RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CIC (Homo sapiens)

Ensembl gene IDs: ENSG00000079432

Ensembl transcript IDs: ENST00000160740.7, ENST00000571033.1, ENST00000572681.6, ENST00000573349.5, ENST00000575287.1, ENST00000575354.6, ENST00000576505.6, ENST00000681038.1, ENST00000684265.1

Found 640 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGGTACTATAAGTCCTaGCATCTTCTCAGGGGTCCC +
Preference number: 2 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGYYKS*HLLRGP
Trigger: GGGACCCCTGAGAAGATGCCAGGACTTATAGTACCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
3UTR-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGGTACTATAAGTCCTaGCATCTTCTCAGGGGTCCC +
Preference number: 2 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGYYKS*HLLRGP
Trigger: GGGACCCCTGAGAAGATGCCAGGACTTATAGTACCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCAGAGGCTGCCGGGGTaGAGGGCCAGGCCGCCCAGA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLQRLPG*RARPPR
Trigger: TCTGGGCGGCCTGGCCCTGCACCCCGGCAGCCTCTG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGGGCTGCGGGAGGCTaGCTGGTAGGCCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGAAGG*LVGLAG
Trigger: CCCAGCCAGGCCTACCAGGCAGCCTCCCGCAGCCCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCGCTGCTGCTGCGGCTaGCGCCCTGGCTCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLRCCCG*RPGSPP
Trigger: AGGAGGGGAGCCAGGGCGGCAGCCGCAGCAGCAGCG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCCAGGGAGGCCACGCTaGTGCTGCGGCTGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLPGRPR*CCGCRP
Trigger: AGGGCGGCAGCCGCAGCAGCAGCGTGGCCTCCCTGG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTACCAGTGGCAGTGGCTaGCCGGCCCCTCCACCCCGC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLTSGSG*PAPPPR
Trigger: GCGGGGTGGAGGGGCCGGCCAGCCACTGCCACTGGT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTAGCAGGTGGGGGCAGTaGGGGGCTGCTCCGGGCCGT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLSRWGQ*GAAPGR
Trigger: ACGGCCCGGAGCAGCCCCCCACTGCCCCCACCTGCT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCCGAGCTGGGTGAGGTaGGGTCAGGGCCCCCTGCGG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLPSWVR*GQGPLR
Trigger: CCGCAGGGGGCCCTGACCCCACCTCACCCAGCTCGG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTAGGGGCCGCGATGACTaGGGGGCCTGGTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLRGRDD*GAWWLQ
Trigger: CTGGAGCCACCAGGCCCCTCAGTCATCGCGGCCCCT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCCCAGCACCTGCTCCTaGGCCCGCAGTGGTCCCACC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLPSTCS*ARSGPT
Trigger: GGTGGGACCACTGCGGGCTCAGGAGCAGGTGCTGGG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCCCTCCACCCCGCACTaGCATGCTAGGGGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLPSTPH*HARGGQ
Trigger: CTGGCCGCCCCTAGCATGTCAGTGCGGGGTGGAGGG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGGACTGGGCACAGGTaGCACGCCCACCTGACCGGG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGTGHR*HAHLTG
Trigger: CCCGGTCAGGTGGGCGTGTCACCTGTGCCCAGTCCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCACCAGGCGTGGCCGTaGGTCTCCACGAGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLHQAWP*VSTSRH
Trigger: GTGGCGGCTCGTGGAGACTCACGGCCACGCCTGGTG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCAGCTGGAGGCACGGTaGTGGGCACGGGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLQLEAR*WARGLA
Trigger: TGCCAGCCCCCGTGCCCATCACCGTGCCTCCAGCTG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGGTGGCTGGCAGGTTaGTGGGCCTCGCTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGWLAG*WASLGC
Trigger: GCAGCCGAGCGAGGCCCAGCAACCTGCCAGCCACCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCCCAGGGGCAGCGCGTaGCCGCCCGCTGACTGCACA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWPRGSA*PPADCT
Trigger: TGTGCAGTCAGCGGGCGGGCACGCGCTGCCCCTGGG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCCTGAGAGCAGGGGCTaGACGAAGGCGGGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLPESRG*TKAGPL
Trigger: CAGCGGCCCCGCCTTCGTGCAGCCCCTGCTCTCAGG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160740.7
ENST00000572681.6
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTAGGACCTCCGGGGGCTaGACAGGCAGGCGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLRTSGG*TGRRQL
Trigger: CAGCTGCCGCCTGCCTGTGCAGCCCCCGGAGGTCCT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCAGAGGCTGCCGGGGTaGAGGGCCAGGCCGCCCAGA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWQRLPG*RARPPR
Trigger: TCTGGGCGGCCTGGCCCTGCACCCCGGCAGCCTCTG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCGGCTGCCCGCCCACTaGTGCTCTCGCTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLRLPAH*CSRCCH
Trigger: GTGGCAGCAGCGAGAGCAGCAGTGGGCGGGCAGCCG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTACCAGCCGCCTCCTTaGGCTCCGGGGTGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLYQPPP*APGCPR
Trigger: CCGGGGACACCCCGGAGCGCAAGGAGGCGGCTGGTA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGGCAGCCTGGGCCGTaGCAGAGTCCGAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGQPGP*QSPSWV
Trigger: CACCCAGCTCGGACTCTGGCACGGCCCAGGCTGCCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGAGGGAGACTGCCCCTaGAGCCCCTCAGCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLEGDCP*SPSAAP
Trigger: GGGGGCAGCTGAGGGGCTGCAGGGGCAGTCTCCCTC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGGCTCCCAGCGGCCTaGCTCCCCATCCCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGLPAA*LPIPFG
Trigger: CCCAAAGGGGATGGGGAGGCAGGCCGCTGGGAGCCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGGGCTGCGGGAGGCTaGCTGGTAGGCCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGAAGG*LVGLAG
Trigger: CCCAGCCAGGCCTACCAGGCAGCCTCCCGCAGCCCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCGCTGCTGCTGCGGCTaGCGCCCTGGCTCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWRCCCG*RPGSPP
Trigger: AGGAGGGGAGCCAGGGCGGCAGCCGCAGCAGCAGCG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGAGGCCACGCTGCTGCTaGGGCTGCCGCCCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWRPRCC*GCRPGS
Trigger: GGAGCCAGGGCGGCAGCCGCAGCAGCAGCGTGGCCT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCGTGCGGGCCCGGGCTaGCGGTGCTGTCCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLRAGPG*RCCPLF
Trigger: GAAAAGGGGACAGCACCGGCAGCCCGGGCCCGCACG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTAGGATCCGGGGGCCCTaGGGGCTCAGGGTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLRIRGP*GLRVQW
Trigger: CCACTGGACCCTGAGCCCCCAGGGCCCCCGGATCCT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGGCGGAGGGCACTCTaGCTCCGCCGCCCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGRRAL*LRRPLA
Trigger: AGCAAGAGGGCGGCGGAGCCAGAGTGCCCTCCGCCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCTCCTGAGCCCGCAGTaGTCCCACCACCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLLLSPQ*SHHQGP
Trigger: GGGCCCCTGGTGGTGGGACCACTGCGGGCTCAGGAG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGACCAGTGGCAGTGGCTaGCCGGCCCCTCCACCCCGC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWTSGSG*PAPPPR
Trigger: GCGGGGTGGAGGGGCCGGCCAGCCACTGCCACTGGT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGCTCACCAGTGGCAGTaGCTGGCCGGCCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLAHQWQ*LAGPST
Trigger: GGTGGAGGGGCCGGCCAGCCACTGCCACTGGTGAGC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGCGGCACCAGGCCGCTaGGTGTGCTCACAGGCACCG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLAAPGR*VCSQAP
Trigger: CGGTGCCTGTGAGCACACCCAGCGGCCTGGTGCCGC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGCTGGACGCAGGGCTaGTACCCAGGGGCAGCGCGT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGWTQG*YPGAAR
Trigger: ACGCGCTGCCCCTGGGTACCAGCCCTGCGTCCAGCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTAGGGCTAGTCGGGGCTaGGGTGGCAGTGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLRASRG*GGSGRG
Trigger: GCCCCTGCCACTGCCACCCCAGCCCCGACTAGCCCT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGAGCAGGTGGGGGCAGTaGGGGGCTGCTCCGGGCCGT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWSRWGQ*GAAPGR
Trigger: ACGGCCCGGAGCAGCCCCCCACTGCCCCCACCTGCT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTACCAGGGGCTACAGCTaGAGCTGGGGCCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLTRGYS*SWGRAG
Trigger: CCCAGCCCGGCCCCAGCTCCAGCTGTAGCCCCTGGT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCCGAGCTGGGTGAGGTaGGGTCAGGGCCCCCTGCGG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWPSWVR*GQGPLR
Trigger: CCGCAGGGGGCCCTGACCCCACCTCACCCAGCTCGG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGTCCTCTGCTGGGCCTaGAGCCGGGTCGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLVLCWA*SRVARV
Trigger: CACCCTGGCGACCCGGCTCCAGGCCCAGCAGAGGAC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGAGGTGGGTGGCCGTaGAGGCACCCCCAGGCCACT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGGGWP*RHPQAT
Trigger: AGTGGCCTGGGGGTGCCTCCACGGCCACCCACCTCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCGAGCCAGCACCCGCTaGGACCGCAGCTGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWRASTR*DRSCRR
Trigger: CCTGCGGCAGCTGCGGTCCCAGCGGGTGCTGGCTCG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTGGCTTCGGCGCACCTaGCGCACCACAGCCGGCAGG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLWLRRT*RTTAGR
Trigger: CCTGCCGGCTGTGGTGCGCCAGGTGCGCCGAAGCCA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTACGGTGCAGTGGCTGTaGGGGCTGCGGGAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLTVQWL*GLREAA
Trigger: GGCAGCCTCCCGCAGCCCCCACAGCCACTGCACCGT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCCCTGGCTCCCCTCCTaGCAGGGCGAGGGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWPWLPS*QGEGCS
Trigger: CGAGCAGCCCTCGCCCTGCCAGGAGGGGAGCCAGGG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGCGCACAGAGGGCCCTaGATCCGAGGTCAGGCCGGC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLAHRGP*IRGQAG
Trigger: GCCGGCCTGACCTCGGATCCAGGGCCCTCTGTGCGC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGATGGGCACGGGGGCTaGCAGAGGTGGGGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWDGHGG*QRWGQA
Trigger: GGCCTGCCCCCACCTCTGCCAGCCCCCGTGCCCATC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGAGGGGCCGCGATGACTaGGGGGCCTGGTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWRGRDD*GAWWLQ
Trigger: CTGGAGCCACCAGGCCCCTCAGTCATCGCGGCCCCT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGGCCCCCTGGGCAATaGACTGGACAGCAGGGGGCG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGPPGQ*TGQQGA
Trigger: CGCCCCCTGCTGTCCAGTTCATTGCCCAGGGGGCCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCCCAGCACCTGCTCCTaGGCCCGCAGTGGTCCCACC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWPSTCS*ARSGPT
Trigger: GGTGGGACCACTGCGGGCTCAGGAGCAGGTGCTGGG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCCCTCCACCCCGCACTaGCATGCTAGGGGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWPSTPH*HARGGQ
Trigger: CTGGCCGCCCCTAGCATGTCAGTGCGGGGTGGAGGG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGGACTGGGCACAGGTaGCACGCCCACCTGACCGGG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGTGHR*HAHLTG
Trigger: CCCGGTCAGGTGGGCGTGTCACCTGTGCCCAGTCCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCAGGATGGCCCGGGGTaGGGTGGCCAGAGACTGCAG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLQDGPG*GGQRLQ
Trigger: CTGCAGTCTCTGGCCACCTCACCCCGGGCCATCCTG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTGTCTTGCGGCTGAGTaGGGGCTCCCAGCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLCLAAE*GLPAAC
Trigger: GCAGGCCGCTGGGAGCCCTCACTCAGCCGCAAGACA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTGGCTGTCTTGCGGCTaGGTGAGGGCTCCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLWLSCG*VRAPSG
Trigger: GCCGCTGGGAGCCCTCACTCAGCCGCAAGACAGCCA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCACCAGGCGTGGCCGTaGGTCTCCACGAGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWHQAWP*VSTSRH
Trigger: GTGGCGGCTCGTGGAGACTCACGGCCACGCCTGGTG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCAGCTGGAGGCACGGTaGTGGGCACGGGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWQLEAR*WARGLA
Trigger: TGCCAGCCCCCGTGCCCATCACCGTGCCTCCAGCTG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGGTGGCTGGCAGGTTaGTGGGCCTCGCTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGWLAG*WASLGC
Trigger: GCAGCCGAGCGAGGCCCAGCAACCTGCCAGCCACCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCCAGGCCGCTGGGTGTaGTCACAGGCACCGGGGTCA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLPGRWV*SQAPGS
Trigger: TGACCCCGGTGCCTGTGAGCACACCCAGCGGCCTGG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGAGGACCTCCGGGGGCTaGACAGGCAGGCGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWRTSGG*TGRRQL
Trigger: CAGCTGCCGCCTGCCTGTGCAGCCCCCGGAGGTCCT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCTGCCCGCCCACTGCTaGTCTCGCTGCTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLLPAHC*SRCCHQ
Trigger: CTGGTGGCAGCAGCGAGAGCAGCAGTGGGCGGGCAG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCGGCTGCCCGCCCACTaGTGCTCTCGCTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWRLPAH*CSRCCH
Trigger: GTGGCAGCAGCGAGAGCAGCAGTGGGCGGGCAGCCG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTACCAGCCGCCTCCTTaGGCTCCGGGGTGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWYQPPP*APGCPR
Trigger: CCGGGGACACCCCGGAGCGCAAGGAGGCGGCTGGTA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGCGCTGGTCCAGGGTaGGCCGCAGGGAGGAGTATG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGAGPG*AAGRSM
Trigger: CATACTCCTCCCTGCGGCGCACCCTGGACCAGCGCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTCAGCTCCAGGGGGCTaGTCCGTGGGAGTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLSAPGG*SVGVAA
Trigger: GGCTGCCACTCCCACGGAGCAGCCCCCTGGAGCTGA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGGCAGCCTGGGCCGTaGCAGAGTCCGAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGQPGP*QSPSWV
Trigger: CACCCAGCTCGGACTCTGGCACGGCCCAGGCTGCCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGAGGGAGACTGCCCCTaGAGCCCCTCAGCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWEGDCP*SPSAAP
Trigger: GGGGGCAGCTGAGGGGCTGCAGGGGCAGTCTCCCTC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGCCGGGTCGCCAGGGTaGAGCTCCAGTGGAGGACCT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLAGSPG*SSSGGP
Trigger: AGGTCCTCCACTGGAGCTGCACCCTGGCGACCCGGC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCCCTTTGGGGTCCTCTaGTGGGCCTGGAGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLPFGVL*WAWSRV
Trigger: GACCCGGCTCCAGGCCCAGCAGAGGACCCCAAAGGG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGGCTCCCAGCGGCCTaGCTCCCCATCCCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGLPAA*LPIPFG
Trigger: CCCAAAGGGGATGGGGAGGCAGGCCGCTGGGAGCCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCCCCAGCCACCCCACTaGTGCCAGCTCCGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLPQPPH*CQLRAP
Trigger: AGGAGCACGGAGCTGGCAGCAGTGGGGTGGCTGGGG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGCCCGGGCTGCCGGTaGTGTCCCCTTTTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGPGCR*CPLFQG
Trigger: TCCCTGGAAAAGGGGACAGCACCGGCAGCCCGGGCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCGTGCGGGCCCGGGCTaGCGGTGCTGTCCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWRAGPG*RCCPLF
Trigger: GAAAAGGGGACAGCACCGGCAGCCCGGGCCCGCACG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGCTGAGAGCAGGGGCTaGACGAAGGCGGGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWAESRG*TKAGPL
Trigger: CAGCGGCCCCGCCTTCGTGCAGCCCCTGCTCTCAGC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTACGGAGGGGTCAGGCTaGCTGGGTGCCAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLTEGSG*LGARKG
Trigger: CCCCTTCCTGGCACCCAGCCAGCCTGACCCCTCCGT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTGGGGGTCCGGGTCCTaGGCTCTCAGGGCATGTGGC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLWGSGS*ALRACG
Trigger: GCCACATGCCCTGAGAGCCCAGGACCCGGACCCCCA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGAACGAGAAGCTCGGGTaGGCAGCAGCGGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWNEKLG*AAAGAA
Trigger: GGCGGCCCCCGCTGCTGCCCACCCGAGCTTCTCGTT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGAGGATCCGGGGGCCCTaGGGGCTCAGGGTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWRIRGP*GLRVQW
Trigger: CCACTGGACCCTGAGCCCCCAGGGCCCCCGGATCCT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGGCGGAGGGCACTCTaGCTCCGCCGCCCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGRRAL*LRRPLA
Trigger: AGCAAGAGGGCGGCGGAGCCAGAGTGCCCTCCGCCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTCCTGAGCCCGCAGTaGTCCCACCACCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWLLSPQ*SHHQGP
Trigger: GGGCCCCTGGTGGTGGGACCACTGCGGGCTCAGGAG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGCTCACCAGTGGCAGTaGCTGGCCGGCCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWAHQWQ*LAGPST
Trigger: GGTGGAGGGGCCGGCCAGCCACTGCCACTGGTGAGC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGCGGCACCAGGCCGCTaGGTGTGCTCACAGGCACCG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWAAPGR*VCSQAP
Trigger: CGGTGCCTGTGAGCACACCCAGCGGCCTGGTGCCGC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTCCAGGGAGTGTGGCTaGGCTCAGGGGCGGCACCAG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLSRECG*AQGRHQ
Trigger: CTGGTGCCGCCCCTGAGCCCAGCCACACTCCCTGGA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTGGGTCCAGGGAGTGTaGCTGGGCTCAGGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLWVQGV*LGSGAA
Trigger: TGCCGCCCCTGAGCCCAGCCACACTCCCTGGACCCA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGCTGGACGCAGGGCTaGTACCCAGGGGCAGCGCGT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGWTQG*YPGAAR
Trigger: ACGCGCTGCCCCTGGGTACCAGCCCTGCGTCCAGCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGCCAGCAGTGGGGCTTaGCCTGAGAGCAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLASSGA*PESRGC
Trigger: GCAGCCCCTGCTCTCAGGCCAAGCCCCACTGCTGGC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160740.7
ENST00000572681.6
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGGCTGGCGGGCCCTTaGGCAGAATGGTGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGLAGP*AEWWLQ
Trigger: CTGCAGCCACCATTCTGCCCAAGGGCCCGCCAGCCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGCAGTGGCAGGGGCTaGCGGGCCCTTGGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGSGRG*RALGQN
Trigger: ATTCTGCCCAAGGGCCCGCCAGCCCCTGCCACTGCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGAGGGCTAGTCGGGGCTaGGGTGGCAGTGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWRASRG*GGSGRG
Trigger: GCCCCTGCCACTGCCACCCCAGCCCCGACTAGCCCT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGCTGCTCCGGGCCGTaGGAGTCCAGGTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGCSGP*ESRSLA
Trigger: TGCCAGAGACCTGGACTCCCACGGCCCGGAGCAGCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCAGGGCCCTTGGCGCTaGTCCGCTCCTCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLQGPWR*SAPQQV
Trigger: CACCTGCTGAGGAGCGGACCAGCGCCAAGGGCCCTG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGACCAGGGGCTACAGCTaGAGCTGGGGCCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWTRGYS*SWGRAG
Trigger: CCCAGCCCGGCCCCAGCTCCAGCTGTAGCCCCTGGT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCTCTGGCGTCGCCGGTaGCTCCTCTCAGTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLLWRRR*LLSVAA
Trigger: CGCTGCCACTGAGAGGAGCCACCGGCGACGCCAGAG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572681.6
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTTTGGGGTCCTCTGCTaGGCCTGGAGCCGGGTCGCC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLFGVLC*AWSRVA
Trigger: GGCGACCCGGCTCCAGGCCCAGCAGAGGACCCCAAA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTACGAGTGGAGGTGGGTaGCCGTGGAGGCACCCCCAG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLTSGGG*PWRHPQ
Trigger: CTGGGGGTGCCTCCACGGCCACCCACCTCCACTCGT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTAGGGGGCCAAGGGCCTaGACCACAAGCCTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLRGPRA*TTSLSR
Trigger: CCGGCTGAGGCTTGTGGTCCAGGCCCTTGGCCCCCT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTGCACGCCCAGGTCCTaGCTTCGGCGCACCTGGCGC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWCTPRS*LRRTWR
Trigger: GCGCCAGGTGCGCCGAAGCCAGGACCTGGGCGTGCA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGCAGCAGGCGTAGGCTaGAGCGGGCCACCCACACAG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLAAGVG*SGPPTQ
Trigger: CTGTGTGGGTGGCCCGCTCCAGCCTACGCCTGCTGC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGGGCCCAGGTCTGGTaGCGTCAGCACGCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGAQVW*RQHACL
Trigger: AAGGCAGGCGTGCTGACGCCACCAGACCTGGGCCCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGTGGGGGCCCAGGTCTaGTGGCGTCAGCACGCCTGC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWVGAQV*WRQHAC
Trigger: GCAGGCGTGCTGACGCCACCAGACCTGGGCCCCCAC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGCGCACAGAGGGCCCTaGATCCGAGGTCAGGCCGGC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWAHRGP*IRGQAG
Trigger: GCCGGCCTGACCTCGGATCCAGGGCCCTCTGTGCGC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGCCAGGCTTCCCACTaGCCACCCCAGGGGGCACTG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGQASH*PPQGAL
Trigger: CAGTGCCCCCTGGGGTGGCCAGTGGGAAGCCTGGCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGCCGCACCACATTGGTaGCCATGGTGGCGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLAAPHW*PWWRQD
Trigger: GTCCTGCCGCCACCATGGTCACCAATGTGGTGCGGC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTGCCCGGTGGGAGGGTaGAACGGATGCTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLCPVGG*NGCWWW
Trigger: CCACCACCAGCATCCGTTTCACCCTCCCACCGGGCA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTGGGCCCGTACGAGGTaGCTGTTCCAGCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLWARTR*LFQPGW
Trigger: CCAGCCAGGCTGGAACAGTCACCTCGTACGGGCCCA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGCTGTGGCCTGGGCTaGCGGGAAGAAGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGCGLG*REEAMV
Trigger: GACCATGGCTTCTTCCCGTCAGCCCAGGCCACAGCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTGTCTTGCGGCTGAGTaGGGGCTCCCAGCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWCLAAE*GLPAAC
Trigger: GCAGGCCGCTGGGAGCCCTCACTCAGCCGCAAGACA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCATGCAGCCATCTCGTaGGCACAGCCGGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLHAAIS*AQPAPL
Trigger: CAGTGGCGCCGGCTGTGCTCACGAGATGGCTGCATG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTGGGGCTTGGCCTGCTaGGAGCAGGGGCTGCACGAA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLWGLAC*EQGLHE
Trigger: TTCGTGCAGCCCCTGCTCTCAGCAGGCCAAGCCCCA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTGCCCGTCTCCGACATaGTCCGCTCCCGCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLCPSPT*SAPASP
Trigger: AGGAGACGCGGGAGCGGAGCATGTCGGAGACGGGCA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCAGGGGCAGCAGCAGTaGCCGTCTCCGACATGCTCC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLQGQQQ*PSPTCS
Trigger: GGAGCATGTCGGAGACGGGCACTGCTGCTGCCCCTG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCTGCCCCACAGGAGCTaGTCCCCGGAGCCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLLPHRS*SPEPWC
Trigger: ACACCAAGGCTCCGGGGAGCAGCTCCTGTGGGGCAG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGCTCCGCCGCCCTCTTaGTCCTCCTTGTTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLAPPPS*SSLFGG
Trigger: GCCCCCAAACAAGGAGGAGCAAGAGGGCGGCGGAGC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCCAGGCCGCTGGGTGTaGTCACAGGCACCGGGGTCA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWPGRWV*SQAPGS
Trigger: TGACCCCGGTGCCTGTGAGCACACCCAGCGGCCTGG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCGATTCTCCAGGCCCTaGCCAGGGACGCGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLRFSRP*PGTRQS
Trigger: AGACTGGCGCGTCCCTGGGCAGGGCCTGGAGAATCG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTGCCCGCCCACTGCTaGTCTCGCTGCTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWLPAHC*SRCCHQ
Trigger: CTGGTGGCAGCAGCGAGAGCAGCAGTGGGCGGGCAG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGCGCTGGTCCAGGGTaGGCCGCAGGGAGGAGTATG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGAGPG*AAGRSM
Trigger: CATACTCCTCCCTGCGGCGCACCCTGGACCAGCGCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTCAGCTCCAGGGGGCTaGTCCGTGGGAGTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWSAPGG*SVGVAA
Trigger: GGCTGCCACTCCCACGGAGCAGCCCCCTGGAGCTGA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCAGGGGTCCCTCACCTaGCTGTGGCAGCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLQGSLT*LWQLWR
Trigger: CCTCCACAGCTGCCACAGGCAGGTGAGGGACCCCTG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGCCGGGTCGCCAGGGTaGAGCTCCAGTGGAGGACCT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWAGSPG*SSSGGP
Trigger: AGGTCCTCCACTGGAGCTGCACCCTGGCGACCCGGC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCCCTTTGGGGTCCTCTaGTGGGCCTGGAGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWPFGVL*WAWSRV
Trigger: GACCCGGCTCCAGGCCCAGCAGAGGACCCCAAAGGG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCCCCAGCCACCCCACTaGTGCCAGCTCCGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWPQPPH*CQLRAP
Trigger: AGGAGCACGGAGCTGGCAGCAGTGGGGTGGCTGGGG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTCCTCTGGCTCACGGTaGAGTGGCTGTGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLSSGSR*SGCGGC
Trigger: GCAGCCCCCACAGCCACTGCACCGTGAGCCAGAGGA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGCCCGGGCTGCCGGTaGTGTCCCCTTTTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGPGCR*CPLFQG
Trigger: TCCCTGGAAAAGGGGACAGCACCGGCAGCCCGGGCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCGCTCAGGTGGCGACTaGGGACTGCAGTGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLRSGGD*GLQCAG
Trigger: TCCAGCGCACTGCAGTCCGCAGTCGCCACCTGAGCG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTACAGGTGAGTCCCGCTaGACAGCAGGCACCCTGCGC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLTGESR*TAGTLR
Trigger: GCGCAGGGTGCCTGCTGTGCAGCGGGACTCACCTGT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGACGGAGGGGTCAGGCTaGCTGGGTGCCAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWTEGSG*LGARKG
Trigger: CCCCTTCCTGGCACCCAGCCAGCCTGACCCCTCCGT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTGGGGGTCCGGGTCCTaGGCTCTCAGGGCATGTGGC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWWGSGS*ALRACG
Trigger: GCCACATGCCCTGAGAGCCCAGGACCCGGACCCCCA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCCTCCTCCTCCGTGGTaGGAGGCGGACCCTTACCAG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLPPPPW*EADPYQ
Trigger: CTGGTAAGGGTCCGCCTCCCACCACGGAGGAGGAGG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTAGGCCTCCTCCTCCGTaGTGGGAGGCGGACCCTTAC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLRPPPP*WEADPY
Trigger: GTAAGGGTCCGCCTCCCACCACGGAGGAGGAGGCCT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCCCTGGGCAATGAACTaGACAGCAGGGGGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLPWAMN*TAGGAG
Trigger: CCCTGCGCCCCCTGCTGTCCAGTTCATTGCCCAGGG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGGGTACTGGCCCATTaGGGCCACTCCCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGVLAH*GHSQHL
Trigger: CAGGTGCTGGGAGTGGCCCCAATGGGCCAGTACCCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGATGCCCAGGGGTACTaGCCCATTGGGGCCACTCCC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLDAQGY*PIGATP
Trigger: GGGAGTGGCCCCAATGGGCCAGTACCCCTGGGCATC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCTTGCCCAGGGCACCTaGTTGCAGGATGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLLAQGT*LQDAQG
Trigger: CCCCTGGGCATCCTGCAACCAGGTGCCCTGGGCAAG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTCCAGGGAGTGTGGCTaGGCTCAGGGGCGGCACCAG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWSRECG*AQGRHQ
Trigger: CTGGTGCCGCCCCTGAGCCCAGCCACACTCCCTGGA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTGGGTCCAGGGAGTGTaGCTGGGCTCAGGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWWVQGV*LGSGAA
Trigger: TGCCGCCCCTGAGCCCAGCCACACTCCCTGGACCCA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGGCTGGCGGGCCCTTaGGCAGAATGGTGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGLAGP*AEWWLQ
Trigger: CTGCAGCCACCATTCTGCCCAAGGGCCCGCCAGCCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGCAGTGGCAGGGGCTaGCGGGCCCTTGGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGSGRG*RALGQN
Trigger: ATTCTGCCCAAGGGCCCGCCAGCCCCTGCCACTGCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGCTGCCTTCACTTTCTaGGGGGCCTTCGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLAAFTF*GAFGLG
Trigger: GCCCAGCCCGAAGGCCCCCCAGAAAGTGAAGGCAGC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGAGGGGCTGGTGGTGTaGGCTGCCCCTCAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLEGLVV*AAPQAQ
Trigger: CTGAGCTTGAGGGGCAGCCCACACCACCAGCCCCTC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGCTGCTCCGGGCCGTaGGAGTCCAGGTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGCSGP*ESRSLA
Trigger: TGCCAGAGACCTGGACTCCCACGGCCCGGAGCAGCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCAGGGCCCTTGGCGCTaGTCCGCTCCTCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWQGPWR*SAPQQV
Trigger: CACCTGCTGAGGAGCGGACCAGCGCCAAGGGCCCTG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTGGTCTCAGGGCCCTTaGCGCTGGTCCGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLWSQGP*RWSAPQ
Trigger: CTGAGGAGCGGACCAGCGCCAAGGGCCCTGAGACCA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCCGGGCTGGGAGGAGTaGGAGGCTCCCCACGATTCT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLPGWEE*EAPHDS
Trigger: AGAATCGTGGGGAGCCTCCCACTCCTCCCAGCCCGG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCCAGAGACTGCAGGGTaGGGGAGGGCAGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLPETAG*GRAAPP
Trigger: AGGAGGTGCTGCCCTCCCCCACCCTGCAGTCTCTGG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGTAAGAGCCCAGGATaGCCCGGGGTGAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGKSPG*PGVRWP
Trigger: TGGCCACCTCACCCCGGGCCATCCTGGGCTCTTACC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTTCGGGCCCGGACTGTaGTTGCGGCTGCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLFGPGL*LRLLCL
Trigger: GAGGCACAGCAGCCGCAACCACAGTCCGGGCCCGAA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGACGAGTGGAGGTGGGTaGCCGTGGAGGCACCCCCAG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWTSGGG*PWRHPQ
Trigger: CTGGGGGTGCCTCCACGGCCACCCACCTCCACTCGT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTAGGAACGAGTGGAGGTaGGTGGCCGTGGAGGCACCC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLRNEWR*VAVEAP
Trigger: GGGTGCCTCCACGGCCACCCACCTCCACTCGTTCCT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCCGCCGAGTGCTCGCTaGCTGTGTCAGTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLPPSAR*LCQWRR
Trigger: CCTCCTCCACTGACACAGCCAGCGAGCACTCGGCGG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGCAGCAGGCGTAGGCTaGAGCGGGCCACCCACACAG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWAAGVG*SGPPTQ
Trigger: CTGTGTGGGTGGCCCGCTCCAGCCTACGCCTGCTGC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCATCCTCGGGCTGTTTaGGGTCCAGGGCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLHPRAV*GPGQQG
Trigger: GCCCTGCTGCCCTGGACCCCAAACAGCCCGAGGATG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTGGGGTACCCAGGGCTaGAGGGTGCTTCTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLWGTQG*RVLLLA
Trigger: GGCGAGGAGAAGCACCCTCCAGCCCTGGGTACCCCA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTAAGGCGGGCATCGGCTaGGCCACGGCAGTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLKAGIG*ATAVGA
Trigger: TGCACCAACTGCCGTGGCCCAGCCGATGCCCGCCTT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCCTTGGGTAGGGCACTaGGGGACTGGGTCCGACGTT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLPWVGH*GTGSDV
Trigger: AACGTCGGACCCAGTCCCTCAGTGCCCTACCCAAGG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTCACTGGCCGCACGCTaGGAACGAGAAGCTCGGGTG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLSLAAR*EREARV
Trigger: CACCCGAGCTTCTCGTTCTCAGCGTGCGGCCAGTGA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGCCGCACCACATTGGTaGCCATGGTGGCGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWAAPHW*PWWRQD
Trigger: GTCCTGCCGCCACCATGGTCACCAATGTGGTGCGGC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGCACAGGAGTGCTGCTaGCAGGCCGCACCACATTGG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLAQECC*QAAPHW
Trigger: CCAATGTGGTGCGGCCTGTCAGCAGCACTCCTGTGC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCCGAATACACTAAGCTaGCACCCAGCGGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLPNTLS*HPAGSP
Trigger: GGGGCTCCCCGCTGGGTGTCAGCTTAGTGTATTCGG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCAAGTGTGGGGCTGGTaGGGTGGCTGCTGCCGACTT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLQVWGW*GGCCRL
Trigger: AAGTCGGCAGCAGCCACCTCACCAGCCCCACACTTG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTGCCCGGTGGGAGGGTaGAACGGATGCTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWCPVGG*NGCWWW
Trigger: CCACCACCAGCATCCGTTTCACCCTCCCACCGGGCA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCGCGTGCCCGCCCGCTaGCTGCACATAGGTGATTCT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLRVPAR*LHIGDS
Trigger: AGAATCACCTATGTGCAGTCAGCGGGCGGGCACGCG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTGGGCCCGTACGAGGTaGCTGTTCCAGCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWWARTR*LFQPGW
Trigger: CCAGCCAGGCTGGAACAGTCACCTCGTACGGGCCCA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTGGGCCCCAGCGAGGTaGAGCCTAGAGCTACAGAGC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLWAPAR*SLELQS
Trigger: GCTCTGTAGCTCTAGGCTTCACCTCGCTGGGGCCCA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGGGTCCTCGGGTGCTaGATCCAGGTCCGTGGAGTT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGVLGC*IQVRGV
Trigger: AACTCCACGGACCTGGATTCAGCACCCGAGGACCCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGCTGTGGCCTGGGCTaGCGGGAAGAAGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGCGLG*REEAMV
Trigger: GACCATGGCTTCTTCCCGTCAGCCCAGGCCACAGCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTGGGCGCTCGAGACTTaGACGTGGCTGTCTTGCGGC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLWALET*TWLSCG
Trigger: GCCGCAAGACAGCCACGTTCAAGTCTCGAGCGCCCA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCATGCAGCCATCTCGTaGGCACAGCCGGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWHAAIS*AQPAPL
Trigger: CAGTGGCGCCGGCTGTGCTCACGAGATGGCTGCATG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTGGGGCTTGGCCTGCTaGGAGCAGGGGCTGCACGAA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWWGLAC*EQGLHE
Trigger: TTCGTGCAGCCCCTGCTCTCAGCAGGCCAAGCCCCA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCAGGGGCAGCAGCAGTaGCCGTCTCCGACATGCTCC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWQGQQQ*PSPTCS
Trigger: GGAGCATGTCGGAGACGGGCACTGCTGCTGCCCCTG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTGCCCCACAGGAGCTaGTCCCCGGAGCCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWLPHRS*SPEPWC
Trigger: ACACCAAGGCTCCGGGGAGCAGCTCCTGTGGGGCAG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGCTCCGCCGCCCTCTTaGTCCTCCTTGTTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWAPPPS*SSLFGG
Trigger: GCCCCCAAACAAGGAGGAGCAAGAGGGCGGCGGAGC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCGATTCTCCAGGCCCTaGCCAGGGACGCGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWRFSRP*PGTRQS
Trigger: AGACTGGCGCGTCCCTGGGCAGGGCCTGGAGAATCG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTGCTGCTCTCGCTGCTaGCACCAGGGGCTACAGCTG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLCCSRC*HQGLQL
Trigger: CAGCTGTAGCCCCTGGTGGCAGCAGCGAGAGCAGCA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCACTGCTGCTCTCGCTaGTGCCACCAGGGGCTACAG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLHCCSR*CHQGLQ
Trigger: CTGTAGCCCCTGGTGGCAGCAGCGAGAGCAGCAGTG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCAGGGGTCCCTCACCTaGCTGTGGCAGCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWQGSLT*LWQLWR
Trigger: CCTCCACAGCTGCCACAGGCAGGTGAGGGACCCCTG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTTGGAGGAGGGAGACTaGCCCTGCAGCCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLLEEGD*PCSPSA
Trigger: AGCTGAGGGGCTGCAGGGGCAGTCTCCCTCCTCCAA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTCCAGGTCCGCCGAGTaGTCGCTGGCTGTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLSRSAE*SLAVSV
Trigger: CACTGACACAGCCAGCGAGCACTCGGCGGACCTGGA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCATAGCTGCCACTGGTaGTGCCAGGGGGCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWHSCHW*CQGAKG
Trigger: GCCCTTGGCCCCCTGGCAGCACCAGTGGCAGCTATG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGCCGCAGGTCATAGCTaGCACTGGTGCTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWAAGHS*HWCCQG
Trigger: CCCCTGGCAGCACCAGTGGCAGCTATGACCTGCGGC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCGGTCACCAGGGAACTaGACGCCCAGGTCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLRSPGN*TPRSWL
Trigger: AAGCCAGGACCTGGGCGTGCAGTTCCCTGGTGACCG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTCCTCTGGCTCACGGTaGAGTGGCTGTGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWSSGSR*SGCGGC
Trigger: GCAGCCCCCACAGCCACTGCACCGTGAGCCAGAGGA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCCCAGGGCTGGAGGGTaGTTCTCCTCGCCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWPRAGG*FSSPSS
Trigger: TGAGGAGGGCGAGGAGAAGCACCCTCCAGCCCTGGG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCCCAGTCAAACTCCGTaGTGCCCTCACGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLPSQTP*CPHGLP
Trigger: TGGCAGCCCGTGAGGGCAGCACGGAGTTTGACTGGG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGTGGCGACTGCGGACTaGAGTGCGCTGGATGACTGG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLVATAD*SALDDW
Trigger: CCAGTCATCCAGCGCACTGCAGTCCGCAGTCGCCAC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCGCTCAGGTGGCGACTaGGGACTGCAGTGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWRSGGD*GLQCAG
Trigger: TCCAGCGCACTGCAGTCCGCAGTCGCCACCTGAGCG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTGGCGTCAGCACGCCTaGCTTAGGGGTGCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWWRQHA*LRGAGA
Trigger: AGCGCCAGCACCCCTAAGGCAGGCGTGCTGACGCCA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGACAGGTGAGTCCCGCTaGACAGCAGGCACCCTGCGC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWTGESR*TAGTLR
Trigger: GCGCAGGGTGCCTGCTGTGCAGCGGGACTCACCTGT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGCCACGGCAGTTGGTaGAGCTGGAGGCACGGTGAT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGHGSW*SWRHGD
Trigger: ATCACCGTGCCTCCAGCTGCACCAACTGCCGTGGCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCCTCCTCCTCCGTGGTaGGAGGCGGACCCTTACCAG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWPPPPW*EADPYQ
Trigger: CTGGTAAGGGTCCGCCTCCCACCACGGAGGAGGAGG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGAGGCCTCCTCCTCCGTaGTGGGAGGCGGACCCTTAC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWRPPPP*WEADPY
Trigger: GTAAGGGTCCGCCTCCCACCACGGAGGAGGAGGCCT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTAGGGCACTGAGGGACTaGGTCCGACGTTTTCCGGGC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLRALRD*VRRFPG
Trigger: GCCCGGAAAACGTCGGACCCAGTCCCTCAGTGCCCT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCCAGTGAGAAGGAGGTaGCTGCCGAGGCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLPVRRR*LPRLRR
Trigger: CCTCCTCAGCCTCGGCAGCCACCTCCTTCTCACTGG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGAACCGGGTTGCCTTaGAAGGTGTCGCTGGACCCC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGTGLP*KVSLDP
Trigger: GGGGTCCAGCGACACCTTCCAAGGCAACCCGGTTCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCCACCAGGGGCCCCCTaGGCAATGAACTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLPPGAP*AMNWTA
Trigger: TGCTGTCCAGTTCATTGCCCAGGGGGCCCCTGGTGG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGGGTACTGGCCCATTaGGGCCACTCCCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGVLAH*GHSQHL
Trigger: CAGGTGCTGGGAGTGGCCCCAATGGGCCAGTACCCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGCCCAGGGCACCTaGTTGCAGGATGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWLAQGT*LQDAQG
Trigger: CCCCTGGGCATCCTGCAACCAGGTGCCCTGGGCAAG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGACTTTGCCGTTGGTaGAAGTGCCCGGTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGLCRW*KCPVGG
Trigger: CCCTCCCACCGGGCACTTCCACCAACGGCAAAGTCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCTGTTCCAGCCTGGCTaGACGCAGGGCTGGTACCCA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLLFQPG*TQGWYP
Trigger: TGGGTACCAGCCCTGCGTCCAGCCAGGCTGGAACAG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGCCCTTGGGCAGAATaGTGGCTGCAGGTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGPWAE*WLQVGL
Trigger: CAACCCCACCTGCAGCCACCATTCTGCCCAAGGGCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTGGGCCGCTGGGCCTTaGGGGCCACTAAGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWWAAGP*GPLSCR
Trigger: CCTACAGCTTAGTGGCCCCCAAGGCCCAGCGGCCCA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGCTGCCTTCACTTTCTaGGGGGCCTTCGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWAAFTF*GAFGLG
Trigger: GCCCAGCCCGAAGGCCCCCCAGAAAGTGAAGGCAGC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTAGACTCTGGGGCAGTTaGCTCTCGGACTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLRLWGS*LSDWAR
Trigger: CCTGGCCCAGTCCGAGAGCCAACTGCCCCAGAGTCT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGAGGGGCTGGTGGTGTaGGCTGCCCCTCAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWEGLVV*AAPQAQ
Trigger: CTGAGCTTGAGGGGCAGCCCACACCACCAGCCCCTC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTGGTCTCAGGGCCCTTaGCGCTGGTCCGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWWSQGP*RWSAPQ
Trigger: CTGAGGAGCGGACCAGCGCCAAGGGCCCTGAGACCA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCCGGGCTGGGAGGAGTaGGAGGCTCCCCACGATTCT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWPGWEE*EAPHDS
Trigger: AGAATCGTGGGGAGCCTCCCACTCCTCCCAGCCCGG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCCAGAGACTGCAGGGTaGGGGAGGGCAGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWPETAG*GRAAPP
Trigger: AGGAGGTGCTGCCCTCCCCCACCCTGCAGTCTCTGG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGTAAGAGCCCAGGATaGCCCGGGGTGAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGKSPG*PGVRWP
Trigger: TGGCCACCTCACCCCGGGCCATCCTGGGCTCTTACC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTGCGCTTGGGCGAGGTaGGGTCCTCGGGTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLCAWAR*GPRVLN
Trigger: ATTCAGCACCCGAGGACCCCACCTCGCCCAAGCGCA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCCGTATTCCTGGCTCTaGCGTCGCCGGTGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWPYSWL*RRRWLL
Trigger: GAGGAGCCACCGGCGACGCCAGAGCCAGGAATACGG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572681.6
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGTCCACCCGTATTCCTaGCTCTGGCGTCGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWVHPYS*LWRRRW
Trigger: CCACCGGCGACGCCAGAGCCAGGAATACGGGTGGAC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572681.6
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTTCGGGCCCGGACTGTaGTTGCGGCTGCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWFGPGL*LRLLCL
Trigger: GAGGCACAGCAGCCGCAACCACAGTCCGGGCCCGAA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTAGGGTGCAGCTCCAGTaGAGGACCTTCAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLRVQLQ*RTFSPR
Trigger: CCTGGGGCTGAAGGTCCTCCACTGGAGCTGCACCCT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGAGGAACGAGTGGAGGTaGGTGGCCGTGGAGGCACCC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWRNEWR*VAVEAP
Trigger: GGGTGCCTCCACGGCCACCCACCTCCACTCGTTCCT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCCGCCGAGTGCTCGCTaGCTGTGTCAGTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWPPSAR*LCQWRR
Trigger: CCTCCTCCACTGACACAGCCAGCGAGCACTCGGCGG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCCACACAGCCTCCTCTaGCTCACGGTGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLPHSLL*LTVQWL
Trigger: CAGCCACTGCACCGTGAGCCAGAGGAGGCTGTGTGG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGGGCTTCCTCAGCATaGTCTCAGGTTCCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGASSA*SQVPRG
Trigger: CCCCCTGGGAACCTGAGACCATGCTGAGGAAGCCCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCATCCTCGGGCTGTTTaGGGTCCAGGGCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWHPRAV*GPGQQG
Trigger: GCCCTGCTGCCCTGGACCCCAAACAGCCCGAGGATG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTGGGGTACCCAGGGCTaGAGGGTGCTTCTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWWGTQG*RVLLLA
Trigger: GGCGAGGAGAAGCACCCTCCAGCCCTGGGTACCCCA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGAGCCGCCACACTGCTaGCCTCACTGTCCCTCGACG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWEPPHC*PHCPST
Trigger: CGTCGAGGGACAGTGAGGCCAGCAGTGTGGCGGCTC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGTGCTGGCGCTCAGGTaGCGACTGCGGACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWVLALR*RLRTAV
Trigger: CACTGCAGTCCGCAGTCGCCACCTGAGCGCCAGCAC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGCCCCCAAGGCCCCTaGATGCGGCAACAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGPQGP*MRQQLC
Trigger: ACAGAGCTGTTGCCGCATCCAGGGGCCTTGGGGGCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTACTCTTGGGAAAGTCTaGGGCGGCTCCTCCACCCCC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLTLGKV*GGSSTP
Trigger: GGGGGTGGAGGAGCCGCCCCAGACTTTCCCAAGAGT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGCAGTTGGTGCAGCTaGAGGCACGGTGATGGGCAC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGSWCS*RHGDGH
Trigger: GTGCCCATCACCGTGCCTCCAGCTGCACCAACTGCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCCTTGGGTAGGGCACTaGGGGACTGGGTCCGACGTT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWPWVGH*GTGSDV
Trigger: AACGTCGGACCCAGTCCCTCAGTGCCCTACCCAAGG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTTGTCCTGGTTGGGATaGCGCTGGTGGACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWLSWLG*RWWTRA
Trigger: GGCCCTGGTCCACCAGCGTCATCCCAACCAGGACAA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTCACTGGCCGCACGCTaGGAACGAGAAGCTCGGGTG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWSLAAR*EREARV
Trigger: CACCCGAGCTTCTCGTTCTCAGCGTGCGGCCAGTGA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGCACAGGAGTGCTGCTaGCAGGCCGCACCACATTGG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWAQECC*QAAPHW
Trigger: CCAATGTGGTGCGGCCTGTCAGCAGCACTCCTGTGC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCCGAATACACTAAGCTaGCACCCAGCGGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWPNTLS*HPAGSP
Trigger: GGGGCTCCCCGCTGGGTGTCAGCTTAGTGTATTCGG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCAAGTGTGGGGCTGGTaGGGTGGCTGCTGCCGACTT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWQVWGW*GGCCRL
Trigger: AAGTCGGCAGCAGCCACCTCACCAGCCCCACACTTG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCGCGTGCCCGCCCGCTaGCTGCACATAGGTGATTCT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWRVPAR*LHIGDS
Trigger: AGAATCACCTATGTGCAGTCAGCGGGCGGGCACGCG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTGGGCCCCAGCGAGGTaGAGCCTAGAGCTACAGAGC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWWAPAR*SLELQS
Trigger: GCTCTGTAGCTCTAGGCTTCACCTCGCTGGGGCCCA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGGGTCCTCGGGTGCTaGATCCAGGTCCGTGGAGTT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGVLGC*IQVRGV
Trigger: AACTCCACGGACCTGGATTCAGCACCCGAGGACCCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGAGTGGCAGCCTGCATaGTCTTCTGGCGCACCTCAC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLEWQPA*SSGAPH
Trigger: GTGAGGTGCGCCAGAAGATCATGCAGGCTGCCACTC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGCCACTGCCAGGACCTaGAAGGCCAGTGCATGCCTT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLATART*KASACL
Trigger: AAGGCATGCACTGGCCTTTCAGGTCCTGGCAGTGGC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTGGGCGCTCGAGACTTaGACGTGGCTGTCTTGCGGC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWWALET*TWLSCG
Trigger: GCCGCAAGACAGCCACGTTCAAGTCTCGAGCGCCCA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTCGCCCTCCTCACAGTaGGTACCCAGGTTGCCACCA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLSPSSQ*VPRLPP
Trigger: TGGTGGCAACCTGGGTACTCACTGTGAGGAGGGCGA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGTAGCCTCGCCGCTGTaGCTCCTTCATGCAGCCATC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLVASPL*LLHAAI
Trigger: GATGGCTGCATGAAGGAGTCACAGCGGCGAGGCTAC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGCGAGAAGGGCGATTaGGTGGAGACGGGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGEKGD*VETGEK
Trigger: CTTCTCACCCGTCTCCACTCAATCGCCCTTCTCGCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGCGGACAATAACAGGTaGGTCCCGCTGCACAGCAGG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLADNNR*VPLHSR
Trigger: CCTGCTGTGCAGCGGGACTCACCTGTTATTGTCCGC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGCACCCGAGACCCAGTaGCCATTTCAGTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLAPETQ*PFQSWH
Trigger: GTGCCAGGACTGAAATGGGCACTGGGTCTCGGGTGC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCACCTGGTTGCAGGATaGCCAGGGGTACTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLHLVAG*PGVLAH
Trigger: ATGGGCCAGTACCCCTGGGCATCCTGCAACCAGGTG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCCCAGGGCACCTGGTTaGAGGATGCCCAGGGGTACT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWPRAPG*RMPRGT
Trigger: AGTACCCCTGGGCATCCTGCAACCAGGTGCCCTGGG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTGGCAGCCAGGACTTTaGCGTTGGTGGAAGTGCCCG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLWQPGL*RWWKCP
Trigger: CGGGCACTTCCACCAACGGCAAAGTCCTGGCTGCCA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTACTGCAGGATGGGGATaGCAGGAGTGGGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLTAGWG*QEWVQW
Trigger: CCACTGCACCCACTCCTGGCATCCCCATCCTGCAGT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTAGGACCCCACGGGAATaGTGGCGATGGCTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLRTPRE*WRWLPS
Trigger: TGAAGGCAGCCATCGCCAGCATTCCCGTGGGGTCCT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGCTGGTGGTGTGGGCTaGCCCTCAAGCTCAGACTCT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLAGGVG*PSSSDS
Trigger: AGAGTCTGAGCTTGAGGGGCAGCCCACACCACCAGC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTGCTGCTCTCGCTGCTaGCACCAGGGGCTACAGCTG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWCCSRC*HQGLQL
Trigger: CAGCTGTAGCCCCTGGTGGCAGCAGCGAGAGCAGCA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCACTGCTGCTCTCGCTaGTGCCACCAGGGGCTACAG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWHCCSR*CHQGLQ
Trigger: CTGTAGCCCCTGGTGGCAGCAGCGAGAGCAGCAGTG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTTGGAGGAGGGAGACTaGCCCTGCAGCCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWLEEGD*PCSPSA
Trigger: AGCTGAGGGGCTGCAGGGGCAGTCTCCCTCCTCCAA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCACCACCCTCCAGCTTaGAGCCCTCACAGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLHHPPA*SPHRSH
Trigger: ATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTGGTG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGGACTTGCTGCCACTaGCAGGACCTGAAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGTCCH*QDLKGQ
Trigger: CTGGCCTTTCAGGTCCTGGCAGTGGCAGCAAGTCCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTGGTTGCGGCTGCTGTaGCTCGTCATCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLWLRLL*LVILLL
Trigger: GAGGAGGAGGATGACGAGGCACAGCAGCCGCAACCA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGACTGTGGTTGCGGCTaGTGTGCCTCGTCATCCTCC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLDCGCG*CASSSS
Trigger: GGAGGATGACGAGGCACAGCAGCCGCAACCACAGTC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTCCAGGTCCGCCGAGTaGTCGCTGGCTGTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWSRSAE*SLAVSV
Trigger: CACTGACACAGCCAGCGAGCACTCGGCGGACCTGGA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCGGTCACCAGGGAACTaGACGCCCAGGTCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWRSPGN*TPRSWL
Trigger: AAGCCAGGACCTGGGCGTGCAGTTCCCTGGTGACCG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTAGGTACAGACAGCTGTaGCCACCACCAGGGCACCTG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLRYRQL*PPPGHL
Trigger: CAGGTGCCCTGGTGGTGGGCACAGCTGTCTGTACCT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGAGTCAAACTCCGTGCTaGCCTCACGGGCTGCCACGG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWSQTPC*PHGLPR
Trigger: CCGTGGCAGCCCGTGAGGGCAGCACGGAGTTTGACT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCCCAGTCAAACTCCGTaGTGCCCTCACGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWPSQTP*CPHGLP
Trigger: TGGCAGCCCGTGAGGGCAGCACGGAGTTTGACTGGG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGCCACGGCAGTTGGTaGAGCTGGAGGCACGGTGAT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGHGSW*SWRHGD
Trigger: ATCACCGTGCCTCCAGCTGCACCAACTGCCGTGGCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGAGGGGTCAGGCTGGCTaGGTGCCAGGAAGGGGACTA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWRGQAG*VPGRGL
Trigger: TAGTCCCCTTCCTGGCACCCAGCCAGCCTGACCCCT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGAGGGCACTGAGGGACTaGGTCCGACGTTTTCCGGGC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWRALRD*VRRFPG
Trigger: GCCCGGAAAACGTCGGACCCAGTCCCTCAGTGCCCT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTATGGGCCGCCGGATGTaGTCCTTCTCCCGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLMGRRM*SFSRLL
Trigger: CAACAAGCGGGAGAAGGACCACATCCGGCGGCCCAT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGGTGGGCCTTGAAGTaGGCCTCCTTCACCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGWALK*ASFTWK
Trigger: CTTCCAGGTGAAGGAGGCCCACTTCAAGGCCCACCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCCAGTGAGAAGGAGGTaGCTGCCGAGGCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWPVRRR*LPRLRR
Trigger: CCTCCTCAGCCTCGGCAGCCACCTCCTTCTCACTGG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGAACCGGGTTGCCTTaGAAGGTGTCGCTGGACCCC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGTGLP*KVSLDP
Trigger: GGGGTCCAGCGACACCTTCCAAGGCAACCCGGTTCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGTGGGGCTGGTGAGGTaGCTGCTGCCGACTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLVGLVR*LLPTSC
Trigger: ACAAGAAGTCGGCAGCAGCCACCTCACCAGCCCCAC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGTGGAAGTGCCCGGTaGGAGGGTGAAACGGATGCT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGGSAR*EGETDA
Trigger: AGCATCCGTTTCACCCTCCCACCGGGCACTTCCACC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCCAGGACTTTGCCGTTaGTGGAAGTGCCCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLPGLCR*WKCPVG
Trigger: TCCCACCGGGCACTTCCACCAACGGCAAAGTCCTGG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCAGGAGTGGGTGCAGTaGCAGCCAGGACTTTGCCGT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLQEWVQ*QPGLCR
Trigger: ACGGCAAAGTCCTGGCTGCCACTGCACCCACTCCTG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTCTGAGGCTGAGAGGTaGGTCCAGGGAGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLSEAER*VQGVWL
Trigger: CAGCCACACTCCCTGGACCCACCTCTCAGCCTCAGA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTGTTCCAGCCTGGCTaGACGCAGGGCTGGTACCCA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWLFQPG*TQGWYP
Trigger: TGGGTACCAGCCCTGCGTCCAGCCAGGCTGGAACAG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGTGGGGTTGTGCTGGTaGCCACAGTGTAGACCAGGC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLVGLCW*PQCRPG
Trigger: GCCTGGTCTACACTGTGGCCACCAGCACAACCCCAC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCCTTGGGCAGAATGGTaGCTGCAGGTGGGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLPWAEW*LQVGLC
Trigger: GCACAACCCCACCTGCAGCCACCATTCTGCCCAAGG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGCCCTTGGGCAGAATaGTGGCTGCAGGTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGPWAE*WLQVGL
Trigger: CAACCCCACCTGCAGCCACCATTCTGCCCAAGGGCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGAGACTCTGGGGCAGTTaGCTCTCGGACTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWRLWGS*LSDWAR
Trigger: CCTGGCCCAGTCCGAGAGCCAACTGCCCCAGAGTCT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGAATTTGCTGGCCATaGTCTCAGGGCCCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGICWP*SQGPWR
Trigger: GCGCCAAGGGCCCTGAGACCATGGCCAGCAAATTCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTGCGCTTGGGCGAGGTaGGGTCCTCGGGTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWCAWAR*GPRVLN
Trigger: ATTCAGCACCCGAGGACCCCACCTCGCCCAAGCGCA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTGGAGGAGGAACGAGTaGAGGTGGGTGGCCGTGGAG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWWRRNE*RWVAVE
Trigger: CTCCACGGCCACCCACCTCCACTCGTTCCTCCTCCA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCACCAGGGCACCTGGTaGGGGTGTGGCATCCAAAAC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLHQGTW*GCGIQN
Trigger: GTTTTGGATGCCACACCCCCACCAGGTGCCCTGGTG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCACCACCAGGGCACCTaGTGGGGGTGTGGCATCCAA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWHHQGT*WGCGIQ
Trigger: TTGGATGCCACACCCCCACCAGGTGCCCTGGTGGTG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTGTAGGCAGCTGGCTTaGTGGCCACCTCCACCACCA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLCRQLA*WPPPPP
Trigger: TGGTGGTGGAGGTGGCCACCAAGCCAGCTGCCTACA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGACCTTGTAGGCAGCTaGCTTGGTGGCCACCTCCAC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLDLVGS*LGGHLH
Trigger: GTGGAGGTGGCCACCAAGCCAGCTGCCTACAAGGTC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCCACACAGCCTCCTCTaGCTCACGGTGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWPHSLL*LTVQWL
Trigger: CAGCCACTGCACCGTGAGCCAGAGGAGGCTGTGTGG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGGGCTTCCTCAGCATaGTCTCAGGTTCCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGASSA*SQVPRG
Trigger: CCCCCTGGGAACCTGAGACCATGCTGAGGAAGCCCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGACTCTTGGGAAAGTCTaGGGCGGCTCCTCCACCCCC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWTLGKV*GGSSTP
Trigger: GGGGGTGGAGGAGCCGCCCCAGACTTTCCCAAGAGT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGCAGTTGGTGCAGCTaGAGGCACGGTGATGGGCAC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGSWCS*RHGDGH
Trigger: GTGCCCATCACCGTGCCTCCAGCTGCACCAACTGCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTAATCTGGGTGGGCCTTaGAGTGGGCCTCCTTCACCT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLNLGGP*SGPPSP
Trigger: AGGTGAAGGAGGCCCACTTCAAGGCCCACCCAGATT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTAGTTCCTGTAGCGCCTaGCTGTCTACTTCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLSSCSA*LSTSPP
Trigger: CGGCGGAGAAGTAGACAGTCAGGCGCTACAGGAACT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTATTCTGCACAGGTACTaGGAAGGGCGGGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLILHRY*EGRAHQ
Trigger: CTGGTGAGCCCGCCCTTCTCAGTACCTGTGCAGAAT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGAGTGGCAGCCTGCATaGTCTTCTGGCGCACCTCAC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWEWQPA*SSGAPH
Trigger: GTGAGGTGCGCCAGAAGATCATGCAGGCTGCCACTC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGCCACTGCCAGGACCTaGAAGGCCAGTGCATGCCTT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWATART*KASACL
Trigger: AAGGCATGCACTGGCCTTTCAGGTCCTGGCAGTGGC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGCGAGAAGGGCGATTaGGTGGAGACGGGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGEKGD*VETGEK
Trigger: CTTCTCACCCGTCTCCACTCAATCGCCCTTCTCGCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCACAGGCTGAAAGGGTaGAGAAGCCAGGCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLHRLKG*RSQAKG
Trigger: GCCTTTGGCCTGGCTTCTTCACCCTTTCAGCCTGTG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGCACCCGAGACCCAGTaGCCATTTCAGTCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWAPETQ*PFQSWH
Trigger: GTGCCAGGACTGAAATGGGCACTGGGTCTCGGGTGC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCACCTGGTTGCAGGATaGCCAGGGGTACTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWHLVAG*PGVLAH
Trigger: ATGGGCCAGTACCCCTGGGCATCCTGCAACCAGGTG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTGGCAGCCAGGACTTTaGCGTTGGTGGAAGTGCCCG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWWQPGL*RWWKCP
Trigger: CGGGCACTTCCACCAACGGCAAAGTCCTGGCTGCCA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGACTGCAGGATGGGGATaGCAGGAGTGGGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWTAGWG*QEWVQW
Trigger: CCACTGCACCCACTCCTGGCATCCCCATCCTGCAGT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGCTGGGCACCATTCTaGACAGGTACTGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGWAPF*TGTEKG
Trigger: GCCCTTCTCAGTACCTGTGCAGAATGGTGCCCAGCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCTGCAGGTGGGGTTGTaGTGGTGGCCACAGTGTAGA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLLQVGL*WWPQCR
Trigger: TCTACACTGTGGCCACCAGCACAACCCCACCTGCAG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGAGGACCCCACGGGAATaGTGGCGATGGCTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWRTPRE*WRWLPS
Trigger: TGAAGGCAGCCATCGCCAGCATTCCCGTGGGGTCCT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGCTGGTGGTGTGGGCTaGCCCTCAAGCTCAGACTCT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWAGGVG*PSSSDS
Trigger: AGAGTCTGAGCTTGAGGGGCAGCCCACACCACCAGC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTGTTGGGCTCCGAGCTaGAGCTGGAGCGTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLCWAPS*SWSVFS
Trigger: TGAGAAGACGCTCCAGCTGCAGCTCGGAGCCCAACA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCACCACCCTCCAGCTTaGAGCCCTCACAGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWHHPPA*SPHRSH
Trigger: ATGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTGGTG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGGACTTGCTGCCACTaGCAGGACCTGAAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGTCCH*QDLKGQ
Trigger: CTGGCCTTTCAGGTCCTGGCAGTGGCAGCAAGTCCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCCCTTCTTGTACTTCTaGTGGGCGGCTGTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLPFLYF*WAAVSG
Trigger: GCCACTGACAGCCGCCCAGCAGAAGTACAAGAAGGG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGCCAGGCCCACTGTCTaGCAGGCCTTCCATCTCTTT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLARPTV*QAFHLF
Trigger: AAAGAGATGGAAGGCCTGGCAGACAGTGGGCCTGGC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCCCAAGGCCCCTGGATaGGGCAACAGCTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWPKAPG*GNSSVF
Trigger: GAAGACAGAGCTGTTGCCGCATCCAGGGGCCTTGGG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGTGGCTGGTATAGCTaGTGGGCACCAAAACGGGCA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGGWYS*WAPKRA
Trigger: TGCCCGTTTTGGTGCCCAGCAGCTATACCAGCCACC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGATGGGCCGCCGGATGTaGTCCTTCTCCCGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWMGRRM*SFSRLL
Trigger: CAACAAGCGGGAGAAGGACCACATCCGGCGGCCCAT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTACTTCTGCTTCTCCTTaGGCCCCAGGGCATACCACC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLTSASP*APGHTT
Trigger: GGTGGTATGCCCTGGGGCCCAAGGAGAAGCAGAAGT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCACTTCCAATCTGGGTaGGCCTTGAAGTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLHFQSG*ALKWAS
Trigger: GGAGGCCCACTTCAAGGCCCACCCAGATTGGAAGTG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTGCTCCCCGGAGCCTTaGTGTCTGAGCTCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWCSPEP*CLSSGV
Trigger: CACTCCTGAGCTCAGACACCAAGGCTCCGGGGAGCA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTCGTCATGTCCTCACTaGCCGCACGCTGAGAACGAG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLSSCPH*PHAENE
Trigger: CTCGTTCTCAGCGTGCGGCCAGTGAGGACATGACGA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGACGCAGAGGAGGATaGGGCGGAACCATAGCCTTT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGRRGG*GGTIAF
Trigger: AAAGGCTATGGTTCCGCCCCATCCTCCTCTGCGTCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGACCTGCTGTGTCATTTaGAGACGCCTCAGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWTCCVI*RRLSPA
Trigger: GGCCGGGCTGAGGCGTCTCCAAATGACACAGCAGGT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGTGGGGCTGGTGAGGTaGCTGCTGCCGACTTCTTGT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWVGLVR*LLPTSC
Trigger: ACAAGAAGTCGGCAGCAGCCACCTCACCAGCCCCAC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGTGGAAGTGCCCGGTaGGAGGGTGAAACGGATGCT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGGSAR*EGETDA
Trigger: AGCATCCGTTTCACCCTCCCACCGGGCACTTCCACC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCCAGGACTTTGCCGTTaGTGGAAGTGCCCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWPGLCR*WKCPVG
Trigger: TCCCACCGGGCACTTCCACCAACGGCAAAGTCCTGG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCAGGAGTGGGTGCAGTaGCAGCCAGGACTTTGCCGT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWQEWVQ*QPGLCR
Trigger: ACGGCAAAGTCCTGGCTGCCACTGCACCCACTCCTG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGTACAGACTGCAGGATaGGGATGCCAGGAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLVQTAG*GCQEWV
Trigger: CACCCACTCCTGGCATCCCCATCCTGCAGTCTGTAC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTCTGAGGCTGAGAGGTaGGTCCAGGGAGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWSEAER*VQGVWL
Trigger: CAGCCACACTCCCTGGACCCACCTCTCAGCCTCAGA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGTGGGGTTGTGCTGGTaGCCACAGTGTAGACCAGGC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWVGLCW*PQCRPG
Trigger: GCCTGGTCTACACTGTGGCCACCAGCACAACCCCAC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCAGGTGGGGTTGTGCTaGTGGCCACAGTGTAGACCA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLQVGLC*WPQCRP
Trigger: TGGTCTACACTGTGGCCACCAGCACAACCCCACCTG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCCTTGGGCAGAATGGTaGCTGCAGGTGGGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWPWAEW*LQVGLC
Trigger: GCACAACCCCACCTGCAGCCACCATTCTGCCCAAGG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCGGGAATGCTGGCGATaGCTGCCTTCACTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLRECWR*LPSLSG
Trigger: CCCAGAAAGTGAAGGCAGCCATCGCCAGCATTCCCG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTACCCCACGGGAATGCTaGCGATGGCTGCCTTCACTT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLTPREC*RWLPSL
Trigger: AAGTGAAGGCAGCCATCGCCAGCATTCCCGTGGGGT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCTCAAGCTCAGACTCTaGGGCAGTTGGCTCTCGGAC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLLKLRL*GSWLSD
Trigger: GTCCGAGAGCCAACTGCCCCAGAGTCTGAGCTTGAG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGAATTTGCTGGCCATaGTCTCAGGGCCCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGICWP*SQGPWR
Trigger: GCGCCAAGGGCCCTGAGACCATGGCCAGCAAATTCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCGCTGGCTGTGTCAGTaGAGGAGGAACGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWRWLCQ*RRNEWR
Trigger: CCTCCACTCGTTCCTCCTCCACTGACACAGCCAGCG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCACCAGGGCACCTGGTaGGGGTGTGGCATCCAAAAC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWHQGTW*GCGIQN
Trigger: GTTTTGGATGCCACACCCCCACCAGGTGCCCTGGTG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTGTAGGCAGCTGGCTTaGTGGCCACCTCCACCACCA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWCRQLA*WPPPPP
Trigger: TGGTGGTGGAGGTGGCCACCAAGCCAGCTGCCTACA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCGGACTGCAGTGCGCTaGATGACTGGTGAGGCATTG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLRTAVR*MTGEAL
Trigger: CAATGCCTCACCAGTCATCCAGCGCACTGCAGTCCG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCCTCCCCAGGGAATTTaGAGGGCAGTGGCACATCAG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLPPQGI*RAVAHQ
Trigger: CTGATGTGCCACTGCCCTCCAAATTCCCTGGGGAGG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGAATCTGGGTGGGCCTTaGAGTGGGCCTCCTTCACCT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWNLGGP*SGPPSP
Trigger: AGGTGAAGGAGGCCCACTTCAAGGCCCACCCAGATT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGAGTTCCTGTAGCGCCTaGCTGTCTACTTCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWSSCSA*LSTSPP
Trigger: CGGCGGAGAAGTAGACAGTCAGGCGCTACAGGAACT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTGTACTGTACCTGGGTaGTTCCCCCAGCCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWCTVPG*FPQPCP
Trigger: TGGGCAAGGCTGGGGGAATCACCCAGGTACAGTACA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGATTCTGCACAGGTACTaGGAAGGGCGGGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWILHRY*EGRAHQ
Trigger: CTGGTGAGCCCGCCCTTCTCAGTACCTGTGCAGAAT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCTGACTGCACATAGGTaGTTCTGGTGGAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLLTAHR*FWWRRA
Trigger: TGCCCTCCTCCACCAGAATCACCTATGTGCAGTCAG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCTGTACGGTCAAAGGTaGAGATGTCCCCCTCGCACT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLLYGQR*RCPPRT
Trigger: AGTGCGAGGGGGACATCTTCACCTTTGACCGTACAG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCACAGGCTGAAAGGGTaGAGAAGCCAGGCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWHRLKG*RSQAKG
Trigger: GCCTTTGGCCTGGCTTCTTCACCCTTTCAGCCTGTG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTGGAAGGCCACAGGCTaGAAGGGTGAAGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWWKATG*KGEEAR
Trigger: CCTGGCTTCTTCACCCTTTCAGCCTGTGGCCTTCCA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGCTGGGCACCATTCTaGACAGGTACTGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGWAPF*TGTEKG
Trigger: GCCCTTCTCAGTACCTGTGCAGAATGGTGCCCAGCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTGCAGGTGGGGTTGTaGTGGTGGCCACAGTGTAGA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWLQVGL*WWPQCR
Trigger: TCTACACTGTGGCCACCAGCACAACCCCACCTGCAG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTATGAGCTGGGGAATTTaGTGGCCATGGTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLMSWGI*WPWSQG
Trigger: GCCCTGAGACCATGGCCAGCAAATTCCCCAGCTCAT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGCACCTTCACCTTCTTaGCAGTACCAGCCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWAPSPS*QYQPPP
Trigger: AGGAGGCGGCTGGTACTGGCAAGAAGGTGAAGGTGC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTGTTGGGCTCCGAGCTaGAGCTGGAGCGTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWCWAPS*SWSVFS
Trigger: TGAGAAGACGCTCCAGCTGCAGCTCGGAGCCCAACA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCCCTTCTTGTACTTCTaGTGGGCGGCTGTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWPFLYF*WAAVSG
Trigger: GCCACTGACAGCCGCCCAGCAGAAGTACAAGAAGGG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGTATTCCGCTGGGTGTaGAGACCACATCGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLVFRWV*RPHRPS
Trigger: AGAAGGGCGATGTGGTCTGCACACCCAGCGGAATAC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCACAGCCGGCGCCACTaGTTGCCGTTGAACTTCTTT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLHSRRH*LPLNFF
Trigger: AAAGAAGTTCAACGGCAAGCAGTGGCGCCGGCTGTG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGCCAGGCCCACTGTCTaGCAGGCCTTCCATCTCTTT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWARPTV*QAFHLF
Trigger: AAAGAGATGGAAGGCCTGGCAGACAGTGGGCCTGGC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGTGGCTGGTATAGCTaGTGGGCACCAAAACGGGCA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGGWYS*WAPKRA
Trigger: TGCCCGTTTTGGTGCCCAGCAGCTATACCAGCCACC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGACTTCTGCTTCTCCTTaGGCCCCAGGGCATACCACC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWTSASP*APGHTT
Trigger: GGTGGTATGCCCTGGGGCCCAAGGAGAAGCAGAAGT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCACTTCCAATCTGGGTaGGCCTTGAAGTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWHFQSG*ALKWAS
Trigger: GGAGGCCCACTTCAAGGCCCACCCAGATTGGAAGTG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGCACCACTTCCAATCTaGGTGGGCCTTGAAGTGGGC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWAPLPI*VGLEVG
Trigger: GCCCACTTCAAGGCCCACCCAGATTGGAAGTGGTGC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTCGTCATGTCCTCACTaGCCGCACGCTGAGAACGAG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWSSCPH*PHAENE
Trigger: CTCGTTCTCAGCGTGCGGCCAGTGAGGACATGACGA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGACGCAGAGGAGGATaGGGCGGAACCATAGCCTTT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGRRGG*GGTIAF
Trigger: AAAGGCTATGGTTCCGCCCCATCCTCCTCTGCGTCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTTGCTCCTCCTTGTTTaGGGGCAGCACCAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLLLLLV*GQHQCL
Trigger: CAGACACTGGTGCTGCCCCCAAACAAGGAGGAGCAA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGTACAGACTGCAGGATaGGGATGCCAGGAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWVQTAG*GCQEWV
Trigger: CACCCACTCCTGGCATCCCCATCCTGCAGTCTGTAC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCAGGTGGGGTTGTGCTaGTGGCCACAGTGTAGACCA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWQVGLC*WPQCRP
Trigger: TGGTCTACACTGTGGCCACCAGCACAACCCCACCTG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCTAAGCTGTAGGTCATaGAACCTGTGGCGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLLSCRS*NLWRWG
Trigger: TCCCCAGCGCCACAGGTTCCATGACCTACAGCTTAG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160740.7
ENST00000572681.6
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCGGGAATGCTGGCGATaGCTGCCTTCACTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWRECWR*LPSLSG
Trigger: CCCAGAAAGTGAAGGCAGCCATCGCCAGCATTCCCG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGACCCCACGGGAATGCTaGCGATGGCTGCCTTCACTT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWTPREC*RWLPSL
Trigger: AAGTGAAGGCAGCCATCGCCAGCATTCCCGTGGGGT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTCAAGCTCAGACTCTaGGGCAGTTGGCTCTCGGAC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWLKLRL*GSWLSD
Trigger: GTCCGAGAGCCAACTGCCCCAGAGTCTGAGCTTGAG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTAAGTACAACCCAAGTTaGGAGGGCAGAGGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLKYNPS*EGRGGE
Trigger: CTCACCCCCTCTGCCCTCCCAACTTGGGTTGTACTT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTTCTTGTACTTCTGCTaGGCGGCTGTCAGTGGCGTG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLFLYFC*AAVSGV
Trigger: CACGCCACTGACAGCCGCCCAGCAGAAGTACAAGAA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGCCTTCCATCTCTTTaGTTCGCATGGACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGLPSL*FAWTGG
Trigger: GCCACCTGTCCATGCGAACCAAAGAGATGGAAGGCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTAGAAGGGCGATTGAGTaGAGACGGGTGAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLRRAIE*RRVRRR
Trigger: CCTCCTTCTCACCCGTCTCCACTCAATCGCCCTTCT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCGGACTGCAGTGCGCTaGATGACTGGTGAGGCATTG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWRTAVR*MTGEAL
Trigger: CAATGCCTCACCAGTCATCCAGCGCACTGCAGTCCG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCTAAGCTGTCACTCTTaGGAAAGTCTGGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLLSCHS*ESLGRL
Trigger: GAGCCGCCCCAGACTTTCCCAAGAGTGACAGCTTAG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGAGGGTGTAGGTGTGTaGGACACTGAGTCCACACCA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLEGVGV*DTESTP
Trigger: TGGTGTGGACTCAGTGTCCCACACACCTACACCCTC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCCTCCCCAGGGAATTTaGAGGGCAGTGGCACATCAG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWPPQGI*RAVAHQ
Trigger: CTGATGTGCCACTGCCCTCCAAATTCCCTGGGGAGG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGCTGGTATAGCTGCTaGGCACCAAAACGGGCAACA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGWYSC*APKRAT
Trigger: TGTTGCCCGTTTTGGTGCCCAGCAGCTATACCAGCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCTAAGCTGTAGGTCATaGAACCTGCTGTGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLLSCRS*NLLWRW
Trigger: CCAGCGCCACAGCAGGTTCCATGACCTACAGCTTAG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTGACTGCACATAGGTaGTTCTGGTGGAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWLTAHR*FWWRRA
Trigger: TGCCCTCCTCCACCAGAATCACCTATGTGCAGTCAG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTTCGAAGTCCACTTCTaGCAGGACCCTGTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLFEVHF*QDPVVH
Trigger: GTGGACAACAGGGTCCTGTCAGAAGTGGACTTCGAA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTGTACGGTCAAAGGTaGAGATGTCCCCCTCGCACT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWLYGQR*RCPPRT
Trigger: AGTGCGAGGGGGACATCTTCACCTTTGACCGTACAG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGCCACTGCTTGCCGTTaGACTTCTTTCGTATTCCGC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLATACR*TSFVFR
Trigger: GCGGAATACGAAAGAAGTTCAACGGCAAGCAGTGGC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTTCAGTCCTGGCACCTaGTGTGTCATTTGGAGACGC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLFSPGT*CVIWRR
Trigger: GCGTCTCCAAATGACACAGCAGGTGCCAGGACTGAA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGATGAGCTGGGGAATTTaGTGGCCATGGTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWMSWGI*WPWSQG
Trigger: GCCCTGAGACCATGGCCAGCAAATTCCCCAGCTCAT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGCTGTGACTCCTTCATaGAGCCATCTCGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLAVTPS*SHLVST
Trigger: TGTGCTCACGAGATGGCTGCATGAAGGAGTCACAGC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTTGCTCCTCCTTGTTTaGGGGCAGCACCAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWLLLLV*GQHQCL
Trigger: CAGACACTGGTGCTGCCCCCAAACAAGGAGGAGCAA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTAGGATGTACTGTACCTaGGTGATTCCCCCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLRMYCT*VIPPAL
Trigger: CAAGGCTGGGGGAATCACCCAGGTACAGTACATCCT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTAAGCTGTAGGTCATaGAACCTGTGGCGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWLSCRS*NLWRWG
Trigger: TCCCCAGCGCCACAGGTTCCATGACCTACAGCTTAG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160740.7
ENST00000572681.6
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGAAGTACAACCCAAGTTaGGAGGGCAGAGGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWKYNPS*EGRGGE
Trigger: CTCACCCCCTCTGCCCTCCCAACTTGGGTTGTACTT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGATCCACACCAGCGCCTaGCACCCCCTCATAGAAAGT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWIHTSA*HPLIES
Trigger: ACTTTCTATGAGGGGGTGCCAGGCGCTGGTGTGGAT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCACCTGGTGGGGGTGTaGCATCCAAAACTACATCCA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLHLVGV*HPKLHP
Trigger: TGGATGTAGTTTTGGATGCCACACCCCCACCAGGTG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTCTCTTTGGTTCGCATaGACAGGTGGCGTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLSLWFA*TGGVSS
Trigger: ACTGCTCACGCCACCTGTCCATGCGAACCAAAGAGA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGAGAAGGGCGATTGAGTaGAGACGGGTGAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWRRAIE*RRVRRR
Trigger: CCTCCTTCTCACCCGTCTCCACTCAATCGCCCTTCT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTAAGCTGTCACTCTTaGGAAAGTCTGGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWLSCHS*ESLGRL
Trigger: GAGCCGCCCCAGACTTTCCCAAGAGTGACAGCTTAG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGAGGGTGTAGGTGTGTaGGACACTGAGTCCACACCA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWEGVGV*DTESTP
Trigger: TGGTGTGGACTCAGTGTCCCACACACCTACACCCTC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGCTGGTATAGCTGCTaGGCACCAAAACGGGCAACA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGWYSC*APKRAT
Trigger: TGTTGCCCGTTTTGGTGCCCAGCAGCTATACCAGCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTAAGCTGTAGGTCATaGAACCTGCTGTGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWLSCRS*NLLWRW
Trigger: CCAGCGCCACAGCAGGTTCCATGACCTACAGCTTAG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGAACGGATCACAGGTaGAAACACCTTCCGACCAAA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGTDHR*KHLPTK
Trigger: TTTGGTCGGAAGGTGTTTTCACCTGTGATCCGTTCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGAGTAAAATGCTGTTATaGCAGGACCTCCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWSKMLL*QDLRGL
Trigger: CAGCCCCCGGAGGTCCTGTCATAACAGCATTTTACT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTTCGAAGTCCACTTCTaGCAGGACCCTGTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWFEVHF*QDPVVH
Trigger: GTGGACAACAGGGTCCTGTCAGAAGTGGACTTCGAA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGCCACTGCTTGCCGTTaGACTTCTTTCGTATTCCGC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWATACR*TSFVFR
Trigger: GCGGAATACGAAAGAAGTTCAACGGCAAGCAGTGGC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTTCGAAGTCCACTTCTaGCAGGACCTTGTCCACAGA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLFEVHF*QDLVHR
Trigger: TCTGTGGACAAGGTCCTGTCAGAAGTGGACTTCGAA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572681.6
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGATCAATGTCAGTGGTaGCGAAGCCATCGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLDQCQW*RSHRQQ
Trigger: TTGCTGACGATGGCTTCGGCACCACTGACATTGATC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTAGGTGGGTGCAGGGCTaGCAGAGTAAAATGCTGTTA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLRWVQG*QSKMLL
Trigger: TAACAGCATTTTACTCTGGCAGCCCTGCACCCACCT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTAGTTCTTCCTCTTCTTaGGGTAAGAGCCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLSSSSS*GKSPGW
Trigger: CCATCCTGGGCTCTTACCGCAAGAAGAGGAAGAACT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTGCCCATTTCAGTCCTaGCACCTGCTGTGTCATTTG +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLCPFQS*HLLCHL
Trigger: CAAATGACACAGCAGGTGCCAGGACTGAAATGGGCA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGAGGATGTACTGTACCTaGGTGATTCCCCCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWRMYCT*VIPPAL
Trigger: CAAGGCTGGGGGAATCACCCAGGTACAGTACATCCT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCTGAATCCAGGTCCGTaGAGTTCTTCCTCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLLNPGP*SSSSSC
Trigger: GCAAGAAGAGGAAGAACTCCACGGACCTGGATTCAG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCATTCCGCCCCAAACTaGAGAGGACGAAATGGCTTT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLHSAPN*RGRNGF
Trigger: AAAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCACCTGGTGGGGGTGTaGCATCCAAAACTACATCCA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWHLVGV*HPKLHP
Trigger: TGGATGTAGTTTTGGATGCCACACCCCCACCAGGTG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTCTTTCGTATTCCGCTaGGTGTGCAGACCACATCGC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWSFVFR*VCRPHR
Trigger: GCGATGTGGTCTGCACACCCAGCGGAATACGAAAGA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGTTGGTCTGGAAGGTaGGTAGGATTCCAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGWSGR*VGFQRS
Trigger: ACTCCTCTGGAATCCTACCCACCTTCCAGACCAACC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTAAGGTCAGGTTGGTCTaGAAGGTGGGTAGGATTCCA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLKVRLV*KVGRIP
Trigger: TGGAATCCTACCCACCTTCCAGACCAACCTGACCTT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR TCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGAACGGATCACAGGTaGAAACACCTTCCGACCAAA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGTDHR*KHLPTK
Trigger: TTTGGTCGGAAGGTGTTTTCACCTGTGATCCGTTCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTCTTTCGGTCCTTGTTaGACCACTTCCAATCTGGGT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLSFGPC*TTSNLG
Trigger: ACCCAGATTGGAAGTGGTGCAACAAGGACCGAAAGA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGATCAATGTCAGTGGTaGCGAAGCCATCGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWDQCQW*RSHRQQ
Trigger: TTGCTGACGATGGCTTCGGCACCACTGACATTGATC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGAGGTGGGTGCAGGGCTaGCAGAGTAAAATGCTGTTA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWRWVQG*QSKMLL
Trigger: TAACAGCATTTTACTCTGGCAGCCCTGCACCCACCT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGAGTTCTTCCTCTTCTTaGGGTAAGAGCCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWSSSSS*GKSPGW
Trigger: CCATCCTGGGCTCTTACCGCAAGAAGAGGAAGAACT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTCACGGATCTTCAACTaGAGACAAACCTTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLSRIFN*RQTLEG
Trigger: TCCCTCCAAGGTTTGTCTGCAGTTGAAGATCCGTGA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGACCTGAAAGGCCAGTaGATGCCTTCTTCATTGGCT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWDLKGQ*MPSSLA
Trigger: AGCCAATGAAGAAGGCATGCACTGGCCTTTCAGGTC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTGCCCATTTCAGTCCTaGCACCTGCTGTGTCATTTG +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWCPFQS*HLLCHL
Trigger: CAAATGACACAGCAGGTGCCAGGACTGAAATGGGCA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTGAATCCAGGTCCGTaGAGTTCTTCCTCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWLNPGP*SSSSSC
Trigger: GCAAGAAGAGGAAGAACTCCACGGACCTGGATTCAG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCATTCCGCCCCAAACTaGAGAGGACGAAATGGCTTT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWHSAPN*RGRNGF
Trigger: AAAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGAAGGTCAGGTTGGTCTaGAAGGTGGGTAGGATTCCA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWKVRLV*KVGRIP
Trigger: TGGAATCCTACCCACCTTCCAGACCAACCTGACCTT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTCTTTCGGTCCTTGTTaGACCACTTCCAATCTGGGT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWSFGPC*TTSNLG
Trigger: ACCCAGATTGGAAGTGGTGCAACAAGGACCGAAAGA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR GCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTCACGGATCTTCAACTaGAGACAAACCTTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWSRIFN*RQTLEG
Trigger: TCCCTCCAAGGTTTGTCTGCAGTTGAAGATCCGTGA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTACTGCAGACAAACCTTaGAGGGAAAGATGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLTADKP*RERCLH
Trigger: ATGCAGACATCTTTCCCTCCAAGGTTTGTCTGCAGT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGACTGCAGACAAACCTTaGAGGGAAAGATGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: YLQEEQASFRPKLERTKWTADKP*RERCLH
Trigger: ATGCAGACATCTTTCCCTCCAAGGTTTGTCTGCAGT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR CCA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGCATGCCTTCTTCATTaGCTTCATTTTTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: LQEEQASFRPKLERTKWLACLLH*LHFCPP
Trigger: AGGTGGACAAAAATGAAGCCAATGAAGAAGGCATGC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681038.1
CDS GCA 90 bp CGACGTCTCATCACCCCAGTCAAACTCCGTGCTGCCCTCACGGGCTaGCACGGCCGCGGGCCGGCCCGCCCCGCCAGGCCCACTGTCTGC +
Preference number: 5 (lower is better)
Translates to: RRLITPVKLRAALTG*HGRGPARPARPTVC
Trigger: GCAGACAGTGGGCCTGGCGGGGCGGGCCGGCCCGCGGCCGTGGCAGCCCGTGAGGGCAGCACGGAGTTTGACTGGGGTGATGAGACGTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CCA 90 bp CTCAGGGCCCTTGGCGCTGGTCCGCTCCTCAGCAGGTGGGGGCAGTaGGGGGCTGCTCCGGGCCGTGGGAGTCCAGGTCTCTGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: LRALGAGPLLSRWGQ*GAAPGRGSPGLWQG
Trigger: CCCCTGCCAGAGACCTGGACTCCCACGGCCCGGAGCAGCCCCCCACTGCCCCCACCTGCTGAGGAGCGGACCAGCGCCAAGGGCCCTGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS TCA 90 bp CGGGCATCGGCTGGGCCACGGCAGTTGGTGCAGCTGGAGGCACGGTaGTGGGCACGGGGGCTGGCAGAGGTGGGGGCAGGCCAGGCTTCC +
Preference number: 5 (lower is better)
Translates to: RASAGPRQLVQLEAR*WARGLAEVGAGQAS
Trigger: GGAAGCCTGGCCTGCCCCCACCTCTGCCAGCCCCCGTGCCCATCACCGTGCCTCCAGCTGCACCAACTGCCGTGGCCCAGCCGATGCCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS GCA 90 bp CTTCTGCTGGGCGGCTGTCAGTGGCGTGCGGGCCCGGGCTGCCGGTaGTGTCCCCTTTTCCAGGGAGGCCACGCTGCTGCTGCGGCTGCC +
Preference number: 5 (lower is better)
Translates to: LLLGGCQWRAGPGCR*CPLFQGGHAAAAAA
Trigger: GGCAGCCGCAGCAGCAGCGTGGCCTCCCTGGAAAAGGGGACAGCACCGGCAGCCCGGGCCCGCACGCCACTGACAGCCGCCCAGCAGAAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS GCA 90 bp GGCAGTTGGCTCTCGGACTGGGCCAGGCTCCAGAGGCTGCCGGGGTaGAGGGCCAGGCCGCCCAGAGGCACCTGCCTCAAAGGACCCCAC +
Preference number: 5 (lower is better)
Translates to: GSWLSDWARLQRLPG*RARPPRGTCLKGPH
Trigger: GTGGGGTCCTTTGAGGCAGGTGCCTCTGGGCGGCCTGGCCCTGCACCCCGGCAGCCTCTGGAGCCTGGCCCAGTCCGAGAGCCAACTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS CCA 90 bp CAGGCCAAAGGCGGGCATCGGCTGGGCCACGGCAGTTGGTGCAGCTaGAGGCACGGTGATGGGCACGGGGGCTGGCAGAGGTGGGGGCAG +
Preference number: 5 (lower is better)
Translates to: QAKGGHRLGHGSWCS*RHGDGHGGWQRWGQ
Trigger: CTGCCCCCACCTCTGCCAGCCCCCGTGCCCATCACCGTGCCTCCAGCTGCACCAACTGCCGTGGCCCAGCCGATGCCCGCCTTTGGCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS GCA 90 bp GCACCCGCTGGGACCGCAGCTGCCGCAGGTCATAGCTGCCACTGGTaGTGCCAGGGGGCCAAGGGCCTGGACCACAAGCCTCAGCCGGCT +
Preference number: 5 (lower is better)
Translates to: APAGTAAAAGHSCHW*CQGAKGLDHKPQPA
Trigger: AGCCGGCTGAGGCTTGTGGTCCAGGCCCTTGGCCCCCTGGCAGCACCAGTGGCAGCTATGACCTGCGGCAGCTGCGGTCCCAGCGGGTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS GCA 90 bp AGGTGGCGGTGGGTGGGGGCCCAGGTCTGGTGGCGTCAGCACGCCTaGCTTAGGGGTGCTGGCGCTCAGGTGGCGACTGCGGACTGCAGT +
Preference number: 5 (lower is better)
Translates to: RWRWVGAQVWWRQHA*LRGAGAQVATADCS
Trigger: ACTGCAGTCCGCAGTCGCCACCTGAGCGCCAGCACCCCTAAGGCAGGCGTGCTGACGCCACCAGACCTGGGCCCCCACCCACCGCCACCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS GCA 90 bp CCCGCTGGGACCGCAGCTGCCGCAGGTCATAGCTGCCACTGGTGCTaGCAGGGGGCCAAGGGCCTGGACCACAAGCCTCAGCCGGCTCAT +
Preference number: 5 (lower is better)
Translates to: PAGTAAAAGHSCHWC*QGAKGLDHKPQPAH
Trigger: ATGAGCCGGCTGAGGCTTGTGGTCCAGGCCCTTGGCCCCCTGGCAGCACCAGTGGCAGCTATGACCTGCGGCAGCTGCGGTCCCAGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS GCA 90 bp AGAAGCCAGGCCAAAGGCGGGCATCGGCTGGGCCACGGCAGTTGGTaGAGCTGGAGGCACGGTGATGGGCACGGGGGCTGGCAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: RSQAKGGHRLGHGSW*SWRHGDGHGGWQRW
Trigger: CCACCTCTGCCAGCCCCCGTGCCCATCACCGTGCCTCCAGCTGCACCAACTGCCGTGGCCCAGCCGATGCCCGCCTTTGGCCTGGCTTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CCA 90 bp CGGTCACCAGGGAACTGCACGCCCAGGTCCTGGCTTCGGCGCACCTaGCGCACCACAGCCGGCAGGAAAAGGCCATCACCACGCCGAGCC +
Preference number: 5 (lower is better)
Translates to: RSPGNCTPRSWLRRT*RTTAGRKRPSPRRA
Trigger: GGCTCGGCGTGGTGATGGCCTTTTCCTGCCGGCTGTGGTGCGCCAGGTGCGCCGAAGCCAGGACCTGGGCGTGCAGTTCCCTGGTGACCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CCA 90 bp CCCGGACTGTGGTTGCGGCTGCTGTGCCTCGTCATCCTCCTCCTCTaGCTTGTCACCCTCCCCAGCCCCTCGCCGCCTCAGAGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: PGLWLRLLCLVILLL*LVTLPSPSPPQSLG
Trigger: GCCAAGGCTCTGAGGCGGCGAGGGGCTGGGGAGGGTGACAAGCCAGAGGAGGAGGATGACGAGGCACAGCAGCCGCAACCACAGTCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CCA 90 bp CCGCAGGTCATAGCTGCCACTGGTGCTGCCAGGGGGCCAAGGGCCTaGACCACAAGCCTCAGCCGGCTCATCCTCCAGGTCCGCCGAGTG +
Preference number: 5 (lower is better)
Translates to: PQVIAATGAARGPRA*TTSLSRLILQVRRV
Trigger: CACTCGGCGGACCTGGAGGATGAGCCGGCTGAGGCTTGTGGTCCAGGCCCTTGGCCCCCTGGCAGCACCAGTGGCAGCTATGACCTGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS GCA 90 bp CTGGCGAGAAGGGCGATTGAGTGGAGACGGGTGAGAAGGAGGGCGTaGCTGAGCGCGAGCTGCCCAGCGACACCAGCATCACGGCCGCCT +
Preference number: 5 (lower is better)
Translates to: LARRAIEWRRVRRRA*LSASCPATPASRPP
Trigger: AGGCGGCCGTGATGCTGGTGTCGCTGGGCAGCTCGCGCTCAGGCACGCCCTCCTTCTCACCCGTCTCCACTCAATCGCCCTTCTCGCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CCA 90 bp GCGGGGAGCCCCCAGGCACCCGAGACCCAGTGCCCATTTCAGTCCTaGCACCTGCTGTGTCATTTGGAGACGCCTCAGCCCGGCCAGAGG +
Preference number: 5 (lower is better)
Translates to: AGSPQAPETQCPFQS*HLLCHLETPQPGQR
Trigger: CCTCTGGCCGGGCTGAGGCGTCTCCAAATGACACAGCAGGTGCCAGGACTGAAATGGGCACTGGGTCTCGGGTGCCTGGGGGCTCCCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS CCA 90 bp CAACAGGACCTTCTGAGGCTGAGAGGTGGGTCCAGGGAGTGTGGCTaGGCTCAGGGGCGGCACCAGGCCGCTGGGTGTGCTCACAGGCAC +
Preference number: 5 (lower is better)
Translates to: QQDLLRLRGGSRECG*AQGRHQAAGCAHRH
Trigger: GTGCCTGTGAGCACACCCAGCGGCCTGGTGCCGCCCCTGAGCCCAGCCACACTCCCTGGACCCACCTCTCAGCCTCAGAAGGTCCTGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS CCA 90 bp AGGGCAACAGGACCTTCTGAGGCTGAGAGGTGGGTCCAGGGAGTGTaGCTGGGCTCAGGGGCGGCACCAGGCCGCTGGGTGTGCTCACAG +
Preference number: 5 (lower is better)
Translates to: RATGPSEAERWVQGV*LGSGAAPGRWVCSQ
Trigger: CTGTGAGCACACCCAGCGGCCTGGTGCCGCCCCTGAGCCCAGCCACACTCCCTGGACCCACCTCTCAGCCTCAGAAGGTCCTGTTGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS CCA 90 bp GGCCCGCCCCGCCAGGCCCACTGTCTGCCAGGCCTTCCATCTCTTTaGTTCGCATGGACAGGTGGCGTGAGCAGTAGCCTCGCCGCTGTG +
Preference number: 5 (lower is better)
Translates to: GPPRQAHCLPGLPSL*FAWTGGVSSSLAAV
Trigger: CACAGCGGCGAGGCTACTGCTCACGCCACCTGTCCATGCGAACCAAAGAGATGGAAGGCCTGGCAGACAGTGGGCCTGGCGGGGCGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS GCA 90 bp GCCGGGCTGGGAGGAGTGGGAGGCTCCCCACGATTCTCCAGGCCCTaGCCAGGGACGCGCCAGTCTGAAGATGAGCTGGGGAATTTGCTG +
Preference number: 5 (lower is better)
Translates to: AGLGGVGGSPRFSRP*PGTRQSEDELGNLL
Trigger: CAGCAAATTCCCCAGCTCATCTTCAGACTGGCGCGTCCCTGGGCAGGGCCTGGAGAATCGTGGGGAGCCTCCCACTCCTCCCAGCCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS GCA 90 bp CGTATTCCGCTGGGTGTGCAGACCACATCGCCCTTCTTGTACTTCTaGTGGGCGGCTGTCAGTGGCGTGCGGGCCCGGGCTGCCGGTGCT +
Preference number: 5 (lower is better)
Translates to: RIPLGVQTTSPFLYF*WAAVSGVRARAAGA
Trigger: AGCACCGGCAGCCCGGGCCCGCACGCCACTGACAGCCGCCCAGCAGAAGTACAAGAAGGGCGATGTGGTCTGCACACCCAGCGGAATACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CCA 90 bp AAGAGCCCAGGATGGCCCGGGGTGAGGTGGCCAGAGACTGCAGGGTaGGGGAGGGCAGCACCTCCTCAGGCCGAAACTCAGGCAACTCAG +
Preference number: 5 (lower is better)
Translates to: KSPGWPGVRWPETAG*GRAAPPQAETQATQ
Trigger: CTGAGTTGCCTGAGTTTCGGCCTGAGGAGGTGCTGCCCTCCCCCACCCTGCAGTCTCTGGCCACCTCACCCCGGGCCATCCTGGGCTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000573349.5
ENST00000575287.1
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
ENST00000684265.1
CDS CCA 90 bp ATTCCGCTGGGTGTGCAGACCACATCGCCCTTCTTGTACTTCTGCTaGGCGGCTGTCAGTGGCGTGCGGGCCCGGGCTGCCGGTGCTGTC +
Preference number: 5 (lower is better)
Translates to: IPLGVQTTSPFLYFC*AAVSGVRARAAGAV
Trigger: GACAGCACCGGCAGCCCGGGCCCGCACGCCACTGACAGCCGCCCAGCAGAAGTACAAGAAGGGCGATGTGGTCTGCACACCCAGCGGAAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CCA 90 bp GGGCCACCAGGCGTGGCCGTGAGTCTCCACGAGCCGCCACACTGCTaGCCTCACTGTCCCTCGACGTCTCATCACCCCAGTCAAACTCCG +
Preference number: 5 (lower is better)
Translates to: GPPGVAVSLHEPPHC*PHCPSTSHHPSQTP
Trigger: CGGAGTTTGACTGGGGTGATGAGACGTCGAGGGACAGTGAGGCCAGCAGTGTGGCGGCTCGTGGAGACTCACGGCCACGCCTGGTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS GCA 90 bp GCCCCCAGGCACCCGAGACCCAGTGCCCATTTCAGTCCTGGCACCTaGTGTGTCATTTGGAGACGCCTCAGCCCGGCCAGAGGTGGGGAA +
Preference number: 5 (lower is better)
Translates to: APRHPRPSAHFSPGT*CVIWRRLSPARGGE
Trigger: TTCCCCACCTCTGGCCGGGCTGAGGCGTCTCCAAATGACACAGCAGGTGCCAGGACTGAAATGGGCACTGGGTCTCGGGTGCCTGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS GCA 90 bp TGGGGCGGAGGGTACAGACTGCAGGATGGGGATGCCAGGAGTGGGTaGAGTGGCAGCCAGGACTTTGCCGTTGGTGGAAGTGCCCGGTGG +
Preference number: 5 (lower is better)
Translates to: WGGGYRLQDGDARSG*SGSQDFAVGGSARW
Trigger: CCACCGGGCACTTCCACCAACGGCAAAGTCCTGGCTGCCACTGCACCCACTCCTGGCATCCCCATCCTGCAGTCTGTACCCTCCGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS GCA 90 bp CAGGGGCCACCAGGCGTGGCCGTGAGTCTCCACGAGCCGCCACACTaGTGGCCTCACTGTCCCTCGACGTCTCATCACCCCAGTCAAACT +
Preference number: 5 (lower is better)
Translates to: QGPPGVAVSLHEPPH*WPHCPSTSHHPSQT
Trigger: AGTTTGACTGGGGTGATGAGACGTCGAGGGACAGTGAGGCCAGCAGTGTGGCGGCTCGTGGAGACTCACGGCCACGCCTGGTGGCCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CCA 90 bp TCTGGTGGCGTCAGCACGCCTGCCTTAGGGGTGCTGGCGCTCAGGTaGCGACTGCGGACTGCAGTGCGCTGGATGACTGGTGAGGCATTG +
Preference number: 5 (lower is better)
Translates to: SGGVSTPALGVLALR*RLRTAVRWMTGEAL
Trigger: CAATGCCTCACCAGTCATCCAGCGCACTGCAGTCCGCAGTCGCCACCTGAGCGCCAGCACCCCTAAGGCAGGCGTGCTGACGCCACCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS TCA 90 bp CTGGTGAGGTGGCTGCTGCCGACTTCTTGTCCGAATACACTAAGCTaGCACCCAGCGGGGAGCCCCCAGGCACCCGAGACCCAGTGCCCA +
Preference number: 5 (lower is better)
Translates to: LVRWLLPTSCPNTLS*HPAGSPQAPETQCP
Trigger: TGGGCACTGGGTCTCGGGTGCCTGGGGGCTCCCCGCTGGGTGTCAGCTTAGTGTATTCGGACAAGAAGTCGGCAGCAGCCACCTCACCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS GCA 90 bp ATTGAGTGGAGACGGGTGAGAAGGAGGGCGTGCCTGAGCGCGAGCTaGCCAGCGACACCAGCATCACGGCCGCCTCACACTCGTCGAACT +
Preference number: 5 (lower is better)
Translates to: IEWRRVRRRACLSAS*PATPASRPPHTRRT
Trigger: AGTTCGACGAGTGTGAGGCGGCCGTGATGCTGGTGTCGCTGGGCAGCTCGCGCTCAGGCACGCCCTCCTTCTCACCCGTCTCCACTCAAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS GCA 90 bp GGCAGTGGCACATCAGGGTTGCGGACAATAACAGGTGAGTCCCGCTaGACAGCAGGCACCCTGCGCACAGAGGGCCCTGGATCCGAGGTC +
Preference number: 5 (lower is better)
Translates to: GSGTSGLRTITGESR*TAGTLRTEGPGSEV
Trigger: GACCTCGGATCCAGGGCCCTCTGTGCGCAGGGTGCCTGCTGTGCAGCGGGACTCACCTGTTATTGTCCGCAACCCTGATGTGCCACTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS GCA 90 bp GGGCACAGGCAGCATGGCAAGGCTGCAGCAGCGGCAGGGCCTTCCTaGCACCGTCTGAGTGCCCACCCAAGCCCTCACTGCATTCTATTT +
Preference number: 5 (lower is better)
Translates to: GHRQHGKAAAAAGPS*HRLSAHPSPHCILF
Trigger: AAATAGAATGCAGTGAGGGCTTGGGTGGGCACTCAGACGGTGGCAGGAAGGCCCTGCCGCTGCTGCAGCCTTGCCATGCTGCCTGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571033.1
CDS CCA 90 bp CCGAGACCCAGTGCCCATTTCAGTCCTGGCACCTGCTGTGTCATTTaGAGACGCCTCAGCCCGGCCAGAGGTGGGGAAGGGCTTAGAGGC +
Preference number: 5 (lower is better)
Translates to: PRPSAHFSPGTCCVI*RRLSPARGGEGLRG
Trigger: GCCTCTAAGCCCTTCCCCACCTCTGGCCGGGCTGAGGCGTCTCCAAATGACACAGCAGGTGCCAGGACTGAAATGGGCACTGGGTCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS CCA 90 bp GGGCTCCACACAGGTACAGACAGCTGTGCCCACCACCAGGGCACCTaGTGGGGGTGTGGCATCCAAAACTACATCCACACCAGCGCCTGG +
Preference number: 5 (lower is better)
Translates to: GLHTGTDSCAHHQGT*WGCGIQNYIHTSAW
Trigger: CCAGGCGCTGGTGTGGATGTAGTTTTGGATGCCACACCCCCACCAGGTGCCCTGGTGGTGGGCACAGCTGTCTGTACCTGTGTGGAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CCA 90 bp TTAGGGGTGCTGGCGCTCAGGTGGCGACTGCGGACTGCAGTGCGCTaGATGACTGGTGAGGCATTGATGGGGCTAAAGTTGGCAGGGCGG +
Preference number: 5 (lower is better)
Translates to: LGVLALRWRLRTAVR*MTGEALMGLKLAGR
Trigger: CCGCCCTGCCAACTTTAGCCCCATCAATGCCTCACCAGTCATCCAGCGCACTGCAGTCCGCAGTCGCCACCTGAGCGCCAGCACCCCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CCA 90 bp GGGGACACGGCCCGGAAGCCAGCCGGCGTGGAGGGTGTAGGTGTGTaGGACACTGAGTCCACACCAGAGTCTAAGCTGTCACTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: GDTARKPAGVEGVGV*DTESTPESKLSLLG
Trigger: TCCCAAGAGTGACAGCTTAGACTCTGGTGTGGACTCAGTGTCCCACACACCTACACCCTCCACGCCGGCTGGCTTCCGGGCCGTGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS TCA 90 bp GAATTTGGAGGGCAGTGGCACATCAGGGTTGCGGACAATAACAGGTaGGTCCCGCTGCACAGCAGGCACCCTGCGCACAGAGGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: EFGGQWHIRVADNNR*VPLHSRHPAHRGPW
Trigger: CCAGGGCCCTCTGTGCGCAGGGTGCCTGCTGTGCAGCGGGACTCACCTGTTATTGTCCGCAACCCTGATGTGCCACTGCCCTCCAAATTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS GCA 90 bp GCAGGGCCTTCCTGCCACCGTCTGAGTGCCCACCCAAGCCCTCACTaGATTCTATTTCACAGGGGAGTCAGAGAGGGGTCCTGCCCACAG +
Preference number: 5 (lower is better)
Translates to: AGPSCHRLSAHPSPH*ILFHRGVREGSCPQ
Trigger: CTGTGGGCAGGACCCCTCTCTGACTCCCCTGTGAAATAGAATGCAGTGAGGGCTTGGGTGGGCACTCAGACGGTGGCAGGAAGGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571033.1
CDS GCA 90 bp TGGCAAGGCTGCAGCAGCGGCAGGGCCTTCCTGCCACCGTCTGAGTaGCCACCCAAGCCCTCACTGCATTCTATTTCACAGGGGAGTCAG +
Preference number: 5 (lower is better)
Translates to: WQGCSSGRAFLPPSE*PPKPSLHSISQGSQ
Trigger: CTGACTCCCCTGTGAAATAGAATGCAGTGAGGGCTTGGGTGGGCACTCAGACGGTGGCAGGAAGGCCCTGCCGCTGCTGCAGCCTTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571033.1
CDS CCA 90 bp CTCCACACAGGTACAGACAGCTGTGCCCACCACCAGGGCACCTGGTaGGGGTGTGGCATCCAAAACTACATCCACACCAGCGCCTGGCAC +
Preference number: 5 (lower is better)
Translates to: LHTGTDSCAHHQGTW*GCGIQNYIHTSAWH
Trigger: GTGCCAGGCGCTGGTGTGGATGTAGTTTTGGATGCCACACCCCCACCAGGTGCCCTGGTGGTGGGCACAGCTGTCTGTACCTGTGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCGCTCCCGCGTCTCCTaGTGCCCTCCTGCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLRSRVS*CPPASP
Trigger: GGGGCTGGCAGGAGGGCACAAGGAGACGCGGGAGCG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGTACCAGCCGCCTCCTaGCGCTCCGGGGTGTCCCCG +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLVPAAS*RSGVSP
Trigger: CGGGGACACCCCGGAGCGCAAGGAGGCGGCTGGTAC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCGCTCCCGCGTCTCCTaGTGCCCTCCTGCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWRSRVS*CPPASP
Trigger: GGGGCTGGCAGGAGGGCACAAGGAGACGCGGGAGCG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGGGCTGGCGGGCCCTaGGGCAGAATGGTGGCTGCA +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGAGGP*GRMVAA
Trigger: TGCAGCCACCATTCTGCCCAAGGGCCCGCCAGCCCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGTACCAGCCGCCTCCTaGCGCTCCGGGGTGTCCCCG +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWVPAAS*RSGVSP
Trigger: CGGGGACACCCCGGAGCGCAAGGAGGCGGCTGGTAC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGGGCCCGGACTGTGGTaGCGGCTGCTGTGCCTCGTC +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLGPGLW*RLLCLV
Trigger: GACGAGGCACAGCAGCCGCAACCACAGTCCGGGCCC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGCTGGGCCACGGCAGTaGGTGCAGCTGGAGGCACGG +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLAGPRQ*VQLEAR
Trigger: CCGTGCCTCCAGCTGCACCAACTGCCGTGGCCCAGC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS TCA 90 bp GGGGTACCCAGGGCTGGAGGGTGCTTCTCCTCGCCCTCCTCACAGTaGGTACCCAGGTTGCCACCAAAGCTGATCTTAGAGACCTCAGCA +
Preference number: 5 (lower is better)
Translates to: GVPRAGGCFSSPSSQ*VPRLPPKLILETSA
Trigger: TGCTGAGGTCTCTAAGATCAGCTTTGGTGGCAACCTGGGTACTCACTGTGAGGAGGGCGAGGAGAAGCACCCTCCAGCCCTGGGTACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CCA 90 bp CCACGTCCCCTCCCCTCCAACTCTCCGTTCACTATGCACAGGCTGTaGGGTCTCTTACAACTGTGGTGTGGGAGAGGTCCTGCTCCTTGC +
Preference number: 5 (lower is better)
Translates to: PRPLPSNSPFTMHRL*GLLQLWCGRGPAPC
Trigger: GCAAGGAGCAGGACCTCTCCCACACCACAGTTGTAAGAGACCCCACAGCCTGTGCATAGTGAACGGAGAGTTGGAGGGGAGGGGACGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684265.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGCCCAGGGCACCTGGTaGCAGGATGCCCAGGGGTAC +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLAQGTW*QDAQGY
Trigger: GTACCCCTGGGCATCCTGCAACCAGGTGCCCTGGGC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGGGCTGGCGGGCCCTaGGGCAGAATGGTGGCTGCA +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGAGGP*GRMVAA
Trigger: TGCAGCCACCATTCTGCCCAAGGGCCCGCCAGCCCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGGGCCCGGACTGTGGTaGCGGCTGCTGTGCCTCGTC +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWGPGLW*RLLCLV
Trigger: GACGAGGCACAGCAGCCGCAACCACAGTCCGGGCCC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGCCCAGGGCACCTGGTaGCAGGATGCCCAGGGGTAC +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWAQGTW*QDAQGY
Trigger: GTACCCCTGGGCATCCTGCAACCAGGTGCCCTGGGC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGTGATTCCCCCAGCCTaGCCCAGGGCACCTGGTTGC +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLVIPPA*PRAPGC
Trigger: GCAACCAGGTGCCCTGGGCAAGGCTGGGGGAATCAC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGCCAGGACTTTGCCGTaGGTGGAAGTGCCCGGTGGG +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLARTLP*VEVPGG
Trigger: CCCACCGGGCACTTCCACCAACGGCAAAGTCCTGGC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCAGACTCTGGGGCAGTaGGCTCTCGGACTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLQTLGQ*ALGLGQ
Trigger: CTGGCCCAGTCCGAGAGCCAACTGCCCCAGAGTCTG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTATGGTCTCAGGGCCCTaGGCGCTGGTCCGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLMVSGP*ALVRSS
Trigger: TGAGGAGCGGACCAGCGCCAAGGGCCCTGAGACCAT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGCACCACCCTCCAGCTaGCAGCCCTCACAGGAGCCA +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLAPPSS*QPSQEP
Trigger: TGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTGGTGC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGCATCCTCGGGCTGTTaGGGGTCCAGGGCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWASSGC*GSRAAG
Trigger: CCCTGCTGCCCTGGACCCCAAACAGCCCGAGGATGC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS TCA 90 bp GACTGGGATCACGAAGACAGCACTGAAGAGCACTCAAGACTACGATaGCCCTGTCCCTTACCCCTGAAAACCCGCTGGGCCCTCCAACCC +
Preference number: 5 (lower is better)
Translates to: DWDHEDSTEEHSRLR*PCPLPLKTRWALQP
Trigger: GGGTTGGAGGGCCCAGCGGGTTTTCAGGGGTAAGGGACAGGGTCATCGTAGTCTTGAGTGCTCTTCAGTGCTGTCTTCGTGATCCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684265.1
CDS GCA 90 bp TGTGACTCCTTCATGCAGCCATCTCGTGAGCACAGCCGGCGCCACTaGTTGCCGTTGAACTTCTTTCGTATTCCGCTGGGTGTGCAGACC +
Preference number: 5 (lower is better)
Translates to: CDSFMQPSREHSRRH*LPLNFFRIPLGVQT
Trigger: GGTCTGCACACCCAGCGGAATACGAAAGAAGTTCAACGGCAAGCAGTGGCGCCGGCTGTGCTCACGAGATGGCTGCATGAAGGAGTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTACAGGCCGCACCACATaGGTGACCATGGTGGCGGCA +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLTGRTT*VTMVAA
Trigger: TGCCGCCACCATGGTCACCAATGTGGTGCGGCCTGT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCACCTGCTGTGTCATTaGGAGACGCCTCAGCCCGGC +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLHLLCH*ETPQPG
Trigger: GCCGGGCTGAGGCGTCTCCAAATGACACAGCAGGTG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGAGGGGTACTGGCCCATaGGGGCCACTCCCAGCACCT +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWRGTGP*GPLPAP
Trigger: AGGTGCTGGGAGTGGCCCCAATGGGCCAGTACCCCT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGTGATTCCCCCAGCCTaGCCCAGGGCACCTGGTTGC +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWVIPPA*PRAPGC
Trigger: GCAACCAGGTGCCCTGGGCAAGGCTGGGGGAATCAC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGCCAGGACTTTGCCGTaGGTGGAAGTGCCCGGTGGG +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWARTLP*VEVPGG
Trigger: CCCACCGGGCACTTCCACCAACGGCAAAGTCCTGGC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGTGGCAGCCAGGACTTaGCCGTTGGTGGAAGTGCCC +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLVAART*PLVEVP
Trigger: GGGCACTTCCACCAACGGCAAAGTCCTGGCTGCCAC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTGGCTGCAGGTGGGGTaGTGCTGGTGGCCACAGTGT +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLWLQVG*CWWPQC
Trigger: ACACTGTGGCCACCAGCACAACCCCACCTGCAGCCA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCAGACTCTGGGGCAGTaGGCTCTCGGACTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWQTLGQ*ALGLGQ
Trigger: CTGGCCCAGTCCGAGAGCCAACTGCCCCAGAGTCTG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGATGGTCTCAGGGCCCTaGGCGCTGGTCCGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWMVSGP*ALVRSS
Trigger: TGAGGAGCGGACCAGCGCCAAGGGCCCTGAGACCAT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCGCACCTTCACCTTCTaGCCAGTACCAGCCGCCTCC +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLRTFTF*PVPAAS
Trigger: GGAGGCGGCTGGTACTGGCAAGAAGGTGAAGGTGCG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGCACCACCCTCCAGCTaGCAGCCCTCACAGGAGCCA +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWAPPSS*QPSQEP
Trigger: TGGCTCCTGTGAGGGCTGCAAGCTGGAGGGTGGTGC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS GCA 90 bp CCTCCCCAGTGCACAACCCTCCAGGTTCTTAGGTGTCGCGCTCTCTaGAAACTACACCACACACTGCAGCCTGTCACTCTGATCTCAGCT +
Preference number: 5 (lower is better)
Translates to: PPQCTTLQVLRCRAL*KLHHTLQPVTLISA
Trigger: AGCTGAGATCAGAGTGACAGGCTGCAGTGTGTGGTGTAGTTTGCAGAGAGCGCGACACCTAAGAACCTGGAGGGTTGTGCACTGGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684265.1
CDS GCA 90 bp AGGGCACAAGTGCCAGGTGTTTCCTTGAGGATATGCACAGGAAGATaGTTCCTCACCAAGAGGCTGGTCCCAGGGGTCCAACCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: RAQVPGVSLRICTGR*FLTKRLVPGVQPSA
Trigger: GGCTGAAGGTTGGACCCCTGGGACCAGCCTCTTGGTGAGGAAGCATCTTCCTGTGCATATCCTCAAGGAAACACCTGGCACTTGTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684265.1
CDS GCA 90 bp CTCTACCCAGAGAGGGCACAAGTGCCAGGTGTTTCCTTGAGGATATaGACAGGAAGATGCTTCCTCACCAAGAGGCTGGTCCCAGGGGTC +
Preference number: 5 (lower is better)
Translates to: LYPERAQVPGVSLRI*TGRCFLTKRLVPGV
Trigger: GACCCCTGGGACCAGCCTCTTGGTGAGGAAGCATCTTCCTGTGCATATCCTCAAGGAAACACCTGGCACTTGTGCCCTCTCTGGGTAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684265.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCAATCTGGGTGGGCCTaGAAGTGGGCCTCCTTCACC +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLQSGWA*KWASFT
Trigger: GGTGAAGGAGGCCCACTTCAAGGCCCACCCAGATTG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGAGGAACCGGGTTGCCTaGGAAGGTGTCGCTGGACCC +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWRNRVA*EGVAGP
Trigger: GGGTCCAGCGACACCTTCCAAGGCAACCCGGTTCCT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCCCTCTTGCTCCTCCTaGTTTGGGGGCAGCACCAGT +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLPSCSS*FGGSTS
Trigger: ACTGGTGCTGCCCCCAAACAAGGAGGAGCAAGAGGG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGACAGGCCGCACCACATaGGTGACCATGGTGGCGGCA +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWTGRTT*VTMVAA
Trigger: TGCCGCCACCATGGTCACCAATGTGGTGCGGCCTGT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCACCTGCTGTGTCATTaGGAGACGCCTCAGCCCGGC +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWHLLCH*ETPQPG
Trigger: GCCGGGCTGAGGCGTCTCCAAATGACACAGCAGGTG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGTGGCAGCCAGGACTTaGCCGTTGGTGGAAGTGCCC +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWVAART*PLVEVP
Trigger: GGGCACTTCCACCAACGGCAAAGTCCTGGCTGCCAC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTGGCTGCAGGTGGGGTaGTGCTGGTGGCCACAGTGT +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWWLQVG*CWWPQC
Trigger: ACACTGTGGCCACCAGCACAACCCCACCTGCAGCCA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCGCACCTTCACCTTCTaGCCAGTACCAGCCGCCTCC +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWRTFTF*PVPAAS
Trigger: GGAGGCGGCTGGTACTGGCAAGAAGGTGAAGGTGCG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTTGAACGTGGCTGTCTaGCGGCTGAGTGAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLLNVAV*RLSEGS
Trigger: GGAGCCCTCACTCAGCCGCAAGACAGCCACGTTCAA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTTGGGCGCTCGAGACTaGAACGTGGCTGTCTTGCGG +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLLGARD*NVAVLR
Trigger: CCGCAAGACAGCCACGTTCAAGTCTCGAGCGCCCAA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCAATCTGGGTGGGCCTaGAAGTGGGCCTCCTTCACC +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWQSGWA*KWASFT
Trigger: GGTGAAGGAGGCCCACTTCAAGGCCCACCCAGATTG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCTTGCTCCTCCTTGTTaGGGGGCAGCACCAGTGTCT +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLLAPPC*GAAPVS
Trigger: AGACACTGGTGCTGCCCCCAAACAAGGAGGAGCAAG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCCCTCTTGCTCCTCCTaGTTTGGGGGCAGCACCAGT +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWPSCSS*FGGSTS
Trigger: ACTGGTGCTGCCCCCAAACAAGGAGGAGCAAGAGGG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGATGAGCTGGGGAATTaGCTGGCCATGGTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLDELGN*LAMVSG
Trigger: CCCTGAGACCATGGCCAGCAAATTCCCCAGCTCATC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTTGAACGTGGCTGTCTaGCGGCTGAGTGAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWLNVAV*RLSEGS
Trigger: GGAGCCCTCACTCAGCCGCAAGACAGCCACGTTCAA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTACAAAGGCTGGAGACTaGGGTGGTGGTGACAGGAGC +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLTKAGD*GGGDRS
Trigger: GCTCCTGTCACCACCACCCAAGTCTCCAGCCTTTGT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTTGATGGGGCTAAAGTaGGCAGGGCGGAAGCCGAAG +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLLMGLK*AGRKPK
Trigger: CTTCGGCTTCCGCCCTGCCAACTTTAGCCCCATCAA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTACGGTGAAGGTCAGGTaGGTCTGGAAGGTGGGTAGG +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLTVKVR*VWKVGR
Trigger: CCTACCCACCTTCCAGACCAACCTGACCTTCACCGT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTACCTCCCCAGGGAATTaGGAGGGCAGTGGCACATCA +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLTSPGN*EGSGTS
Trigger: TGATGTGCCACTGCCCTCCAAATTCCCTGGGGAGGT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGCTCCTCCTTGTTaGGGGGCAGCACCAGTGTCT +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWLAPPC*GAAPVS
Trigger: AGACACTGGTGCTGCCCCCAAACAAGGAGGAGCAAG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGATGAGCTGGGGAATTaGCTGGCCATGGTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWDELGN*LAMVSG
Trigger: CCCTGAGACCATGGCCAGCAAATTCCCCAGCTCATC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGACAAAGGCTGGAGACTaGGGTGGTGGTGACAGGAGC +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWTKAGD*GGGDRS
Trigger: GCTCCTGTCACCACCACCCAAGTCTCCAGCCTTTGT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGACCACATCGCCCTTCTaGTACTTCTGCTGGGCGGCT +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWTTSPF*YFCWAA
Trigger: AGCCGCCCAGCAGAAGTACAAGAAGGGCGATGTGGT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGAGCCGGCGCCACTGCTaGCCGTTGAACTTCTTTCGT +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWSRRHC*PLNFFR
Trigger: ACGAAAGAAGTTCAACGGCAAGCAGTGGCGCCGGCT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTAGGCCTTCCATCTCTTaGGTTCGCATGGACAGGTGG +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLRPSIS*VRMDRW
Trigger: CCACCTGTCCATGCGAACCAAAGAGATGGAAGGCCT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTTGATGGGGCTAAAGTaGGCAGGGCGGAAGCCGAAG +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWLMGLK*AGRKPK
Trigger: CTTCGGCTTCCGCCCTGCCAACTTTAGCCCCATCAA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGACGGTGAAGGTCAGGTaGGTCTGGAAGGTGGGTAGG +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWTVKVR*VWKVGR
Trigger: CCTACCCACCTTCCAGACCAACCTGACCTTCACCGT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGACCTCCCCAGGGAATTaGGAGGGCAGTGGCACATCA +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWTSPGN*EGSGTS
Trigger: TGATGTGCCACTGCCCTCCAAATTCCCTGGGGAGGT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS GCA 90 bp AGCCAGTTACTCTGCACCCCTCACCTTTCTATTACAGCGGACCTGTaGCATCCCATCACTTTAACATCACAGCTGTCCCCAGATACGCCC +
Preference number: 5 (lower is better)
Translates to: SQLLCTPHLSITADL*HPITLTSQLSPDTP
Trigger: GGGCGTATCTGGGGACAGCTGTGATGTTAAAGTGATGGGATGGCACAGGTCCGCTGTAATAGAAAGGTGAGGGGTGCAGAGTAACTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684265.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGCTGCTGCCGACTTCTaGTCCGAATACACTAAGCTG +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLAAADF*SEYTKL
Trigger: CAGCTTAGTGTATTCGGACAAGAAGTCGGCAGCAGC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTCTGACAGGACCCTGTaGTCCACAGAGTCAAAGGTC +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLSDRTL*STESKV
Trigger: GACCTTTGACTCTGTGGACAACAGGGTCCTGTCAGA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGAGGAGTATGGCACCTaGTCATACTCTAGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLEEYGT*SYSSSP
Trigger: TGGGGAGCTAGAGTATGACAAGGTGCCATACTCCTC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTCGCCACTGCTTGCCGTaGAACTTCTTTCGTATTCCG +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLRHCLP*NFFRIP
Trigger: CGGAATACGAAAGAAGTTCAACGGCAAGCAGTGGCG...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGAGGCCTTCCATCTCTTaGGTTCGCATGGACAGGTGG +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWRPSIS*VRMDRW
Trigger: CCACCTGTCCATGCGAACCAAAGAGATGGAAGGCCT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTCTAAGCTGTCACTCTaGGGAAAGTCTGGGGCGGCT +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWSKLSL*GKSGAA
Trigger: AGCCGCCCCAGACTTTCCCAAGAGTGACAGCTTAGA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTAGTGGCACATCAGGGTaGCGGACAATAACAGGTGAG +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLSGTSG*RTITGE
Trigger: CTCACCTGTTATTGTCCGCAACCCTGATGTGCCACT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTTCTTTCGGTCCTTGTaGCACCACTTCCAATCTGGG +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLFFRSL*HHFQSG
Trigger: CCCAGATTGGAAGTGGTGCAACAAGGACCGAAAGAA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGCTGCTGCCGACTTCTaGTCCGAATACACTAAGCTG +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWAAADF*SEYTKL
Trigger: CAGCTTAGTGTATTCGGACAAGAAGTCGGCAGCAGC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGGAGGAGTATGGCACCTaGTCATACTCTAGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWEEYGT*SYSSSP
Trigger: TGGGGAGCTAGAGTATGACAAGGTGCCATACTCCTC...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTCCACATACTTCTTCTaGGGCGCTCGAGACTTGAAC +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLSTYFF*GARDLN
Trigger: GTTCAAGTCTCGAGCGCCCAAGAAGAAGTATGTGGA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCGCCACTGCTTGCCGTaGAACTTCTTTCGTATTCCG +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWRHCLP*NFFRIP
Trigger: CGGAATACGAAAGAAGTTCAACGGCAAGCAGTGGCG...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTATGACTGGTGAGGCATaGATGGGGCTAAAGTTGGCA +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLMTGEA*MGLKLA
Trigger: TGCCAACTTTAGCCCCATCAATGCCTCACCAGTCAT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGAGTGGCACATCAGGGTaGCGGACAATAACAGGTGAG +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWSGTSG*RTITGE
Trigger: CTCACCTGTTATTGTCCGCAACCCTGATGTGCCACT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTCATTGGCTTCATTTTaGTCCACCTTGGGCTCGGCG +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWSLASF*STLGSA
Trigger: CGCCGAGCCCAAGGTGGACAAAAATGAAGCCAATGA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTTCTTTCGGTCCTTGTaGCACCACTTCCAATCTGGG +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWFFRSL*HHFQSG
Trigger: CCCAGATTGGAAGTGGTGCAACAAGGACCGAAAGAA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTGACTTCTTTCGGTCCTaGTTGCACCACTTCCAATCT +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLDFFRS*LHHFQS
Trigger: AGATTGGAAGTGGTGCAACAAGGACCGAAAGAAGTC...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTAACTGCAGACAAACCTaGGAGGGAAAGATGTCTGCA +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLNCRQT*EGKMSA
Trigger: TGCAGACATCTTTCCCTCCAAGGTTTGTCTGCAGTT...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTCATTGGCTTCATTTTaGTCCACCCGTATTCCTGGC +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLSLASF*STRIPG
Trigger: GCCAGGAATACGGGTGGACAAAAATGAAGCCAATGA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572681.6
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGTCCACATACTTCTTCTaGGGCGCTCGAGACTTGAAC +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWSTYFF*GARDLN
Trigger: GTTCAAGTCTCGAGCGCCCAAGAAGAAGTATGTGGA...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGACTTCTGACAGGACCTaGTCCACAGAGTCAAAGGTC +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWTSDRT*STESKV
Trigger: GACCTTTGACTCTGTGGACAAGGTCCTGTCAGAAGT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572681.6
CDS-3UTR CAA 90 bp TATTTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGAACTGCAGACAAACCTaGGAGGGAAAGATGTCTGCA +
Preference number: 5 (lower is better)
Translates to: YLQEEQASFRPKLERTKWNCRQT*EGKMSA
Trigger: TGCAGACATCTTTCCCTCCAAGGTTTGTCTGCAGTT...CCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS-3UTR CAA 90 bp TTACAAGAGGAGCAGGCCTCATTCCGCCCCAAACTGGAGAGGACGAAATGGCTTTGCATGCCTTCTTCATaGGCTTCATTTTTGTCCACC +
Preference number: 5 (lower is better)
Translates to: LQEEQASFRPKLERTKWLCMPSS*ASFLST
Trigger: GGTGGACAAAAATGAAGCCAATGAAGAAGGCATGCA...AAGCCATTTCGTCCTCTCCAGTTTGGGGCGGAATGAGGCCTGCTCCTCTTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS GCA 72 bp CCCGGGCGGGCAGACGGACCAGCGTGCGTGCGTCCGTaGGCTCCGAGCGAGCCCCGCGCCGAACCACCACCG +
Preference number: 6 (lower is better)
Translates to: PGRADGPACVRP*APSEPRAEPPP
Trigger: CGGTGGTGGTTCGGCGCGGGGCTCGCTCGGAGCGCACGGACGCACGCACGCTGGTCCGTCTGCCCGCCCGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000160740.7
CDS GCA 72 bp ATCACCCCAGTCAAACTCCGTGCTGCCCTCACGGGCTaGCACGGCCGCGGGCCGGCCCGCCCCGCCAGGCCC +
Preference number: 6 (lower is better)
Translates to: ITPVKLRAALTG*HGRGPARPARP
Trigger: GGGCCTGGCGGGGCGGGCCGGCCCGCGGCCGTGGCAGCCCGTGAGGGCAGCACGGAGTTTGACTGGGGTGAT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS GCA 72 bp GGCGGCTGTCAGTGGCGTGCGGGCCCGGGCTGCCGGTaGTGTCCCCTTTTCCAGGGAGGCCACGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: GGCQWRAGPGCR*CPLFQGGHAAA
Trigger: AGCAGCAGCGTGGCCTCCCTGGAAAAGGGGACAGCACCGGCAGCCCGGGCCCGCACGCCACTGACAGCCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS GCA 72 bp CCCTCGACGTCTCATCACCCCAGTCAAACTCCGTGCTaGCCTCACGGGCTGCCACGGCCGCGGGCCGGCCCG +
Preference number: 6 (lower is better)
Translates to: PSTSHHPSQTPC*PHGLPRPRAGP
Trigger: CGGGCCGGCCCGCGGCCGTGGCAGCCCGTGAGGGCAGCACGGAGTTTGACTGGGGTGATGAGACGTCGAGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CCA 72 bp CTTGGCGCTGGTCCGCTCCTCAGCAGGTGGGGGCAGTaGGGGGCTGCTCCGGGCCGTGGGAGTCCAGGTCTC +
Preference number: 6 (lower is better)
Translates to: LGAGPLLSRWGQ*GAAPGRGSPGL
Trigger: GAGACCTGGACTCCCACGGCCCGGAGCAGCCCCCCACTGCCCCCACCTGCTGAGGAGCGGACCAGCGCCAAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS TCA 72 bp TGCACAGGCAGGCGGCAGCTGGGGACTGGGCACAGGTaGCACGCCCACCTGACCGGGAGCCAGCAGTGGGGC +
Preference number: 6 (lower is better)
Translates to: CTGRRQLGTGHR*HAHLTGSQQWG
Trigger: GCCCCACTGCTGGCTCCCGGTCAGGTGGGCGTGTCACCTGTGCCCAGTCCCCAGCTGCCGCCTGCCTGTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS GCA 72 bp CTCTCGGACTGGGCCAGGCTCCAGAGGCTGCCGGGGTaGAGGGCCAGGCCGCCCAGAGGCACCTGCCTCAAA +
Preference number: 6 (lower is better)
Translates to: LSDWARLQRLPG*RARPPRGTCLK
Trigger: TTTGAGGCAGGTGCCTCTGGGCGGCCTGGCCCTGCACCCCGGCAGCCTCTGGAGCCTGGCCCAGTCCGAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS GCA 72 bp TGGGTGGGGGCCCAGGTCTGGTGGCGTCAGCACGCCTaGCTTAGGGGTGCTGGCGCTCAGGTGGCGACTGCG +
Preference number: 6 (lower is better)
Translates to: WVGAQVWWRQHA*LRGAGAQVATA
Trigger: CGCAGTCGCCACCTGAGCGCCAGCACCCCTAAGGCAGGCGTGCTGACGCCACCAGACCTGGGCCCCCACCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS GCA 72 bp GCCAAAGGCGGGCATCGGCTGGGCCACGGCAGTTGGTaGAGCTGGAGGCACGGTGATGGGCACGGGGGCTGG +
Preference number: 6 (lower is better)
Translates to: AKGGHRLGHGSW*SWRHGDGHGGW
Trigger: CCAGCCCCCGTGCCCATCACCGTGCCTCCAGCTGCACCAACTGCCGTGGCCCAGCCGATGCCCGCCTTTGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CCA 72 bp AGGGCTCGGTCACCAGGGAACTGCACGCCCAGGTCCTaGCTTCGGCGCACCTGGCGCACCACAGCCGGCAGG +
Preference number: 6 (lower is better)
Translates to: RARSPGNCTPRS*LRRTWRTTAGR
Trigger: CCTGCCGGCTGTGGTGCGCCAGGTGCGCCGAAGCCAGGACCTGGGCGTGCAGTTCCCTGGTGACCGAGCCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CCA 72 bp CAGGCCAAAGGCGGGCATCGGCTGGGCCACGGCAGTTaGTGCAGCTGGAGGCACGGTGATGGGCACGGGGGC +
Preference number: 6 (lower is better)
Translates to: QAKGGHRLGHGS*CSWRHGDGHGG
Trigger: GCCCCCGTGCCCATCACCGTGCCTCCAGCTGCACCAACTGCCGTGGCCCAGCCGATGCCCGCCTTTGGCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS GCA 72 bp TGTCCCTCGACGTCTCATCACCCCAGTCAAACTCCGTaGTGCCCTCACGGGCTGCCACGGCCGCGGGCCGGC +
Preference number: 6 (lower is better)
Translates to: CPSTSHHPSQTP*CPHGLPRPRAG
Trigger: GCCGGCCCGCGGCCGTGGCAGCCCGTGAGGGCAGCACGGAGTTTGACTGGGGTGATGAGACGTCGAGGGACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CCA 72 bp CCCACGGGAATGCTGGCGATGGCTGCCTTCACTTTCTaGGGGGCCTTCGGGCTGGGCCGCTGGGCCTTGGGG +
Preference number: 6 (lower is better)
Translates to: PTGMLAMAAFTF*GAFGLGRWALG
Trigger: CCCCAAGGCCCAGCGGCCCAGCCCGAAGGCCCCCCAGAAAGTGAAGGCAGCCATCGCCAGCATTCCCGTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS GCA 72 bp GGGACCGCAGCTGCCGCAGGTCATAGCTGCCACTGGTaGTGCCAGGGGGCCAAGGGCCTGGACCACAAGCCT +
Preference number: 6 (lower is better)
Translates to: GTAAAAGHSCHW*CQGAKGLDHKP
Trigger: AGGCTTGTGGTCCAGGCCCTTGGCCCCCTGGCAGCACCAGTGGCAGCTATGACCTGCGGCAGCTGCGGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS GCA 72 bp GGAGGAGTGGGAGGCTCCCCACGATTCTCCAGGCCCTaGCCAGGGACGCGCCAGTCTGAAGATGAGCTGGGG +
Preference number: 6 (lower is better)
Translates to: GGVGGSPRFSRP*PGTRQSEDELG
Trigger: CCCCAGCTCATCTTCAGACTGGCGCGTCCCTGGGCAGGGCCTGGAGAATCGTGGGGAGCCTCCCACTCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS GCA 72 bp AGACGGGTGAGAAGGAGGGCGTGCCTGAGCGCGAGCTaGCCAGCGACACCAGCATCACGGCCGCCTCACACT +
Preference number: 6 (lower is better)
Translates to: RRVRRRACLSAS*PATPASRPPHT
Trigger: AGTGTGAGGCGGCCGTGATGCTGGTGTCGCTGGGCAGCTCGCGCTCAGGCACGCCCTCCTTCTCACCCGTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CCA 72 bp TGTGGGCTGCCCCTCAAGCTCAGACTCTGGGGCAGTTaGCTCTCGGACTGGGCCAGGCTCCAGAGGCTGCCG +
Preference number: 6 (lower is better)
Translates to: CGLPLKLRLWGS*LSDWARLQRLP
Trigger: CGGCAGCCTCTGGAGCCTGGCCCAGTCCGAGAGCCAACTGCCCCAGAGTCTGAGCTTGAGGGGCAGCCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS CCA 72 bp GGCTGGTGGTGTGGGCTGCCCCTCAAGCTCAGACTCTaGGGCAGTTGGCTCTCGGACTGGGCCAGGCTCCAG +
Preference number: 6 (lower is better)
Translates to: GWWCGLPLKLRL*GSWLSDWARLQ
Trigger: CTGGAGCCTGGCCCAGTCCGAGAGCCAACTGCCCCAGAGTCTGAGCTTGAGGGGCAGCCCACACCACCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS CCA 72 bp GGGAACTGCACGCCCAGGTCCTGGCTTCGGCGCACCTaGCGCACCACAGCCGGCAGGAAAAGGCCATCACCA +
Preference number: 6 (lower is better)
Translates to: GNCTPRSWLRRT*RTTAGRKRPSP
Trigger: TGGTGATGGCCTTTTCCTGCCGGCTGTGGTGCGCCAGGTGCGCCGAAGCCAGGACCTGGGCGTGCAGTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CCA 72 bp GGTGTGCAGACCACATCGCCCTTCTTGTACTTCTGCTaGGCGGCTGTCAGTGGCGTGCGGGCCCGGGCTGCC +
Preference number: 6 (lower is better)
Translates to: GVQTTSPFLYFC*AAVSGVRARAA
Trigger: GGCAGCCCGGGCCCGCACGCCACTGACAGCCGCCCAGCAGAAGTACAAGAAGGGCGATGTGGTCTGCACACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CAA 72 bp GTGTGGGCTGCCCCTCAAGCTCAGACTCTGGGGCAGTaGGCTCTCGGACTGGGCCAGGCTCCAGAGGCTGCC +
Preference number: 6 (lower is better)
Translates to: VWAAPQAQTLGQ*ALGLGQAPEAA
Trigger: GGCAGCCTCTGGAGCCTGGCCCAGTCCGAGAGCCAACTGCCCCAGAGTCTGAGCTTGAGGGGCAGCCCACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS CAA 90 bp GGGCGGAGGGCACTCTGGCTCCGCCGCCCTCTTGCTCCTCCTTGTTaGGGGGCAGCACCAGTGTCTGCAGGATGTTTCCTCCTCCGCTGG +
Preference number: 6 (lower is better)
Translates to: GRRALWLRRPLAPPC*GAAPVSAGCFLLRW
Trigger: CCAGCGGAGGAGGAAACATCCTGCAGACACTGGTGCTGCCCCCAAACAAGGAGGAGCAAGAGGGCGGCGGAGCCAGAGTGCCCTCCGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS TCA 72 bp AGGGCTGGTACCCAGGGGCAGCGCGTGCCCGCCCGCTaGCTGCACATAGGTGATTCTGGTGGAGGAGGGCAA +
Preference number: 6 (lower is better)
Translates to: RAGTQGQRVPAR*LHIGDSGGGGQ
Trigger: TTGCCCTCCTCCACCAGAATCACCTATGTGCAGTCAGCGGGCGGGCACGCGCTGCCCCTGGGTACCAGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS GCA 72 bp CTGGGTGTGCAGACCACATCGCCCTTCTTGTACTTCTaGTGGGCGGCTGTCAGTGGCGTGCGGGCCCGGGCT +
Preference number: 6 (lower is better)
Translates to: LGVQTTSPFLYF*WAAVSGVRARA
Trigger: AGCCCGGGCCCGCACGCCACTGACAGCCGCCCAGCAGAAGTACAAGAAGGGCGATGTGGTCTGCACACCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CCA 72 bp AGCTGGGGAATTTGCTGGCCATGGTCTCAGGGCCCTTaGCGCTGGTCCGCTCCTCAGCAGGTGGGGGCAGTG +
Preference number: 6 (lower is better)
Translates to: SWGICWPWSQGP*RWSAPQQVGAV
Trigger: CACTGCCCCCACCTGCTGAGGAGCGGACCAGCGCCAAGGGCCCTGAGACCATGGCCAGCAAATTCCCCAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS CCA 72 bp ATAGCTGCCACTGGTGCTGCCAGGGGGCCAAGGGCCTaGACCACAAGCCTCAGCCGGCTCATCCTCCAGGTC +
Preference number: 6 (lower is better)
Translates to: IAATGAARGPRA*TTSLSRLILQV
Trigger: GACCTGGAGGATGAGCCGGCTGAGGCTTGTGGTCCAGGCCCTTGGCCCCCTGGCAGCACCAGTGGCAGCTAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CCA 72 bp GGCGTGGCCGTGAGTCTCCACGAGCCGCCACACTGCTaGCCTCACTGTCCCTCGACGTCTCATCACCCCAGT +
Preference number: 6 (lower is better)
Translates to: GVAVSLHEPPHC*PHCPSTSHHPS
Trigger: ACTGGGGTGATGAGACGTCGAGGGACAGTGAGGCCAGCAGTGTGGCGGCTCGTGGAGACTCACGGCCACGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CCA 72 bp GTGAGGGTGATGGGGCTGGCGAGAAGGGCGATTGAGTaGAGACGGGTGAGAAGGAGGGCGTGCCTGAGCGCG +
Preference number: 6 (lower is better)
Translates to: VRVMGLARRAIE*RRVRRRACLSA
Trigger: CGCGCTCAGGCACGCCCTCCTTCTCACCCGTCTCCACTCAATCGCCCTTCTCGCCAGCCCCATCACCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CCA 72 bp GTCAGCACGCCTGCCTTAGGGGTGCTGGCGCTCAGGTaGCGACTGCGGACTGCAGTGCGCTGGATGACTGGT +
Preference number: 6 (lower is better)
Translates to: VSTPALGVLALR*RLRTAVRWMTG
Trigger: ACCAGTCATCCAGCGCACTGCAGTCCGCAGTCGCCACCTGAGCGCCAGCACCCCTAAGGCAGGCGTGCTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CCA 72 bp AAGGGTGAAGAAGCCAGGCCAAAGGCGGGCATCGGCTaGGCCACGGCAGTTGGTGCAGCTGGAGGCACGGTG +
Preference number: 6 (lower is better)
Translates to: KGEEARPKAGIG*ATAVGAAGGTV
Trigger: CACCGTGCCTCCAGCTGCACCAACTGCCGTGGCCCAGCCGATGCCCGCCTTTGGCCTGGCTTCTTCACCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CAA 72 bp GAGCTGGGGAATTTGCTGGCCATGGTCTCAGGGCCCTaGGCGCTGGTCCGCTCCTCAGCAGGTGGGGGCAGT +
Preference number: 6 (lower is better)
Translates to: ELGNLLAMVSGP*ALVRSSAGGGS
Trigger: ACTGCCCCCACCTGCTGAGGAGCGGACCAGCGCCAAGGGCCCTGAGACCATGGCCAGCAAATTCCCCAGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS CAA 90 bp TTAGAGGCGATGGGCACAGGAGTGCTGCTGACAGGCCGCACCACATaGGTGACCATGGTGGCGGCAGGACGGGACAGGGGAGCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: LEAMGTGVLLTGRTT*VTMVAAGRDRGAAG
Trigger: CCCAGCAGCTCCCCTGTCCCGTCCTGCCGCCACCATGGTCACCAATGTGGTGCGGCCTGTCAGCAGCACTCCTGTGCCCATCGCCTCTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS CAA 90 bp GGCAGCGTGGGCAGGATGTACTGTACCTGGGTGATTCCCCCAGCCTaGCCCAGGGCACCTGGTTGCAGGATGCCCAGGGGTACTGGCCCA +
Preference number: 6 (lower is better)
Translates to: GSVGRMYCTWVIPPA*PRAPGCRMPRGTGP
Trigger: TGGGCCAGTACCCCTGGGCATCCTGCAACCAGGTGCCCTGGGCAAGGCTGGGGGAATCACCCAGGTACAGTACATCCTGCCCACGCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS TCA 72 bp CACCACCGTTACTCCGCACTTAGCACCCCGACACCTTaGCCCCTGCAGTCCCAGGGCCCAGGCGCTACTGAC +
Preference number: 6 (lower is better)
Translates to: HHRYSALSTPTP*PLQSQGPGATD
Trigger: GTCAGTAGCGCCTGGGCCCTGGGACTGCAGGGGTCAAGGTGTCGGGGTGCTAAGTGCGGAGTAACGGTGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684265.1
CDS GCA 72 bp CACCCAGCGGGGAGCCCCCAGGCACCCGAGACCCAGTaGCCATTTCAGTCCTGGCACCTGCTGTGTCATTTG +
Preference number: 6 (lower is better)
Translates to: HPAGSPQAPETQ*PFQSWHLLCHL
Trigger: CAAATGACACAGCAGGTGCCAGGACTGAAATGGGCACTGGGTCTCGGGTGCCTGGGGGCTCCCCGCTGGGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS GCA 72 bp CAAGCCTCAGCCGGCTCATCCTCCAGGTCCGCCGAGTaGTCGCTGGCTGTGTCAGTGGAGGAGGAACGAGTG +
Preference number: 6 (lower is better)
Translates to: QASAGSSSRSAE*SLAVSVEEERV
Trigger: CACTCGTTCCTCCTCCACTGACACAGCCAGCGAGCACTCGGCGGACCTGGAGGATGAGCCGGCTGAGGCTTG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS GCA 72 bp GGCGTGAGCAGTAGCCTCGCCGCTGTGACTCCTTCATaGAGCCATCTCGTGAGCACAGCCGGCGCCACTGCT +
Preference number: 6 (lower is better)
Translates to: GVSSSLAAVTPS*SHLVSTAGATA
Trigger: AGCAGTGGCGCCGGCTGTGCTCACGAGATGGCTGCATGAAGGAGTCACAGCGGCGAGGCTACTGCTCACGCC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS GCA 72 bp AGGGCGATTGAGTGGAGACGGGTGAGAAGGAGGGCGTaGCTGAGCGCGAGCTGCCCAGCGACACCAGCATCA +
Preference number: 6 (lower is better)
Translates to: RAIEWRRVRRRA*LSASCPATPAS
Trigger: TGATGCTGGTGTCGCTGGGCAGCTCGCGCTCAGGCACGCCCTCCTTCTCACCCGTCTCCACTCAATCGCCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CCA 72 bp GGCCCTGCCCAGGGACGCGCCAGTCTGAAGATGAGCTaGGGAATTTGCTGGCCATGGTCTCAGGGCCCTTGG +
Preference number: 6 (lower is better)
Translates to: GPAQGRASLKMS*GICWPWSQGPW
Trigger: CCAAGGGCCCTGAGACCATGGCCAGCAAATTCCCCAGCTCATCTTCAGACTGGCGCGTCCCTGGGCAGGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS CAA 72 bp ATGGGCACAGGAGTGCTGCTGACAGGCCGCACCACATaGGTGACCATGGTGGCGGCAGGACGGGACAGGGGA +
Preference number: 6 (lower is better)
Translates to: MGTGVLLTGRTT*VTMVAAGRDRG
Trigger: TCCCCTGTCCCGTCCTGCCGCCACCATGGTCACCAATGTGGTGCGGCCTGTCAGCAGCACTCCTGTGCCCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS TCA 72 bp TGGCTGCTGCCGACTTCTTGTCCGAATACACTAAGCTaGCACCCAGCGGGGAGCCCCCAGGCACCCGAGACC +
Preference number: 6 (lower is better)
Translates to: WLLPTSCPNTLS*HPAGSPQAPET
Trigger: GGTCTCGGGTGCCTGGGGGCTCCCCGCTGGGTGTCAGCTTAGTGTATTCGGACAAGAAGTCGGCAGCAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS GCA 72 bp TCTTGCTCCTCCTTGTTTGGGGGCAGCACCAGTGTCTaGAGGATGTTTCCTCCTCCGCTGGGAGGGGCCGCG +
Preference number: 6 (lower is better)
Translates to: SCSSLFGGSTSV*RMFPPPLGGAA
Trigger: CGCGGCCCCTCCCAGCGGAGGAGGAAACATCCTGCAGACACTGGTGCTGCCCCCAAACAAGGAGGAGCAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS CCA 72 bp CCCCAGGCACCCGAGACCCAGTGCCCATTTCAGTCCTaGCACCTGCTGTGTCATTTGGAGACGCCTCAGCCC +
Preference number: 6 (lower is better)
Translates to: PQAPETQCPFQS*HLLCHLETPQP
Trigger: GGGCTGAGGCGTCTCCAAATGACACAGCAGGTGCCAGGACTGAAATGGGCACTGGGTCTCGGGTGCCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS CCA 72 bp CGGAGGGTACAGACTGCAGGATGGGGATGCCAGGAGTaGGTGCAGTGGCAGCCAGGACTTTGCCGTTGGTGG +
Preference number: 6 (lower is better)
Translates to: RRVQTAGWGCQE*VQWQPGLCRWW
Trigger: CCACCAACGGCAAAGTCCTGGCTGCCACTGCACCCACTCCTGGCATCCCCATCCTGCAGTCTGTACCCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS CAA 72 bp GGCAGGATGTACTGTACCTGGGTGATTCCCCCAGCCTaGCCCAGGGCACCTGGTTGCAGGATGCCCAGGGGT +
Preference number: 6 (lower is better)
Translates to: GRMYCTWVIPPA*PRAPGCRMPRG
Trigger: ACCCCTGGGCATCCTGCAACCAGGTGCCCTGGGCAAGGCTGGGGGAATCACCCAGGTACAGTACATCCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS CAA 72 bp TTCTTCTTGGGCGCTCGAGACTTGAACGTGGCTGTCTaGCGGCTGAGTGAGGGCTCCCAGCGGCCTGCCTCC +
Preference number: 6 (lower is better)
Translates to: FFLGARDLNVAV*RLSEGSQRPAS
Trigger: GGAGGCAGGCCGCTGGGAGCCCTCACTCAGCCGCAAGACAGCCACGTTCAAGTCTCGAGCGCCCAAGAAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CAA 90 bp CCCCCAGCCCGCACCTCACCAGCAGTGCCCACCTCCCCAGGGAATTaGGAGGGCAGTGGCACATCAGGGTTGCGGACAATAACAGGTGAG +
Preference number: 6 (lower is better)
Translates to: PPARTSPAVPTSPGN*EGSGTSGLRTITGE
Trigger: CTCACCTGTTATTGTCCGCAACCCTGATGTGCCACTGCCCTCCAAATTCCCTGGGGAGGTGGGCACTGCTGGTGAGGTGCGGGCTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CAA 90 bp TCCACATACTTCTTCTTGGGCGCTCGAGACTTGAACGTGGCTGTCTaGCGGCTGAGTGAGGGCTCCCAGCGGCCTGCCTCCCCATCCCCT +
Preference number: 6 (lower is better)
Translates to: STYFFLGARDLNVAV*RLSEGSQRPASPSP
Trigger: AGGGGATGGGGAGGCAGGCCGCTGGGAGCCCTCACTCAGCCGCAAGACAGCCACGTTCAAGTCTCGAGCGCCCAAGAAGAAGTATGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CAA 90 bp CCAGCTCCGTGCTCCTCCACATACTTCTTCTTGGGCGCTCGAGACTaGAACGTGGCTGTCTTGCGGCTGAGTGAGGGCTCCCAGCGGCCT +
Preference number: 6 (lower is better)
Translates to: PAPCSSTYFFLGARD*NVAVLRLSEGSQRP
Trigger: AGGCCGCTGGGAGCCCTCACTCAGCCGCAAGACAGCCACGTTCAAGTCTCGAGCGCCCAAGAAGAAGTATGTGGAGGAGCACGGAGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CAA 90 bp TCTGTCTTCCGTCGCCCAGGGCTGATGGGCACGGTGAAGGTCAGGTaGGTCTGGAAGGTGGGTAGGATTCCAGAGGAGTGGCGCTCTCGG +
Preference number: 6 (lower is better)
Translates to: SVFRRPGLMGTVKVR*VWKVGRIPEEWRSR
Trigger: CCGAGAGCGCCACTCCTCTGGAATCCTACCCACCTTCCAGACCAACCTGACCTTCACCGTGCCCATCAGCCCTGGGCGACGGAAGACAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS TCA 72 bp AGGTGGGTGCAGGGCTGCCAGAGTAAAATGCTGTTATaGCAGGACCTCCGGGGGCTGCACAGGCAGGCGGCA +
Preference number: 6 (lower is better)
Translates to: RWVQGCQSKMLL*QDLRGLHRQAA
Trigger: TGCCGCCTGCCTGTGCAGCCCCCGGAGGTCCTGTCATAACAGCATTTTACTCTGGCAGCCCTGCACCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS TCA 72 bp GGGCAGTGGCACATCAGGGTTGCGGACAATAACAGGTaGGTCCCGCTGCACAGCAGGCACCCTGCGCACAGA +
Preference number: 6 (lower is better)
Translates to: GQWHIRVADNNR*VPLHSRHPAHR
Trigger: TCTGTGCGCAGGGTGCCTGCTGTGCAGCGGGACTCACCTGTTATTGTCCGCAACCCTGATGTGCCACTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS GCA 72 bp ACATCAGGGTTGCGGACAATAACAGGTGAGTCCCGCTaGACAGCAGGCACCCTGCGCACAGAGGGCCCTGGA +
Preference number: 6 (lower is better)
Translates to: TSGLRTITGESR*TAGTLRTEGPG
Trigger: TCCAGGGCCCTCTGTGCGCAGGGTGCCTGCTGTGCAGCGGGACTCACCTGTTATTGTCCGCAACCCTGATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CCA 72 bp GCCCGGAAGCCAGCCGGCGTGGAGGGTGTAGGTGTGTaGGACACTGAGTCCACACCAGAGTCTAAGCTGTCA +
Preference number: 6 (lower is better)
Translates to: ARKPAGVEGVGV*DTESTPESKLS
Trigger: TGACAGCTTAGACTCTGGTGTGGACTCAGTGTCCCACACACCTACACCCTCCACGCCGGCTGGCTTCCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CCA 72 bp CTTCCTTCTTGGGGGCAGGGTGGCTGGTATAGCTGCTaGGCACCAAAACGGGCAACAGGGCAGCAGGTGAGG +
Preference number: 6 (lower is better)
Translates to: LPSWGQGGWYSC*APKRATGQQVR
Trigger: CCTCACCTGCTGCCCTGTTGCCCGTTTTGGTGCCCAGCAGCTATACCAGCCACCCTGCCCCCAAGAAGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CAA 72 bp CGTATTCCGCTGGGTGTGCAGACCACATCGCCCTTCTaGTACTTCTGCTGGGCGGCTGTCAGTGGCGTGCGG +
Preference number: 6 (lower is better)
Translates to: RIPLGVQTTSPF*YFCWAAVSGVR
Trigger: CCGCACGCCACTGACAGCCGCCCAGCAGAAGTACAAGAAGGGCGATGTGGTCTGCACACCCAGCGGAATACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CAA 72 bp CGTCGCCCAGGGCTGATGGGCACGGTGAAGGTCAGGTaGGTCTGGAAGGTGGGTAGGATTCCAGAGGAGTGG +
Preference number: 6 (lower is better)
Translates to: RRPGLMGTVKVR*VWKVGRIPEEW
Trigger: CCACTCCTCTGGAATCCTACCCACCTTCCAGACCAACCTGACCTTCACCGTGCCCATCAGCCCTGGGCGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CAA 90 bp GCCACCCCACTGCTGCCAGCTCCGTGCTCCTCCACATACTTCTTCTaGGGCGCTCGAGACTTGAACGTGGCTGTCTTGCGGCTGAGTGAG +
Preference number: 6 (lower is better)
Translates to: ATPLLPAPCSSTYFF*GARDLNVAVLRLSE
Trigger: CTCACTCAGCCGCAAGACAGCCACGTTCAAGTCTCGAGCGCCCAAGAAGAAGTATGTGGAGGAGCACGGAGCTGGCAGCAGTGGGGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CAA 90 bp AACTTCTTTCGTATTCCGCTGGGTGTGCAGACCACATCGCCCTTCTaGTACTTCTGCTGGGCGGCTGTCAGTGGCGTGCGGGCCCGGGCT +
Preference number: 6 (lower is better)
Translates to: NFFRIPLGVQTTSPF*YFCWAAVSGVRARA
Trigger: AGCCCGGGCCCGCACGCCACTGACAGCCGCCCAGCAGAAGTACAAGAAGGGCGATGTGGTCTGCACACCCAGCGGAATACGAAAGAAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CAA 90 bp AGGTGGCGACTGCGGACTGCAGTGCGCTGGATGACTGGTGAGGCATaGATGGGGCTAAAGTTGGCAGGGCGGAAGCCGAAGAGTGGTGAG +
Preference number: 6 (lower is better)
Translates to: RWRLRTAVRWMTGEA*MGLKLAGRKPKSGE
Trigger: CTCACCACTCTTCGGCTTCCGCCCTGCCAACTTTAGCCCCATCAATGCCTCACCAGTCATCCAGCGCACTGCAGTCCGCAGTCGCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS TCA 72 bp GGCACAGGCAGCATGGCAAGGCTGTACGGTCAAAGGTaGAGATGTCCCCCTCGCACTTGGCACTCTTGGGGG +
Preference number: 6 (lower is better)
Translates to: GTGSMARLYGQR*RCPPRTWHSWG
Trigger: CCCCCAAGAGTGCCAAGTGCGAGGGGGACATCTTCACCTTTGACCGTACAGCCTTGCCATGCTGCCTGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575287.1
CDS TCA 72 bp AGGCCTTCCCTTGATCCGGATCAACCTGACCTGAGGTaGCCTCCCCATGCCTTCAGAAGCCTGGACAGGGGG +
Preference number: 6 (lower is better)
Translates to: RPSLDPDQPDLR*PPHAFRSLDRG
Trigger: CCCCCTGTCCAGGCTTCTGAAGGCATGGGGAGGTCACCTCAGGTCAGGTTGATCCGGATCAAGGGAAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684265.1
CDS GCA 72 bp TGCAGCAGCGGCAGGGCCTTCCTGCCACCGTCTGAGTaGCCACCCAAGCCCTCACTGCATTCTATTTCACAG +
Preference number: 6 (lower is better)
Translates to: CSSGRAFLPPSE*PPKPSLHSISQ
Trigger: CTGTGAAATAGAATGCAGTGAGGGCTTGGGTGGGCACTCAGACGGTGGCAGGAAGGCCCTGCCGCTGCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571033.1
CDS CCA 72 bp GGTACAGACAGCTGTGCCCACCACCAGGGCACCTGGTaGGGGTGTGGCATCCAAAACTACATCCACACCAGC +
Preference number: 6 (lower is better)
Translates to: GTDSCAHHQGTW*GCGIQNYIHTS
Trigger: GCTGGTGTGGATGTAGTTTTGGATGCCACACCCCCACCAGGTGCCCTGGTGGTGGGCACAGCTGTCTGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CCA 72 bp CACTGTCTGCCAGGCCTTCCATCTCTTTGGTTCGCATaGACAGGTGGCGTGAGCAGTAGCCTCGCCGCTGTG +
Preference number: 6 (lower is better)
Translates to: HCLPGLPSLWFA*TGGVSSSLAAV
Trigger: CACAGCGGCGAGGCTACTGCTCACGCCACCTGTCCATGCGAACCAAAGAGATGGAAGGCCTGGCAGACAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CCA 72 bp CTGGCGCTCAGGTGGCGACTGCGGACTGCAGTGCGCTaGATGACTGGTGAGGCATTGATGGGGCTAAAGTTG +
Preference number: 6 (lower is better)
Translates to: LALRWRLRTAVR*MTGEALMGLKL
Trigger: CAACTTTAGCCCCATCAATGCCTCACCAGTCATCCAGCGCACTGCAGTCCGCAGTCGCCACCTGAGCGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CAA 72 bp CTGCGGACTGCAGTGCGCTGGATGACTGGTGAGGCATaGATGGGGCTAAAGTTGGCAGGGCGGAAGCCGAAG +
Preference number: 6 (lower is better)
Translates to: LRTAVRWMTGEA*MGLKLAGRKPK
Trigger: CTTCGGCTTCCGCCCTGCCAACTTTAGCCCCATCAATGCCTCACCAGTCATCCAGCGCACTGCAGTCCGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS GCA 72 bp TCCTGCCACCGTCTGAGTGCCCACCCAAGCCCTCACTaGATTCTATTTCACAGGGGAGTCAGAGAGGGGTCC +
Preference number: 6 (lower is better)
Translates to: SCHRLSAHPSPH*ILFHRGVREGS
Trigger: GGACCCCTCTCTGACTCCCCTGTGAAATAGAATGCAGTGAGGGCTTGGGTGGGCACTCAGACGGTGGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571033.1
CDS CCA 72 bp GGGTGTGGCATCCAAAACTACATCCACACCAGCGCCTaGCACCCCCTCATAGAAAGTCAGGGCTCGGTCACC +
Preference number: 6 (lower is better)
Translates to: GCGIQNYIHTSA*HPLIESQGSVT
Trigger: GGTGACCGAGCCCTGACTTTCTATGAGGGGGTGCCAGGCGCTGGTGTGGATGTAGTTTTGGATGCCACACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CCA 72 bp ACAGGTACAGACAGCTGTGCCCACCACCAGGGCACCTaGTGGGGGTGTGGCATCCAAAACTACATCCACACC +
Preference number: 6 (lower is better)
Translates to: TGTDSCAHHQGT*WGCGIQNYIHT
Trigger: GGTGTGGATGTAGTTTTGGATGCCACACCCCCACCAGGTGCCCTGGTGGTGGGCACAGCTGTCTGTACCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CAA 72 bp CTGCTGCCAGCTCCGTGCTCCTCCACATACTTCTTCTaGGGCGCTCGAGACTTGAACGTGGCTGTCTTGCGG +
Preference number: 6 (lower is better)
Translates to: LLPAPCSSTYFF*GARDLNVAVLR
Trigger: CCGCAAGACAGCCACGTTCAAGTCTCGAGCGCCCAAGAAGAAGTATGTGGAGGAGCACGGAGCTGGCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CAA 72 bp CCATCTCGTGAGCACAGCCGGCGCCACTGCTTGCCGTaGAACTTCTTTCGTATTCCGCTGGGTGTGCAGACC +
Preference number: 6 (lower is better)
Translates to: PSREHSRRHCLP*NFFRIPLGVQT
Trigger: GGTCTGCACACCCAGCGGAATACGAAAGAAGTTCAACGGCAAGCAGTGGCGCCGGCTGTGCTCACGAGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CAA 90 bp TTCATGCAGCCATCTCGTGAGCACAGCCGGCGCCACTGCTTGCCGTaGAACTTCTTTCGTATTCCGCTGGGTGTGCAGACCACATCGCCC +
Preference number: 6 (lower is better)
Translates to: FMQPSREHSRRHCLP*NFFRIPLGVQTTSP
Trigger: GGGCGATGTGGTCTGCACACCCAGCGGAATACGAAAGAAGTTCAACGGCAAGCAGTGGCGCCGGCTGTGCTCACGAGATGGCTGCATGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CAA 90 bp GACTCCTTCATGCAGCCATCTCGTGAGCACAGCCGGCGCCACTGCTaGCCGTTGAACTTCTTTCGTATTCCGCTGGGTGTGCAGACCACA +
Preference number: 6 (lower is better)
Translates to: DSFMQPSREHSRRHC*PLNFFRIPLGVQTT
Trigger: TGTGGTCTGCACACCCAGCGGAATACGAAAGAAGTTCAACGGCAAGCAGTGGCGCCGGCTGTGCTCACGAGATGGCTGCATGAAGGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CCA 72 bp ATTGGCTTCATTTTTGTCCACCCGTATTCCTGGCTCTaGCGTCGCCGGTGGCTCCTCTCAGTGGCAGCGGTA +
Preference number: 6 (lower is better)
Translates to: IGFIFVHPYSWL*RRRWLLSVAAV
Trigger: TACCGCTGCCACTGAGAGGAGCCACCGGCGACGCCAGAGCCAGGAATACGGGTGGACAAAAATGAAGCCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572681.6
CDS CAA 72 bp TGCTCCTCCACATACTTCTTCTTGGGCGCTCGAGACTaGAACGTGGCTGTCTTGCGGCTGAGTGAGGGCTCC +
Preference number: 6 (lower is better)
Translates to: CSSTYFFLGARD*NVAVLRLSEGS
Trigger: GGAGCCCTCACTCAGCCGCAAGACAGCCACGTTCAAGTCTCGAGCGCCCAAGAAGAAGTATGTGGAGGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CAA 72 bp ATGCAGCCATCTCGTGAGCACAGCCGGCGCCACTGCTaGCCGTTGAACTTCTTTCGTATTCCGCTGGGTGTG +
Preference number: 6 (lower is better)
Translates to: MQPSREHSRRHC*PLNFFRIPLGV
Trigger: CACACCCAGCGGAATACGAAAGAAGTTCAACGGCAAGCAGTGGCGCCGGCTGTGCTCACGAGATGGCTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS TCA 72 bp ATTCCAGGCCTTCCCTTGATCCGGATCAACCTGACCTaGGGTGACCTCCCCATGCCTTCAGAAGCCTGGACA +
Preference number: 6 (lower is better)
Translates to: IPGLPLIRINLT*GDLPMPSEAWT
Trigger: TGTCCAGGCTTCTGAAGGCATGGGGAGGTCACCTCAGGTCAGGTTGATCCGGATCAAGGGAAGGCCTGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684265.1
CDS GCA 72 bp TTCATGCAGCCATCTCGTGAGCACAGCCGGCGCCACTaGTTGCCGTTGAACTTCTTTCGTATTCCGCTGGGT +
Preference number: 6 (lower is better)
Translates to: FMQPSREHSRRH*LPLNFFRIPLG
Trigger: ACCCAGCGGAATACGAAAGAAGTTCAACGGCAAGCAGTGGCGCCGGCTGTGCTCACGAGATGGCTGCATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS CCA 72 bp TTCACTATGCACAGGCTGTGGGGTCTCTTACAACTGTaGTGTGGGAGAGGTCCTGCTCCTTGCCTTCCTCCC +
Preference number: 6 (lower is better)
Translates to: FTMHRLWGLLQL*CGRGPAPCLPP
Trigger: GGGAGGAAGGCAAGGAGCAGGACCTCTCCCACACCACAGTTGTAAGAGACCCCACAGCCTGTGCATAGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684265.1
CDS CCA 72 bp CTCCCCTCCAACTCTCCGTTCACTATGCACAGGCTGTaGGGTCTCTTACAACTGTGGTGTGGGAGAGGTCCT +
Preference number: 6 (lower is better)
Translates to: LPSNSPFTMHRL*GLLQLWCGRGP
Trigger: AGGACCTCTCCCACACCACAGTTGTAAGAGACCCCACAGCCTGTGCATAGTGAACGGAGAGTTGGAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684265.1
CDS GCA 72 bp GACCAGCAGGTCTCGTGCTGTTCCTATTCTACCCCATaGTCCAGAGCCAGTTACTCTGCACCCCTCACCTTT +
Preference number: 6 (lower is better)
Translates to: DQQVSCCSYSTP*SRASYSAPLTF
Trigger: AAAGGTGAGGGGTGCAGAGTAACTGGCTCTGGAGCATGGGGTAGAATAGGAACAGCACGAGACCTGCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684265.1
CDS GCA 72 bp GTGCCAGGTGTTTCCTTGAGGATATGCACAGGAAGATaGTTCCTCACCAAGAGGCTGGTCCCAGGGGTCCAA +
Preference number: 6 (lower is better)
Translates to: VPGVSLRICTGR*FLTKRLVPGVQ
Trigger: TTGGACCCCTGGGACCAGCCTCTTGGTGAGGAAGCATCTTCCTGTGCATATCCTCAAGGAAACACCTGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684265.1
CDS CCA 72 bp GGACTTCTTTCGGTCCTTGTTGCACCACTTCCAATCTaGGTGGGCCTTGAAGTGGGCCTCCTTCACCTGGAA +
Preference number: 6 (lower is better)
Translates to: GLLSVLVAPLPI*VGLEVGLLHLE
Trigger: TTCCAGGTGAAGGAGGCCCACTTCAAGGCCCACCCAGATTGGAAGTGGTGCAACAAGGACCGAAAGAAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000572681.6
ENST00000575354.6
ENST00000681038.1
ENST00000684265.1
CDS GCA 72 bp GGGACTTGCTGCCACTGCCAGGACCTGAAAGGCCAGTaGATGCCTTCTTCATTGGCTTCATTTTTGTCCACC +
Preference number: 6 (lower is better)
Translates to: GTCCHCQDLKGQ*MPSSLASFLST
Trigger: GGTGGACAAAAATGAAGCCAATGAAGAAGGCATGCACTGGCCTTTCAGGTCCTGGCAGTGGCAGCAAGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572681.6
ENST00000681038.1
CDS GCA 72 bp CTCTGCACCCCTCACCTTTCTATTACAGCGGACCTGTaGCATCCCATCACTTTAACATCACAGCTGTCCCCA +
Preference number: 6 (lower is better)
Translates to: LCTPHLSITADL*HPITLTSQLSP
Trigger: TGGGGACAGCTGTGATGTTAAAGTGATGGGATGGCACAGGTCCGCTGTAATAGAAAGGTGAGGGGTGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684265.1
CDS TCA 72 bp AGGCAACTCAGCAAAGCGCTCTTCGAAGTCCACTTCTaGCAGGACCCTGTTGTCCACAGAGTCAAAGGTCTT +
Preference number: 6 (lower is better)
Translates to: RQLSKALFEVHF*QDPVVHRVKGL
Trigger: AAGACCTTTGACTCTGTGGACAACAGGGTCCTGTCAGAAGTGGACTTCGAAGAGCGCTTTGCTGAGTTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000160740.7
ENST00000575287.1
ENST00000575354.6
ENST00000576505.6
ENST00000681038.1
CDS TCA 72 bp TCAGGAAACAAGGGACTGGGATCACGAAGACAGCACTaGAGAGCACTCAAGACTACGATGACCCTGTCCCTT +
Preference number: 6 (lower is better)
Translates to: SGNKGLGSRRQH*RALKTTMTLSL
Trigger: AAGGGACAGGGTCATCGTAGTCTTGAGTGCTCTTCAGTGCTGTCTTCGTGATCCCAGTCCCTTGTTTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684265.1