTaGCATGATGCAGCCCACCGCCCAGACGTCAATGGGGGAGCTGTA +
Preference number: 5 (lower is better)
Translates to: NFTGSREEWPEGVNF*HDAAHRPDVNGGAV
Trigger: TACAGCTCCCCCATTGACGTCTGGGCGGTGGGCTGCATCATGGCAGAAGTTTACACCCTCAGGCCACTCTTCCCTGGAGCCAGTGAAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CCA 90 bp CGACTGTGGATGCTTGTTGTGGAGGGATGGGAAAAGCAACGGGCTTaGCTTGTCCTCCTGGAGATGGCTTGGGTGATCTGTCCTGGAGAC +
Preference number: 5 (lower is better)
Translates to: RLWMLVVEGWEKQRA*LVLLEMAWVICPGD
Trigger: GTCTCCAGGACAGATCACCCAAGCCATCTCCAGGAGGACAAGCCAAGCCCGTTGCTTTTCCCATCCCTCCACAACAAGCATCCACAGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CCA 90 bp CCGTGGTATCAACCCAGGAGTGCTTCTAGGCTGGGTGTGGAAGAATaGTCGCCCAGGATGAGGTCTCATGGCCTTCAGGGAGGAATAACC +
Preference number: 5 (lower is better)
Translates to: PWYQPRSASRLGVEE*SPRMRSHGLQGGIT
Trigger: GGTTATTCCTCCCTGAAGGCCATGAGACCTCATCCTGGGCGACCATTCTTCCACACCCAGCCTAGAAGCACTCCTGGGTTGATACCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS TCA 90 bp TTCTTCCCAGCAGGACGGAACCGTAGGTTCCATCCCCGAGCTGCCTaGTTGTTGTGTATCTATTCATGGTGTGCCTGCTCAGGCCGGACA +
Preference number: 5 (lower is better)
Translates to: FFPAGRNRRFHPRAA*LLCIYSWCACSGRT
Trigger: TGTCCGGCCTGAGCAGGCACACCATGAATAGATACACAACAATCAGGCAGCTCGGGGATGGAACCTACGGTTCCGTCCTGCTGGGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS GCA 90 bp GTTCCATCCCCGAGCTGCCTGATTGTTGTGTATCTATTCATGGTGTaGCTGCTCAGGCCGGACACTCATCTCACGGCCGAAGTGGTTCAG +
Preference number: 5 (lower is better)
Translates to: VPSPSCLIVVYLFMV*LLRPDTHLTAEVVQ
Trigger: CTGAACCACTTCGGCCGTGAGATGAGTGTCCGGCCTGAGCAGGCACACCATGAATAGATACACAACAATCAGGCAGCTCGGGGATGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CCA 90 bp CAGGCCAGCTGTGATTTTCGACTGTGGATGCTTGTTGTGGAGGGATaGGAAAAGCAACGGGCTTGGCTTGTCCTCCTGGAGATGGCTTGG +
Preference number: 5 (lower is better)
Translates to: QASCDFRLWMLVVEG*EKQRAWLVLLEMAW
Trigger: CCAAGCCATCTCCAGGAGGACAAGCCAAGCCCGTTGCTTTTCCCATCCCTCCACAACAAGCATCCACAGTCGAAAATCACAGCTGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356971.3
ENST00000676107.1
CDS GCA 90 bp CTGCTCAGGCCGGACACTCATCTCACGGCCGAAGTGGTTCAGTTCTaGAGTGGTAGCAGTCCTCCCCAGAGTGTAACCAGATTTTTCGAT +
Preference number: 5 (lower is better)
Translates to: LLRPDTHLTAEVVQF*SGSSPPQSVTRFFD
Trigger: ATCGAAAAATCTGGTTACACTCTGGGGAGGACTGCTACCACTGCAGAACTGAACCACTTCGGCCGTGAGATGAGTGTCCGGCCTGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS GCA 90 bp CCAGCTGTGATTTTTGGTGAATCTGGGCTGCTCACCGACTGTGGATaGTTGTTGTGGAGGGATGGGAAAAGCAACGGGCTTGGCTTGTCC +
Preference number: 5 (lower is better)
Translates to: PAVIFGESGLLTDCG*LLWRDGKSNGLGLS
Trigger: GGACAAGCCAAGCCCGTTGCTTTTCCCATCCCTCCACAACAAGCATCCACAGTCGGTGAGCAGCCCAGATTCACCAAAAATCACAGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350082.10
CDS-3UTR CAA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGATTCGTGTGTGTGGCTaGGCTGGTGGCTGGGCAGGT +
Preference number: 5 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLIRVCG*AGGWAG
Trigger: ACCTGCCCAGCCACCAGCCAAGCCACACACACGAAT...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CCA 90 bp ATTTTTGGTGAATCTGGGCTGCTCACCGACTGTGGATGCTTGTTGTaGAGGGATGGGAAAAGCAACGGGCTTGGCTTGTCCTCCTGGAGA +
Preference number: 5 (lower is better)
Translates to: IFGESGLLTDCGCLL*RDGKSNGLGLSSWR
Trigger: TCTCCAGGAGGACAAGCCAAGCCCGTTGCTTTTCCCATCCCTCCACAACAAGCATCCACAGTCGGTGAGCAGCCCAGATTCACCAAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350082.10
CDS-3UTR CAA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGAGCAACGGGCTTGGCTaGTCCTCCTGGAGATGGCTT +
Preference number: 5 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLSNGLG*SSWRWL
Trigger: AAGCCATCTCCAGGAGGACAAGCCAAGCCCGTTGCT...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATCGCCGAGATGCGTACTaGGAAGCCCAGTCTGTCCGG +
Preference number: 5 (lower is better)
Translates to: VTFPLAFKATISEANVPYRRDAY*EAQSVR
Trigger: CCGGACAGACTGGGCTTCCAAGTACGCATCTCGGCG...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCACGCCGAGATGCGTACTaGGAAGCCCAGTCTGTCCGG +
Preference number: 5 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSRRDAY*EAQSVR
Trigger: CCGGACAGACTGGGCTTCCAAGTACGCATCTCGGCG...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGAGTTACTCAGGAGGCTaGAACCTGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLSYSGG*NLGGRG
Trigger: ACCTCTGCCTCCCAGGTTCAAGCCTCCTGAGTAACT...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAATTCGTGTGTGTGGCTaGGCTGGTGGCTGGGCAGGT +
Preference number: 5 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSIRVCG*AGGWAG
Trigger: ACCTGCCCAGCCACCAGCCAAGCCACACACACGAAT...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGGACTGTGGATGCTTGTaGTGGAGGGATGGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLDCGCL*WRDGKS
Trigger: GCTTTTCCCATCCCTCCACAACAAGCATCCACAGTC...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAACGCCGAGATGCGTACTaGGAAGCCCAGTCTGTCCGG +
Preference number: 5 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKRRDAY*EAQSVR
Trigger: CCGGACAGACTGGGCTTCCAAGTACGCATCTCGGCG...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAATTCGTGTGTGTGGCTaGGCTGGTGGCTGGGCAGGT +
Preference number: 5 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRIRVCG*AGGWAG
Trigger: ACCTGCCCAGCCACCAGCCAAGCCACACACACGAAT...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATCCTCCTGGAGATGGCTaGGGTGATCTGTCCTGGAGA +
Preference number: 5 (lower is better)
Translates to: VTFPLAFKATISEANVPYPPGDG*GDLSWR
Trigger: TCTCCAGGACAGATCACCCAAGCCATCTCCAGGAGG...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCACCTCCTGGAGATGGCTaGGGTGATCTGTCCTGGAGA +
Preference number: 5 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSPPGDG*GDLSWR
Trigger: TCTCCAGGACAGATCACCCAAGCCATCTCCAGGAGG...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGCCCCAGGGAAGTTGCTaGCTGGTAAACAAACGAAAG +
Preference number: 5 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLPQGSC*LVNKRK
Trigger: CTTTCGTTTGTTTACCAGCAAGCAACTTCCCTGGGG...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAAAAGGAATACTCTTCTaGGCGCCGCGAACGCAGGCG +
Preference number: 5 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKKGILF*APRTQA
Trigger: CGCCTGCGTTCGCGGCGCCAAGAAGAGTATTCCTTT...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000356971.3
CDS-3UTR CAA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAGCCAGTCAGTCTTTTTaGGTGTCCCCAGCACTTGGC +
Preference number: 5 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSASQSF*VSPALG
Trigger: GCCAAGTGCTGGGGACACCAAAAAAGACTGACTGGC...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAACCTCCTGGAGATGGCTaGGGTGATCTGTCCTGGAGA +
Preference number: 5 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKPPGDG*GDLSWR
Trigger: TCTCCAGGACAGATCACCCAAGCCATCTCCAGGAGG...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAAGCAACGGGCTTGGCTaGTCCTCCTGGAGATGGCTT +
Preference number: 5 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRSNGLG*SSWRWL
Trigger: AAGCCATCTCCAGGAGGACAAGCCAAGCCCGTTGCT...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAGGAAAAGCAACGGGCTaGGCTTGTCCTCCTGGAGAT +
Preference number: 5 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSGKATG*ACPPGD
Trigger: ATCTCCAGGAGGACAAGCCAAGCCCGTTGCTTTTCC...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATGGAAAAGCAACGGGCTaGGCTTGTCCTCCTGGAGAT +
Preference number: 5 (lower is better)
Translates to: VTFPLAFKATISEANVPYGKATG*ACPPGD
Trigger: ATCTCCAGGAGGACAAGCCAAGCCCGTTGCTTTTCC...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAGTTACTCAGGAGGCTaGAACCTGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSSYSGG*NLGGRG
Trigger: ACCTCTGCCTCCCAGGTTCAAGCCTCCTGAGTAACT...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATTGTAATCCCAGTACTTaGGGAGGTGGAGGAGGGTGG +
Preference number: 5 (lower is better)
Translates to: VTFPLAFKATISEANVPYCNPST*GGGGGW
Trigger: CCACCCTCCTCCACCTCCCAAAGTACTGGGATTACA...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAGCCAGTCAGTCTTTTTaGGTGTCCCCAGCACTTGGC +
Preference number: 5 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRASQSF*VSPALG
Trigger: GCCAAGTGCTGGGGACACCAAAAAAGACTGACTGGC...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGGCCAACGGAAGTTCATaGCACTTGAAAGTTGATAGC +
Preference number: 5 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLANGSS*HLKVDS
Trigger: GCTATCAACTTTCAAGTGCAATGAACTTCCGTTGGC...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGGCTTCACTGCTAGCATaGGGAATCAAGGTCTTTAAG +
Preference number: 5 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLASLLA*GIKVFK
Trigger: CTTAAAGACCTTGATTCCCAATGCTAGCAGTGAAGC...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAGGAAAAGCAACGGGCTaGGCTTGTCCTCCTGGAGAT +
Preference number: 5 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRGKATG*ACPPGD
Trigger: ATCTCCAGGAGGACAAGCCAAGCCCGTTGCTTTTCC...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGGGTGGAATAAATTCCTaGCCTGGATTCGAGAGTATG +
Preference number: 5 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLGGINS*PGFESM
Trigger: CATACTCTCGAATCCAGGCAAGGAATTTATTCCACC...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAATGTAATCCCAGTACTTaGGGAGGTGGAGGAGGGTGG +
Preference number: 5 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKCNPST*GGGGGW
Trigger: CCACCCTCCTCCACCTCCCAAAGTACTGGGATTACA...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATGCTTCCCCAGGGAAGTaGCTTGCTGGTAAACAAACG +
Preference number: 5 (lower is better)
Translates to: VTFPLAFKATISEANVPYASPGK*LAGKQT
Trigger: CGTTTGTTTACCAGCAAGCAACTTCCCTGGGGAAGC...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGGGGCTGGGTGAGGGCTaGGTAATTAATGGAATTTTT +
Preference number: 5 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLGLGEG*VINGIF
Trigger: AAAAATTCCATTAATTACCAAGCCCTCACCCAGCCC...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAACCGACTGTGGATGCTaGTTGTGGAGGGATGGGAAA +
Preference number: 5 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSTDCGC*LWRDGK
Trigger: TTTCCCATCCCTCCACAACAAGCATCCACAGTCGGT...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350082.10
CDS GCA 90 bp TGCCTTTCTGTGGTTTTTCTGAATCCTGAAGGTTTTGTGTGGTGCTaGCTAGTGGGTGTCCAACTTGGAAGTAAGGATATCGAAGTGCCT +
Preference number: 5 (lower is better)
Translates to: CLSVVFLNPEGFVWC*LVGVQLGSKDIEVP
Trigger: AGGCACTTCGATATCCTTACTTCCAAGTTGGACACCCACTAGGCAGCACCACACAAAACCTTCAGGATTCAGAAAAACCACAGAAAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS GCA 90 bp GGATGCCTTTCTGTGGTTTTTCTGAATCCTGAAGGTTTTGTGTGGTaGTGCCTAGTGGGTGTCCAACTTGGAAGTAAGGATATCGAAGTG +
Preference number: 5 (lower is better)
Translates to: GCLSVVFLNPEGFVW*CLVGVQLGSKDIEV
Trigger: CACTTCGATATCCTTACTTCCAAGTTGGACACCCACTAGGCAGCACCACACAAAACCTTCAGGATTCAGAAAAACCACAGAAAGGCATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CCA 90 bp CCAGGATGCCTTTCTGTGGTTTTTCTGAATCCTGAAGGTTTTGTGTaGTGCTGCCTAGTGGGTGTCCAACTTGGAAGTAAGGATATCGAA +
Preference number: 5 (lower is better)
Translates to: PGCLSVVFLNPEGFV*CCLVGVQLGSKDIE
Trigger: TTCGATATCCTTACTTCCAAGTTGGACACCCACTAGGCAGCACCACACAAAACCTTCAGGATTCAGAAAAACCACAGAAAGGCATCCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGGGAAGTTCATTGCACTaGAAAGTTGATAGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLGSSLH*KVDSLQ
Trigger: CTGAAGGCTATCAACTTTCAAGTGCAATGAACTTCC...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCATTCGACTGTGGATGCTaGTTGTGGAGGGATGGGAAA +
Preference number: 5 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSFDCGC*LWRDGK
Trigger: TTTCCCATCCCTCCACAACAAGCATCCACAGTCGAA...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGATGCCCTCTGCACATCTaGCAGGTAGAACACCAGTCA +
Preference number: 5 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRCPLHI*QVEHQS
Trigger: TGACTGGTGTTCTACCTGCAAGATGTGCAGAGGGCA...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAGCTTCCCCAGGGAAGTaGCTTGCTGGTAAACAAACG +
Preference number: 5 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRASPGK*LAGKQT
Trigger: CGTTTGTTTACCAGCAAGCAACTTCCCTGGGGAAGC...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAATTCGACTGTGGATGCTaGTTGTGGAGGGATGGGAAA +
Preference number: 5 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKFDCGC*LWRDGK
Trigger: TTTCCCATCCCTCCACAACAAGCATCCACAGTCGAA...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCATTTATCTCACCATTTTaGTGCTCCAGGCCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSFISPF*CSRPAV
Trigger: CACAGCTGGCCTGGAGCACAAAAATGGTGAGATAAA...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp ACTACCTGGGGCACATCAATACCCCTACAACGCACCTTCGTCACTGAATTTCTGGGCAGGAATGTAAGTTaGATTGACTGTGTTAACCTT +
Preference number: 5 (lower is better)
Translates to: TTWGTSIPLQRTFVTEFLGRNVS*IDCVNL
Trigger: AAGGTTAACACAGTCAATCAAACTTACATTCCTGCC...CAGAAATTCAGTGACGAAGGTGCGTTGTAGGGGTATTGATGTGCCCCAGGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATAGCTTTGCTGCCAGCTaGTTAACAGGAAAAGACCAC +
Preference number: 5 (lower is better)
Translates to: VTFPLAFKATISEANVPYSFAAS*LTGKDH
Trigger: GTGGTCTTTTCCTGTTAACAAGCTGGCAGCAAAGCT...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCACTGTATATGGAGGTTTaGATCGTATTTCTCGGGCCA +
Preference number: 5 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSLYMEV*IVFLGP
Trigger: TGGCCCGAGAAATACGATCAAAACCTCCATATACAG...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATGCCAACGGAAGTTCATaGCACTTGAAAGTTGATAGC +
Preference number: 5 (lower is better)
Translates to: VTFPLAFKATISEANVPYANGSS*HLKVDS
Trigger: GCTATCAACTTTCAAGTGCAATGAACTTCCGTTGGC...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATGCTTCACTGCTAGCATaGGGAATCAAGGTCTTTAAG +
Preference number: 5 (lower is better)
Translates to: VTFPLAFKATISEANVPYASLLA*GIKVFK
Trigger: CTTAAAGACCTTGATTCCCAATGCTAGCAGTGAAGC...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAATTTATCTCACCATTTTaGTGCTCCAGGCCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKFISPF*CSRPAV
Trigger: CACAGCTGGCCTGGAGCACAAAAATGGTGAGATAAA...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGATTTATCTCACCATTTTaGTGCTCCAGGCCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRFISPF*CSRPAV
Trigger: CACAGCTGGCCTGGAGCACAAAAATGGTGAGATAAA...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAACTGTTGAGATTGCATaGCGTTCACTGATGGTGACC +
Preference number: 5 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKTVEIA*RSLMVT
Trigger: GGTCACCATCAGTGAACGCAATGCAATCTCAACAGT...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CCA 90 bp CAAGCCAGAACTAGACCATGGATTAGGTGGAATAAATTCCTTGCCTaGATTCGAGAGTATGCCATTTCTTATACTGATCCCAGGCAAGTA +
Preference number: 5 (lower is better)
Translates to: QARTRPWIRWNKFLA*IREYAISYTDPRQV
Trigger: TACTTGCCTGGGATCAGTATAAGAAATGGCATACTCTCGAATCCAGGCAAGGAATTTATTCCACCTAATCCATGGTCTAGTTCTGGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGACTGTATATGGAGGTTTaGATCGTATTTCTCGGGCCA +
Preference number: 5 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRLYMEV*IVFLGP
Trigger: TGGCCCGAGAAATACGATCAAAACCTCCATATACAG...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCATGGTGTCCCCAGCACTaGGCAAATTTTGAATATTGT +
Preference number: 5 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSWCPQH*ANFEYC
Trigger: ACAATATTCAAAATTTGCCAAGTGCTGGGGACACCA...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAGGTCTTTAAGTTATaGGGTACACACTGTGGCCAA +
Preference number: 5 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSKVFKL*GTHCGQ
Trigger: TTGGCCACAGTGTGTACCCAATAACTTAAAGACCTT...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAGCTTCACTGCTAGCATaGGGAATCAAGGTCTTTAAG +
Preference number: 5 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRASLLA*GIKVFK
Trigger: CTTAAAGACCTTGATTCCCAATGCTAGCAGTGAAGC...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAGGTGGAATAAATTCCTaGCCTGGATTCGAGAGTATG +
Preference number: 5 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRGGINS*PGFESM
Trigger: CATACTCTCGAATCCAGGCAAGGAATTTATTCCACC...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCATCACATAGCCTTAAATaGCACCCCTGTTGCAATACT +
Preference number: 5 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSSHSLK*HPCCNT
Trigger: AGTATTGCAACAGGGGTGCAATTTAAGGCTATGTGA...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATTCACATAGCCTTAAATaGCACCCCTGTTGCAATACT +
Preference number: 5 (lower is better)
Translates to: VTFPLAFKATISEANVPYSHSLK*HPCCNT
Trigger: AGTATTGCAACAGGGGTGCAATTTAAGGCTATGTGA...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCATTTATGAATATGTGTTaGGCTTCCCCAGGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSFMNMC*ASPGKL
Trigger: CAACTTCCCTGGGGAAGCCAAACACATATTCATAAA...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAGGGCTGGGTGAGGGCTaGGTAATTAATGGAATTTTT +
Preference number: 5 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRGLGEG*VINGIF
Trigger: AAAAATTCCATTAATTACCAAGCCCTCACCCAGCCC...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGATGGTGTCCCCAGCACTaGGCAAATTTTGAATATTGT +
Preference number: 5 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRWCPQH*ANFEYC
Trigger: ACAATATTCAAAATTTGCCAAGTGCTGGGGACACCA...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAATGGTGTCCCCAGCACTaGGCAAATTTTGAATATTGT +
Preference number: 5 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKWCPQH*ANFEYC
Trigger: ACAATATTCAAAATTTGCCAAGTGCTGGGGACACCA...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAGGAAGTTCATTGCACTaGAAAGTTGATAGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKGSSLH*KVDSLQ
Trigger: CTGAAGGCTATCAACTTTCAAGTGCAATGAACTTCC...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAAAGGTCTTTAAGTTATaGGGTACACACTGTGGCCAA +
Preference number: 5 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKKVFKL*GTHCGQ
Trigger: TTGGCCACAGTGTGTACCCAATAACTTAAAGACCTT...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAACCTAGTGAGCCACACTaGAAATTTCACCACTTCATA +
Preference number: 5 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKPSEPH*KFHHFI
Trigger: TATGAAGTGGTGAAATTTCAAGTGTGGCTCACTAGG...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGATTGATACTTAGTTTTTaGGCCATGCATCTTGGCAGG +
Preference number: 5 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRLILSF*AMHLGR
Trigger: CCTGCCAAGATGCATGGCCAAAAAACTAAGTATCAA...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp TTCATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCACCAACTGAATTTACTTaGCTGATTACTGACATTGTC +
Preference number: 5 (lower is better)
Translates to: FMRKHGAHQLQQYLYLHSPTEFT*LITDIV
Trigger: GACAATGTCAGTAATCAGCAAAGTAAATTCAGTTGG...TGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAGGCAGGAATGTAAGTTaGATTGACTGTGTTAACCTT +
Preference number: 5 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKGRNVS*IDCVNL
Trigger: AAGGTTAACACAGTCAATCAAACTTACATTCCTGCC...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAGTCTCCAAACTGACTTaGTCATTTTTGAAACTGCTG +
Preference number: 5 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRVSKLT*SFLKLL
Trigger: CAGCAGTTTCAAAAATGACAAAGTCAGTTTGGAGAC...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp GTGACCTTCCCTCTTGCCTTTAAGGCAACCATAAGTGAGGCAAATGTACCATATTACCAAGTCATTAGGTaGAACCATATGAAAGTGTCT +
Preference number: 5 (lower is better)
Translates to: VTFPLAFKATISEANVPYYQVIR*NHMKVS
Trigger: AGACACTTTCATATGGTTCAACCTAATGACTTGGTA...ATATGGTACATTTGCCTCACTTATGGTTGCCTTAAAGGCAAGAGGGAAGGTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGAACTACATTGGCATGGTaGAGCTTCTTTAAAGACTTA +
Preference number: 5 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRTTLAW*SFFKDL
Trigger: TAAGTCTTTAAAGAAGCTCAACCATGCCAATGTAGT...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAAACTACATTGGCATGGTaGAGCTTCTTTAAAGACTTA +
Preference number: 5 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKTTLAW*SFFKDL
Trigger: TAAGTCTTTAAAGAAGCTCAACCATGCCAATGTAGT...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAACCAACTGAATTTACTTaGCTGATTACTGACATTGTC +
Preference number: 5 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKPTEFT*LITDIV
Trigger: GACAATGTCAGTAATCAGCAAAGTAAATTCAGTTGG...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp TTACTCTCCGATTTTAGGTTAGGGCCCTTTGGAAGCCATGGTTATTTGTTCAGACCAACTGAATTTACTTaGCTGATTACTGACATTGTC +
Preference number: 5 (lower is better)
Translates to: LLSDFRLGPFGSHGYLFRPTEFT*LITDIV
Trigger: GACAATGTCAGTAATCAGCAAAGTAAATTCAGTTGG...TCTGAACAAATAACCATGGCTTCCAAAGGGCCCTAACCTAAAATCGGAGAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS-3UTR CAA 90 bp ATGAGAAAGCATGGTGCCCATCAACTCCAACAGTACCTGTATTTGCACTCAAAATACCAAGTCATTAGGTaGAACCATATGAAAGTGTCT +
Preference number: 5 (lower is better)
Translates to: MRKHGAHQLQQYLYLHSKYQVIR*NHMKVS
Trigger: AGACACTTTCATATGGTTCAACCTAATGACTTGGTA...TTTTGAGTGCAAATACAGGTACTGTTGGAGTTGATGGGCACCATGCTTTCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CCA 72 bp CGAGCGGGGCGCAGCCGCCCGCTCCGGAGCTGGAAATaGGGACAATCCCTGCTAGGACCGGCCGAGGGCTCC +
Preference number: 6 (lower is better)
Translates to: RAGRSRPLRSWK*GQSLLGPAEGS
Trigger: GGAGCCCTCGGCCGGTCCTAGCAGGGATTGTCCCCATTTCCAGCTCCGGAGCGGGCGGCTGCGCCCCGCTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CCA 72 bp CCTCGACGAGCGGGGCGCAGCCGCCCGCTCCGGAGCTaGAAATGGGGACAATCCCTGCTAGGACCGGCCGAG +
Preference number: 6 (lower is better)
Translates to: PRRAGRSRPLRS*KWGQSLLGPAE
Trigger: CTCGGCCGGTCCTAGCAGGGATTGTCCCCATTTCCAGCTCCGGAGCGGGCGGCTGCGCCCCGCTCGTCGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CCA 72 bp GGGTGGGCGTGTCTCGCCGCTGATATGACGTCTGGGTaGGGGCACTGTTTCCTGTGCCCACAGGCTCAGAGG +
Preference number: 6 (lower is better)
Translates to: GWACLAADMTSG*GHCFLCPQAQR
Trigger: CCTCTGAGCCTGTGGGCACAGGAAACAGTGCCCCCACCCAGACGTCATATCAGCGGCGAGACACGCCCACCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CCA 72 bp TGTCCGGCCATGCACTGGCTGGGCGGCTGGAGGCCGTaGTATCAACCCAGGAGTGCTTCTAGGCTGGGTGTG +
Preference number: 6 (lower is better)
Translates to: CPAMHWLGGWRP*YQPRSASRLGV
Trigger: CACACCCAGCCTAGAAGCACTCCTGGGTTGATACCACGGCCTCCAGCCGCCCAGCCAGTGCATGGCCGGACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CCA 72 bp AGCCCAGTCTGTCCGGCCATGCACTGGCTGGGCGGCTaGAGGCCGTGGTATCAACCCAGGAGTGCTTCTAGG +
Preference number: 6 (lower is better)
Translates to: SPVCPAMHWLGG*RPWYQPRSASR
Trigger: CCTAGAAGCACTCCTGGGTTGATACCACGGCCTCCAGCCGCCCAGCCAGTGCATGGCCGGACAGACTGGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS GCA 72 bp CGAGATGCGTACTTGGAAGCCCAGTCTGTCCGGCCATaGACTGGCTGGGCGGCTGGAGGCCGTGGTATCAAC +
Preference number: 6 (lower is better)
Translates to: RDAYLEAQSVRP*TGWAAGGRGIN
Trigger: GTTGATACCACGGCCTCCAGCCGCCCAGCCAGTGCATGGCCGGACAGACTGGGCTTCCAAGTACGCATCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS TCA 72 bp TGCAGATCTCAGGGTGGGCGTGTCTCGCCGCTGATATaGCGTCTGGGTGGGGGCACTGTTTCCTGTGCCCAC +
Preference number: 6 (lower is better)
Translates to: CRSQGGRVSPLI*RLGGGTVSCAH
Trigger: GTGGGCACAGGAAACAGTGCCCCCACCCAGACGTCATATCAGCGGCGAGACACGCCCACCCTGAGATCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS TCA 72 bp TTGGCTGCAGATCTCAGGGTGGGCGTGTCTCGCCGCTaGTATGACGTCTGGGTGGGGGCACTGTTTCCTGTG +
Preference number: 6 (lower is better)
Translates to: LAADLRVGVSRR*YDVWVGALFPV
Trigger: CACAGGAAACAGTGCCCCCACCCAGACGTCATATCAGCGGCGAGACACGCCCACCCTGAGATCTGCAGCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS GCA 72 bp GGCTCCAGGGAAGAGTGGCCTGAGGGTGTAAACTTCTaGCATGATGCAGCCCACCGCCCAGACGTCAATGGG +
Preference number: 6 (lower is better)
Translates to: GSREEWPEGVNF*HDAAHRPDVNG
Trigger: CCCATTGACGTCTGGGCGGTGGGCTGCATCATGGCAGAAGTTTACACCCTCAGGCCACTCTTCCCTGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CCA 72 bp GCCTGCTCAGGCCGGACACTCATCTCACGGCCGAAGTaGTTCAGTTCTGCAGTGGTAGCAGTCCTCCCCAGA +
Preference number: 6 (lower is better)
Translates to: ACSGRTLISRPK*FSSAVVAVLPR
Trigger: TCTGGGGAGGACTGCTACCACTGCAGAACTGAACCACTTCGGCCGTGAGATGAGTGTCCGGCCTGAGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CCA 72 bp TCACCAAGGCAGACAGTCATCGCCGAGATGCGTACTTaGAAGCCCAGTCTGTCCGGCCATGCACTGGCTGGG +
Preference number: 6 (lower is better)
Translates to: SPRQTVIAEMRT*KPSLSGHALAG
Trigger: CCCAGCCAGTGCATGGCCGGACAGACTGGGCTTCCAAGTACGCATCTCGGCGATGACTGTCTGCCTTGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CAA 72 bp ATCACCAAGGCAGACAGTCATCGCCGAGATGCGTACTaGGAAGCCCAGTCTGTCCGGCCATGCACTGGCTGG +
Preference number: 6 (lower is better)
Translates to: ITKADSHRRDAY*EAQSVRPCTGW
Trigger: CCAGCCAGTGCATGGCCGGACAGACTGGGCTTCCAAGTACGCATCTCGGCGATGACTGTCTGCCTTGGTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CAA 90 bp AAGAGATTCATCACCAAGGCAGACAGTCATCGCCGAGATGCGTACTaGGAAGCCCAGTCTGTCCGGCCATGCACTGGCTGGGCGGCTGGA +
Preference number: 6 (lower is better)
Translates to: KRFITKADSHRRDAY*EAQSVRPCTGWAAG
Trigger: TCCAGCCGCCCAGCCAGTGCATGGCCGGACAGACTGGGCTTCCAAGTACGCATCTCGGCGATGACTGTCTGCCTTGGTGATGAATCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS TCA 72 bp GATCTGTCCTGGAGACCTCTGCTTTGTAGGGGTACGTaGGATGCAGAGGGGGCTGGCTGGCTTGATGCTGTC +
Preference number: 6 (lower is better)
Translates to: DLSWRPLLCRGT*DAEGAGWLDAV
Trigger: GACAGCATCAAGCCAGCCAGCCCCCTCTGCATCTCACGTACCCCTACAAAGCAGAGGTCTCCAGGACAGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS GCA 72 bp CTGGAGATGGCTTGGGTGATCTGTCCTGGAGACCTCTaGTTTGTAGGGGTACGTGAGATGCAGAGGGGGCTG +
Preference number: 6 (lower is better)
Translates to: LEMAWVICPGDL*FVGVREMQRGL
Trigger: CAGCCCCCTCTGCATCTCACGTACCCCTACAAAGCAGAGGTCTCCAGGACAGATCACCCAAGCCATCTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS GCA 72 bp GCTGATATGACGTCTGGGTGGGGGCACTGTTTCCTGTaGCCACAGGCTCAGAGGGCTTCAGGTCCAAAACAC +
Preference number: 6 (lower is better)
Translates to: ADMTSGWGHCFL*PQAQRASGPKH
Trigger: GTGTTTTGGACCTGAAGCCCTCTGAGCCTGTGGGCACAGGAAACAGTGCCCCCACCCAGACGTCATATCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CCA 72 bp GCTTCAAATAGTGCTGCTTGGCTGCAGATCTCAGGGTaGGCGTGTCTCGCCGCTGATATGACGTCTGGGTGG +
Preference number: 6 (lower is better)
Translates to: ASNSAAWLQISG*ACLAADMTSGW
Trigger: CCACCCAGACGTCATATCAGCGGCGAGACACGCCCACCCTGAGATCTGCAGCCAAGCAGCACTATTTGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CCA 72 bp GCTGCTCACCGACTGTGGATGCTTGTTGTGGAGGGATaGGAAAAGCAACGGGCTTGGCTTGTCCTCCTGGAG +
Preference number: 6 (lower is better)
Translates to: AAHRLWMLVVEG*EKQRAWLVLLE
Trigger: CTCCAGGAGGACAAGCCAAGCCCGTTGCTTTTCCCATCCCTCCACAACAAGCATCCACAGTCGGTGAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350082.10
CDS CAA 90 bp CCGACTGTGGATGCTTGTTGTGGAGGGATGGGAAAAGCAACGGGCTaGGCTTGTCCTCCTGGAGATGGCTTGGGTGATCTGTCCTGGAGA +
Preference number: 6 (lower is better)
Translates to: PTVDACCGGMGKATG*ACPPGDGLGDLSWR
Trigger: TCTCCAGGACAGATCACCCAAGCCATCTCCAGGAGGACAAGCCAAGCCCGTTGCTTTTCCCATCCCTCCACAACAAGCATCCACAGTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350082.10
CDS GCA 72 bp CCGGACACTCATCTCACGGCCGAAGTGGTTCAGTTCTaGAGTGGTAGCAGTCCTCCCCAGAGTGTAACCAGA +
Preference number: 6 (lower is better)
Translates to: PDTHLTAEVVQF*SGSSPPQSVTR
Trigger: TCTGGTTACACTCTGGGGAGGACTGCTACCACTGCAGAACTGAACCACTTCGGCCGTGAGATGAGTGTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS GCA 72 bp GAGATTCATCACCAAGGCAGACAGTCATCGCCGAGATaGGTACTTGGAAGCCCAGTCTGTCCGGCCATGCAC +
Preference number: 6 (lower is better)
Translates to: EIHHQGRQSSPR*VLGSPVCPAMH
Trigger: GTGCATGGCCGGACAGACTGGGCTTCCAAGTACGCATCTCGGCGATGACTGTCTGCCTTGGTGATGAATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CCA 72 bp CAGGCAAGTATCGAGAGTGCTTCAAATAGTGCTGCTTaGCTGCAGATCTCAGGGTGGGCGTGTCTCGCCGCT +
Preference number: 6 (lower is better)
Translates to: QASIESASNSAA*LQISGWACLAA
Trigger: AGCGGCGAGACACGCCCACCCTGAGATCTGCAGCCAAGCAGCACTATTTGAAGCACTCTCGATACTTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CAA 72 bp GGTGAATCTGGGCTGCTCACCGACTGTGGATGCTTGTaGTGGAGGGATGGGAAAAGCAACGGGCTTGGCTTG +
Preference number: 6 (lower is better)
Translates to: GESGLLTDCGCL*WRDGKSNGLGL
Trigger: CAAGCCAAGCCCGTTGCTTTTCCCATCCCTCCACAACAAGCATCCACAGTCGGTGAGCAGCCCAGATTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350082.10
CDS CAA 90 bp TCGACTGTGGATGCTTGTTGTGGAGGGATGGGAAAAGCAACGGGCTaGGCTTGTCCTCCTGGAGATGGCTTGGGTGATCTGTCCTGGAGA +
Preference number: 6 (lower is better)
Translates to: STVDACCGGMGKATG*ACPPGDGLGDLSWR
Trigger: TCTCCAGGACAGATCACCCAAGCCATCTCCAGGAGGACAAGCCAAGCCCGTTGCTTTTCCCATCCCTCCACAACAAGCATCCACAGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356971.3
ENST00000676107.1
CDS CAA 72 bp GATGCTTGTTGTGGAGGGATGGGAAAAGCAACGGGCTaGGCTTGTCCTCCTGGAGATGGCTTGGGTGATCTG +
Preference number: 6 (lower is better)
Translates to: DACCGGMGKATG*ACPPGDGLGDL
Trigger: CAGATCACCCAAGCCATCTCCAGGAGGACAAGCCAAGCCCGTTGCTTTTCCCATCCCTCCACAACAAGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CAA 72 bp TGCTCCAGGCCAGCTGTGATTTTCGACTGTGGATGCTaGTTGTGGAGGGATGGGAAAAGCAACGGGCTTGGC +
Preference number: 6 (lower is better)
Translates to: CSRPAVIFDCGC*LWRDGKSNGLG
Trigger: GCCAAGCCCGTTGCTTTTCCCATCCCTCCACAACAAGCATCCACAGTCGAAAATCACAGCTGGCCTGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356971.3
ENST00000676107.1
CDS CAA 72 bp TTTGGTGAATCTGGGCTGCTCACCGACTGTGGATGCTaGTTGTGGAGGGATGGGAAAAGCAACGGGCTTGGC +
Preference number: 6 (lower is better)
Translates to: FGESGLLTDCGC*LWRDGKSNGLG
Trigger: GCCAAGCCCGTTGCTTTTCCCATCCCTCCACAACAAGCATCCACAGTCGGTGAGCAGCCCAGATTCACCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350082.10
CDS CAA 90 bp GTGATTTTTGGTGAATCTGGGCTGCTCACCGACTGTGGATGCTTGTaGTGGAGGGATGGGAAAAGCAACGGGCTTGGCTTGTCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: VIFGESGLLTDCGCL*WRDGKSNGLGLSSW
Trigger: CCAGGAGGACAAGCCAAGCCCGTTGCTTTTCCCATCCCTCCACAACAAGCATCCACAGTCGGTGAGCAGCCCAGATTCACCAAAAATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350082.10
CDS CAA 90 bp GCTGTGATTTTTGGTGAATCTGGGCTGCTCACCGACTGTGGATGCTaGTTGTGGAGGGATGGGAAAAGCAACGGGCTTGGCTTGTCCTCC +
Preference number: 6 (lower is better)
Translates to: AVIFGESGLLTDCGC*LWRDGKSNGLGLSS
Trigger: GGAGGACAAGCCAAGCCCGTTGCTTTTCCCATCCCTCCACAACAAGCATCCACAGTCGGTGAGCAGCCCAGATTCACCAAAAATCACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350082.10
CDS TCA 72 bp GCAGGACGGAACCGTAGGTTCCATCCCCGAGCTGCCTaGTTGTTGTGTATCTATTCATGGTGTGCCTGCTCA +
Preference number: 6 (lower is better)
Translates to: AGRNRRFHPRAA*LLCIYSWCACS
Trigger: TGAGCAGGCACACCATGAATAGATACACAACAATCAGGCAGCTCGGGGATGGAACCTACGGTTCCGTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CCA 72 bp TGGCTGGGCAGGTGGGACTGGCTTAATATAAGGAGGTaGGCCTGCCTTTTCCAGGATGCCTTTCTGTGGTTT +
Preference number: 6 (lower is better)
Translates to: WLGRWDWLNIRR*ACLFQDAFLWF
Trigger: AAACCACAGAAAGGCATCCTGGAAAAGGCAGGCCCACCTCCTTATATTAAGCCAGTCCCACCTGCCCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CCA 72 bp ATGCTTGTTGTGGAGGGATGGGAAAAGCAACGGGCTTaGCTTGTCCTCCTGGAGATGGCTTGGGTGATCTGT +
Preference number: 6 (lower is better)
Translates to: MLVVEGWEKQRA*LVLLEMAWVIC
Trigger: ACAGATCACCCAAGCCATCTCCAGGAGGACAAGCCAAGCCCGTTGCTTTTCCCATCCCTCCACAACAAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CAA 72 bp TCCAGGCCAGCTGTGATTTTCGACTGTGGATGCTTGTaGTGGAGGGATGGGAAAAGCAACGGGCTTGGCTTG +
Preference number: 6 (lower is better)
Translates to: SRPAVIFDCGCL*WRDGKSNGLGL
Trigger: CAAGCCAAGCCCGTTGCTTTTCCCATCCCTCCACAACAAGCATCCACAGTCGAAAATCACAGCTGGCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356971.3
ENST00000676107.1
CDS CCA 72 bp TGTGATTTTCGACTGTGGATGCTTGTTGTGGAGGGATaGGAAAAGCAACGGGCTTGGCTTGTCCTCCTGGAG +
Preference number: 6 (lower is better)
Translates to: CDFRLWMLVVEG*EKQRAWLVLLE
Trigger: CTCCAGGAGGACAAGCCAAGCCCGTTGCTTTTCCCATCCCTCCACAACAAGCATCCACAGTCGAAAATCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356971.3
ENST00000676107.1
CDS GCA 72 bp ATTTTTGGTGAATCTGGGCTGCTCACCGACTGTGGATaGTTGTTGTGGAGGGATGGGAAAAGCAACGGGCTT +
Preference number: 6 (lower is better)
Translates to: IFGESGLLTDCG*LLWRDGKSNGL
Trigger: AAGCCCGTTGCTTTTCCCATCCCTCCACAACAAGCATCCACAGTCGGTGAGCAGCCCAGATTCACCAAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350082.10
CDS CCA 72 bp CAGCTCCAGCAAAAGCAGGTCTTATTTAGTTGTAAGTaGAAAGGAATACTCTTCTTGGCGCCGCGAACGCAG +
Preference number: 6 (lower is better)
Translates to: QLQQKQVLFSCK*KGILFLAPRTQ
Trigger: CTGCGTTCGCGGCGCCAAGAAGAGTATTCCTTTCCACTTACAACTAAATAAGACCTGCTTTTGCTGGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356971.3
CDS GCA 72 bp CTTCTCCTACTCTTTGGCTTTATCTCACCATTTTTGTaGTCCAGGCCAGCTGTGATTTTCGACTGTGGATGC +
Preference number: 6 (lower is better)
Translates to: LLLLFGFISPFL*SRPAVIFDCGC
Trigger: GCATCCACAGTCGAAAATCACAGCTGGCCTGGAGCACAAAAATGGTGAGATAAAGCCAAAGAGTAGGAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356971.3
ENST00000676107.1
CDS CAA 90 bp CCAGACAAGCCAGAACTAGACCATGGATTAGGTGGAATAAATTCCTaGCCTGGATTCGAGAGTATGCCATTTCTTATACTGATCCCAGGC +
Preference number: 6 (lower is better)
Translates to: PDKPELDHGLGGINS*PGFESMPFLILIPG
Trigger: GCCTGGGATCAGTATAAGAAATGGCATACTCTCGAATCCAGGCAAGGAATTTATTCCACCTAATCCATGGTCTAGTTCTGGCTTGTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS GCA 72 bp GTGGTTTTTCTGAATCCTGAAGGTTTTGTGTGGTGCTaGCTAGTGGGTGTCCAACTTGGAAGTAAGGATATC +
Preference number: 6 (lower is better)
Translates to: VVFLNPEGFVWC*LVGVQLGSKDI
Trigger: GATATCCTTACTTCCAAGTTGGACACCCACTAGGCAGCACCACACAAAACCTTCAGGATTCAGAAAAACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS GCA 72 bp TCTGTGGTTTTTCTGAATCCTGAAGGTTTTGTGTGGTaGTGCCTAGTGGGTGTCCAACTTGGAAGTAAGGAT +
Preference number: 6 (lower is better)
Translates to: SVVFLNPEGFVW*CLVGVQLGSKD
Trigger: ATCCTTACTTCCAAGTTGGACACCCACTAGGCAGCACCACACAAAACCTTCAGGATTCAGAAAAACCACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS GCA 72 bp CTTCTCCTACTCTTTGGCTTTATCTCACCATTTTTGTaGTCCAGGCCAGCTGTGATTTTTGGTGAATCTGGG +
Preference number: 6 (lower is better)
Translates to: LLLLFGFISPFL*SRPAVIFGESG
Trigger: CCCAGATTCACCAAAAATCACAGCTGGCCTGGAGCACAAAAATGGTGAGATAAAGCCAAAGAGTAGGAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350082.10
CDS CCA 72 bp CTTTCTGTGGTTTTTCTGAATCCTGAAGGTTTTGTGTaGTGCTGCCTAGTGGGTGTCCAACTTGGAAGTAAG +
Preference number: 6 (lower is better)
Translates to: LSVVFLNPEGFV*CCLVGVQLGSK
Trigger: CTTACTTCCAAGTTGGACACCCACTAGGCAGCACCACACAAAACCTTCAGGATTCAGAAAAACCACAGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CCA 72 bp TCTTTTCTTGTTTTTCAGGTCAATCCTGCTGAGGGATaGACTGAAATCCAAGTCATCCAAGTCAGCCCAATC +
Preference number: 6 (lower is better)
Translates to: SFLVFQVNPAEG*TEIQVIQVSPI
Trigger: GATTGGGCTGACTTGGATGACTTGGATTTCAGTCCATCCCTCAGCAGGATTGACCTGAAAAACAAGAAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS TCA 72 bp CGATGGCAGCACCAGCACAAGGTATTCAATAGGACGTaGCTGTCTCCCAAATACATATTTCCAAAAATCAGT +
Preference number: 6 (lower is better)
Translates to: RWQHQHKVFNRT*LSPKYIFPKIS
Trigger: ACTGATTTTTGGAAATATGTATTTGGGAGACAGTCACGTCCTATTGAATACCTTGTGCTGGTGCTGCCATCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CCA 72 bp ACTAGACCATGGATTAGGTGGAATAAATTCCTTGCCTaGATTCGAGAGTATGCCATTTCTTATACTGATCCC +
Preference number: 6 (lower is better)
Translates to: TRPWIRWNKFLA*IREYAISYTDP
Trigger: GGGATCAGTATAAGAAATGGCATACTCTCGAATCCAGGCAAGGAATTTATTCCACCTAATCCATGGTCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1
CDS CAA 72 bp CCAGAACTAGACCATGGATTAGGTGGAATAAATTCCTaGCCTGGATTCGAGAGTATGCCATTTCTTATACTG +
Preference number: 6 (lower is better)
Translates to: PELDHGLGGINS*PGFESMPFLIL
Trigger: CAGTATAAGAAATGGCATACTCTCGAATCCAGGCAAGGAATTTATTCCACCTAATCCATGGTCTAGTTCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350082.10
ENST00000356971.3
ENST00000676107.1