Pregenerated sensors for CIDEC (Homo sapiens)
Ensembl gene IDs: ENSG00000187288Ensembl transcript IDs: ENST00000336832.7, ENST00000423850.5, ENST00000430427.6, ENST00000443115.1, ENST00000455015.6, ENST00000487454.1, ENST00000618572.4, ENST00000675828.1, ENST00000679265.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GAGACCTCACAGGCAGGCAGCCCAGTCAAAGCCTCCTCTCTCCCATaGGTCCTTGAGCAATCCGAGCCCCTTCCTGAGGCTTCACAGTGG | + |
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Preference number: 5 (lower is better) Translates to: ETSQAGSPVKASSLP*VLEQSEPLPEASQW Trigger: CCACTGTGAAGCCTCAGGAAGGGGCTCGGATTGCTCAAGGACCCATGGGAGAGAGGAGGCTTTGACTGGGCTGCCTGCCTGTGAGGTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000336832.7 ENST00000455015.6 |
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| CDS CCA 90 bp | GATTTTACAGTCAGGCAGTCCCAATTTAGAATCTTGGCTCCCTCATaGATTTGCTGGGTGATTGAGAGCACCCACTATGTGCCTCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: DFTVRQSQFRILAPS*ICWVIESTHYVPQF Trigger: GAACTGAGGCACATAGTGGGTGCTCTCAATCACCCAGCAAATCCATGAGGGAGCCAAGATTCTAAATTGGGACTGCCTGACTGTAAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487454.1 |
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| CDS TCA 90 bp | TCCAGACCTCCTGAATCAGAATCTGCACTTGAACAAGGTCCCCTGTaGCCTGTATACCCATTAAAGTTTGAGAAGTTCTGGCTTACAGCT | + |
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Preference number: 5 (lower is better) Translates to: SRPPESESALEQGPL*PVYPLKFEKFWLTA Trigger: AGCTGTAAGCCAGAACTTCTCAAACTTTAATGGGTATACAGGTCACAGGGGACCTTGTTCAAGTGCAGATTCTGATTCAGGAGGTCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487454.1 |
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| CDS CCA 90 bp | TCAGGAGTAAAAGCACCAAGCATAGTGTCTACTCCTTTTTATGCATaGTGTGGTGGTGGTGTAAGCAGCAGCATTAATATCACCCAGGGA | + |
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Preference number: 5 (lower is better) Translates to: SGVKAPSIVSTPFYA*CGGGVSSSINITQG Trigger: TCCCTGGGTGATATTAATGCTGCTGCTTACACCACCACCACACCATGCATAAAAAGGAGTAGACACTATGCTTGGTGCTTTTACTCCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000487454.1 |
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| CDS TCA 72 bp | AGGTGCCAAGCAGTACGTGGCCTGTGGCCTGCATGCTaGAGAGGGCCCAGCGGAAAGCTTCCCTTGAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: RCQAVRGLWPAC*RGPSGKLPLRR Trigger: CCTCCTCAAGGGAAGCTTTCCGCTGGGCCCTCTTCAGCATGCAGGCCACAGGCCACGTACTGCTTGGCACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443115.1 |
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| CDS CCA 72 bp | CAGGCAGGCAGCCCAGTCAAAGCCTCCTCTCTCCCATaGGTCCTTGAGCAATCCGAGCCCCTTCCTGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: QAGSPVKASSLP*VLEQSEPLPEA Trigger: AGCCTCAGGAAGGGGCTCGGATTGCTCAAGGACCCATGGGAGAGAGGAGGCTTTGACTGGGCTGCCTGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000336832.7 ENST00000455015.6 |
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| CDS CAA 72 bp | GCAGCCCAGTCAAAGCCTCCTCTCTCCCATGGGTCCTaGAGCAATCCGAGCCCCTTCCTGAGGCTTCACAGT | + |
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Preference number: 6 (lower is better) Translates to: AAQSKPPLSHGS*SNPSPFLRLHS Trigger: ACTGTGAAGCCTCAGGAAGGGGCTCGGATTGCTCAAGGACCCATGGGAGAGAGGAGGCTTTGACTGGGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000336832.7 ENST00000455015.6 |
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| CDS CCA 72 bp | CTAAGGGACTTCATGGCGTATTCCATCCTTGTCAGCTaGACTGCGTTGGACCTCCCCCTCACAGCCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: LRDFMAYSILVS*TALDLPLTASW Trigger: CCAGGAGGCTGTGAGGGGGAGGTCCAACGCAGTCCAGCTGACAAGGATGGAATACGCCATGAAGTCCCTTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000423850.5 ENST00000487454.1 ENST00000618572.4 ENST00000675828.1 |
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| CDS CCA 72 bp | CTAAGGGACTTCATGGCGTATTCCATCCTTGTCAGCTaGACTGCGTTGGACTCAGCAGCTGCTGCTCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: LRDFMAYSILVS*TALDSAAAAPA Trigger: GGCAGGAGCAGCAGCTGCTGAGTCCAACGCAGTCCAGCTGACAAGGATGGAATACGCCATGAAGTCCCTTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000430427.6 ENST00000679265.1 |
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| CDS GCA 72 bp | CAGTCCCAATTTAGAATCTTGGCTCCCTCATGGATTTaGTGGGTGATTGAGAGCACCCACTATGTGCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: QSQFRILAPSWI*WVIESTHYVPQ Trigger: CTGAGGCACATAGTGGGTGCTCTCAATCACCCAGCAAATCCATGAGGGAGCCAAGATTCTAAATTGGGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487454.1 |
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| CDS CCA 72 bp | GTCAGGCAGTCCCAATTTAGAATCTTGGCTCCCTCATaGATTTGCTGGGTGATTGAGAGCACCCACTATGTG | + |
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Preference number: 6 (lower is better) Translates to: VRQSQFRILAPS*ICWVIESTHYV Trigger: CACATAGTGGGTGCTCTCAATCACCCAGCAAATCCATGAGGGAGCCAAGATTCTAAATTGGGACTGCCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487454.1 |
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| CDS TCA 72 bp | AATTTAGAATCTTGGCTCCCTCATGGATTTGCTGGGTaGTTGAGAGCACCCACTATGTGCCTCAGTTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: NLESWLPHGFAG*LRAPTMCLSSL Trigger: GAGAGAACTGAGGCACATAGTGGGTGCTCTCAATCACCCAGCAAATCCATGAGGGAGCCAAGATTCTAAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487454.1 |
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| CDS CAA 72 bp | CTGGATTTTACAGTCAGGCAGTCCCAATTTAGAATCTaGGCTCCCTCATGGATTTGCTGGGTGATTGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: LDFTVRQSQFRI*APSWICWVIES Trigger: GCTCTCAATCACCCAGCAAATCCATGAGGGAGCCAAGATTCTAAATTGGGACTGCCTGACTGTAAAATCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487454.1 |
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| CDS TCA 72 bp | CCTGAATCAGAATCTGCACTTGAACAAGGTCCCCTGTaGCCTGTATACCCATTAAAGTTTGAGAAGTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: PESESALEQGPL*PVYPLKFEKFW Trigger: CCAGAACTTCTCAAACTTTAATGGGTATACAGGTCACAGGGGACCTTGTTCAAGTGCAGATTCTGATTCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487454.1 |
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| CDS CCA 72 bp | TTAAAGTTTGAGAAGTTCTGGCTTACAGCTCATAGGTaGCTCTCTTTCCATTCTGCCCATGACTTTCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: LKFEKFWLTAHR*LSFHSAHDFPH Trigger: GTGAGGAAAGTCATGGGCAGAATGGAAAGAGAGCCACCTATGAGCTGTAAGCCAGAACTTCTCAAACTTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487454.1 |
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| CDS CCA 72 bp | AAAGCACCAAGCATAGTGTCTACTCCTTTTTATGCATaGTGTGGTGGTGGTGTAAGCAGCAGCATTAATATC | + |
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Preference number: 6 (lower is better) Translates to: KAPSIVSTPFYA*CGGGVSSSINI Trigger: GATATTAATGCTGCTGCTTACACCACCACCACACCATGCATAAAAAGGAGTAGACACTATGCTTGGTGCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000487454.1 |
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