Pregenerated sensors for CIBAR1 (Homo sapiens)
Ensembl gene IDs: ENSG00000188343Ensembl transcript IDs: ENST00000452913.6, ENST00000517718.5, ENST00000518322.6, ENST00000520955.5, ENST00000521641.5, ENST00000522324.5, ENST00000523475.5, ENST00000523577.5
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTACTGAAACAACTTTGTCACTTAGGACTATTCTCAGGAAGGAGTaGTTTGTTAAGAACAGAGCCATGATTGACAAAGTCAGAAGCTTT | + |
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Preference number: 1 (lower is better) Translates to: STETTLSLRTILRKE*FVKNRAMIDKVRSF Trigger: AAAGCTTCTGACTTTGTCAATCATGGCTCTGTTCTTAACAAAGCACTCCTTCCTGAGAATAGTCCTAAGTGACAAAGTTGTTTCAGTACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR GCA 90 bp | AAAGTTGATTACAGAAAGTGGTATCTTCTAGTTGGGAGCCATCTTTaGACATCTCTCTCCAACTCTGCCTTTAGTGATATGTCAATAACA | + |
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Preference number: 1 (lower is better) Translates to: KVDYRKWYLLVGSHL*TSLSNSAFSDMSIT Trigger: TGTTATTGACATATCACTAAAGGCAGAGTTGGAGAGAGATGTGCAAAGATGGCTCCCAACTAGAAGATACCACTTTCTGTAATCAACTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR CCA 90 bp | CTCTCCAACTCTGCCTTTAGTGATATGTCAATAACAAATTGGCCATaGCAGGAGTATTTTACACCATGGAAAGTGATAAATGCAGCAAAT | + |
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Preference number: 1 (lower is better) Translates to: LSNSAFSDMSITNWP*QEYFTPWKVINAAN Trigger: ATTTGCTGCATTTATCACTTTCCATGGTGTAAAATACTCCTGCCATGGCCAATTTGTTATTGACATATCACTAAAGGCAGAGTTGGAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR-3UTR CCA 90 bp | AGGTATACCAGGTACACTGGAGGTGTATTCTCTAGCCTGATACCCAGTGGCATTACTTACAGGCTGGGTTaGTTGGATTGGTTGCCTGTT | + |
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Preference number: 2 (lower is better) Translates to: RYTRYTGGVFSSLIPSGITYRLG*LDWLPV Trigger: AACAGGCAACCAATCCAACCAACCCAGCCTGTAAGT...AATGCCACTGGGTATCAGGCTAGAGAATACACCTCCAGTGTACCTGGTATACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR CAA 90 bp | CCATGGAAAGTGATAAATGCAGCAAATCAAGGAATTCCCCTCCTGTaGTCCCCTCAGAAAGCCAGCTTCCCAGCACCTCATCAATTTCAA | + |
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Preference number: 2 (lower is better) Translates to: PWKVINAANQGIPLL*SPQKASFPAPHQFQ Trigger: TTGAAATTGATGAGGTGCTGGGAAGCTGGCTTTCTGAGGGGACAACAGGAGGGGAATTCCTTGATTTGCTGCATTTATCACTTTCCATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR-3UTR CCA 90 bp | ATGGAAAGTGATAAATGCAGCAAATCAAGGAATTCCCCTCCTGTTGTCCCCTCATGGAGACTTACAGGCTaGGTTGGTTGGATTGGTTGC | + |
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Preference number: 2 (lower is better) Translates to: MESDKCSKSRNSPPVVPSWRLTG*VGWIGC Trigger: GCAACCAATCCAACCAACCCAGCCTGTAAGTCTCCA...TGAGGGGACAACAGGAGGGGAATTCCTTGATTTGCTGCATTTATCACTTTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR-3UTR GCA 90 bp | AGGTATACCAGGTACACTGGAGGTGTATTCTCTAGCCTGATACCCAGTGGCATTATTCTCAGGAAGGAGTaGTTTGTTAAGAACAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: RYTRYTGGVFSSLIPSGIILRKE*FVKNRA Trigger: GGCTCTGTTCTTAACAAAGCACTCCTTCCTGAGAAT...AATGCCACTGGGTATCAGGCTAGAGAATACACCTCCAGTGTACCTGGTATACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR-3UTR TCA 90 bp | ATGGAAAGTGATAAATGCAGCAAATCAAGGAATTCCCCTCCTGTTGTCCCCTCAGAACAGAGCCATGATTaGCAAAGTCAGAAGCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: MESDKCSKSRNSPPVVPSEQSHD*QSQKLS Trigger: AGAAAGCTTCTGACTTTGTCAATCATGGCTCTGTTC...TGAGGGGACAACAGGAGGGGAATTCCTTGATTTGCTGCATTTATCACTTTCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR-3UTR TCA 90 bp | TGCACATCTCTCTCCAACTCTGCCTTTAGTGATATGTCAATAACAAATTGGCCAGTGTATTCTCTAGCCTaGTACCCAGTGGCATTTGTC | + |
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Preference number: 2 (lower is better) Translates to: CTSLSNSAFSDMSITNWPVYSLA*YPVAFV Trigger: GACAAATGCCACTGGGTATCAGGCTAGAGAATACAC...TGGCCAATTTGTTATTGACATATCACTAAAGGCAGAGTTGGAGAGAGATGTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR-3UTR CCA 90 bp | ATGGAAAGTGATAAATGCAGCAAATCAAGGAATTCCCCTCCTGTTGTCCCCTCATTTGGAGATAAGAGATaGAGACTTACAGGCTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: MESDKCSKSRNSPPVVPSFGDKR*RLTGWV Trigger: AACCCAGCCTGTAAGTCTCCATCTCTTATCTCCAAA...TGAGGGGACAACAGGAGGGGAATTCCTTGATTTGCTGCATTTATCACTTTCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR-3UTR CCA 90 bp | AGGTATACCAGGTACACTGGAGGTGTATTCTCTAGCCTGATACCCAGTGGCATTAGTCTTAAATACTTCTaGTCCCAAGCACTTCAGATA | + |
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Preference number: 2 (lower is better) Translates to: RYTRYTGGVFSSLIPSGISLKYF*SQALQI Trigger: TATCTGAAGTGCTTGGGACCAGAAGTATTTAAGACT...AATGCCACTGGGTATCAGGCTAGAGAATACACCTCCAGTGTACCTGGTATACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR-3UTR GCA 90 bp | AATAAAGCTAAGATGAAGCTTAACGTGAGGGATTACTTACTGTGGAATTGCATTCTGGCCAGGCTGGAGTaGAGTGGTCTGATAATGGTT | + |
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Preference number: 2 (lower is better) Translates to: NKAKMKLNVRDYLLWNCILARLE*SGLIMV Trigger: AACCATTATCAGACCACTGCACTCCAGCCTGGCCAG...AATGCAATTCCACAGTAAGTAATCCCTCACGTTAAGCTTCATCTTAGCTTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR-3UTR GCA 90 bp | ATGGAAAGTGATAAATGCAGCAAATCAAGGAATTCCCCTCCTGTTGTCCCCTCACACAAACTTTTTGAGTaGCAACATGATGCTCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: MESDKCSKSRNSPPVVPSHKLFE*QHDAQR Trigger: TCTTTGAGCATCATGTTGGCACTCAAAAAGTTTGTG...TGAGGGGACAACAGGAGGGGAATTCCTTGATTTGCTGCATTTATCACTTTCCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR-3UTR TCA 90 bp | TGCACATCTCTCTCCAACTCTGCCTTTAGTGATATGTCAATAACAAATTGGCCATTAAGAACAGAGCCATaGTTGACAAAGTCAGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: CTSLSNSAFSDMSITNWPLRTEP*LTKSEA Trigger: AGCTTCTGACTTTGTCAATCATGGCTCTGTTCTTAA...TGGCCAATTTGTTATTGACATATCACTAAAGGCAGAGTTGGAGAGAGATGTGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR-3UTR TCA 90 bp | TCCAACTTGGATCTTAATTATACTCTTAAGACTCCTGAGGTTAACTGGCTGGAACAATATAAGGGGATTTaGATTAGGTGGCGTAACCTC | + |
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Preference number: 2 (lower is better) Translates to: SNLDLNYTLKTPEVNWLEQYKGI*IRWRNL Trigger: GAGGTTACGCCACCTAATTCAAATCCCCTTATATTG...TTCCAGCCAGTTAACCTCAGGAGTCTTAAGAGTATAATTAAGATCCAAGTTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522324.5 |
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| 3UTR-3UTR GCA 90 bp | ATGGAAAGTGATAAATGCAGCAAATCAAGGAATTCCCCTCCTGTTGTCCCCTCAGATGCTCAAAGAAAATaGTCATTGCAGCATTTAAGA | + |
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Preference number: 2 (lower is better) Translates to: MESDKCSKSRNSPPVVPSDAQRK*SLQHLR Trigger: TCTTAAATGCTGCAATGAGCATTTTCTTTGAGCATC...TGAGGGGACAACAGGAGGGGAATTCCTTGATTTGCTGCATTTATCACTTTCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR-3UTR TCA 90 bp | TGTCCAACTTGGATCTTAATTATACTCTTAAGACTCCTGAGGTTAACTGGCTGGGGGCATAGAGGACACTaGTATATTAGGATTAACAAT | + |
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Preference number: 2 (lower is better) Translates to: CPTWILIILLRLLRLTGWGHRGH*YIRINN Trigger: ATTGTTAATCCTAATATATCAGTGTCCTCTATGCCC...CCAGCCAGTTAACCTCAGGAGTCTTAAGAGTATAATTAAGATCCAAGTTGGACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000522324.5 |
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| 3UTR-3UTR TCA 90 bp | AATAAAGCTAAGATGAAGCTTAACGTGAGGGATTACTTACTGTGGAATTGCATTCCTAATCTGGTAATCTaGAATTTCACATGCTCCGAA | + |
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Preference number: 2 (lower is better) Translates to: NKAKMKLNVRDYLLWNCIPNLVI*NFTCSE Trigger: TTCGGAGCATGTGAAATTTCAGATTACCAGATTAGG...AATGCAATTCCACAGTAAGTAATCCCTCACGTTAAGCTTCATCTTAGCTTTATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR-3UTR TCA 90 bp | AATAAAGCTAAGATGAAGCTTAACGTGAGGGATTACTTACTGTGGAATTGCATTAAGAGCAGTGATTCTTaGTCCATATATCACCTGTTA | + |
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Preference number: 2 (lower is better) Translates to: NKAKMKLNVRDYLLWNCIKSSDS*SIYHLL Trigger: TAACAGGTGATATATGGATCAAGAATCACTGCTCTT...AATGCAATTCCACAGTAAGTAATCCCTCACGTTAAGCTTCATCTTAGCTTTATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR-3UTR CCA 90 bp | AATAAAGCTAAGATGAAGCTTAACGTGAGGGATTACTTACTGTGGAATTGCATTGAGTATTTTACACCATaGAAAGTGATAAATGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: NKAKMKLNVRDYLLWNCIEYFTP*KVINAA Trigger: TGCTGCATTTATCACTTTCCATGGTGTAAAATACTC...AATGCAATTCCACAGTAAGTAATCCCTCACGTTAAGCTTCATCTTAGCTTTATT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR-3UTR CAA 90 bp | AGGTATACCAGGTACACTGGAGGTGTATTCTCTAGCCTGATACCCAGTGGCATTTACAGGCTGGGTTGGTaGGATTGGTTGCCTGTTTTT | + |
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Preference number: 3 (lower is better) Translates to: RYTRYTGGVFSSLIPSGIYRLGW*DWLPVF Trigger: AAAAACAGGCAACCAATCCAACCAACCCAGCCTGTA...AATGCCACTGGGTATCAGGCTAGAGAATACACCTCCAGTGTACCTGGTATACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR GCA 72 bp | ATGAAGCTTAACGTGAGGGATTACTTACTGTGGAATTaGATTTCAAACTGGGCTGAGGTGGGATGGTGGTGG | + |
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Preference number: 3 (lower is better) Translates to: MKLNVRDYLLWN*ISNWAEVGWWW Trigger: CCACCACCATCCCACCTCAGCCCAGTTTGAAATGCAATTCCACAGTAAGTAATCCCTCACGTTAAGCTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR-3UTR CAA 90 bp | TGCACATCTCTCTCCAACTCTGCCTTTAGTGATATGTCAATAACAAATTGGCCAGACTTACAGGCTGGGTaGGTTGGATTGGTTGCCTGT | + |
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Preference number: 3 (lower is better) Translates to: CTSLSNSAFSDMSITNWPDLQAG*VGLVAC Trigger: ACAGGCAACCAATCCAACCAACCCAGCCTGTAAGTC...TGGCCAATTTGTTATTGACATATCACTAAAGGCAGAGTTGGAGAGAGATGTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR CCA 72 bp | GCTAAGATGAAGCTTAACGTGAGGGATTACTTACTGTaGAATTGCATTTCAAACTGGGCTGAGGTGGGATGG | + |
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Preference number: 3 (lower is better) Translates to: AKMKLNVRDYLL*NCISNWAEVGW Trigger: CCATCCCACCTCAGCCCAGTTTGAAATGCAATTCCACAGTAAGTAATCCCTCACGTTAAGCTTCATCTTAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR TCA 72 bp | GGTATACCAGGTACACTGGAGGTGTATTCTCTAGCCTaGTACCCAGTGGCATTTGTCTTAAAGCCAAACATT | + |
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Preference number: 3 (lower is better) Translates to: GIPGTLEVYSLA*YPVAFVLKPNI Trigger: AATGTTTGGCTTTAAGACAAATGCCACTGGGTATCAGGCTAGAGAATACACCTCCAGTGTACCTGGTATACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR GCA 72 bp | ATGGCAGGAGTATTTTACACCATGGAAAGTGATAAATaGAGCAAATCAAGGAATTCCCCTCCTGTTGTCCCC | + |
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Preference number: 3 (lower is better) Translates to: MAGVFYTMESDK*SKSRNSPPVVP Trigger: GGGGACAACAGGAGGGGAATTCCTTGATTTGCTGCATTTATCACTTTCCATGGTGTAAAATACTCCTGCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR-3UTR CAA 90 bp | AGGTATACCAGGTACACTGGAGGTGTATTCTCTAGCCTGATACCCAGTGGCATTAGTACTGAAACAACTTaGTCACTTAGGACTATTCTC | + |
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Preference number: 3 (lower is better) Translates to: RYTRYTGGVFSSLIPSGISTETT*SLRTIL Trigger: GAGAATAGTCCTAAGTGACAAAGTTGTTTCAGTACT...AATGCCACTGGGTATCAGGCTAGAGAATACACCTCCAGTGTACCTGGTATACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR-3UTR CAA 90 bp | ATGGAAAGTGATAAATGCAGCAAATCAAGGAATTCCCCTCCTGTTGTCCCCTCAAAAATCACAAACTTTTaGAGTGCCAACATGATGCTC | + |
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Preference number: 3 (lower is better) Translates to: MESDKCSKSRNSPPVVPSKITNF*SANMML Trigger: GAGCATCATGTTGGCACTCAAAAAGTTTGTGATTTT...TGAGGGGACAACAGGAGGGGAATTCCTTGATTTGCTGCATTTATCACTTTCCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR GCA 72 bp | ACAACTTTGTCACTTAGGACTATTCTCAGGAAGGAGTaGTTTGTTAAGAACAGAGCCATGATTGACAAAGTC | + |
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Preference number: 3 (lower is better) Translates to: TTLSLRTILRKE*FVKNRAMIDKV Trigger: GACTTTGTCAATCATGGCTCTGTTCTTAACAAAGCACTCCTTCCTGAGAATAGTCCTAAGTGACAAAGTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR CCA 72 bp | ATACTCAATTTGTATTCCTATTTTGGAGATAAGAGATaGAGACTTACAGGCTGGGTTGGTTGGATTGGTTGC | + |
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Preference number: 3 (lower is better) Translates to: ILNLYSYFGDKR*RLTGWVGWIGC Trigger: GCAACCAATCCAACCAACCCAGCCTGTAAGTCTCCATCTCTTATCTCCAAAATAGGAATACAAATTGAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR CCA 72 bp | TCCAACTCTGCCTTTAGTGATATGTCAATAACAAATTaGCCATGGCAGGAGTATTTTACACCATGGAAAGTG | + |
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Preference number: 3 (lower is better) Translates to: SNSAFSDMSITN*PWQEYFTPWKV Trigger: CACTTTCCATGGTGTAAAATACTCCTGCCATGGCCAATTTGTTATTGACATATCACTAAAGGCAGAGTTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR-3UTR CAA 90 bp | AATAAAGCTAAGATGAAGCTTAACGTGAGGGATTACTTACTGTGGAATTGCATTACCTGTATAATAGTCTaGAATTTGCCTAAACCCACG | + |
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Preference number: 3 (lower is better) Translates to: NKAKMKLNVRDYLLWNCITCIIV*NLPKPT Trigger: CGTGGGTTTAGGCAAATTCAAGACTATTATACAGGT...AATGCAATTCCACAGTAAGTAATCCCTCACGTTAAGCTTCATCTTAGCTTTATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR-3UTR CAA 90 bp | AATAAAGCTAAGATGAAGCTTAACGTGAGGGATTACTTACTGTGGAATTGCATTAATGCTCAAGAGAAGTaGCTATTTAGTAAGCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: NKAKMKLNVRDYLLWNCINAQEK*LFSKQQ Trigger: TTGCTGCTTACTAAATAGCAACTTCTCTTGAGCATT...AATGCAATTCCACAGTAAGTAATCCCTCACGTTAAGCTTCATCTTAGCTTTATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR CCA 72 bp | TCTGCCTTTAGTGATATGTCAATAACAAATTGGCCATaGCAGGAGTATTTTACACCATGGAAAGTGATAAAT | + |
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Preference number: 3 (lower is better) Translates to: SAFSDMSITNWP*QEYFTPWKVIN Trigger: ATTTATCACTTTCCATGGTGTAAAATACTCCTGCCATGGCCAATTTGTTATTGACATATCACTAAAGGCAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR CAA 72 bp | GTGATAAATGCAGCAAATCAAGGAATTCCCCTCCTGTaGTCCCCTCAGAAAGCCAGCTTCCCAGCACCTCAT | + |
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Preference number: 4 (lower is better) Translates to: VINAANQGIPLL*SPQKASFPAPH Trigger: ATGAGGTGCTGGGAAGCTGGCTTTCTGAGGGGACAACAGGAGGGGAATTCCTTGATTTGCTGCATTTATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS-3UTR CCA 90 bp | TGCACATCTCTCTCCAACTCTGCCTTTAGTGATATGTCAATAACAAATTGGCCACAGCCTCCTGAGAGCTaGGACTACAGGTGTGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: CTSLSNSAFSDMSITNWPQPPES*DYRCVP Trigger: TGGCACACACCTGTAGTCCCAGCTCTCAGGAGGCTG...TGGCCAATTTGTTATTGACATATCACTAAAGGCAGAGTTGGAGAGAGATGTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS-3UTR CCA 90 bp | AGGTATACCAGGTACACTGGAGGTGTATTCTCTAGCCTGATACCCAGTGGCATTAATTGCATTTCAAACTaGGCTGAGGTGGGATGGTGG | + |
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Preference number: 4 (lower is better) Translates to: RYTRYTGGVFSSLIPSGINCISN*AEVGWW Trigger: CCACCATCCCACCTCAGCCCAGTTTGAAATGCAATT...AATGCCACTGGGTATCAGGCTAGAGAATACACCTCCAGTGTACCTGGTATACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS-3UTR TCA 90 bp | AGGTATACCAGGTACACTGGAGGTGTATTCTCTAGCCTGATACCCAGTGGCATTTTCCGTTTCTGCCTGTaGAATAACATGTCGATCAGA | + |
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Preference number: 4 (lower is better) Translates to: RYTRYTGGVFSSLIPSGIFRFCL*NNMSIR Trigger: TCTGATCGACATGTTATTTCACAGGCAGAAACGGAA...AATGCCACTGGGTATCAGGCTAGAGAATACACCTCCAGTGTACCTGGTATACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS-3UTR TCA 90 bp | TGCACATCTCTCTCCAACTCTGCCTTTAGTGATATGTCAATAACAAATTGGCCACATTTCAAACTGGGCTaGGGTGGGATGGTGGTGGTA | + |
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Preference number: 4 (lower is better) Translates to: CTSLSNSAFSDMSITNWPHFKLG*GGMVVV Trigger: TACCACCACCATCCCACCTCAGCCCAGTTTGAAATG...TGGCCAATTTGTTATTGACATATCACTAAAGGCAGAGTTGGAGAGAGATGTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS-3UTR GCA 90 bp | TGCACATCTCTCTCCAACTCTGCCTTTAGTGATATGTCAATAACAAATTGGCCACTGGCCAGGCTGGAGTaGAGTGGTCTGATAATGGTT | + |
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Preference number: 4 (lower is better) Translates to: CTSLSNSAFSDMSITNWPLARLE*SGLIMV Trigger: AACCATTATCAGACCACTGCACTCCAGCCTGGCCAG...TGGCCAATTTGTTATTGACATATCACTAAAGGCAGAGTTGGAGAGAGATGTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS-3UTR CCA 90 bp | TGCACATCTCTCTCCAACTCTGCCTTTAGTGATATGTCAATAACAAATTGGCCATGGAGACTTACAGGCTaGGTTGGTTGGATTGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: CTSLSNSAFSDMSITNWPWRLTG*VGWIGC Trigger: GCAACCAATCCAACCAACCCAGCCTGTAAGTCTCCA...TGGCCAATTTGTTATTGACATATCACTAAAGGCAGAGTTGGAGAGAGATGTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS-3UTR TCA 90 bp | AGGTATACCAGGTACACTGGAGGTGTATTCTCTAGCCTGATACCCAGTGGCATTAAGAGCAGTGATTCTTaGTCCATATATCACCTGTTA | + |
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Preference number: 4 (lower is better) Translates to: RYTRYTGGVFSSLIPSGIKSSDS*SIYHLL Trigger: TAACAGGTGATATATGGATCAAGAATCACTGCTCTT...AATGCCACTGGGTATCAGGCTAGAGAATACACCTCCAGTGTACCTGGTATACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS-3UTR GCA 90 bp | TGCACATCTCTCTCCAACTCTGCCTTTAGTGATATGTCAATAACAAATTGGCCAGTTGGGAGCCATCTTTaGACATCTCTCTCCAACTCT | + |
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Preference number: 4 (lower is better) Translates to: CTSLSNSAFSDMSITNWPVGSHL*TSLSNS Trigger: AGAGTTGGAGAGAGATGTGCAAAGATGGCTCCCAAC...TGGCCAATTTGTTATTGACATATCACTAAAGGCAGAGTTGGAGAGAGATGTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS-3UTR CCA 90 bp | AGGTATACCAGGTACACTGGAGGTGTATTCTCTAGCCTGATACCCAGTGGCATTAGGGATTACTTACTGTaGAATTGCATTTCAAACTGG | + |
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Preference number: 4 (lower is better) Translates to: RYTRYTGGVFSSLIPSGIRDYLL*NCISNW Trigger: CCAGTTTGAAATGCAATTCCACAGTAAGTAATCCCT...AATGCCACTGGGTATCAGGCTAGAGAATACACCTCCAGTGTACCTGGTATACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS-3UTR TCA 90 bp | ATGGAAAGTGATAAATGCAGCAAATCAAGGAATTCCCCTCCTGTTGTCCCCTCACCTAATCTGGTAATCTaGAATTTCACATGCTCCGAA | + |
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Preference number: 4 (lower is better) Translates to: MESDKCSKSRNSPPVVPSPNLVI*NFTCSE Trigger: TTCGGAGCATGTGAAATTTCAGATTACCAGATTAGG...TGAGGGGACAACAGGAGGGGAATTCCTTGATTTGCTGCATTTATCACTTTCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS-3UTR CCA 90 bp | TGCACATCTCTCTCCAACTCTGCCTTTAGTGATATGTCAATAACAAATTGGCCAGTGGTATCTTCTAGTTaGGAGCCATCTTTGCACATC | + |
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Preference number: 4 (lower is better) Translates to: CTSLSNSAFSDMSITNWPVVSSS*EPSLHI Trigger: GATGTGCAAAGATGGCTCCCAACTAGAAGATACCAC...TGGCCAATTTGTTATTGACATATCACTAAAGGCAGAGTTGGAGAGAGATGTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS-3UTR CCA 90 bp | AATAAAGCTAAGATGAAGCTTAACGTGAGGGATTACTTACTGTGGAATTGCATTGCAGCTTCTAACTCCTaGGCTCAAGCTGTCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NKAKMKLNVRDYLLWNCIAASNS*AQAVFL Trigger: CAGGAAGACAGCTTGAGCCCAGGAGTTAGAAGCTGC...AATGCAATTCCACAGTAAGTAATCCCTCACGTTAAGCTTCATCTTAGCTTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS-3UTR TCA 90 bp | TGTCCAACTTGGATCTTAATTATACTCTTAAGACTCCTGAGGTTAACTGGCTGGCAATATAAGGGGATTTaGATTAGGTGGCGTAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: CPTWILIILLRLLRLTGWQYKGI*IRWRNL Trigger: GAGGTTACGCCACCTAATTCAAATCCCCTTATATTG...CCAGCCAGTTAACCTCAGGAGTCTTAAGAGTATAATTAAGATCCAAGTTGGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522324.5 |
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| CDS-3UTR TCA 90 bp | AATAAAGCTAAGATGAAGCTTAACGTGAGGGATTACTTACTGTGGAATTGCATTGTGTATTCTCTAGCCTaGTACCCAGTGGCATTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NKAKMKLNVRDYLLWNCIVYSLA*YPVAFV Trigger: GACAAATGCCACTGGGTATCAGGCTAGAGAATACAC...AATGCAATTCCACAGTAAGTAATCCCTCACGTTAAGCTTCATCTTAGCTTTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS-3UTR GCA 90 bp | TGCACATCTCTCTCCAACTCTGCCTTTAGTGATATGTCAATAACAAATTGGCCATACTTACTGTGGAATTaGATTTCAAACTGGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CTSLSNSAFSDMSITNWPYLLWN*ISNWAE Trigger: CTCAGCCCAGTTTGAAATGCAATTCCACAGTAAGTA...TGGCCAATTTGTTATTGACATATCACTAAAGGCAGAGTTGGAGAGAGATGTGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS-3UTR CCA 90 bp | ATGGAAAGTGATAAATGCAGCAAATCAAGGAATTCCCCTCCTGTTGTCCCCTCAGAGTATTTTACACCATaGAAAGTGATAAATGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MESDKCSKSRNSPPVVPSEYFTP*KVINAA Trigger: TGCTGCATTTATCACTTTCCATGGTGTAAAATACTC...TGAGGGGACAACAGGAGGGGAATTCCTTGATTTGCTGCATTTATCACTTTCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS-3UTR CCA 90 bp | TGCACATCTCTCTCCAACTCTGCCTTTAGTGATATGTCAATAACAAATTGGCCAAGTCTTAAATACTTCTaGTCCCAAGCACTTCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: CTSLSNSAFSDMSITNWPSLKYF*SQALQI Trigger: TATCTGAAGTGCTTGGGACCAGAAGTATTTAAGACT...TGGCCAATTTGTTATTGACATATCACTAAAGGCAGAGTTGGAGAGAGATGTGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS-3UTR TCA 90 bp | AATAAAGCTAAGATGAAGCTTAACGTGAGGGATTACTTACTGTGGAATTGCATTGAACAGAGCCATGATTaGCAAAGTCAGAAGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NKAKMKLNVRDYLLWNCIEQSHD*QSQKLS Trigger: AGAAAGCTTCTGACTTTGTCAATCATGGCTCTGTTC...AATGCAATTCCACAGTAAGTAATCCCTCACGTTAAGCTTCATCTTAGCTTTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS-3UTR GCA 90 bp | AATAAAGCTAAGATGAAGCTTAACGTGAGGGATTACTTACTGTGGAATTGCATTATTCTCAGGAAGGAGTaGTTTGTTAAGAACAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NKAKMKLNVRDYLLWNCIILRKE*FVKNRA Trigger: GGCTCTGTTCTTAACAAAGCACTCCTTCCTGAGAAT...AATGCAATTCCACAGTAAGTAATCCCTCACGTTAAGCTTCATCTTAGCTTTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS-3UTR CCA 90 bp | AATAAAGCTAAGATGAAGCTTAACGTGAGGGATTACTTACTGTGGAATTGCATTTTTGGAGATAAGAGATaGAGACTTACAGGCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NKAKMKLNVRDYLLWNCIFGDKR*RLTGWV Trigger: AACCCAGCCTGTAAGTCTCCATCTCTTATCTCCAAA...AATGCAATTCCACAGTAAGTAATCCCTCACGTTAAGCTTCATCTTAGCTTTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR CAA 72 bp | ACTTCAGATAAAGGATACTCAATTTGTATTCCTATTTaGGAGATAAGAGATGGAGACTTACAGGCTGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TSDKGYSICIPI*EIRDGDLQAGL Trigger: CAACCCAGCCTGTAAGTCTCCATCTCTTATCTCCAAAATAGGAATACAAATTGAGTATCCTTTATCTGAAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS-3UTR TCA 90 bp | AATAAAGCTAAGATGAAGCTTAACGTGAGGGATTACTTACTGTGGAATTGCATTTTAAGAACAGAGCCATaGTTGACAAAGTCAGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NKAKMKLNVRDYLLWNCILRTEP*LTKSEA Trigger: AGCTTCTGACTTTGTCAATCATGGCTCTGTTCTTAA...AATGCAATTCCACAGTAAGTAATCCCTCACGTTAAGCTTCATCTTAGCTTTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS-3UTR CCA 90 bp | AATAAAGCTAAGATGAAGCTTAACGTGAGGGATTACTTACTGTGGAATTGCATTGTTGATTACAGAAAGTaGTATCTTCTAGTTGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NKAKMKLNVRDYLLWNCIVDYRK*YLLVGS Trigger: GCTCCCAACTAGAAGATACCACTTTCTGTAATCAAC...AATGCAATTCCACAGTAAGTAATCCCTCACGTTAAGCTTCATCTTAGCTTTATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| 3UTR CAA 72 bp | GAAGAACCTTGTTATAGTAGACAGTCCTTTCTAGGTTaGTGTCCAACTTGGATCTTAATTATACTCTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EEPCYSRQSFLG*CPTWILIILLR Trigger: TCTTAAGAGTATAATTAAGATCCAAGTTGGACACAAACCTAGAAAGGACTGTCTACTATAACAAGGTTCTTC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522324.5 |
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| CDS-3UTR GCA 90 bp | AATAAAGCTAAGATGAAGCTTAACGTGAGGGATTACTTACTGTGGAATTGCATTATGGAAAGTGATAAATaGAGCAAATCAAGGAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: NKAKMKLNVRDYLLWNCIMESDK*SKSRNS Trigger: GGAATTCCTTGATTTGCTGCATTTATCACTTTCCAT...AATGCAATTCCACAGTAAGTAATCCCTCACGTTAAGCTTCATCTTAGCTTTATT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS GCA 90 bp | GCGCAGCGCGGCCTGGGCGCCCGGCTGCCTCCTAGGCTTCCGCACTaGCCGCGGCAGTGTGGGGACCCGAGACCCGGTGGCGTGGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: AQRGLGARLPPRLPH*PRQCGDPRPGGVGG Trigger: CCCACCCACGCCACCGGGTCTCGGGTCCCCACACTGCCGCGGGCAGTGCGGAAGCCTAGGAGGCAGCCGGGCGCCCAGGCCGCGCTGCGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520955.5 |
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| CDS GCA 90 bp | GTGGCTGCTCCGGCTGCTCCGCGCAGCGCGGCCTGGGCGCCCGGCTaGCTCCTAGGCTTCCGCACTGCCCGCGGCAGTGTGGGGACCCGA | + |
|
Preference number: 5 (lower is better) Translates to: VAAPAAPRSAAWAPG*LLGFRTARGSVGTR Trigger: TCGGGTCCCCACACTGCCGCGGGCAGTGCGGAAGCCTAGGAGGCAGCCGGGCGCCCAGGCCGCGCTGCGCGGAGCAGCCGGAGCAGCCAC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520955.5 |
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| CDS GCA 90 bp | AGGCCGGGTGGGCCTGGCCTTAACTGGGGAGGTGGCTGCTCCGGCTaGTCCGCGCAGCGCGGCCTGGGCGCCCGGCTGCCTCCTAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RPGGPGLNWGGGCSG*SAQRGLGARLPPRL Trigger: AAGCCTAGGAGGCAGCCGGGCGCCCAGGCCGCGCTGCGCGGAGCAGCCGGAGCAGCCACCTCCCCAGTTAAGGCCAGGCCCACCCGGCCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520955.5 |
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| CDS GCA 90 bp | AAAAGGCCCAGGCCGGGTGGGCCTGGCCTTAACTGGGGAGGTGGCTaGTCCGGCTGCTCCGCGCAGCGCGGCCTGGGCGCCCGGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: KRPRPGGPGLNWGGG*SGCSAQRGLGARLP Trigger: AGGCAGCCGGGCGCCCAGGCCGCGCTGCGCGGAGCAGCCGGAGCAGCCACCTCCCCAGTTAAGGCCAGGCCCACCCGGCCTGGGCCTTTT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520955.5 |
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| CDS CCA 90 bp | TTAACTGGGGAGGTGGCTGCTCCGGCTGCTCCGCGCAGCGCGGCCTaGGCGCCCGGCTGCCTCCTAGGCTTCCGCACTGCCCGCGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LTGEVAAPAAPRSAA*APGCLLGFRTARGS Trigger: ACTGCCGCGGGCAGTGCGGAAGCCTAGGAGGCAGCCGGGCGCCCAGGCCGCGCTGCGCGGAGCAGCCGGAGCAGCCACCTCCCCAGTTAA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520955.5 |
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| CDS CCA 90 bp | TGTAGGCACAGGAAAAGGCCCAGGCCGGGTGGGCCTGGCCTTAACTaGGGAGGTGGCTGCTCCGGCTGCTCCGCGCAGCGCGGCCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CRHRKRPRPGGPGLN*GGGCSGCSAQRGLG Trigger: GCCCAGGCCGCGCTGCGCGGAGCAGCCGGAGCAGCCACCTCCCCAGTTAAGGCCAGGCCCACCCGGCCTGGGCCTTTTCCTGTGCCTACA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520955.5 |
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| CDS CCA 90 bp | CGTGCAGCCTCCCACTCAGGGTCGGAATTCGGCGCAGAGGCCCCATaGACAGAGGCTTCCACTTCCCTCACCCCAGCCCTCCAGTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RAASHSGSEFGAEAP*TEASTSLTPALQCG Trigger: CCCACACTGGAGGGCTGGGGTGAGGGAAGTGGAAGCCTCTGTCCATGGGGCCTCTGCGCCGAATTCCGACCCTGAGTGGGAGGCTGCACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520955.5 |
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| CDS-3UTR CAA 90 bp | AGGTATACCAGGTACACTGGAGGTGTATTCTCTAGCCTGATACCCAGTGGCATTGGAATTCCCCTCCTGTaGTCCCCTCAGAAAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RYTRYTGGVFSSLIPSGIGIPLL*SPQKAS Trigger: GCTGGCTTTCTGAGGGGACAACAGGAGGGGAATTCC...AATGCCACTGGGTATCAGGCTAGAGAATACACCTCCAGTGTACCTGGTATACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS CCA 90 bp | CCACGTGTTTCTTATTGTCTAGCACCTCAGCCAGGCTTCTTTCCATaGTTTCAGAGTTCCAAAACAGTGGAGCAGGACAAGTCAACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PRVSYCLAPQPGFFP*FQSSKTVEQDKSTA Trigger: TGCAGTTGACTTGTCCTGCTCCACTGTTTTGGAACTCTGAAACCATGGAAAGAAGCCTGGCTGAGGTGCTAGACAATAAGAAACACGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523475.5 |
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| CDS-3UTR CAA 90 bp | ATGGAAAGTGATAAATGCAGCAAATCAAGGAATTCCCCTCCTGTTGTCCCCTCATACAGGCTGGGTTGGTaGGATTGGTTGCCTGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: MESDKCSKSRNSPPVVPSYRLGW*DWLPVF Trigger: AAAAACAGGCAACCAATCCAACCAACCCAGCCTGTA...TGAGGGGACAACAGGAGGGGAATTCCTTGATTTGCTGCATTTATCACTTTCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS-3UTR CAA 90 bp | TGCACATCTCTCTCCAACTCTGCCTTTAGTGATATGTCAATAACAAATTGGCCATTAAGAGTCAGAGTCTaGTTCTGCTGGCCAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CTSLSNSAFSDMSITNWPLRVRV*FCWPGW Trigger: CCAGCCTGGCCAGCAGAACAAGACTCTGACTCTTAA...TGGCCAATTTGTTATTGACATATCACTAAAGGCAGAGTTGGAGAGAGATGTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS-3UTR CAA 90 bp | TGCACATCTCTCTCCAACTCTGCCTTTAGTGATATGTCAATAACAAATTGGCCAAGTTGGGAGCCATCTTaGCACATCTCTCTCCAACTC | + |
|
Preference number: 5 (lower is better) Translates to: CTSLSNSAFSDMSITNWPSWEPS*HISLQL Trigger: GAGTTGGAGAGAGATGTGCAAAGATGGCTCCCAACT...TGGCCAATTTGTTATTGACATATCACTAAAGGCAGAGTTGGAGAGAGATGTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS-3UTR CAA 90 bp | TGCACATCTCTCTCCAACTCTGCCTTTAGTGATATGTCAATAACAAATTGGCCAAGCAATCCTCACTCCTaGGTCTCCCAGAATGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CTSLSNSAFSDMSITNWPSNPHS*VSQNVL Trigger: CAACACATTCTGGGAGACCAAGGAGTGAGGATTGCT...TGGCCAATTTGTTATTGACATATCACTAAAGGCAGAGTTGGAGAGAGATGTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS-3UTR CAA 90 bp | AGGTATACCAGGTACACTGGAGGTGTATTCTCTAGCCTGATACCCAGTGGCATTAAAATCACAAACTTTTaGAGTGCCAACATGATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RYTRYTGGVFSSLIPSGIKITNF*SANMML Trigger: GAGCATCATGTTGGCACTCAAAAAGTTTGTGATTTT...AATGCCACTGGGTATCAGGCTAGAGAATACACCTCCAGTGTACCTGGTATACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS-3UTR CAA 90 bp | ATGGAAAGTGATAAATGCAGCAAATCAAGGAATTCCCCTCCTGTTGTCCCCTCAACCTGTATAATAGTCTaGAATTTGCCTAAACCCACG | + |
|
Preference number: 5 (lower is better) Translates to: MESDKCSKSRNSPPVVPSTCIIV*NLPKPT Trigger: CGTGGGTTTAGGCAAATTCAAGACTATTATACAGGT...TGAGGGGACAACAGGAGGGGAATTCCTTGATTTGCTGCATTTATCACTTTCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS-3UTR CAA 90 bp | AATAAAGCTAAGATGAAGCTTAACGTGAGGGATTACTTACTGTGGAATTGCATTGACTTACAGGCTGGGTaGGTTGGATTGGTTGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: NKAKMKLNVRDYLLWNCIDLQAG*VGLVAC Trigger: ACAGGCAACCAATCCAACCAACCCAGCCTGTAAGTC...AATGCAATTCCACAGTAAGTAATCCCTCACGTTAAGCTTCATCTTAGCTTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS CCA 90 bp | AGATTACAAGTGAAAGTTTCCACGGTTCCTTCATCCACTACTTCATaGCTCATTCATAACAATGACACTGTGATCTCACTCCATACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RLQVKVSTVPSSTTS*LIHNNDTVISLHTS Trigger: AGAGGTATGGAGTGAGATCACAGTGTCATTGTTATGAATGAGCCATGAAGTAGTGGATGAAGGAACCGTGGAAACTTTCACTTGTAATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523577.5 |
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| CDS-3UTR CAA 90 bp | ATGGAAAGTGATAAATGCAGCAAATCAAGGAATTCCCCTCCTGTTGTCCCCTCAAGTACTGAAACAACTTaGTCACTTAGGACTATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: MESDKCSKSRNSPPVVPSSTETT*SLRTIL Trigger: GAGAATAGTCCTAAGTGACAAAGTTGTTTCAGTACT...TGAGGGGACAACAGGAGGGGAATTCCTTGATTTGCTGCATTTATCACTTTCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS-3UTR CAA 90 bp | ATGGAAAGTGATAAATGCAGCAAATCAAGGAATTCCCCTCCTGTTGTCCCCTCAAATGCTCAAGAGAAGTaGCTATTTAGTAAGCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: MESDKCSKSRNSPPVVPSNAQEK*LFSKQQ Trigger: TTGCTGCTTACTAAATAGCAACTTCTCTTGAGCATT...TGAGGGGACAACAGGAGGGGAATTCCTTGATTTGCTGCATTTATCACTTTCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518322.6 |
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| CDS-3UTR CAA 90 bp | TGTCCAACTTGGATCTTAATTATACTCTTAAGACTCCTGAGGTTAACTGGCTGGCAGTCCTTTCTAGGTTaGTGTCCAACTTGGATCTTA | + |
|
Preference number: 5 (lower is better) Translates to: CPTWILIILLRLLRLTGWQSFLG*CPTWIL Trigger: TAAGATCCAAGTTGGACACAAACCTAGAAAGGACTG...CCAGCCAGTTAACCTCAGGAGTCTTAAGAGTATAATTAAGATCCAAGTTGGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522324.5 |
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| CDS GCA 72 bp | CCGGCTGCTCCGCGCAGCGCGGCCTGGGCGCCCGGCTaGCTCCTAGGCTTCCGCACTGCCCGCGGCAGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PAAPRSAAWAPG*LLGFRTARGSV Trigger: CACACTGCCGCGGGCAGTGCGGAAGCCTAGGAGGCAGCCGGGCGCCCAGGCCGCGCTGCGCGGAGCAGCCGG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520955.5 |
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| CDS GCA 72 bp | CCCAAGGAATTAGGCCCCAGGTCACAGCGGGGACCGTaGAGCCTCCCACTCAGGGTCGGAATTCGGCGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PKELGPRSQRGP*SLPLRVGIRRR Trigger: TCTGCGCCGAATTCCGACCCTGAGTGGGAGGCTGCACGGTCCCCGCTGTGACCTGGGGCCTAATTCCTTGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520955.5 |
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| CDS GCA 72 bp | AAAGGGCATAGCTCTCTAGATCAGGGTTTGGCAAGTTaGGGCCCAGCCAGCCTCCTGTCCTGTTCCAGATAC | + |
|
Preference number: 6 (lower is better) Translates to: KGHSSLDQGLAS*GPASLLSCSRY Trigger: GTATCTGGAACAGGACAGGAGGCTGGCTGGGCCGCAACTTGCCAAACCCTGATCTAGAGAGCTATGCCCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452913.6 |
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| CDS CAA 90 bp | TGTCACGGCATTGGCAGGTCGTCAGCAGGGGCCACGTGTTTCTTATaGTCTAGCACCTCAGCCAGGCTTCTTTCCATGGTTTCAGAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: CHGIGRSSAGATCFL*SSTSARLLSMVSEF Trigger: GAACTCTGAAACCATGGAAAGAAGCCTGGCTGAGGTGCTAGACAATAAGAAACACGTGGCCCCTGCTGACGACCTGCCAATGCCGTGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523475.5 |
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| CDS CCA 72 bp | GCCCCAAATCGCTGCTCAAGAGACTCCCCTCAGGAATaGAGGTGTTCTGGAACCTCAAATGCTCTCAAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: APNRCSRDSPQE*RCSGTSNALKE Trigger: CTCTTTGAGAGCATTTGAGGTTCCAGAACACCTCCATTCCTGAGGGGAGTCTCTTGAGCAGCGATTTGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000517718.5 ENST00000521641.5 |
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| CDS CCA 72 bp | GATGATCTAAGAGGCCTCACTTCTGTGTCACGGCATTaGCAGGTCGTCAGCAGGGGCCACGTGTTTCTTATT | + |
|
Preference number: 6 (lower is better) Translates to: DDLRGLTSVSRH*QVVSRGHVFLI Trigger: AATAAGAAACACGTGGCCCCTGCTGACGACCTGCCAATGCCGTGACACAGAAGTGAGGCCTCTTAGATCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523475.5 |
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| CDS CCA 72 bp | GCAGTTGTTTCGTTTGAGCGTTCCTTTCTGGTCAGCTaGCGGCTGGATGATCTAAGAGGCCTCACTTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: AVVSFERSFLVS*RLDDLRGLTSV Trigger: CACAGAAGTGAGGCCTCTTAGATCATCCAGCCGCCAGCTGACCAGAAAGGAACGCTCAAACGAAACAACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523475.5 |
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| CDS CAA 72 bp | ATTGGCAGGTCGTCAGCAGGGGCCACGTGTTTCTTATaGTCTAGCACCTCAGCCAGGCTTCTTTCCATGGTT | + |
|
Preference number: 6 (lower is better) Translates to: IGRSSAGATCFL*SSTSARLLSMV Trigger: AACCATGGAAAGAAGCCTGGCTGAGGTGCTAGACAATAAGAAACACGTGGCCCCTGCTGACGACCTGCCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523475.5 |
||
| CDS CCA 72 bp | CAGGCTTCTTTCCATGGTTTCAGAGTTCCAAAACAGTaGAGCAGGACAAGTCAACTGCACAAGTGCCTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: QASFHGFRVPKQ*SRTSQLHKCLS Trigger: TGAAAGGCACTTGTGCAGTTGACTTGTCCTGCTCCACTGTTTTGGAACTCTGAAACCATGGAAAGAAGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523475.5 |
||
| CDS CCA 72 bp | TCTTATTGTCTAGCACCTCAGCCAGGCTTCTTTCCATaGTTTCAGAGTTCCAAAACAGTGGAGCAGGACAAG | + |
|
Preference number: 6 (lower is better) Translates to: SYCLAPQPGFFP*FQSSKTVEQDK Trigger: CTTGTCCTGCTCCACTGTTTTGGAACTCTGAAACCATGGAAAGAAGCCTGGCTGAGGTGCTAGACAATAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523475.5 |
||
| CDS CCA 72 bp | AACAGCCACCCCTTGGCCAAAAGTTGGCAAATAAAGTaGGGAAATTCAAGACCTCAAGATGCCCTAAAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: NSHPLAKSWQIK*GNSRPQDALKV Trigger: AACCTTTAGGGCATCTTGAGGTCTTGAATTTCCCCACTTTATTTGCCAACTTTTGGCCAAGGGGTGGCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523577.5 |
||
| CDS TCA 72 bp | CCACTACTTCATGGCTCATTCATAACAATGACACTGTaGTCTCACTCCATACCTCTGCTTGTCGATAATCCT | + |
|
Preference number: 6 (lower is better) Translates to: PLLHGSFITMTL*SHSIPLLVDNP Trigger: AGGATTATCGACAAGCAGAGGTATGGAGTGAGATCACAGTGTCATTGTTATGAATGAGCCATGAAGTAGTGG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523577.5 |
||
| CDS CAA 72 bp | CTACCCAGAGCAAAAAGTCCACACGGTGTCTCAGTATaGGTTTGCTTCCATGATACAATTCATAGCATTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LPRAKSPHGVSV*VCFHDTIHSIL Trigger: CAAAATGCTATGAATTGTATCATGGAAGCAAACCAATACTGAGACACCGTGTGGACTTTTTGCTCTGGGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000523577.5 |
||
| CDS CAA 90 bp | TTAATAGACTCACACAGTCTTATGAAAATGTACGTTTTATCAAGTTaGCATCCACCTCTGCAGTTAGGTAGATTACAAGTGAAAGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LIDSHSLMKMYVLSS*HPPLQLGRLQVKVS Trigger: GGAAACTTTCACTTGTAATCTACCTAACTGCAGAGGTGGATGCAAACTTGATAAAACGTACATTTTCATAAGACTGTGTGAGTCTATTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523577.5 |
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| CDS CAA 90 bp | TCAGTATTGGTTTGCTTCCATGATACAATTCATAGCATTTTGTTGTaGTTAGTAAACCATTGGTCAATTTTCCAAACCATGGATGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: SVLVCFHDTIHSILL*LVNHWSIFQTMDAA Trigger: TGCTGCATCCATGGTTTGGAAAATTGACCAATGGTTTACTAACAACAACAAAATGCTATGAATTGTATCATGGAAGCAAACCAATACTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523577.5 |
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| CDS CAA 90 bp | GTCTCAGTATTGGTTTGCTTCCATGATACAATTCATAGCATTTTGTaGTTGTTAGTAAACCATTGGTCAATTTTCCAAACCATGGATGCA | + |
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Preference number: 6 (lower is better) Translates to: VSVLVCFHDTIHSIL*LLVNHWSIFQTMDA Trigger: TGCATCCATGGTTTGGAAAATTGACCAATGGTTTACTAACAACAACAAAATGCTATGAATTGTATCATGGAAGCAAACCAATACTGAGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523577.5 |
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| CDS CAA 90 bp | GGTGTCTCAGTATTGGTTTGCTTCCATGATACAATTCATAGCATTTaGTTGTTGTTAGTAAACCATTGGTCAATTTTCCAAACCATGGAT | + |
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Preference number: 6 (lower is better) Translates to: GVSVLVCFHDTIHSI*LLLVNHWSIFQTMD Trigger: ATCCATGGTTTGGAAAATTGACCAATGGTTTACTAACAACAACAAAATGCTATGAATTGTATCATGGAAGCAAACCAATACTGAGACACC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523577.5 |
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