RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CIITA (Homo sapiens)

Ensembl gene IDs: ENSG00000179583

Ensembl transcript IDs: ENST00000324288.14, ENST00000381835.9, ENST00000537380.1, ENST00000570546.5, ENST00000571186.5, ENST00000571190.1, ENST00000571545.1, ENST00000572665.1, ENST00000573309.5, ENST00000573379.1, ENST00000575513.1, ENST00000576601.1, ENST00000618207.4, ENST00000618327.4, ENST00000636238.1, ENST00000637439.1, ENST00000644232.1, ENST00000646979.1

Found 1556 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCGGTACCCGCCCCCTGGCGGCCGGAGCCAATCAGCGCGGGCGTTaGGCCGGCCAATTAGCGCGTGCAGGGGGCGGCCTGCCAATGAGC +
Preference number: 1 (lower is better)
Translates to: SGTRPLAAGANQRGR*AGQLARAGGGLPMS
Trigger: GCTCATTGGCAGGCCGCCCCCTGCACGCGCTAATTGGCCGGCTCAACGCCCGCGCTGATTGGCTCCGGCCGCCAGGGGGCGGGTACCGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR CCA 90 bp GGGGCTCCTGGGTGGACCGCAGCTGCCACCAGGCATCCACCCAACTaGGCGCTAAAGGAGCCTGGAGCCGGGCCTGTGTCTGTCAGCAGA +
Preference number: 1 (lower is better)
Translates to: GAPGWTAAATRHPPN*ALKEPGAGPVSVSR
Trigger: TCTGCTGACAGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCTGGTGGCAGCTGCGGTCCACCCAGGAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
3UTR GCA 90 bp TTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCGGGTaGCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTG +
Preference number: 1 (lower is better)
Translates to: FRSRAGANPEPAGAG*QDAEAHGIQPGEEL
Trigger: CAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
3UTR GCA 90 bp AATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTaGCACCAGGCATCCACCCAACTGGGCGCTAAAGGAGCCTGGAGC +
Preference number: 1 (lower is better)
Translates to: NVLQRRPRGSWVDRS*HQASTQLGAKGAWS
Trigger: GCTCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCTGGTGGCAGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
3UTR GCA 90 bp GGCTCCTGGCCACGCTGTCCTGATGTTTCCCCCAGTGAGGTGGTCTaGTGGAGGCGTCCCAGGGCGGTAGTGAATACGCAGCAGCGGATC +
Preference number: 1 (lower is better)
Translates to: GSWPRCPDVSPSEVV*WRRPRAVVNTQQRI
Trigger: GATCCGCTGCTGCGTATTCACTACCGCCCTGGGACGCCTCCAGCAGACCACCTCACTGGGGGAAACATCAGGACAGCGTGGCCAGGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 90 bp CATGGGAATCTGGTCGGTTTTCTCCAGGCGCATCTGGCCGGAGGCTaGCTCCTGGTTGAACAGCGCAGGCAGTGGCAGGCAGGGCAGGGT +
Preference number: 1 (lower is better)
Translates to: HGNLVGFLQAHLAGG*LLVEQRRQWQAGQG
Trigger: ACCCTGCCCTGCCTGCCACTGCCTGCGCTGTTCAACCAGGAGCCAGCCTCCGGCCAGATGCGCCTGGAGAAAACCGACCAGATTCCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571186.5
3UTR GCA 90 bp AGGGCAGCTACAGCCAGACTAGCGCCTGGCTGGGACTGTCGGGGATaGGGTTTGTGGTCACAGGACTGGGAGAGGAGTGAGGTCCTCACC +
Preference number: 1 (lower is better)
Translates to: RAATARLAPGWDCRG*GLWSQDWERSEVLT
Trigger: GGTGAGGACCTCACTCCTCTCCCAGTCCTGTGACCACAAACCGCATCCCCGACAGTCCCAGCCAGGCGCTAGTCTGGCTGTAGCTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 90 bp GTGCTGCCCTTCCAGAGGGCTCAGGGAGTCTTGGGCGTGACCAGCTaGAGGCACGTGGTAGACCAGGCATCTTCACAAAGCCCGCTGCTG +
Preference number: 1 (lower is better)
Translates to: VLPFQRAQGVLGVTS*RHVVDQASSQSPLL
Trigger: CAGCAGCGGGCTTTGTGAAGATGCCTGGTCTACCACGTGCCTCCAGCTGGTCACGCCCAAGACTCCCTGAGCCCTCTGGAAGGGCAGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 90 bp CCAAGGGCGGTGATAATTGGTACCCAGCGAGTCCCCAGATGGTGCTaGTGCCCTCACAGCTGCCATCCCAGGCCCCAAGCTTGGAGTGGC +
Preference number: 1 (lower is better)
Translates to: PRAVIIGTQRVPRWC*CPHSCHPRPQAWSG
Trigger: GCCACTCCAAGCTTGGGGCCTGGGATGGCAGCTGTGAGGGCACCAGCACCATCTGGGGACTCGCTGGGTACCAATTATCACCGCCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 90 bp TTGTGGCTGACAAACAGCAGAAGATCCAGTGGGGTTGAGAGAGTCTaGCCCAGTCGGGCTGGCGTGAAAGTCCCAGGCTGGCCCCCTGCC +
Preference number: 1 (lower is better)
Translates to: LWLTNSRRSSGVERV*PSRAGVKVPGWPPA
Trigger: GGCAGGGGGCCAGCCTGGGACTTTCACGCCAGCCCGACTGGGGCAGACTCTCTCAACCCCACTGGATCTTCTGCTGTTTGTCAGCCACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 90 bp AGCCCAAGGGCGGTGATAATTGGTACCCAGCGAGTCCCCAGATGGTaGTGGTGCCCTCACAGCTGCCATCCCAGGCCCCAAGCTTGGAGT +
Preference number: 1 (lower is better)
Translates to: SPRAVIIGTQRVPRW*WCPHSCHPRPQAWS
Trigger: ACTCCAAGCTTGGGGCCTGGGATGGCAGCTGTGAGGGCACCAGCACCATCTGGGGACTCGCTGGGTACCAATTATCACCGCCCTTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 90 bp TCCTGGCCACGCTGTCCTGATGTTTCCCCCAGTGAGGTGGTCTGCTaGAGGCGTCCCAGGGCGGTAGTGAATACGCAGCAGCGGATCAGA +
Preference number: 1 (lower is better)
Translates to: SWPRCPDVSPSEVVC*RRPRAVVNTQQRIR
Trigger: TCTGATCCGCTGCTGCGTATTCACTACCGCCCTGGGACGCCTCCAGCAGACCACCTCACTGGGGGAAACATCAGGACAGCGTGGCCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 90 bp CTGGAGAAAGGCATGGGAATCTGGTCGGTTTTCTCCAGGCGCATCTaGCCGGAGGCTGGCTCCTGGTTGAACAGCGCAGGCAGTGGCAGG +
Preference number: 1 (lower is better)
Translates to: LEKGMGIWSVFSRRI*PEAGSWLNSAGSGR
Trigger: CCTGCCACTGCCTGCGCTGTTCAACCAGGAGCCAGCCTCCGGCCAGATGCGCCTGGAGAAAACCGACCAGATTCCCATGCCTTTCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571186.5
3UTR GCA 90 bp GAACCCAGACTGGTTTGCAGCCCCCATGTTCCCCCTTGTCCCAGGTaGCTTTGTGCAGTGTACAGACTGGCCAACCTCACCTGGCAGCCC +
Preference number: 1 (lower is better)
Translates to: EPRLVCSPHVPPCPR*LCAVYRLANLTWQP
Trigger: GGGCTGCCAGGTGAGGTTGGCCAGTCTGTACACTGCACAAAGGCACCTGGGACAAGGGGGAACATGGGGGCTGCAAACCAGTCTGGGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 90 bp GCTCCCAGTGGTTCCCTAAATTTGAGGGATGGAGGAAGACTTCCCTaGCCCACCCCAAGCCTCCCGAGCCTGGTGGATTGGTCCCTGTCC +
Preference number: 1 (lower is better)
Translates to: APSGSLNLRDGGRLP*PTPSLPSLVDWSLS
Trigger: GGACAGGGACCAATCCACCAGGCTCGGGAGGCTTGGGGTGGGGCAGGGAAGTCTTCCTCCATCCCTCAAATTTAGGGAACCACTGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 90 bp AGGCCTCAGCAAAGAAGGGCAGGTCGACCTGCAAGGAAGAGTGAGTaGAGGGAATGGGGCGGGGCACCCACAGCCTCTGCTAAGGTCTCA +
Preference number: 1 (lower is better)
Translates to: RPQQRRAGRPARKSE*REWGGAPTASAKVS
Trigger: TGAGACCTTAGCAGAGGCTGTGGGTGCCCCGCCCCATTCCCTCCACTCACTCTTCCTTGCAGGTCGACCTGCCCTTCTTTGCTGAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 90 bp AGATCTGCACACAAGAGGGCAGCTACAGCCAGACTAGCGCCTGGCTaGGACTGTCGGGGATGCGGTTTGTGGTCACAGGACTGGGAGAGG +
Preference number: 1 (lower is better)
Translates to: RSAHKRAATARLAPG*DCRGCGLWSQDWER
Trigger: CCTCTCCCAGTCCTGTGACCACAAACCGCATCCCCGACAGTCCCAGCCAGGCGCTAGTCTGGCTGTAGCTGCCCTCTTGTGTGCAGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 90 bp CTGGAGATCTGCACACAAGAGGGCAGCTACAGCCAGACTAGCGCCTaGCTGGGACTGTCGGGGATGCGGTTTGTGGTCACAGGACTGGGA +
Preference number: 1 (lower is better)
Translates to: LEICTQEGSYSQTSA*LGLSGMRFVVTGLG
Trigger: TCCCAGTCCTGTGACCACAAACCGCATCCCCGACAGTCCCAGCCAGGCGCTAGTCTGGCTGTAGCTGCCCTCTTGTGTGCAGATCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR TCA 90 bp CAATCTGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCTTCTaGGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGG +
Preference number: 1 (lower is better)
Translates to: QSGELAGWGLPISVF*VPGVPCQGVWSESR
Trigger: CCTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCAGATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR GCA 90 bp TTGCAAAGCATTTTTCCGGGCAAGGTGGAAGGTGTTGCCAAGCCCTaGCCACTACCCAGCGCTGGCTCAGCTGGCCCAGAGCTGCAAGTC +
Preference number: 1 (lower is better)
Translates to: LQSIFPGKVEGVAKP*PLPSAGSAGPELQV
Trigger: GACTTGCAGCTCTGGGCCAGCTGAGCCAGCGCTGGGTAGTGGGCAGGGCTTGGCAACACCTTCCACCTTGCCCGGAAAAATGCTTTGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 90 bp ACTGGTTTGCAGCCCCCATGTTCCCCCTTGTCCCAGGTGCCTTTGTaGAGTGTACAGACTGGCCAACCTCACCTGGCAGCCCTGTCCAAA +
Preference number: 1 (lower is better)
Translates to: TGLQPPCSPLSQVPL*SVQTGQPHLAALSK
Trigger: TTTGGACAGGGCTGCCAGGTGAGGTTGGCCAGTCTGTACACTGCACAAAGGCACCTGGGACAAGGGGGAACATGGGGGCTGCAAACCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 90 bp TTGAGGGTTTCCAAGGACTTCAGCTGGGGGAAGGTGGCTGAGAGCTaGGAGACACCCTCGTCCCCGATCTTGTTCTCACTCAGCGCATCC +
Preference number: 1 (lower is better)
Translates to: LRVSKDFSWGKVAES*ETPSSPILFSLSAS
Trigger: GGATGCGCTGAGTGAGAACAAGATCGGGGACGAGGGTGTCTCGCAGCTCTCAGCCACCTTCCCCCAGCTGAAGTCCTTGGAAACCCTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618207.4
3UTR CCA 90 bp GAAAGCGGAGCTTCCAAGTCCCTTTCGGACTCCCTGCAGCCAAGGTaGGACTCCGTCTCCGCTAAAAACCAGCTCACTCCCAGGACAGAG +
Preference number: 1 (lower is better)
Translates to: ESGASKSLSDSLQPR*DSVSAKNQLTPRTE
Trigger: CTCTGTCCTGGGAGTGAGCTGGTTTTTAGCGGAGACGGAGTCCCACCTTGGCTGCAGGGAGTCCGAAAGGGACTTGGAAGCTCCGCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 90 bp TGGAGGGAATGGGGCGGGGCACCCACAGCCTCTGCTAAGGTCTCATaGCACTTAGCAGGGTCCTCAGCGTCTGCTAAGAGCTCAGGAAAT +
Preference number: 1 (lower is better)
Translates to: WREWGGAPTASAKVS*HLAGSSASAKSSGN
Trigger: ATTTCCTGAGCTCTTAGCAGACGCTGAGGACCCTGCTAAGTGCCATGAGACCTTAGCAGAGGCTGTGGGTGCCCCGCCCCATTCCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 90 bp CAAAGAAGGGCAGGTCGACCTGCAAGGAAGAGTGAGTGGAGGGAATaGGGCGGGGCACCCACAGCCTCTGCTAAGGTCTCATGGCACTTA +
Preference number: 1 (lower is better)
Translates to: QRRAGRPARKSEWRE*GGAPTASAKVSWHL
Trigger: TAAGTGCCATGAGACCTTAGCAGAGGCTGTGGGTGCCCCGCCCCATTCCCTCCACTCACTCTTCCTTGCAGGTCGACCTGCCCTTCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR TCA 90 bp AAGATCATCAACCACGCAGCCGGGTCTGGATTCCTCAGACCCTCTTaGCACCCAGCTCTCACTTGCTGGGGAGAGGAGCAGAGCTTGGGA +
Preference number: 1 (lower is better)
Translates to: KIINHAAGSGFLRPS*HPALTCWGEEQSLG
Trigger: TCCCAAGCTCTGCTCCTCTCCCCAGCAAGTGAGAGCTGGGTGTCAAGAGGGTCTGAGGAATCCAGACCCGGCTGCGTGGTTGATGATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR TCA 90 bp GGACAGATTGAGGGTTTCCAAGGACTTCAGCTGGGGGAAGGTGGCTaGGAGCTGCGAGACACCCTCGTCCCCGATCTTGTTCTCACTCAG +
Preference number: 1 (lower is better)
Translates to: GQIEGFQGLQLGEGG*ELRDTLVPDLVLTQ
Trigger: CTGAGTGAGAACAAGATCGGGGACGAGGGTGTCTCGCAGCTCTCAGCCACCTTCCCCCAGCTGAAGTCCTTGGAAACCCTCAATCTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618207.4
3UTR GCA 90 bp GCAGCACCTGATACCCTTTGCAGCCAGTTCGAGGCAGGAGGTGCTTaGCTGTCTGCAAAGATCATCAACCACGCAGCCGGGTCTGGATTC +
Preference number: 1 (lower is better)
Translates to: AAPDTLCSQFEAGGA*LSAKIINHAAGSGF
Trigger: GAATCCAGACCCGGCTGCGTGGTTGATGATCTTTGCAGACAGGCAAGCACCTCCTGCCTCGAACTGGCTGCAAAGGGTATCAGGTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 90 bp GAGCAGGCTGGTGGAGGGCAGCTATGGAGAGACATTAGCTCTGCCTaGACTTACAGCCTGAGGACCAAGCAGGCTCTGGAGGCAGAGAAA +
Preference number: 1 (lower is better)
Translates to: EQAGGGQLWRDISSA*TYSLRTKQALEAEK
Trigger: TTTCTCTGCCTCCAGAGCCTGCTTGGTCCTCAGGCTGTAAGTGCAGGCAGAGCTAATGTCTCTCCATAGCTGCCCTCCACCAGCCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 90 bp AGGTGCTTGCCTGTCTGCAAAGATCATCAACCACGCAGCCGGGTCTaGATTCCTCAGACCCTCTTGACACCCAGCTCTCACTTGCTGGGG +
Preference number: 1 (lower is better)
Translates to: RCLPVCKDHQPRSRV*IPQTLLTPSSHLLG
Trigger: CCCCAGCAAGTGAGAGCTGGGTGTCAAGAGGGTCTGAGGAATCCAGACCCGGCTGCGTGGTTGATGATCTTTGCAGACAGGCAAGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 90 bp GACTCATCTCAGATACCCATCTATGAGGTGGCAGCATTGGGCTCCTaGCCACGCTGTCCTGATGTTTCCCCCAGTGAGGTGGTCTGCTGG +
Preference number: 1 (lower is better)
Translates to: DSSQIPIYEVAALGS*PRCPDVSPSEVVCW
Trigger: CCAGCAGACCACCTCACTGGGGGAAACATCAGGACAGCGTGGCCAGGAGCCCAATGCTGCCACCTCATAGATGGGTATCTGAGATGAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR TCA 90 bp ATTGCACTATCATGCCCTGATTCCTCCGAGCAGCGCTTTACCACCTaGCAAATGGGGTTCAGGGGCACTTCCGGCACACTGTGCCTGTCC +
Preference number: 1 (lower is better)
Translates to: IALSCPDSSEQRFTT*QMGFRGTSGTLCLS
Trigger: GGACAGGCACAGTGTGCCGGAAGTGCCCCTGAACCCCATTTGTCAGGTGGTAAAGCGCTGCTCGGAGGAATCAGGGCATGATAGTGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR TCA 90 bp ACTCCACAAGCCAGGGACAGCATTTGGGGTGTGGTGGGAAAAGCCTaGAGGCCAAGCTGGAAACCAGGCCTGAATCCCATAGAAGTGGGG +
Preference number: 1 (lower is better)
Translates to: TPQARDSIWGVVGKA*RPSWKPGLNPIEVG
Trigger: CCCCACTTCTATGGGATTCAGGCCTGGTTTCCAGCTTGGCCTTCAGGCTTTTCCCACCACACCCCAAATGCTGTCCCTGGCTTGTGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR TCA 90 bp ACCTGGGAACAGGTGGGGCTAAGGAGGGAAGGAACCACCCTGTACTaGTGTCTCGTGTGTGCTGGGTATTGTCAGGCACTCCATGGACAC +
Preference number: 1 (lower is better)
Translates to: TWEQVGLRREGTTLY*CLVCAGYCQALHGH
Trigger: GTGTCCATGGAGTGCCTGACAATACCCAGCACACACGAGACATCAGTACAGGGTGGTTCCTTCCCTCCTTAGCCCCACCTGTTCCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 90 bp GATCATCTCAGGCTGATCCGTGAATCCTGTTGTTGCAGGTGTTCCTaGACACTGAATGGGATGGTGGGCGTCCACATCGCCAGCGTCTCC +
Preference number: 1 (lower is better)
Translates to: DHLRLIRESCCCRCS*TLNGMVGVHIASVS
Trigger: GGAGACGCTGGCGATGTGGACGCCCACCATCCCATTCAGTGTCCAGGAACACCTGCAACAACAGGATTCACGGATCAGCCTGAGATGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618207.4
3UTR TCA 90 bp ACACATAGAAACCTGGGGTCACCTCCCTGTCCTCGACTCACTGTGTaGCTTCAGGCAGAGGTCACCACCCTCTCTGGGCCCTTTCATTCT +
Preference number: 1 (lower is better)
Translates to: THRNLGSPPCPRLTV*LQAEVTTLSGPFHS
Trigger: AGAATGAAAGGGCCCAGAGAGGGTGGTGACCTCTGCCTGAAGTCACACAGTGAGTCGAGGACAGGGAGGTGACCCCAGGTTTCTATGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 90 bp GAGCACAGCTGGGATCATCTCAGGCTGATCCGTGAATCCTGTTGTTaGAGGTGTTCCTGGACACTGAATGGGATGGTGGGCGTCCACATC +
Preference number: 1 (lower is better)
Translates to: EHSWDHLRLIRESCC*RCSWTLNGMVGVHI
Trigger: GATGTGGACGCCCACCATCCCATTCAGTGTCCAGGAACACCTGCAACAACAGGATTCACGGATCAGCCTGAGATGATCCCAGCTGTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618207.4
3UTR CCA 90 bp TTGAACTGTGTCCCAGAACATCCTCCCGCCCTACACATAGAAACCTaGGGTCACCTCCCTGTCCTCGACTCACTGTGTGACTTCAGGCAG +
Preference number: 1 (lower is better)
Translates to: LNCVPEHPPALHIET*GHLPVLDSLCDFRQ
Trigger: CTGCCTGAAGTCACACAGTGAGTCGAGGACAGGGAGGTGACCCCAGGTTTCTATGTGTAGGGCGGGAGGATGTTCTGGGACACAGTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR TCA 90 bp AGTGCAGGGATCCCTTGCAGGGTGACACCTGAGCTATTTACAAGCTaGACCTGGATGGCAGCACCTGATACCCTTTGCAGCCAGTTCGAG +
Preference number: 1 (lower is better)
Translates to: SAGIPCRVTPELFTS*TWMAAPDTLCSQFE
Trigger: CTCGAACTGGCTGCAAAGGGTATCAGGTGCTGCCATCCAGGTTCAGCTTGTAAATAGCTCAGGTGTCACCCTGCAAGGGATCCCTGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR TCA 90 bp TTACCTCCCCCTATTCGATACGCAGAGCGAATTCGATTTGAGATCTaGGGGCAGACCCGAACCAGGAAAGCAACTCAGACGCTAGGGCCC +
Preference number: 1 (lower is better)
Translates to: LPPPIRYAERIRFEI*GQTRTRKATQTLGP
Trigger: GGGCCCTAGCGTCTGAGTTGCTTTCCTGGTTCGGGTCTGCCCTCAGATCTCAAATCGAATTCGCTCTGCGTATCGAATAGGGGGAGGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR GCA 90 bp AACTATTCCGTAGTGGCACTGAGGCCCCCAGCCAACAGCCAGCATTaGCTGTCAGACGTACAGAAGAATGAGTCTTCAGGTGACACCAGC +
Preference number: 1 (lower is better)
Translates to: NYSVVALRPPANSQH*LSDVQKNESSGDTS
Trigger: GCTGGTGTCACCTGAAGACTCATTCTTCTGTACGTCTGACAGGCAATGCTGGCTGTTGGCTGGGGGCCTCAGTGCCACTACGGAATAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 90 bp GTGTGTGCACGCGTGTGTGTGTATGTGTGTGTACGTGCACACACGTaGATGTGCACATGTGGTGAAAGGAGGGTGGGTAGGACAGTAGCA +
Preference number: 1 (lower is better)
Translates to: VCARVCVYVCVRAHT*MCTCGERRVGRTVA
Trigger: TGCTACTGTCCTACCCACCCTCCTTTCACCACATGTGCACATGCACGTGTGTGCACGTACACACACATACACACACACGCGTGCACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 90 bp GGAGTGTTAGTAAATTCCACGTGTAGCCCATTCAGACTGGAGATCTaGACACAAGAGGGCAGCTACAGCCAGACTAGCGCCTGGCTGGGA +
Preference number: 1 (lower is better)
Translates to: GVLVNSTCSPFRLEI*TQEGSYSQTSAWLG
Trigger: TCCCAGCCAGGCGCTAGTCTGGCTGTAGCTGCCCTCTTGTGTGCAGATCTCCAGTCTGAATGGGCTACACGTGGAATTTACTAACACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 90 bp CGTGGTAGACCAGGCATCTTCACAAAGCCCGCTGCTGATCAGCTTTaGCAGCCAACGTGCAAATCCGAAGCCAGGTTTGAGAAAGTGGTC +
Preference number: 1 (lower is better)
Translates to: RGRPGIFTKPAADQL*QPTCKSEARFEKVV
Trigger: GACCACTTTCTCAAACCTGGCTTCGGATTTGCACGTTGGCTGCCAAAGCTGATCAGCAGCGGGCTTTGTGAAGATGCCTGGTCTACCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 90 bp CTTGTCTGCTGTGCTCTGATGATGTCAGAAGGTTGGAGAACCTGCTaGCCTGGGTTCTATAAGCTCCAGCTCTGGGGTGCTTTTCAGCCT +
Preference number: 1 (lower is better)
Translates to: LVCCALMMSEGWRTC*PGFYKLQLWGAFQP
Trigger: AGGCTGAAAAGCACCCCAGAGCTGGAGCTTATAGAACCCAGGGCAGCAGGTTCTCCAACCTTCTGACATCATCAGAGCACAGCAGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 90 bp GGCATGCAGCAAGGTGCAGCGGTAGCCCGGGTTTCCTTCGGCTTTTaGGGCCTTAGCATTATGTCTAGGTTTGAACTGTGTTCAGTCTCT +
Preference number: 1 (lower is better)
Translates to: GMQQGAAVARVSFGF*GLSIMSRFELCSVS
Trigger: AGAGACTGAACACAGTTCAAACCTAGACATAATGCTAAGGCCGCAAAAGCCGAAGGAAACCCGGGCTACCGCTGCACCTTGCTGCATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR CCA 90 bp GAAGGTTGGAGAACCTGCTGCCCTGGGTTCTATAAGCTCCAGCTCTaGGGTGCTTTTCAGCCTGGGGCTCTTGATGCCTTAGAAGAAACT +
Preference number: 1 (lower is better)
Translates to: EGWRTCCPGFYKLQL*GAFQPGALDALEET
Trigger: AGTTTCTTCTAAGGCATCAAGAGCCCCAGGCTGAAAAGCACCCCAGAGCTGGAGCTTATAGAACCCAGGGCAGCAGGTTCTCCAACCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR TCA 90 bp CAGGAGGGAGACATTTGTATGCAGAGAGAGGCCTGCGAGGAAGAGTaGCCATTTGGAAGGTGCGTGGACTTACAATCCACTGGACATGGA +
Preference number: 1 (lower is better)
Translates to: QEGDICMQREACEEE*PFGRCVDLQSTGHG
Trigger: TCCATGTCCAGTGGATTGTAAGTCCACGCACCTTCCAAATGGTCACTCTTCCTCGCAGGCCTCTCTCTGCATACAAATGTCTCCCTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 90 bp GTGGCCTTGCACGGCTTGCTTAACCTCTCTGAGCTCCATGTGAAATaGAGGGATGATGGTCCTACTTGGCCCTACCTCCTAGAGTTGTTT +
Preference number: 1 (lower is better)
Translates to: VALHGLLNLSELHVK*RDDGPTWPYLLELF
Trigger: AAACAACTCTAGGAGGTAGGGCCAAGTAGGACCATCATCCCTGCATTTCACATGGAGCTCAGAGAGGTTAAGCAAGCCGTGCAAGGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 90 bp TGCAGAGAGAGGCCTGCGAGGAAGAGTGACCATTTGGAAGGTGCGTaGACTTACAATCCACTGGACATGGAATTGCACTATCATGCCCTG +
Preference number: 1 (lower is better)
Translates to: CRERPARKSDHLEGA*TYNPLDMELHYHAL
Trigger: CAGGGCATGATAGTGCAATTCCATGTCCAGTGGATTGTAAGTCCACGCACCTTCCAAATGGTCACTCTTCCTCGCAGGCCTCTCTCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR TCA 90 bp CGTGGACTTACAATCCACTGGACATGGAATTGCACTATCATGCCCTaGTTCCTCCGAGCAGCGCTTTACCACCTGACAAATGGGGTTCAG +
Preference number: 1 (lower is better)
Translates to: RGLTIHWTWNCTIMP*FLRAALYHLTNGVQ
Trigger: CTGAACCCCATTTGTCAGGTGGTAAAGCGCTGCTCGGAGGAATCAGGGCATGATAGTGCAATTCCATGTCCAGTGGATTGTAAGTCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR TCA 90 bp GTCTCTTTTACCTCCCCCTATTCGATACGCAGAGCGAATTCGATTTaGGATCTGAGGGCAGACCCGAACCAGGAAAGCAACTCAGACGCT +
Preference number: 1 (lower is better)
Translates to: VSFTSPYSIRRANSI*DLRADPNQESNSDA
Trigger: AGCGTCTGAGTTGCTTTCCTGGTTCGGGTCTGCCCTCAGATCTCAAATCGAATTCGCTCTGCGTATCGAATAGGGGGAGGTAAAAGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR TCA 90 bp ACCAGAGTTTGGAGAAGCGAAGGGGACACTGGTGGATCTCCACCATaGAAATTGGCGCTTTGGGAATGTCCAAAATTTCCAGGGCAACCG +
Preference number: 1 (lower is better)
Translates to: TRVWRSEGDTGGSPP*KLALWECPKFPGQP
Trigger: CGGTTGCCCTGGAAATTTTGGACATTCCCAAAGCGCCAATTTTCATGGTGGAGATCCACCAGTGTCCCCTTCGCTTCTCCAAACTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR GCA 90 bp TTAGCAGGGTCCTCAGCGTCTGCTAAGAGCTCAGGAAATGGTACCTaGTCTCATTCAGACCGTTTCCATCGTTATTACCAAGCCAGTGCC +
Preference number: 1 (lower is better)
Translates to: LAGSSASAKSSGNGT*SHSDRFHRYYQASA
Trigger: GGCACTGGCTTGGTAATAACGATGGAAACGGTCTGAATGAGAGCAGGTACCATTTCCTGAGCTCTTAGCAGACGCTGAGGACCCTGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 90 bp AACCACAATCAGCACAGACAGGCTAAATGCAGATCTCACAGCATTTaGCCTGAGGAGCAGGACAGCGGGCAGCTGAACTCTAGGAAAGAA +
Preference number: 1 (lower is better)
Translates to: NHNQHRQAKCRSHSI*PEEQDSGQLNSRKE
Trigger: TTCTTTCCTAGAGTTCAGCTGCCCGCTGTCCTGCTCCTCAGGGCAAATGCTGTGAGATCTGCATTTAGCCTGTCTGTGCTGATTGTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 90 bp GGCATCTTCACAAAGCCCGCTGCTGATCAGCTTTGGCAGCCAACGTaGAAATCCGAAGCCAGGTTTGAGAAAGTGGTCATCATTTCTCTG +
Preference number: 1 (lower is better)
Translates to: GIFTKPAADQLWQPT*KSEARFEKVVIISL
Trigger: CAGAGAAATGATGACCACTTTCTCAAACCTGGCTTCGGATTTGCACGTTGGCTGCCAAAGCTGATCAGCAGCGGGCTTTGTGAAGATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 90 bp GGCATTCTTGGCAGGAATATTGCAGAAGTGAGTGTGTGTCTTCAGTaGATCTTATCGAGAGGCACATGCCATCTGTCCCCTTTCTGGCGA +
Preference number: 1 (lower is better)
Translates to: GILGRNIAEVSVCLQ*ILSRGTCHLSPFWR
Trigger: TCGCCAGAAAGGGGACAGATGGCATGTGCCTCTCGATAAGATGCACTGAAGACACACACTCACTTCTGCAATATTCCTGCCAAGAATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000646979.1
3UTR CCA 90 bp GTCACCACCCTCTCTGGGCCCTTTCATTCTCTGCTATGGACTGAGTaGGACCAGCTTGGATCAAAATCCTCAAACCTCATACAACACTGT +
Preference number: 1 (lower is better)
Translates to: VTTLSGPFHSLLWTE*DQLGSKSSNLIQHC
Trigger: ACAGTGTTGTATGAGGTTTGAGGATTTTGATCCAAGCTGGTCCCACTCAGTCCATAGCAGAGAATGAAAGGGCCCAGAGAGGGTGGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR TCA 90 bp TATCCAGCTGATTCCATGTTCTCTAACACCCTATCCACACAAATCTaGGATGGGCTCAAGGATGACCACAGGCCTTGGAGATCTCTGCAG +
Preference number: 1 (lower is better)
Translates to: YPADSMFSNTLSTQI*DGLKDDHRPWRSLQ
Trigger: CTGCAGAGATCTCCAAGGCCTGTGGTCATCCTTGAGCCCATCTCAGATTTGTGTGGATAGGGTGTTAGAGAACATGGAATCAGCTGGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR TCA 90 bp CAAGACACAGGAGCGAAGGGGTTGATCTCTAATAGCCAAAGTGTGTaGCAAATGAGAATTGAACTGTGTCCCAGAACATCCTCCCGCCCT +
Preference number: 1 (lower is better)
Translates to: QDTGAKGLISNSQSV*QMRIELCPRTSSRP
Trigger: AGGGCGGGAGGATGTTCTGGGACACAGTTCAATTCTCATTTGTCACACACTTTGGCTATTAGAGATCAACCCCTTCGCTCCTGTGTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 90 bp AACTACCTCGGAATCTCTTTATTCAGGTGTTCCTTAACTCTAGGATaGAGGTTCCGTAGTGGGCGGACCTTCCAGCAACCAGAGTTTGGA +
Preference number: 1 (lower is better)
Translates to: NYLGISLFRCSLTLG*RFRSGRTFQQPEFG
Trigger: TCCAAACTCTGGTTGCTGGAAGGTCCGCCCACTACGGAACCTGCATCCTAGAGTTAAGGAACACCTGAATAAAGAGATTCCGAGGTAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR CCA 90 bp AGACATTTGTATGCAGAGAGAGGCCTGCGAGGAAGAGTGACCATTTaGAAGGTGCGTGGACTTACAATCCACTGGACATGGAATTGCACT +
Preference number: 1 (lower is better)
Translates to: RHLYAERGLRGRVTI*KVRGLTIHWTWNCT
Trigger: AGTGCAATTCCATGTCCAGTGGATTGTAAGTCCACGCACCTTCCAAATGGTCACTCTTCCTCGCAGGCCTCTCTCTGCATACAAATGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 90 bp GTTCATTTTATGTTATTGAGCACCTATTATACACAGGCGCCTTGCTaGGTACAGAGGGCACAGCAGTGTACAAAGCGAGATGTTTCCCGC +
Preference number: 1 (lower is better)
Translates to: VHFMLLSTYYTQAPC*VQRAQQCTKRDVSR
Trigger: GCGGGAAACATCTCGCTTTGTACACTGCTGTGCCCTCTGTACCCAGCAAGGCGCCTGTGTATAATAGGTGCTCAATAACATAAAATGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR TCA 90 bp TTTGCAGAGCACTTGATTTCAAAGCACCTTCACATACACACCAAGTaGAGCAGGGTTCAAACGATTGACCCCTTTCTACAGGCGAGGAGA +
Preference number: 1 (lower is better)
Translates to: FAEHLISKHLHIHTK*SRVQTIDPFLQARR
Trigger: TCTCCTCGCCTGTAGAAAGGGGTCAATCGTTTGAACCCTGCTTCACTTGGTGTGTATGTGAAGGTGCTTTGAAATCAAGTGCTCTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 90 bp TCCAGCCTGGGCAACAGAGCAAGAGAGGGATTAAATGAGTGGAATTaGGAGCTTGTAGTTTCACGGAATACAAGCAGTAATTCTCTCCAG +
Preference number: 1 (lower is better)
Translates to: SSLGNRAREGLNEWN*ELVVSRNTSSNSLQ
Trigger: CTGGAGAGAATTACTGCTTGTATTCCGTGAAACTACAAGCTCCCAATTCCACTCATTTAATCCCTCTCTTGCTCTGTTGCCCAGGCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 90 bp TTTTTAACTTTGAGATTCGGGAAAGGAGTTCTAGGCAGAACCTTGTaGCTGACAAACAGCAGAAGATCCAGTGGGGTTGAGAGAGTCTGC +
Preference number: 1 (lower is better)
Translates to: FLTLRFGKGVLGRTL*LTNSRRSSGVERVC
Trigger: GCAGACTCTCTCAACCCCACTGGATCTTCTGCTGTTTGTCAGCCACAAGGTTCTGCCTAGAACTCCTTTCCCGAATCTCAAAGTTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR TCA 90 bp AGATTAGATTCAGATGAGGCATTCTTGGCAGGAATATTGCAGAAGTaGGTGTGTGTCTTCAGTGCATCTTATCGAGAGGCACATGCCATC +
Preference number: 1 (lower is better)
Translates to: RLDSDEAFLAGILQK*VCVFSASYREAHAI
Trigger: GATGGCATGTGCCTCTCGATAAGATGCACTGAAGACACACACTCACTTCTGCAATATTCCTGCCAAGAATGCCTCATCTGAATCTAATCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000646979.1
3UTR GCA 90 bp TTTGTTCATTTTATGTTATTGAGCACCTATTATACACAGGCGCCTTaGTGGGTACAGAGGGCACAGCAGTGTACAAAGCGAGATGTTTCC +
Preference number: 1 (lower is better)
Translates to: FVHFMLLSTYYTQAP*WVQRAQQCTKRDVS
Trigger: GGAAACATCTCGCTTTGTACACTGCTGTGCCCTCTGTACCCAGCAAGGCGCCTGTGTATAATAGGTGCTCAATAACATAAAATGAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 90 bp CCCTGTCAAACAACAATACATGTCACATGTTTAACATACAAGTTCTaGGAGATGTTCAGTGAAGTTTGCGGAAAGGATAGTGAGCTGGGA +
Preference number: 1 (lower is better)
Translates to: PCQTTIHVTCLTYKF*EMFSEVCGKDSELG
Trigger: TCCCAGCTCACTATCCTTTCCGCAAACTTCACTGAACATCTCGCAGAACTTGTATGTTAAACATGTGACATGTATTGTTGTTTGACAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR TCA 90 bp TCAATTTGGGTTTGTCTGATGGTTATACTCGAGATTAGATTCAGATaGGGCATTCTTGGCAGGAATATTGCAGAAGTGAGTGTGTGTCTT +
Preference number: 1 (lower is better)
Translates to: SIWVCLMVILEIRFR*GILGRNIAEVSVCL
Trigger: AAGACACACACTCACTTCTGCAATATTCCTGCCAAGAATGCCTCATCTGAATCTAATCTCGAGTATAACCATCAGACAAACCCAAATTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000646979.1
3UTR GCA 90 bp AATCCTCAAACCTCATACAACACTGTCAGCAGCTTTTCCTGTATCTaGCTGTTACCTGAACTATTAACAGTTTTCTTTAAATTGGCTCCT +
Preference number: 1 (lower is better)
Translates to: NPQTSYNTVSSFSCI*LLPELLTVFFKLAP
Trigger: AGGAGCCAATTTAAAGAAAACTGTTAATAGTTCAGGTAACAGGCAGATACAGGAAAAGCTGCTGACAGTGTTGTATGAGGTTTGAGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 90 bp GTCTTTCTCTCTTGTGACATTGACATATTAAGCAGAGTACAAGGCTaGTGTTTTGTAAACTGTCTCTCAATTTGGGTTTGTCTGATGGTT +
Preference number: 1 (lower is better)
Translates to: VFLSCDIDILSRVQG*CFVNCLSIWVCLMV
Trigger: AACCATCAGACAAACCCAAATTGAGAGACAGTTTACAAAACACCAGCCTTGTACTCTGCTTAATATGTCAATGTCACAAGAGAGAAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000646979.1
3UTR-3UTR CCA 90 bp CGGTACCCGCCCCCTGGCGGCCGGAGCCAATCAGCGCGGGCGTTGAGCCGGCCAAGGATGAGGGCGGGTTaGGGCGCTAGCAAGGGAGAG +
Preference number: 2 (lower is better)
Translates to: RYPPPGGRSQSARALSRPRMRAG*GASKGE
Trigger: CTCTCCCTTGCTAGCGCCCCAACCCGCCCTCATCCT...TGGCCGGCTCAACGCCCGCGCTGATTGGCTCCGGCCGCCAGGGGGCGGGTACCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR-3UTR CCA 90 bp CTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTAGGCCTCGGGGCTCCTaGGTGGACCGCAGCTGCCAC +
Preference number: 2 (lower is better)
Translates to: LSAMSFREGLGAPGWTAARPRGS*VDRSCH
Trigger: GTGGCAGCTGCGGTCCACCCAGGAGCCCCGAGGCCT...AGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR CCA 90 bp CGGTACCCGCCCCCTGGCGGCCGGAGCCAATCAGCGCGGGCGTTGAGCCGGCCATCCTCCAGGTCTAACTaGATGCCAGGAATGGCCAGA +
Preference number: 2 (lower is better)
Translates to: RYPPPGGRSQSARALSRPSSRSN*MPGMAR
Trigger: TCTGGCCATTCCTGGCATCCAGTTAGACCTGGAGGA...TGGCCGGCTCAACGCCCGCGCTGATTGGCTCCGGCCGCCAGGGGGCGGGTACCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR-3UTR CCA 90 bp GTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGGGTGGAGAAGTACAGGCCTCGGGGCTCCTaGGTGGACCGCAGCTGCCAC +
Preference number: 2 (lower is better)
Translates to: VPGVPCQGVWSESRVEKYRPRGS*VDRSCH
Trigger: GTGGCAGCTGCGGTCCACCCAGGAGCCCCGAGGCCT...GTACTTCTCCACCCTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR CCA 90 bp GCCGTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCTCTGTCACTCCCTCTaGCCTGGCCGTGGCTGTCCG +
Preference number: 2 (lower is better)
Translates to: AVAVRNVLQRRPRGSWVDLCHSL*PGRGCP
Trigger: CGGACAGCCACGGCCAGGCCAGAGGGAGTGACAGAG...GTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCACGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR CCA 90 bp CAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCAGGGTGGCAGGGGCCTaGGCAGGCAGAATGGGGCTG +
Preference number: 2 (lower is better)
Translates to: QGPGARMLRLMGYSLEKSRVAGA*AGRMGL
Trigger: CAGCCCCATTCTGCCTGCCCAGGCCCCTGCCACCCT...GCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR CCA 90 bp CTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTAGGGTGGCAGGGGCCTaGGCAGGCAGAATGGGGCTG +
Preference number: 2 (lower is better)
Translates to: LSAMSFREGLGAPGWTAARVAGA*AGRMGL
Trigger: CAGCCCCATTCTGCCTGCCCAGGCCCCTGCCACCCT...AGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR TCA 90 bp TGGGCATGGGAACACGAGGTGCTACAGAGACACTGGCACCCGGCTAGGCACACACCAGTCGGGCTGGCGTaGAAGTCCCAGGCTGGCCCC +
Preference number: 2 (lower is better)
Translates to: WAWEHEVLQRHWHPARHTPVGLA*KSQAGP
Trigger: GGGGCCAGCCTGGGACTTTCACGCCAGCCCGACTGG...TGTGTGCCTAGCCGGGTGCCAGTGTCTCTGTAGCACCTCGTGTTCCCATGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR CCA 90 bp TGGGCATGGGAACACGAGGTGCTACAGAGACACTGGCACCCGGCTAGGCACACACTCGGGGCTCCTGGGTaGACCGCAGCTGCCACCAGG +
Preference number: 2 (lower is better)
Translates to: WAWEHEVLQRHWHPARHTLGAPG*TAAATR
Trigger: CCTGGTGGCAGCTGCGGTCCACCCAGGAGCCCCGAG...TGTGTGCCTAGCCGGGTGCCAGTGTCTCTGTAGCACCTCGTGTTCCCATGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR CCA 90 bp GCCGTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACTCACTCCCTCTGGCCTaGCCGTGGCTGTCCGCAATG +
Preference number: 2 (lower is better)
Translates to: AVAVRNVLQRRPRGSWVDSLPLA*PWLSAM
Trigger: CATTGCGGACAGCCACGGCCAGGCCAGAGGGAGTGA...GTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCACGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR CCA 90 bp CTGGCCGGAGGCTGGCTCCTGGTTGAACAGCGCAGGCAGTGGCAGGCAGGGCAGGGCCCTGGAGTGGCATaGATGTCTCTCCTGACAGAG +
Preference number: 2 (lower is better)
Translates to: LAGGWLLVEQRRQWQAGQGPGVA*MSLLTE
Trigger: CTCTGTCAGGAGAGACATCCATGCCACTCCAGGGCC...CTGCCCTGCCTGCCACTGCCTGCGCTGTTCAACCAGGAGCCAGCCTCCGGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571186.5
3UTR-3UTR CCA 90 bp GCGCATCTGGCCGGAGGCTGGCTCCTGGTTGAACAGCGCAGGCAGTGGCAGGCAGGATGGGGAGGGCCCTaGAGTGGCATGGATGTCTCT +
Preference number: 2 (lower is better)
Translates to: AHLAGGWLLVEQRRQWQAGWGGP*SGMDVS
Trigger: AGAGACATCCATGCCACTCCAGGGCCCTCCCCATCC...TGCCTGCCACTGCCTGCGCTGTTCAACCAGGAGCCAGCCTCCGGCCAGATGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571186.5
3UTR-3UTR CCA 90 bp TGGGCCCCGGCAGCCGTGAACTTGTTGTACTGGACGTCCATCACCCGGAGGGACGGCGCTAAAGGAGCCTaGAGCCGGGCCTGTGTCTGT +
Preference number: 2 (lower is better)
Translates to: WAPAAVNLLYWTSITRRDGAKGA*SRACVC
Trigger: ACAGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCC...GTCCCTCCGGGTGATGGACGTCCAGTACAACAAGTTCACGGCTGCCGGGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618207.4
3UTR-3UTR CCA 90 bp TGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTCTCGGGGCTCCTGGGTaGACCGCAGCTGCCACCAGG +
Preference number: 2 (lower is better)
Translates to: WGISRLGVAHQCLLSARCLGAPG*TAAATR
Trigger: CCTGGTGGCAGCTGCGGTCCACCCAGGAGCCCCGAG...ACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR CCA 90 bp GACGTGGTCAGTGTCAATGGCGTGTCAGACCCTGAAGGGGCTCTAGCCCAGGAAAGGCCTCGGGGCTCCTaGGTGGACCGCAGCTGCCAC +
Preference number: 2 (lower is better)
Translates to: DVVSVNGVSDPEGALAQERPRGS*VDRSCH
Trigger: GTGGCAGCTGCGGTCCACCCAGGAGCCCCGAGGCCT...TTCCTGGGCTAGAGCCCCTTCAGGGTCTGACACGCCATTGACACTGACCACGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR CCA 90 bp CAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCCCTCTGGCCTGGCCGTaGCTGTCCGCAATGTCCTTC +
Preference number: 2 (lower is better)
Translates to: QGPGARMLRLMGYSLEKSPLAWP*LSAMSF
Trigger: GAAGGACATTGCGGACAGCCACGGCCAGGCCAGAGG...GCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR CCA 90 bp CTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTCCTCTGGCCTGGCCGTaGCTGTCCGCAATGTCCTTC +
Preference number: 2 (lower is better)
Translates to: LSAMSFREGLGAPGWTAAPLAWP*LSAMSF
Trigger: GAAGGACATTGCGGACAGCCACGGCCAGGCCAGAGG...AGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR CCA 90 bp CAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTCACTCCCTCTGGCCTaGCCGTGGCTGTCCGCAATG +
Preference number: 2 (lower is better)
Translates to: QGPGARMLRLMGYSLEKSSLPLA*PWLSAM
Trigger: CATTGCGGACAGCCACGGCCAGGCCAGAGGGAGTGA...GCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR CCA 90 bp TGGGCCCCGGCAGCCGTGAACTTGTTGTACTGGACGTCCATCACCCGGAGGGACAGTTTGGGGAAAGCCTaGGGGCCTGAGACAGGGCCC +
Preference number: 2 (lower is better)
Translates to: WAPAAVNLLYWTSITRRDSLGKA*GPETGP
Trigger: GGGCCCTGTCTCAGGCCCCCAGGCTTTCCCCAAACT...GTCCCTCCGGGTGATGGACGTCCAGTACAACAAGTTCACGGCTGCCGGGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000618207.4
3UTR CAA 90 bp GGAGGCACTGGGCAAGTGCTGCCCTTCCAGAGGGCTCAGGGAGTCTaGGGCGTGACCAGCTGGAGGCACGTGGTAGACCAGGCATCTTCA +
Preference number: 2 (lower is better)
Translates to: GGTGQVLPFQRAQGV*GVTSWRHVVDQASS
Trigger: TGAAGATGCCTGGTCTACCACGTGCCTCCAGCTGGTCACGCCCAAGACTCCCTGAGCCCTCTGGAAGGGCAGCACTTGCCCAGTGCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR TCA 90 bp CGCAGCAGCGGATCAGATCAGCTCTCAGGGCCCCGACACCCCCTGAGCACCTACCCCCAGGGAAAAAGGTaGGCGTCAGGAGGGAGACAT +
Preference number: 2 (lower is better)
Translates to: RSSGSDQLSGPRHPLSTYPQGKR*ASGGRH
Trigger: ATGTCTCCCTCCTGACGCTCACCTTTTTCCCTGGGG...GTAGGTGCTCAGGGGGTGTCGGGGCCCTGAGAGCTGATCTGATCCGCTGCTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR TCA 90 bp GCAGACCCGAACCAGGAAAGCAACTCAGACGCTAGGGCCCCGAGGGGCGGAGCGGCTCCCAAATCCATTTaGGGCAGAGCTGTCAGCTCC +
Preference number: 2 (lower is better)
Translates to: ADPNQESNSDARAPRGGAAPKSI*GRAVSS
Trigger: GGAGCTGACAGCTCTGCCTCAAATGGATTTGGGAGC...CGCTCCGCCCCTCGGGGCCCTAGCGTCTGAGTTGCTTTCCTGGTTCGGGTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR-3UTR GCA 90 bp GTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCGGGTTGTCCTCAGAGAACATaGCTGTCCAGAGCACAGCTG +
Preference number: 2 (lower is better)
Translates to: VVHSAAGQGPTLNQQGPGCPQRT*LSRAQL
Trigger: CAGCTGTGCTCTGGACAGGCATGTTCTCTGAGGACA...ACCCGGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR GCA 90 bp GTGACCAGCTGGAGGCACGTGGTAGACCAGGCATCTTCACAAAGCCCGCTGCTGGGAGGAAGACTTCCCTaGCCCACCCCAAGCCTCCCG +
Preference number: 2 (lower is better)
Translates to: VTSWRHVVDQASSQSPLLGGRLP*PTPSLP
Trigger: CGGGAGGCTTGGGGTGGGGCAGGGAAGTCTTCCTCC...CAGCAGCGGGCTTTGTGAAGATGCCTGGTCTACCACGTGCCTCCAGCTGGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR GCA 90 bp CTGGCCGGAGGCTGGCTCCTGGTTGAACAGCGCAGGCAGTGGCAGGCAGGGCAGCTTCTCAGCCCTGGCTaGAGCTGTGTTGATCAGCAA +
Preference number: 2 (lower is better)
Translates to: LAGGWLLVEQRRQWQAGQLLSPG*SCVDQQ
Trigger: TTGCTGATCAACACAGCTGCAGCCAGGGCTGAGAAG...CTGCCCTGCCTGCCACTGCCTGCGCTGTTCAACCAGGAGCCAGCCTCCGGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571186.5
3UTR-3UTR CCA 90 bp CGCAGCAGCGGATCAGATCAGCTCTCAGGGCCCCGACACCCCCTGAGCACCTACAGGCATCCACCCAACTaGGCGCTAAAGGAGCCTGGA +
Preference number: 2 (lower is better)
Translates to: RSSGSDQLSGPRHPLSTYRHPPN*ALKEPG
Trigger: TCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCT...GTAGGTGCTCAGGGGGTGTCGGGGCCCTGAGAGCTGATCTGATCCGCTGCTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR CCA 90 bp TGGGCATGGGAACACGAGGTGCTACAGAGACACTGGCACCCGGCTAGGCACACAGCCTCCCGAGCCTGGTaGATTGGTCCCTGTCCCCAG +
Preference number: 2 (lower is better)
Translates to: WAWEHEVLQRHWHPARHTASRAW*IGPCPQ
Trigger: CTGGGGACAGGGACCAATCCACCAGGCTCGGGAGGC...TGTGTGCCTAGCCGGGTGCCAGTGTCTCTGTAGCACCTCGTGTTCCCATGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR CCA 90 bp CATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGGACACCTCCGAAGGCTaGCAGCGAGCTGCTGGGCCC +
Preference number: 2 (lower is better)
Translates to: HQCLLSARCALSRCLVGEDTSEG*QRAAGP
Trigger: GGGCCCAGCAGCTCGCTGCCAGCCTTCGGAGGTGTC...CTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618207.4
3UTR-3UTR TCA 90 bp GCCCAGCCTGTTGCAATCTGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTGAAAGCCTGGGGGCCTaGGACAGGGCCCAGCGCAAA +
Preference number: 2 (lower is better)
Translates to: AQPVAIWGISRLGVAHQCESLGA*DRAQRK
Trigger: TTTGCGCTGGGCCCTGTCTCAGGCCCCCAGGCTTTC...ACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCAGATTGCAACAGGCTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000618207.4
3UTR-3UTR TCA 90 bp GGGGCGCTAGCAAGGGAGAGGGAGGAATTCCCAGGCCGGATACACACCCCTCCCAAAGGGGACAGCTGGTaGAAAGGAAGGAGACCCCGA +
Preference number: 2 (lower is better)
Translates to: GALAREREEFPGRIHTPPKGDSW*KGRRPR
Trigger: TCGGGGTCTCCTTCCTTTTCACCAGCTGTCCCCTTT...GGGAGGGGTGTGTATCCGGCCTGGGAATTCCTCCCTCTCCCTTGCTAGCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR-3UTR CCA 90 bp CTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTCAGCAGAGCAAGATGTaGTTCATTCCGCAGCCGGGC +
Preference number: 2 (lower is better)
Translates to: LSAMSFREGLGAPGWTAAQQSKM*FIPQPG
Trigger: GCCCGGCTGCGGAATGAACCACATCTTGCTCTGCTG...AGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR CCA 90 bp CAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCAGGCATCCACCCAACTaGGCGCTAAAGGAGCCTGGA +
Preference number: 2 (lower is better)
Translates to: QGPGARMLRLMGYSLEKSRHPPN*ALKEPG
Trigger: TCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCT...GCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR CCA 90 bp CAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGCCTCTGGCCTGGCCGTaGCTGTCCGCAATGTCCTTC +
Preference number: 2 (lower is better)
Translates to: QCLLSARCALSRCLVGEQPLAWP*LSAMSF
Trigger: GAAGGACATTGCGGACAGCCACGGCCAGGCCAGAGG...CTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR CCA 90 bp GCCGTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACGAAGTACTTTCTCTGTaGCCCGGTGCAGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: AVAVRNVLQRRPRGSWVDEVLSL*PGAVAH
Trigger: GTGAGCCACTGCACCGGGCCACAGAGAAAGTACTTC...GTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCACGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR CCA 90 bp CGCAGCAGCGGATCAGATCAGCTCTCAGGGCCCCGACACCCCCTGAGCACCTACAACCTGGTGGCAGGGTaGGGCTTCCGTGCTAATAAC +
Preference number: 2 (lower is better)
Translates to: RSSGSDQLSGPRHPLSTYNLVAG*GFRANN
Trigger: GTTATTAGCACGGAAGCCCCACCCTGCCACCAGGTT...GTAGGTGCTCAGGGGGTGTCGGGGCCCTGAGAGCTGATCTGATCCGCTGCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CAA 90 bp TGGGGGAAGGTGGCTGAGAGCTGCGAGACACCCTCGTCCCCGATCTaGTTCTCACTCAGCGCATCCAGGTCCAGATGCTGCAGGGAGGAA +
Preference number: 2 (lower is better)
Translates to: WGKVAESCETPSSPI*FSLSASRSRCCREE
Trigger: TTCCTCCCTGCAGCATCTGGACCTGGATGCGCTGAGTGAGAACAAGATCGGGGACGAGGGTGTCTCGCAGCTCTCAGCCACCTTCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618207.4
3UTR-3UTR GCA 90 bp TGTCTGGTCGGAGAGCAGGGTGGAGAAGTACTTTCTCTGTGGCCCGGTGCAGTGTGGGTGGACCGCAGCTaGCACCAGGCATCCACCCAA +
Preference number: 2 (lower is better)
Translates to: CLVGEQGGEVLSLWPGAVWVDRS*HQASTQ
Trigger: TTGGGTGGATGCCTGGTGGCAGCTGCGGTCCACCCA...CACTGCACCGGGCCACAGAGAAAGTACTTCTCCACCCTGCTCTCCGACCAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR CCA 90 bp TGGGGTCACCTCCCTGTCCTCGACTCACTGTGTGACTTCAGGCAGAGGTCACCATCACTCCCTCTGGCCTaGCCGTGGCTGTCCGCAATG +
Preference number: 2 (lower is better)
Translates to: WGHLPVLDSLCDFRQRSPSLPLA*PWLSAM
Trigger: CATTGCGGACAGCCACGGCCAGGCCAGAGGGAGTGA...TGGTGACCTCTGCCTGAAGTCACACAGTGAGTCGAGGACAGGGAGGTGACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR CCA 90 bp AGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGGGGGAATTAGCAGGCTaGGGGTTGCCCATCAGTGTC +
Preference number: 2 (lower is better)
Translates to: RLGVAHQCLLSARCALSRGELAG*GLPISV
Trigger: GACACTGATGGGCAACCCCCAGCCTGCTAATTCCCC...CCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR CCA 90 bp TGGGGTCACCTCCCTGTCCTCGACTCACTGTGTGACTTCAGGCAGAGGTCACCAAGCCAGACTAGCGCCTaGCTGGGACTGTCGGGGATG +
Preference number: 2 (lower is better)
Translates to: WGHLPVLDSLCDFRQRSPSQTSA*LGLSGM
Trigger: CATCCCCGACAGTCCCAGCCAGGCGCTAGTCTGGCT...TGGTGACCTCTGCCTGAAGTCACACAGTGAGTCGAGGACAGGGAGGTGACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CAA 90 bp CTTCCTGTAGGTTGCAAAGCATTTTTCCGGGCAAGGTGGAAGGTGTaGCCAAGCCCTGCCCACTACCCAGCGCTGGCTCAGCTGGCCCAG +
Preference number: 2 (lower is better)
Translates to: LPVGCKAFFRARWKV*PSPAHYPALAQLAQ
Trigger: CTGGGCCAGCTGAGCCAGCGCTGGGTAGTGGGCAGGGCTTGGCAACACCTTCCACCTTGCCCGGAAAAATGCTTTGCAACCTACAGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CAA 90 bp TCAGACCCTGAAGGGGCTCTAGCCCAGGAAGCCTTCCCCCTTTCCTaGGGTGCCCTTCCTCCTGAGGACTGGTTACCAAGGAGGGTGTGT +
Preference number: 2 (lower is better)
Translates to: SDPEGALAQEAFPLS*GALPPEDWLPRRVC
Trigger: ACACACCCTCCTTGGTAACCAGTCCTCAGGAGGAAGGGCACCCAAGGAAAGGGGGAAGGCTTCCTGGGCTAGAGCCCCTTCAGGGTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR TCA 90 bp CATCTCAGGCTGATCCGTGAATCCTGTTGTTGCAGGTGTTCCTGGACACTGAATGGCAGGGGCCAACCCTaGACCAGCAGGGGCCGGGTG +
Preference number: 2 (lower is better)
Translates to: HLRLIRESCCCRCSWTLNGRGQP*TSRGRV
Trigger: CACCCGGCCCCTGCTGGTTCAGGGTTGGCCCCTGCC...ATTCAGTGTCCAGGAACACCTGCAACAACAGGATTCACGGATCAGCCTGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618207.4
3UTR-3UTR TCA 90 bp GCCCAGCCTGTTGCAATCTGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTGGGAGGAAAAGGCCGTaGGGATCCGCACCAGTTTGG +
Preference number: 2 (lower is better)
Translates to: AQPVAIWGISRLGVAHQCGRKRP*GSAPVW
Trigger: CCAAACTGGTGCGGATCCTCACGGCCTTTTCCTCCC...ACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCAGATTGCAACAGGCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000618207.4
3UTR-3UTR TCA 90 bp ATTAGCTGTTTCCCTGCTAAGGGCTGGTGCATCTGGCCAGGCCTAGCTTTGGCTCTGGGGGAAGGTGGCTaGGAGCTGCGAGACACCCTC +
Preference number: 2 (lower is better)
Translates to: ISCFPAKGWCIWPGLALALGEGG*ELRDTL
Trigger: GAGGGTGTCTCGCAGCTCTCAGCCACCTTCCCCCAG...AGCCAAAGCTAGGCCTGGCCAGATGCACCAGCCCTTAGCAGGGAAACAGCTAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618207.4
3UTR-3UTR GCA 90 bp CATCTCAGGCTGATCCGTGAATCCTGTTGTTGCAGGTGTTCCTGGACACTGAATAGGCTGGCAGCGAGCTaGTGGGCCCCGGCAGCCGTG +
Preference number: 2 (lower is better)
Translates to: HLRLIRESCCCRCSWTLNRLAAS*WAPAAV
Trigger: CACGGCTGCCGGGGCCCAGCAGCTCGCTGCCAGCCT...ATTCAGTGTCCAGGAACACCTGCAACAACAGGATTCACGGATCAGCCTGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618207.4
3UTR-3UTR GCA 90 bp GGAGAGGGAGGAATTCCCAGGCCGGATACACACCCCTCCCTCAGGCTTCTCCTCCCAGGTCTAACTGGATaGCAGGAATGGCCAGACTCC +
Preference number: 2 (lower is better)
Translates to: GEGGIPRPDTHPSLRLLLPGLTG*QEWPDS
Trigger: GGAGTCTGGCCATTCCTGGCATCCAGTTAGACCTGG...GAGGAGAAGCCTGAGGGAGGGGTGTGTATCCGGCCTGGGAATTCCTCCCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR-3UTR CCA 90 bp AGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCGTTCAAGGTCCAGCGTaGTTAGTGTCCTCAGAGAAC +
Preference number: 2 (lower is better)
Translates to: RCGSFRSRAGANPEPAGAVQGPA*LVSSEN
Trigger: GTTCTCTGAGGACACTAACCACGCTGGACCTTGAAC...GGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR CCA 90 bp AGACAGGCTAAATGCAGATCTCACAGCATTTGCCCTGAGGAGCAGGACAGCGGGCTCTGTCACTCCCTCTaGCCTGGCCGTGGCTGTCCG +
Preference number: 2 (lower is better)
Translates to: RQAKCRSHSICPEEQDSGLCHSL*PGRGCP
Trigger: CGGACAGCCACGGCCAGGCCAGAGGGAGTGACAGAG...CCCGCTGTCCTGCTCCTCAGGGCAAATGCTGTGAGATCTGCATTTAGCCTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR CCA 90 bp GACGTGGTCAGTGTCAATGGCGTGTCAGACCCTGAAGGGGCTCTAGCCCAGGAACCCTGTCAAGGTGTCTaGTCGGAGAGCAGGGTGGAG +
Preference number: 2 (lower is better)
Translates to: DVVSVNGVSDPEGALAQEPCQGV*SESRVE
Trigger: CTCCACCCTGCTCTCCGACCAGACACCTTGACAGGG...TTCCTGGGCTAGAGCCCCTTCAGGGTCTGACACGCCATTGACACTGACCACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR CCA 90 bp TGGGCATGGGAACACGAGGTGCTACAGAGACACTGGCACCCGGCTAGGCACACACCAGCTCTCACTTGCTaGGGAGAGGAGCAGAGCTTG +
Preference number: 2 (lower is better)
Translates to: WAWEHEVLQRHWHPARHTPALTC*GEEQSL
Trigger: CAAGCTCTGCTCCTCTCCCCAGCAAGTGAGAGCTGG...TGTGTGCCTAGCCGGGTGCCAGTGTCTCTGTAGCACCTCGTGTTCCCATGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR CCA 90 bp GCAGACCCGAACCAGGAAAGCAACTCAGACGCTAGGGCCCCGAGGGGCGGAGCGGATGACCTTGGCTTTTaGGGGATTCTCGCTTGTCAT +
Preference number: 2 (lower is better)
Translates to: ADPNQESNSDARAPRGGADDLGF*GILACH
Trigger: ATGACAAGCGAGAATCCCCCAAAAGCCAAGGTCATC...CGCTCCGCCCCTCGGGGCCCTAGCGTCTGAGTTGCTTTCCTGGTTCGGGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR-3UTR TCA 90 bp GCTTTGGCTTTGGCCAACAATGTCAGTGCATTGAGTCCCATAGACAAAAGCAGCGGCAGGGGCCAACCCTaGACCAGCAGGGGCCGGGTG +
Preference number: 2 (lower is better)
Translates to: ALALANNVSALSPIDKSSGRGQP*TSRGRV
Trigger: CACCCGGCCCCTGCTGGTTCAGGGTTGGCCCCTGCC...GCTGCTTTTGTCTATGGGACTCAATGCACTGACATTGTTGGCCAAAGCCAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR TCA 90 bp TGGGCATGGGAACACGAGGTGCTACAGAGACACTGGCACCCGGCTAGGCACACAGGCTGCAGTGAGCCGTaGTCATACCACTGCATTCCA +
Preference number: 2 (lower is better)
Translates to: WAWEHEVLQRHWHPARHTGCSEP*SYHCIP
Trigger: TGGAATGCAGTGGTATGATCACGGCTCACTGCAGCC...TGTGTGCCTAGCCGGGTGCCAGTGTCTCTGTAGCACCTCGTGTTCCCATGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR GCA 90 bp TGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTGCATCCAGGTCCAGATaGTGCAGGGAGGAAAAGGCC +
Preference number: 2 (lower is better)
Translates to: WGISRLGVAHQCLLSARCASRSR*CREEKA
Trigger: GGCCTTTTCCTCCCTGCAGCATCTGGACCTGGATGC...ACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000618207.4
3UTR-3UTR CCA 90 bp CAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCGTTCAAGGTCCAGCGTaGTTAGTGTCCTCAGAGAAC +
Preference number: 2 (lower is better)
Translates to: QGPGARMLRLMGYSLEKSVQGPA*LVSSEN
Trigger: GTTCTCTGAGGACACTAACCACGCTGGACCTTGAAC...GCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR CCA 90 bp GCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGTCATGGGATACAGCCTaGAGAAGAGCTGTGTCCACA +
Preference number: 2 (lower is better)
Translates to: ARCGSFRSRAGANPEPAGSWDTA*RRAVST
Trigger: TGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGA...CCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR CCA 90 bp CCCAGCCTGTTGCAATCTGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCAAGGGCTGGTGCATCTaGCCAGGCCTAGCTTTGGCT +
Preference number: 2 (lower is better)
Translates to: PSLLQSGELAGWGLPISVKGWCI*PGLALA
Trigger: AGCCAAAGCTAGGCCTGGCCAGATGCACCAGCCCTT...GACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCAGATTGCAACAGGCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR CCA 90 bp TGGGAATCTGGTCGGTTTTCTCCAGGCGCATCTGGCCGGAGGCTGGCTCCTGGTTCAGCTGTGAGGAAGTaGGCTGTGTTAGAGACTGGG +
Preference number: 2 (lower is better)
Translates to: WESGRFSPGASGRRLAPGSAVRK*AVLETG
Trigger: CCCAGTCTCTAACACAGCCCACTTCCTCACAGCTGA...ACCAGGAGCCAGCCTCCGGCCAGATGCGCCTGGAGAAAACCGACCAGATTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571186.5
3UTR-3UTR CCA 90 bp TCAACGAGGAACTGGAGAAAGGCATGGGAATCTGGTCGGTTTTCTCCAGGCGCAGCAGGCAGGGCAGGGTaGAGCAGTCGCTCACTGGTC +
Preference number: 2 (lower is better)
Translates to: STRNWRKAWESGRFSPGAAGRAG*SSRSLV
Trigger: GACCAGTGAGCGACTGCTCCACCCTGCCCTGCCTGC...TGCGCCTGGAGAAAACCGACCAGATTCCCATGCCTTTCTCCAGTTCCTCGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571186.5
3UTR-3UTR CCA 90 bp TCAACGAGGAACTGGAGAAAGGCATGGGAATCTGGTCGGTTTTCTCCAGGCGCAGAACAGCGCAGGCAGTaGCAGGCAGGGCAGGGTGGA +
Preference number: 2 (lower is better)
Translates to: STRNWRKAWESGRFSPGAEQRRQ*QAGQGG
Trigger: TCCACCCTGCCCTGCCTGCCACTGCCTGCGCTGTTC...TGCGCCTGGAGAAAACCGACCAGATTCCCATGCCTTTCTCCAGTTCCTCGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571186.5
3UTR-3UTR CCA 90 bp GGAGAGGGAGGAATTCCCAGGCCGGATACACACCCCTCCCTCAGGCTTCTCCTCCTCCAGTCCTCATCCTaGCTTGATGATGACCTTGGC +
Preference number: 2 (lower is better)
Translates to: GEGGIPRPDTHPSLRLLLLQSSS*LDDDLG
Trigger: GCCAAGGTCATCATCAAGCCAGGATGAGGACTGGAG...GAGGAGAAGCCTGAGGGAGGGGTGTGTATCCGGCCTGGGAATTCCTCCCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR-3UTR CCA 90 bp AACCAGGAAAGCAACTCAGACGCTAGGGCCCCGAGGGGCGGAGCGAAGCGGTACCTTAAGCCCTTCGTTTaGGCTGGAAAGCTTCCTCCA +
Preference number: 2 (lower is better)
Translates to: NQESNSDARAPRGGAKRYLKPFV*AGKLPP
Trigger: TGGAGGAAGCTTTCCAGCCCAAACGAAGGGCTTAAG...GTACCGCTTCGCTCCGCCCCTCGGGGCCCTAGCGTCTGAGTTGCTTTCCTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR CAA 90 bp TTGGCAAGCAGAACCCAGACTGGTTTGCAGCCCCCATGTTCCCCCTaGTCCCAGGTGCCTTTGTGCAGTGTACAGACTGGCCAACCTCAC +
Preference number: 2 (lower is better)
Translates to: LASRTQTGLQPPCSP*SQVPLCSVQTGQPH
Trigger: GTGAGGTTGGCCAGTCTGTACACTGCACAAAGGCACCTGGGACAAGGGGGAACATGGGGGCTGCAAACCAGTCTGGGTTCTGCTTGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR TCA 90 bp CCCAGCCTGTTGCAATCTGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCGGTGGGTGGATCACCTaGGGTCAAGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: PSLLQSGELAGWGLPISVGGWIT*GQEFET
Trigger: GGTCTCAAACTCTTGACCTCAGGTGATCCACCCACC...GACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCAGATTGCAACAGGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR TCA 90 bp GACGTGGTCAGTGTCAATGGCGTGTCAGACCCTGAAGGGGCTCTAGCCCAGGAAGTCCCCTTTTCCAGATaGGGAAACTGGCCCAGAGAG +
Preference number: 2 (lower is better)
Translates to: DVVSVNGVSDPEGALAQEVPFSR*GNWPRE
Trigger: CTCTCTGGGCCAGTTTCCTCATCTGGAAAAGGGGAC...TTCCTGGGCTAGAGCCCCTTCAGGGTCTGACACGCCATTGACACTGACCACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR TCA 90 bp TTTCTCCAGGCGCATCTGGCCGGAGGCTGGCTCCTGGTTGAACAGCGCAGGCAGCATGGATGTCTCTCCTaGCAGAGGAAATGCTTGTCA +
Preference number: 2 (lower is better)
Translates to: FLQAHLAGGWLLVEQRRQHGCLS*QRKCLS
Trigger: TGACAAGCATTTCCTCTGTCAGGAGAGACATCCATG...CTGCCTGCGCTGTTCAACCAGGAGCCAGCCTCCGGCCAGATGCGCCTGGAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571186.5
3UTR-3UTR GCA 90 bp GATGGGTCCCTCAGGGAGATTCAGGCAGCTCAACGAGGAACTGGAGAAAGGCATTCAGCAACTGCTCTGTaGCAGGCAGTCCCCCAGTCC +
Preference number: 2 (lower is better)
Translates to: DGSLREIQAAQRGTGERHSATAL*QAVPQS
Trigger: GGACTGGGGGACTGCCTGGCACAGAGCAGTTGCTGA...ATGCCTTTCTCCAGTTCCTCGTTGAGCTGCCTGAATCTCCCTGAGGGACCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571186.5
3UTR-3UTR GCA 90 bp GGTCCCTCAGGGAGATTCAGGCAGCTCAACGAGGAACTGGAGAAAGGCATGGGAGTGTTAGAGACTGGGTaGTTGGAGGGGCCTTCCTGG +
Preference number: 2 (lower is better)
Translates to: GPSGRFRQLNEELEKGMGVLETG*LEGPSW
Trigger: CCAGGAAGGCCCCTCCAAGCACCCAGTCTCTAACAC...TCCCATGCCTTTCTCCAGTTCCTCGTTGAGCTGCCTGAATCTCCCTGAGGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571186.5
3UTR-3UTR GCA 90 bp GCCGTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCTCCCACGTCGCAGATaGAGTTATTGTACAAGCTTA +
Preference number: 2 (lower is better)
Translates to: AVAVRNVLQRRPRGSWVDLPRRR*SYCTSL
Trigger: TAAGCTTGTACAATAACTGCATCTGCGACGTGGGAG...GTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618207.4
3UTR-3UTR CCA 90 bp GCTTTGGCCAACAATGTCAGTGCATTGAGTCCCATAGACAAAAGCAGCTGCCACAGGGTGGCAGGGGCCTaGGCAGGCAGAATGGGGCTG +
Preference number: 2 (lower is better)
Translates to: ALANNVSALSPIDKSSCHRVAGA*AGRMGL
Trigger: CAGCCCCATTCTGCCTGCCCAGGCCCCTGCCACCCT...GTGGCAGCTGCTTTTGTCTATGGGACTCAATGCACTGACATTGTTGGCCAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR CCA 90 bp CCCAGCCTGTTGCAATCTGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCGAAGTACTTTCTCTGTaGCCCGGTGCAGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: PSLLQSGELAGWGLPISVEVLSL*PGAVAH
Trigger: GTGAGCCACTGCACCGGGCCACAGAGAAAGTACTTC...GACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCAGATTGCAACAGGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR CCA 90 bp GACGTGGTCAGTGTCAATGGCGTGTCAGACCCTGAAGGGGCTCTAGCCCAGGAACAGCCTGTTGCAATCTaGGGAATTAGCAGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: DVVSVNGVSDPEGALAQEQPVAI*GISRLG
Trigger: CCCCAGCCTGCTAATTCCCCAGATTGCAACAGGCTG...TTCCTGGGCTAGAGCCCCTTCAGGGTCTGACACGCCATTGACACTGACCACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR CCA 90 bp GGTCCCTCAGGGAGATTCAGGCAGCTCAACGAGGAACTGGAGAAAGGCATGGGAGGCTGTGTTAGAGACTaGGTGCTTGGAGGGGCCTTC +
Preference number: 2 (lower is better)
Translates to: GPSGRFRQLNEELEKGMGGCVRD*VLGGAF
Trigger: GAAGGCCCCTCCAAGCACCCAGTCTCTAACACAGCC...TCCCATGCCTTTCTCCAGTTCCTCGTTGAGCTGCCTGAATCTCCCTGAGGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571186.5
3UTR-3UTR CCA 90 bp CTCAGGGAGATTCAGGCAGCTCAACGAGGAACTGGAGAAAGGCATGGGAATCTGCATCTGGCCGGAGGCTaGCTCCTGGTTGAACAGCGC +
Preference number: 2 (lower is better)
Translates to: LREIQAAQRGTGERHGNLHLAGG*LLVEQR
Trigger: GCGCTGTTCAACCAGGAGCCAGCCTCCGGCCAGATG...CAGATTCCCATGCCTTTCTCCAGTTCCTCGTTGAGCTGCCTGAATCTCCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571186.5
3UTR-3UTR CCA 90 bp CAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTTCAGCTGGGGGAAGGTaGCTGAGAGCTGCGAGACAC +
Preference number: 2 (lower is better)
Translates to: QPGEELCPQVPSSRSSVVSAGGR*LRAARH
Trigger: GTGTCTCGCAGCTCTCAGCCACCTTCCCCCAGCTGA...AACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618207.4
3UTR-3UTR TCA 90 bp TGGGGTCACCTCCCTGTCCTCGACTCACTGTGTGACTTCAGGCAGAGGTCACCATCAGAAAAGAGGACTTaGGCCAAGGTGGGCTCTGGT +
Preference number: 2 (lower is better)
Translates to: WGHLPVLDSLCDFRQRSPSEKRT*AKVGSG
Trigger: ACCAGAGCCCACCTTGGCTCAAGTCCTCTTTTCTGA...TGGTGACCTCTGCCTGAAGTCACACAGTGAGTCGAGGACAGGGAGGTGACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR CCA 90 bp CAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTAGGCATCCACCCAACTaGGCGCTAAAGGAGCCTGGA +
Preference number: 2 (lower is better)
Translates to: QPGEELCPQVPSSRSSVVRHPPN*ALKEPG
Trigger: TCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCT...AACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR CCA 90 bp AACCAGAGCAGTGGGTACCCCAAAATGGTAACAGGGTATGAACTCAAACCCTGGCTCTGTCACTCCCTCTaGCCTGGCCGTGGCTGTCCG +
Preference number: 2 (lower is better)
Translates to: NQSSGYPKMVTGYELKPWLCHSL*PGRGCP
Trigger: CGGACAGCCACGGCCAGGCCAGAGGGAGTGACAGAG...CCAGGGTTTGAGTTCATACCCTGTTACCATTTTGGGGTACCCACTGCTCTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR CCA 90 bp TGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTGGTCGGAGAGCAGGGTaGAGAAGTACTTTCTCTGTG +
Preference number: 2 (lower is better)
Translates to: WGISRLGVAHQCLLSARCGRRAG*RSTFSV
Trigger: CACAGAGAAAGTACTTCTCCACCCTGCTCTCCGACC...ACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR CCA 90 bp GTGACCAGCTGGAGGCACGTGGTAGACCAGGCATCTTCACAAAGCCCGCTGCTGCCTAAATTTGAGGGATaGAGGAAGACTTCCCTGCCC +
Preference number: 2 (lower is better)
Translates to: VTSWRHVVDQASSQSPLLPKFEG*RKTSLP
Trigger: GGGCAGGGAAGTCTTCCTCCATCCCTCAAATTTAGG...CAGCAGCGGGCTTTGTGAAGATGCCTGGTCTACCACGTGCCTCCAGCTGGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR CCA 90 bp GTGACCAGCTGGAGGCACGTGGTAGACCAGGCATCTTCACAAAGCCCGCTGCTGTCTGCTAAGGTCTCATaGCACTTAGCAGGGTCCTCA +
Preference number: 2 (lower is better)
Translates to: VTSWRHVVDQASSQSPLLSAKVS*HLAGSS
Trigger: TGAGGACCCTGCTAAGTGCCATGAGACCTTAGCAGA...CAGCAGCGGGCTTTGTGAAGATGCCTGGTCTACCACGTGCCTCCAGCTGGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR CCA 90 bp GGAGAGGGAGGAATTCCCAGGCCGGATACACACCCCTCCCTCAGGCTTCTCCTCTACCCCCAAAGCTTATaGAAAAAGCCTTCGCTCCCA +
Preference number: 2 (lower is better)
Translates to: GEGGIPRPDTHPSLRLLLYPQSL*KKPSLP
Trigger: TGGGAGCGAAGGCTTTTTCCATAAGCTTTGGGGGTA...GAGGAGAAGCCTGAGGGAGGGGTGTGTATCCGGCCTGGGAATTCCTCCCTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR CAA 90 bp GAGGGAAGGAACCACCCTGTACTGATGTCTCGTGTGTGCTGGGTATaGTCAGGCACTCCATGGACACAAACAGCCCAATGTGGTGGGCAC +
Preference number: 2 (lower is better)
Translates to: EGRNHPVLMSRVCWV*SGTPWTQTAQCGGH
Trigger: GTGCCCACCACATTGGGCTGTTTGTGTCCATGGAGTGCCTGACAATACCCAGCACACACGAGACATCAGTACAGGGTGGTTCCTTCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR TCA 90 bp TGGGGTCACCTCCCTGTCCTCGACTCACTGTGTGACTTCAGGCAGAGGTCACCAGAGCTATTTACAAGCTaGACCTGGATGGCAGCACCT +
Preference number: 2 (lower is better)
Translates to: WGHLPVLDSLCDFRQRSPELFTS*TWMAAP
Trigger: AGGTGCTGCCATCCAGGTTCAGCTTGTAAATAGCTC...TGGTGACCTCTGCCTGAAGTCACACAGTGAGTCGAGGACAGGGAGGTGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR TCA 90 bp ATTCAGGCAGCTCAACGAGGAACTGGAGAAAGGCATGGGAATCTGGTCGGTTTTAGGCTGGCTCCTGGTTaGACAGCGCAGGCAGTGGCA +
Preference number: 2 (lower is better)
Translates to: IQAAQRGTGERHGNLVGFRLAPG*TAQAVA
Trigger: TGCCACTGCCTGCGCTGTTCAACCAGGAGCCAGCCT...AAAACCGACCAGATTCCCATGCCTTTCTCCAGTTCCTCGTTGAGCTGCCTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571186.5
3UTR-3UTR TCA 90 bp ATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGTGTACAAGCTTAGCCTaGGCAGGGATGCAGCGAGCG +
Preference number: 2 (lower is better)
Translates to: IQPGEELCPQVPSSRSSVCTSLA*AGMQRA
Trigger: CGCTCGCTGCATCCCTGCTCAGGCTAAGCTTGTACA...CACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618207.4
3UTR-3UTR GCA 90 bp AGTGGGTACCCCAAAATGGTAACAGGGTATGAACTCAAACCCTGGACCTGCCTGCAGGCAGAATGGGGCTaGCTCTGTCACTCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: SGYPKMVTGYELKPWTCLQAEWG*LCHSLW
Trigger: CCAGAGGGAGTGACAGAGGCAGCCCCATTCTGCCTG...CAGGCAGGTCCAGGGTTTGAGTTCATACCCTGTTACCATTTTGGGGTACCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR GCA 90 bp GGGGCGCTAGCAAGGGAGAGGGAGGAATTCCCAGGCCGGATACACACCCCTCCCGATTCTCGCTTGTCATaGTTTGCAGTTGGACATATT +
Preference number: 2 (lower is better)
Translates to: GALAREREEFPGRIHTPPDSRLS*FAVGHI
Trigger: AATATGTCCAACTGCAAAGCATGACAAGCGAGAATC...GGGAGGGGTGTGTATCCGGCCTGGGAATTCCTCCCTCTCCCTTGCTAGCGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR-3UTR CCA 90 bp TCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGGGTGGTCAGTGATGTTGTTCTaGGACAGATTGAGGGTTTCC +
Preference number: 2 (lower is better)
Translates to: SSECPVCPVKVSGRRAGWSVMLF*DRLRVS
Trigger: GGAAACCCTCAATCTGTCCCAGAACAACATCACTGA...CCACCCTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618207.4
3UTR-3UTR CCA 90 bp CATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGTGTTGCAGGTGTTCCTaGACACTGAATGGGATGGTG +
Preference number: 2 (lower is better)
Translates to: HQCLLSARCALSRCLVGECCRCS*TLNGMV
Trigger: CACCATCCCATTCAGTGTCCAGGAACACCTGCAACA...CTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618207.4
3UTR CAA 90 bp AAGTTCGATGACTCATCTCAGATACCCATCTATGAGGTGGCAGCATaGGGCTCCTGGCCACGCTGTCCTGATGTTTCCCCCAGTGAGGTG +
Preference number: 2 (lower is better)
Translates to: KFDDSSQIPIYEVAA*GSWPRCPDVSPSEV
Trigger: CACCTCACTGGGGGAAACATCAGGACAGCGTGGCCAGGAGCCCAATGCTGCCACCTCATAGATGGGTATCTGAGATGAGTCATCGAACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR TCA 90 bp ATTAGCTGTTTCCCTGCTAAGGGCTGGTGCATCTGGCCAGGCCTAGCTTTGGCTAAAAGCAGCTGCCACTaGAGCCCAGCCTGTTGCAAT +
Preference number: 2 (lower is better)
Translates to: ISCFPAKGWCIWPGLALAKSSCH*SPACCN
Trigger: ATTGCAACAGGCTGGGCTTCAGTGGCAGCTGCTTTT...AGCCAAAGCTAGGCCTGGCCAGATGCACCAGCCCTTAGCAGGGAAACAGCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR TCA 90 bp GTCAGGCACTCCATGGACACAAACAGCCCAATGTGGTGGGCACTGTCCCCTTTTTTGAATTGGGGCTTCTaGGCAGACTATGCCCGAGTG +
Preference number: 2 (lower is better)
Translates to: VRHSMDTNSPMWWALSPFLNWGF*ADYARV
Trigger: CACTCGGGCATAGTCTGCTCAGAAGCCCCAATTCAA...AAAAGGGGACAGTGCCCACCACATTGGGCTGTTTGTGTCCATGGAGTGCCTGAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR TCA 90 bp CTTTCAGAGCCTCACCCACCAGTGCGCGTAAAACGCCAGGGCCATCTTCTTACTTGGAGATCTCTGCAGTaGGCATCTGTGCGGCTGAAT +
Preference number: 2 (lower is better)
Translates to: LSEPHPPVRVKRQGHLLTWRSLQ*ASVRLN
Trigger: ATTCAGCCGCACAGATGCTCACTGCAGAGATCTCCA...AGTAAGAAGATGGCCCTGGCGTTTTACGCGCACTGGTGGGTGAGGCTCTGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR TCA 90 bp GCTTTGGCTTTGGCCAACAATGTCAGTGCATTGAGTCCCATAGACAAAAGCAGCGCCAGCGTCTCCACATaGGGACACCTCCGAAGGCTG +
Preference number: 2 (lower is better)
Translates to: ALALANNVSALSPIDKSSASVST*GHLRRL
Trigger: CAGCCTTCGGAGGTGTCCTCATGTGGAGACGCTGGC...GCTGCTTTTGTCTATGGGACTCAATGCACTGACATTGTTGGCCAAAGCCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618207.4
3UTR-3UTR TCA 90 bp CCCCGCCTCCTTTTAAAGGAGAAACGGAGTCCCAAAGAGGCATGCAGCAAGGTGATTCGATTTGAGATCTaGGGGCAGACCCGAACCAGG +
Preference number: 2 (lower is better)
Translates to: PRLLLKEKRSPKEACSKVIRFEI*GQTRTR
Trigger: CCTGGTTCGGGTCTGCCCTCAGATCTCAAATCGAAT...CACCTTGCTGCATGCCTCTTTGGGACTCCGTTTCTCCTTTAAAAGGAGGCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR-3UTR GCA 90 bp CTTTCAGAGCCTCACCCACCAGTGCGCGTAAAACGCCAGGGCCATCTTCTTACTTGTCCTCAGAGAACATaGCTGTCCAGAGCACAGCTG +
Preference number: 2 (lower is better)
Translates to: LSEPHPPVRVKRQGHLLTCPQRT*LSRAQL
Trigger: CAGCTGTGCTCTGGACAGGCATGTTCTCTGAGGACA...AGTAAGAAGATGGCCCTGGCGTTTTACGCGCACTGGTGGGTGAGGCTCTGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR CCA 90 bp ATTAGCTGTTTCCCTGCTAAGGGCTGGTGCATCTGGCCAGGCCTAGCTTTGGCTGGTCGGAGAGCAGGGTaGAGAAGTACTTTCTCTGTG +
Preference number: 2 (lower is better)
Translates to: ISCFPAKGWCIWPGLALAGRRAG*RSTFSV
Trigger: CACAGAGAAAGTACTTCTCCACCCTGCTCTCCGACC...AGCCAAAGCTAGGCCTGGCCAGATGCACCAGCCCTTAGCAGGGAAACAGCTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR CCA 90 bp CTTTCAGAGCCTCACCCACCAGTGCGCGTAAAACGCCAGGGCCATCTTCTTACTTTTTTCCGGGCAAGGTaGAAGGTGTTGCCAAGCCCT +
Preference number: 2 (lower is better)
Translates to: LSEPHPPVRVKRQGHLLTFFRAR*KVLPSP
Trigger: AGGGCTTGGCAACACCTTCCACCTTGCCCGGAAAAA...AGTAAGAAGATGGCCCTGGCGTTTTACGCGCACTGGTGGGTGAGGCTCTGAAAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR CCA 90 bp AGACAGGCTAAATGCAGATCTCACAGCATTTGCCCTGAGGAGCAGGACAGCGGGCTACACATAGAAACCTaGGGTCACCTCCCTGTCCTC +
Preference number: 2 (lower is better)
Translates to: RQAKCRSHSICPEEQDSGLHIET*GHLPVL
Trigger: GAGGACAGGGAGGTGACCCCAGGTTTCTATGTGTAG...CCCGCTGTCCTGCTCCTCAGGGCAAATGCTGTGAGATCTGCATTTAGCCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR CCA 90 bp ATTAGCTGTTTCCCTGCTAAGGGCTGGTGCATCTGGCCAGGCCTAGCTTTGGCTTTCCTGGACACTGAATaGGATGGTGGGCGTCCACAT +
Preference number: 2 (lower is better)
Translates to: ISCFPAKGWCIWPGLALAFLDTE*DGGRPH
Trigger: ATGTGGACGCCCACCATCCCATTCAGTGTCCAGGAA...AGCCAAAGCTAGGCCTGGCCAGATGCACCAGCCCTTAGCAGGGAAACAGCTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618207.4
3UTR CAA 90 bp TTCCCTGCTAAGGGCTGGTGCATCTGGCCAGGCCTAGCTTTGGCTTaGGCCAACAATGTCAGTGCATTGAGTCCCATAGACAAAAGCAGC +
Preference number: 2 (lower is better)
Translates to: FPAKGWCIWPGLALA*ANNVSALSPIDKSS
Trigger: GCTGCTTTTGTCTATGGGACTCAATGCACTGACATTGTTGGCCAAAGCCAAAGCTAGGCCTGGCCAGATGCACCAGCCCTTAGCAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR CAA 90 bp CAGGCAGCTCCCACTGCCACCAGGAGTAAGCTAAGATGTCTTGAATaGGGGCTTCTGAGCAGACTATGCCCGAGTGAAAAGCAACAGTCG +
Preference number: 2 (lower is better)
Translates to: QAAPTATRSKLRCLE*GLLSRLCPSEKQQS
Trigger: CGACTGTTGCTTTTCACTCGGGCATAGTCTGCTCAGAAGCCCCAATTCAAGACATCTTAGCTTACTCCTGGTGGCAGTGGGAGCTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CAA 90 bp ACGGGGGTTCAAATCCTGGCTCTGCCATTTATGAGCTGTGTGGCCTaGCACGGCTTGCTTAACCTCTCTGAGCTCCATGTGAAATGCAGG +
Preference number: 2 (lower is better)
Translates to: TGVQILALPFMSCVA*HGLLNLSELHVKCR
Trigger: CCTGCATTTCACATGGAGCTCAGAGAGGTTAAGCAAGCCGTGCAAGGCCACACAGCTCATAAATGGCAGAGCCAGGATTTGAACCCCCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CAA 90 bp GCTGTCAGCTCCTCCTCCAGTCCTCATCCTGGCTTGATGATGACCTaGGCTTTTGGGGGATTCTCGCTTGTCATGCTTTGCAGTTGGACA +
Preference number: 2 (lower is better)
Translates to: AVSSSSSPHPGLMMT*AFGGFSLVMLCSWT
Trigger: TGTCCAACTGCAAAGCATGACAAGCGAGAATCCCCCAAAAGCCAAGGTCATCATCAAGCCAGGATGAGGACTGGAGGAGGAGCTGACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR-3UTR TCA 90 bp TGTTCCTTAACTCTAGGATGCAGGTTCCGTAGTGGGCGGACCTTCCAGCAACCAAGAGCGAATTCGATTTaGGATCTGAGGGCAGACCCG +
Preference number: 2 (lower is better)
Translates to: CSLTLGCRFRSGRTFQQPRANSI*DLRADP
Trigger: CGGGTCTGCCCTCAGATCTCAAATCGAATTCGCTCT...TGGTTGCTGGAAGGTCCGCCCACTACGGAACCTGCATCCTAGAGTTAAGGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR-3UTR TCA 90 bp TCCTTAACTCTAGGATGCAGGTTCCGTAGTGGGCGGACCTTCCAGCAACCAGAGGGTGGATCTCCACCATaGAAATTGGCGCTTTGGGAA +
Preference number: 2 (lower is better)
Translates to: SLTLGCRFRSGRTFQQPEGGSPP*KLALWE
Trigger: TTCCCAAAGCGCCAATTTTCATGGTGGAGATCCACC...CTCTGGTTGCTGGAAGGTCCGCCCACTACGGAACCTGCATCCTAGAGTTAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR-3UTR GCA 90 bp AGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACTGTCCTCAGAGAACATaGCTGTCCAGAGCACAGCTG +
Preference number: 2 (lower is better)
Translates to: RMLRLMGYSLEKSCVHKYCPQRT*LSRAQL
Trigger: CAGCTGTGCTCTGGACAGGCATGTTCTCTGAGGACA...GTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR GCA 90 bp GCTTTGGCTTTGGCCAACAATGTCAGTGCATTGAGTCCCATAGACAAAAGCAGCCAGGCAGAATGGGGCTaGCTCTGTCACTCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: ALALANNVSALSPIDKSSQAEWG*LCHSLW
Trigger: CCAGAGGGAGTGACAGAGGCAGCCCCATTCTGCCTG...GCTGCTTTTGTCTATGGGACTCAATGCACTGACATTGTTGGCCAAAGCCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR GCA 90 bp AGTGGGTACCCCAAAATGGTAACAGGGTATGAACTCAAACCCTGGACCTGCCTGTCAGTGTCTTCTGAGTaGCCGGTGTGCCCTGTCAAG +
Preference number: 2 (lower is better)
Translates to: SGYPKMVTGYELKPWTCLSVSSE*PVCPVK
Trigger: CTTGACAGGGCACACCGGGCACTCAGAAGACACTGA...CAGGCAGGTCCAGGGTTTGAGTTCATACCCTGTTACCATTTTGGGGTACCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR GCA 90 bp AGACAGGCTAAATGCAGATCTCACAGCATTTGCCCTGAGGAGCAGGACAGCGGGAGTGAGTTGAGATCATaGCACTGCATTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: RQAKCRSHSICPEEQDSGSELRS*HCIPAW
Trigger: CCAGGCTGGAATGCAGTGGCATGATCTCAACTCACT...CCCGCTGTCCTGCTCCTCAGGGCAAATGCTGTGAGATCTGCATTTAGCCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR GCA 90 bp TCAGGCAGCTCAACGAGGAACTGGAGAAAGGCATGGGAATCTGGTCGGTTTTCTGTGTTGATCAGCAACTaGTCTGTGCCAGGCAGTCCC +
Preference number: 2 (lower is better)
Translates to: SGSSTRNWRKAWESGRFSVLISN*SVPGSP
Trigger: GGGACTGCCTGGCACAGAGCAGTTGCTGATCAACAC...AGAAAACCGACCAGATTCCCATGCCTTTCTCCAGTTCCTCGTTGAGCTGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571186.5
3UTR CAA 90 bp AGCTGTTTCCCTGCTAAGGGCTGGTGCATCTGGCCAGGCCTAGCTTaGGCTTTGGCCAACAATGTCAGTGCATTGAGTCCCATAGACAAA +
Preference number: 2 (lower is better)
Translates to: SCFPAKGWCIWPGLA*ALANNVSALSPIDK
Trigger: TTTGTCTATGGGACTCAATGCACTGACATTGTTGGCCAAAGCCAAAGCTAGGCCTGGCCAGATGCACCAGCCCTTAGCAGGGAAACAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR CAA 90 bp CTTACCCCCAAAGCTTATGGAAAAAGCCTTCGCTCCCAAATCCATTaGAGGCAGAGCTGTCAGCTCCTCCTCCAGTCCTCATCCTGGCTT +
Preference number: 2 (lower is better)
Translates to: LTPKAYGKSLRSQIH*RQSCQLLLQSSSWL
Trigger: AAGCCAGGATGAGGACTGGAGGAGGAGCTGACAGCTCTGCCTCAAATGGATTTGGGAGCGAAGGCTTTTTCCATAAGCTTTGGGGGTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR-3UTR TCA 90 bp TACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGAAAATTAGCCAGACATaGTGGTGGGTGCCTGTAGTC +
Preference number: 2 (lower is better)
Translates to: YSLEKSCVHKYPVQGPAWKISQT*WWVPVV
Trigger: GACTACAGGCACCCACCATCATGTCTGGCTAATTTT...CCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR TCA 90 bp CCTAGCTTTGGCTTTGGCCAACAATGTCAGTGCATTGAGTCCCATAGACAAAAGCCCATCAGTGTCTTCTaGGTGCCCGGTGTGCCCTGT +
Preference number: 2 (lower is better)
Translates to: PSFGFGQQCQCIESHRQKPISVF*VPGVPC
Trigger: ACAGGGCACACCGGGCACTCAGAAGACACTGATGGG...CTTTTGTCTATGGGACTCAATGCACTGACATTGTTGGCCAAAGCCAAAGCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR TCA 90 bp TTTGGCAGCCAACGTGCAAATCCGAAGCCAGGTTTGAGAAAGTGGTCATCATTTCCTGCACTTACAGCCTaGGGACCAAGCAGGCTCTGG +
Preference number: 2 (lower is better)
Translates to: FGSQRANPKPGLRKWSSFPALTA*GPSRLW
Trigger: CCAGAGCCTGCTTGGTCCTCAGGCTGTAAGTGCAGG...AAATGATGACCACTTTCTCAAACCTGGCTTCGGATTTGCACGTTGGCTGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR TCA 90 bp TCCTTAACTCTAGGATGCAGGTTCCGTAGTGGGCGGACCTTCCAGCAACCAGAGTTTGGGGTAGCTCTGTaGCTTACCCCCAAAGCTTAT +
Preference number: 2 (lower is better)
Translates to: SLTLGCRFRSGRTFQQPEFGVAL*LTPKAY
Trigger: ATAAGCTTTGGGGGTAAGTCACAGAGCTACCCCAAA...CTCTGGTTGCTGGAAGGTCCGCCCACTACGGAACCTGCATCCTAGAGTTAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR-3UTR CCA 90 bp AGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACGTTCAAGGTCCAGCGTaGTTAGTGTCCTCAGAGAAC +
Preference number: 2 (lower is better)
Translates to: RMLRLMGYSLEKSCVHKYVQGPA*LVSSEN
Trigger: GTTCTCTGAGGACACTAACCACGCTGGACCTTGAAC...GTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR CCA 90 bp AACCAGAGCAGTGGGTACCCCAAAATGGTAACAGGGTATGAACTCAAACCCTGGCAGCCTGTTGCAATCTaGGGAATTAGCAGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: NQSSGYPKMVTGYELKPWQPVAI*GISRLG
Trigger: CCCCAGCCTGCTAATTCCCCAGATTGCAACAGGCTG...CCAGGGTTTGAGTTCATACCCTGTTACCATTTTGGGGTACCCACTGCTCTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR CCA 90 bp TCCTTAACTCTAGGATGCAGGTTCCGTAGTGGGCGGACCTTCCAGCAACCAGAGCGAAGGGGACACTGGTaGATCTCCACCATGAAAATT +
Preference number: 2 (lower is better)
Translates to: SLTLGCRFRSGRTFQQPERRGHW*ISTMKI
Trigger: AATTTTCATGGTGGAGATCCACCAGTGTCCCCTTCG...CTCTGGTTGCTGGAAGGTCCGCCCACTACGGAACCTGCATCCTAGAGTTAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR CAA 90 bp GACCATTTGGAAGGTGCGTGGACTTACAATCCACTGGACATGGAATaGCACTATCATGCCCTGATTCCTCCGAGCAGCGCTTTACCACCT +
Preference number: 2 (lower is better)
Translates to: DHLEGAWTYNPLDME*HYHALIPPSSALPP
Trigger: AGGTGGTAAAGCGCTGCTCGGAGGAATCAGGGCATGATAGTGCAATTCCATGTCCAGTGGATTGTAAGTCCACGCACCTTCCAAATGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CAA 90 bp AGTCTCTTTTACCTCCCCCTATTCGATACGCAGAGCGAATTCGATTaGAGATCTGAGGGCAGACCCGAACCAGGAAAGCAACTCAGACGC +
Preference number: 2 (lower is better)
Translates to: SLFYLPLFDTQSEFD*RSEGRPEPGKQLRR
Trigger: GCGTCTGAGTTGCTTTCCTGGTTCGGGTCTGCCCTCAGATCTCAAATCGAATTCGCTCTGCGTATCGAATAGGGGGAGGTAAAAGAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR-3UTR GCA 90 bp AACCAGAGCAGTGGGTACCCCAAAATGGTAACAGGGTATGAACTCAAACCCTGGTGTCCTCAGAGAACATaGCTGTCCAGAGCACAGCTG +
Preference number: 2 (lower is better)
Translates to: NQSSGYPKMVTGYELKPWCPQRT*LSRAQL
Trigger: CAGCTGTGCTCTGGACAGGCATGTTCTCTGAGGACA...CCAGGGTTTGAGTTCATACCCTGTTACCATTTTGGGGTACCCACTGCTCTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR GCA 90 bp ATATTAGATAACCAGAGCAGTGGGTACCCCAAAATGGTAACAGGGTATGAACTCCCCAGATCGCACCACTaGACGCCAGCCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: ILDNQSSGYPKMVTGYELPRSHH*TPAWAT
Trigger: TGTTGCCCAGGCTGGCGTGCAGTGGTGCGATCTGGG...GAGTTCATACCCTGTTACCATTTTGGGGTACCCACTGCTCTGGTTATCTAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR CCA 90 bp GCTTTGGCTTTGGCCAACAATGTCAGTGCATTGAGTCCCATAGACAAAAGCAGCGAAGTACTTTCTCTGTaGCCCGGTGCAGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: ALALANNVSALSPIDKSSEVLSL*PGAVAH
Trigger: GTGAGCCACTGCACCGGGCCACAGAGAAAGTACTTC...GCTGCTTTTGTCTATGGGACTCAATGCACTGACATTGTTGGCCAAAGCCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR CCA 90 bp GTCAGGCACTCCATGGACACAAACAGCCCAATGTGGTGGGCACTGTCCCCTTTTGCTCTGGGGAATGGCTaGAATGAAAGGTTACAGTTT +
Preference number: 2 (lower is better)
Translates to: VRHSMDTNSPMWWALSPFALGNG*NERLQF
Trigger: AAACTGTAACCTTTCATTCCAGCCATTCCCCAGAGC...AAAAGGGGACAGTGCCCACCACATTGGGCTGTTTGTGTCCATGGAGTGCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CAA 90 bp GAGACATTTGTATGCAGAGAGAGGCCTGCGAGGAAGAGTGACCATTaGGAAGGTGCGTGGACTTACAATCCACTGGACATGGAATTGCAC +
Preference number: 2 (lower is better)
Translates to: ETFVCRERPARKSDH*EGAWTYNPLDMELH
Trigger: GTGCAATTCCATGTCCAGTGGATTGTAAGTCCACGCACCTTCCAAATGGTCACTCTTCCTCGCAGGCCTCTCTCTGCATACAAATGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CAA 90 bp CTCGTTCTAGAGTCTCTGCCACTTGCCCCTAGACTCTTATCCCTCTaGAGTAGGAGTTTAGCACAGTGTCTGGCACACAGTCATCACTTA +
Preference number: 2 (lower is better)
Translates to: LVLESLPLAPRLLSL*SRSLAQCLAHSHHL
Trigger: TAAGTGATGACTGTGTGCCAGACACTGTGCTAAACTCCTACTCAAGAGGGATAAGAGTCTAGGGGCAAGTGGCAGAGACTCTAGAACGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CAA 90 bp CAATCCGTGGTGCGGCCTGTAGGCTGCATACAGCTCAGGACGGCTTaGACTGTGGCCCAACACAGATTCATAAACTTTCTTAAAACGTTA +
Preference number: 2 (lower is better)
Translates to: QSVVRPVGCIQLRTA*TVAQHRFINFLKTL
Trigger: TAACGTTTTAAGAAAGTTTATGAATCTGTGTTGGGCCACAGTCAAAGCCGTCCTGAGCTGTATGCAGCCTACAGGCCGCACCACGGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR TCA 90 bp AGACAGGCTAAATGCAGATCTCACAGCATTTGCCCTGAGGAGCAGGACAGCGGGCAGCCAACATGTTATTaGGCTCCAATTCTTAACGTA +
Preference number: 2 (lower is better)
Translates to: RQAKCRSHSICPEEQDSGQPTCY*APILNV
Trigger: TACGTTAAGAATTGGAGCTCAATAACATGTTGGCTG...CCCGCTGTCCTGCTCCTCAGGGCAAATGCTGTGAGATCTGCATTTAGCCTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR CCA 90 bp ATATTAGATAACCAGAGCAGTGGGTACCCCAAAATGGTAACAGGGTATGAACTCGGGGAATTAGCAGGCTaGGGGTTGCCCATCAGTGTC +
Preference number: 2 (lower is better)
Translates to: ILDNQSSGYPKMVTGYELGELAG*GLPISV
Trigger: GACACTGATGGGCAACCCCCAGCCTGCTAATTCCCC...GAGTTCATACCCTGTTACCATTTTGGGGTACCCACTGCTCTGGTTATCTAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR CAA 90 bp TCTCTGGGCCCTTTCATTCTCTGCTATGGACTGAGTGGGACCAGCTaGGATCAAAATCCTCAAACCTCATACAACACTGTCAGCAGCTTT +
Preference number: 2 (lower is better)
Translates to: SLGPFILCYGLSGTS*DQNPQTSYNTVSSF
Trigger: AAAGCTGCTGACAGTGTTGTATGAGGTTTGAGGATTTTGATCCAAGCTGGTCCCACTCAGTCCATAGCAGAGAATGAAAGGGCCCAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR TCA 90 bp GCTTTGGCTTTGGCCAACAATGTCAGTGCATTGAGTCCCATAGACAAAAGCAGCAAAATTAGCCAGACATaGTGGTGGGTGCCTGTAGTC +
Preference number: 2 (lower is better)
Translates to: ALALANNVSALSPIDKSSKISQT*WWVPVV
Trigger: GACTACAGGCACCCACCATCATGTCTGGCTAATTTT...GCTGCTTTTGTCTATGGGACTCAATGCACTGACATTGTTGGCCAAAGCCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR GCA 90 bp TTTGGCAGCCAACGTGCAAATCCGAAGCCAGGTTTGAGAAAGTGGTCATCATTTAGGTGCTTGCCTGTCTaGAAAGATCATCAACCACGC +
Preference number: 2 (lower is better)
Translates to: FGSQRANPKPGLRKWSSFRCLPV*KDHQPR
Trigger: GCGTGGTTGATGATCTTTGCAGACAGGCAAGCACCT...AAATGATGACCACTTTCTCAAACCTGGCTTCGGATTTGCACGTTGGCTGCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR GCA 90 bp TTCTTCAGTCTGGATCAGCTCTTCAGTCTGTCTTTCTCTCTTGTGACATTGACAGATTCTGCTTCAGGCTaGTGGCCAGCAGGTGTCTCA +
Preference number: 2 (lower is better)
Translates to: FFSLDQLFSLSFSLVTLTDSASG*WPAGVS
Trigger: TGAGACACCTGCTGGCCAGCAGCCTGAAGCAGAATC...TGTCAATGTCACAAGAGAGAAAGACAGACTGAAGAGCTGATCCAGACTGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR TCA 90 bp ATATTAGATAACCAGAGCAGTGGGTACCCCAAAATGGTAACAGGGTATGAACTCAAAAGCAGCTGCCACTaGAGCCCAGCCTGTTGCAAT +
Preference number: 2 (lower is better)
Translates to: ILDNQSSGYPKMVTGYELKSSCH*SPACCN
Trigger: ATTGCAACAGGCTGGGCTTCAGTGGCAGCTGCTTTT...GAGTTCATACCCTGTTACCATTTTGGGGTACCCACTGCTCTGGTTATCTAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR TCA 90 bp ATTCCACGTGTAGCCCATTCAGACTGGAGATCTGCACACAAGAGGGCAGCTACATATCACTTAGATCTGTaGCACGGAGACAGTAATTTA +
Preference number: 2 (lower is better)
Translates to: IPRVAHSDWRSAHKRAATYHLDL*HGDSNL
Trigger: TAAATTACTGTCTCCGTGTCACAGATCTAAGTGATA...TGTAGCTGCCCTCTTGTGTGCAGATCTCCAGTCTGAATGGGCTACACGTGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR CCA 90 bp ATATTAGATAACCAGAGCAGTGGGTACCCCAAAATGGTAACAGGGTATGAACTCGTTCAAGGTCCAGCGTaGTTAGTGTCCTCAGAGAAC +
Preference number: 2 (lower is better)
Translates to: ILDNQSSGYPKMVTGYELVQGPA*LVSSEN
Trigger: GTTCTCTGAGGACACTAACCACGCTGGACCTTGAAC...GAGTTCATACCCTGTTACCATTTTGGGGTACCCACTGCTCTGGTTATCTAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR CCA 90 bp TTCTTCAGTCTGGATCAGCTCTTCAGTCTGTCTTTCTCTCTTGTGACATTGACATGGCACATGGCACAGTaGATGATCAGAGCACACCTT +
Preference number: 2 (lower is better)
Translates to: FFSLDQLFSLSFSLVTLTWHMAQ*MIRAHL
Trigger: AAGGTGTGCTCTGATCATCCACTGTGCCATGTGCCA...TGTCAATGTCACAAGAGAGAAAGACAGACTGAAGAGCTGATCCAGACTGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CAA 90 bp ATTTGTTCATTTTATGTTATTGAGCACCTATTATACACAGGCGCCTaGCTGGGTACAGAGGGCACAGCAGTGTACAAAGCGAGATGTTTC +
Preference number: 2 (lower is better)
Translates to: ICSFYVIEHLLYTGA*LGTEGTAVYKARCF
Trigger: GAAACATCTCGCTTTGTACACTGCTGTGCCCTCTGTACCCAGCAAGGCGCCTGTGTATAATAGGTGCTCAATAACATAAAATGAACAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR TCA 90 bp TTTGGCAGCCAACGTGCAAATCCGAAGCCAGGTTTGAGAAAGTGGTCATCATTTAATAGCCAAAGTGTGTaGCAAATGAGAATTGAACTG +
Preference number: 2 (lower is better)
Translates to: FGSQRANPKPGLRKWSSFNSQSV*QMRIEL
Trigger: CAGTTCAATTCTCATTTGTCACACACTTTGGCTATT...AAATGATGACCACTTTCTCAAACCTGGCTTCGGATTTGCACGTTGGCTGCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR GCA 90 bp TTTGGCAGCCAACGTGCAAATCCGAAGCCAGGTTTGAGAAAGTGGTCATCATTTAGCTTTTCCTGTATCTaGCTGTTACCTGAACTATTA +
Preference number: 2 (lower is better)
Translates to: FGSQRANPKPGLRKWSSFSFSCI*LLPELL
Trigger: TAATAGTTCAGGTAACAGGCAGATACAGGAAAAGCT...AAATGATGACCACTTTCTCAAACCTGGCTTCGGATTTGCACGTTGGCTGCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR TCA 90 bp ATTAACAAATCGTTAGTGTTAATAACTGCAGGCTCTGACCTCATTTCATCATCAAATGGTAACAGGGTATaGACTCAAACCCTGGACCTG +
Preference number: 2 (lower is better)
Translates to: INKSLVLITAGSDLISSSNGNRV*TQTLDL
Trigger: CAGGTCCAGGGTTTGAGTTCATACCCTGTTACCATT...TGATGATGAAATGAGGTCAGAGCCTGCAGTTATTAACACTAACGATTTGTTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CAA 90 bp TCATCACTTATTGAGCTAATACTTTCTGAGCGCTTTGAATTTCCCTaGCACTGTGATAAGGGCTTTGCATGTATCTGCTCATTAAATAAA +
Preference number: 2 (lower is better)
Translates to: SSLIELILSERFEFP*HCDKGFACICSLNK
Trigger: TTTATTTAATGAGCAGATACATGCAAAGCCCTTATCACAGTGCAAGGGAAATTCAAAGCGCTCAGAAAGTATTAGCTCAATAAGTGATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CAA 90 bp TATCAAGCTAGACTTCCTGGTTCCATTTTCATTGTATTTTTAGCATaGCCTTCTGTGTATGACAAATTCTACTGCTTTGGGTGTTATATG +
Preference number: 2 (lower is better)
Translates to: YQARLPGSIFIVFLA*PSVYDKFYCFGCYM
Trigger: CATATAACACCCAAAGCAGTAGAATTTGTCATACACAGAAGGCAATGCTAAAAATACAATGAAAATGGAACCAGGAAGTCTAGCTTGATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR TCA 72 bp CGCCCCCTGGCGGCCGGAGCCAATCAGCGCGGGCGTTaGGCCGGCCAATTAGCGCGTGCAGGGGGCGGCCTG +
Preference number: 3 (lower is better)
Translates to: RPLAAGANQRGR*AGQLARAGGGL
Trigger: CAGGCCGCCCCCTGCACGCGCTAATTGGCCGGCTCAACGCCCGCGCTGATTGGCTCCGGCCGCCAGGGGGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR TCA 72 bp TCTCCAGGCGCATCTGGCCGGAGGCTGGCTCCTGGTTaGACAGCGCAGGCAGTGGCAGGCAGGGCAGGGTGG +
Preference number: 3 (lower is better)
Translates to: SPGASGRRLAPG*TAQAVAGRAGW
Trigger: CCACCCTGCCCTGCCTGCCACTGCCTGCGCTGTTCAACCAGGAGCCAGCCTCCGGCCAGATGCGCCTGGAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571186.5
3UTR CCA 72 bp GGGTGGACCGCAGCTGCCACCAGGCATCCACCCAACTaGGCGCTAAAGGAGCCTGGAGCCGGGCCTGTGTCT +
Preference number: 3 (lower is better)
Translates to: GWTAAATRHPPN*ALKEPGAGPVS
Trigger: AGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCTGGTGGCAGCTGCGGTCCACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
3UTR TCA 72 bp GGGATGGTGGGCGTCCACATCGCCAGCGTCTCCACATaGGGACACCTCCGAAGGCTGGCAGCGAGCTGCTGG +
Preference number: 3 (lower is better)
Translates to: GMVGVHIASVST*GHLRRLAASCW
Trigger: CCAGCAGCTCGCTGCCAGCCTTCGGAGGTGTCCTCATGTGGAGACGCTGGCGATGTGGACGCCCACCATCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618207.4
3UTR GCA 72 bp CAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTaGCACCAGGCATCCACCCAACTGGGCGCTAAAGGA +
Preference number: 3 (lower is better)
Translates to: QRRPRGSWVDRS*HQASTQLGAKG
Trigger: TCCTTTAGCGCCCAGTTGGGTGGATGCCTGGTGGCAGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
3UTR GCA 72 bp GGGGGCTGCAGAGGGGTTGGGCATGGGAACACGAGGTaGTACAGAGACACTGGCACCCGGCTAGGCACACAG +
Preference number: 3 (lower is better)
Translates to: GGCRGVGHGNTR*YRDTGTRLGTQ
Trigger: CTGTGTGCCTAGCCGGGTGCCAGTGTCTCTGTAGCACCTCGTGTTCCCATGCCCAACCCCTCTGCAGCCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 72 bp GCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTaGACCGCAGCTGCCACCAGGCATCCACCCAACTGG +
Preference number: 3 (lower is better)
Translates to: AMSFREGLGAPG*TAAATRHPPNW
Trigger: CCAGTTGGGTGGATGCCTGGTGGCAGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
3UTR CCA 72 bp GTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTaGGTGGACCGCAGCTGCCACCAGGCATCCACCCAA +
Preference number: 3 (lower is better)
Translates to: VRNVLQRRPRGS*VDRSCHQASTQ
Trigger: TTGGGTGGATGCCTGGTGGCAGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
3UTR CCA 72 bp CTGGTCGGTTTTCTCCAGGCGCATCTGGCCGGAGGCTaGCTCCTGGTTGAACAGCGCAGGCAGTGGCAGGCA +
Preference number: 3 (lower is better)
Translates to: LVGFLQAHLAGG*LLVEQRRQWQA
Trigger: TGCCTGCCACTGCCTGCGCTGTTCAACCAGGAGCCAGCCTCCGGCCAGATGCGCCTGGAGAAAACCGACCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571186.5
3UTR GCA 72 bp GGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTaGCCTGTCAAGGTGTCTGGTCGGAGAGCAGGGTGG +
Preference number: 3 (lower is better)
Translates to: GGCPSVSSECPV*PVKVSGRRAGW
Trigger: CCACCCTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATGGGCAACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR CCA 72 bp CTAGCGCCTGGCTGGGACTGTCGGGGATGCGGTTTGTaGTCACAGGACTGGGAGAGGAGTGAGGTCCTCACC +
Preference number: 3 (lower is better)
Translates to: LAPGWDCRGCGL*SQDWERSEVLT
Trigger: GGTGAGGACCTCACTCCTCTCCCAGTCCTGTGACCACAAACCGCATCCCCGACAGTCCCAGCCAGGCGCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 72 bp GGCATGGGAATCTGGTCGGTTTTCTCCAGGCGCATCTaGCCGGAGGCTGGCTCCTGGTTGAACAGCGCAGGC +
Preference number: 3 (lower is better)
Translates to: GMGIWSVFSRRI*PEAGSWLNSAG
Trigger: GCCTGCGCTGTTCAACCAGGAGCCAGCCTCCGGCCAGATGCGCCTGGAGAAAACCGACCAGATTCCCATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571186.5
3UTR-3UTR CAA 90 bp CGCATCTGGCCGGAGGCTGGCTCCTGGTTGAACAGCGCAGGCAGTGGCAGGCAGCTGGCTGCAGCTGTGTaGATCAGCAACTGCTCTGTG +
Preference number: 3 (lower is better)
Translates to: RIWPEAGSWLNSAGSGRQLAAAV*ISNCSV
Trigger: CACAGAGCAGTTGCTGATCAACACAGCTGCAGCCAG...CTGCCTGCCACTGCCTGCGCTGTTCAACCAGGAGCCAGCCTCCGGCCAGATGCG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571186.5
3UTR TCA 72 bp CAGGTGACACCAGCCCAACCCTCAAGCTGCCCCACCTaGCACAGAGTAGGACAGAAGGAGCTGTCCCCGCTG +
Preference number: 3 (lower is better)
Translates to: QVTPAQPSSCPT*HRVGQKELSPL
Trigger: CAGCGGGGACAGCTCCTTCTGTCCTACTCTGTGTCAGGTGGGGCAGCTTGAGGGTTGGGCTGGTGTCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR TCA 72 bp AACCTGGGGTCACCTCCCTGTCCTCGACTCACTGTGTaGCTTCAGGCAGAGGTCACCACCCTCTCTGGGCCC +
Preference number: 3 (lower is better)
Translates to: NLGSPPCPRLTV*LQAEVTTLSGP
Trigger: GGGCCCAGAGAGGGTGGTGACCTCTGCCTGAAGTCACACAGTGAGTCGAGGACAGGGAGGTGACCCCAGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 72 bp ATTTTTCCGGGCAAGGTGGAAGGTGTTGCCAAGCCCTaGCCACTACCCAGCGCTGGCTCAGCTGGCCCAGAG +
Preference number: 3 (lower is better)
Translates to: IFPGKVEGVAKP*PLPSAGSAGPE
Trigger: CTCTGGGCCAGCTGAGCCAGCGCTGGGTAGTGGGCAGGGCTTGGCAACACCTTCCACCTTGCCCGGAAAAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 72 bp ACAGCCAGACTAGCGCCTGGCTGGGACTGTCGGGGATaGGGTTTGTGGTCACAGGACTGGGAGAGGAGTGAG +
Preference number: 3 (lower is better)
Translates to: TARLAPGWDCRG*GLWSQDWERSE
Trigger: CTCACTCCTCTCCCAGTCCTGTGACCACAAACCGCATCCCCGACAGTCCCAGCCAGGCGCTAGTCTGGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 72 bp CCACGCTGTCCTGATGTTTCCCCCAGTGAGGTGGTCTaGTGGAGGCGTCCCAGGGCGGTAGTGAATACGCAG +
Preference number: 3 (lower is better)
Translates to: PRCPDVSPSEVV*WRRPRAVVNTQ
Trigger: CTGCGTATTCACTACCGCCCTGGGACGCCTCCAGCAGACCACCTCACTGGGGGAAACATCAGGACAGCGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 72 bp GCGGTGATAATTGGTACCCAGCGAGTCCCCAGATGGTaGTGGTGCCCTCACAGCTGCCATCCCAGGCCCCAA +
Preference number: 3 (lower is better)
Translates to: AVIIGTQRVPRW*WCPHSCHPRPQ
Trigger: TTGGGGCCTGGGATGGCAGCTGTGAGGGCACCAGCACCATCTGGGGACTCGCTGGGTACCAATTATCACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 72 bp CACCAGGCATCCACCCAACTGGGCGCTAAAGGAGCCTaGAGCCGGGCCTGTGTCTGTCAGCAGAGCAAGATG +
Preference number: 3 (lower is better)
Translates to: HQASTQLGAKGA*SRACVCQQSKM
Trigger: CATCTTGCTCTGCTGACAGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
3UTR CCA 72 bp GCAGGTCGACCTGCAAGGAAGAGTGAGTGGAGGGAATaGGGCGGGGCACCCACAGCCTCTGCTAAGGTCTCA +
Preference number: 3 (lower is better)
Translates to: AGRPARKSEWRE*GGAPTASAKVS
Trigger: TGAGACCTTAGCAGAGGCTGTGGGTGCCCCGCCCCATTCCCTCCACTCACTCTTCCTTGCAGGTCGACCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 72 bp CACAAGAGGGCAGCTACAGCCAGACTAGCGCCTGGCTaGGACTGTCGGGGATGCGGTTTGTGGTCACAGGAC +
Preference number: 3 (lower is better)
Translates to: HKRAATARLAPG*DCRGCGLWSQD
Trigger: GTCCTGTGACCACAAACCGCATCCCCGACAGTCCCAGCCAGGCGCTAGTCTGGCTGTAGCTGCCCTCTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 72 bp CGCTGTCCTGATGTTTCCCCCAGTGAGGTGGTCTGCTaGAGGCGTCCCAGGGCGGTAGTGAATACGCAGCAG +
Preference number: 3 (lower is better)
Translates to: RCPDVSPSEVVC*RRPRAVVNTQQ
Trigger: CTGCTGCGTATTCACTACCGCCCTGGGACGCCTCCAGCAGACCACCTCACTGGGGGAAACATCAGGACAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 72 bp TGGCGGGGAACTCCCTCAAGGGTAAGGCTTCATTTCTaGGAGTCCCTCCTGGCAAGGGGCTTGGCTGGGTGG +
Preference number: 3 (lower is better)
Translates to: WRGTPSRVRLHF*ESLLARGLAGW
Trigger: CCACCCAGCCAAGCCCCTTGCCAGGAGGGACTCCCAGAAATGAAGCCTTACCCTTGAGGGAGTTCCCCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR CAA 90 bp TGGAGCCGGGCCTGTGTCTGTCAGCAGAGCAAGATGTGGTTCATTCCGCAGCCGCCCTCGTCCCCGATCTaGTTCTCACTCAGCGCATCC +
Preference number: 3 (lower is better)
Translates to: WSRACVCQQSKMWFIPQPPSSPI*FSLSAS
Trigger: GGATGCGCTGAGTGAGAACAAGATCGGGGACGAGGG...CGGCTGCGGAATGAACCACATCTTGCTCTGCTGACAGACACAGGCCCGGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618207.4
3UTR TCA 72 bp AACCACGCAGCCGGGTCTGGATTCCTCAGACCCTCTTaGCACCCAGCTCTCACTTGCTGGGGAGAGGAGCAG +
Preference number: 3 (lower is better)
Translates to: NHAAGSGFLRPS*HPALTCWGEEQ
Trigger: CTGCTCCTCTCCCCAGCAAGTGAGAGCTGGGTGTCAAGAGGGTCTGAGGAATCCAGACCCGGCTGCGTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 72 bp GGTTGGGCATGGGAACACGAGGTGCTACAGAGACACTaGCACCCGGCTAGGCACACAGAGAAGGCAGTGGGA +
Preference number: 3 (lower is better)
Translates to: GWAWEHEVLQRH*HPARHTEKAVG
Trigger: TCCCACTGCCTTCTCTGTGTGCCTAGCCGGGTGCCAGTGTCTCTGTAGCACCTCGTGTTCCCATGCCCAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 72 bp TGCACACAAGAGGGCAGCTACAGCCAGACTAGCGCCTaGCTGGGACTGTCGGGGATGCGGTTTGTGGTCACA +
Preference number: 3 (lower is better)
Translates to: CTQEGSYSQTSA*LGLSGMRFVVT
Trigger: TGTGACCACAAACCGCATCCCCGACAGTCCCAGCCAGGCGCTAGTCTGGCTGTAGCTGCCCTCTTGTGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 72 bp CCCTCACAGCTGCCATCCCAGGCCCCAAGCTTGGAGTaGCGGGGAACTCCCTCAAGGGTAAGGCTTCATTTC +
Preference number: 3 (lower is better)
Translates to: PSQLPSQAPSLE*RGTPSRVRLHF
Trigger: GAAATGAAGCCTTACCCTTGAGGGAGTTCCCCGCCACTCCAAGCTTGGGGCCTGGGATGGCAGCTGTGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR CAA 90 bp AGAGGGAGGAATTCCCAGGCCGGATACACACCCCTCCCTCAGGCTTCTCCTCCGCGCTCCCAAATCCATTaGAGGCAGAGCTGTCAGCTC +
Preference number: 3 (lower is better)
Translates to: RGRNSQAGYTPLPQASPPRSQIH*RQSCQL
Trigger: GAGCTGACAGCTCTGCCTCAAATGGATTTGGGAGCG...CGGAGGAGAAGCCTGAGGGAGGGGTGTGTATCCGGCCTGGGAATTCCTCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR TCA 72 bp GAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCTTCTaGGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCG +
Preference number: 3 (lower is better)
Translates to: ELAGWGLPISVF*VPGVPCQGVWS
Trigger: CGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCTGCTAATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR GCA 72 bp CTGGTTTGCAGCCCCCATGTTCCCCCTTGTCCCAGGTaGCTTTGTGCAGTGTACAGACTGGCCAACCTCACC +
Preference number: 3 (lower is better)
Translates to: LVCSPHVPPCPR*LCAVYRLANLT
Trigger: GGTGAGGTTGGCCAGTCTGTACACTGCACAAAGGCACCTGGGACAAGGGGGAACATGGGGGCTGCAAACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 72 bp ACAAACAGCAGAAGATCCAGTGGGGTTGAGAGAGTCTaGCCCAGTCGGGCTGGCGTGAAAGTCCCAGGCTGG +
Preference number: 3 (lower is better)
Translates to: TNSRRSSGVERV*PSRAGVKVPGW
Trigger: CCAGCCTGGGACTTTCACGCCAGCCCGACTGGGGCAGACTCTCTCAACCCCACTGGATCTTCTGCTGTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 72 bp GTTGCAAAGCATTTTTCCGGGCAAGGTGGAAGGTGTTaGCAAGCCCTGCCCACTACCCAGCGCTGGCTCAGC +
Preference number: 3 (lower is better)
Translates to: VAKHFSGQGGRC*QALPTTQRWLS
Trigger: GCTGAGCCAGCGCTGGGTAGTGGGCAGGGCTTGGCAACACCTTCCACCTTGCCCGGAAAAATGCTTTGCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 72 bp AGGAGAAACGGAGTCCCAAAGAGGCATGCAGCAAGGTaGAGCGGTAGCCCGGGTTTCCTTCGGCTTTTGCGG +
Preference number: 3 (lower is better)
Translates to: RRNGVPKRHAAR*SGSPGFLRLLR
Trigger: CCGCAAAAGCCGAAGGAAACCCGGGCTACCGCTGCACCTTGCTGCATGCCTCTTTGGGACTCCGTTTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR-3UTR CAA 90 bp GTCAGGCACTCCATGGACACAAACAGCCCAATGTGGTGGGCACTGTCCCCTTTTAGAACCCAGACTGGTTaGCAGCCCCCATGTTCCCCC +
Preference number: 3 (lower is better)
Translates to: VRHSMDTNSPMWWALSPFRTQTG*QPPCSP
Trigger: GGGGGAACATGGGGGCTGCAAACCAGTCTGGGTTCT...AAAAGGGGACAGTGCCCACCACATTGGGCTGTTTGTGTCCATGGAGTGCCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR TCA 72 bp TCATGCCCTGATTCCTCCGAGCAGCGCTTTACCACCTaGCAAATGGGGTTCAGGGGCACTTCCGGCACACTG +
Preference number: 3 (lower is better)
Translates to: SCPDSSEQRFTT*QMGFRGTSGTL
Trigger: CAGTGTGCCGGAAGTGCCCCTGAACCCCATTTGTCAGGTGGTAAAGCGCTGCTCGGAGGAATCAGGGCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR TCA 72 bp TGCTTGTCATCTTCTCAGCCCTGGCTGCAGCTGTGTTaGTCAGCAACTGCTCTGTGCCAGGCAGTCCCCCAG +
Preference number: 3 (lower is better)
Translates to: CLSSSQPWLQLC*SATALCQAVPQ
Trigger: CTGGGGGACTGCCTGGCACAGAGCAGTTGCTGATCAACACAGCTGCAGCCAGGGCTGAGAAGATGACAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571186.5
3UTR GCA 72 bp GGTGGAGGGCAGCTATGGAGAGACATTAGCTCTGCCTaGACTTACAGCCTGAGGACCAAGCAGGCTCTGGAG +
Preference number: 3 (lower is better)
Translates to: GGGQLWRDISSA*TYSLRTKQALE
Trigger: CTCCAGAGCCTGCTTGGTCCTCAGGCTGTAAGTGCAGGCAGAGCTAATGTCTCTCCATAGCTGCCCTCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 72 bp CCCCTTGTCCCAGGTGCCTTTGTGCAGTGTACAGACTaGCCAACCTCACCTGGCAGCCCTGTCCAAAGAGTT +
Preference number: 3 (lower is better)
Translates to: PLVPGAFVQCTD*PTSPGSPVQRV
Trigger: AACTCTTTGGACAGGGCTGCCAGGTGAGGTTGGCCAGTCTGTACACTGCACAAAGGCACCTGGGACAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 72 bp GTCCCAGAACATCCTCCCGCCCTACACATAGAAACCTaGGGTCACCTCCCTGTCCTCGACTCACTGTGTGAC +
Preference number: 3 (lower is better)
Translates to: VPEHPPALHIET*GHLPVLDSLCD
Trigger: GTCACACAGTGAGTCGAGGACAGGGAGGTGACCCCAGGTTTCTATGTGTAGGGCGGGAGGATGTTCTGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 72 bp TTCTGGGACAGATTGAGGGTTTCCAAGGACTTCAGCTaGGGGAAGGTGGCTGAGAGCTGCGAGACACCCTCG +
Preference number: 3 (lower is better)
Translates to: FWDRLRVSKDFS*GKVAESCETPS
Trigger: CGAGGGTGTCTCGCAGCTCTCAGCCACCTTCCCCCAGCTGAAGTCCTTGGAAACCCTCAATCTGTCCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618207.4
3UTR TCA 72 bp GCCAGGGACAGCATTTGGGGTGTGGTGGGAAAAGCCTaGAGGCCAAGCTGGAAACCAGGCCTGAATCCCATA +
Preference number: 3 (lower is better)
Translates to: ARDSIWGVVGKA*RPSWKPGLNPI
Trigger: TATGGGATTCAGGCCTGGTTTCCAGCTTGGCCTTCAGGCTTTTCCCACCACACCCCAAATGCTGTCCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 72 bp TTGCAGCCAGTTCGAGGCAGGAGGTGCTTGCCTGTCTaGAAAGATCATCAACCACGCAGCCGGGTCTGGATT +
Preference number: 3 (lower is better)
Translates to: LQPVRGRRCLPV*KDHQPRSRVWI
Trigger: AATCCAGACCCGGCTGCGTGGTTGATGATCTTTGCAGACAGGCAAGCACCTCCTGCCTCGAACTGGCTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 72 bp TGCTTTCAGAAGGCCCCTAGCCTTGAGAAGGTTCCCTaGCGGTATTGGTTTCTACCTGGGAACAGGTGGGGC +
Preference number: 3 (lower is better)
Translates to: CFQKAPSLEKVP*RYWFLPGNRWG
Trigger: GCCCCACCTGTTCCCAGGTAGAAACCAATACCGGCAGGGAACCTTCTCAAGGCTAGGGGCCTTCTGAAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 72 bp CCTGTCTGCAAAGATCATCAACCACGCAGCCGGGTCTaGATTCCTCAGACCCTCTTGACACCCAGCTCTCAC +
Preference number: 3 (lower is better)
Translates to: PVCKDHQPRSRV*IPQTLLTPSSH
Trigger: GTGAGAGCTGGGTGTCAAGAGGGTCTGAGGAATCCAGACCCGGCTGCGTGGTTGATGATCTTTGCAGACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 72 bp CTTCCTGTAGGTTGCAAAGCATTTTTCCGGGCAAGGTaGAAGGTGTTGCCAAGCCCTGCCCACTACCCAGCG +
Preference number: 3 (lower is better)
Translates to: LPVGCKAFFRAR*KVLPSPAHYPA
Trigger: CGCTGGGTAGTGGGCAGGGCTTGGCAACACCTTCCACCTTGCCCGGAAAAATGCTTTGCAACCTACAGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 72 bp AGGCTGATCCGTGAATCCTGTTGTTGCAGGTGTTCCTaGACACTGAATGGGATGGTGGGCGTCCACATCGCC +
Preference number: 3 (lower is better)
Translates to: RLIRESCCCRCS*TLNGMVGVHIA
Trigger: GGCGATGTGGACGCCCACCATCCCATTCAGTGTCCAGGAACACCTGCAACAACAGGATTCACGGATCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618207.4
3UTR-3UTR CAA 90 bp CTTTCAGAGCCTCACCCACCAGTGCGCGTAAAACGCCAGGGCCATCTTCTTACTGGGCTGCTGAGTAACTaGGCTGTGGCTATTGCCTTC +
Preference number: 3 (lower is better)
Translates to: LSEPHPPVRVKRQGHLLTGLLSN*AVAIAF
Trigger: GAAGGCAATAGCCACAGCCAAGTTACTCAGCAGCCC...AGTAAGAAGATGGCCCTGGCGTTTTACGCGCACTGGTGGGTGAGGCTCTGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR TCA 72 bp TTCAAACGATTGACCCCTTTCTACAGGCGAGGAGACTaGGGTGTGGGAGAGTACAGGCGGCAGAACTCTGGG +
Preference number: 3 (lower is better)
Translates to: FKRLTPFYRRGD*GVGEYRRQNSG
Trigger: CCCAGAGTTCTGCCGCCTGTACTCTCCCACACCTCAGTCTCCTCGCCTGTAGAAAGGGGTCAATCGTTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR TCA 72 bp GCTTCACGAAGGGGATCTAGCACCCAACTGTCATTCTaGCTACAGAAACCAGCCAGCCAGCCACGTCCTCTG +
Preference number: 3 (lower is better)
Translates to: ASRRGSSTQLSF*LQKPASQPRPL
Trigger: CAGAGGACGTGGCTGGCTGGCTGGTTTCTGTAGTCAGAATGACAGTTGGGTGCTAGATCCCCTTCGTGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 72 bp GTAGTGGCACTGAGGCCCCCAGCCAACAGCCAGCATTaGCTGTCAGACGTACAGAAGAATGAGTCTTCAGGT +
Preference number: 3 (lower is better)
Translates to: VVALRPPANSQH*LSDVQKNESSG
Trigger: ACCTGAAGACTCATTCTTCTGTACGTCTGACAGGCAATGCTGGCTGTTGGCTGGGGGCCTCAGTGCCACTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 72 bp CCCATTAGCTGTTTCCCTGCTAAGGGCTGGTGCATCTaGCCAGGCCTAGCTTTGGCTTTGGCCAACAATGTC +
Preference number: 3 (lower is better)
Translates to: PISCFPAKGWCI*PGLALALANNV
Trigger: GACATTGTTGGCCAAAGCCAAAGCTAGGCCTGGCCAGATGCACCAGCCCTTAGCAGGGAAACAGCTAATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR CCA 72 bp ATGTCTCGTGTGTGCTGGGTATTGTCAGGCACTCCATaGACACAAACAGCCCAATGTGGTGGGCACTGTCCC +
Preference number: 3 (lower is better)
Translates to: MSRVCWVLSGTP*TQTAQCGGHCP
Trigger: GGGACAGTGCCCACCACATTGGGCTGTTTGTGTCCATGGAGTGCCTGACAATACCCAGCACACACGAGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 72 bp CCAGGCATCTTCACAAAGCCCGCTGCTGATCAGCTTTaGCAGCCAACGTGCAAATCCGAAGCCAGGTTTGAG +
Preference number: 3 (lower is better)
Translates to: PGIFTKPAADQL*QPTCKSEARFE
Trigger: CTCAAACCTGGCTTCGGATTTGCACGTTGGCTGCCAAAGCTGATCAGCAGCGGGCTTTGTGAAGATGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR CAA 90 bp TCCTTAACTCTAGGATGCAGGTTCCGTAGTGGGCGGACCTTCCAGCAACCAGAGCAGAGCGAATTCGATTaGAGATCTGAGGGCAGACCC +
Preference number: 3 (lower is better)
Translates to: SLTLGCRFRSGRTFQQPEQSEFD*RSEGRP
Trigger: GGGTCTGCCCTCAGATCTCAAATCGAATTCGCTCTG...CTCTGGTTGCTGGAAGGTCCGCCCACTACGGAACCTGCATCCTAGAGTTAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR GCA 72 bp GTAAATTCCACGTGTAGCCCATTCAGACTGGAGATCTaGACACAAGAGGGCAGCTACAGCCAGACTAGCGCC +
Preference number: 3 (lower is better)
Translates to: VNSTCSPFRLEI*TQEGSYSQTSA
Trigger: GGCGCTAGTCTGGCTGTAGCTGCCCTCTTGTGTGCAGATCTCCAGTCTGAATGGGCTACACGTGGAATTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 72 bp TGTGCTCTGATGATGTCAGAAGGTTGGAGAACCTGCTaGCCTGGGTTCTATAAGCTCCAGCTCTGGGGTGCT +
Preference number: 3 (lower is better)
Translates to: CALMMSEGWRTC*PGFYKLQLWGA
Trigger: AGCACCCCAGAGCTGGAGCTTATAGAACCCAGGGCAGCAGGTTCTCCAACCTTCTGACATCATCAGAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 72 bp TGCTGTGCTCTGATGATGTCAGAAGGTTGGAGAACCTaGTGCCCTGGGTTCTATAAGCTCCAGCTCTGGGGT +
Preference number: 3 (lower is better)
Translates to: CCALMMSEGWRT*CPGFYKLQLWG
Trigger: ACCCCAGAGCTGGAGCTTATAGAACCCAGGGCAGCAGGTTCTCCAACCTTCTGACATCATCAGAGCACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 72 bp TGGGATCATCTCAGGCTGATCCGTGAATCCTGTTGTTaGAGGTGTTCCTGGACACTGAATGGGATGGTGGGC +
Preference number: 3 (lower is better)
Translates to: WDHLRLIRESCC*RCSWTLNGMVG
Trigger: GCCCACCATCCCATTCAGTGTCCAGGAACACCTGCAACAACAGGATTCACGGATCAGCCTGAGATGATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618207.4
3UTR CCA 72 bp AGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTaGTTAGTGTCCTCAGAGAACATGCCTGTCCAGAGC +
Preference number: 3 (lower is better)
Translates to: SCVHKYPVQGPA*LVSSENMPVQS
Trigger: GCTCTGGACAGGCATGTTCTCTGAGGACACTAACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
3UTR CCA 72 bp CCTCTCAGAAAAGAGGACTTGAGCCAAGGTGGGCTCTaGTGTGTGCACGCGTGTGTGTGTATGTGTGTGTAC +
Preference number: 3 (lower is better)
Translates to: PLRKEDLSQGGL*CVHACVCMCVY
Trigger: GTACACACACATACACACACACGCGTGCACACACCAGAGCCCACCTTGGCTCAAGTCCTCTTTTCTGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 72 bp GTCCCTCAGGGAGATTCAGGCAGCTCAACGAGGAACTaGAGAAAGGCATGGGAATCTGGTCGGTTTTCTCCA +
Preference number: 3 (lower is better)
Translates to: VPQGDSGSSTRN*RKAWESGRFSP
Trigger: TGGAGAAAACCGACCAGATTCCCATGCCTTTCTCCAGTTCCTCGTTGAGCTGCCTGAATCTCCCTGAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571186.5
3UTR TCA 72 bp ATCCCTTGCAGGGTGACACCTGAGCTATTTACAAGCTaGACCTGGATGGCAGCACCTGATACCCTTTGCAGC +
Preference number: 3 (lower is better)
Translates to: IPCRVTPELFTS*TWMAAPDTLCS
Trigger: GCTGCAAAGGGTATCAGGTGCTGCCATCCAGGTTCAGCTTGTAAATAGCTCAGGTGTCACCCTGCAAGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR TCA 72 bp CACCCTATCCACACAAATCTGAGATGGGCTCAAGGATaGCCACAGGCCTTGGAGATCTCTGCAGTGAGCATC +
Preference number: 3 (lower is better)
Translates to: HPIHTNLRWAQG*PQALEISAVSI
Trigger: GATGCTCACTGCAGAGATCTCCAAGGCCTGTGGTCATCCTTGAGCCCATCTCAGATTTGTGTGGATAGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR TCA 72 bp TCCAGAGCACAGCTGGGATCATCTCAGGCTGATCCGTaGATCCTGTTGTTGCAGGTGTTCCTGGACACTGAA +
Preference number: 3 (lower is better)
Translates to: SRAQLGSSQADP*ILLLQVFLDTE
Trigger: TTCAGTGTCCAGGAACACCTGCAACAACAGGATTCACGGATCAGCCTGAGATGATCCCAGCTGTGCTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618207.4
3UTR TCA 72 bp ACCTCCCCCTATTCGATACGCAGAGCGAATTCGATTTaGGATCTGAGGGCAGACCCGAACCAGGAAAGCAAC +
Preference number: 3 (lower is better)
Translates to: TSPYSIRRANSI*DLRADPNQESN
Trigger: GTTGCTTTCCTGGTTCGGGTCTGCCCTCAGATCTCAAATCGAATTCGCTCTGCGTATCGAATAGGGGGAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR GCA 72 bp CTAAGATGTCTTGAATTGGGGCTTCTGAGCAGACTATaGCCGAGTGAAAAGCAACAGTCGTGCCGGCAGCTC +
Preference number: 3 (lower is better)
Translates to: LRCLELGLLSRL*PSEKQQSCRQL
Trigger: GAGCTGCCGGCACGACTGTTGCTTTTCACTCGGGCATAGTCTGCTCAGAAGCCCCAATTCAAGACATCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 72 bp CAGAGGTCACCACCCTCTCTGGGCCCTTTCATTCTCTaGTATGGACTGAGTGGGACCAGCTTGGATCAAAAT +
Preference number: 3 (lower is better)
Translates to: QRSPPSLGPFIL*YGLSGTSLDQN
Trigger: ATTTTGATCCAAGCTGGTCCCACTCAGTCCATAGCAGAGAATGAAAGGGCCCAGAGAGGGTGGTGACCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 72 bp ACAAAGCCCGCTGCTGATCAGCTTTGGCAGCCAACGTaGAAATCCGAAGCCAGGTTTGAGAAAGTGGTCATC +
Preference number: 3 (lower is better)
Translates to: TKPAADQLWQPT*KSEARFEKVVI
Trigger: GATGACCACTTTCTCAAACCTGGCTTCGGATTTGCACGTTGGCTGCCAAAGCTGATCAGCAGCGGGCTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 72 bp CAAGGTGCAGCGGTAGCCCGGGTTTCCTTCGGCTTTTaGGGCCTTAGCATTATGTCTAGGTTTGAACTGTGT +
Preference number: 3 (lower is better)
Translates to: QGAAVARVSFGF*GLSIMSRFELC
Trigger: ACACAGTTCAAACCTAGACATAATGCTAAGGCCGCAAAAGCCGAAGGAAACCCGGGCTACCGCTGCACCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR CCA 72 bp GAAAAGTCCTCTCAGAAAAGAGGACTTGAGCCAAGGTaGGCTCTGGTGTGTGCACGCGTGTGTGTGTATGTG +
Preference number: 3 (lower is better)
Translates to: EKSSQKRGLEPR*ALVCARVCVYV
Trigger: CACATACACACACACGCGTGCACACACCAGAGCCCACCTTGGCTCAAGTCCTCTTTTCTGAGAGGACTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 72 bp CAGTGGGTCAGACCAAAAACCTGGCACATGGCACAGTaGATGATCAGAGCACACCTTAGTGCTCACTCCTGT +
Preference number: 3 (lower is better)
Translates to: QWVRPKTWHMAQ*MIRAHLSAHSC
Trigger: ACAGGAGTGAGCACTAAGGTGTGCTCTGATCATCCACTGTGCCATGTGCCAGGTTTTTGGTCTGACCCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 72 bp ACAGCAGTGTACAAAGCGAGATGTTTCCCGCCCTCCTaGAGCTCATGTCCTAGGACAAGAGCAGACTGCATA +
Preference number: 3 (lower is better)
Translates to: TAVYKARCFPPS*SSCPRTRADCI
Trigger: TATGCAGTCTGCTCTTGTCCTAGGACATGAGCTCCAGGAGGGCGGGAAACATCTCGCTTTGTACACTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 72 bp TATGCAGAGAGAGGCCTGCGAGGAAGAGTGACCATTTaGAAGGTGCGTGGACTTACAATCCACTGGACATGG +
Preference number: 3 (lower is better)
Translates to: YAERGLRGRVTI*KVRGLTIHWTW
Trigger: CCATGTCCAGTGGATTGTAAGTCCACGCACCTTCCAAATGGTCACTCTTCCTCGCAGGCCTCTCTCTGCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 72 bp GTCACCACCCTCTCTGGGCCCTTTCATTCTCTGCTATaGACTGAGTGGGACCAGCTTGGATCAAAATCCTCA +
Preference number: 3 (lower is better)
Translates to: VTTLSGPFHSLL*TEWDQLGSKSS
Trigger: TGAGGATTTTGATCCAAGCTGGTCCCACTCAGTCCATAGCAGAGAATGAAAGGGCCCAGAGAGGGTGGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 72 bp AGTGTCCTCAGAGAACATGCCTGTCCAGAGCACAGCTaGGATCATCTCAGGCTGATCCGTGAATCCTGTTGT +
Preference number: 3 (lower is better)
Translates to: SVLREHACPEHS*DHLRLIRESCC
Trigger: ACAACAGGATTCACGGATCAGCCTGAGATGATCCCAGCTGTGCTCTGGACAGGCATGTTCTCTGAGGACACT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618207.4
3UTR-3UTR CAA 90 bp GACGTGGTCAGTGTCAATGGCGTGTCAGACCCTGAAGGGGCTCTAGCCCAGGAAAACAATGTCAGTGCATaGAGTCCCATAGACAAAAGC +
Preference number: 3 (lower is better)
Translates to: DVVSVNGVSDPEGALAQENNVSA*SPIDKS
Trigger: GCTTTTGTCTATGGGACTCAATGCACTGACATTGTT...TTCCTGGGCTAGAGCCCCTTCAGGGTCTGACACGCCATTGACACTGACCACGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR CAA 90 bp TGTCTGGTCGGAGAGCAGGGTGGAGAAGTACTTTCTCTGTGGCCCGGTGCAGTGAACAATGTCAGTGCATaGAGTCCCATAGACAAAAGC +
Preference number: 3 (lower is better)
Translates to: CLVGEQGGEVLSLWPGAVNNVSA*SPIDKS
Trigger: GCTTTTGTCTATGGGACTCAATGCACTGACATTGTT...CACTGCACCGGGCCACAGAGAAAGTACTTCTCCACCCTGCTCTCCGACCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR-3UTR CAA 90 bp CTTTCAGAGCCTCACCCACCAGTGCGCGTAAAACGCCAGGGCCATCTTCTTACTCCACTGGACATGGAATaGCACTATCATGCCCTGATT +
Preference number: 3 (lower is better)
Translates to: LSEPHPPVRVKRQGHLLTPLDME*HYHALI
Trigger: AATCAGGGCATGATAGTGCAATTCCATGTCCAGTGG...AGTAAGAAGATGGCCCTGGCGTTTTACGCGCACTGGTGGGTGAGGCTCTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR CAA 90 bp CATCTCAGGCTGATCCGTGAATCCTGTTGTTGCAGGTGTTCCTGGACACTGAATCCCAGGTCAGTGATGTaGTTCTGGGACAGATTGAGG +
Preference number: 3 (lower is better)
Translates to: HLRLIRESCCCRCSWTLNPRSVM*FWDRLR
Trigger: CCTCAATCTGTCCCAGAACAACATCACTGACCTGGG...ATTCAGTGTCCAGGAACACCTGCAACAACAGGATTCACGGATCAGCCTGAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618207.4
3UTR TCA 72 bp GTGATGGGGTTGGAGAATGGGGCAAGTCCCGAAGGATaGGAAATCAGCCATATGGAGAGCTGGGAAGAACAT +
Preference number: 3 (lower is better)
Translates to: VMGLENGASPEG*EISHMESWEEH
Trigger: ATGTTCTTCCCAGCTCTCCATATGGCTGATTTCTCATCCTTCGGGACTTGCCCCATTCTCCAACCCCATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR TCA 72 bp CCGCCAAGGAGGGTTCCATTAGACCAGGGAGGAAACTaGGGCTTGCAGAAGTTCGATGACTCATCTCAGATA +
Preference number: 3 (lower is better)
Translates to: PPRRVPLDQGGN*GLQKFDDSSQI
Trigger: TATCTGAGATGAGTCATCGAACTTCTGCAAGCCTCAGTTTCCTCCCTGGTCTAATGGAACCCTCCTTGGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR TCA 72 bp GTCCCCTTTCTGGCGATGTTAACTTTGATCAGTTGGTaGAGGTGGTGTCTGCCAGGTCTCTCCACTGTCAAG +
Preference number: 3 (lower is better)
Translates to: VPFLAMLTLISW*RWCLPGLSTVK
Trigger: CTTGACAGTGGAGAGACCTGGCAGACACCACCTTCACCAACTGATCAAAGTTAACATCGCCAGAAAGGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000646979.1
3UTR TCA 72 bp CCTATTCGATACGCAGAGCGAATTCGATTTGAGATCTaGGGGCAGACCCGAACCAGGAAAGCAACTCAGACG +
Preference number: 3 (lower is better)
Translates to: PIRYAERIRFEI*GQTRTRKATQT
Trigger: CGTCTGAGTTGCTTTCCTGGTTCGGGTCTGCCCTCAGATCTCAAATCGAATTCGCTCTGCGTATCGAATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR CCA 72 bp ACACCCCCTGAGCACCTACTGCTTTGCCCTTTTAACTaGCACAAGGCTCAGTTATACAGGCCAAGGGTATCA +
Preference number: 3 (lower is better)
Translates to: TPPEHLLLCPFN*HKAQLYRPRVS
Trigger: TGATACCCTTGGCCTGTATAACTGAGCCTTGTGCCAGTTAAAAGGGCAAAGCAGTAGGTGCTCAGGGGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 72 bp CAGTCCTCATCCTGGCTTGATGATGACCTTGGCTTTTaGGGGATTCTCGCTTGTCATGCTTTGCAGTTGGAC +
Preference number: 3 (lower is better)
Translates to: QSSSWLDDDLGF*GILACHALQLD
Trigger: GTCCAACTGCAAAGCATGACAAGCGAGAATCCCCCAAAAGCCAAGGTCATCATCAAGCCAGGATGAGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR CCA 72 bp AGCAACCAGAGTTTGGAGAAGCGAAGGGGACACTGGTaGATCTCCACCATGAAAATTGGCGCTTTGGGAATG +
Preference number: 3 (lower is better)
Translates to: SNQSLEKRRGHW*ISTMKIGALGM
Trigger: CATTCCCAAAGCGCCAATTTTCATGGTGGAGATCCACCAGTGTCCCCTTCGCTTCTCCAAACTCTGGTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR-3UTR CAA 90 bp TTTGGCAGCCAACGTGCAAATCCGAAGCCAGGTTTGAGAAAGTGGTCATCATTTAGGCGGGCAGATCACTaGAGGTTAGGAGTTCGAGAC +
Preference number: 3 (lower is better)
Translates to: FGSQRANPKPGLRKWSSFRRADH*RLGVRD
Trigger: GTCTCGAACTCCTAACCTCAAGTGATCTGCCCGCCT...AAATGATGACCACTTTCTCAAACCTGGCTTCGGATTTGCACGTTGGCTGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR CAA 90 bp CCTAGCTTTGGCTTTGGCCAACAATGTCAGTGCATTGAGTCCCATAGACAAAAGGCAGCCGTGAACTTGTaGTACTGGACGTCCATCACC +
Preference number: 3 (lower is better)
Translates to: PSFGFGQQCQCIESHRQKAAVNL*YWTSIT
Trigger: GGTGATGGACGTCCAGTACAACAAGTTCACGGCTGC...CTTTTGTCTATGGGACTCAATGCACTGACATTGTTGGCCAAAGCCAAAGCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618207.4
3UTR TCA 72 bp CCAGAGCAGTGGGTACCCCAAAATGGTAACAGGGTATaGACTCAAACCCTGGACCTGCCTGTGACATTAAAG +
Preference number: 3 (lower is better)
Translates to: PEQWVPQNGNRV*TQTLDLPVTLK
Trigger: CTTTAATGTCACAGGCAGGTCCAGGGTTTGAGTTCATACCCTGTTACCATTTTGGGGTACCCACTGCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR TCA 72 bp GAAGCCAGGTTTGAGAAAGTGGTCATCATTTCTCTGTaGCGTTGGCTTTCCTCAGGGACATGGACCTGTGCA +
Preference number: 3 (lower is better)
Translates to: EARFEKVVIISL*RWLSSGTWTCA
Trigger: TGCACAGGTCCATGTCCCTGAGGAAAGCCAACGTCACAGAGAAATGATGACCACTTTCTCAAACCTGGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR TCA 72 bp GCTTTGGCAGCCAACGTGCAAATCCGAAGCCAGGTTTaGGAAAGTGGTCATCATTTCTCTGTGACGTTGGCT +
Preference number: 3 (lower is better)
Translates to: ALAANVQIRSQV*ESGHHFSVTLA
Trigger: AGCCAACGTCACAGAGAAATGATGACCACTTTCTCAAACCTGGCTTCGGATTTGCACGTTGGCTGCCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 72 bp GGCAGGAATATTGCAGAAGTGAGTGTGTGTCTTCAGTaGATCTTATCGAGAGGCACATGCCATCTGTCCCCT +
Preference number: 3 (lower is better)
Translates to: GRNIAEVSVCLQ*ILSRGTCHLSP
Trigger: AGGGGACAGATGGCATGTGCCTCTCGATAAGATGCACTGAAGACACACACTCACTTCTGCAATATTCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000646979.1
3UTR CCA 72 bp AGGCCTGCGAGGAAGAGTGACCATTTGGAAGGTGCGTaGACTTACAATCCACTGGACATGGAATTGCACTAT +
Preference number: 3 (lower is better)
Translates to: RPARKSDHLEGA*TYNPLDMELHY
Trigger: ATAGTGCAATTCCATGTCCAGTGGATTGTAAGTCCACGCACCTTCCAAATGGTCACTCTTCCTCGCAGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 72 bp TTGAGATTCGGGAAAGGAGTTCTAGGCAGAACCTTGTaGCTGACAAACAGCAGAAGATCCAGTGGGGTTGAG +
Preference number: 3 (lower is better)
Translates to: LRFGKGVLGRTL*LTNSRRSSGVE
Trigger: CTCAACCCCACTGGATCTTCTGCTGTTTGTCAGCCACAAGGTTCTGCCTAGAACTCCTTTCCCGAATCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR CAA 90 bp AACCAGAGCAGTGGGTACCCCAAAATGGTAACAGGGTATGAACTCAAACCCTGGTCGCAGATGCAGTTATaGTACAAGCTTAGCCTGAGC +
Preference number: 3 (lower is better)
Translates to: NQSSGYPKMVTGYELKPWSQMQL*YKLSLS
Trigger: GCTCAGGCTAAGCTTGTACAATAACTGCATCTGCGA...CCAGGGTTTGAGTTCATACCCTGTTACCATTTTGGGGTACCCACTGCTCTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618207.4
3UTR TCA 72 bp ACAATCCACTGGACATGGAATTGCACTATCATGCCCTaGTTCCTCCGAGCAGCGCTTTACCACCTGACAAAT +
Preference number: 3 (lower is better)
Translates to: TIHWTWNCTIMP*FLRAALYHLTN
Trigger: ATTTGTCAGGTGGTAAAGCGCTGCTCGGAGGAATCAGGGCATGATAGTGCAATTCCATGTCCAGTGGATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR TCA 72 bp GATTCCATGTTCTCTAACACCCTATCCACACAAATCTaGGATGGGCTCAAGGATGACCACAGGCCTTGGAGA +
Preference number: 3 (lower is better)
Translates to: DSMFSNTLSTQI*DGLKDDHRPWR
Trigger: TCTCCAAGGCCTGTGGTCATCCTTGAGCCCATCTCAGATTTGTGTGGATAGGGTGTTAGAGAACATGGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR TCA 72 bp TGGAGAAGCGAAGGGGACACTGGTGGATCTCCACCATaGAAATTGGCGCTTTGGGAATGTCCAAAATTTCCA +
Preference number: 3 (lower is better)
Translates to: WRSEGDTGGSPP*KLALWECPKFP
Trigger: TGGAAATTTTGGACATTCCCAAAGCGCCAATTTTCATGGTGGAGATCCACCAGTGTCCCCTTCGCTTCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR CCA 72 bp ATGTTATTGAGCACCTATTATACACAGGCGCCTTGCTaGGTACAGAGGGCACAGCAGTGTACAAAGCGAGAT +
Preference number: 3 (lower is better)
Translates to: MLLSTYYTQAPC*VQRAQQCTKRD
Trigger: ATCTCGCTTTGTACACTGCTGTGCCCTCTGTACCCAGCAAGGCGCCTGTGTATAATAGGTGCTCAATAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 72 bp CTCAGTTTCTTATCCTATACGATGCATGGGTCTCAATaGAAACAGTTCCGCCCCCTTAGGTCGACCTTGGAA +
Preference number: 3 (lower is better)
Translates to: LSFLSYTMHGSQ*KQFRPLRSTLE
Trigger: TTCCAAGGTCGACCTAAGGGGGCGGAACTGTTTCCATTGAGACCCATGCATCGTATAGGATAAGAAACTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 72 bp GAGCTCCATGTGAAATGCAGGGATGATGGTCCTACTTaGCCCTACCTCCTAGAGTTGTTTTTGAGGGATAAG +
Preference number: 3 (lower is better)
Translates to: ELHVKCRDDGPT*PYLLELFLRDK
Trigger: CTTATCCCTCAAAAACAACTCTAGGAGGTAGGGCCAAGTAGGACCATCATCCCTGCATTTCACATGGAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR-3UTR CAA 90 bp CCCCAAATGTCAATAGCACCCTGTCAAACAACAATACATGTCACATGTTTAACAGCAAGGTGGAAGGTGTaGCCAAGCCCTGCCCACTAC +
Preference number: 3 (lower is better)
Translates to: PQMSIAPCQTTIHVTCLTARWKV*PSPAHY
Trigger: GTAGTGGGCAGGGCTTGGCAACACCTTCCACCTTGC...TGTTAAACATGTGACATGTATTGTTGTTTGACAGGGTGCTATTGACATTTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR GCA 72 bp TCCTCAGCGTCTGCTAAGAGCTCAGGAAATGGTACCTaGTCTCATTCAGACCGTTTCCATCGTTATTACCAA +
Preference number: 3 (lower is better)
Translates to: SSASAKSSGNGT*SHSDRFHRYYQ
Trigger: TTGGTAATAACGATGGAAACGGTCTGAATGAGAGCAGGTACCATTTCCTGAGCTCTTAGCAGACGCTGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 72 bp AGCCTGGGCAACAGAGCAAGAGAGGGATTAAATGAGTaGAATTGGGAGCTTGTAGTTTCACGGAATACAAGC +
Preference number: 3 (lower is better)
Translates to: SLGNRAREGLNE*NWELVVSRNTS
Trigger: GCTTGTATTCCGTGAAACTACAAGCTCCCAATTCCACTCATTTAATCCCTCTCTTGCTCTGTTGCCCAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR TCA 72 bp GGAGCGAAGGGGTTGATCTCTAATAGCCAAAGTGTGTaGCAAATGAGAATTGAACTGTGTCCCAGAACATCC +
Preference number: 3 (lower is better)
Translates to: GAKGLISNSQSV*QMRIELCPRTS
Trigger: GGATGTTCTGGGACACAGTTCAATTCTCATTTGTCACACACTTTGGCTATTAGAGATCAACCCCTTCGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR TCA 72 bp TCAGATGAGGCATTCTTGGCAGGAATATTGCAGAAGTaGGTGTGTGTCTTCAGTGCATCTTATCGAGAGGCA +
Preference number: 3 (lower is better)
Translates to: SDEAFLAGILQK*VCVFSASYREA
Trigger: TGCCTCTCGATAAGATGCACTGAAGACACACACTCACTTCTGCAATATTCCTGCCAAGAATGCCTCATCTGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000646979.1
3UTR GCA 72 bp ATAACACAAGTGTTGTCACGATTTTCATTTAGCGTTTaGCAAGGCTGCCATTGCAAGACACAGGAGCGAAGG +
Preference number: 3 (lower is better)
Translates to: ITQVLSRFSFSV*QGCHCKTQERR
Trigger: CCTTCGCTCCTGTGTCTTGCAATGGCAGCCTTGGCAAACGCTAAATGAAAATCGTGACAACACTTGTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CCA 72 bp GGCCAAATACCAAAGCCAGCTAAAGTCACAGGGCCTTaGCCTGTATTCTTTGTTAAAAAGAGATTAACAACT +
Preference number: 3 (lower is better)
Translates to: GQIPKPAKVTGP*PVFFVKKRLTT
Trigger: AGTTGTTAATCTCTTTTTAACAAAGAATACAGGCCAAGGCCCTGTGACTTTAGCTGGCTTTGGTATTTGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000646979.1
3UTR TCA 72 bp GTTTGTCTGATGGTTATACTCGAGATTAGATTCAGATaGGGCATTCTTGGCAGGAATATTGCAGAAGTGAGT +
Preference number: 3 (lower is better)
Translates to: VCLMVILEIRFR*GILGRNIAEVS
Trigger: ACTCACTTCTGCAATATTCCTGCCAAGAATGCCTCATCTGAATCTAATCTCGAGTATAACCATCAGACAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000646979.1
3UTR GCA 72 bp CTCCGTATACCCTCTAAAATTGTTACTTACATGCTTTaGAGTTGGACATATTTTGGTTTAAATCCCAGCTCC +
Preference number: 3 (lower is better)
Translates to: LRIPSKIVTYML*SWTYFGLNPSS
Trigger: GGAGCTGGGATTTAAACCAAAATATGTCCAACTGCAAAGCATGTAAGTAACAATTTTAGAGGGTATACGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000646979.1
3UTR CCA 72 bp AATTGTTACTTACATGCTTTGCAGTTGGACATATTTTaGTTTAAATCCCAGCTCCACCAACACCTCAGACTT +
Preference number: 3 (lower is better)
Translates to: NCYLHALQLDIF*FKSQLHQHLRL
Trigger: AAGTCTGAGGTGTTGGTGGAGCTGGGATTTAAACCAAAATATGTCCAACTGCAAAGCATGTAAGTAACAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000646979.1
3UTR CAA 72 bp CCGCCCCCTGGCGGCCGGAGCCAATCAGCGCGGGCGTaGAGCCGGCCAATTAGCGCGTGCAGGGGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: PPPGGRSQSARA*SRPISACRGRP
Trigger: AGGCCGCCCCCTGCACGCGCTAATTGGCCGGCTCAACGCCCGCGCTGATTGGCTCCGGCCGCCAGGGGGCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000644232.1
CDS-3UTR TCA 90 bp CGGTACCCGCCCCCTGGCGGCCGGAGCCAATCAGCGCGGGCGTTGAGCCGGCCAAATCAGCGCGGGCGTTaGGCCGGCCAATTAGCGCGT +
Preference number: 4 (lower is better)
Translates to: RYPPPGGRSQSARALSRPNQRGR*AGQLAR
Trigger: ACGCGCTAATTGGCCGGCTCAACGCCCGCGCTGATT...TGGCCGGCTCAACGCCCGCGCTGATTGGCTCCGGCCGCCAGGGGGCGGGTACCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644232.1
CDS-3UTR CCA 90 bp GTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCGGGTAGGCCTCGGGGCTCCTaGGTGGACCGCAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: VVHSAAGQGPTLNQQGPGRPRGS*VDRSCH
Trigger: GTGGCAGCTGCGGTCCACCCAGGAGCCCCGAGGCCT...ACCCGGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp CGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTGCCACGCAGGGCTCCGCCGGTaGCGGTCCGCACGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: RNVLQRRPRGSWVDRSCHAGLRR*RSARAV
Trigger: CACAGCACGTGCGGACCGGCACCGGCGGAGCCCTGC...GTGGCAGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp CGCAGCAGCGGATCAGATCAGCTCTCAGGGCCCCGACACCCCCTGAGCACCTACAGGCTGGCAGCGAGCTaGTGGGCCCCGGCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: RSSGSDQLSGPRHPLSTYRLAAS*WAPAAV
Trigger: CACGGCTGCCGGGGCCCAGCAGCTCGCTGCCAGCCT...GTAGGTGCTCAGGGGGTGTCGGGGCCCTGAGAGCTGATCTGATCCGCTGCTGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp CAGGCGCATCTGGCCGGAGGCTGGCTCCTGGTTGAACAGCGCAGGCAGTGGCAGGCAGCTCCCGGAGTCTaGCAGCCCCTCCTCGTGCCC +
Preference number: 4 (lower is better)
Translates to: QAHLAGGWLLVEQRRQWQAAPGV*QPLLVP
Trigger: GGGCACGAGGAGGGGCTGCCAGACTCCGGGAGCTGC...CTGCCACTGCCTGCGCTGTTCAACCAGGAGCCAGCCTCCGGCCAGATGCGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571186.5
CDS-3UTR TCA 90 bp CAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCGGCAGGGGCCAACCCTaGACCAGCAGGGGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: QGPGARMLRLMGYSLEKSGRGQP*TSRGRV
Trigger: CACCCGGCCCCTGCTGGTTCAGGGTTGGCCCCTGCC...GCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp CGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTGCCACAGCAGCTCCAGCAGCTaGCGCGCCCGCAGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: RNVLQRRPRGSWVDRSCHSSSSS*RARSVP
Trigger: GGGGACACTGCGGGCGCGGCAGCTGCTGGAGCTGCT...GTGGCAGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp ACCAGGCATCCACCCAACTGGGCGCTAAAGGAGCCTGGAGCCGGGCCTGTGTCTAGGCTGGCAGCGAGCTaGTGGGCCCCGGCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: TRHPPNWALKEPGAGPVSRLAAS*WAPAAV
Trigger: CACGGCTGCCGGGGCCCAGCAGCTCGCTGCCAGCCT...AGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp CGGTACCCGCCCCCTGGCGGCCGGAGCCAATCAGCGCGGGCGTTGAGCCGGCCACCAGGTCTAACTGGATaGCAGGAATGGCCAGACTCC +
Preference number: 4 (lower is better)
Translates to: RYPPPGGRSQSARALSRPPGLTG*QEWPDS
Trigger: GGAGTCTGGCCATTCCTGGCATCCAGTTAGACCTGG...TGGCCGGCTCAACGCCCGCGCTGATTGGCTCCGGCCGCCAGGGGGCGGGTACCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644232.1
CDS-3UTR CCA 90 bp GTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCGGGTATGGAGCGAAGGGGCTaGTGGAGCCTGGCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: VVHSAAGQGPTLNQQGPGMERRG*WSLAGL
Trigger: CAGACCGGCCAGGCTCCACCAGCCCCTTCGCTCCAT...ACCCGGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp CAGGCATCCACCCAACTGGGCGCTAAAGGAGCCTGGAGCCGGGCCTGTGTCTGTGGCCAGCTGCCGTTCTaGCCAGTCCGGGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: QASTQLGAKGAWSRACVCGQLPF*PVRGGQ
Trigger: CTGGCCACCCCGGACTGGGCAGAACGGCAGCTGGCC...ACAGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp GTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCCCTCCTTGGGCCAGCTaGCGTTCTGCCCAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: VAVRNVLQRRPRGSWVDRPPWAS*RSAQSG
Trigger: CCCGGACTGGGCAGAACGGCAGCTGGCCCAAGGAGG...GCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR CCA 90 bp CAGGCATCCACCCAACTGGGCGCTAAAGGAGCCTGGAGCCGGGCCTGTGTCTGTGCAGCTCCCGGAGTCTaGCAGCCCCTCCTCGTGCCC +
Preference number: 4 (lower is better)
Translates to: QASTQLGAKGAWSRACVCAAPGV*QPLLVP
Trigger: GGGCACGAGGAGGGGCTGCCAGACTCCGGGAGCTGC...ACAGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCCTGGCAGCGAGCTGCTaGGCCCCGGCAGCCGTGAAC +
Preference number: 4 (lower is better)
Translates to: QGPGARMLRLMGYSLEKSLAASC*APAAVN
Trigger: GTTCACGGCTGCCGGGGCCCAGCAGCTCGCTGCCAG...GCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp TGGGCCCCGGCAGCCGTGAACTTGTTGTACTGGACGTCCATCACCCGGAGGGACCTCGGGGCTCCTGGGTaGACCGCAGCTGCCACCAGG +
Preference number: 4 (lower is better)
Translates to: WAPAAVNLLYWTSITRRDLGAPG*TAAATR
Trigger: CCTGGTGGCAGCTGCGGTCCACCCAGGAGCCCCGAG...GTCCCTCCGGGTGATGGACGTCCAGTACAACAAGTTCACGGCTGCCGGGGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618207.4
CDS-3UTR CCA 90 bp ACCAGGCATCCACCCAACTGGGCGCTAAAGGAGCCTGGAGCCGGGCCTGTGTCTAGGCCTCGGGGCTCCTaGGTGGACCGCAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: TRHPPNWALKEPGAGPVSRPRGS*VDRSCH
Trigger: GTGGCAGCTGCGGTCCACCCAGGAGCCCCGAGGCCT...AGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp AGGATCCGCACCAGTTTGGGGAAAGCCTGGGGGCCTGAGACAGGGCCCAGCGCAAGGGTGGCAGGGGCCTaGGCAGGCAGAATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RIRTSLGKAWGPETGPSARVAGA*AGRMGL
Trigger: CAGCCCCATTCTGCCTGCCCAGGCCCCTGCCACCCT...TGCGCTGGGCCCTGTCTCAGGCCCCCAGGCTTTCCCCAAACTGGTGCGGATCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000618207.4
CDS-3UTR TCA 90 bp CGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTGCCACGAAAGCCTGGGGGCCTaGGACAGGGCCCAGCGCAAA +
Preference number: 4 (lower is better)
Translates to: RNVLQRRPRGSWVDRSCHESLGA*DRAQRK
Trigger: TTTGCGCTGGGCCCTGTCTCAGGCCCCCAGGCTTTC...GTGGCAGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp GTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCGAAAGCCTGGGGGCCTaGGACAGGGCCCAGCGCAAA +
Preference number: 4 (lower is better)
Translates to: VAVRNVLQRRPRGSWVDRESLGA*DRAQRK
Trigger: TTTGCGCTGGGCCCTGTCTCAGGCCCCCAGGCTTTC...GCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp GTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCGGGTGGGAGGAAAAGGCCGTaGGGATCCGCACCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: VVHSAAGQGPTLNQQGPGGRKRP*GSAPVW
Trigger: CCAAACTGGTGCGGATCCTCACGGCCTTTTCCTCCC...ACCCGGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp GTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCGGGTGGTGTTCCTGGACACTaGATGGGATGGTGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: VVHSAAGQGPTLNQQGPGGVPGH*MGWWAS
Trigger: GGACGCCCACCATCCCATTCAGTGTCCAGGAACACC...ACCCGGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp GTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCGGGTCCCATCAGTGTCTTCTaGGTGCCCGGTGTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: VVHSAAGQGPTLNQQGPGPISVF*VPGVPC
Trigger: ACAGGGCACACCGGGCACTCAGAAGACACTGATGGG...ACCCGGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp GTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCGGAGACCTCTCCAGCTaGCGGGCATTGGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: VAVRNVLQRRPRGSWVDRGDLSS*RALGGG
Trigger: TCCCCCACCCAATGCCCGGCAGCTGGAGAGGTCTCC...GCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp CCGTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCCCACCTCCACTAGGATaGCATCCGGGCCTGCGGGCT +
Preference number: 4 (lower is better)
Translates to: PWLSAMSFREGLGAPGWTPPPLG*HPGLRA
Trigger: AGCCCGCAGGCCCGGATGGCATCCTAGTGGAGGTGG...GGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp TGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCACCTCCTTGGGCCAGCTaGCGTTCTGCCCAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: WLSAMSFREGLGAPGWTAPPWAS*RSAQSG
Trigger: CCCGGACTGGGCAGAACGGCAGCTGGCCCAAGGAGG...TGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp CGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTGCCACGGAGGAAGACTTCCCTaGCCCACCCCAAGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: RNVLQRRPRGSWVDRSCHGGRLP*PTPSLP
Trigger: CGGGAGGCTTGGGGTGGGGCAGGGAAGTCTTCCTCC...GTGGCAGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp GTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCGCAGGCAGGGCAGGGTaGAGCAGTCGCTCACTGGTC +
Preference number: 4 (lower is better)
Translates to: VAVRNVLQRRPRGSWVDRAGRAG*SSRSLV
Trigger: GACCAGTGAGCGACTGCTCCACCCTGCCCTGCCTGC...GCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GCCGTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCTGGGAGGGGGTACTTaGCTGGCCTGGGGCACCTCA +
Preference number: 4 (lower is better)
Translates to: AVAVRNVLQRRPRGSWVDLGGGT*LAWGTS
Trigger: TGAGGTGCCCCAGGCCAGCCAAGTACCCCCTCCCAG...GTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCACGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp AGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCGGGGCTGGTGGAGCCTaGCCGGTCTGGAGATGTTGG +
Preference number: 4 (lower is better)
Translates to: RCGSFRSRAGANPEPAGAGAGGA*PVWRCW
Trigger: CCAACATCTCCAGACCGGCCAGGCTCCACCAGCCCC...GGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTGCCACCCAGCTGCCGGGCATTaGGTGGGGGACGTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: RNVLQRRPRGSWVDRSCHPAAGH*VGDVLC
Trigger: GCACAAGACGTCCCCCACCCAATGCCCGGCAGCTGG...GTGGCAGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCGACACCTCCGAAGGCTaGCAGCGAGCTGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: QGPGARMLRLMGYSLEKSDTSEG*QRAAGP
Trigger: GGGCCCAGCAGCTCGCTGCCAGCCTTCGGAGGTGTC...GCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp ACCAGGCATCCACCCAACTGGGCGCTAAAGGAGCCTGGAGCCGGGCCTGTGTCTAGGGTGGCAGGGGCCTaGGCAGGCAGAATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TRHPPNWALKEPGAGPVSRVAGA*AGRMGL
Trigger: CAGCCCCATTCTGCCTGCCCAGGCCCCTGCCACCCT...AGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGAGGGTGGCAGGGGCCTaGGCAGGCAGAATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ARCGSFRSRAGANPEPAGRVAGA*AGRMGL
Trigger: CAGCCCCATTCTGCCTGCCCAGGCCCCTGCCACCCT...CCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CCGTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCTGTCCCCAGCCAACCTaGTGGCAGGGTGGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: PWLSAMSFREGLGAPGWTCPQPT*WQGGAS
Trigger: GGAAGCCCCACCCTGCCACCAGGTTGGCTGGGGACA...GGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp CGCAGCAGCGGATCAGATCAGCTCTCAGGGCCCCGACACCCCCTGAGCACCTACGCCTCCCGAGCCTGGTaGATTGGTCCCTGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: RSSGSDQLSGPRHPLSTYASRAW*IGPCPQ
Trigger: CTGGGGACAGGGACCAATCCACCAGGCTCGGGAGGC...GTAGGTGCTCAGGGGGTGTCGGGGCCCTGAGAGCTGATCTGATCCGCTGCTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp GTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCGGGTGTCTCAGGAGCAGGCTaGTGGAGGGCAGCTATGGAG +
Preference number: 4 (lower is better)
Translates to: VVHSAAGQGPTLNQQGPGVSGAG*WRAAME
Trigger: CTCCATAGCTGCCCTCCACCAGCCTGCTCCTGAGAC...ACCCGGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp GCAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGGCTGCCTTGGGGCTCTaGCAGGTAGGACCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AGAGCQDAEAHGIQPGEEAALGL*QVGPSR
Trigger: CCTGCTGGGTCCTACCTGTCAGAGCCCCAAGGCAGC...CTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp GCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCTGCCTTGGGGCTCTaGCAGGTAGGACCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ARCGSFRSRAGANPEPAGAALGL*QVGPSR
Trigger: CCTGCTGGGTCCTACCTGTCAGAGCCCCAAGGCAGC...CCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp GTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCGGAGGCCGTGGACAGTaGATCCACTGGGAGGGGGTA +
Preference number: 4 (lower is better)
Translates to: VAVRNVLQRRPRGSWVDRGGRGQ*IHWEGV
Trigger: TACCCCCTCCCAGTGGATTCACTGTCCACGGCCTCC...GCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp CAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCGAAAGCCTGGGGGCCTaGGACAGGGCCCAGCGCAAA +
Preference number: 4 (lower is better)
Translates to: QGPGARMLRLMGYSLEKSESLGA*DRAQRK
Trigger: TTTGCGCTGGGCCCTGTCTCAGGCCCCCAGGCTTTC...GCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp GCAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGGGGGAAGGTGGCTaGGAGCTGCGAGACACCCTC +
Preference number: 4 (lower is better)
Translates to: AGAGCQDAEAHGIQPGEELGEGG*ELRDTL
Trigger: GAGGGTGTCTCGCAGCTCTCAGCCACCTTCCCCCAG...CTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp TGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCACTGGGGGAAGGTGGCTaGGAGCTGCGAGACACCCTC +
Preference number: 4 (lower is better)
Translates to: WLSAMSFREGLGAPGWTALGEGG*ELRDTL
Trigger: GAGGGTGTCTCGCAGCTCTCAGCCACCTTCCCCCAG...TGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp CAGGCATCCACCCAACTGGGCGCTAAAGGAGCCTGGAGCCGGGCCTGTGTCTGTCTGGGGGAAGGTGGCTaGGAGCTGCGAGACACCCTC +
Preference number: 4 (lower is better)
Translates to: QASTQLGAKGAWSRACVCLGEGG*ELRDTL
Trigger: GAGGGTGTCTCGCAGCTCTCAGCCACCTTCCCCCAG...ACAGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp CGCAGCAGCGGATCAGATCAGCTCTCAGGGCCCCGACACCCCCTGAGCACCTACGGGCCCCGGCAGCCGTaGACTTGTTGTACTGGACGT +
Preference number: 4 (lower is better)
Translates to: RSSGSDQLSGPRHPLSTYGPRQP*TCCTGR
Trigger: ACGTCCAGTACAACAAGTTCACGGCTGCCGGGGCCC...GTAGGTGCTCAGGGGGTGTCGGGGCCCTGAGAGCTGATCTGATCCGCTGCTGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp TGGCCGGAGGCTGGCTCCTGGTTGAACAGCGCAGGCAGTGGCAGGCAGGGCAGGCAGCTTCCCCAAGGATaGCTTCGGATGCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: WPEAGSWLNSAGSGRQGRQLPQG*LRMPSS
Trigger: TGAGCTGGGCATCCGAAGGCATCCTTGGGGAAGCTG...CCTGCCCTGCCTGCCACTGCCTGCGCTGTTCAACCAGGAGCCAGCCTCCGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571186.5
CDS-3UTR GCA 90 bp GCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGCGCAGTGTCCCCGGCTaGAGCCGCTTCAGGTACCTC +
Preference number: 4 (lower is better)
Translates to: ARCGSFRSRAGANPEPAGRSVPG*SRFRYL
Trigger: GAGGTACCTGAAGCGGCTGCAGCCGGGGACACTGCG...CCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp CAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGAGCAGCTCCAGCAGCTaGCGCGCCCGCAGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: QCLLSARCALSRCLVGEQSSSSS*RARSVP
Trigger: GGGGACACTGCGGGCGCGGCAGCTGCTGGAGCTGCT...CTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp CTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTGTCTCCCCATGCTGCTaGAGGGACTCCCACAGCGCC +
Preference number: 4 (lower is better)
Translates to: LSAMSFREGLGAPGWTAAVSPCC*RDSHSA
Trigger: GGCGCTGTGGGAGTCCCTGCAGCAGCATGGGGAGAC...AGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618327.4
CDS-3UTR GCA 90 bp GTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCGAGGCACTGGGCAAGTaGTGCCCTTCCAGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: VAVRNVLQRRPRGSWVDREALGK*CPSRGL
Trigger: GAGCCCTCTGGAAGGGCAGCACTTGCCCAGTGCCTC...GCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp CAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGGCAGCTCCCGGAGTCTaGCAGCCCCTCCTCGTGCCC +
Preference number: 4 (lower is better)
Translates to: QCLLSARCALSRCLVGEQAAPGV*QPLLVP
Trigger: GGGCACGAGGAGGGGCTGCCAGACTCCGGGAGCTGC...CTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCCCGGAGGCTGGCTCCTaGTTGAACAGCGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: VAVRNVLQRRPRGSWVDRPEAGS*LNSAGS
Trigger: ACTGCCTGCGCTGTTCAACCAGGAGCCAGCCTCCGG...GCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTTTCTCCAGGCGCATCTaGCCGGAGGCTGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LSAMSFREGLGAPGWTAAFSRRI*PEAGSW
Trigger: CCAGGAGCCAGCCTCCGGCCAGATGCGCCTGGAGAA...AGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp AGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCGAGGGGGTACTTGGCTaGCCTGGGGCACCTCACCAT +
Preference number: 4 (lower is better)
Translates to: RCGSFRSRAGANPEPAGAEGVLG*PGAPHH
Trigger: ATGGTGAGGTGCCCCAGGCCAGCCAAGTACCCCCTC...GGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGGAGCCTGGCCGGTCTaGAGATGTTGGGAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: ARCGSFRSRAGANPEPAGGAWPV*RCWEAV
Trigger: CACGGCCTCCCAACATCTCCAGACCGGCCAGGCTCC...CCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GCAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGGGGGCTGGTGGAGCCTaGCCGGTCTGGAGATGTTGG +
Preference number: 4 (lower is better)
Translates to: AGAGCQDAEAHGIQPGEEGAGGA*PVWRCW
Trigger: CCAACATCTCCAGACCGGCCAGGCTCCACCAGCCCC...CTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCGGGGCTGGTGGAGCCTaGCCGGTCTGGAGATGTTGG +
Preference number: 4 (lower is better)
Translates to: QGPGARMLRLMGYSLEKSGAGGA*PVWRCW
Trigger: CCAACATCTCCAGACCGGCCAGGCTCCACCAGCCCC...GCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCCTGCCGGGCATTGGGTaGGGGACGTCTTGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: VAVRNVLQRRPRGSWVDRLPGIG*GTSCAL
Trigger: CAGAGCACAAGACGTCCCCCACCCAATGCCCGGCAG...GCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CAGGCATCCACCCAACTGGGCGCTAAAGGAGCCTGGAGCCGGGCCTGTGTCTGTCAGCGGGCGGGAGGCTaGAAGATCAGCCCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: QASTQLGAKGAWSRACVCQRAGG*KISPAR
Trigger: TCTGGCTGGGCTGATCTTCCAGCCTCCCGCCCGCTG...ACAGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR CCA 90 bp CTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTCAGCGGGCGGGAGGCTaGAAGATCAGCCCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: LSAMSFREGLGAPGWTAAQRAGG*KISPAR
Trigger: TCTGGCTGGGCTGATCTTCCAGCCTCCCGCCCGCTG...AGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR CCA 90 bp CAGGCATCCACCCAACTGGGCGCTAAAGGAGCCTGGAGCCGGGCCTGTGTCTGTTCCAGGGAGAAGTCTTaGCCCGCCGCCTCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: QASTQLGAKGAWSRACVCSREKS*PAASKA
Trigger: GGCCTTGGAGGCGGCGGGCCAAGACTTCTCCCTGGA...ACAGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR CCA 90 bp AGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCGGATCCGCACCAGTTTaGGGAAAGCCTGGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RCGSFRSRAGANPEPAGAGSAPV*GKPGGL
Trigger: CAGGCCCCCAGGCTTTCCCCAAACTGGTGCGGATCC...GGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCGGGTCAGCAGAGCAAGATGTaGTTCATTCCGCAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: VVHSAAGQGPTLNQQGPGQQSKM*FIPQPG
Trigger: GCCCGGCTGCGGAATGAACCACATCTTGCTCTGCTG...ACCCGGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTGCCACGGCGCTAAAGGAGCCTaGAGCCGGGCCTGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: RNVLQRRPRGSWVDRSCHGAKGA*SRACVC
Trigger: ACAGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCC...GTGGCAGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GTGACCAGCTGGAGGCACGTGGTAGACCAGGCATCTTCACAAAGCCCGCTGCTGCTCGGGGCTCCTGGGTaGACCGCAGCTGCCACCAGG +
Preference number: 4 (lower is better)
Translates to: VTSWRHVVDQASSQSPLLLGAPG*TAAATR
Trigger: CCTGGTGGCAGCTGCGGTCCACCCAGGAGCCCCGAG...CAGCAGCGGGCTTTGTGAAGATGCCTGGTCTACCACGTGCCTCCAGCTGGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp GCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGCCCAGGCCCCAAGCTTaGAGTGGCGGGGAACTCCCT +
Preference number: 4 (lower is better)
Translates to: ARCGSFRSRAGANPEPAGPRPQA*SGGELP
Trigger: AGGGAGTTCCCCGCCACTCCAAGCTTGGGGCCTGGG...CCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp AGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGGCTGCCTTGGGGCTCTaGCAGGTAGGACCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RLGVAHQCLLSARCALSRAALGL*QVGPSR
Trigger: CCTGCTGGGTCCTACCTGTCAGAGCCCCAAGGCAGC...CCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp ACCAGGCATCCACCCAACTGGGCGCTAAAGGAGCCTGGAGCCGGGCCTGTGTCTAGGCTGGCTCCTGGTTaGACAGCGCAGGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: TRHPPNWALKEPGAGPVSRLAPG*TAQAVA
Trigger: TGCCACTGCCTGCGCTGTTCAACCAGGAGCCAGCCT...AGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp TGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGGAGGCCGTGGACAGTaGATCCACTGGGAGGGGGTA +
Preference number: 4 (lower is better)
Translates to: WLSAMSFREGLGAPGWTAGGRGQ*IHWEGV
Trigger: TACCCCCTCCCAGTGGATTCACTGTCCACGGCCTCC...TGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp GACTTCAGCTGGGGGAAGGTGGCTGAGAGCTGCGAGACACCCTCGTCCCCGATCGGGCCCCGGCAGCCGTaGACTTGTTGTACTGGACGT +
Preference number: 4 (lower is better)
Translates to: DFSWGKVAESCETPSSPIGPRQP*TCCTGR
Trigger: ACGTCCAGTACAACAAGTTCACGGCTGCCGGGGCCC...GATCGGGGACGAGGGTGTCTCGCAGCTCTCAGCCACCTTCCCCCAGCTGAAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000618207.4
CDS-3UTR TCA 90 bp ACCAGGCATCCACCCAACTGGGCGCTAAAGGAGCCTGGAGCCGGGCCTGTGTCTCGGGTGCCAGGATGCTaGGGCTCATGGGATACAGCC +
Preference number: 4 (lower is better)
Translates to: TRHPPNWALKEPGAGPVSRVPGC*GSWDTA
Trigger: GGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCG...AGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp CGCATCTGGCCGGAGGCTGGCTCCTGGTTGAACAGCGCAGGCAGTGGCAGGCAGCCAGTGCTTCAGGTCTaGCGGAAGCTCCTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: RIWPEAGSWLNSAGSGRQPVLQV*RKLLWE
Trigger: TTCCCAGAGGAGCTTCCGGCAGACCTGAAGCACTGG...CTGCCTGCCACTGCCTGCGCTGTTCAACCAGGAGCCAGCCTCCGGCCAGATGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571186.5
CDS-3UTR GCA 90 bp GCAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGGGGCAGGTTCAGGCATaGTGGGCAGGTCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: AGAGCQDAEAHGIQPGEEGQVQA*WAGQWL
Trigger: CAGCCACTGACCTGCCCAGCATGCCTGAACCTGCCC...CTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp AGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCTTGGTCTCCCCATGCTaGTGCAGGGACTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: RCGSFRSRAGANPEPAGALVSPC*CRDSHS
Trigger: GCTGTGGGAGTCCCTGCAGCAGCATGGGGAGACCAA...GGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618327.4
CDS-3UTR GCA 90 bp GCCGTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACTTGGTCTCCCCATGCTaGTGCAGGGACTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: AVAVRNVLQRRPRGSWVDLVSPC*CRDSHS
Trigger: GCTGTGGGAGTCCCTGCAGCAGCATGGGGAGACCAA...GTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618327.4
CDS-3UTR GCA 90 bp GTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCGGCACTGGCTTCCAGTaGTTCAGGTCTGCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: VAVRNVLQRRPRGSWVDRGTGFQ*FRSAGS
Trigger: GCTTCCGGCAGACCTGAAGCACTGGAAGCCAGTGCC...GCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381835.9
CDS-3UTR CCA 90 bp TGTCTGGTCGGAGAGCAGGGTGGAGAAGTACTTTCTCTGTGGCCCGGTGCAGTGGCAGCTCCCGGAGTCTaGCAGCCCCTCCTCGTGCCC +
Preference number: 4 (lower is better)
Translates to: CLVGEQGGEVLSLWPGAVAAPGV*QPLLVP
Trigger: GGGCACGAGGAGGGGCTGCCAGACTCCGGGAGCTGC...CACTGCACCGGGCCACAGAGAAAGTACTTCTCCACCCTGCTCTCCGACCAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp ACTGGACGTCCATCACCCGGAGGGACACCATGTCCGGAAGCACACGAGCCAAGCCTGGGAGGGGGTACTTaGCTGGCCTGGGGCACCTCA +
Preference number: 4 (lower is better)
Translates to: TGRPSPGGTPCPEAHEPSLGGGT*LAWGTS
Trigger: TGAGGTGCCCCAGGCCAGCCAAGTACCCCCTCCCAG...GCTTGGCTCGTGTGCTTCCGGACATGGTGTCCCTCCGGGTGATGGACGTCCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618207.4
CDS-3UTR CCA 90 bp GTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGGGTGGAGAAGTACGGAGCCTGGCCGGTCTaGAGATGTTGGGAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: VPGVPCQGVWSESRVEKYGAWPV*RCWEAV
Trigger: CACGGCCTCCCAACATCTCCAGACCGGCCAGGCTCC...GTACTTCTCCACCCTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CAGGCATCCACCCAACTGGGCGCTAAAGGAGCCTGGAGCCGGGCCTGTGTCTGTTGCTGGGCAGGTCAGTaGCTGATGGAGCGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: QASTQLGAKGAWSRACVCCWAGQ*LMERRG
Trigger: GCCCCTTCGCTCCATCAGCCACTGACCTGCCCAGCA...ACAGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CAGGCATCCACCCAACTGGGCGCTAAAGGAGCCTGGAGCCGGGCCTGTGTCTGTCTGCCGGGCATTGGGTaGGGGACGTCTTGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: QASTQLGAKGAWSRACVCLPGIG*GTSCAL
Trigger: CAGAGCACAAGACGTCCCCCACCCAATGCCCGGCAG...ACAGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GAGCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGCCAGCTGCCGGGCATTaGGTGGGGGACGTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: EQDVVHSAAGQGPTLNQQPAAGH*VGDVLC
Trigger: GCACAAGACGTCCCCCACCCAATGCCCGGCAGCTGG...CTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCAGCCTCCTCGGCCTCGTaGGCGCAGTGCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GCQDAEAHGIQPGEELCPASSAS*AQCSSS
Trigger: GGAGCTGCTGCACTGCGCCCACGAGGCCGAGGAGGC...TGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR CCA 90 bp ACCAGGCATCCACCCAACTGGGCGCTAAAGGAGCCTGGAGCCGGGCCTGTGTCTAGTTTGGGGAAAGCCTaGGGGCCTGAGACAGGGCCC +
Preference number: 4 (lower is better)
Translates to: TRHPPNWALKEPGAGPVSSLGKA*GPETGP
Trigger: GGGCCCTGTCTCAGGCCCCCAGGCTTTCCCCAAACT...AGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GCAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGGGATCCGCACCAGTTTaGGGAAAGCCTGGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: AGAGCQDAEAHGIQPGEEGSAPV*GKPGGL
Trigger: CAGGCCCCCAGGCTTTCCCCAAACTGGTGCGGATCC...CTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GCCGTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACTCAGCTGGGGGAAGGTaGCTGAGAGCTGCGAGACAC +
Preference number: 4 (lower is better)
Translates to: AVAVRNVLQRRPRGSWVDSAGGR*LRAARH
Trigger: GTGTCTCGCAGCTCTCAGCCACCTTCCCCCAGCTGA...GTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCACGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp TGGAGCCGGGCCTGTGTCTGTCAGCAGAGCAAGATGTGGTTCATTCCGCAGCCGGACACCTCCGAAGGCTaGCAGCGAGCTGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: WSRACVCQQSKMWFIPQPDTSEG*QRAAGP
Trigger: GGGCCCAGCAGCTCGCTGCCAGCCTTCGGAGGTGTC...CGGCTGCGGAATGAACCACATCTTGCTCTGCTGACAGACACAGGCCCGGCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp TGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGGCGCTAAAGGAGCCTaGAGCCGGGCCTGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: WLSAMSFREGLGAPGWTAGAKGA*SRACVC
Trigger: ACAGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCC...TGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CCCAGCCTGTTGCAATCTGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCAGGCCTCGGGGCTCCTaGGTGGACCGCAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: PSLLQSGELAGWGLPISVRPRGS*VDRSCH
Trigger: GTGGCAGCTGCGGTCCACCCAGGAGCCCCGAGGCCT...GACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCAGATTGCAACAGGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGGGTGGAGAAGTACCTCTGTCACTCCCTCTaGCCTGGCCGTGGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: VPGVPCQGVWSESRVEKYLCHSL*PGRGCP
Trigger: CGGACAGCCACGGCCAGGCCAGAGGGAGTGACAGAG...GTACTTCTCCACCCTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCCCCTGTCAAGGTGTCTaGTCGGAGAGCAGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: VAVRNVLQRRPRGSWVDRPCQGV*SESRVE
Trigger: CTCCACCCTGCTCTCCGACCAGACACCTTGACAGGG...GCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCGGGTCAGCCTGTTGCAATCTaGGGAATTAGCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VVHSAAGQGPTLNQQGPGQPVAI*GISRLG
Trigger: CCCCAGCCTGCTAATTCCCCAGATTGCAACAGGCTG...ACCCGGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GAGCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGCCCACTACCCAGCGCTaGCTCAGCTGGCCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: EQDVVHSAAGQGPTLNQQPTTQR*LSWPRA
Trigger: AGCTCTGGGCCAGCTGAGCCAGCGCTGGGTAGTGGG...CTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp AGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCGAGTGGTTTCGGCTTTaGGGTCAGGCCACGGGGGTT +
Preference number: 4 (lower is better)
Translates to: RCGSFRSRAGANPEPAGAEWFRL*GQATGV
Trigger: AACCCCCGTGGCCTGACCCCAAAGCCGAAACCACTC...GGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp CTCCAGGCGCATCTGGCCGGAGGCTGGCTCCTGGTTGAACAGCGCAGGCAGTGGCTCCACACGGAGAGCTaGCTTCCAGTGCTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: LQAHLAGGWLLVEQRRQWLHTES*LPVLQV
Trigger: GACCTGAAGCACTGGAAGCCAGCTCTCCGTGTGGAG...CCACTGCCTGCGCTGTTCAACCAGGAGCCAGCCTCCGGCCAGATGCGCCTGGAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571186.5
CDS-3UTR TCA 90 bp GCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGCGAAGCCGTCTAGGATaGGCAGAACGCGGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: ARCGSFRSRAGANPEPAGRSRLG*AERGQV
Trigger: GACCTGACCGCGTTCTGCTCATCCTAGACGGCTTCG...CCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR TCA 90 bp GAGCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGCGACATAGAGTCCCGTaGGCGTGGAGGGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: EQDVVHSAAGQGPTLNQQRHRVP*AWRAAW
Trigger: CCAAGCTGCCCTCCACGCTCACGGGACTCTATGTCG...CTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR TCA 90 bp AGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGCGACATAGAGTCCCGTaGGCGTGGAGGGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: RLGVAHQCLLSARCALSRRHRVP*AWRAAW
Trigger: CCAAGCTGCCCTCCACGCTCACGGGACTCTATGTCG...CCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR TCA 90 bp GCAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGGGTGTTCCTGGACACTaGATGGGATGGTGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: AGAGCQDAEAHGIQPGEEGVPGH*MGWWAS
Trigger: GGACGCCCACCATCCCATTCAGTGTCCAGGAACACC...CTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp CTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTGGTGTTCCTGGACACTaGATGGGATGGTGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: LSAMSFREGLGAPGWTAAGVPGH*MGWWAS
Trigger: GGACGCCCACCATCCCATTCAGTGTCCAGGAACACC...AGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp CAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCCCCATCAGTGTCTTCTaGGTGCCCGGTGTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: QGPGARMLRLMGYSLEKSPISVF*VPGVPC
Trigger: ACAGGGCACACCGGGCACTCAGAAGACACTGATGGG...GCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp GCGTCTCCACATGAGGACACCTCCGAAGGCTGGCAGCGAGCTGCTGGGCCCCGGAAAAGCAGCTGCCACTaGAGCCCAGCCTGTTGCAAT +
Preference number: 4 (lower is better)
Translates to: ASPHEDTSEGWQRAAGPRKSSCH*SPACCN
Trigger: ATTGCAACAGGCTGGGCTTCAGTGGCAGCTGCTTTT...CCGGGGCCCAGCAGCTCGCTGCCAGCCTTCGGAGGTGTCCTCATGTGGAGACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618207.4
CDS-3UTR TCA 90 bp AGGGCAGCTACAGCCAGACTAGCGCCTGGCTGGGACTGTCGGGGATGCGGTTTGTCACAGCATTTGCCCTaGGGAGCAGGACAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: RAATARLAPGWDCRGCGLSQHLP*GAGQRA
Trigger: TGCCCGCTGTCCTGCTCCTCAGGGCAAATGCTGTGA...CAAACCGCATCCCCGACAGTCCCAGCCAGGCGCTAGTCTGGCTGTAGCTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp CCGTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCCACAAAGCCCGCTGCTaGTCAGCTTTGGCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: PWLSAMSFREGLGAPGWTHKARC*SALAAN
Trigger: GTTGGCTGCCAAAGCTGATCAGCAGCGGGCTTTGTG...GGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp CGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTGCCACTGGCACACTGTGAGCTaGCTTGGGGCTCTGACAGGT +
Preference number: 4 (lower is better)
Translates to: RNVLQRRPRGSWVDRSCHWHTVS*LGALTG
Trigger: ACCTGTCAGAGCCCCAAGGCAGCTCACAGTGTGCCA...GTGGCAGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp GCCGTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCCAGCCTCAGAGATTTaGCAGAGCCCATGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: AVAVRNVLQRRPRGSWVDPASEI*QSPWGR
Trigger: TCTGCCCCATGGGCTCTGGCAAATCTCTGAGGCTGG...GTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp CCGTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCCTTGCCCAGTACATGTaGATCAGGAGGCGTGAGGCG +
Preference number: 4 (lower is better)
Translates to: PWLSAMSFREGLGAPGWTLAQYM*IRRREA
Trigger: CGCCTCACGCCTCCTGATGCACATGTACTGGGCAAG...GGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp CCGTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGGCAAATGCCAGTGCTaGGGAGGTCCAGGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: PWLSAMSFREGLGAPGWTGKCQC*GGPGRS
Trigger: ACTTCTCCCTGGACCTCCGCAGCACTGGCATTTGCC...GGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp CGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTGCCACATCCAGAGGGGCAAATaGCAGTGCTGCGGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: RNVLQRRPRGSWVDRSCHIQRGK*QCCGGP
Trigger: TGGACCTCCGCAGCACTGGCATTTGCCCCTCTGGAT...GTGGCAGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp TGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAAGCTTGGTCTCCCCATaGTGCTGCAGGGACTCCCAC +
Preference number: 4 (lower is better)
Translates to: WLSAMSFREGLGAPGWTASLVSP*CCRDSH
Trigger: GTGGGAGTCCCTGCAGCAGCATGGGGAGACCAAGCT...TGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618327.4
CDS-3UTR GCA 90 bp CGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTGCCACTCCAGGTCCAGATGCTaGAGGGAGGAAAAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: RNVLQRRPRGSWVDRSCHSRSRC*REEKAV
Trigger: CACGGCCTTTTCCTCCCTGCAGCATCTGGACCTGGA...GTGGCAGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp GCCGTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACTCCAGGTCCAGATGCTaGAGGGAGGAAAAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: AVAVRNVLQRRPRGSWVDSRSRC*REEKAV
Trigger: CACGGCCTTTTCCTCCCTGCAGCATCTGGACCTGGA...GTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp GAGCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGCCCAGATCGCACCACTaGACGCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: EQDVVHSAAGQGPTLNQQPRSHH*TPAWAT
Trigger: TGTTGCCCAGGCTGGCGTGCAGTGGTGCGATCTGGG...CTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp AGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGCCCAGATCGCACCACTaGACGCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: RLGVAHQCLLSARCALSRPRSHH*TPAWAT
Trigger: TGTTGCCCAGGCTGGCGTGCAGTGGTGCGATCTGGG...CCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp GTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCGGGTAGCGTTTGCCAAGGCTaGCATTGCAAGACACAGGAG +
Preference number: 4 (lower is better)
Translates to: VVHSAAGQGPTLNQQGPGSVCQG*HCKTQE
Trigger: CTCCTGTGTCTTGCAATGGCAGCCTTGGCAAACGCT...ACCCGGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp GTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCGGGACGAACCTGCAGTaGCGAGTGGTTTCGGCTTTG +
Preference number: 4 (lower is better)
Translates to: VAVRNVLQRRPRGSWVDRGTNLQ*RVVSAL
Trigger: CAAAGCCGAAACCACTCGGCACTGCAGGTTCGTCCC...GCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp GAGCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGACCCAGCAGGGCGTaGAGCCAGGCAACGCATTGT +
Preference number: 4 (lower is better)
Translates to: EQDVVHSAAGQGPTLNQQGPSRA*SQATHC
Trigger: ACAATGCGTTGCCTGGCTCCACGCCCTGCTGGGTCC...CTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp AGGATCCGCACCAGTTTGGGGAAAGCCTGGGGGCCTGAGACAGGGCCCAGCGCAGCCCCAACTCCATGGTaGCACACTGTGAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: RIRTSLGKAWGPETGPSAAPTPW*HTVSCL
Trigger: AAGGCAGCTCACAGTGTGCCACCATGGAGTTGGGGC...TGCGCTGGGCCCTGTCTCAGGCCCCCAGGCTTTCCCCAAACTGGTGCGGATCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000618207.4
CDS-3UTR CCA 90 bp TGGCCGGAGGCTGGCTCCTGGTTGAACAGCGCAGGCAGTGGCAGGCAGGGCAGGTGCCGGAAGCTCCTCTaGGAAGGGTCTTTTCTGACT +
Preference number: 4 (lower is better)
Translates to: WPEAGSWLNSAGSGRQGRCRKLL*EGSFLT
Trigger: AGTCAGAAAAGACCCTTCCCAGAGGAGCTTCCGGCA...CCTGCCCTGCCTGCCACTGCCTGCGCTGTTCAACCAGGAGCCAGCCTCCGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571186.5
CDS-3UTR CCA 90 bp GTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGGGTGGAGAAGTACCCGGAGGCTGGCTCCTaGTTGAACAGCGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: VPGVPCQGVWSESRVEKYPEAGS*LNSAGS
Trigger: ACTGCCTGCGCTGTTCAACCAGGAGCCAGCCTCCGG...GTACTTCTCCACCCTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGGGTGGAGAAGTACCATCTGGCCGGAGGCTaGCTCCTGGTTGAACAGCGC +
Preference number: 4 (lower is better)
Translates to: VPGVPCQGVWSESRVEKYHLAGG*LLVEQR
Trigger: GCGCTGTTCAACCAGGAGCCAGCCTCCGGCCAGATG...GTACTTCTCCACCCTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp AGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCGCCCATGGGGCAGAGTaGAGATGGTGGGGACAAACT +
Preference number: 4 (lower is better)
Translates to: RCGSFRSRAGANPEPAGAAHGAE*RWWGQT
Trigger: AGTTTGTCCCCACCATCTCCACTCTGCCCCATGGGC...GGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTGCCACGCCCATGGGGCAGAGTaGAGATGGTGGGGACAAACT +
Preference number: 4 (lower is better)
Translates to: RNVLQRRPRGSWVDRSCHAHGAE*RWWGQT
Trigger: AGTTTGTCCCCACCATCTCCACTCTGCCCCATGGGC...GTGGCAGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp AGCAGAGCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAATGGAGCGAAGGGGCTaGTGGAGCCTGGCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: SRARCGSFRSRAGANPEPMERRG*WSLAGL
Trigger: CAGACCGGCCAGGCTCCACCAGCCCCTTCGCTCCAT...TGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGCTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCCAGGTTCAGGCATGCTaGGCAGGTCAGTGGCTGATG +
Preference number: 4 (lower is better)
Translates to: VAVRNVLQRRPRGSWVDRQVQAC*AGQWLM
Trigger: CATCAGCCACTGACCTGCCCAGCATGCCTGAACCTG...GCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGTCAGCCAGGCCTCCTTaGGCCAGCTGCCGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: QCLLSARCALSRCLVGEQSARPP*ASCRSA
Trigger: GGCAGAACGGCAGCTGGCCCAAGGAGGCCTGGCTGA...CTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR CCA 90 bp GCTTCCAGTCTGTTCCCCTCTCACCGCCCCATTAGTGTCCCATTAGCTGTTTCCGCCTTGCTCAGGCTCTaGACCAGGCGGCCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: ASSLFPSHRPISVPLAVSALLRL*TRRPRG
Trigger: GCCCCGGGGCCGCCTGGTCCAGAGCCTGAGCAAGGC...GGAAACAGCTAATGGGACACTAATGGGGCGGTGAGAGGGGAACAGACTGGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR CCA 90 bp TGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGTGACTGAGAAGAAGTaGCCGGTCCCGGAGGAGCGT +
Preference number: 4 (lower is better)
Translates to: WLSAMSFREGLGAPGWTAVTEKK*PVPEER
Trigger: ACGCTCCTCCGGGACCGGCCACTTCTTCTCAGTCAC...TGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR CCA 90 bp GCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGAGGGCCTCTGAGAGCTaGCACACTGCCCGGCACAAA +
Preference number: 4 (lower is better)
Translates to: ARCGSFRSRAGANPEPAGRASES*HTARHK
Trigger: TTTGTGCCGGGCAGTGTGCCAGCTCTCAGAGGCCCT...CCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR CCA 90 bp GCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCCGCGGTGGGTGTTaGACTAAGCCTTTGGCCATC +
Preference number: 4 (lower is better)
Translates to: ARCGSFRSRAGANPEPAGARGGC*TKPLAI
Trigger: GATGGCCAAAGGCTTAGTCCAACACCCACCGCGGGC...CCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR CCA 90 bp GTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGGGTGGAGAAGTACAGTTTGGGGAAAGCCTaGGGGCCTGAGACAGGGCCC +
Preference number: 4 (lower is better)
Translates to: VPGVPCQGVWSESRVEKYSLGKA*GPETGP
Trigger: GGGCCCTGTCTCAGGCCCCCAGGCTTTCCCCAAACT...GTACTTCTCCACCCTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp TGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTGACACCTCCGAAGGCTaGCAGCGAGCTGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: WGISRLGVAHQCLLSARCDTSEG*QRAAGP
Trigger: GGGCCCAGCAGCTCGCTGCCAGCCTTCGGAGGTGTC...ACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GCGTCTCCACATGAGGACACCTCCGAAGGCTGGCAGCGAGCTGCTGGGCCCCGGTTCCTGGACACTGAATaGGATGGTGGGCGTCCACAT +
Preference number: 4 (lower is better)
Translates to: ASPHEDTSEGWQRAAGPRFLDTE*DGGRPH
Trigger: ATGTGGACGCCCACCATCCCATTCAGTGTCCAGGAA...CCGGGGCCCAGCAGCTCGCTGCCAGCCTTCGGAGGTGTCCTCATGTGGAGACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618207.4
CDS-3UTR CCA 90 bp TCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGGGTGGGGCGCTAAAGGAGCCTaGAGCCGGGCCTGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: SSECPVCPVKVSGRRAGWGAKGA*SRACVC
Trigger: ACAGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCC...CCACCCTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GCCGTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACAGGCATCCACCCAACTaGGCGCTAAAGGAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: AVAVRNVLQRRPRGSWVDRHPPN*ALKEPG
Trigger: TCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCT...GTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp TGGAGCCGGGCCTGTGTCTGTCAGCAGAGCAAGATGTGGTTCATTCCGCAGCCGCTCTGTCACTCCCTCTaGCCTGGCCGTGGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: WSRACVCQQSKMWFIPQPLCHSL*PGRGCP
Trigger: CGGACAGCCACGGCCAGGCCAGAGGGAGTGACAGAG...CGGCTGCGGAATGAACCACATCTTGCTCTGCTGACAGACACAGGCCCGGCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp AGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCGGGGAATTAGCAGGCTaGGGGTTGCCCATCAGTGTC +
Preference number: 4 (lower is better)
Translates to: RCGSFRSRAGANPEPAGAGELAG*GLPISV
Trigger: GACACTGATGGGCAACCCCCAGCCTGCTAATTCCCC...GGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CGCAGCAGCGGATCAGATCAGCTCTCAGGGCCCCGACACCCCCTGAGCACCTACAAGGGCTGGTGCATCTaGCCAGGCCTAGCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: RSSGSDQLSGPRHPLSTYKGWCI*PGLALA
Trigger: AGCCAAAGCTAGGCCTGGCCAGATGCACCAGCCCTT...GTAGGTGCTCAGGGGGTGTCGGGGCCCTGAGAGCTGATCTGATCCGCTGCTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp AGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCTTCCCTGCTAAGGGCTaGTGCATCTGGCCAGGCCTA +
Preference number: 4 (lower is better)
Translates to: RCGSFRSRAGANPEPAGAFPAKG*CIWPGL
Trigger: TAGGCCTGGCCAGATGCACCAGCCCTTAGCAGGGAA...GGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CGCAGCAGCGGATCAGATCAGCTCTCAGGGCCCCGACACCCCCTGAGCACCTACATCAGACTGATCCTGTaGGCACTGGGGCTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: RSSGSDQLSGPRHPLSTYIRLIL*ALGLVS
Trigger: GCTCACCAGCCCCAGTGCCCACAGGATCAGTCTGAT...GTAGGTGCTCAGGGGGTGTCGGGGCCCTGAGAGCTGATCTGATCCGCTGCTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp CAGGCATCCACCCAACTGGGCGCTAAAGGAGCCTGGAGCCGGGCCTGTGTCTGTCCACGCAGCCGGGTCTaGATTCCTCAGACCCTCTTG +
Preference number: 4 (lower is better)
Translates to: QASTQLGAKGAWSRACVCPRSRV*IPQTLL
Trigger: CAAGAGGGTCTGAGGAATCCAGACCCGGCTGCGTGG...ACAGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp GGGGTCCTAGCCAACTATTCCGTAGTGGCACTGAGGCCCCCAGCCAACAGCCAGGCCCCAAGCTTGGAGTaGCGGGGAACTCCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: GVLANYSVVALRPPANSQAPSLE*RGTPSR
Trigger: CCTTGAGGGAGTTCCCCGCCACTCCAAGCTTGGGGC...CTGGCTGTTGGCTGGGGGCCTCAGTGCCACTACGGAATAGTTGGCTAGGACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp GGGGTCCTAGCCAACTATTCCGTAGTGGCACTGAGGCCCCCAGCCAACAGCCAGCAGCGAGTCCCCAGATaGTGCTGGTGCCCTCACAGC +
Preference number: 4 (lower is better)
Translates to: GVLANYSVVALRPPANSQQRVPR*CWCPHS
Trigger: GCTGTGAGGGCACCAGCACCATCTGGGGACTCGCTG...CTGGCTGTTGGCTGGGGGCCTCAGTGCCACTACGGAATAGTTGGCTAGGACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp GCCCAGCCTGTTGCAATCTGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTGCTGCCTTGGGGCTCTaGCAGGTAGGACCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AQPVAIWGISRLGVAHQCAALGL*QVGPSR
Trigger: CCTGCTGGGTCCTACCTGTCAGAGCCCCAAGGCAGC...ACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCAGATTGCAACAGGCTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp GGGTCCCTCAGGGAGATTCAGGCAGCTCAACGAGGAACTGGAGAAAGGCATGGGGCTGCCTTGGGGCTCTaGCAGGTAGGACCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GSLREIQAAQRGTGERHGAALGL*QVGPSR
Trigger: CCTGCTGGGTCCTACCTGTCAGAGCCCCAAGGCAGC...CCCATGCCTTTCTCCAGTTCCTCGTTGAGCTGCCTGAATCTCCCTGAGGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571186.5
CDS-3UTR TCA 90 bp GGGGTCCTAGCCAACTATTCCGTAGTGGCACTGAGGCCCCCAGCCAACAGCCAGGTAGGGCTGTGGCTGTaGCTGAGAAGAAGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: GVLANYSVVALRPPANSQVGLWL*LRRSGR
Trigger: CCGGCCACTTCTTCTCAGTCACAGCCACAGCCCTAC...CTGGCTGTTGGCTGGGGGCCTCAGTGCCACTACGGAATAGTTGGCTAGGACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp GAGCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGTAGGGCTGTGGCTGTaGCTGAGAAGAAGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: EQDVVHSAAGQGPTLNQQVGLWL*LRRSGR
Trigger: CCGGCCACTTCTTCTCAGTCACAGCCACAGCCCTAC...CTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR TCA 90 bp CGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTGCCACTTCTCCTCTGCTGCCTaGAGTAGCTTGGTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: RNVLQRRPRGSWVDRSCHFSSAA*SSLVSP
Trigger: TGGGGAGACCAAGCTACTTCAGGCAGCAGAGGAGAA...GTGGCAGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618327.4
CDS-3UTR TCA 90 bp TGCAGGGAGGAAAAGGCCGTGAGGATCCGCACCAGTTTGGGGAAAGCCTGGGGGGGGAGGAAAAGGCCGTaGGGATCCGCACCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: CREEKAVRIRTSLGKAWGGRKRP*GSAPVW
Trigger: CCAAACTGGTGCGGATCCTCACGGCCTTTTCCTCCC...CCCCCAGGCTTTCCCCAAACTGGTGCGGATCCTCACGGCCTTTTCCTCCCTGCA
62% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000618207.4
CDS-3UTR TCA 90 bp CAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGCGGGTGCCAGGATGCTaGGGCTCATGGGATACAGCC +
Preference number: 4 (lower is better)
Translates to: QCLLSARCALSRCLVGEQRVPGC*GSWDTA
Trigger: GGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCG...CTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp TACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCTCAGAGAACATGCCTGTCCAGGGCAGGGGCCAACCCTaGACCAGCAGGGGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: YPVQGPAWLVSSENMPVQGRGQP*TSRGRV
Trigger: CACCCGGCCCCTGCTGGTTCAGGGTTGGCCCCTGCC...CTGGACAGGCATGTTCTCTGAGGACACTAACCACGCTGGACCTTGAACTGGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp CTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTGGCAGGGGCCAACCCTaGACCAGCAGGGGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: LRLMGYSLEKSCVHKYPVGRGQP*TSRGRV
Trigger: CACCCGGCCCCTGCTGGTTCAGGGTTGGCCCCTGCC...AACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp CGCAGCAGCGGATCAGATCAGCTCTCAGGGCCCCGACACCCCCTGAGCACCTACGCCTGGCCACCACGGTaGAACCCCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: RSSGSDQLSGPRHPLSTYAWPPR*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCACCGTGGTGGCCAGGC...GTAGGTGCTCAGGGGGTGTCGGGGCCCTGAGAGCTGATCTGATCCGCTGCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp GCAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGAAGATCCAGTGGGGTTaGGAGAGTCTGCCCCAGTCG +
Preference number: 4 (lower is better)
Translates to: AGAGCQDAEAHGIQPGEEKIQWG*ESLPQS
Trigger: CGACTGGGGCAGACTCTCTCAACCCCACTGGATCTT...CTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp GTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGATGGGCTCAAGGATaGCCACAGGCCTTGGAGATC +
Preference number: 4 (lower is better)
Translates to: VAVRNVLQRRPRGSWVDRRWAQG*PQALEI
Trigger: GATCTCCAAGGCCTGTGGTCATCCTTGAGCCCATCT...GCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp TGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCACAGCTTCCCCAAGGATaGCTTCGGATGCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: WLSAMSFREGLGAPGWTAQLPQG*LRMPSS
Trigger: TGAGCTGGGCATCCGAAGGCATCCTTGGGGAAGCTG...TGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp GCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGCAGCTTCCCCAAGGATaGCTTCGGATGCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: ARCGSFRSRAGANPEPAGQLPQG*LRMPSS
Trigger: TGAGCTGGGCATCCGAAGGCATCCTTGGGGAAGCTG...CCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp TGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCACCAGTGCTTCAGGTCTaGCGGAAGCTCCTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: WLSAMSFREGLGAPGWTAPVLQV*RKLLWE
Trigger: TTCCCAGAGGAGCTTCCGGCAGACCTGAAGCACTGG...TGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp TGGAGCCGGGCCTGTGTCTGTCAGCAGAGCAAGATGTGGTTCATTCCGCAGCCGGGGCAGGTTCAGGCATaGTGGGCAGGTCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: WSRACVCQQSKMWFIPQPGQVQA*WAGQWL
Trigger: CAGCCACTGACCTGCCCAGCATGCCTGAACCTGCCC...CGGCTGCGGAATGAACCACATCTTGCTCTGCTGACAGACACAGGCCCGGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp GCCCAGCCTGTTGCAATCTGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTGGAGACCTCTCCAGCTaGCGGGCATTGGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: AQPVAIWGISRLGVAHQCGDLSS*RALGGG
Trigger: TCCCCCACCCAATGCCCGGCAGCTGGAGAGGTCTCC...ACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCAGATTGCAACAGGCTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp CATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGGATGCCATCCGGGCCTaGGGGCTCGGCACCATACGT +
Preference number: 4 (lower is better)
Translates to: HQCLLSARCALSRCLVGEDAIRA*GLGTIR
Trigger: ACGTATGGTGCCGAGCCCGCAGGCCCGGATGGCATC...CTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp TGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTCCACCTCCACTAGGATaGCATCCGGGCCTGCGGGCT +
Preference number: 4 (lower is better)
Translates to: WGISRLGVAHQCLLSARCPPPLG*HPGLRA
Trigger: AGCCCGCAGGCCCGGATGGCATCCTAGTGGAGGTGG...ACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp CGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTGCCACTGCAGGAAGCCATCTTaGGCTTCCAGCTCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: RNVLQRRPRGSWVDRSCHCRKPS*ASSSSK
Trigger: CTTCGAGGAGCTGGAAGCGCAAGATGGCTTCCTGCA...GTGGCAGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp CTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTGCAGGGCTCCGCCGGTaGCGGTCCGCACGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: LRLMGYSLEKSCVHKYPVAGLRR*RSARAV
Trigger: CACAGCACGTGCGGACCGGCACCGGCGGAGCCCTGC...AACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp CCGTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCAGGGCTCTGTCTTGGTaGTCTGTCATCCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: PWLSAMSFREGLGAPGWTRALSW*SVIPEL
Trigger: GAGCTCAGGGATGACAGAGCACCAAGACAGAGCCCT...GGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp AGGGCAGCTACAGCCAGACTAGCGCCTGGCTGGGACTGTCGGGGATGCGGTTTGGGCAAATGCCAGTGCTaGGGAGGTCCAGGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: RAATARLAPGWDCRGCGLGKCQC*GGPGRS
Trigger: ACTTCTCCCTGGACCTCCGCAGCACTGGCATTTGCC...CAAACCGCATCCCCGACAGTCCCAGCCAGGCGCTAGTCTGGCTGTAGCTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp GTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGGGTGGAGAAGTACTTGGTCTCCCCATGCTaGTGCAGGGACTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: VPGVPCQGVWSESRVEKYLVSPC*CRDSHS
Trigger: GCTGTGGGAGTCCCTGCAGCAGCATGGGGAGACCAA...GTACTTCTCCACCCTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp AGGGCAGCTACAGCCAGACTAGCGCCTGGCTGGGACTGTCGGGGATGCGGTTTGTCCAGGTCCAGATGCTaGAGGGAGGAAAAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: RAATARLAPGWDCRGCGLSRSRC*REEKAV
Trigger: CACGGCCTTTTCCTCCCTGCAGCATCTGGACCTGGA...CAAACCGCATCCCCGACAGTCCCAGCCAGGCGCTAGTCTGGCTGTAGCTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp AGCAGAGCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAAAGGTGGCTGAGAGCTaGGAGACACCCTCGTCCCCG +
Preference number: 4 (lower is better)
Translates to: SRARCGSFRSRAGANPEPKVAES*ETPSSP
Trigger: CGGGGACGAGGGTGTCTCGCAGCTCTCAGCCACCTT...TGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGCTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp CAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGAAGGTGGCTGAGAGCTaGGAGACACCCTCGTCCCCG +
Preference number: 4 (lower is better)
Translates to: QCLLSARCALSRCLVGEQKVAES*ETPSSP
Trigger: CGGGGACGAGGGTGTCTCGCAGCTCTCAGCCACCTT...CTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp ATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGAGGCTGGCAGCGAGCTaGTGGGCCCCGGCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: IQPGEELCPQVPSSRSSVRLAAS*WAPAAV
Trigger: CACGGCTGCCGGGGCCCAGCAGCTCGCTGCCAGCCT...CACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp CTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTAGGCTGGCAGCGAGCTaGTGGGCCCCGGCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: LRLMGYSLEKSCVHKYPVRLAAS*WAPAAV
Trigger: CACGGCTGCCGGGGCCCAGCAGCTCGCTGCCAGCCT...AACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp AGGGCAGCTACAGCCAGACTAGCGCCTGGCTGGGACTGTCGGGGATGCGGTTTGTCTGAGTGCCCGGTGTaGCCTGTCAAGGTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: RAATARLAPGWDCRGCGLSECPV*PVKVSG
Trigger: ACCAGACACCTTGACAGGGCACACCGGGCACTCAGA...CAAACCGCATCCCCGACAGTCCCAGCCAGGCGCTAGTCTGGCTGTAGCTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp GCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGTCTGAGTGCCCGGTGTaGCCTGTCAAGGTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: ARCGSFRSRAGANPEPAGSECPV*PVKVSG
Trigger: ACCAGACACCTTGACAGGGCACACCGGGCACTCAGA...CCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp GCCGTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACGCACCTGATACCCTTTaGAGCCAGTTCGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: AVAVRNVLQRRPRGSWVDAPDTL*SQFEAG
Trigger: TCCTGCCTCGAACTGGCTGCAAAGGGTATCAGGTGC...GTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCACGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp GGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCAGGGGTTGAGAGAGTCTaGCCCAGTCGGGCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: GCQDAEAHGIQPGEELCPGVERV*PSRAGV
Trigger: CACGCCAGCCCGACTGGGGCAGACTCTCTCAACCCC...TGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp CAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCGTCACCCAGGCTGGGTaGAGGGGCACAGTCATAGTT +
Preference number: 4 (lower is better)
Translates to: QGPGARMLRLMGYSLEKSVTQAG*RGTVIV
Trigger: AACTATGACTGTGCCCCTGCACCCAGCCTGGGTGAC...GCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp AGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCGAAAAGGGACGAACCTaGAGTGCCGAGTGGTTTCGG +
Preference number: 4 (lower is better)
Translates to: RCGSFRSRAGANPEPAGAEKGRT*SAEWFR
Trigger: CCGAAACCACTCGGCACTGCAGGTTCGTCCCTTTTC...GGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp GGAATCTGGTCGGTTTTCTCCAGGCGCATCTGGCCGGAGGCTGGCTCCTGGTTGTCAGCAACTGCTCTGTaGCAGGCAGTCCCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: GIWSVFSRRIWPEAGSWLSATAL*QAVPQS
Trigger: GGACTGGGGGACTGCCTGGCACAGAGCAGTTGCTGA...CAACCAGGAGCCAGCCTCCGGCCAGATGCGCCTGGAGAAAACCGACCAGATTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571186.5
CDS-3UTR CCA 90 bp CAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTGCAGCTCCCGGAGTCTaGCAGCCCCTCCTCGTGCCC +
Preference number: 4 (lower is better)
Translates to: QPGEELCPQVPSSRSSVVAAPGV*QPLLVP
Trigger: GGGCACGAGGAGGGGCTGCCAGACTCCGGGAGCTGC...AACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp TGGGCATGGGAACACGAGGTGCTACAGAGACACTGGCACCCGGCTAGGCACACAGGACCCAGCAGGGCGTaGAGCCAGGCAACGCATTGT +
Preference number: 4 (lower is better)
Translates to: WAWEHEVLQRHWHPARHTGPSRA*SQATHC
Trigger: ACAATGCGTTGCCTGGCTCCACGCCCTGCTGGGTCC...TGTGTGCCTAGCCGGGTGCCAGTGTCTCTGTAGCACCTCGTGTTCCCATGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp AGCAGAGCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGGACCCAGCAGGGCGTaGAGCCAGGCAACGCATTGT +
Preference number: 4 (lower is better)
Translates to: SRARCGSFRSRAGANPEPGPSRA*SQATHC
Trigger: ACAATGCGTTGCCTGGCTCCACGCCCTGCTGGGTCC...TGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGCTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GGAGAAAGGCATGGGAATCTGGTCGGTTTTCTCCAGGCGCATCTGGCCGGAGGCGGGGCCCCAACTCCATaGTGGCACACTGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GERHGNLVGFLQAHLAGGGAPTP*WHTVSC
Trigger: GCAGCTCACAGTGTGCCACCATGGAGTTGGGGCCCC...GCCTCCGGCCAGATGCGCCTGGAGAAAACCGACCAGATTCCCATGCCTTTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571186.5
CDS-3UTR CCA 90 bp TGGAGCCGGGCCTGTGTCTGTCAGCAGAGCAAGATGTGGTTCATTCCGCAGCCGGGGGCCCCAACTCCATaGTGGCACACTGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: WSRACVCQQSKMWFIPQPGAPTP*WHTVSC
Trigger: GCAGCTCACAGTGTGCCACCATGGAGTTGGGGCCCC...CGGCTGCGGAATGAACCACATCTTGCTCTGCTGACAGACACAGGCCCGGCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CTGGCCGGAGGCTGGCTCCTGGTTGAACAGCGCAGGCAGTGGCAGGCAGGGCAGTGGCATAAGCCTCCCTaGTCTCTTCATCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: LAGGWLLVEQRRQWQAGQWHKPP*SLHHLP
Trigger: TGGAAGGTGATGAAGAGACCAGGGAGGCTTATGCCA...CTGCCCTGCCTGCCACTGCCTGCGCTGTTCAACCAGGAGCCAGCCTCCGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571186.5
CDS-3UTR CCA 90 bp GCCCAGCCTGTTGCAATCTGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTGCAGGCAGGGCAGGGTaGAGCAGTCGCTCACTGGTC +
Preference number: 4 (lower is better)
Translates to: AQPVAIWGISRLGVAHQCAGRAG*SSRSLV
Trigger: GACCAGTGAGCGACTGCTCCACCCTGCCCTGCCTGC...ACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCAGATTGCAACAGGCTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GCCGTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACGATGTTGGGAGGCCGTaGACAGTGAATCCACTGGGA +
Preference number: 4 (lower is better)
Translates to: AVAVRNVLQRRPRGSWVDDVGRP*TVNPLG
Trigger: TCCCAGTGGATTCACTGTCCACGGCCTCCCAACATC...GTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCACGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp TGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTGGAGCCTGGCCGGTCTaGAGATGTTGGGAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: WGISRLGVAHQCLLSARCGAWPV*RCWEAV
Trigger: CACGGCCTCCCAACATCTCCAGACCGGCCAGGCTCC...ACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp TGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTCCAGCTGCCGGGCATTaGGTGGGGGACGTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: WGISRLGVAHQCLLSARCPAAGH*VGDVLC
Trigger: GCACAAGACGTCCCCCACCCAATGCCCGGCAGCTGG...ACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCCAGCTGCCGGGCATTaGGTGGGGGACGTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: HQCLLSARCALSRCLVGEPAAGH*VGDVLC
Trigger: GCACAAGACGTCCCCCACCCAATGCCCGGCAGCTGG...CTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCGGGTGGTCTCTTCAAGATGTaGCTGAAAACCTCATCGGCC +
Preference number: 4 (lower is better)
Translates to: VVHSAAGQGPTLNQQGPGGLFKM*LKTSSA
Trigger: GGCCGATGAGGTTTTCAGCCACATCTTGAAGAGACC...ACCCGGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR CCA 90 bp CTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTCGCATCACGTATGCCTaGGCCTGCTCCATGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LSAMSFREGLGAPGWTAARITYA*ACSMEK
Trigger: CTTCTCCATGGAGCAGGCCCAGGCATACGTGATGCG...AGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR CCA 90 bp ATTAGCTGTTTCCCTGCTAAGGGCTGGTGCATCTGGCCAGGCCTAGCTTTGGCTGCCTCCTCGGCCTCGTaGGCGCAGTGCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ISCFPAKGWCIWPGLALAASSAS*AQCSSS
Trigger: GGAGCTGCTGCACTGCGCCCACGAGGCCGAGGAGGC...AGCCAAAGCTAGGCCTGGCCAGATGCACCAGCCCTTAGCAGGGAAACAGCTAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR CCA 90 bp CGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTGCCACCTGCCTGAAGTAGCTTaGTCTCCCCATGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: RNVLQRRPRGSWVDRSCHLPEVA*SPHAAA
Trigger: TGCAGCAGCATGGGGAGACCAAGCTACTTCAGGCAG...GTGGCAGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618327.4
CDS-3UTR CCA 90 bp GCTTCCAGTCTGTTCCCCTCTCACCGCCCCATTAGTGTCCCATTAGCTGTTTCCCTGGCAGCGAGCTGCTaGGCCCCGGCAGCCGTGAAC +
Preference number: 4 (lower is better)
Translates to: ASSLFPSHRPISVPLAVSLAASC*APAAVN
Trigger: GTTCACGGCTGCCGGGGCCCAGCAGCTCGCTGCCAG...GGAAACAGCTAATGGGACACTAATGGGGCGGTGAGAGGGGAACAGACTGGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCGGGTGTTCAAGGTCCAGCGTaGTTAGTGTCCTCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: VVHSAAGQGPTLNQQGPGVQGPA*LVSSEN
Trigger: GTTCTCTGAGGACACTAACCACGCTGGACCTTGAAC...ACCCGGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCGGGTTCATGGGATACAGCCTaGAGAAGAGCTGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: VVHSAAGQGPTLNQQGPGSWDTA*RRAVST
Trigger: TGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGA...ACCCGGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTCTCGGGGCTCCTGGGTaGACCGCAGCTGCCACCAGG +
Preference number: 4 (lower is better)
Translates to: QPGEELCPQVPSSRSSVVLGAPG*TAAATR
Trigger: CCTGGTGGCAGCTGCGGTCCACCCAGGAGCCCCGAG...AACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGTCACTCCCTCTGGCCTaGCCGTGGCTGTCCGCAATG +
Preference number: 4 (lower is better)
Translates to: QCLLSARCALSRCLVGEQSLPLA*PWLSAM
Trigger: CATTGCGGACAGCCACGGCCAGGCCAGAGGGAGTGA...CTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CAGGCATCCACCCAACTGGGCGCTAAAGGAGCCTGGAGCCGGGCCTGTGTCTGTAAGGGCTGGTGCATCTaGCCAGGCCTAGCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: QASTQLGAKGAWSRACVCKGWCI*PGLALA
Trigger: AGCCAAAGCTAGGCCTGGCCAGATGCACCAGCCCTT...ACAGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GCAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGTTCCCTGCTAAGGGCTaGTGCATCTGGCCAGGCCTA +
Preference number: 4 (lower is better)
Translates to: AGAGCQDAEAHGIQPGEEFPAKG*CIWPGL
Trigger: TAGGCCTGGCCAGATGCACCAGCCCTTAGCAGGGAA...CTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CCGTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGATGGGGTTGGAGAATaGGGCAAGTCCCGAAGGATG +
Preference number: 4 (lower is better)
Translates to: PWLSAMSFREGLGAPGWTDGVGE*GKSRRM
Trigger: CATCCTTCGGGACTTGCCCCATTCTCCAACCCCATC...GGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp GAGCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGCCAGGGGTGCTACTaGCATTTAGTGGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: EQDVVHSAAGQGPTLNQQGQGCY*HLVAWS
Trigger: GCTCCAGGCCACTAAATGCCAGTAGCACCCCTGGCC...CTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp AGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCTTGTGGTCACAGGACTaGGAGAGGAGTGAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: RCGSFRSRAGANPEPAGALWSQD*ERSEVL
Trigger: GAGGACCTCACTCCTCTCCCAGTCCTGTGACCACAA...GGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp TGGGCATGGGAACACGAGGTGCTACAGAGACACTGGCACCCGGCTAGGCACACAAGCCAGACTAGCGCCTaGCTGGGACTGTCGGGGATG +
Preference number: 4 (lower is better)
Translates to: WAWEHEVLQRHWHPARHTSQTSA*LGLSGM
Trigger: CATCCCCGACAGTCCCAGCCAGGCGCTAGTCTGGCT...TGTGTGCCTAGCCGGGTGCCAGTGTCTCTGTAGCACCTCGTGTTCCCATGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp GTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCGGGTGGCAAGGGGCTTGGCTaGGTGGTTAAAAATAACTGC +
Preference number: 4 (lower is better)
Translates to: VVHSAAGQGPTLNQQGPGGKGLG*VVKNNC
Trigger: GCAGTTATTTTTAACCACCCAGCCAAGCCCCTTGCC...ACCCGGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp CGGTACCCGCCCCCTGGCGGCCGGAGCCAATCAGCGCGGGCGTTGAGCCGGCCACAGTTGGACATATTTTaGTTTAAATCCCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: RYPPPGGRSQSARALSRPQLDIF*FKSQLH
Trigger: GTGGAGCTGGGATTTAAACCAAAATATGTCCAACTG...TGGCCGGCTCAACGCCCGCGCTGATTGGCTCCGGCCGCCAGGGGGCGGGTACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644232.1
CDS-3UTR CCA 90 bp TCCCAGCTCCACCAACACCTCAGACTTCATCTCCTAAGCCTCGGTTTCCTTCTCGCGGTACCCGCCCCCTaGCGGCCGGAGCCAATCAGC +
Preference number: 4 (lower is better)
Translates to: SQLHQHLRLHLLSLGFLLAVPAP*RPEPIS
Trigger: GCTGATTGGCTCCGGCCGCCAGGGGGCGGGTACCGC...GAGAAGGAAACCGAGGCTTAGGAGATGAAGTCTGAGGTGTTGGTGGAGCTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644232.1
CDS-3UTR TCA 90 bp AGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTCCTGTAGGGTACTTTaGTGTCTGCGGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RLGVAHQCLLSARCALSRSCRVL*CLRPSS
Trigger: GGAGCTGGGCCGCAGACATCAAAGTACCCTACAGGA...CCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR TCA 90 bp CATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGGGGCCCCGGCAGCCGTaGACTTGTTGTACTGGACGT +
Preference number: 4 (lower is better)
Translates to: HQCLLSARCALSRCLVGEGPRQP*TCCTGR
Trigger: ACGTCCAGTACAACAAGTTCACGGCTGCCGGGGCCC...CTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp GCCCAGCCTGTTGCAATCTGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTGCCAGCGTCTCCACATaGGGACACCTCCGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: AQPVAIWGISRLGVAHQCASVST*GHLRRL
Trigger: CAGCCTTCGGAGGTGTCCTCATGTGGAGACGCTGGC...ACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCAGATTGCAACAGGCTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp GTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCGGGTAAAATTAGCCAGACATaGTGGTGGGTGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: VVHSAAGQGPTLNQQGPGKISQT*WWVPVV
Trigger: GACTACAGGCACCCACCATCATGTCTGGCTAATTTT...ACCCGGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp GCAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGTGCACTATCATGCCCTaGTTCCTCCGAGCAGCGCTT +
Preference number: 4 (lower is better)
Translates to: AGAGCQDAEAHGIQPGEECTIMP*FLRAAL
Trigger: AAGCGCTGCTCGGAGGAATCAGGGCATGATAGTGCA...CTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp GGGGTCCTAGCCAACTATTCCGTAGTGGCACTGAGGCCCCCAGCCAACAGCCAGTACAGGCGAGGAGACTaGGGTGTGGGAGAGTACAGG +
Preference number: 4 (lower is better)
Translates to: GVLANYSVVALRPPANSQYRRGD*GVGEYR
Trigger: CCTGTACTCTCCCACACCTCAGTCTCCTCGCCTGTA...CTGGCTGTTGGCTGGGGGCCTCAGTGCCACTACGGAATAGTTGGCTAGGACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp GCAGACCCGAACCAGGAAAGCAACTCAGACGCTAGGGCCCCGAGGGGCGGAGCGGGTGGATCTCCACCATaGAAATTGGCGCTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: ADPNQESNSDARAPRGGAGGSPP*KLALWE
Trigger: TTCCCAAAGCGCCAATTTTCATGGTGGAGATCCACC...CGCTCCGCCCCTCGGGGCCCTAGCGTCTGAGTTGCTTTCCTGGTTCGGGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644232.1
CDS-3UTR GCA 90 bp AGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGCAGCTTCCCCAAGGATaGCTTCGGATGCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: RLGVAHQCLLSARCALSRQLPQG*LRMPSS
Trigger: TGAGCTGGGCATCCGAAGGCATCCTTGGGGAAGCTG...CCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp TGTCTGGTCGGAGAGCAGGGTGGAGAAGTACTTTCTCTGTGGCCCGGTGCAGTGGGGCAGGTTCAGGCATaGTGGGCAGGTCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: CLVGEQGGEVLSLWPGAVGQVQA*WAGQWL
Trigger: CAGCCACTGACCTGCCCAGCATGCCTGAACCTGCCC...CACTGCACCGGGCCACAGAGAAAGTACTTCTCCACCCTGCTCTCCGACCAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp GCCCAGCCTGTTGCAATCTGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTGGGCAGGTTCAGGCATaGTGGGCAGGTCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: AQPVAIWGISRLGVAHQCGQVQA*WAGQWL
Trigger: CAGCCACTGACCTGCCCAGCATGCCTGAACCTGCCC...ACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCAGATTGCAACAGGCTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp GTGACCAGCTGGAGGCACGTGGTAGACCAGGCATCTTCACAAAGCCCGCTGCTGCTCTCCAGCCTGGCCTaGACCAGATCCACCTCCACT +
Preference number: 4 (lower is better)
Translates to: VTSWRHVVDQASSQSPLLLSSLA*TRSTST
Trigger: AGTGGAGGTGGATCTGGTGCAGGCCAGGCTGGAGAG...CAGCAGCGGGCTTTGTGAAGATGCCTGGTCTACCACGTGCCTCCAGCTGGTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp CATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCCAGGCCCGGCTCACTaGCCCAGCCCAATAGCTCTT +
Preference number: 4 (lower is better)
Translates to: HQCLLSARCALSRCLVGEPGPAH*PSPIAL
Trigger: AAGAGCTATTGGGCTGGGGCAGTGAGCCGGGCCTGG...CTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp AGCAGAGCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGGTCCGCACGTGCTGTaGAGGAAGCCATCTTGCGCT +
Preference number: 4 (lower is better)
Translates to: SRARCGSFRSRAGANPEPGPHVL*RKPSCA
Trigger: AGCGCAAGATGGCTTCCTGCACAGCACGTGCGGACC...TGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp CAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCAGGGCTCTGTCTTGGTaGTCTGTCATCCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: QGPGARMLRLMGYSLEKSRALSW*SVIPEL
Trigger: GAGCTCAGGGATGACAGAGCACCAAGACAGAGCCCT...GCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp TGGAGCCGGGCCTGTGTCTGTCAGCAGAGCAAGATGTGGTTCATTCCGCAGCCGAGGGGCAAATGCCAGTaGTGCGGAGGTCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: WSRACVCQQSKMWFIPQPRGKCQ*CGGPGR
Trigger: TCTCCCTGGACCTCCGCAGCACTGGCATTTGCCCCT...CGGCTGCGGAATGAACCACATCTTGCTCTGCTGACAGACACAGGCCCGGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp GAGCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGCATCCAGGTCCAGATaGTGCAGGGAGGAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: EQDVVHSAAGQGPTLNQQASRSR*CREEKA
Trigger: GGCCTTTTCCTCCCTGCAGCATCTGGACCTGGATGC...CTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp CCCAGCCTGTTGCAATCTGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCTGGGTGGACCGCAGCTaGCACCAGGCATCCACCCAA +
Preference number: 4 (lower is better)
Translates to: PSLLQSGELAGWGLPISVWVDRS*HQASTQ
Trigger: TTGGGTGGATGCCTGGTGGCAGCTGCGGTCCACCCA...GACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCAGATTGCAACAGGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp CCCAGCCTGTTGCAATCTGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCCCCAGATCGCACCACTaGACGCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: PSLLQSGELAGWGLPISVPRSHH*TPAWAT
Trigger: TGTTGCCCAGGCTGGCGTGCAGTGGTGCGATCTGGG...GACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCAGATTGCAACAGGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp AGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCGACATTAGCTCTGCCTaGACTTACAGCCTGAGGACC +
Preference number: 4 (lower is better)
Translates to: RCGSFRSRAGANPEPAGADISSA*TYSLRT
Trigger: GGTCCTCAGGCTGTAAGTGCAGGCAGAGCTAATGTC...GGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp GCCCAGCCTGTTGCAATCTGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTTGGTGCCCTCACAGCTaGCATCCCAGGCCCCAAGCT +
Preference number: 4 (lower is better)
Translates to: AQPVAIWGISRLGVAHQCWCPHS*HPRPQA
Trigger: AGCTTGGGGCCTGGGATGGCAGCTGTGAGGGCACCA...ACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCAGATTGCAACAGGCTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp AGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCCCAGTTCCGCGATATTaGCATAAGCCTCCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: RCGSFRSRAGANPEPAGAPVPRY*HKPPWS
Trigger: AGACCAGGGAGGCTTATGCCAATATCGCGGAACTGG...GGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CCGTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCTGCCGGAAGCTCCTCTaGGAAGGGTCTTTTCTGACT +
Preference number: 4 (lower is better)
Translates to: PWLSAMSFREGLGAPGWTCRKLL*EGSFLT
Trigger: AGTCAGAAAAGACCCTTCCCAGAGGAGCTTCCGGCA...GGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp TGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTGAGGGGGTACTTGGCTaGCCTGGGGCACCTCACCAT +
Preference number: 4 (lower is better)
Translates to: WGISRLGVAHQCLLSARCEGVLG*PGAPHH
Trigger: ATGGTGAGGTGCCCCAGGCCAGCCAAGTACCCCCTC...ACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp TGCGAGACACCCTCGTCCCCGATCTTGTTCTCACTCAGCGCATCCAGGTCCAGAGAGGGGGTACTTGGCTaGCCTGGGGCACCTCACCAT +
Preference number: 4 (lower is better)
Translates to: CETPSSPILFSLSASRSREGVLG*PGAPHH
Trigger: ATGGTGAGGTGCCCCAGGCCAGCCAAGTACCCCCTC...TCTGGACCTGGATGCGCTGAGTGAGAACAAGATCGGGGACGAGGGTGTCTCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000618207.4
CDS-3UTR CCA 90 bp GCACACGAGCCAAGCTCTCGGCTCCCACGTCGCAGATGCAGTTATTGTACAAGCATGGAGCGAAGGGGCTaGTGGAGCCTGGCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: AHEPSSRLPRRRCSYCTSMERRG*WSLAGL
Trigger: CAGACCGGCCAGGCTCCACCAGCCCCTTCGCTCCAT...GCTTGTACAATAACTGCATCTGCGACGTGGGAGCCGAGAGCTTGGCTCGTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618207.4
CDS-3UTR CCA 90 bp GTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCCGGCTCAGGCCATTTTaGAAGCTTGTTGGAGACCTC +
Preference number: 4 (lower is better)
Translates to: VAVRNVLQRRPRGSWVDRRLRPF*KLVGDL
Trigger: GAGGTCTCCAACAAGCTTCCAAAATGGCCTGAGCCG...GCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR CCA 90 bp TGGAGCCGGGCCTGTGTCTGTCAGCAGAGCAAGATGTGGTTCATTCCGCAGCCGCCTGGGCCTGCTCCATaGAGAAGCCGGACAGCTCAA +
Preference number: 4 (lower is better)
Translates to: WSRACVCQQSKMWFIPQPPGPAP*RSRTAQ
Trigger: TTGAGCTGTCCGGCTTCTCCATGGAGCAGGCCCAGG...CGGCTGCGGAATGAACCACATCTTGCTCTGCTGACAGACACAGGCCCGGCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR CCA 90 bp GAGCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGCGCATCACGTATGCCTaGGCCTGCTCCATGGAGAAG +
Preference number: 4 (lower is better)
Translates to: EQDVVHSAAGQGPTLNQQRITYA*ACSMEK
Trigger: CTTCTCCATGGAGCAGGCCCAGGCATACGTGATGCG...CTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR CCA 90 bp GCAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGGTCAGGGCTCTGTCTTaGTGCTCTGTCATCCCTGAG +
Preference number: 4 (lower is better)
Translates to: AGAGCQDAEAHGIQPGEEVRALS*CSVIPE
Trigger: CTCAGGGATGACAGAGCACCAAGACAGAGCCCTGAC...CTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR CCA 90 bp CTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTGTTGGACTAAGCCTTTaGCCATCGCCCAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LSAMSFREGLGAPGWTAAVGLSL*PSPRSS
Trigger: TGAGGACCTGGGCGATGGCCAAAGGCTTAGTCCAAC...AGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR CCA 90 bp AGCAGAGCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCATCAGCTGGGGGAAGGTaGCTGAGAGCTGCGAGACAC +
Preference number: 4 (lower is better)
Translates to: SRARCGSFRSRAGANPEPSAGGR*LRAARH
Trigger: GTGTCTCGCAGCTCTCAGCCACCTTCCCCCAGCTGA...TGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGCTCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp TGTTCCTTAACTCTAGGATGCAGGTTCCGTAGTGGGCGGACCTTCCAGCAACCACTGGCAGCGAGCTGCTaGGCCCCGGCAGCCGTGAAC +
Preference number: 4 (lower is better)
Translates to: CSLTLGCRFRSGRTFQQPLAASC*APAAVN
Trigger: GTTCACGGCTGCCGGGGCCCAGCAGCTCGCTGCCAG...TGGTTGCTGGAAGGTCCGCCCACTACGGAACCTGCATCCTAGAGTTAAGGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644232.1
CDS-3UTR CCA 90 bp TACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGGACACCTCCGAAGGCTaGCAGCGAGCTGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: YSLEKSCVHKYPVQGPAWDTSEG*QRAAGP
Trigger: GGGCCCAGCAGCTCGCTGCCAGCCTTCGGAGGTGTC...CCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CGCAGCAGCGGATCAGATCAGCTCTCAGGGCCCCGACACCCCCTGAGCACCTACTTCCTGGACACTGAATaGGATGGTGGGCGTCCACAT +
Preference number: 4 (lower is better)
Translates to: RSSGSDQLSGPRHPLSTYFLDTE*DGGRPH
Trigger: ATGTGGACGCCCACCATCCCATTCAGTGTCCAGGAA...GTAGGTGCTCAGGGGGTGTCGGGGCCCTGAGAGCTGATCTGATCCGCTGCTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp TCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGGGTGGAGGCATCCACCCAACTaGGCGCTAAAGGAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SSECPVCPVKVSGRRAGWRHPPN*ALKEPG
Trigger: TCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCT...CCACCCTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp AGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCGGTCGGAGAGCAGGGTaGAGAAGTACTTTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: RCGSFRSRAGANPEPAGAGRRAG*RSTFSV
Trigger: CACAGAGAAAGTACTTCTCCACCCTGCTCTCCGACC...GGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GAGCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGGAATTAGCAGGCTaGGGGTTGCCCATCAGTGTC +
Preference number: 4 (lower is better)
Translates to: EQDVVHSAAGQGPTLNQQGELAG*GLPISV
Trigger: GACACTGATGGGCAACCCCCAGCCTGCTAATTCCCC...CTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGGGTGGAGAAGTACCCAGCTCTCACTTGCTaGGGAGAGGAGCAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: VPGVPCQGVWSESRVEKYPALTC*GEEQSL
Trigger: CAAGCTCTGCTCCTCTCCCCAGCAAGTGAGAGCTGG...GTACTTCTCCACCCTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp TGGAGCCGGGCCTGTGTCTGTCAGCAGAGCAAGATGTGGTTCATTCCGCAGCCGACACAGGCGCCTTGCTaGGTACAGAGGGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: WSRACVCQQSKMWFIPQPTQAPC*VQRAQQ
Trigger: CTGCTGTGCCCTCTGTACCCAGCAAGGCGCCTGTGT...CGGCTGCGGAATGAACCACATCTTGCTCTGCTGACAGACACAGGCCCGGCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp GAGCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGAGGAGACTGAGGTGTaGGAGAGTACAGGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: EQDVVHSAAGQGPTLNQQEETEV*ESTGGR
Trigger: TCTGCCGCCTGTACTCTCCCACACCTCAGTCTCCTC...CTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp CAGGCATCCACCCAACTGGGCGCTAAAGGAGCCTGGAGCCGGGCCTGTGTCTGTAACCTGGTGGCAGGGTaGGGCTTCCGTGCTAATAAC +
Preference number: 4 (lower is better)
Translates to: QASTQLGAKGAWSRACVCNLVAG*GFRANN
Trigger: GTTATTAGCACGGAAGCCCCACCCTGCCACCAGGTT...ACAGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp TGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTCAGCGCTGGCTCAGCTaGCCCAGAGCTGCAAGTCAG +
Preference number: 4 (lower is better)
Translates to: WGISRLGVAHQCLLSARCQRWLS*PRAASQ
Trigger: CTGACTTGCAGCTCTGGGCCAGCTGAGCCAGCGCTG...ACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp TCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGGGTGGGTGCTACAGAGACACTaGCACCCGGCTAGGCACACA +
Preference number: 4 (lower is better)
Translates to: SSECPVCPVKVSGRRAGWVLQRH*HPARHT
Trigger: TGTGTGCCTAGCCGGGTGCCAGTGTCTCTGTAGCAC...CCACCCTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp AGCAGAGCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCACTCTGTCACCCAGGCTaGGTGCAGGGGCACAGTCAT +
Preference number: 4 (lower is better)
Translates to: SRARCGSFRSRAGANPEPLCHPG*VQGHSH
Trigger: ATGACTGTGCCCCTGCACCCAGCCTGGGTGACAGAG...TGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp CAGGCATCCACCCAACTGGGCGCTAAAGGAGCCTGGAGCCGGGCCTGTGTCTGTCTTTCCTCAGGGACATaGACCTGTGCAGAGACAGGC +
Preference number: 4 (lower is better)
Translates to: QASTQLGAKGAWSRACVCLSSGT*TCAETG
Trigger: GCCTGTCTCTGCACAGGTCCATGTCCCTGAGGAAAG...ACAGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp CTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTAAGGGCGGTGATAATTaGTACCCAGCGAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LSAMSFREGLGAPGWTAAKGGDN*YPASPQ
Trigger: CTGGGGACTCGCTGGGTACCAATTATCACCGCCCTT...AGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp CCGTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCACTGGAGAAAGGCACTaGCTTCCAGTGCTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: PWLSAMSFREGLGAPGWTTGERH*LPVLQV
Trigger: GACCTGAAGCACTGGAAGCCAGTGCCTTTCTCCAGT...GGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381835.9
3UTR CAA 72 bp GTGGCTGAGAGCTGCGAGACACCCTCGTCCCCGATCTaGTTCTCACTCAGCGCATCCAGGTCCAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: VAESCETPSSPI*FSLSASRSRCC
Trigger: GCAGCATCTGGACCTGGATGCGCTGAGTGAGAACAAGATCGGGGACGAGGGTGTCTCGCAGCTCTCAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618207.4
CDS-3UTR TCA 90 bp GGTCCCTCAGGGAGATTCAGGCAGCTCAACGAGGAACTGGAGAAAGGCATGGGAAGGCTGGCTCCTGGTTaGACAGCGCAGGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: GPSGRFRQLNEELEKGMGRLAPG*TAQAVA
Trigger: TGCCACTGCCTGCGCTGTTCAACCAGGAGCCAGCCT...TCCCATGCCTTTCTCCAGTTCCTCGTTGAGCTGCCTGAATCTCCCTGAGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571186.5
CDS-3UTR TCA 90 bp GTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGGGTGGAGAAGTACGGAGCTCCTTGTCCTTaGTTTCGCCACTCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: VPGVPCQGVWSESRVEKYGAPCP*FRHSEP
Trigger: TGGCTCTGAGTGGCGAAATCAAGGACAAGGAGCTCC...GTACTTCTCCACCCTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR TCA 90 bp ACCAGGCATCCACCCAACTGGGCGCTAAAGGAGCCTGGAGCCGGGCCTGTGTCTGAACTTCTCGTCCTCTaGGTCTGCACAAGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: TRHPPNWALKEPGAGPVSELLVL*VCTSFP
Trigger: GGGAAAGCTTGTGCAGACTCAGAGGACGAGAAGTTC...AGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618327.4
CDS-3UTR TCA 90 bp GCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGTCTCAGGCTGATCCGTaGATCCTGTTGTTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: ARCGSFRSRAGANPEPAGSQADP*ILLLQV
Trigger: CACCTGCAACAACAGGATTCACGGATCAGCCTGAGA...CCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp AACCAGGAAAGCAACTCAGACGCTAGGGCCCCGAGGGGCGGAGCGAAGCGGTACTCTCAGGCTGATCCGTaGATCCTGTTGTTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: NQESNSDARAPRGGAKRYSQADP*ILLLQV
Trigger: CACCTGCAACAACAGGATTCACGGATCAGCCTGAGA...GTACCGCTTCGCTCCGCCCCTCGGGGCCCTAGCGTCTGAGTTGCTTTCCTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644232.1
CDS-3UTR TCA 90 bp GTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCGGGATCATCTCAGGCTaGTCCGTGAATCCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: VAVRNVLQRRPRGSWVDRGIISG*SVNPVV
Trigger: AACAACAGGATTCACGGATCAGCCTGAGATGATCCC...GCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp CAGGCATCCACCCAACTGGGCGCTAAAGGAGCCTGGAGCCGGGCCTGTGTCTGTCTGAGGTCAAGAGTTTaGGACCAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: QASTQLGAKGAWSRACVCLRSRV*DQPGQH
Trigger: ATGTTGGCCAGGCTGGTCTCAAACTCTTGACCTCAG...ACAGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp GCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGAAAAGCAGCTGCCACTaGAGCCCAGCCTGTTGCAAT +
Preference number: 4 (lower is better)
Translates to: ARCGSFRSRAGANPEPAGKSSCH*SPACCN
Trigger: ATTGCAACAGGCTGGGCTTCAGTGGCAGCTGCTTTT...CCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp GCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGTCAGAAAAGAGGACTTaGGCCAAGGTGGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: ARCGSFRSRAGANPEPAGSEKRT*AKVGSG
Trigger: ACCAGAGCCCACCTTGGCTCAAGTCCTCTTTTCTGA...CCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp GTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGGGTGGAGAAGTACCTGGATGGCAGCACCTaGTACCCTTTGCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: VPGVPCQGVWSESRVEKYLDGST*YPLQPV
Trigger: AACTGGCTGCAAAGGGTATCAGGTGCTGCCATCCAG...GTACTTCTCCACCCTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp GTGACCAGCTGGAGGCACGTGGTAGACCAGGCATCTTCACAAAGCCCGCTGCTGCCCCAGGGAAAAAGGTaGGCGTCAGGAGGGAGACAT +
Preference number: 4 (lower is better)
Translates to: VTSWRHVVDQASSQSPLLPQGKR*ASGGRH
Trigger: ATGTCTCCCTCCTGACGCTCACCTTTTTCCCTGGGG...CAGCAGCGGGCTTTGTGAAGATGCCTGGTCTACCACGTGCCTCCAGCTGGTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp GCAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGTGGAGATCTCTGCAGTaGGCATCTGTGCGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: AGAGCQDAEAHGIQPGEEWRSLQ*ASVRLN
Trigger: ATTCAGCCGCACAGATGCTCACTGCAGAGATCTCCA...CTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp CAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGGGACTGGGAGAGGAGTaGGGTCCTCACCGAGTGATT +
Preference number: 4 (lower is better)
Translates to: QCLLSARCALSRCLVGEQGLGEE*GPHRVI
Trigger: AATCACTCGGTGAGGACCTCACTCCTCTCCCAGTCC...CTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp ACCAGGCATCCACCCAACTGGGCGCTAAAGGAGCCTGGAGCCGGGCCTGTGTCTACTCCTGATCTCAACTaGTCCACCCACCTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: TRHPPNWALKEPGAGPVSTPDLN*STHLSL
Trigger: GAGGCTAAGGTGGGTGGATCAGTTGAGATCAGGAGT...AGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp GTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCTCTCTGAGCTCCATGTaGAATGCAGGGATGATGGTC +
Preference number: 4 (lower is better)
Translates to: VAVRNVLQRRPRGSWVDRSLSSM*NAGMMV
Trigger: GACCATCATCCCTGCATTTCACATGGAGCTCAGAGA...GCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp CAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCCAGGAGGCTGAGGCATaGGAATTGCTTGAACCTGGA +
Preference number: 4 (lower is better)
Translates to: QGPGARMLRLMGYSLEKSQEAEA*ELLEPG
Trigger: TCCAGGTTCAAGCAATTCTCATGCCTCAGCCTCCTG...GCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp GTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGGGTGGAGAAGTACAGCTCAGGACGGCTTTaGCTGTGGCCCAACACAGAT +
Preference number: 4 (lower is better)
Translates to: VPGVPCQGVWSESRVEKYSSGRL*LWPNTD
Trigger: ATCTGTGTTGGGCCACAGTCAAAGCCGTCCTGAGCT...GTACTTCTCCACCCTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp TCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGGGTGGGTGAGTAGGGGAGGGTaGCGTCTGTCTTTAGCCACT +
Preference number: 4 (lower is better)
Translates to: SSECPVCPVKVSGRRAGWVSRGG*RLSLAT
Trigger: AGTGGCTAAAGACAGACGTCACCCTCCCCTACTCAC...CCACCCTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp GGAGAGGGAGGAATTCCCAGGCCGGATACACACCCCTCCCTCAGGCTTCTCCTCGCTCCCAAATCCATTTaGGGCAGAGCTGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GEGGIPRPDTHPSLRLLLAPKSI*GRAVSS
Trigger: GGAGCTGACAGCTCTGCCTCAAATGGATTTGGGAGC...GAGGAGAAGCCTGAGGGAGGGGTGTGTATCCGGCCTGGGAATTCCTCCCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644232.1
CDS-3UTR GCA 90 bp TTTCTCCAGGCGCATCTGGCCGGAGGCTGGCTCCTGGTTGAACAGCGCAGGCAGAAGGATGCCTTCGGATaGCCAGCTCAGAAGCACACA +
Preference number: 4 (lower is better)
Translates to: FLQAHLAGGWLLVEQRRQKDAFG*PAQKHT
Trigger: TGTGTGCTTCTGAGCTGGGCATCCGAAGGCATCCTT...CTGCCTGCGCTGTTCAACCAGGAGCCAGCCTCCGGCCAGATGCGCCTGGAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571186.5
CDS-3UTR GCA 90 bp CAGGCATCCACCCAACTGGGCGCTAAAGGAGCCTGGAGCCGGGCCTGTGTCTGTAAGGATGCCTTCGGATaGCCAGCTCAGAAGCACACA +
Preference number: 4 (lower is better)
Translates to: QASTQLGAKGAWSRACVCKDAFG*PAQKHT
Trigger: TGTGTGCTTCTGAGCTGGGCATCCGAAGGCATCCTT...ACAGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp TACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGGGAGACCTCTCCAGCTaGCGGGCATTGGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: YSLEKSCVHKYPVQGPAWGDLSS*RALGGG
Trigger: TCCCCCACCCAATGCCCGGCAGCTGGAGAGGTCTCC...CCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp CTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTTCACGCGGCCGCCGGTaGTCCTTGGCAGCCAACAGC +
Preference number: 4 (lower is better)
Translates to: LRLMGYSLEKSCVHKYPVSRGRR*SLAANS
Trigger: GCTGTTGGCTGCCAAGGAGCACCGGCGGCCGCGTGA...AACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp CCCAGCCTGTTGCAATCTGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCGGTCCGCACGTGCTGTaGAGGAAGCCATCTTGCGCT +
Preference number: 4 (lower is better)
Translates to: PSLLQSGELAGWGLPISVGPHVL*RKPSCA
Trigger: AGCGCAAGATGGCTTCCTGCACAGCACGTGCGGACC...GACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCAGATTGCAACAGGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp CATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGGTGCCGGTCCGCACGTaGTGTGCAGGAAGCCATCTT +
Preference number: 4 (lower is better)
Translates to: HQCLLSARCALSRCLVGEVPVRT*CAGSHL
Trigger: AAGATGGCTTCCTGCACAGCACGTGCGGACCGGCAC...CTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp GGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCAACGTATGCCTGGGCCTaGTCCATGGAGAAGCCGGAC +
Preference number: 4 (lower is better)
Translates to: GCQDAEAHGIQPGEELCPTYAWA*SMEKPD
Trigger: GTCCGGCTTCTCCATGGAGCAGGCCCAGGCATACGT...TGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp CCCAGCCTGTTGCAATCTGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCGGGTACTTTGATGTCTaGGGCCCAGCTCCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: PSLLQSGELAGWGLPISVGYFDV*GPAPRP
Trigger: TGGCCTGGGAGCTGGGCCGCAGACATCAAAGTACCC...GACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCAGATTGCAACAGGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp GAGCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGTCCTGTACCACGTGCTaGCAAATTCCAGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: EQDVVHSAAGQGPTLNQQSCTTC*QIPASS
Trigger: CGAGGAGGCTGGAATTTGGCAGCACGTGGTACAGGA...CTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp AGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGAGCTCCTGTACCACGTaGTGCCAAATTCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: RLGVAHQCLLSARCALSRSSCTT*CQIPAS
Trigger: GGAGGCTGGAATTTGGCAGCACGTGGTACAGGAGCT...CCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp TGTCTGGTCGGAGAGCAGGGTGGAGAAGTACTTTCTCTGTGGCCCGGTGCAGTGAGGGGCAAATGCCAGTaGTGCGGAGGTCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: CLVGEQGGEVLSLWPGAVRGKCQ*CGGPGR
Trigger: TCTCCCTGGACCTCCGCAGCACTGGCATTTGCCCCT...CACTGCACCGGGCCACAGAGAAAGTACTTCTCCACCCTGCTCTCCGACCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp CGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTGCCACCGTGAATCCTGTTGTTaGAGGTGTTCCTGGACACTG +
Preference number: 4 (lower is better)
Translates to: RNVLQRRPRGSWVDRSCHRESCC*RCSWTL
Trigger: CAGTGTCCAGGAACACCTGCAACAACAGGATTCACG...GTGGCAGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp AGGGCAGCTACAGCCAGACTAGCGCCTGGCTGGGACTGTCGGGGATGCGGTTTGGAGGCAGGAGGTGCTTaGCTGTCTGCAAAGATCATC +
Preference number: 4 (lower is better)
Translates to: RAATARLAPGWDCRGCGLEAGGA*LSAKII
Trigger: GATGATCTTTGCAGACAGGCAAGCACCTCCTGCCTC...CAAACCGCATCCCCGACAGTCCCAGCCAGGCGCTAGTCTGGCTGTAGCTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp AGCAGAGCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCACAAGGTGGAAGGTGTTaGCAAGCCCTGCCCACTACC +
Preference number: 4 (lower is better)
Translates to: SRARCGSFRSRAGANPEPQGGRC*QALPTT
Trigger: GGTAGTGGGCAGGGCTTGGCAACACCTTCCACCTTG...TGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGCTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp TCCCAGCTCCACCAACACCTCAGACTTCATCTCCTAAGCCTCGGTTTCCTTCTCTGGGAAACGGGGACGTaGCAGGGGGCCAGGCCATGG +
Preference number: 4 (lower is better)
Translates to: SQLHQHLRLHLLSLGFLLWETGT*QGARPW
Trigger: CCATGGCCTGGCCCCCTGGCACGTCCCCGTTTCCCA...GAGAAGGAAACCGAGGCTTAGGAGATGAAGTCTGAGGTGTTGGTGGAGCTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp AGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTACCCAGTGAGGTGGTCTaGTGGAGGCGTCCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: SLEKSCVHKYPVQGPAWLPSEVV*WRRPRA
Trigger: CGCCCTGGGACGCCTCCAGCAGACCACCTCACTGGG...TAACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp AGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGCACATCTCCATCACCTaGCCCAAGCATCACCCTGTG +
Preference number: 4 (lower is better)
Translates to: RLGVAHQCLLSARCALSRHISIT*PKHHPV
Trigger: CACAGGGTGATGCTTGGGGCAGGTGATGGAGATGTG...CCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp GTGACCAGCTGGAGGCACGTGGTAGACCAGGCATCTTCACAAAGCCCGCTGCTGGCCCCAACTCCATGGTaGCACACTGTGAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: VTSWRHVVDQASSQSPLLAPTPW*HTVSCL
Trigger: AAGGCAGCTCACAGTGTGCCACCATGGAGTTGGGGC...CAGCAGCGGGCTTTGTGAAGATGCCTGGTCTACCACGTGCCTCCAGCTGGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp GCTGTGAGGAAGTGGGCTGTGTTAGAGACTGGGTGCTTGGAGGGGCCTTCCTGGGCCCCAACTCCATGGTaGCACACTGTGAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: AVRKWAVLETGCLEGPSWAPTPW*HTVSCL
Trigger: AAGGCAGCTCACAGTGTGCCACCATGGAGTTGGGGC...CCAGGAAGGCCCCTCCAAGCACCCAGTCTCTAACACAGCCCACTTCCTCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571186.5
CDS-3UTR CCA 90 bp AGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCAACAGCCTGCTGAACTaGTCGCAGTTGATGGTGTCT +
Preference number: 4 (lower is better)
Translates to: RCGSFRSRAGANPEPAGANSLLN*SQLMVS
Trigger: AGACACCATCAACTGCGACCAGTTCAGCAGGCTGTT...GGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp AGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCTGGCATAAGCCTCCCTaGTCTCTTCATCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: RCGSFRSRAGANPEPAGAWHKPP*SLHHLP
Trigger: TGGAAGGTGATGAAGAGACCAGGGAGGCTTATGCCA...GGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp AGGGCAGCTACAGCCAGACTAGCGCCTGGCTGGGACTGTCGGGGATGCGGTTTGCCAGTTCCGCGATATTaGCATAAGCCTCCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: RAATARLAPGWDCRGCGLPVPRY*HKPPWS
Trigger: AGACCAGGGAGGCTTATGCCAATATCGCGGAACTGG...CAAACCGCATCCCCGACAGTCCCAGCCAGGCGCTAGTCTGGCTGTAGCTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp GATGGGTCCCTCAGGGAGATTCAGGCAGCTCAACGAGGAACTGGAGAAAGGCATGAACAGCGCAGGCAGTaGCAGGCAGGGCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: DGSLREIQAAQRGTGERHEQRRQ*QAGQGG
Trigger: TCCACCCTGCCCTGCCTGCCACTGCCTGCGCTGTTC...ATGCCTTTCTCCAGTTCCTCGTTGAGCTGCCTGAATCTCCCTGAGGGACCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571186.5
CDS-3UTR CCA 90 bp GCTTCCAGTCTGTTCCCCTCTCACCGCCCCATTAGTGTCCCATTAGCTGTTTCCGAACAGCGCAGGCAGTaGCAGGCAGGGCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: ASSLFPSHRPISVPLAVSEQRRQ*QAGQGG
Trigger: TCCACCCTGCCCTGCCTGCCACTGCCTGCGCTGTTC...GGAAACAGCTAATGGGACACTAATGGGGCGGTGAGAGGGGAACAGACTGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GCAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGAAAGGCATGGGAATCTaGTCGGTTTTCTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: AGAGCQDAEAHGIQPGEEKGMGI*SVFSRR
Trigger: GCGCCTGGAGAAAACCGACCAGATTCCCATGCCTTT...CTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp ATTAGCTGTTTCCCTGCTAAGGGCTGGTGCATCTGGCCAGGCCTAGCTTTGGCTCTGGGAGGGGGTACTTaGCTGGCCTGGGGCACCTCA +
Preference number: 4 (lower is better)
Translates to: ISCFPAKGWCIWPGLALALGGGT*LAWGTS
Trigger: TGAGGTGCCCCAGGCCAGCCAAGTACCCCCTCCCAG...AGCCAAAGCTAGGCCTGGCCAGATGCACCAGCCCTTAGCAGGGAAACAGCTAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp AGCAGAGCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCACCGGTCTGGAGATGTTaGGAGGCCGTGGACAGTGAA +
Preference number: 4 (lower is better)
Translates to: SRARCGSFRSRAGANPEPPVWRC*EAVDSE
Trigger: TTCACTGTCCACGGCCTCCCAACATCTCCAGACCGG...TGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGCTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CTTTCAGAGCCTCACCCACCAGTGCGCGTAAAACGCCAGGGCCATCTTCTTACTGGAGCCTGGCCGGTCTaGAGATGTTGGGAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: LSEPHPPVRVKRQGHLLTGAWPV*RCWEAV
Trigger: CACGGCCTCCCAACATCTCCAGACCGGCCAGGCTCC...AGTAAGAAGATGGCCCTGGCGTTTTACGCGCACTGGTGGGTGAGGCTCTGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp AGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGCCATTTTGGAAGCTTGTTaGAGACCTCTCCAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: RCGSFRSRAGANPEPAGAILEAC*RPLQLP
Trigger: CGGCAGCTGGAGAGGTCTCCAACAAGCTTCCAAAAT...GGCCCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCTGGCAGCGAGCTGCTaGGCCCCGGCAGCCGTGAAC +
Preference number: 4 (lower is better)
Translates to: LMGYSLEKSCVHKYPVQGLAASC*APAAVN
Trigger: GTTCACGGCTGCCGGGGCCCAGCAGCTCGCTGCCAG...ACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp TGGAGCCGGGCCTGTGTCTGTCAGCAGAGCAAGATGTGGTTCATTCCGCAGCCGAGGCATCCACCCAACTaGGCGCTAAAGGAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: WSRACVCQQSKMWFIPQPRHPPN*ALKEPG
Trigger: TCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCT...CGGCTGCGGAATGAACCACATCTTGCTCTGCTGACAGACACAGGCCCGGCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCTCAGAGAACATGCCAGGGTGGCAGGGGCCTaGGCAGGCAGAATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PQVPSSRSSVVSVLREHARVAGA*AGRMGL
Trigger: CAGCCCCATTCTGCCTGCCCAGGCCCCTGCCACCCT...GGCATGTTCTCTGAGGACACTAACCACGCTGGACCTTGAACTGGGTACTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp TGCAGGGAGGAAAAGGCCGTGAGGATCCGCACCAGTTTGGGGAAAGCCTGGGGGGAAGTACTTTCTCTGTaGCCCGGTGCAGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: CREEKAVRIRTSLGKAWGEVLSL*PGAVAH
Trigger: GTGAGCCACTGCACCGGGCCACAGAGAAAGTACTTC...CCCCCAGGCTTTCCCCAAACTGGTGCGGATCCTCACGGCCTTTTCCTCCCTGCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000618207.4
CDS-3UTR CCA 90 bp AGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGGAAGTACTTTCTCTGTaGCCCGGTGCAGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: RLGVAHQCLLSARCALSREVLSL*PGAVAH
Trigger: GTGAGCCACTGCACCGGGCCACAGAGAAAGTACTTC...CCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCTCTGCTAAGGTCTCATaGCACTTAGCAGGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: VAVRNVLQRRPRGSWVDRSAKVS*HLAGSS
Trigger: TGAGGACCCTGCTAAGTGCCATGAGACCTTAGCAGA...GCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp AGACAGGCTAAATGCAGATCTCACAGCATTTGCCCTGAGGAGCAGGACAGCGGGAGTGAGTGGAGGGAATaGGGCGGGGCACCCACAGCC +
Preference number: 4 (lower is better)
Translates to: RQAKCRSHSICPEEQDSGSEWRE*GGAPTA
Trigger: GGCTGTGGGTGCCCCGCCCCATTCCCTCCACTCACT...CCCGCTGTCCTGCTCCTCAGGGCAAATGCTGTGAGATCTGCATTTAGCCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp GTGACCAGCTGGAGGCACGTGGTAGACCAGGCATCTTCACAAAGCCCGCTGCTGACCTGCAGTGCCGAGTaGTTTCGGCTTTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: VTSWRHVVDQASSQSPLLTCSAE*FRLWGQ
Trigger: CTGACCCCAAAGCCGAAACCACTCGGCACTGCAGGT...CAGCAGCGGGCTTTGTGAAGATGCCTGGTCTACCACGTGCCTCCAGCTGGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp GCTGTGAGGAAGTGGGCTGTGTTAGAGACTGGGTGCTTGGAGGGGCCTTCCTGGGGCTGTGTTAGAGACTaGGTGCTTGGAGGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: AVRKWAVLETGCLEGPSWGCVRD*VLGGAF
Trigger: GAAGGCCCCTCCAAGCACCCAGTCTCTAACACAGCC...CCAGGAAGGCCCCTCCAAGCACCCAGTCTCTAACACAGCCCACTTCCTCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571186.5
CDS-3UTR CCA 90 bp TTTCTCCAGGCGCATCTGGCCGGAGGCTGGCTCCTGGTTGAACAGCGCAGGCAGTCAGCTGTGAGGAAGTaGGCTGTGTTAGAGACTGGG +
Preference number: 4 (lower is better)
Translates to: FLQAHLAGGWLLVEQRRQSAVRK*AVLETG
Trigger: CCCAGTCTCTAACACAGCCCACTTCCTCACAGCTGA...CTGCCTGCGCTGTTCAACCAGGAGCCAGCCTCCGGCCAGATGCGCCTGGAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571186.5
CDS-3UTR CCA 90 bp AACCAGGAAAGCAACTCAGACGCTAGGGCCCCGAGGGGCGGAGCGAAGCGGTACGCCCTTCGTTTGGGCTaGAAAGCTTCCTCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: NQESNSDARAPRGGAKRYALRLG*KASSSK
Trigger: TTTGCTGGAGGAAGCTTTCCAGCCCAAACGAAGGGC...GTACCGCTTCGCTCCGCCCCTCGGGGCCCTAGCGTCTGAGTTGCTTTCCTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR CAA 72 bp AGGACTCCCAGTTTGGCAAGCAGAACCCAGACTGGTTaGCAGCCCCCATGTTCCCCCTTGTCCCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: RTPSLASRTQTG*QPPCSPLSQVP
Trigger: AGGCACCTGGGACAAGGGGGAACATGGGGGCTGCAAACCAGTCTGGGTTCTGCTTGCCAAACTGGGAGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324288.14
3UTR CAA 72 bp GGTTCCGTAGTGGGCGGACCTTCCAGCAACCAGAGTTaGGAGAAGCGAAGGGGACACTGGTGGATCTCCACC +
Preference number: 4 (lower is better)
Translates to: GSVVGGPSSNQS*EKRRGHWWIST
Trigger: GGTGGAGATCCACCAGTGTCCCCTTCGCTTCTCCAAACTCTGGTTGCTGGAAGGTCCGCCCACTACGGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644232.1
CDS-3UTR TCA 90 bp GCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGCCTCACCATGGTAGATaGATATACTGGAGACCCCTG +
Preference number: 4 (lower is better)
Translates to: ARCGSFRSRAGANPEPAGPHHGR*IYWRPL
Trigger: CAGGGGTCTCCAGTATATTCATCTACCATGGTGAGG...CCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp GCAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCCTCACCATGGTAGATaGATATACTGGAGACCCCTG +
Preference number: 4 (lower is better)
Translates to: AGAGCQDAEAHGIQPGEEPHHGR*IYWRPL
Trigger: CAGGGGTCTCCAGTATATTCATCTACCATGGTGAGG...CTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp GTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGGGTGGAGAAGTACTCTTCAAGATGTGGCTaGAAACCTCATCGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: VPGVPCQGVWSESRVEKYSSRCG*KPHRPP
Trigger: TGGCGGCCGATGAGGTTTTCAGCCACATCTTGAAGA...GTACTTCTCCACCCTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR TCA 90 bp GAGCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGAACTTCTCGTCCTCTaGGTCTGCACAAGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: EQDVVHSAAGQGPTLNQQELLVL*VCTSFP
Trigger: GGGAAAGCTTGTGCAGACTCAGAGGACGAGAAGTTC...CTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618327.4
CDS-3UTR TCA 90 bp AGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACGAAAGCCTGGGGGCCTaGGACAGGGCCCAGCGCAAA +
Preference number: 4 (lower is better)
Translates to: RMLRLMGYSLEKSCVHKYESLGA*DRAQRK
Trigger: TTTGCGCTGGGCCCTGTCTCAGGCCCCCAGGCTTTC...GTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp GAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCCTGGGGGAAGGTGGCTaGGAGCTGCGAGACACCCTC +
Preference number: 4 (lower is better)
Translates to: EKSCVHKYPVQGPAWLVSLGEGG*ELRDTL
Trigger: GAGGGTGTCTCGCAGCTCTCAGCCACCTTCCCCCAG...GGACACTAACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp TGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTTGTACAAGCTTAGCCTaGGCAGGGATGCAGCGAGCG +
Preference number: 4 (lower is better)
Translates to: WGISRLGVAHQCLLSARCCTSLA*AGMQRA
Trigger: CGCTCGCTGCATCCCTGCTCAGGCTAAGCTTGTACA...ACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp TGTCTGGTCGGAGAGCAGGGTGGAGAAGTACTTTCTCTGTGGCCCGGTGCAGTGTGTACAAGCTTAGCCTaGGCAGGGATGCAGCGAGCG +
Preference number: 4 (lower is better)
Translates to: CLVGEQGGEVLSLWPGAVCTSLA*AGMQRA
Trigger: CGCTCGCTGCATCCCTGCTCAGGCTAAGCTTGTACA...CACTGCACCGGGCCACAGAGAAAGTACTTCTCCACCCTGCTCTCCGACCAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp CAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTGGGCCCCGGCAGCCGTaGACTTGTTGTACTGGACGT +
Preference number: 4 (lower is better)
Translates to: QPGEELCPQVPSSRSSVVGPRQP*TCCTGR
Trigger: ACGTCCAGTACAACAAGTTCACGGCTGCCGGGGCCC...AACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp GTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGGGTGGAGAAGTACTCTCAGGCTGATCCGTaGATCCTGTTGTTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: VPGVPCQGVWSESRVEKYSQADP*ILLLQV
Trigger: CACCTGCAACAACAGGATTCACGGATCAGCCTGAGA...GTACTTCTCCACCCTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp CCGTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCAAAATTAGCCAGACATaGTGGTGGGTGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: PWLSAMSFREGLGAPGWTKISQT*WWVPVV
Trigger: GACTACAGGCACCCACCATCATGTCTGGCTAATTTT...GGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp GCCGTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACAAAATTAGCCAGACATaGTGGTGGGTGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: AVAVRNVLQRRPRGSWVDKISQT*WWVPVV
Trigger: GACTACAGGCACCCACCATCATGTCTGGCTAATTTT...GTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCACGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp AGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGCTGAGGTCAAGAGTTTaGGACCAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: RLGVAHQCLLSARCALSRLRSRV*DQPGQH
Trigger: ATGTTGGCCAGGCTGGTCTCAAACTCTTGACCTCAG...CCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp CAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGGGTGGGTGGATCACCTaGGGTCAAGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: QCLLSARCALSRCLVGEQGGWIT*GQEFET
Trigger: GGTCTCAAACTCTTGACCTCAGGTGATCCACCCACC...CTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp CGCAGCAGCGGATCAGATCAGCTCTCAGGGCCCCGACACCCCCTGAGCACCTACTTGCAGGGTGACACCTaGGCTATTTACAAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: RSSGSDQLSGPRHPLSTYLQGDT*AIYKLN
Trigger: GTTCAGCTTGTAAATAGCTCAGGTGTCACCCTGCAA...GTAGGTGCTCAGGGGGTGTCGGGGCCCTGAGAGCTGATCTGATCCGCTGCTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp GACGTGGTCAGTGTCAATGGCGTGTCAGACCCTGAAGGGGCTCTAGCCCAGGAACAGCGCTTTACCACCTaGCAAATGGGGTTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: DVVSVNGVSDPEGALAQEQRFTT*QMGFRG
Trigger: GCCCCTGAACCCCATTTGTCAGGTGGTAAAGCGCTG...TTCCTGGGCTAGAGCCCCTTCAGGGTCTGACACGCCATTGACACTGACCACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp AACCAGAGCAGTGGGTACCCCAAAATGGTAACAGGGTATGAACTCAAACCCTGGCCAGTCGGGCTGGCGTaGAAGTCCCAGGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: NQSSGYPKMVTGYELKPWPVGLA*KSQAGP
Trigger: GGGGCCAGCCTGGGACTTTCACGCCAGCCCGACTGG...CCAGGGTTTGAGTTCATACCCTGTTACCATTTTGGGGTACCCACTGCTCTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp AGGGCAGCTACAGCCAGACTAGCGCCTGGCTGGGACTGTCGGGGATGCGGTTTGGCAGAACCTTGTGGCTaGCAAACAGCAGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: RAATARLAPGWDCRGCGLAEPCG*QTAEDP
Trigger: TGGATCTTCTGCTGTTTGTCAGCCACAAGGTTCTGC...CAAACCGCATCCCCGACAGTCCCAGCCAGGCGCTAGTCTGGCTGTAGCTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp TGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTGCCAAGTGGGGCTGCTaGGTAACTTGGCTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: WGISRLGVAHQCLLSARCAKWGC*VTWLWL
Trigger: TAGCCACAGCCAAGTTACTCAGCAGCCCCACTTGGC...ACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp AGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTAAGGGAGTCTTGGGCGTaGCCAGCTGGAGGCACGTGG +
Preference number: 4 (lower is better)
Translates to: SLEKSCVHKYPVQGPAWLRESWA*PAGGTW
Trigger: CCACGTGCCTCCAGCTGGTCACGCCCAAGACTCCCT...TAACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp TGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTGTGCTCTGTCATGTTTaGTCGGGAGGTCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: WGISRLGVAHQCLLSARCVLCHV*SGGQGR
Trigger: CCTGCCCTGACCTCCCGAGCAAACATGACAGAGCAC...ACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp GTACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCTCAGAGAACATGCCTGTCCAGATGCCATCCGGGCCTaGGGGCTCGGCACCATACGT +
Preference number: 4 (lower is better)
Translates to: VPSSRSSVVSVLREHACPDAIRA*GLGTIR
Trigger: ACGTATGGTGCCGAGCCCGCAGGCCCGGATGGCATC...TGGACAGGCATGTTCTCTGAGGACACTAACCACGCTGGACCTTGAACTGGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp AACCAGAGCAGTGGGTACCCCAAAATGGTAACAGGGTATGAACTCAAACCCTGGGGCCAGCTGCCGTTCTaGCCAGTCCGGGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: NQSSGYPKMVTGYELKPWGQLPF*PVRGGQ
Trigger: CTGGCCACCCCGGACTGGGCAGAACGGCAGCTGGCC...CCAGGGTTTGAGTTCATACCCTGTTACCATTTTGGGGTACCCACTGCTCTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp CTTTCAGAGCCTCACCCACCAGTGCGCGTAAAACGCCAGGGCCATCTTCTTACTATAGGGCGTCGGCCTTaGTCAGGCTCTGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: LSEPHPPVRVKRQGHLLTIGRRP*SGSGPG
Trigger: GCCTGGTCCAGAGCCTGAGCAAGGCCGACGCCCTAT...AGTAAGAAGATGGCCCTGGCGTTTTACGCGCACTGGTGGGTGAGGCTCTGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp CAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTATAGGGCGTCGGCCTTaGTCAGGCTCTGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: QPGEELCPQVPSSRSSVVIGRRP*SGSGPG
Trigger: GCCTGGTCCAGAGCCTGAGCAAGGCCGACGCCCTAT...AACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp CATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCTCGCAAGCACCTTCTaGTTCCTGTCCACCGAGGCA +
Preference number: 4 (lower is better)
Translates to: HQCLLSARCALSRCLVGELASTF*FLSTEA
Trigger: TGCCTCGGTGGACAGGAAGCAGAAGGTGCTTGCGAG...CTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp TACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCTCAGAGAACATGCCTGTCCAGCGCAGTGTCCCCGGCTaGAGCCGCTTCAGGTACCTC +
Preference number: 4 (lower is better)
Translates to: YPVQGPAWLVSSENMPVQRSVPG*SRFRYL
Trigger: GAGGTACCTGAAGCGGCTGCAGCCGGGGACACTGCG...CTGGACAGGCATGTTCTCTGAGGACACTAACCACGCTGGACCTTGAACTGGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp TGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTCTTGCCCAGTACATGTaGATCAGGAGGCGTGAGGCG +
Preference number: 4 (lower is better)
Translates to: WGISRLGVAHQCLLSARCLAQYM*IRRREA
Trigger: CGCCTCACGCCTCCTGATGCACATGTACTGGGCAAG...ACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp CCCAGCCTGTTGCAATCTGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCCCGCCTCCAAGGCCTTaGCCAGTACATGTGCATCAG +
Preference number: 4 (lower is better)
Translates to: PSLLQSGELAGWGLPISVPPPRP*PVHVHQ
Trigger: CTGATGCACATGTACTGGGCAAGGCCTTGGAGGCGG...GACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCAGATTGCAACAGGCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp AGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACGTCTCCCCATGCTGCTaGAGGGACTCCCACAGCGCC +
Preference number: 4 (lower is better)
Translates to: RMLRLMGYSLEKSCVHKYVSPCC*RDSHSA
Trigger: GGCGCTGTGGGAGTCCCTGCAGCAGCATGGGGAGAC...GTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618327.4
CDS-3UTR GCA 90 bp TTATGGAAAAAGCCTTCGCTCCCAAATCCATTTGAGGCAGAGCTGTCAGCTCCTAGGCTGGCAGCGAGCTaGTGGGCCCCGGCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: LWKKPSLPNPFEAELSAPRLAAS*WAPAAV
Trigger: CACGGCTGCCGGGGCCCAGCAGCTCGCTGCCAGCCT...AGGAGCTGACAGCTCTGCCTCAAATGGATTTGGGAGCGAAGGCTTTTTCCATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644232.1
CDS-3UTR GCA 90 bp GGCAGGAATATTGCAGAAGTGAGTGTGTGTCTTCAGTGCATCTTATCGAGAGGCAGGCTGGCAGCGAGCTaGTGGGCCCCGGCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: GRNIAEVSVCLQCILSRGRLAAS*WAPAAV
Trigger: CACGGCTGCCGGGGCCCAGCAGCTCGCTGCCAGCCT...GCCTCTCGATAAGATGCACTGAAGACACACACTCACTTCTGCAATATTCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000646979.1
CDS-3UTR GCA 90 bp CAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCCGTGAATCCTGTTGTTaGAGGTGTTCCTGGACACTG +
Preference number: 4 (lower is better)
Translates to: QGPGARMLRLMGYSLEKSRESCC*RCSWTL
Trigger: CAGTGTCCAGGAACACCTGCAACAACAGGATTCACG...GCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp TGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCACGTGAATCCTGTTGTTaGAGGTGTTCCTGGACACTG +
Preference number: 4 (lower is better)
Translates to: WLSAMSFREGLGAPGWTARESCC*RCSWTL
Trigger: CAGTGTCCAGGAACACCTGCAACAACAGGATTCACG...TGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp GATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCTGGGTGGACCGCAGCTaGCACCAGGCATCCACCCAA +
Preference number: 4 (lower is better)
Translates to: DAEAHGIQPGEELCPQVPWVDRS*HQASTQ
Trigger: TTGGGTGGATGCCTGGTGGCAGCTGCGGTCCACCCA...GGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp GCAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCAGGAAATGAAGCTGTaGTTCCAGTCTGTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: AGAGCQDAEAHGIQPGEEQEMKL*FQSVPL
Trigger: GAGGGGAACAGACTGGAAGCACAGCTTCATTTCCTG...CTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp ACCAGGCATCCACCCAACTGGGCGCTAAAGGAGCCTGGAGCCGGGCCTGTGTCTAGTGAGTTGAGATCATaGCACTGCATTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: TRHPPNWALKEPGAGPVSSELRS*HCIPAW
Trigger: CCAGGCTGGAATGCAGTGGCATGATCTCAACTCACT...AGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp CAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCACAGTCATAGTTCACTaGAGCCTTGAACTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: QGPGARMLRLMGYSLEKSTVIVH*SLELLG
Trigger: GCCCAGCAGTTCAAGGCTGCAGTGAACTATGACTGT...GCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp CCCAGCCTGTTGCAATCTGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCAGGCAGCTTCTCCTTTaGCGTCTGTCTCCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: PSLLQSGELAGWGLPISVRQLLL*RLSPSG
Trigger: GCCGGAAGGAGACAGACGGCAAAGGAGAAGCTGCCT...GACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCAGATTGCAACAGGCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp GCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGCTTTGGCAGCCAACGTaGAAATCCGAAGCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: ARCGSFRSRAGANPEPAGLWQPT*KSEARF
Trigger: AAACCTGGCTTCGGATTTGCACGTTGGCTGCCAAAG...CCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp TGGGAATCTGGTCGGTTTTCTCCAGGCGCATCTGGCCGGAGGCTGGCTCCTGGTCTTCTCAGCCCTGGCTaGAGCTGTGTTGATCAGCAA +
Preference number: 4 (lower is better)
Translates to: WESGRFSPGASGRRLAPGLLSPG*SCVDQQ
Trigger: TTGCTGATCAACACAGCTGCAGCCAGGGCTGAGAAG...ACCAGGAGCCAGCCTCCGGCCAGATGCGCCTGGAGAAAACCGACCAGATTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571186.5
CDS-3UTR CCA 90 bp GATGGGTCCCTCAGGGAGATTCAGGCAGCTCAACGAGGAACTGGAGAAAGGCATGGACCCAGCAGGGCGTaGAGCCAGGCAACGCATTGT +
Preference number: 4 (lower is better)
Translates to: DGSLREIQAAQRGTGERHGPSRA*SQATHC
Trigger: ACAATGCGTTGCCTGGCTCCACGCCCTGCTGGGTCC...ATGCCTTTCTCCAGTTCCTCGTTGAGCTGCCTGAATCTCCCTGAGGGACCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571186.5
CDS-3UTR CCA 90 bp CATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGGCCCCAACTCCATGGTaGCACACTGTGAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: HQCLLSARCALSRCLVGEAPTPW*HTVSCL
Trigger: AAGGCAGCTCACAGTGTGCCACCATGGAGTTGGGGC...CTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTGGGGCCCCAACTCCATaGTGGCACACTGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: QPGEELCPQVPSSRSSVVGAPTP*WHTVSC
Trigger: GCAGCTCACAGTGTGCCACCATGGAGTTGGGGCCCC...AACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGGCATAAGCCTCCCTaGTCTCTTCATCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: QGPGARMLRLMGYSLEKSWHKPP*SLHHLP
Trigger: TGGAAGGTGATGAAGAGACCAGGGAGGCTTATGCCA...GCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GAGCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGTGCCGGAAGCTCCTCTaGGAAGGGTCTTTTCTGACT +
Preference number: 4 (lower is better)
Translates to: EQDVVHSAAGQGPTLNQQCRKLL*EGSFLT
Trigger: AGTCAGAAAAGACCCTTCCCAGAGGAGCTTCCGGCA...CTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp ATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGAACAGCGCAGGCAGTaGCAGGCAGGGCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: IQPGEELCPQVPSSRSSVEQRRQ*QAGQGG
Trigger: TCCACCCTGCCCTGCCTGCCACTGCCTGCGCTGTTC...CACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp AGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACGAACAGCGCAGGCAGTaGCAGGCAGGGCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: RMLRLMGYSLEKSCVHKYEQRRQ*QAGQGG
Trigger: TCCACCCTGCCCTGCCTGCCACTGCCTGCGCTGTTC...GTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GATGGGTCCCTCAGGGAGATTCAGGCAGCTCAACGAGGAACTGGAGAAAGGCATCCGGAGGCTGGCTCCTaGTTGAACAGCGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: DGSLREIQAAQRGTGERHPEAGS*LNSAGS
Trigger: ACTGCCTGCGCTGTTCAACCAGGAGCCAGCCTCCGG...ATGCCTTTCTCCAGTTCCTCGTTGAGCTGCCTGAATCTCCCTGAGGGACCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571186.5
CDS-3UTR CCA 90 bp GTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGGGTGGAGAAGTACTGGGGACAAACTGGATaGGTCCCTCAGGGAGATTCA +
Preference number: 4 (lower is better)
Translates to: VPGVPCQGVWSESRVEKYWGQTG*VPQGDS
Trigger: TGAATCTCCCTGAGGGACCCATCCAGTTTGTCCCCA...GTACTTCTCCACCCTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GCCCAGCCTGTTGCAATCTGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTGCCCATGGGGCAGAGTaGAGATGGTGGGGACAAACT +
Preference number: 4 (lower is better)
Translates to: AQPVAIWGISRLGVAHQCAHGAE*RWWGQT
Trigger: AGTTTGTCCCCACCATCTCCACTCTGCCCCATGGGC...ACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCAGATTGCAACAGGCTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp ATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGCTGGGAGGGGGTACTTaGCTGGCCTGGGGCACCTCA +
Preference number: 4 (lower is better)
Translates to: IQPGEELCPQVPSSRSSVLGGGT*LAWGTS
Trigger: TGAGGTGCCCCAGGCCAGCCAAGTACCCCCTCCCAG...CACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp ATTAGCTGTTTCCCTGCTAAGGGCTGGTGCATCTGGCCAGGCCTAGCTTTGGCTTGCTGGGCAGGTCAGTaGCTGATGGAGCGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: ISCFPAKGWCIWPGLALACWAGQ*LMERRG
Trigger: GCCCCTTCGCTCCATCAGCCACTGACCTGCCCAGCA...AGCCAAAGCTAGGCCTGGCCAGATGCACCAGCCCTTAGCAGGGAAACAGCTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp AGCAGAGCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAAAGACAAAGTCGTACTaGGGAAGCCGGCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: SRARCGSFRSRAGANPEPKTKSY*GSRPQA
Trigger: GGCTTGTGGCCGGCTTCCCCAGTACGACTTTGTCTT...TGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGCTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR CCA 90 bp TGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGGTCTCTTCAAGATGTaGCTGAAAACCTCATCGGCC +
Preference number: 4 (lower is better)
Translates to: WLSAMSFREGLGAPGWTAGLFKM*LKTSSA
Trigger: GGCCGATGAGGTTTTCAGCCACATCTTGAAGAGACC...TGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR CCA 90 bp TGGAGCCGGGCCTGTGTCTGTCAGCAGAGCAAGATGTGGTTCATTCCGCAGCCGGTTGGACTAAGCCTTTaGCCATCGCCCAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: WSRACVCQQSKMWFIPQPVGLSL*PSPRSS
Trigger: TGAGGACCTGGGCGATGGCCAAAGGCTTAGTCCAAC...CGGCTGCGGAATGAACCACATCTTGCTCTGCTGACAGACACAGGCCCGGCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR CCA 90 bp GCTTCCAGTCTGTTCCCCTCTCACCGCCCCATTAGTGTCCCATTAGCTGTTTCCCCCAGCCAGAAAGCGTaGCACGCCCTCCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: ASSLFPSHRPISVPLAVSPSQKA*HALQPV
Trigger: AACTGGCTGGAGGGCGTGCCACGCTTTCTGGCTGGG...GGAAACAGCTAATGGGACACTAATGGGGCGGTGAGAGGGGAACAGACTGGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR CCA 90 bp ATTAGCTGTTTCCCTGCTAAGGGCTGGTGCATCTGGCCAGGCCTAGCTTTGGCTCCCAGCCAGAAAGCGTaGCACGCCCTCCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: ISCFPAKGWCIWPGLALAPSQKA*HALQPV
Trigger: AACTGGCTGGAGGGCGTGCCACGCTTTCTGGCTGGG...AGCCAAAGCTAGGCCTGGCCAGATGCACCAGCCCTTAGCAGGGAAACAGCTAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR CCA 90 bp AGCAGAGCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCACTGCCTGAAGTAGCTTaGTCTCCCCATGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SRARCGSFRSRAGANPEPLPEVA*SPHAAA
Trigger: TGCAGCAGCATGGGGAGACCAAGCTACTTCAGGCAG...TGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGCTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618327.4
CDS-3UTR CCA 90 bp CAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTAGTTTGGGGAAAGCCTaGGGGCCTGAGACAGGGCCC +
Preference number: 4 (lower is better)
Translates to: QPGEELCPQVPSSRSSVVSLGKA*GPETGP
Trigger: GGGCCCTGTCTCAGGCCCCCAGGCTTTCCCCAAACT...AACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp ATTAGCTGTTTCCCTGCTAAGGGCTGGTGCATCTGGCCAGGCCTAGCTTTGGCTGGATCCGCACCAGTTTaGGGAAAGCCTGGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: ISCFPAKGWCIWPGLALAGSAPV*GKPGGL
Trigger: CAGGCCCCCAGGCTTTCCCCAAACTGGTGCGGATCC...AGCCAAAGCTAGGCCTGGCCAGATGCACCAGCCCTTAGCAGGGAAACAGCTAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GCTTTGGCCAACAATGTCAGTGCATTGAGTCCCATAGACAAAAGCAGCTGCCACCTGGCAGCGAGCTGCTaGGCCCCGGCAGCCGTGAAC +
Preference number: 4 (lower is better)
Translates to: ALANNVSALSPIDKSSCHLAASC*APAAVN
Trigger: GTTCACGGCTGCCGGGGCCCAGCAGCTCGCTGCCAG...GTGGCAGCTGCTTTTGTCTATGGGACTCAATGCACTGACATTGTTGGCCAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp AGAGGGAGGAATTCCCAGGCCGGATACACACCCCTCCCTCAGGCTTCTCCTCCGTTCCTGGACACTGAATaGGATGGTGGGCGTCCACAT +
Preference number: 4 (lower is better)
Translates to: RGRNSQAGYTPLPQASPPFLDTE*DGGRPH
Trigger: ATGTGGACGCCCACCATCCCATTCAGTGTCCAGGAA...CGGAGGAGAAGCCTGAGGGAGGGGTGTGTATCCGGCCTGGGAATTCCTCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644232.1
CDS-3UTR CCA 90 bp AGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCCAGAGCACAGCTaGGATCATCTCAGGCTGATC +
Preference number: 4 (lower is better)
Translates to: RLGVAHQCLLSARCALSRCPEHS*DHLRLI
Trigger: GATCAGCCTGAGATGATCCCAGCTGTGCTCTGGACA...CCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp AGAGGGAGGAATTCCCAGGCCGGATACACACCCCTCCCTCAGGCTTCTCCTCCGTGTCCAGAGCACAGCTaGGATCATCTCAGGCTGATC +
Preference number: 4 (lower is better)
Translates to: RGRNSQAGYTPLPQASPPCPEHS*DHLRLI
Trigger: GATCAGCCTGAGATGATCCCAGCTGTGCTCTGGACA...CGGAGGAGAAGCCTGAGGGAGGGGTGTGTATCCGGCCTGGGAATTCCTCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644232.1
CDS-3UTR CCA 90 bp GCAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGTCATGGGATACAGCCTaGAGAAGAGCTGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: AGAGCQDAEAHGIQPGEESWDTA*RRAVST
Trigger: TGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGA...CTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp TACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGGGCGCTAAAGGAGCCTaGAGCCGGGCCTGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: YSLEKSCVHKYPVQGPAWGAKGA*SRACVC
Trigger: ACAGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCC...CCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GCTTTGGCCAACAATGTCAGTGCATTGAGTCCCATAGACAAAAGCAGCTGCCACCTCGGGGCTCCTGGGTaGACCGCAGCTGCCACCAGG +
Preference number: 4 (lower is better)
Translates to: ALANNVSALSPIDKSSCHLGAPG*TAAATR
Trigger: CCTGGTGGCAGCTGCGGTCCACCCAGGAGCCCCGAG...GTGGCAGCTGCTTTTGTCTATGGGACTCAATGCACTGACATTGTTGGCCAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTTCACTCCCTCTGGCCTaGCCGTGGCTGTCCGCAATG +
Preference number: 4 (lower is better)
Translates to: QPGEELCPQVPSSRSSVVSLPLA*PWLSAM
Trigger: CATTGCGGACAGCCACGGCCAGGCCAGAGGGAGTGA...AACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GTACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCTCAGAGAACATGCCTGTCCACTCTGTCACTCCCTCTaGCCTGGCCGTGGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: VPSSRSSVVSVLREHACPLCHSL*PGRGCP
Trigger: CGGACAGCCACGGCCAGGCCAGAGGGAGTGACAGAG...TGGACAGGCATGTTCTCTGAGGACACTAACCACGCTGGACCTTGAACTGGGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp AGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGGGTCGGAGAGCAGGGTaGAGAAGTACTTTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: RLGVAHQCLLSARCALSRGRRAG*RSTFSV
Trigger: CACAGAGAAAGTACTTCTCCACCCTGCTCTCCGACC...CCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GCACACGAGCCAAGCTCTCGGCTCCCACGTCGCAGATGCAGTTATTGTACAAGCCCCTGTCAAGGTGTCTaGTCGGAGAGCAGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: AHEPSSRLPRRRCSYCTSPCQGV*SESRVE
Trigger: CTCCACCCTGCTCTCCGACCAGACACCTTGACAGGG...GCTTGTACAATAACTGCATCTGCGACGTGGGAGCCGAGAGCTTGGCTCGTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618207.4
CDS-3UTR CCA 90 bp CGCAGCAGCGGATCAGATCAGCTCTCAGGGCCCCGACACCCCCTGAGCACCTACCATTTGGAAGGTGCGTaGACTTACAATCCACTGGAC +
Preference number: 4 (lower is better)
Translates to: RSSGSDQLSGPRHPLSTYHLEGA*TYNPLD
Trigger: GTCCAGTGGATTGTAAGTCCACGCACCTTCCAAATG...GTAGGTGCTCAGGGGGTGTCGGGGCCCTGAGAGCTGATCTGATCCGCTGCTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp CATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGTCTGCTTCAGGCTGCTaGCCAGCAGGTGTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: HQCLLSARCALSRCLVGESASGC*PAGVSG
Trigger: TCCTGAGACACCTGCTGGCCAGCAGCCTGAAGCAGA...CTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp CAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTAGACTAGCGCCTGGCTaGGACTGTCGGGGATGCGGT +
Preference number: 4 (lower is better)
Translates to: QPGEELCPQVPSSRSSVVRLAPG*DCRGCG
Trigger: ACCGCATCCCCGACAGTCCCAGCCAGGCGCTAGTCT...AACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp TCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGGGTGGCTACACATAGAAACCTaGGGTCACCTCCCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: SSECPVCPVKVSGRRAGWLHIET*GHLPVL
Trigger: GAGGACAGGGAGGTGACCCCAGGTTTCTATGTGTAG...CCACCCTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp CAGGCATCCACCCAACTGGGCGCTAAAGGAGCCTGGAGCCGGGCCTGTGTCTGTACAGTTCTTCCACTGTaGCCCAGGGAAGCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: QASTQLGAKGAWSRACVCTVLPL*PREAKR
Trigger: TCTTTTGGCTTCCCTGGGCCACAGTGGAAGAACTGT...ACAGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp GACGTGGTCAGTGTCAATGGCGTGTCAGACCCTGAAGGGGCTCTAGCCCAGGAACTGGCCCAGAGAGGGTaGGTGACTTGTCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: DVVSVNGVSDPEGALAQELAQRG*VTCLRS
Trigger: TGACCTCAGACAAGTCACCCACCCTCTCTGGGCCAG...TTCCTGGGCTAGAGCCCCTTCAGGGTCTGACACGCCATTGACACTGACCACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp GTCAGGCACTCCATGGACACAAACAGCCCAATGTGGTGGGCACTGTCCCCTTTTGGATGTGGCAGGACCTaGAGGGAGGCACTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: VRHSMDTNSPMWWALSPFGCGRT*REALGK
Trigger: CTTGCCCAGTGCCTCCCTCCAGGTCCTGCCACATCC...AAAAGGGGACAGTGCCCACCACATTGGGCTGTTTGTGTCCATGGAGTGCCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp CTTTCAGAGCCTCACCCACCAGTGCGCGTAAAACGCCAGGGCCATCTTCTTACTAGTGAGGTGGTCTGCTaGAGGCGTCCCAGGGCGGTA +
Preference number: 4 (lower is better)
Translates to: LSEPHPPVRVKRQGHLLTSEVVC*RRPRAV
Trigger: TACCGCCCTGGGACGCCTCCAGCAGACCACCTCACT...AGTAAGAAGATGGCCCTGGCGTTTTACGCGCACTGGTGGGTGAGGCTCTGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp GCCGTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACGAGCCTTCTTCAGTCTaGATCAGCTCTTCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: AVAVRNVLQRRPRGSWVDEPSSV*ISSSVC
Trigger: ACAGACTGAAGAGCTGATCCAGACTGAAGAAGGCTC...GTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCACGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp TGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGGGAAGGGTCTTTTCTaGCTTTTCTGCCCAACTTCT +
Preference number: 4 (lower is better)
Translates to: WLSAMSFREGLGAPGWTAGKGLF*LFCPTS
Trigger: AGAAGTTGGGCAGAAAAGTCAGAAAAGACCCTTCCC...TGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp ACCAGGCATCCACCCAACTGGGCGCTAAAGGAGCCTGGAGCCGGGCCTGTGTCTGGGAAGGGTCTTTTCTaGCTTTTCTGCCCAACTTCT +
Preference number: 4 (lower is better)
Translates to: TRHPPNWALKEPGAGPVSGKGLF*LFCPTS
Trigger: AGAAGTTGGGCAGAAAAGTCAGAAAAGACCCTTCCC...AGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp GAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCAGGCTGGCTCCTGGTTaGACAGCGCAGGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: EKSCVHKYPVQGPAWLVSRLAPG*TAQAVA
Trigger: TGCCACTGCCTGCGCTGTTCAACCAGGAGCCAGCCT...GGACACTAACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp AGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACAGGCTGGCTCCTGGTTaGACAGCGCAGGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: RMLRLMGYSLEKSCVHKYRLAPG*TAQAVA
Trigger: TGCCACTGCCTGCGCTGTTCAACCAGGAGCCAGCCT...GTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp CTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTGGAGGCCGTGGACAGTaGATCCACTGGGAGGGGGTA +
Preference number: 4 (lower is better)
Translates to: LRLMGYSLEKSCVHKYPVGGRGQ*IHWEGV
Trigger: TACCCCCTCCCAGTGGATTCACTGTCCACGGCCTCC...AACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp TGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTGGAGCTCCTTGTCCTTaGTTTCGCCACTCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: WGISRLGVAHQCLLSARCGAPCP*FRHSEP
Trigger: TGGCTCTGAGTGGCGAAATCAAGGACAAGGAGCTCC...ACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR TCA 90 bp AGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACGCCAGCGTCTCCACATaGGGACACCTCCGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: RMLRLMGYSLEKSCVHKYASVST*GHLRRL
Trigger: CAGCCTTCGGAGGTGTCCTCATGTGGAGACGCTGGC...GTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp CCGCCTCCTTTTAAAGGAGAAACGGAGTCCCAAAGAGGCATGCAGCAAGGTGCAGCCAGCGTCTCCACATaGGGACACCTCCGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: PPPFKGETESQRGMQQGAASVST*GHLRRL
Trigger: CAGCCTTCGGAGGTGTCCTCATGTGGAGACGCTGGC...TGCACCTTGCTGCATGCCTCTTTGGGACTCCGTTTCTCCTTTAAAAGGAGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644232.1
CDS-3UTR TCA 90 bp TCCCAGCTCCACCAACACCTCAGACTTCATCTCCTAAGCCTCGGTTTCCTTCTCGCCAGCGTCTCCACATaGGGACACCTCCGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SQLHQHLRLHLLSLGFLLASVST*GHLRRL
Trigger: CAGCCTTCGGAGGTGTCCTCATGTGGAGACGCTGGC...GAGAAGGAAACCGAGGCTTAGGAGATGAAGTCTGAGGTGTTGGTGGAGCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000644232.1
ENST00000646979.1
CDS-3UTR TCA 90 bp TCCTTAACTCTAGGATGCAGGTTCCGTAGTGGGCGGACCTTCCAGCAACCAGAGGGTGTTCCTGGACACTaGATGGGATGGTGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: SLTLGCRFRSGRTFQQPEGVPGH*MGWWAS
Trigger: GGACGCCCACCATCCCATTCAGTGTCCAGGAACACC...CTCTGGTTGCTGGAAGGTCCGCCCACTACGGAACCTGCATCCTAGAGTTAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644232.1
CDS-3UTR TCA 90 bp GAGCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGGATCATCTCAGGCTaGTCCGTGAATCCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: EQDVVHSAAGQGPTLNQQGIISG*SVNPVV
Trigger: AACAACAGGATTCACGGATCAGCCTGAGATGATCCC...CTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp AGAGGGAGGAATTCCCAGGCCGGATACACACCCCTCCCTCAGGCTTCTCCTCCGGGGATCATCTCAGGCTaGTCCGTGAATCCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: RGRNSQAGYTPLPQASPPGIISG*SVNPVV
Trigger: AACAACAGGATTCACGGATCAGCCTGAGATGATCCC...CGGAGGAGAAGCCTGAGGGAGGGGTGTGTATCCGGCCTGGGAATTCCTCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644232.1
CDS-3UTR TCA 90 bp GTACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCTCAGAGAACATGCCTGTCCACGGGTGCCAGGATGCTaGGGCTCATGGGATACAGCC +
Preference number: 4 (lower is better)
Translates to: VPSSRSSVVSVLREHACPRVPGC*GSWDTA
Trigger: GGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCG...TGGACAGGCATGTTCTCTGAGGACACTAACCACGCTGGACCTTGAACTGGGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp TGTCTGGTCGGAGAGCAGGGTGGAGAAGTACTTTCTCTGTGGCCCGGTGCAGTGGGTGGGTGGATCACCTaGGGTCAAGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: CLVGEQGGEVLSLWPGAVGGWIT*GQEFET
Trigger: GGTCTCAAACTCTTGACCTCAGGTGATCCACCCACC...CACTGCACCGGGCCACAGAGAAAGTACTTCTCCACCCTGCTCTCCGACCAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp AGCAGAGCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAAAAAGCAGCTGCCACTaGAGCCCAGCCTGTTGCAAT +
Preference number: 4 (lower is better)
Translates to: SRARCGSFRSRAGANPEPKSSCH*SPACCN
Trigger: ATTGCAACAGGCTGGGCTTCAGTGGCAGCTGCTTTT...TGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGCTCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp TGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTGGCAGGAGAATTGCTTaGAACCAGGGAGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: WGISRLGVAHQCLLSARCGRRIA*NQGGRG
Trigger: ACCTCTGCCTCCCTGGTTTCAAGCAATTCTCCTGCC...ACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp CATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCCTTCCTCTCCCGTGTaGCATTGCACTGGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: HQCLLSARCALSRCLVGEPSSPV*HCTGSP
Trigger: TGGAGAACCAGTGCAATGTCACACGGGAGAGGAAGG...CTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp GCTTTGGCCAACAATGTCAGTGCATTGAGTCCCATAGACAAAAGCAGCTGCCACTCACGCGGCCGCCGGTaGTCCTTGGCAGCCAACAGC +
Preference number: 4 (lower is better)
Translates to: ALANNVSALSPIDKSSCHSRGRR*SLAANS
Trigger: GCTGTTGGCTGCCAAGGAGCACCGGCGGCCGCGTGA...GTGGCAGCTGCTTTTGTCTATGGGACTCAATGCACTGACATTGTTGGCCAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp AGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGGCCCGGCTCACTaGCCCAGCCCAATAGCTCTT +
Preference number: 4 (lower is better)
Translates to: RMLRLMGYSLEKSCVHKYPGPAH*PSPIAL
Trigger: AAGAGCTATTGGGCTGGGGCAGTGAGCCGGGCCTGG...GTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp ATTAGCTGTTTCCCTGCTAAGGGCTGGTGCATCTGGCCAGGCCTAGCTTTGGCTGTGCCGGTCCGCACGTaGTGTGCAGGAAGCCATCTT +
Preference number: 4 (lower is better)
Translates to: ISCFPAKGWCIWPGLALAVPVRT*CAGSHL
Trigger: AAGATGGCTTCCTGCACAGCACGTGCGGACCGGCAC...AGCCAAAGCTAGGCCTGGCCAGATGCACCAGCCCTTAGCAGGGAAACAGCTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp GCTTCCAGTCTGTTCCCCTCTCACCGCCCCATTAGTGTCCCATTAGCTGTTTCCGCCCCCAGGAAGCATTaGAGGAGGAAGCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: ASSLFPSHRPISVPLAVSAPRKH*RRKLGK
Trigger: CTTCCCCAGCTTCCTCCTGCAATGCTTCCTGGGGGC...GGAAACAGCTAATGGGACACTAATGGGGCGGTGAGAGGGGAACAGACTGGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp GACGTGGTCAGTGTCAATGGCGTGTCAGACCCTGAAGGGGCTCTAGCCCAGGAAAGCTCCTGTACCACGTaGTGCCAAATTCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: DVVSVNGVSDPEGALAQESSCTT*CQIPAS
Trigger: GGAGGCTGGAATTTGGCAGCACGTGGTACAGGAGCT...TTCCTGGGCTAGAGCCCCTTCAGGGTCTGACACGCCATTGACACTGACCACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp GTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCCTCCCACGTCGCAGATaGAGTTATTGTACAAGCTTA +
Preference number: 4 (lower is better)
Translates to: VAVRNVLQRRPRGSWVDRLPRRR*SYCTSL
Trigger: TAAGCTTGTACAATAACTGCATCTGCGACGTGGGAG...GCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp GGAGAGGGAGGAATTCCCAGGCCGGATACACACCCCTCCCTCAGGCTTCTCCTCCGTGAATCCTGTTGTTaGAGGTGTTCCTGGACACTG +
Preference number: 4 (lower is better)
Translates to: GEGGIPRPDTHPSLRLLLRESCC*RCSWTL
Trigger: CAGTGTCCAGGAACACCTGCAACAACAGGATTCACG...GAGGAGAAGCCTGAGGGAGGGGTGTGTATCCGGCCTGGGAATTCCTCCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644232.1
CDS-3UTR GCA 90 bp GTACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCTCAGAGAACATGCCTGTCCATGGGTGGACCGCAGCTaGCACCAGGCATCCACCCAA +
Preference number: 4 (lower is better)
Translates to: VPSSRSSVVSVLREHACPWVDRS*HQASTQ
Trigger: TTGGGTGGATGCCTGGTGGCAGCTGCGGTCCACCCA...TGGACAGGCATGTTCTCTGAGGACACTAACCACGCTGGACCTTGAACTGGGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp ATTAGCTGTTTCCCTGCTAAGGGCTGGTGCATCTGGCCAGGCCTAGCTTTGGCTCAGGCAGAATGGGGCTaGCTCTGTCACTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: ISCFPAKGWCIWPGLALAQAEWG*LCHSLW
Trigger: CCAGAGGGAGTGACAGAGGCAGCCCCATTCTGCCTG...AGCCAAAGCTAGGCCTGGCCAGATGCACCAGCCCTTAGCAGGGAAACAGCTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp ATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGCCCAGATCGCACCACTaGACGCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: IQPGEELCPQVPSSRSSVPRSHH*TPAWAT
Trigger: TGTTGCCCAGGCTGGCGTGCAGTGGTGCGATCTGGG...CACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp GACGTGGTCAGTGTCAATGGCGTGTCAGACCCTGAAGGGGCTCTAGCCCAGGAATCAGTGTCTTCTGAGTaGCCGGTGTGCCCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: DVVSVNGVSDPEGALAQESVSSE*PVCPVK
Trigger: CTTGACAGGGCACACCGGGCACTCAGAAGACACTGA...TTCCTGGGCTAGAGCCCCTTCAGGGTCTGACACGCCATTGACACTGACCACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp GCCCAGCCTGTTGCAATCTGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTTCAGTGTCTTCTGAGTaGCCGGTGTGCCCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: AQPVAIWGISRLGVAHQCSVSSE*PVCPVK
Trigger: CTTGACAGGGCACACCGGGCACTCAGAAGACACTGA...ACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCAGATTGCAACAGGCTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp TGGGCATGGGAACACGAGGTGCTACAGAGACACTGGCACCCGGCTAGGCACACAGAGGAAAAGTGCTGCTaGTTTCAGAAGGCCCCTAGC +
Preference number: 4 (lower is better)
Translates to: WAWEHEVLQRHWHPARHTEEKCC*FQKAPS
Trigger: GCTAGGGGCCTTCTGAAAGCAGCAGCACTTTTCCTC...TGTGTGCCTAGCCGGGTGCCAGTGTCTCTGTAGCACCTCGTGTTCCCATGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp AGGGCAGCTACAGCCAGACTAGCGCCTGGCTGGGACTGTCGGGGATGCGGTTTGGAGCACCTACTGCTTTaGCCTTTTAACTGGCACAAG +
Preference number: 4 (lower is better)
Translates to: RAATARLAPGWDCRGCGLEHLLL*PFNWHK
Trigger: CTTGTGCCAGTTAAAAGGGCAAAGCAGTAGGTGCTC...CAAACCGCATCCCCGACAGTCCCAGCCAGGCGCTAGTCTGGCTGTAGCTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp GAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCGGGGCCCCAACTCCATaGTGGCACACTGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: EKSCVHKYPVQGPAWLVSGAPTP*WHTVSC
Trigger: GCAGCTCACAGTGTGCCACCATGGAGTTGGGGCCCC...GGACACTAACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp ATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGCATCTGGCCGGAGGCTaGCTCCTGGTTGAACAGCGC +
Preference number: 4 (lower is better)
Translates to: IQPGEELCPQVPSSRSSVHLAGG*LLVEQR
Trigger: GCGCTGTTCAACCAGGAGCCAGCCTCCGGCCAGATG...CACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GAGGAAATGCTTGTCATCTTCTCAGCCCTGGCTGCAGCTGTGTTGATCAGCAACTTCTCCAGGCGCATCTaGCCGGAGGCTGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: EEMLVIFSALAAAVLISNFSRRI*PEAGSW
Trigger: CCAGGAGCCAGCCTCCGGCCAGATGCGCCTGGAGAA...GTTGCTGATCAACACAGCTGCAGCCAGGGCTGAGAAGATGACAAGCATTTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571186.5
CDS-3UTR CCA 90 bp GCAGGGGCCGGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGAGCTCAACGAGGAACTaGAGAAAGGCATGGGAATCT +
Preference number: 4 (lower is better)
Translates to: AGAGCQDAEAHGIQPGEESSTRN*RKAWES
Trigger: AGATTCCCATGCCTTTCTCCAGTTCCTCGTTGAGCT...CTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCGGCCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTATGGAGCGAAGGGGCTaGTGGAGCCTGGCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: LMGYSLEKSCVHKYPVQGMERRG*WSLAGL
Trigger: CAGACCGGCCAGGCTCCACCAGCCCCTTCGCTCCAT...ACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GTGACCAGCTGGAGGCACGTGGTAGACCAGGCATCTTCACAAAGCCCGCTGCTGGGACGGTTCAAGCAATaGCAGGGGACAGAGAAGACA +
Preference number: 4 (lower is better)
Translates to: VTSWRHVVDQASSQSPLLGRFKQ*QGTEKT
Trigger: TGTCTTCTCTGTCCCCTGCCATTGCTTGAACCGTCC...CAGCAGCGGGCTTTGTGAAGATGCCTGGTCTACCACGTGCCTCCAGCTGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp GTCAGGCACTCCATGGACACAAACAGCCCAATGTGGTGGGCACTGTCCCCTTTTCCTGGGCCTGCTCCATaGAGAAGCCGGACAGCTCAA +
Preference number: 4 (lower is better)
Translates to: VRHSMDTNSPMWWALSPFPGPAP*RSRTAQ
Trigger: TTGAGCTGTCCGGCTTCTCCATGGAGCAGGCCCAGG...AAAAGGGGACAGTGCCCACCACATTGGGCTGTTTGTGTCCATGGAGTGCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp ATTAGCTGTTTCCCTGCTAAGGGCTGGTGCATCTGGCCAGGCCTAGCTTTGGCTGCCCGCGGTGGGTGTTaGACTAAGCCTTTGGCCATC +
Preference number: 4 (lower is better)
Translates to: ISCFPAKGWCIWPGLALAARGGC*TKPLAI
Trigger: GATGGCCAAAGGCTTAGTCCAACACCCACCGCGGGC...AGCCAAAGCTAGGCCTGGCCAGATGCACCAGCCCTTAGCAGGGAAACAGCTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR CCA 90 bp AGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTAGGATCCGCACCAGTTTaGGGAAAGCCTGGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: SLEKSCVHKYPVQGPAWLGSAPV*GKPGGL
Trigger: CAGGCCCCCAGGCTTTCCCCAAACTGGTGCGGATCC...TAACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCTCAGTGATGTTGTTCTaGGACAGATTGAGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: VAVRNVLQRRPRGSWVDRSVMLF*DRLRVS
Trigger: GGAAACCCTCAATCTGTCCCAGAACAACATCACTGA...GCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTGCCACTCAGTGATGTTGTTCTaGGACAGATTGAGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: RNVLQRRPRGSWVDRSCHSVMLF*DRLRVS
Trigger: GGAAACCCTCAATCTGTCCCAGAACAACATCACTGA...GTGGCAGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GGAGAGGGAGGAATTCCCAGGCCGGATACACACCCCTCCCTCAGGCTTCTCCTCTGTTGCAGGTGTTCCTaGACACTGAATGGGATGGTG +
Preference number: 4 (lower is better)
Translates to: GEGGIPRPDTHPSLRLLLCCRCS*TLNGMV
Trigger: CACCATCCCATTCAGTGTCCAGGAACACCTGCAACA...GAGGAGAAGCCTGAGGGAGGGGTGTGTATCCGGCCTGGGAATTCCTCCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644232.1
CDS-3UTR CCA 90 bp CAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGTGTCCAGAGCACAGCTaGGATCATCTCAGGCTGATC +
Preference number: 4 (lower is better)
Translates to: QCLLSARCALSRCLVGEQCPEHS*DHLRLI
Trigger: GATCAGCCTGAGATGATCCCAGCTGTGCTCTGGACA...CTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GGCAGGAATATTGCAGAAGTGAGTGTGTGTCTTCAGTGCATCTTATCGAGAGGCAGGCCTCGGGGCTCCTaGGTGGACCGCAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GRNIAEVSVCLQCILSRGRPRGS*VDRSCH
Trigger: GTGGCAGCTGCGGTCCACCCAGGAGCCCCGAGGCCT...GCCTCTCGATAAGATGCACTGAAGACACACACTCACTTCTGCAATATTCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp CCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCTCAGAGAACATGCCCCTCTGGCCTGGCCGTaGCTGTCCGCAATGTCCTTC +
Preference number: 4 (lower is better)
Translates to: PQVPSSRSSVVSVLREHAPLAWP*LSAMSF
Trigger: GAAGGACATTGCGGACAGCCACGGCCAGGCCAGAGG...GGCATGTTCTCTGAGGACACTAACCACGCTGGACCTTGAACTGGGTACTTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp AGACAGGCTAAATGCAGATCTCACAGCATTTGCCCTGAGGAGCAGGACAGCGGGCCCTGTCAAGGTGTCTaGTCGGAGAGCAGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: RQAKCRSHSICPEEQDSGPCQGV*SESRVE
Trigger: CTCCACCCTGCTCTCCGACCAGACACCTTGACAGGG...CCCGCTGTCCTGCTCCTCAGGGCAAATGCTGTGAGATCTGCATTTAGCCTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp GCCCAGCCTGTTGCAATCTGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCAGCCTGTTGCAATCTaGGGAATTAGCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: AQPVAIWGISRLGVAHQCQPVAI*GISRLG
Trigger: CCCCAGCCTGCTAATTCCCCAGATTGCAACAGGCTG...ACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCAGATTGCAACAGGCTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp TGGGGTCACCTCCCTGTCCTCGACTCACTGTGTGACTTCAGGCAGAGGTCACCACCCCTCCTTTCTTTTTaGGACACCCTCCAACCCAGC +
Preference number: 4 (lower is better)
Translates to: WGHLPVLDSLCDFRQRSPPLLSF*DTLQPS
Trigger: GCTGGGTTGGAGGGTGTCCCAAAAAGAAAGGAGGGG...TGGTGACCTCTGCCTGAAGTCACACAGTGAGTCGAGGACAGGGAGGTGACCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp GCTTCCAGTCTGTTCCCCTCTCACCGCCCCATTAGTGTCCCATTAGCTGTTTCCGGACTTGAGCCAAGGTaGGCTCTGGTGTGTGCACGC +
Preference number: 4 (lower is better)
Translates to: ASSLFPSHRPISVPLAVSGLEPR*ALVCAR
Trigger: GCGTGCACACACCAGAGCCCACCTTGGCTCAAGTCC...GGAAACAGCTAATGGGACACTAATGGGGCGGTGAGAGGGGAACAGACTGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp CTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTCTAGGCAGAACCTTGTaGCTGACAAACAGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: LSAMSFREGLGAPGWTAALGRTL*LTNSRR
Trigger: TCTTCTGCTGTTTGTCAGCCACAAGGTTCTGCCTAG...AGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp GCTTTGGCCAACAATGTCAGTGCATTGAGTCCCATAGACAAAAGCAGCTGCCACCCCCAGCCAACCTGGTaGCAGGGTGGGGCTTCCGTG +
Preference number: 4 (lower is better)
Translates to: ALANNVSALSPIDKSSCHPQPTW*QGGASV
Trigger: CACGGAAGCCCCACCCTGCCACCAGGTTGGCTGGGG...GTGGCAGCTGCTTTTGTCTATGGGACTCAATGCACTGACATTGTTGGCCAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp AGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTACAAGCCTCCCGAGCCTaGTGGATTGGTCCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: SLEKSCVHKYPVQGPAWLQASRA*WIGPCP
Trigger: GGGACAGGGACCAATCCACCAGGCTCGGGAGGCTTG...TAACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp AGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGCCTAAATTTGAGGGATaGAGGAAGACTTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: RLGVAHQCLLSARCALSRPKFEG*RKTSLP
Trigger: GGGCAGGGAAGTCTTCCTCCATCCCTCAAATTTAGG...CCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp TACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTCAGCCCTCAGACCCTaGGTGACTCCTGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: YSLEKSCVHKYPVQGPAWSALRP*VTPEQA
Trigger: AGCCTGCTCAGGAGTCACCCAGGGTCTGAGGGCTGA...CCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp AGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGATGCATGGGTCTCAATaGAAACAGTTCCGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: RLGVAHQCLLSARCALSRMHGSQ*KQFRPL
Trigger: AAGGGGGCGGAACTGTTTCCATTGAGACCCATGCAT...CCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp CAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGCTTCCTCCTGAGGACTaGTTACCAAGGAGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: QCLLSARCALSRCLVGEQLPPED*LPRRVC
Trigger: ACACACCCTCCTTGGTAACCAGTCCTCAGGAGGAAG...CTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp GATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCCCTTCCCCCTTTCCTTaGGTGCCCTTCCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: DAEAHGIQPGEELCPQVPPSPFP*VPFLLR
Trigger: CCTCAGGAGGAAGGGCACCCAAGGAAAGGGGGAAGG...GGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp TGTTCCTTAACTCTAGGATGCAGGTTCCGTAGTGGGCGGACCTTCCAGCAACCAAGGATGAGGGCGGGTTaGGGCGCTAGCAAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: CSLTLGCRFRSGRTFQQPRMRAG*GASKGE
Trigger: CTCTCCCTTGCTAGCGCCCCAACCCGCCCTCATCCT...TGGTTGCTGGAAGGTCCGCCCACTACGGAACCTGCATCCTAGAGTTAAGGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644232.1
CDS-3UTR TCA 90 bp TGGGGTCACCTCCCTGTCCTCGACTCACTGTGTGACTTCAGGCAGAGGTCACCAGTGCTCTGTCATCCCTaGGCTCTCAAAGTAGCGCAT +
Preference number: 4 (lower is better)
Translates to: WGHLPVLDSLCDFRQRSPVLCHP*ALKVAH
Trigger: ATGCGCTACTTTGAGAGCTCAGGGATGACAGAGCAC...TGGTGACCTCTGCCTGAAGTCACACAGTGAGTCGAGGACAGGGAGGTGACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp GGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCAGTGCTCTGTCATCCCTaGGCTCTCAAAGTAGCGCAT +
Preference number: 4 (lower is better)
Translates to: GCQDAEAHGIQPGEELCPVLCHP*ALKVAH
Trigger: ATGCGCTACTTTGAGAGCTCAGGGATGACAGAGCAC...TGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR TCA 90 bp CTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTGGGAGGAAAAGGCCGTaGGGATCCGCACCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: LRLMGYSLEKSCVHKYPVGRKRP*GSAPVW
Trigger: CCAAACTGGTGCGGATCCTCACGGCCTTTTCCTCCC...AACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp AGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTAGGGAGGAAAAGGCCGTaGGGATCCGCACCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: SLEKSCVHKYPVQGPAWLGRKRP*GSAPVW
Trigger: CCAAACTGGTGCGGATCCTCACGGCCTTTTCCTCCC...TAACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp CAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTTGTACAAGCTTAGCCTaGGCAGGGATGCAGCGAGCG +
Preference number: 4 (lower is better)
Translates to: QPGEELCPQVPSSRSSVVCTSLA*AGMQRA
Trigger: CGCTCGCTGCATCCCTGCTCAGGCTAAGCTTGTACA...AACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp ATTCCACGTGTAGCCCATTCAGACTGGAGATCTGCACACAAGAGGGCAGCTACAGCCAGCGTCTCCACATaGGGACACCTCCGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: IPRVAHSDWRSAHKRAATASVST*GHLRRL
Trigger: CAGCCTTCGGAGGTGTCCTCATGTGGAGACGCTGGC...TGTAGCTGCCCTCTTGTGTGCAGATCTCCAGTCTGAATGGGCTACACGTGGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp CCCAGGTCAGTGATGTTGTTCTGGGACAGATTGAGGGTTTCCAAGGACTTCAGCGCCAGCGTCTCCACATaGGGACACCTCCGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: PRSVMLFWDRLRVSKDFSASVST*GHLRRL
Trigger: CAGCCTTCGGAGGTGTCCTCATGTGGAGACGCTGGC...GCTGAAGTCCTTGGAAACCCTCAATCTGTCCCAGAACAACATCACTGACCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618207.4
CDS-3UTR TCA 90 bp GAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCGGTGTTCCTGGACACTaGATGGGATGGTGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: EKSCVHKYPVQGPAWLVSGVPGH*MGWWAS
Trigger: GGACGCCCACCATCCCATTCAGTGTCCAGGAACACC...GGACACTAACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp TCCCAGCTCCACCAACACCTCAGACTTCATCTCCTAAGCCTCGGTTTCCTTCTCGGTGTTCCTGGACACTaGATGGGATGGTGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: SQLHQHLRLHLLSLGFLLGVPGH*MGWWAS
Trigger: GGACGCCCACCATCCCATTCAGTGTCCAGGAACACC...GAGAAGGAAACCGAGGCTTAGGAGATGAAGTCTGAGGTGTTGGTGGAGCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000644232.1
ENST00000646979.1
CDS-3UTR TCA 90 bp CTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCGGGTGCCAGGATGCTaGGGCTCATGGGATACAGCC +
Preference number: 4 (lower is better)
Translates to: LMGYSLEKSCVHKYPVQGRVPGC*GSWDTA
Trigger: GGCTGTATCCCATGAGCCTCAGCATCCTGGCACCCG...ACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp CATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGTTGAATTGGGGCTTCTaGGCAGACTATGCCCGAGTG +
Preference number: 4 (lower is better)
Translates to: HQCLLSARCALSRCLVGELNWGF*ADYARV
Trigger: CACTCGGGCATAGTCTGCTCAGAAGCCCCAATTCAA...CTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp CGCAGCAGCGGATCAGATCAGCTCTCAGGGCCCCGACACCCCCTGAGCACCTACAAGAGAGGGATTAAATaGGTGGAATTGGGAGCTTGT +
Preference number: 4 (lower is better)
Translates to: RSSGSDQLSGPRHPLSTYKRGIK*VELGAC
Trigger: ACAAGCTCCCAATTCCACTCATTTAATCCCTCTCTT...GTAGGTGCTCAGGGGGTGTCGGGGCCCTGAGAGCTGATCTGATCCGCTGCTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp CATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCCTGGCCTTGGCTTCTaGTTATTTGCAGCTGCGATG +
Preference number: 4 (lower is better)
Translates to: HQCLLSARCALSRCLVGEPGLGF*LFAAAM
Trigger: CATCGCAGCTGCAAATAATCAGAAGCCAAGGCCAGG...CTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp AGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGCTATCCACACAAATCTaGGATGGGCTCAAGGATGAC +
Preference number: 4 (lower is better)
Translates to: RLGVAHQCLLSARCALSRLSTQI*DGLKDD
Trigger: GTCATCCTTGAGCCCATCTCAGATTTGTGTGGATAG...CCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp GTGACCAGCTGGAGGCACGTGGTAGACCAGGCATCTTCACAAAGCCCGCTGCTGTCAGCCTGGGGCTCTTaGTGCCTTAGAAGAAACTTG +
Preference number: 4 (lower is better)
Translates to: VTSWRHVVDQASSQSPLLSAWGS*CLRRNL
Trigger: CAAGTTTCTTCTAAGGCATCAAGAGCCCCAGGCTGA...CAGCAGCGGGCTTTGTGAAGATGCCTGGTCTACCACGTGCCTCCAGCTGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp GACGTGGTCAGTGTCAATGGCGTGTCAGACCCTGAAGGGGCTCTAGCCCAGGAATCAGATACCCATCTATaGGGTGGCAGCATTGGGCTC +
Preference number: 4 (lower is better)
Translates to: DVVSVNGVSDPEGALAQESDTHL*GGSIGL
Trigger: GAGCCCAATGCTGCCACCTCATAGATGGGTATCTGA...TTCCTGGGCTAGAGCCCCTTCAGGGTCTGACACGCCATTGACACTGACCACGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp CAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGACTTTGATCAGTTGGTaGAGGTGGTGTCTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: QCLLSARCALSRCLVGEQTLISW*RWCLPG
Trigger: ACCTGGCAGACACCACCTTCACCAACTGATCAAAGT...CTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp AGGGCAGCTACAGCCAGACTAGCGCCTGGCTGGGACTGTCGGGGATGCGGTTTGGGAATATTGCAGAAGTaGGTGTGTGTCTTCAGTGCA +
Preference number: 4 (lower is better)
Translates to: RAATARLAPGWDCRGCGLGILQK*VCVFSA
Trigger: TGCACTGAAGACACACACTCACTTCTGCAATATTCC...CAAACCGCATCCCCGACAGTCCCAGCCAGGCGCTAGTCTGGCTGTAGCTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp TACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTGGCACACTGTGAGCTaGCTTGGGGCTCTGACAGGT +
Preference number: 4 (lower is better)
Translates to: YSLEKSCVHKYPVQGPAWWHTVS*LGALTG
Trigger: ACCTGTCAGAGCCCCAAGGCAGCTCACAGTGTGCCA...CCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp GCTTCCAGTCTGTTCCCCTCTCACCGCCCCATTAGTGTCCCATTAGCTGTTTCCCCAGTGCTTCAGGTCTaGCGGAAGCTCCTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: ASSLFPSHRPISVPLAVSPVLQV*RKLLWE
Trigger: TTCCCAGAGGAGCTTCCGGCAGACCTGAAGCACTGG...GGAAACAGCTAATGGGACACTAATGGGGCGGTGAGAGGGGAACAGACTGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp GATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCCCAGCCTCAGAGATTTaGCAGAGCCCATGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: DAEAHGIQPGEELCPQVPPASEI*QSPWGR
Trigger: TCTGCCCCATGGGCTCTGGCAAATCTCTGAGGCTGG...GGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp GATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCGTGCTCTGTCATGTTTaGTCGGGAGGTCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: DAEAHGIQPGEELCPQVPVLCHV*SGGQGR
Trigger: CCTGCCCTGACCTCCCGAGCAAACATGACAGAGCAC...GGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp GCTTTGGCCAACAATGTCAGTGCATTGAGTCCCATAGACAAAAGCAGCTGCCACGGAGACCTCTCCAGCTaGCGGGCATTGGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: ALANNVSALSPIDKSSCHGDLSS*RALGGG
Trigger: TCCCCCACCCAATGCCCGGCAGCTGGAGAGGTCTCC...GTGGCAGCTGCTTTTGTCTATGGGACTCAATGCACTGACATTGTTGGCCAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp TACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGGTAGCGCATCACGTATaGCTGGGCCTGCTCCATGGA +
Preference number: 4 (lower is better)
Translates to: YSLEKSCVHKYPVQGPAWVAHHV*LGLLHG
Trigger: TCCATGGAGCAGGCCCAGGCATACGTGATGCGCTAC...CCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp GAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCGGGTACTTTGATGTCTaGGGCCCAGCTCCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: EKSCVHKYPVQGPAWLVSGYFDV*GPAPRP
Trigger: TGGCCTGGGAGCTGGGCCGCAGACATCAAAGTACCC...GGACACTAACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp AGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTACCAGGTCCTCACGTCTaGGGATGGGAACTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: SLEKSCVHKYPVQGPAWLPGPHV*GWELVL
Trigger: GAGGACCAGTTCCCATCCGCAGACGTGAGGACCTGG...TAACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp GAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCGCCCCCAGGAAGCATTaGAGGAGGAAGCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: EKSCVHKYPVQGPAWLVSAPRKH*RRKLGK
Trigger: CTTCCCCAGCTTCCTCCTGCAATGCTTCCTGGGGGC...GGACACTAACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp CATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGGTCAATGCTAGGTACTaGGGGAGCTCCTTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: HQCLLSARCALSRCLVGEVNARY*GSSLSL
Trigger: CAAGGACAAGGAGCTCCCGCAGTACCTAGCATTGAC...CTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp GAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCAGCTTGGTCTCCCCATaGTGCTGCAGGGACTCCCAC +
Preference number: 4 (lower is better)
Translates to: EKSCVHKYPVQGPAWLVSSLVSP*CCRDSH
Trigger: GTGGGAGTCCCTGCAGCAGCATGGGGAGACCAAGCT...GGACACTAACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618327.4
CDS-3UTR GCA 90 bp CAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTTCCAGGTCCAGATGCTaGAGGGAGGAAAAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: QPGEELCPQVPSSRSSVVSRSRC*REEKAV
Trigger: CACGGCCTTTTCCTCCCTGCAGCATCTGGACCTGGA...AACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp CTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTAAGGTGGCTGAGAGCTaGGAGACACCCTCGTCCCCG +
Preference number: 4 (lower is better)
Translates to: LMGYSLEKSCVHKYPVQGKVAES*ETPSSP
Trigger: CGGGGACGAGGGTGTCTCGCAGCTCTCAGCCACCTT...ACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp CTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTCTCCCACGTCGCAGATaGAGTTATTGTACAAGCTTA +
Preference number: 4 (lower is better)
Translates to: LSAMSFREGLGAPGWTAALPRRR*SYCTSL
Trigger: TAAGCTTGTACAATAACTGCATCTGCGACGTGGGAG...AGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp GGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCATGTCCTCAGAGAACATaGCTGTCCAGAGCACAGCTG +
Preference number: 4 (lower is better)
Translates to: GCQDAEAHGIQPGEELCPCPQRT*LSRAQL
Trigger: CAGCTGTGCTCTGGACAGGCATGTTCTCTGAGGACA...TGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp CCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCTCAGAGAACATGCCCAGGCAGAATGGGGCTaGCTCTGTCACTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PQVPSSRSSVVSVLREHAQAEWG*LCHSLW
Trigger: CCAGAGGGAGTGACAGAGGCAGCCCCATTCTGCCTG...GGCATGTTCTCTGAGGACACTAACCACGCTGGACCTTGAACTGGGTACTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp AGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCAGGCAGAATGGGGCTaGCTCTGTCACTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: RMLRLMGYSLEKSCVHKYQAEWG*LCHSLW
Trigger: CCAGAGGGAGTGACAGAGGCAGCCCCATTCTGCCTG...GTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp ATTAGCTGTTTCCCTGCTAAGGGCTGGTGCATCTGGCCAGGCCTAGCTTTGGCTTCTGAGTGCCCGGTGTaGCCTGTCAAGGTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: ISCFPAKGWCIWPGLALASECPV*PVKVSG
Trigger: ACCAGACACCTTGACAGGGCACACCGGGCACTCAGA...AGCCAAAGCTAGGCCTGGCCAGATGCACCAGCCCTTAGCAGGGAAACAGCTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp GGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACTGAGTAAAGGATTCTaGTTCAGGCTGCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GCQDAEAHGIQPGEELCPLSKGF*FRLLAS
Trigger: GCTGGCCAGCAGCCTGAAGCAGAATCCTTTACTCAG...TGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp GATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCTGGGACTGTCGGGGATaGGGTTTGTGGTCACAGGAC +
Preference number: 4 (lower is better)
Translates to: DAEAHGIQPGEELCPQVPWDCRG*GLWSQD
Trigger: GTCCTGTGACCACAAACCGCATCCCCGACAGTCCCA...GGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp GGGGTCCTAGCCAACTATTCCGTAGTGGCACTGAGGCCCCCAGCCAACAGCCAGAGGCACCTGCCACCATaGCCAGCGAATTTTGTATTT +
Preference number: 4 (lower is better)
Translates to: GVLANYSVVALRPPANSQRHLPP*PANFVF
Trigger: AAATACAAAATTCGCTGGGCATGGTGGCAGGTGCCT...CTGGCTGTTGGCTGGGGGCCTCAGTGCCACTACGGAATAGTTGGCTAGGACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp CCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCTCAGAGAACATGCCGGGACCTCAGGCACCTaGCACCATGCCCAGCGAATT +
Preference number: 4 (lower is better)
Translates to: PQVPSSRSSVVSVLREHAGTSGT*HHAQRI
Trigger: AATTCGCTGGGCATGGTGGCAGGTGCCTGAGGTCCC...GGCATGTTCTCTGAGGACACTAACCACGCTGGACCTTGAACTGGGTACTTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp AGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGACCAGGCAGCTTCTCTaGAGAGTTACTGAGCTAAGA +
Preference number: 4 (lower is better)
Translates to: RLGVAHQCLLSARCALSRTRQLL*RVTELR
Trigger: TCTTAGCTCAGTAACTCTGCAGAGAAGCTGCCTGGT...CCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp GATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCGCCCCAACTCCATGGTaGCACACTGTGAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: DAEAHGIQPGEELCPQVPAPTPW*HTVSCL
Trigger: AAGGCAGCTCACAGTGTGCCACCATGGAGTTGGGGC...GGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GAGCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGTCCTGGAAGACATACTaGTCCAGTTCCGCGATATTG +
Preference number: 4 (lower is better)
Translates to: EQDVVHSAAGQGPTLNQQSWKTY*SSSAIL
Trigger: CAATATCGCGGAACTGGACCAGTATGTCTTCCAGGA...CTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCATGCCGGAAGCTCCTCTaGGAAGGGTCTTTTCTGACT +
Preference number: 4 (lower is better)
Translates to: GCQDAEAHGIQPGEELCPCRKLL*EGSFLT
Trigger: AGTCAGAAAAGACCCTTCCCAGAGGAGCTTCCGGCA...TGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp AACCAGAGCAGTGGGTACCCCAAAATGGTAACAGGGTATGAACTCAAACCCTGGGCAGGCAGGGCAGGGTaGAGCAGTCGCTCACTGGTC +
Preference number: 4 (lower is better)
Translates to: NQSSGYPKMVTGYELKPWAGRAG*SSRSLV
Trigger: GACCAGTGAGCGACTGCTCCACCCTGCCCTGCCTGC...CCAGGGTTTGAGTTCATACCCTGTTACCATTTTGGGGTACCCACTGCTCTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp TCAGGCAGCTCAACGAGGAACTGGAGAAAGGCATGGGAATCTGGTCGGTTTTCTCATCTGGCCGGAGGCTaGCTCCTGGTTGAACAGCGC +
Preference number: 4 (lower is better)
Translates to: SGSSTRNWRKAWESGRFSHLAGG*LLVEQR
Trigger: GCGCTGTTCAACCAGGAGCCAGCCTCCGGCCAGATG...AGAAAACCGACCAGATTCCCATGCCTTTCTCCAGTTCCTCGTTGAGCTGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571186.5
CDS-3UTR CCA 90 bp AGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGAGCTCAACGAGGAACTaGAGAAAGGCATGGGAATCT +
Preference number: 4 (lower is better)
Translates to: RLGVAHQCLLSARCALSRSSTRN*RKAWES
Trigger: AGATTCCCATGCCTTTCTCCAGTTCCTCGTTGAGCT...CCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp TCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGGGTGGAGCTCAACGAGGAACTaGAGAAAGGCATGGGAATCT +
Preference number: 4 (lower is better)
Translates to: SSECPVCPVKVSGRRAGWSSTRN*RKAWES
Trigger: AGATTCCCATGCCTTTCTCCAGTTCCTCGTTGAGCT...CCACCCTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp ATTAGCTGTTTCCCTGCTAAGGGCTGGTGCATCTGGCCAGGCCTAGCTTTGGCTCCGGTCTGGAGATGTTaGGAGGCCGTGGACAGTGAA +
Preference number: 4 (lower is better)
Translates to: ISCFPAKGWCIWPGLALAPVWRC*EAVDSE
Trigger: TTCACTGTCCACGGCCTCCCAACATCTCCAGACCGG...AGCCAAAGCTAGGCCTGGCCAGATGCACCAGCCCTTAGCAGGGAAACAGCTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp AGTGGGTACCCCAAAATGGTAACAGGGTATGAACTCAAACCCTGGACCTGCCTGTGCTGGGCAGGTCAGTaGCTGATGGAGCGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: SGYPKMVTGYELKPWTCLCWAGQ*LMERRG
Trigger: GCCCCTTCGCTCCATCAGCCACTGACCTGCCCAGCA...CAGGCAGGTCCAGGGTTTGAGTTCATACCCTGTTACCATTTTGGGGTACCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTCAGGTTCAGGCATGCTaGGCAGGTCAGTGGCTGATG +
Preference number: 4 (lower is better)
Translates to: QPGEELCPQVPSSRSSVVQVQAC*AGQWLM
Trigger: CATCAGCCACTGACCTGCCCAGCATGCCTGAACCTG...AACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp AGCAGAGCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAATTTTGGAAGCTTGTTaGAGACCTCTCCAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SRARCGSFRSRAGANPEPILEAC*RPLQLP
Trigger: CGGCAGCTGGAGAGGTCTCCAACAAGCTTCCAAAAT...TGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGCTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp TACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCTCAGAGAACATGCCTGTCCAGCGGAGCAGCTTCTTCTaGAAAAGGCCGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: YPVQGPAWLVSSENMPVQRSSFF*KRPASS
Trigger: GCTGCTGGCCGGCCTTTTCCAGAAGAAGCTGCTCCG...CTGGACAGGCATGTTCTCTGAGGACACTAACCACGCTGGACCTTGAACTGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR CCA 90 bp TACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCTCAGAGAACATGCCTGTCCAGGTGACTGAGAAGAAGTaGCCGGTCCCGGAGGAGCGT +
Preference number: 4 (lower is better)
Translates to: YPVQGPAWLVSSENMPVQVTEKK*PVPEER
Trigger: ACGCTCCTCCGGGACCGGCCACTTCTTCTCAGTCAC...CTGGACAGGCATGTTCTCTGAGGACACTAACCACGCTGGACCTTGAACTGGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR CCA 90 bp AACCAGAGCAGTGGGTACCCCAAAATGGTAACAGGGTATGAACTCAAACCCTGGGCGTGGAGGGCAGCTTaGCGTCCTCCCCAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: NQSSGYPKMVTGYELKPWAWRAA*RPPQAP
Trigger: TGGAGCTTGGGGAGGACGCCAAGCTGCCCTCCACGC...CCAGGGTTTGAGTTCATACCCTGTTACCATTTTGGGGTACCCACTGCTCTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR CCA 90 bp GTACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCTCAGAGAACATGCCTGTCCATCAGCTGGGGGAAGGTaGCTGAGAGCTGCGAGACAC +
Preference number: 4 (lower is better)
Translates to: VPSSRSSVVSVLREHACPSAGGR*LRAARH
Trigger: GTGTCTCGCAGCTCTCAGCCACCTTCCCCCAGCTGA...TGGACAGGCATGTTCTCTGAGGACACTAACCACGCTGGACCTTGAACTGGGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GATGACCTTGGCTTTTGGGGGATTCTCGCTTGTCATGCTTTGCAGTTGGACATAGACACCTCCGAAGGCTaGCAGCGAGCTGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: DDLGFWGILACHALQLDIDTSEG*QRAAGP
Trigger: GGGCCCAGCAGCTCGCTGCCAGCCTTCGGAGGTGTC...TATGTCCAACTGCAAAGCATGACAAGCGAGAATCCCCCAAAAGCCAAGGTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644232.1
CDS-3UTR CCA 90 bp GGCAGGAATATTGCAGAAGTGAGTGTGTGTCTTCAGTGCATCTTATCGAGAGGCGACACCTCCGAAGGCTaGCAGCGAGCTGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: GRNIAEVSVCLQCILSRGDTSEG*QRAAGP
Trigger: GGGCCCAGCAGCTCGCTGCCAGCCTTCGGAGGTGTC...GCCTCTCGATAAGATGCACTGAAGACACACACTCACTTCTGCAATATTCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000646979.1
CDS-3UTR CCA 90 bp CAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGTCATGGGATACAGCCTaGAGAAGAGCTGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: QCLLSARCALSRCLVGEQSWDTA*RRAVST
Trigger: TGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGA...CTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp TACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGCAGCAGAGCAAGATGTaGTTCATTCCGCAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: YSLEKSCVHKYPVQGPAWQQSKM*FIPQPG
Trigger: GCCCGGCTGCGGAATGAACCACATCTTGCTCTGCTG...CCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CCCAGGTCAGTGATGTTGTTCTGGGACAGATTGAGGGTTTCCAAGGACTTCAGCCCTCTGGCCTGGCCGTaGCTGTCCGCAATGTCCTTC +
Preference number: 4 (lower is better)
Translates to: PRSVMLFWDRLRVSKDFSPLAWP*LSAMSF
Trigger: GAAGGACATTGCGGACAGCCACGGCCAGGCCAGAGG...GCTGAAGTCCTTGGAAACCCTCAATCTGTCCCAGAACAACATCACTGACCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618207.4
CDS-3UTR CCA 90 bp AGTGGGTACCCCAAAATGGTAACAGGGTATGAACTCAAACCCTGGACCTGCCTGTCACTCCCTCTGGCCTaGCCGTGGCTGTCCGCAATG +
Preference number: 4 (lower is better)
Translates to: SGYPKMVTGYELKPWTCLSLPLA*PWLSAM
Trigger: CATTGCGGACAGCCACGGCCAGGCCAGAGGGAGTGA...CAGGCAGGTCCAGGGTTTGAGTTCATACCCTGTTACCATTTTGGGGTACCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CCCAGCCTGTTGCAATCTGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCGGTCGGAGAGCAGGGTaGAGAAGTACTTTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: PSLLQSGELAGWGLPISVGRRAG*RSTFSV
Trigger: CACAGAGAAAGTACTTCTCCACCCTGCTCTCCGACC...GACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCAGATTGCAACAGGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp TACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTCCCTGCTAAGGGCTaGTGCATCTGGCCAGGCCTA +
Preference number: 4 (lower is better)
Translates to: YSLEKSCVHKYPVQGPAWFPAKG*CIWPGL
Trigger: TAGGCCTGGCCAGATGCACCAGCCCTTAGCAGGGAA...CCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp AGGGCAGCTACAGCCAGACTAGCGCCTGGCTGGGACTGTCGGGGATGCGGTTTGCAATCCTTGTCACACTaGCCAACAGAATATGGCAGA +
Preference number: 4 (lower is better)
Translates to: RAATARLAPGWDCRGCGLQSLSH*PTEYGR
Trigger: TCTGCCATATTCTGTTGGCCAGTGTGACAAGGATTG...CAAACCGCATCCCCGACAGTCCCAGCCAGGCGCTAGTCTGGCTGTAGCTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp TGGGCATGGGAACACGAGGTGCTACAGAGACACTGGCACCCGGCTAGGCACACATGGCACATGGCACAGTaGATGATCAGAGCACACCTT +
Preference number: 4 (lower is better)
Translates to: WAWEHEVLQRHWHPARHTWHMAQ*MIRAHL
Trigger: AAGGTGTGCTCTGATCATCCACTGTGCCATGTGCCA...TGTGTGCCTAGCCGGGTGCCAGTGTCTCTGTAGCACCTCGTGTTCCCATGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp GAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCCAGGCGGCAGAACTCTaGGGGGAGACAGTTGGAGCA +
Preference number: 4 (lower is better)
Translates to: EKSCVHKYPVQGPAWLVSQAAEL*GETVGA
Trigger: TGCTCCAACTGTCTCCCCCCAGAGTTCTGCCGCCTG...GGACACTAACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp TGGGGTCACCTCCCTGTCCTCGACTCACTGTGTGACTTCAGGCAGAGGTCACCAGTCTGGGGCTCCCAGTaGTTCCCTAAATTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: WGHLPVLDSLCDFRQRSPVWGSQ*FPKFEG
Trigger: TCCCTCAAATTTAGGGAACCACTGGGAGCCCCAGAC...TGGTGACCTCTGCCTGAAGTCACACAGTGAGTCGAGGACAGGGAGGTGACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp TCCCAGCTCCACCAACACCTCAGACTTCATCTCCTAAGCCTCGGTTTCCTTCTCCGGGGATGCGGTTTGTaGTCACAGGACTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SQLHQHLRLHLLSLGFLLRGCGL*SQDWER
Trigger: CCTCTCCCAGTCCTGTGACCACAAACCGCATCCCCG...GAGAAGGAAACCGAGGCTTAGGAGATGAAGTCTGAGGTGTTGGTGGAGCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp TGTCTGGTCGGAGAGCAGGGTGGAGAAGTACTTTCTCTGTGGCCCGGTGCAGTGAACAGCCCAATGTGGTaGGCACTGTCCCCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: CLVGEQGGEVLSLWPGAVNSPMW*ALSPFP
Trigger: TGGAAAAGGGGACAGTGCCCACCACATTGGGCTGTT...CACTGCACCGGGCCACAGAGAAAGTACTTCTCCACCCTGCTCTCCGACCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp CAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTAGCCTGTCACCAGCGTaGAGGATCAGAATGGCTGCG +
Preference number: 4 (lower is better)
Translates to: QPGEELCPQVPSSRSSVVSLSPA*RIRMAA
Trigger: CGCAGCCATTCTGATCCTCCACGCTGGTGACAGGCT...AACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp GTACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCTCAGAGAACATGCCTGTCCAATGAGGTGGCAGCATTaGGCTCCTGGCCACGCTGTC +
Preference number: 4 (lower is better)
Translates to: VPSSRSSVVSVLREHACPMRWQH*APGHAV
Trigger: GACAGCGTGGCCAGGAGCCCAATGCTGCCACCTCAT...TGGACAGGCATGTTCTCTGAGGACACTAACCACGCTGGACCTTGAACTGGGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp AGAGGGAGGAATTCCCAGGCCGGATACACACCCCTCCCTCAGGCTTCTCCTCCGGATGACCTTGGCTTTTaGGGGATTCTCGCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: RGRNSQAGYTPLPQASPPDDLGF*GILACH
Trigger: ATGACAAGCGAGAATCCCCCAAAAGCCAAGGTCATC...CGGAGGAGAAGCCTGAGGGAGGGGTGTGTATCCGGCCTGGGAATTCCTCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644232.1
3UTR CAA 72 bp CCTGCTAAGGGCTGGTGCATCTGGCCAGGCCTAGCTTaGGCTTTGGCCAACAATGTCAGTGCATTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: PAKGWCIWPGLA*ALANNVSALSP
Trigger: GGGACTCAATGCACTGACATTGTTGGCCAAAGCCAAAGCTAGGCCTGGCCAGATGCACCAGCCCTTAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
3UTR CAA 72 bp GACTCATCTCAGATACCCATCTATGAGGTGGCAGCATaGGGCTCCTGGCCACGCTGTCCTGATGTTTCCCCC +
Preference number: 4 (lower is better)
Translates to: DSSQIPIYEVAA*GSWPRCPDVSP
Trigger: GGGGGAAACATCAGGACAGCGTGGCCAGGAGCCCAATGCTGCCACCTCATAGATGGGTATCTGAGATGAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp CAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGGGGAAGGGTCTTTTCTaGCTTTTCTGCCCAACTTCT +
Preference number: 4 (lower is better)
Translates to: QCLLSARCALSRCLVGEQGKGLF*LFCPTS
Trigger: AGAAGTTGGGCAGAAAAGTCAGAAAAGACCCTTCCC...CTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp CAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTATACGTGTCCTGCAGTaGGCGGTAGAACTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: QPGEELCPQVPSSRSSVVIRVLQ*AVELLH
Trigger: GTGGAGCAGTTCTACCGCTCACTGCAGGACACGTAT...AACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR TCA 90 bp TACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGATACGTGTCCTGCAGTaGGCGGTAGAACTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: YSLEKSCVHKYPVQGPAWIRVLQ*AVELLH
Trigger: GTGGAGCAGTTCTACCGCTCACTGCAGGACACGTAT...CCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR TCA 90 bp CTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCGAAGCCGTCTAGGATaGGCAGAACGCGGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: LMGYSLEKSCVHKYPVQGRSRLG*AERGQV
Trigger: GACCTGACCGCGTTCTGCTCATCCTAGACGGCTTCG...ACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR TCA 90 bp TCCCAGCTCCACCAACACCTCAGACTTCATCTCCTAAGCCTCGGTTTCCTTCTCTCCTGTAGGGTACTTTaGTGTCTGCGGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SQLHQHLRLHLLSLGFLLSCRVL*CLRPSS
Trigger: GGAGCTGGGCCGCAGACATCAAAGTACCCTACAGGA...GAGAAGGAAACCGAGGCTTAGGAGATGAAGTCTGAGGTGTTGGTGGAGCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp ATTAGCTGTTTCCCTGCTAAGGGCTGGTGCATCTGGCCAGGCCTAGCTTTGGCTTTCTCCTCTGCTGCCTaGAGTAGCTTGGTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: ISCFPAKGWCIWPGLALAFSSAA*SSLVSP
Trigger: TGGGGAGACCAAGCTACTTCAGGCAGCAGAGGAGAA...AGCCAAAGCTAGGCCTGGCCAGATGCACCAGCCCTTAGCAGGGAAACAGCTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR TCA 90 bp CCCAGCCTGTTGCAATCTGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCGGGATCATCTCAGGCTaGTCCGTGAATCCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: PSLLQSGELAGWGLPISVGIISG*SVNPVV
Trigger: AACAACAGGATTCACGGATCAGCCTGAGATGATCCC...GACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCAGATTGCAACAGGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp ATATTAGATAACCAGAGCAGTGGGTACCCCAAAATGGTAACAGGGTATGAACTCGGCAGGGGCCAACCCTaGACCAGCAGGGGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: ILDNQSSGYPKMVTGYELGRGQP*TSRGRV
Trigger: CACCCGGCCCCTGCTGGTTCAGGGTTGGCCCCTGCC...GAGTTCATACCCTGTTACCATTTTGGGGTACCCACTGCTCTGGTTATCTAATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp TGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCATGTTTTAAGCCACTATaGTTTGGGGTGGCTTGTTAC +
Preference number: 4 (lower is better)
Translates to: WLSAMSFREGLGAPGWTACFKPL*FGVACY
Trigger: GTAACAAGCCACCCCAAATCATAGTGGCTTAAAACA...TGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp TACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGGGCTGCAGTGAGCCGTaGTCATACCACTGCATTCCA +
Preference number: 4 (lower is better)
Translates to: YSLEKSCVHKYPVQGPAWGCSEP*SYHCIP
Trigger: TGGAATGCAGTGGTATGATCACGGCTCACTGCAGCC...CCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp AGACAGGCTAAATGCAGATCTCACAGCATTTGCCCTGAGGAGCAGGACAGCGGGGGCAGGAGAATCACTTaGGGCCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: RQAKCRSHSICPEEQDSGGRRIT*GQEFKT
Trigger: GGTCTTGAACTCCTGGCCTCAAGTGATTCTCCTGCC...CCCGCTGTCCTGCTCCTCAGGGCAAATGCTGTGAGATCTGCATTTAGCCTGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp CGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTGCCACGTTACTTGGCTTCTCTaGACCTCAATTTCTTATCCT +
Preference number: 4 (lower is better)
Translates to: RNVLQRRPRGSWVDRSCHVTWLL*TSISYP
Trigger: AGGATAAGAAATTGAGGTTCAGAGAAGCCAAGTAAC...GTGGCAGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp GGGGTCCTAGCCAACTATTCCGTAGTGGCACTGAGGCCCCCAGCCAACAGCCAGGGGGAATGGCTGGAATaGAAGGTTACAGTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: GVLANYSVVALRPPANSQGEWLE*KVTVSE
Trigger: TTCTGAAACTGTAACCTTTCATTCCAGCCATTCCCC...CTGGCTGTTGGCTGGGGGCCTCAGTGCCACTACGGAATAGTTGGCTAGGACCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp CATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGGTCATCATTTCTCTGTaGCGTTGGCTTTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: HQCLLSARCALSRCLVGEVIISL*RWLSSG
Trigger: CCCTGAGGAAAGCCAACGTCACAGAGAAATGATGAC...CTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp AGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGATCCGAAGCCAGGTTTaGGAAAGTGGTCATCATTTC +
Preference number: 4 (lower is better)
Translates to: RLGVAHQCLLSARCALSRIRSQV*ESGHHF
Trigger: GAAATGATGACCACTTTCTCAAACCTGGCTTCGGAT...CCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp CGAGGAACTGGAGAAAGGCATGGGAATCTGGTCGGTTTTCTCCAGGCGCATCTGTGGCTGCAGCTGTGTTaGTCAGCAACTGCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: RGTGERHGNLVGFLQAHLWLQLC*SATALC
Trigger: GCACAGAGCAGTTGCTGATCAACACAGCTGCAGCCA...CAGATGCGCCTGGAGAAAACCGACCAGATTCCCATGCCTTTCTCCAGTTCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571186.5
CDS-3UTR GCA 90 bp CAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGTTTCTGCCCAACTTCTaGTGGCATCTCCATACTCTC +
Preference number: 4 (lower is better)
Translates to: QCLLSARCALSRCLVGEQFLPNF*WHLHTL
Trigger: GAGAGTATGGAGATGCCAGCAGAAGTTGGGCAGAAA...CTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp ATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGCCAGTGCTTCAGGTCTaGCGGAAGCTCCTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: IQPGEELCPQVPSSRSSVPVLQV*RKLLWE
Trigger: TTCCCAGAGGAGCTTCCGGCAGACCTGAAGCACTGG...CACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp ATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGTCAGCTGGCTTCCAGTaGTTCAGGTCTGCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: IQPGEELCPQVPSSRSSVSAGFQ*FRSAGS
Trigger: GCTTCCGGCAGACCTGAAGCACTGGAAGCCAGCTGA...CACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp CCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCTCAGAGAACATGCCCCAGCCTCAGAGATTTaGCAGAGCCCATGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: PQVPSSRSSVVSVLREHAPASEI*QSPWGR
Trigger: TCTGCCCCATGGGCTCTGGCAAATCTCTGAGGCTGG...GGCATGTTCTCTGAGGACACTAACCACGCTGGACCTTGAACTGGGTACTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp TACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCTCAGAGAACATGCCTGTCCAGGTGCTCTGTCATGTTTaGTCGGGAGGTCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: YPVQGPAWLVSSENMPVQVLCHV*SGGQGR
Trigger: CCTGCCCTGACCTCCCGAGCAAACATGACAGAGCAC...CTGGACAGGCATGTTCTCTGAGGACACTAACCACGCTGGACCTTGAACTGGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp GCTTTGGCTTTGGCCAACAATGTCAGTGCATTGAGTCCCATAGACAAAAGCAGCCCCGCTCCAGGCTCTTaGTGCTGCTCCTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: ALALANNVSALSPIDKSSPAPGS*CCSSPA
Trigger: GGCTGGAGAGGAGCAGCAGCAAGAGCCTGGAGCGGG...GCTGCTTTTGTCTATGGGACTCAATGCACTGACATTGTTGGCCAAAGCCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp GATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCTGCAGGAAGCCATCTTaGGCTTCCAGCTCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: DAEAHGIQPGEELCPQVPCRKPS*ASSSSK
Trigger: CTTCGAGGAGCTGGAAGCGCAAGATGGCTTCCTGCA...GGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp CTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGGTCCTCACGTCTaGGGATGGGAACTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LMGYSLEKSCVHKYPVQGPGPHV*GWELVL
Trigger: GAGGACCAGTTCCCATCCGCAGACGTGAGGACCTGG...ACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp TCCCAGCTCCACCAACACCTCAGACTTCATCTCCTAAGCCTCGGTTTCCTTCTCCCGCCTCCAAGGCCTTaGCCAGTACATGTGCATCAG +
Preference number: 4 (lower is better)
Translates to: SQLHQHLRLHLLSLGFLLPPPRP*PVHVHQ
Trigger: CTGATGCACATGTACTGGGCAAGGCCTTGGAGGCGG...GAGAAGGAAACCGAGGCTTAGGAGATGAAGTCTGAGGTGTTGGTGGAGCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp CTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTGCATCCAGGTCCAGATaGTGCAGGGAGGAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: LRLMGYSLEKSCVHKYPVASRSR*CREEKA
Trigger: GGCCTTTTCCTCCCTGCAGCATCTGGACCTGGATGC...AACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp CTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCAGGCAGAATGGGGCTaGCTCTGTCACTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LMGYSLEKSCVHKYPVQGQAEWG*LCHSLW
Trigger: CCAGAGGGAGTGACAGAGGCAGCCCCATTCTGCCTG...ACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp ATTAGCTGTTTCCCTGCTAAGGGCTGGTGCATCTGGCCAGGCCTAGCTTTGGCTTCAGTGTCTTCTGAGTaGCCGGTGTGCCCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: ISCFPAKGWCIWPGLALASVSSE*PVCPVK
Trigger: CTTGACAGGGCACACCGGGCACTCAGAAGACACTGA...AGCCAAAGCTAGGCCTGGCCAGATGCACCAGCCCTTAGCAGGGAAACAGCTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp AGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGGGCCAACAATGTCAGTaGATTGAGTCCCATAGACAA +
Preference number: 4 (lower is better)
Translates to: RLGVAHQCLLSARCALSRGQQCQ*IESHRQ
Trigger: TTGTCTATGGGACTCAATGCACTGACATTGTTGGCC...CCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp AACCAGAGCAGTGGGTACCCCAAAATGGTAACAGGGTATGAACTCAAACCCTGGCCCTTTCGGACTCCCTaGAGCCAAGGTGGGACTCCG +
Preference number: 4 (lower is better)
Translates to: NQSSGYPKMVTGYELKPWPFRTP*SQGGTP
Trigger: CGGAGTCCCACCTTGGCTGCAGGGAGTCCGAAAGGG...CCAGGGTTTGAGTTCATACCCTGTTACCATTTTGGGGTACCCACTGCTCTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp GGGTGCCAGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCAAGGTGCTTGCCTGTCTaGAAAGATCATCAACCACGC +
Preference number: 4 (lower is better)
Translates to: GCQDAEAHGIQPGEELCPRCLPV*KDHQPR
Trigger: GCGTGGTTGATGATCTTTGCAGACAGGCAAGCACCT...TGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCTGGCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp CTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCAGCTGCTTTGAATTTCCCTTaGACTGTGATAAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: LSAMSFREGLGAPGWTAAALNFP*TVIRAL
Trigger: CAAAGCCCTTATCACAGTGCAAGGGAAATTCAAAGC...AGCTGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp CTTTCAGAGCCTCACCCACCAGTGCGCGTAAAACGCCAGGGCCATCTTCTTACTTATACACAGGCGCCTTaGTGGGTACAGAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: LSEPHPPVRVKRQGHLLTYTQAP*WVQRAQ
Trigger: CTGTGCCCTCTGTACCCAGCAAGGCGCCTGTGTATA...AGTAAGAAGATGGCCCTGGCGTTTTACGCGCACTGGTGGGTGAGGCTCTGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp CTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTGGCCTTGGAGATCTCTaGAGTGAGCATCTGTGCGGC +
Preference number: 4 (lower is better)
Translates to: LRLMGYSLEKSCVHKYPVGLGDL*SEHLCG
Trigger: GCCGCACAGATGCTCACTGCAGAGATCTCCAAGGCC...AACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp GTCAGGCACTCCATGGACACAAACAGCCCAATGTGGTGGGCACTGTCCCCTTTTTGCCAAGGCTGCCATTaGAAGACACAGGAGCGAAGG +
Preference number: 4 (lower is better)
Translates to: VRHSMDTNSPMWWALSPFCQGCH*KTQERR
Trigger: CCTTCGCTCCTGTGTCTTGCAATGGCAGCCTTGGCA...AAAAGGGGACAGTGCCCACCACATTGGGCTGTTTGTGTCCATGGAGTGCCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp TGGAGCCGGGCCTGTGTCTGTCAGCAGAGCAAGATGTGGTTCATTCCGCAGCCGCTGAGGCATGAGAATTaGTTGAACCTGGAACTGCAG +
Preference number: 4 (lower is better)
Translates to: WSRACVCQQSKMWFIPQPLRHEN*LNLELQ
Trigger: CTGCAGTTCCAGGTTCAAGCAATTCTCATGCCTCAG...CGGCTGCGGAATGAACCACATCTTGCTCTGCTGACAGACACAGGCCCGGCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp GCTTTGGCTTTGGCCAACAATGTCAGTGCATTGAGTCCCATAGACAAAAGCAGCTTCTCCAGGCGCATCTaGCCGGAGGCTGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ALALANNVSALSPIDKSSFSRRI*PEAGSW
Trigger: CCAGGAGCCAGCCTCCGGCCAGATGCGCCTGGAGAA...GCTGCTTTTGTCTATGGGACTCAATGCACTGACATTGTTGGCCAAAGCCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp TACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGGATGTTGGGAGGCCGTaGACAGTGAATCCACTGGGA +
Preference number: 4 (lower is better)
Translates to: YSLEKSCVHKYPVQGPAWDVGRP*TVNPLG
Trigger: TCCCAGTGGATTCACTGTCCACGGCCTCCCAACATC...CCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GCTTTGGCCAACAATGTCAGTGCATTGAGTCCCATAGACAAAAGCAGCTGCCACTGCTGGGCAGGTCAGTaGCTGATGGAGCGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: ALANNVSALSPIDKSSCHCWAGQ*LMERRG
Trigger: GCCCCTTCGCTCCATCAGCCACTGACCTGCCCAGCA...GTGGCAGCTGCTTTTGTCTATGGGACTCAATGCACTGACATTGTTGGCCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CCCAGCCTGTTGCAATCTGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCATTTTGGAAGCTTGTTaGAGACCTCTCCAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: PSLLQSGELAGWGLPISVILEAC*RPLQLP
Trigger: CGGCAGCTGGAGAGGTCTCCAACAAGCTTCCAAAAT...GACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCAGATTGCAACAGGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GGCAGGAATATTGCAGAAGTGAGTGTGTGTCTTCAGTGCATCTTATCGAGAGGCGCCGCCGGTGCTCCTTaGCAGCCAACAGCACCTCAG +
Preference number: 4 (lower is better)
Translates to: GRNIAEVSVCLQCILSRGAAGAP*QPTAPQ
Trigger: CTGAGGTGCTGTTGGCTGCCAAGGAGCACCGGCGGC...GCCTCTCGATAAGATGCACTGAAGACACACACTCACTTCTGCAATATTCCTGCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp GCTTTGGCTTTGGCCAACAATGTCAGTGCATTGAGTCCCATAGACAAAAGCAGCGCCGCCGGTGCTCCTTaGCAGCCAACAGCACCTCAG +
Preference number: 4 (lower is better)
Translates to: ALALANNVSALSPIDKSSAAGAP*QPTAPQ
Trigger: CTGAGGTGCTGTTGGCTGCCAAGGAGCACCGGCGGC...GCTGCTTTTGTCTATGGGACTCAATGCACTGACATTGTTGGCCAAAGCCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR CCA 90 bp ATATTAGATAACCAGAGCAGTGGGTACCCCAAAATGGTAACAGGGTATGAACTCGCCTTGCTCAGGCTCTaGACCAGGCGGCCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: ILDNQSSGYPKMVTGYELALLRL*TRRPRG
Trigger: GCCCCGGGGCCGCCTGGTCCAGAGCCTGAGCAAGGC...GAGTTCATACCCTGTTACCATTTTGGGGTACCCACTGCTCTGGTTATCTAATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR CCA 90 bp AGTGGGTACCCCAAAATGGTAACAGGGTATGAACTCAAACCCTGGACCTGCCTGAGGGCCTCTGAGAGCTaGCACACTGCCCGGCACAAA +
Preference number: 4 (lower is better)
Translates to: SGYPKMVTGYELKPWTCLRASES*HTARHK
Trigger: TTTGTGCCGGGCAGTGTGCCAGCTCTCAGAGGCCCT...CAGGCAGGTCCAGGGTTTGAGTTCATACCCTGTTACCATTTTGGGGTACCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR CCA 90 bp GGCAGGAATATTGCAGAAGTGAGTGTGTGTCTTCAGTGCATCTTATCGAGAGGCGCGTGGAGGGCAGCTTaGCGTCCTCCCCAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GRNIAEVSVCLQCILSRGAWRAA*RPPQAP
Trigger: TGGAGCTTGGGGAGGACGCCAAGCTGCCCTCCACGC...GCCTCTCGATAAGATGCACTGAAGACACACACTCACTTCTGCAATATTCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp TGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTCTTCTGAGTGCCCGGTGTGTTCAAGGTCCAGCGTaGTTAGTGTCCTCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: WGISRLGVAHQCLLSARCVQGPA*LVSSEN
Trigger: GTTCTCTGAGGACACTAACCACGCTGGACCTTGAAC...ACACCGGGCACTCAGAAGACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GACGTGGTCAGTGTCAATGGCGTGTCAGACCCTGAAGGGGCTCTAGCCCAGGAATCATGGGATACAGCCTaGAGAAGAGCTGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: DVVSVNGVSDPEGALAQESWDTA*RRAVST
Trigger: TGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGA...TTCCTGGGCTAGAGCCCCTTCAGGGTCTGACACGCCATTGACACTGACCACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp GAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCCAGCAGAGCAAGATGTaGTTCATTCCGCAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: EKSCVHKYPVQGPAWLVSQQSKM*FIPQPG
Trigger: GCCCGGCTGCGGAATGAACCACATCTTGCTCTGCTG...GGACACTAACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp CTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTGGGGAATTAGCAGGCTaGGGGTTGCCCATCAGTGTC +
Preference number: 4 (lower is better)
Translates to: LRLMGYSLEKSCVHKYPVGELAG*GLPISV
Trigger: GACACTGATGGGCAACCCCCAGCCTGCTAATTCCCC...AACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GCCCAGCCTGTTGCAATCTGGGGAATTAGCAGGCTGGGGGTTGCCCATCAGTGTGTCAGACCAAAAACCTaGCACATGGCACAGTGGATG +
Preference number: 4 (lower is better)
Translates to: AQPVAIWGISRLGVAHQCVRPKT*HMAQWM
Trigger: CATCCACTGTGCCATGTGCCAGGTTTTTGGTCTGAC...ACACTGATGGGCAACCCCCAGCCTGCTAATTCCCCAGATTGCAACAGGCTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp GTACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCTCAGAGAACATGCCTGTCCACTGGCCAACCTCACCTaGCAGCCCTGTCCAAAGAGT +
Preference number: 4 (lower is better)
Translates to: VPSSRSSVVSVLREHACPLANLT*QPCPKS
Trigger: ACTCTTTGGACAGGGCTGCCAGGTGAGGTTGGCCAG...TGGACAGGCATGTTCTCTGAGGACACTAACCACGCTGGACCTTGAACTGGGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp ACCAGGCATCCACCCAACTGGGCGCTAAAGGAGCCTGGAGCCGGGCCTGTGTCTCTTTGCCCTTTTAACTaGCACAAGGCTCAGTTATAC +
Preference number: 4 (lower is better)
Translates to: TRHPPNWALKEPGAGPVSLCPFN*HKAQLY
Trigger: GTATAACTGAGCCTTGTGCCAGTTAAAAGGGCAAAG...AGACACAGGCCCGGCTCCAGGCTCCTTTAGCGCCCAGTTGGGTGGATGCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp AATGCTTGTCATCTTCTCAGCCCTGGCTGCAGCTGTGTTGATCAGCAACTGCTCGGATGGGGAGGGCCCTaGAGTGGCATGGATGTCTCT +
Preference number: 4 (lower is better)
Translates to: NACHLLSPGCSCVDQQLLGWGGP*SGMDVS
Trigger: AGAGACATCCATGCCACTCCAGGGCCCTCCCCATCC...GAGCAGTTGCTGATCAACACAGCTGCAGCCAGGGCTGAGAAGATGACAAGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571186.5
CDS-3UTR TCA 90 bp CCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCTCAGAGAACATGCCTTCTCCTCTGCTGCCTaGAGTAGCTTGGTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: PQVPSSRSSVVSVLREHAFSSAA*SSLVSP
Trigger: TGGGGAGACCAAGCTACTTCAGGCAGCAGAGGAGAA...GGCATGTTCTCTGAGGACACTAACCACGCTGGACCTTGAACTGGGTACTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618327.4
CDS-3UTR TCA 90 bp GATGACCTTGGCTTTTGGGGGATTCTCGCTTGTCATGCTTTGCAGTTGGACATAGGGCCCCGGCAGCCGTaGACTTGTTGTACTGGACGT +
Preference number: 4 (lower is better)
Translates to: DDLGFWGILACHALQLDIGPRQP*TCCTGR
Trigger: ACGTCCAGTACAACAAGTTCACGGCTGCCGGGGCCC...TATGTCCAACTGCAAAGCATGACAAGCGAGAATCCCCCAAAAGCCAAGGTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644232.1
CDS-3UTR TCA 90 bp CAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTCTGAGGTCAAGAGTTTaGGACCAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: QPGEELCPQVPSSRSSVVLRSRV*DQPGQH
Trigger: ATGTTGGCCAGGCTGGTCTCAAACTCTTGACCTCAG...AACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp GAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCGGTGGGTGGATCACCTaGGGTCAAGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: EKSCVHKYPVQGPAWLVSGGWIT*GQEFET
Trigger: GGTCTCAAACTCTTGACCTCAGGTGATCCACCCACC...GGACACTAACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp AACCAGAGCAGTGGGTACCCCAAAATGGTAACAGGGTATGAACTCAAACCCTGGCCCATCAGTGTCTTCTaGGTGCCCGGTGTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: NQSSGYPKMVTGYELKPWPISVF*VPGVPC
Trigger: ACAGGGCACACCGGGCACTCAGAAGACACTGATGGG...CCAGGGTTTGAGTTCATACCCTGTTACCATTTTGGGGTACCCACTGCTCTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp CATCAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGAATGGTAACAGGGTATaGACTCAAACCCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: HQCLLSARCALSRCLVGENGNRV*TQTLDL
Trigger: CAGGTCCAGGGTTTGAGTTCATACCCTGTTACCATT...CTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR TCA 90 bp TACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCTCAGAGAACATGCCTGTCCAGTCAAGCTGCCCCACCTaGCACAGAGTAGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: YPVQGPAWLVSSENMPVQSSCPT*HRVGQK
Trigger: CTTCTGTCCTACTCTGTGTCAGGTGGGGCAGCTTGA...CTGGACAGGCATGTTCTCTGAGGACACTAACCACGCTGGACCTTGAACTGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp AGGGCAGCTACAGCCAGACTAGCGCCTGGCTGGGACTGTCGGGGATGCGGTTTGTCTAAGGCTAGGTTATaGAAAGTGGTCTCTCTCTAT +
Preference number: 4 (lower is better)
Translates to: RAATARLAPGWDCRGCGLSKARL*KVVSLY
Trigger: ATAGAGAGAGACCACTTTTCATAACCTAGCCTTAGA...CAAACCGCATCCCCGACAGTCCCAGCCAGGCGCTAGTCTGGCTGTAGCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp ATTCCACGTGTAGCCCATTCAGACTGGAGATCTGCACACAAGAGGGCAGCTACAGCCTGCGAGGAAGAGTaGCCATTTGGAAGGTGCGTG +
Preference number: 4 (lower is better)
Translates to: IPRVAHSDWRSAHKRAATACEEE*PFGRCV
Trigger: CACGCACCTTCCAAATGGTCACTCTTCCTCGCAGGC...TGTAGCTGCCCTCTTGTGTGCAGATCTCCAGTCTGAATGGGCTACACGTGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp GCCGTGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACAATAGCCAAAGTGTGTaGCAAATGAGAATTGAACTG +
Preference number: 4 (lower is better)
Translates to: AVAVRNVLQRRPRGSWVDNSQSV*QMRIEL
Trigger: CAGTTCAATTCTCATTTGTCACACACTTTGGCTATT...GTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp GCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGGGATTGCCTTCTGTGTATaGCAAATTCTACTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: ARCGSFRSRAGANPEPAGIAFCV*QILLLW
Trigger: CCAAAGCAGTAGAATTTGTCATACACAGAAGGCAAT...CCCTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR TCA 90 bp GATGGGTCCCTCAGGGAGATTCAGGCAGCTCAACGAGGAACTGGAGAAAGGCATCCAGTCCTCTCCTTGTaGCTTGGCTCTGAGAGCTAT +
Preference number: 4 (lower is better)
Translates to: DGSLREIQAAQRGTGERHPVLSL*LGSESY
Trigger: ATAGCTCTCAGAGCCAAGTCACAAGGAGAGGACTGG...ATGCCTTTCTCCAGTTCCTCGTTGAGCTGCCTGAATCTCCCTGAGGGACCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571186.5
CDS-3UTR TCA 90 bp CCGCCTCCTTTTAAAGGAGAAACGGAGTCCCAAAGAGGCATGCAGCAAGGTGCAAAAGGGGACAGCTGGTaGAAAGGAAGGAGACCCCGA +
Preference number: 4 (lower is better)
Translates to: PPPFKGETESQRGMQQGAKGDSW*KGRRPR
Trigger: TCGGGGTCTCCTTCCTTTTCACCAGCTGTCCCCTTT...TGCACCTTGCTGCATGCCTCTTTGGGACTCCGTTTCTCCTTTAAAAGGAGGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000644232.1
CDS-3UTR TCA 90 bp CCCCGCCTCCTTTTAAAGGAGAAACGGAGTCCCAAAGAGGCATGCAGCAAGGTGAGAGCGAATTCGATTTaGGATCTGAGGGCAGACCCG +
Preference number: 4 (lower is better)
Translates to: PRLLLKEKRSPKEACSKVRANSI*DLRADP
Trigger: CGGGTCTGCCCTCAGATCTCAAATCGAATTCGCTCT...CACCTTGCTGCATGCCTCTTTGGGACTCCGTTTCTCCTTTAAAAGGAGGCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644232.1
CDS-3UTR TCA 90 bp AACCAGGAAAGCAACTCAGACGCTAGGGCCCCGAGGGGCGGAGCGAAGCGGTACTTATGGTTGAAGATCTaGACTACCTCGGAATCTCTT +
Preference number: 4 (lower is better)
Translates to: NQESNSDARAPRGGAKRYLWLKI*TTSESL
Trigger: AAGAGATTCCGAGGTAGTTCAGATCTTCAACCATAA...GTACCGCTTCGCTCCGCCCCTCGGGGCCCTAGCGTCTGAGTTGCTTTCCTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644232.1
CDS-3UTR GCA 90 bp CTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTTCAGCTGGCTTCCAGTaGTTCAGGTCTGCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: LMGYSLEKSCVHKYPVQGSAGFQ*FRSAGS
Trigger: GCTTCCGGCAGACCTGAAGCACTGGAAGCCAGCTGA...ACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp AGTGGGTACCCCAAAATGGTAACAGGGTATGAACTCAAACCCTGGACCTGCCTGCCAGCCTCAGAGATTTaGCAGAGCCCATGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SGYPKMVTGYELKPWTCLPASEI*QSPWGR
Trigger: TCTGCCCCATGGGCTCTGGCAAATCTCTGAGGCTGG...CAGGCAGGTCCAGGGTTTGAGTTCATACCCTGTTACCATTTTGGGGTACCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp AACCAGAGCAGTGGGTACCCCAAAATGGTAACAGGGTATGAACTCAAACCCTGGAGCTTGGTCTCCCCATaGTGCTGCAGGGACTCCCAC +
Preference number: 4 (lower is better)
Translates to: NQSSGYPKMVTGYELKPWSLVSP*CCRDSH
Trigger: GTGGGAGTCCCTGCAGCAGCATGGGGAGACCAAGCT...CCAGGGTTTGAGTTCATACCCTGTTACCATTTTGGGGTACCCACTGCTCTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324288.14
ENST00000618327.4
CDS-3UTR GCA 90 bp CCCAGGTCAGTGATGTTGTTCTGGGACAGATTGAGGGTTTCCAAGGACTTCAGCGCATCCAGGTCCAGATaGTGCAGGGAGGAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: PRSVMLFWDRLRVSKDFSASRSR*CREEKA
Trigger: GGCCTTTTCCTCCCTGCAGCATCTGGACCTGGATGC...GCTGAAGTCCTTGGAAACCCTCAATCTGTCCCAGAACAACATCACTGACCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618207.4
CDS-3UTR GCA 90 bp AGCAGAGCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCACTCCCACGTCGCAGATaGAGTTATTGTACAAGCTTA +
Preference number: 4 (lower is better)
Translates to: SRARCGSFRSRAGANPEPLPRRR*SYCTSL
Trigger: TAAGCTTGTACAATAACTGCATCTGCGACGTGGGAG...TGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGCTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp ATTAGCTGTTTCCCTGCTAAGGGCTGGTGCATCTGGCCAGGCCTAGCTTTGGCTTGTCCTCAGAGAACATaGCTGTCCAGAGCACAGCTG +
Preference number: 4 (lower is better)
Translates to: ISCFPAKGWCIWPGLALACPQRT*LSRAQL
Trigger: CAGCTGTGCTCTGGACAGGCATGTTCTCTGAGGACA...AGCCAAAGCTAGGCCTGGCCAGATGCACCAGCCCTTAGCAGGGAAACAGCTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp GGCAGGAATATTGCAGAAGTGAGTGTGTGTCTTCAGTGCATCTTATCGAGAGGCTGGGTGGACCGCAGCTaGCACCAGGCATCCACCCAA +
Preference number: 4 (lower is better)
Translates to: GRNIAEVSVCLQCILSRGWVDRS*HQASTQ
Trigger: TTGGGTGGATGCCTGGTGGCAGCTGCGGTCCACCCA...GCCTCTCGATAAGATGCACTGAAGACACACACTCACTTCTGCAATATTCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp CAGTGTCTTCTGAGTGCCCGGTGTGCCCTGTCAAGGTGTCTGGTCGGAGAGCAGGGCCAACAATGTCAGTaGATTGAGTCCCATAGACAA +
Preference number: 4 (lower is better)
Translates to: QCLLSARCALSRCLVGEQGQQCQ*IESHRQ
Trigger: TTGTCTATGGGACTCAATGCACTGACATTGTTGGCC...CTGCTCTCCGACCAGACACCTTGACAGGGCACACCGGGCACTCAGAAGACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR GCA 90 bp TCCCAGCTCCACCAACACCTCAGACTTCATCTCCTAAGCCTCGGTTTCCTTCTCAGTGCAGGGATCCCTTaGAGGGTGACACCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: SQLHQHLRLHLLSLGFLLSAGIP*RVTPEL
Trigger: TAGCTCAGGTGTCACCCTGCAAGGGATCCCTGCACT...GAGAAGGAAACCGAGGCTTAGGAGATGAAGTCTGAGGTGTTGGTGGAGCTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp CCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCTCAGAGAACATGCCGGCCTCTGTAGAGTCTaGAAGTGCAGGGATCCCTTG +
Preference number: 4 (lower is better)
Translates to: PQVPSSRSSVVSVLREHAGLCRV*KCRDPL
Trigger: CAAGGGATCCCTGCACTTGCAGACTCTACAGAGGCC...GGCATGTTCTCTGAGGACACTAACCACGCTGGACCTTGAACTGGGTACTTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp CTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCACTGTGCCTGTCCCTaGAGAGAGGTCCTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: LRLMGYSLEKSCVHKYPVHCACP*REVLQR
Trigger: TCTTTGGAGGACCTCTCTGCAGGGACAGGCACAGTG...AACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp TACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGAGGGAGACATTTGTATaGAGAGAGAGGCCTGCGAGG +
Preference number: 4 (lower is better)
Translates to: YSLEKSCVHKYPVQGPAWRETFV*RERPAR
Trigger: CCTCGCAGGCCTCTCTCTGCATACAAATGTCTCCCT...CCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp GTGACCAGCTGGAGGCACGTGGTAGACCAGGCATCTTCACAAAGCCCGCTGCTGTCAGGAAATGGTACCTaGTCTCATTCAGACCGTTTC +
Preference number: 4 (lower is better)
Translates to: VTSWRHVVDQASSQSPLLSGNGT*SHSDRF
Trigger: GAAACGGTCTGAATGAGAGCAGGTACCATTTCCTGA...CAGCAGCGGGCTTTGTGAAGATGCCTGGTCTACCACGTGCCTCCAGCTGGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp AGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTTAACTGCAGCCTTGAACTaGTGGGCTCACGCAATCCTC +
Preference number: 4 (lower is better)
Translates to: SLEKSCVHKYPVQGPAWLTAALN*WAHAIL
Trigger: GAGGATTGCGTGAGCCCAGCAGTTCAAGGCTGCAGT...TAACCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp CGCAGCAGCGGATCAGATCAGCTCTCAGGGCCCCGACACCCCCTGAGCACCTACAGCTTTTCCTGTATCTaGCTGTTACCTGAACTATTA +
Preference number: 4 (lower is better)
Translates to: RSSGSDQLSGPRHPLSTYSFSCI*LLPELL
Trigger: TAATAGTTCAGGTAACAGGCAGATACAGGAAAAGCT...GTAGGTGCTCAGGGGGTGTCGGGGCCCTGAGAGCTGATCTGATCCGCTGCTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp AGGATGCTGAGGCTCATGGGATACAGCCTGGAGAAGAGCTGTGTCCACAAGTACTGGCCTTGCACGGCTTaGTTAACCTCTCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: RMLRLMGYSLEKSCVHKYWPCTA*LTSLSS
Trigger: GGAGCTCAGAGAGGTTAAGCAAGCCGTGCAAGGCCA...GTACTTGTGGACACAGCTCTTCTCCAGGCTGTATCCCATGAGCCTCAGCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp TACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCTCAGAGAACATGCCTGTCCAGAGGGACATGGACCTGTaGAGAGACAGGCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: YPVQGPAWLVSSENMPVQRDMDL*RDRQLL
Trigger: GAGAAGCTGCCTGTCTCTGCACAGGTCCATGTCCCT...CTGGACAGGCATGTTCTCTGAGGACACTAACCACGCTGGACCTTGAACTGGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp GGCAGGAATATTGCAGAAGTGAGTGTGTGTCTTCAGTGCATCTTATCGAGAGGCCCCAGATGGTGCTGGTaGCCTCACAGCTGCCATCCC +
Preference number: 4 (lower is better)
Translates to: GRNIAEVSVCLQCILSRGPRWCW*PHSCHP
Trigger: GGGATGGCAGCTGTGAGGGCACCAGCACCATCTGGG...GCCTCTCGATAAGATGCACTGAAGACACACACTCACTTCTGCAATATTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp TGGCTGTCCGCAATGTCCTTCAGAGAAGGCCTCGGGGCTCCTGGGTGGACCGCATGTATAGTTGGTGCTTaGTTAATGAATGACGTGGTC +
Preference number: 4 (lower is better)
Translates to: WLSAMSFREGLGAPGWTACIVGA*LMNDVV
Trigger: GACCACGTCATTCATTAAGCAAGCACCAACTATACA...TGCGGTCCACCCAGGAGCCCCGAGGCCTTCTCTGAAGGACATTGCGGACAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp GAGCAAGATGTGGTTCATTCCGCAGCCGGGCAGGGGCCAACCCTGAACCAGCAGTCTTGGCAGGAATATTaGAGAAGTGAGTGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: EQDVVHSAAGQGPTLNQQSWQEY*RSECVS
Trigger: AGACACACACTCACTTCTGCAATATTCCTGCCAAGA...CTGCTGGTTCAGGGTTGGCCCCTGCCCGGCTGCGGAATGAACCACATCTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR GCA 90 bp GAAATGCTTGTCATCTTCTCAGCCCTGGCTGCAGCTGTGTTGATCAGCAACTGCGTGTTAGAGACTGGGTaGTTGGAGGGGCCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: EMLVIFSALAAAVLISNCVLETG*LEGPSW
Trigger: CCAGGAAGGCCCCTCCAAGCACCCAGTCTCTAACAC...GCAGTTGCTGATCAACACAGCTGCAGCCAGGGCTGAGAAGATGACAAGCATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571186.5
CDS-3UTR GCA 90 bp GAGGAAATGCTTGTCATCTTCTCAGCCCTGGCTGCAGCTGTGTTGATCAGCAACAGAGCTGGCTTCCAGTaGTTCAGGTCTGCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: EEMLVIFSALAAAVLISNRAGFQ*FRSAGS
Trigger: GCTTCCGGCAGACCTGAAGCACTGGAAGCCAGCTCT...GTTGCTGATCAACACAGCTGCAGCCAGGGCTGAGAAGATGACAAGCATTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571186.5
CDS-3UTR CCA 90 bp GGTCCCTCAGGGAGATTCAGGCAGCTCAACGAGGAACTGGAGAAAGGCATGGGAAACAGCCTGCTGAACTaGTCGCAGTTGATGGTGTCT +
Preference number: 4 (lower is better)
Translates to: GPSGRFRQLNEELEKGMGNSLLN*SQLMVS
Trigger: AGACACCATCAACTGCGACCAGTTCAGCAGGCTGTT...TCCCATGCCTTTCTCCAGTTCCTCGTTGAGCTGCCTGAATCTCCCTGAGGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571186.5
CDS-3UTR CCA 90 bp GATGGGTCCCTCAGGGAGATTCAGGCAGCTCAACGAGGAACTGGAGAAAGGCATCCAGTTCCGCGATATTaGCATAAGCCTCCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: DGSLREIQAAQRGTGERHPVPRY*HKPPWS
Trigger: AGACCAGGGAGGCTTATGCCAATATCGCGGAACTGG...ATGCCTTTCTCCAGTTCCTCGTTGAGCTGCCTGAATCTCCCTGAGGGACCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571186.5
CDS-3UTR CCA 90 bp ATTAGCTGTTTCCCTGCTAAGGGCTGGTGCATCTGGCCAGGCCTAGCTTTGGCTTGCCGGAAGCTCCTCTaGGAAGGGTCTTTTCTGACT +
Preference number: 4 (lower is better)
Translates to: ISCFPAKGWCIWPGLALACRKLL*EGSFLT
Trigger: AGTCAGAAAAGACCCTTCCCAGAGGAGCTTCCGGCA...AGCCAAAGCTAGGCCTGGCCAGATGCACCAGCCCTTAGCAGGGAAACAGCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GCTTTGGCTTTGGCCAACAATGTCAGTGCATTGAGTCCCATAGACAAAAGCAGCCCGGAGGCTGGCTCCTaGTTGAACAGCGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: ALALANNVSALSPIDKSSPEAGS*LNSAGS
Trigger: ACTGCCTGCGCTGTTCAACCAGGAGCCAGCCTCCGG...GCTGCTTTTGTCTATGGGACTCAATGCACTGACATTGTTGGCCAAAGCCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GCTTTGGCTTTGGCCAACAATGTCAGTGCATTGAGTCCCATAGACAAAAGCAGCCATCTGGCCGGAGGCTaGCTCCTGGTTGAACAGCGC +
Preference number: 4 (lower is better)
Translates to: ALALANNVSALSPIDKSSHLAGG*LLVEQR
Trigger: GCGCTGTTCAACCAGGAGCCAGCCTCCGGCCAGATG...GCTGCTTTTGTCTATGGGACTCAATGCACTGACATTGTTGGCCAAAGCCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp TTTGGCAGCCAACGTGCAAATCCGAAGCCAGGTTTGAGAAAGTGGTCATCATTTTTCTCCAGGCGCATCTaGCCGGAGGCTGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: FGSQRANPKPGLRKWSSFFSRRI*PEAGSW
Trigger: CCAGGAGCCAGCCTCCGGCCAGATGCGCCTGGAGAA...AAATGATGACCACTTTCTCAAACCTGGCTTCGGATTTGCACGTTGGCTGCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324288.14
CDS-3UTR CCA 90 bp TGGAGCCGGGCCTGTGTCTGTCAGCAGAGCAAGATGTGGTTCATTCCGCAGCCGAACTGGAGAAAGGCATaGGAATCTGGTCGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: WSRACVCQQSKMWFIPQPNWRKA*ESGRFS
Trigger: AGAAAACCGACCAGATTCCCATGCCTTTCTCCAGTT...CGGCTGCGGAATGAACCACATCTTGCTCTGCTGACAGACACAGGCCCGGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp TACAGCCTGGAGAAGAGCTGTGTCCACAAGTACCCAGTTCAAGGTCCAGCGTGGTGGGGACAAACTGGATaGGTCCCTCAGGGAGATTCA +
Preference number: 4 (lower is better)
Translates to: YSLEKSCVHKYPVQGPAWWGQTG*VPQGDS
Trigger: TGAATCTCCCTGAGGGACCCATCCAGTTTGTCCCCA...CCACGCTGGACCTTGAACTGGGTACTTGTGGACACAGCTCTTCTCCAGGCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GCTTTGGCTTTGGCCAACAATGTCAGTGCATTGAGTCCCATAGACAAAAGCAGCGAGGGGGTACTTGGCTaGCCTGGGGCACCTCACCAT +
Preference number: 4 (lower is better)
Translates to: ALALANNVSALSPIDKSSEGVLG*PGAPHH
Trigger: ATGGTGAGGTGCCCCAGGCCAGCCAAGTACCCCCTC...GCTGCTTTTGTCTATGGGACTCAATGCACTGACATTGTTGGCCAAAGCCAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324288.14
ENST00000618207.4
ENST00000618327.4
CDS-3UTR CCA 90 bp GTACCCAGTTCAAGGTCCAGCGTGGTTAGTGTCCTCAGAGAACATGCCTGTCCAGATGTTGGGAGGCCGTaGACAGTGAATCCACTGGGA +
Preference number: 4 (lower is better)
Translates to: VPSSRSSVVSVLREHACPDVGRP*TVNPLG
Trigger: TCCCAGTGGATTCACTGTCCACGGCCTCCCAACATC...TGGACAGGCATGTTCTCTGAGGACACTAACCACGCTGGACCTTGAACTGGGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324288.14
ENST00000381835.9
ENST00000618207.4
ENST00000618327.4