Pregenerated sensors for CIB4 (Homo sapiens)
Ensembl gene IDs: ENSG00000157884Ensembl transcript IDs: ENST00000288861.5, ENST00000403670.7, ENST00000405346.3
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGTGGGCCCAGTACAAAGTCATACTTCAAACCAGCTCCCTCCAGTaGTGGAGGGGGTTCGATTCCTGTGGTCTCCCTCGAGGCTGCCAT | + |
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Preference number: 1 (lower is better) Translates to: VWAQYKVILQTSSLQ*WRGFDSCGLPRGCH Trigger: ATGGCAGCCTCGAGGGAGACCACAGGAATCGAACCCCCTCCAGCACTGGAGGGAGCTGGTTTGAAGTATGACTTTGTACTGGGCCCACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| 3UTR CCA 90 bp | TGGGCCCAGTACAAAGTCATACTTCAAACCAGCTCCCTCCAGTGCTaGAGGGGGTTCGATTCCTGTGGTCTCCCTCGAGGCTGCCATGTC | + |
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Preference number: 1 (lower is better) Translates to: WAQYKVILQTSSLQC*RGFDSCGLPRGCHV Trigger: GACATGGCAGCCTCGAGGGAGACCACAGGAATCGAACCCCCTCCAGCACTGGAGGGAGCTGGTTTGAAGTATGACTTTGTACTGGGCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| 3UTR CCA 72 bp | CAGCTCCCTCCAGTGCTGGAGGGGGTTCGATTCCTGTaGTCTCCCTCGAGGCTGCCATGTCAGGTGTTTGCC | + |
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Preference number: 3 (lower is better) Translates to: QLPPVLEGVRFL*SPSRLPCQVFA Trigger: GGCAAACACCTGACATGGCAGCCTCGAGGGAGACCACAGGAATCGAACCCCCTCCAGCACTGGAGGGAGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| 3UTR CCA 72 bp | TACAAAGTCATACTTCAAACCAGCTCCCTCCAGTGCTaGAGGGGGTTCGATTCCTGTGGTCTCCCTCGAGGC | + |
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Preference number: 3 (lower is better) Translates to: YKVILQTSSLQC*RGFDSCGLPRG Trigger: GCCTCGAGGGAGACCACAGGAATCGAACCCCCTCCAGCACTGGAGGGAGCTGGTTTGAAGTATGACTTTGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| 3UTR GCA 72 bp | CAGTACAAAGTCATACTTCAAACCAGCTCCCTCCAGTaGTGGAGGGGGTTCGATTCCTGTGGTCTCCCTCGA | + |
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Preference number: 3 (lower is better) Translates to: QYKVILQTSSLQ*WRGFDSCGLPR Trigger: TCGAGGGAGACCACAGGAATCGAACCCCCTCCAGCACTGGAGGGAGCTGGTTTGAAGTATGACTTTGTACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS-3UTR TCA 90 bp | CTCCCTCCAGTGCTGGAGGGGGTTCGATTCCTGTGGTCTCCCTCGAGGCTGCCAGGCAGGCCTGCTCGCTaGACACAGATGCCATGCCCA | + |
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Preference number: 4 (lower is better) Translates to: LPPVLEGVRFLWSPSRLPGRPAR*TQMPCP Trigger: TGGGCATGGCATCTGTGTTCAGCGAGCAGGCCTGCC...TGGCAGCCTCGAGGGAGACCACAGGAATCGAACCCCCTCCAGCACTGGAGGGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS-3UTR CCA 90 bp | AGTGCTGGAGGGGGTTCGATTCCTGTGGTCTCCCTCGAGGCTGCCATGTCAGGTGGCAGGGAGCTGACCTaGTCCATGGTGAGCGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: SAGGGSIPVVSLEAAMSGGRELT*SMVSVA Trigger: GGCAACGCTCACCATGGACCAGGTCAGCTCCCTGCC...ACCTGACATGGCAGCCTCGAGGGAGACCACAGGAATCGAACCCCCTCCAGCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS-3UTR CCA 90 bp | CTCCAGTGCTGGAGGGGGTTCGATTCCTGTGGTCTCCCTCGAGGCTGCCATGTCGGGGTTCGATTCCTGTaGTCTCCCTCGAGGCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: LQCWRGFDSCGLPRGCHVGVRFL*SPSRLP Trigger: TGGCAGCCTCGAGGGAGACCACAGGAATCGAACCCC...GACATGGCAGCCTCGAGGGAGACCACAGGAATCGAACCCCCTCCAGCACTGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS-3UTR TCA 90 bp | TCCCTCCAGTGCTGGAGGGGGTTCGATTCCTGTGGTCTCCCTCGAGGCTGCCATTCCTCCCAGTGCATCTaGTACCTCAAGCATTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: SLQCWRGFDSCGLPRGCHSSQCI*YLKHCP Trigger: GGGGCAATGCTTGAGGTATCAGATGCACTGGGAGGA...ATGGCAGCCTCGAGGGAGACCACAGGAATCGAACCCCCTCCAGCACTGGAGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS-3UTR GCA 90 bp | AACCAGCTCCCTCCAGTGCTGGAGGGGGTTCGATTCCTGTGGTCTCCCTCGAGGCTCGCTGAACACAGATaGCATGCCCAGCACATCCTC | + |
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Preference number: 4 (lower is better) Translates to: NQLPPVLEGVRFLWSPSRLAEHR*HAQHIL Trigger: GAGGATGTGCTGGGCATGGCATCTGTGTTCAGCGAG...CCTCGAGGGAGACCACAGGAATCGAACCCCCTCCAGCACTGGAGGGAGCTGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS-3UTR GCA 90 bp | CTCCCTCCAGTGCTGGAGGGGGTTCGATTCCTGTGGTCTCCCTCGAGGCTGCCATCAAGCATTGCCCCATaGCAACCACACCTTTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: LPPVLEGVRFLWSPSRLPSSIAP*QPHLSV Trigger: GACAGAAAGGTGTGGTTGGCATGGGGCAATGCTTGA...TGGCAGCCTCGAGGGAGACCACAGGAATCGAACCCCCTCCAGCACTGGAGGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS-3UTR GCA 90 bp | TCCCTCCAGTGCTGGAGGGGGTTCGATTCCTGTGGTCTCCCTCGAGGCTGCCATGTCCATGGTGAGCGTTaGCTCCTTGTAGTACTTCCC | + |
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Preference number: 4 (lower is better) Translates to: SLQCWRGFDSCGLPRGCHVHGER*LLVVLP Trigger: GGGAAGTACTACAAGGAGGCAACGCTCACCATGGAC...ATGGCAGCCTCGAGGGAGACCACAGGAATCGAACCCCCTCCAGCACTGGAGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS-3UTR GCA 90 bp | TACTTCAAACCAGCTCCCTCCAGTGCTGGAGGGGGTTCGATTCCTGTGGTCTCCGGTCTCCCTCGAGGCTaGCATGTCAGGTGTTTGCCG | + |
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Preference number: 4 (lower is better) Translates to: YFKPAPSSAGGGSIPVVSGLPRG*HVRCLP Trigger: CGGCAAACACCTGACATGGCAGCCTCGAGGGAGACC...GGAGACCACAGGAATCGAACCCCCTCCAGCACTGGAGGGAGCTGGTTTGAAGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS-3UTR TCA 90 bp | TACTTCAAACCAGCTCCCTCCAGTGCTGGAGGGGGTTCGATTCCTGTGGTCTCCTCAGGACGTGGTTCGTaGGGTCCATCAGGAGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: YFKPAPSSAGGGSIPVVSSGRGS*GPSGGP Trigger: AGGACCTCCTGATGGACCTCACGAACCACGTCCTGA...GGAGACCACAGGAATCGAACCCCCTCCAGCACTGGAGGGAGCTGGTTTGAAGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS-3UTR TCA 90 bp | TACTTCAAACCAGCTCCCTCCAGTGCTGGAGGGGGTTCGATTCCTGTGGTCTCCTCAGCAGTCGCAGGATaGTCCTCTGCAGATCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: YFKPAPSSAGGGSIPVVSSAVAG*SSADPP Trigger: AGGAGGATCTGCAGAGGATCATCCTGCGACTGCTGA...GGAGACCACAGGAATCGAACCCCCTCCAGCACTGGAGGGAGCTGGTTTGAAGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS-3UTR GCA 90 bp | GAGGTGAGTGTGGGCCCAGTACAAAGTCATACTTCAAACCAGCTCCCTCCAGTGAGGCTTGGGCAGGCCTaGTCGCTGAACACAGATGCC | + |
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Preference number: 4 (lower is better) Translates to: EVSVGPVQSHTSNQLPPVRLGQA*SLNTDA Trigger: GGCATCTGTGTTCAGCGAGCAGGCCTGCCCAAGCCT...CACTGGAGGGAGCTGGTTTGAAGTATGACTTTGTACTGGGCCCACACTCACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS-3UTR CCA 90 bp | ACAAAGTCATACTTCAAACCAGCTCCCTCCAGTGCTGGAGGGGGTTCGATTCCTGTTGACCCGCAGAGCTaGCAGGGAGCTGACCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: TKSYFKPAPSSAGGGSIPVDPQS*QGADLV Trigger: GACCAGGTCAGCTCCCTGCCAGCTCTGCGGGTCAAC...AGGAATCGAACCCCCTCCAGCACTGGAGGGAGCTGGTTTGAAGTATGACTTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS-3UTR CCA 90 bp | GGGCCCAGTACAAAGTCATACTTCAAACCAGCTCCCTCCAGTGCTGGAGGGGGTCTCAATCTTCAGGCTTaGGCAGGCCTGCTCGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: GPSTKSYFKPAPSSAGGGLNLQA*AGLLAE Trigger: TTCAGCGAGCAGGCCTGCCCAAGCCTGAAGATTGAG...ACCCCCTCCAGCACTGGAGGGAGCTGGTTTGAAGTATGACTTTGTACTGGGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS-3UTR GCA 90 bp | TCATACTTCAAACCAGCTCCCTCCAGTGCTGGAGGGGGTTCGATTCCTGTGGTCGCCATGTCAGGTGTTTaGCGCTACATCAGCATCCCC | + |
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Preference number: 4 (lower is better) Translates to: SYFKPAPSSAGGGSIPVVAMSGV*RYISIP Trigger: GGGGATGCTGATGTAGCGGCAAACACCTGACATGGC...GACCACAGGAATCGAACCCCCTCCAGCACTGGAGGGAGCTGGTTTGAAGTATGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS-3UTR GCA 90 bp | CAGTACAAAGTCATACTTCAAACCAGCTCCCTCCAGTGCTGGAGGGGGTTCGATACCAGCTCCCTCCAGTaGTGGAGGGGGTTCGATTCC | + |
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Preference number: 4 (lower is better) Translates to: QYKVILQTSSLQCWRGFDTSSLQ*WRGFDS Trigger: GGAATCGAACCCCCTCCAGCACTGGAGGGAGCTGGT...ATCGAACCCCCTCCAGCACTGGAGGGAGCTGGTTTGAAGTATGACTTTGTACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS-3UTR TCA 90 bp | GTGGGCCCAGTACAAAGTCATACTTCAAACCAGCTCCCTCCAGTGCTGGAGGGGCAGCATCCCCAGAAGTaGATCCGAAAGGAGTTCATG | + |
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Preference number: 4 (lower is better) Translates to: VGPVQSHTSNQLPPVLEGQHPQK*IRKEFM Trigger: CATGAACTCCTTTCGGATTCACTTCTGGGGATGCTG...CCCCTCCAGCACTGGAGGGAGCTGGTTTGAAGTATGACTTTGTACTGGGCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS-3UTR CCA 90 bp | CCAGTACAAAGTCATACTTCAAACCAGCTCCCTCCAGTGCTGGAGGGGGTTCGAGACTCACTCAGGACGTaGTTCGTGAGGTCCATCAGG | + |
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Preference number: 4 (lower is better) Translates to: PVQSHTSNQLPPVLEGVRDSLRT*FVRSIR Trigger: CCTGATGGACCTCACGAACCACGTCCTGAGTGAGTC...TCGAACCCCCTCCAGCACTGGAGGGAGCTGGTTTGAAGTATGACTTTGTACTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS-3UTR CCA 90 bp | AGAGGTGAGTGTGGGCCCAGTACAAAGTCATACTTCAAACCAGCTCCCTCCAGTAGCTCCCTCCAGTGCTaGAGGGGGTTCGATTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: RGECGPSTKSYFKPAPSSSSLQC*RGFDSC Trigger: ACAGGAATCGAACCCCCTCCAGCACTGGAGGGAGCT...ACTGGAGGGAGCTGGTTTGAAGTATGACTTTGTACTGGGCCCACACTCACCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS-3UTR TCA 90 bp | GCCCAGTACAAAGTCATACTTCAAACCAGCTCCCTCCAGTGCTGGAGGGGGTTCTCCGAAAGGAGTTCATaGAATCTGGAGACTTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: AQYKVILQTSSLQCWRGFSERSS*NLETWP Trigger: TGGCCAAGTCTCCAGATTTCATGAACTCCTTTCGGA...GAACCCCCTCCAGCACTGGAGGGAGCTGGTTTGAAGTATGACTTTGTACTGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS-3UTR CCA 90 bp | GTGGGCCCAGTACAAAGTCATACTTCAAACCAGCTCCCTCCAGTGCTGGAGGGGACAGAATTTCATTTCTaGTCAGGAAGGTCAGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: VGPVQSHTSNQLPPVLEGTEFHF*SGRSGP Trigger: AGGCCCTGACCTTCCTGACCAGAAATGAAATTCTGT...CCCCTCCAGCACTGGAGGGAGCTGGTTTGAAGTATGACTTTGTACTGGGCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS-3UTR GCA 90 bp | ACAAAGTCATACTTCAAACCAGCTCCCTCCAGTGCTGGAGGGGGTTCGATTCCTCGCAGGATGATCCTCTaGAGATCCTCCTCATCAATG | + |
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Preference number: 4 (lower is better) Translates to: TKSYFKPAPSSAGGGSIPRRMIL*RSSSSM Trigger: CATTGATGAGGAGGATCTGCAGAGGATCATCCTGCG...AGGAATCGAACCCCCTCCAGCACTGGAGGGAGCTGGTTTGAAGTATGACTTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS-3UTR CCA 90 bp | AGTCATACTTCAAACCAGCTCCCTCCAGTGCTGGAGGGGGTTCGATTCCTGTGGGGAGTTCATGAAATCTaGAGACTTGGCCATTGCATG | + |
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Preference number: 4 (lower is better) Translates to: SHTSNQLPPVLEGVRFLWGVHEI*RLGHCM Trigger: CATGCAATGGCCAAGTCTCCAGATTTCATGAACTCC...CCACAGGAATCGAACCCCCTCCAGCACTGGAGGGAGCTGGTTTGAAGTATGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS-3UTR CCA 90 bp | GGGCCCAGTACAAAGTCATACTTCAAACCAGCTCCCTCCAGTGCTGGAGGGGGTTTCAGGAAGGTGTCATaGATGCACAGAATTTCATTT | + |
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Preference number: 4 (lower is better) Translates to: GPSTKSYFKPAPSSAGGGFRKVS*MHRISF Trigger: AAATGAAATTCTGTGCATCCATGACACCTTCCTGAA...ACCCCCTCCAGCACTGGAGGGAGCTGGTTTGAAGTATGACTTTGTACTGGGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS-3UTR GCA 90 bp | TACAAAGTCATACTTCAAACCAGCTCCCTCCAGTGCTGGAGGGGGTTCGATTCCGGAAGGTGTCATGGATaGACAGAATTTCATTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: YKVILQTSSLQCWRGFDSGRCHG*TEFHFW Trigger: CCAGAAATGAAATTCTGTGCATCCATGACACCTTCC...GGAATCGAACCCCCTCCAGCACTGGAGGGAGCTGGTTTGAAGTATGACTTTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS-3UTR CAA 90 bp | GGGGGTTCGATTCCTGTGGTCTCCCTCGAGGCTGCCATGTCAGGTGTTTGCCGCCGGTCTCTGAAAGGGTaGACCCGCAGAGCTGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: GGSIPVVSLEAAMSGVCRRSLKG*TRRAGR Trigger: CCTGCCAGCTCTGCGGGTCAACCCTTTCAGAGACCG...GCGGCAAACACCTGACATGGCAGCCTCGAGGGAGACCACAGGAATCGAACCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS GCA 90 bp | GACCCGCAGAGCTGGCAGGGAGCTGACCTGGTCCATGGTGAGCGTTaGCTCCTTGTAGTACTTCCCAGGAGGGCAGAGCTTCAGGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: DPQSWQGADLVHGER*LLVVLPRRAELQEG Trigger: ACCTTCCTGAAGCTCTGCCCTCCTGGGAAGTACTACAAGGAGGCAACGCTCACCATGGACCAGGTCAGCTCCCTGCCAGCTCTGCGGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS-3UTR CAA 90 bp | GGGGGTTCGATTCCTGTGGTCTCCCTCGAGGCTGCCATGTCAGGTGTTTGCCGCCTGATACCTCAAGCATaGCCCCATGCCAACCACACC | + |
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Preference number: 5 (lower is better) Translates to: GGSIPVVSLEAAMSGVCRLIPQA*PHANHT Trigger: GGTGTGGTTGGCATGGGGCAATGCTTGAGGTATCAG...GCGGCAAACACCTGACATGGCAGCCTCGAGGGAGACCACAGGAATCGAACCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS-3UTR CAA 90 bp | AGCTCCCTCCAGTGCTGGAGGGGGTTCGATTCCTGTGGTCTCCCTCGAGGCTGCAAGGAGAACATGCCTTaGTGGGAGAACACTCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: SSLQCWRGFDSCGLPRGCKENMP*WENTLQ Trigger: CTGCAGAGTGTTCTCCCACAAAGGCATGTTCTCCTT...GCAGCCTCGAGGGAGACCACAGGAATCGAACCCCCTCCAGCACTGGAGGGAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS-3UTR CAA 90 bp | AGCTCCCTCCAGTGCTGGAGGGGGTTCGATTCCTGTGGTCTCCCTCGAGGCTGCGAGAAGGACAGCATGTaGTCATTGTCCAGATCCGAC | + |
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Preference number: 5 (lower is better) Translates to: SSLQCWRGFDSCGLPRGCEKDSM*SLSRSD Trigger: GTCGGATCTGGACAATGACAACATGCTGTCCTTCTC...GCAGCCTCGAGGGAGACCACAGGAATCGAACCCCCTCCAGCACTGGAGGGAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS CCA 90 bp | ACTTCAAACCAGCTCCCTCCAGTGCTGGAGGGGGTTCGATTCCTGTaGTCTCCCTCGAGGCTGCCATGTCAGGTGTTTGCCGCTACATCA | + |
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Preference number: 5 (lower is better) Translates to: TSNQLPPVLEGVRFL*SPSRLPCQVFAATS Trigger: TGATGTAGCGGCAAACACCTGACATGGCAGCCTCGAGGGAGACCACAGGAATCGAACCCCCTCCAGCACTGGAGGGAGCTGGTTTGAAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000288861.5 ENST00000403670.7 |
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| CDS GCA 90 bp | GGTTCGATTCCTGTGGTCTCCCTCGAGGCTGCCATGTCAGGTGTTTaGCGCTACATCAGCATCCCCAGAAGTGAATCCGAAAGGAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: GSIPVVSLEAAMSGV*RYISIPRSESERSS Trigger: TGAACTCCTTTCGGATTCACTTCTGGGGATGCTGATGTAGCGGCAAACACCTGACATGGCAGCCTCGAGGGAGACCACAGGAATCGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000288861.5 ENST00000403670.7 |
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| CDS-3UTR CAA 90 bp | GGGCCCAGTACAAAGTCATACTTCAAACCAGCTCCCTCCAGTGCTGGAGGGGGTGACAGCATGTTGTCATaGTCCAGATCCGACTCACTC | + |
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Preference number: 5 (lower is better) Translates to: GPSTKSYFKPAPSSAGGGDSMLS*SRSDSL Trigger: GAGTGAGTCGGATCTGGACAATGACAACATGCTGTC...ACCCCCTCCAGCACTGGAGGGAGCTGGTTTGAAGTATGACTTTGTACTGGGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS-3UTR CAA 90 bp | GAGGTGAGTGTGGGCCCAGTACAAAGTCATACTTCAAACCAGCTCCCTCCAGTGTGCCATGTCAGGTGTTaGCCGCTACATCAGCATCCC | + |
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Preference number: 5 (lower is better) Translates to: EVSVGPVQSHTSNQLPPVCHVRC*PLHQHP Trigger: GGGATGCTGATGTAGCGGCAAACACCTGACATGGCA...CACTGGAGGGAGCTGGTTTGAAGTATGACTTTGTACTGGGCCCACACTCACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS GCA 90 bp | ATACTCAATCTTCAGGCTTGGGCAGGCCTGCTCGCTGAACACAGATaGCATGCCCAGCACATCCTCAAAGGAGAACATGCCTTTGTGGGA | + |
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Preference number: 5 (lower is better) Translates to: ILNLQAWAGLLAEHR*HAQHILKGEHAFVG Trigger: TCCCACAAAGGCATGTTCTCCTTTGAGGATGTGCTGGGCATGGCATCTGTGTTCAGCGAGCAGGCCTGCCCAAGCCTGAAGATTGAGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000288861.5 ENST00000403670.7 ENST00000405346.3 |
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| CDS CCA 90 bp | CTCATTAAAATCATAGATGCGAAAGGCATACTCAATCTTCAGGCTTaGGCAGGCCTGCTCGCTGAACACAGATGCCATGCCCAGCACATC | + |
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Preference number: 5 (lower is better) Translates to: LIKIIDAKGILNLQA*AGLLAEHRCHAQHI Trigger: GATGTGCTGGGCATGGCATCTGTGTTCAGCGAGCAGGCCTGCCCAAGCCTGAAGATTGAGTATGCCTTTCGCATCTATGATTTTAATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000288861.5 ENST00000403670.7 ENST00000405346.3 |
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| CDS-3UTR CAA 90 bp | CCAGTACAAAGTCATACTTCAAACCAGCTCCCTCCAGTGCTGGAGGGGGTTCGAATGAAATCTGGAGACTaGGCCATTGCATGTTCAAAC | + |
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Preference number: 5 (lower is better) Translates to: PVQSHTSNQLPPVLEGVRMKSGD*AIACSN Trigger: GTTTGAACATGCAATGGCCAAGTCTCCAGATTTCAT...TCGAACCCCCTCCAGCACTGGAGGGAGCTGGTTTGAAGTATGACTTTGTACTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS TCA 90 bp | GGAGTTCATGAAATCTGGAGACTTGGCCATTGCATGTTCAAACTCTaGGAAGGACAGCATGTTGTCATTGTCCAGATCCGACTCACTCAG | + |
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Preference number: 5 (lower is better) Translates to: GVHEIWRLGHCMFKL*EGQHVVIVQIRLTQ Trigger: CTGAGTGAGTCGGATCTGGACAATGACAACATGCTGTCCTTCTCAGAGTTTGAACATGCAATGGCCAAGTCTCCAGATTTCATGAACTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000288861.5 ENST00000403670.7 ENST00000405346.3 |
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| CDS CCA 90 bp | ATAGGAACTAGTTCTAAGCAGGACTCAGAAAGGCTCGGAAAACTTTaGGAGATACATAGAAACCGAGATGGAGCTGAAACCTTAGGGGCC | + |
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Preference number: 5 (lower is better) Translates to: IGTSSKQDSERLGKL*EIHRNRDGAETLGA Trigger: GGCCCCTAAGGTTTCAGCTCCATCTCGGTTTCTATGTATCTCCCAAAGTTTTCCGAGCCTTTCTGAGTCCTGCTTAGAACTAGTTCCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000405346.3 |
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| CDS GCA 72 bp | AGCTGGCAGGGAGCTGACCTGGTCCATGGTGAGCGTTaGCTCCTTGTAGTACTTCCCAGGAGGGCAGAGCTT | + |
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Preference number: 6 (lower is better) Translates to: SWQGADLVHGER*LLVVLPRRAEL Trigger: AAGCTCTGCCCTCCTGGGAAGTACTACAAGGAGGCAACGCTCACCATGGACCAGGTCAGCTCCCTGCCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS GCA 72 bp | TGGAGGGGGTTCGATTCCTGTGGTCTCCCTCGAGGCTaGCATGTCAGGTGTTTGCCGCTACATCAGCATCCC | + |
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Preference number: 6 (lower is better) Translates to: WRGFDSCGLPRG*HVRCLPLHQHP Trigger: GGGATGCTGATGTAGCGGCAAACACCTGACATGGCAGCCTCGAGGGAGACCACAGGAATCGAACCCCCTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000288861.5 ENST00000403670.7 |
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| CDS GCA 72 bp | CCTGTGGTCTCCCTCGAGGCTGCCATGTCAGGTGTTTaGCGCTACATCAGCATCCCCAGAAGTGAATCCGAA | + |
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Preference number: 6 (lower is better) Translates to: PVVSLEAAMSGV*RYISIPRSESE Trigger: TTCGGATTCACTTCTGGGGATGCTGATGTAGCGGCAAACACCTGACATGGCAGCCTCGAGGGAGACCACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000288861.5 ENST00000403670.7 |
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| CDS CAA 72 bp | TTCCAGGTCCTCCCAGTGCATCTGATACCTCAAGCATaGCCCCATGCCAACCACACCTTTCTGTCTGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: FQVLPVHLIPQA*PHANHTFLSAS Trigger: GCTGGCAGACAGAAAGGTGTGGTTGGCATGGGGCAATGCTTGAGGTATCAGATGCACTGGGAGGACCTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS CAA 90 bp | CTGGTACTCTTCCAGGTCCTCCCAGTGCATCTGATACCTCAAGCATaGCCCCATGCCAACCACACCTTTCTGTCTGCCAGCAGTAGAACC | + |
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Preference number: 6 (lower is better) Translates to: LVLFQVLPVHLIPQA*PHANHTFLSASSRT Trigger: GGTTCTACTGCTGGCAGACAGAAAGGTGTGGTTGGCATGGGGCAATGCTTGAGGTATCAGATGCACTGGGAGGACCTGGAAGAGTACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000288861.5 |
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| CDS CCA 72 bp | ATCATAGATGCGAAAGGCATACTCAATCTTCAGGCTTaGGCAGGCCTGCTCGCTGAACACAGATGCCATGCC | + |
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Preference number: 6 (lower is better) Translates to: IIDAKGILNLQA*AGLLAEHRCHA Trigger: GGCATGGCATCTGTGTTCAGCGAGCAGGCCTGCCCAAGCCTGAAGATTGAGTATGCCTTTCGCATCTATGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000288861.5 ENST00000403670.7 ENST00000405346.3 |
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| CDS CAA 90 bp | AACACAGATGCCATGCCCAGCACATCCTCAAAGGAGAACATGCCTTaGTGGGAGAACACTCTGCAGATACGGTCTCTGAAAGGGTTGACC | + |
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Preference number: 6 (lower is better) Translates to: NTDAMPSTSSKENMP*WENTLQIRSLKGLT Trigger: GGTCAACCCTTTCAGAGACCGTATCTGCAGAGTGTTCTCCCACAAAGGCATGTTCTCCTTTGAGGATGTGCTGGGCATGGCATCTGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000288861.5 ENST00000403670.7 |
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| CDS CAA 90 bp | GGAGACTTGGCCATTGCATGTTCAAACTCTGAGAAGGACAGCATGTaGTCATTGTCCAGATCCGACTCACTCAGGACGTGGTTCGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: GDLAIACSNSEKDSM*SLSRSDSLRTWFVR Trigger: CCTCACGAACCACGTCCTGAGTGAGTCGGATCTGGACAATGACAACATGCTGTCCTTCTCAGAGTTTGAACATGCAATGGCCAAGTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000288861.5 ENST00000403670.7 ENST00000405346.3 |
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| CDS CAA 90 bp | AACACAGATGCCATGCCCAGCACATCCTCAAAGGAGAACATGCCTTaGTGGGAGAACACTCTGCAGATACGGTCTCTGAAAGGGTTGACT | + |
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Preference number: 6 (lower is better) Translates to: NTDAMPSTSSKENMP*WENTLQIRSLKGLT Trigger: AGTCAACCCTTTCAGAGACCGTATCTGCAGAGTGTTCTCCCACAAAGGCATGTTCTCCTTTGAGGATGTGCTGGGCATGGCATCTGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000405346.3 |
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| CDS TCA 72 bp | GTCAGGTGTTTGCCGCTACATCAGCATCCCCAGAAGTaGATCCGAAAGGAGTTCATGAAATCTGGAGACTTG | + |
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Preference number: 6 (lower is better) Translates to: VRCLPLHQHPQK*IRKEFMKSGDL Trigger: CAAGTCTCCAGATTTCATGAACTCCTTTCGGATTCACTTCTGGGGATGCTGATGTAGCGGCAAACACCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000288861.5 ENST00000403670.7 ENST00000405346.3 |
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| CDS GCA 72 bp | ATGTCATCACTGTTCAGCAGTCGCAGGATGATCCTCTaGAGATCCTCCTCATCAATGAAGCCATTCTCATTA | + |
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Preference number: 6 (lower is better) Translates to: MSSLFSSRRMIL*RSSSSMKPFSL Trigger: TAATGAGAATGGCTTCATTGATGAGGAGGATCTGCAGAGGATCATCCTGCGACTGCTGAACAGTGATGACAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000288861.5 ENST00000403670.7 ENST00000405346.3 |
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| CDS CAA 72 bp | CTGAGTAAATTTCAGGACTTTTCATCGCTTTCAGCCTaGGGAGTGAGTTCTTTGCAAGCTGTTCTAAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: LSKFQDFSSLSA*GVSSLQAVLSR Trigger: TCTGCTTAGAACAGCTTGCAAAGAACTCACTCCCAAGGCTGAAAGCGATGAAAAGTCCTGAAATTTACTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000405346.3 |
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