Pregenerated sensors for CIB3 (Homo sapiens)
Ensembl gene IDs: ENSG00000141977Ensembl transcript IDs: ENST00000269878.8, ENST00000597251.5
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGTGGAAGGTGCTGAGGAAGTCTGGTGCCCGGAGGATCATGTTCTaGAAATCTTCCAGGGACAGCCGCCCATCATGGTCTCCATCAGCC | + |
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Preference number: 1 (lower is better) Translates to: MWKVLRKSGARRIMF*KSSRDSRPSWSPSA Trigger: GGCTGATGGAGACCATGATGGGCGGCTGTCCCTGGAAGATTTCCAGAACATGATCCTCCGGGCACCAGACTTCCTCAGCACCTTCCACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597251.5 |
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| 3UTR-3UTR CCA 90 bp | CTCCATCAGCCTCATCCAGCACCTTCTCACATACCAGGCTCACCTCCTCGGCACACCTGGGCAATCCTCTaGCGGAAGGGGTTGTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: LHQPHPAPSHIPGSPPRHTWAIL*RKGLSF Trigger: GAAGGACAACCCCTTCCGCCAGAGGATTGCCCAGGT...GTGCCGAGGAGGTGAGCCTGGTATGTGAGAAGGTGCTGGATGAGGCTGATGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597251.5 |
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| 3UTR-3UTR CCA 90 bp | TCAGCCTCATCCAGCACCTTCTCACATACCAGGCTCACCTCCTCGGCACTCAGCTTGTCCAGGGTCATGTaGCCATCCCCATCCTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: SASSSTFSHTRLTSSALSLSRVM*PSPSSE Trigger: CTCTGAGGATGGGGATGGCCACATGACCCTGGACAA...GCTGAGTGCCGAGGAGGTGAGCCTGGTATGTGAGAAGGTGCTGGATGAGGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597251.5 |
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| 3UTR-3UTR CCA 90 bp | CCCTCCTATAGCTCGGCTCCTCTGTGGTGCCATCAGATTCGGATGTGGAAGGTGGACAGCCGCCCATCATaGTCTCCATCAGCCTCATCC | + |
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Preference number: 2 (lower is better) Translates to: PSYSSAPLWCHQIRMWKVDSRPS*SPSASS Trigger: GGATGAGGCTGATGGAGACCATGATGGGCGGCTGTC...CACCTTCCACATCCGAATCTGATGGCACCACAGAGGAGCCGAGCTATAGGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597251.5 |
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| 3UTR-3UTR GCA 90 bp | TGTTCTGGAAATCTTCCAGGGACAGCCGCCCATCATGGTCTCCATCAGCCTCATAGTTTGGTCACCGTCTaGTCCAGGTCCCACGCACAA | + |
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Preference number: 2 (lower is better) Translates to: CSGNLPGTAAHHGLHQPHSLVTV*SRSHAQ Trigger: TTGTGCGTGGGACCTGGAGCAGACGGTGACCAAACT...ATGAGGCTGATGGAGACCATGATGGGCGGCTGTCCCTGGAAGATTTCCAGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597251.5 |
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| 3UTR-3UTR CCA 90 bp | ATTTCACTCATCACGGAAAACATGTCCAAAAAGTTGTCCAGGGTCATGTGGCCATCCTCAGAGAATACCTaGGCAATCCTCTGGCGGAAG | + |
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Preference number: 2 (lower is better) Translates to: ISLITENMSKKLSRVMWPSSENT*AILWRK Trigger: CTTCCGCCAGAGGATTGCCCAGGTATTCTCTGAGGA...TGGCCACATGACCCTGGACAACTTTTTGGACATGTTTTCCGTGATGAGTGAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000597251.5 |
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| 3UTR GCA 72 bp | GTCACCCCGCCCTCCTATAGCTCGGCTCCTCTGTGGTaGCATCAGATTCGGATGTGGAAGGTGCTGAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: VTPPSYSSAPLW*HQIRMWKVLRK Trigger: CTTCCTCAGCACCTTCCACATCCGAATCTGATGGCACCACAGAGGAGCCGAGCTATAGGAGGGCGGGGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597251.5 |
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| 3UTR CCA 72 bp | CCATCCCCATCCTCAGAGAATACCTGGGCAATCCTCTaGCGGAAGGGGTTGTCCTTCAGCTCGGGCATGCTG | + |
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Preference number: 3 (lower is better) Translates to: PSPSSENTWAIL*RKGLSFSSGML Trigger: CAGCATGCCCGAGCTGAAGGACAACCCCTTCCGCCAGAGGATTGCCCAGGTATTCTCTGAGGATGGGGATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000597251.5 |
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| 3UTR CCA 72 bp | GTGCTGAGGAAGTCTGGTGCCCGGAGGATCATGTTCTaGAAATCTTCCAGGGACAGCCGCCCATCATGGTCT | + |
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Preference number: 3 (lower is better) Translates to: VLRKSGARRIMF*KSSRDSRPSWS Trigger: AGACCATGATGGGCGGCTGTCCCTGGAAGATTTCCAGAACATGATCCTCCGGGCACCAGACTTCCTCAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597251.5 |
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| 3UTR-3UTR CAA 90 bp | TTTGGTCACCGTCTGCTCCAGGTCCCACGCACAAATGTAGTCGTCGTTGTTAAACTCTGGCGGAAGGGGTaGTCCTTCAGCTCGGGCATG | + |
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Preference number: 3 (lower is better) Translates to: FGHRLLQVPRTNVVVVVKLWRKG*SFSSGM Trigger: CATGCCCGAGCTGAAGGACAACCCCTTCCGCCAGAG...TTTAACAACGACGACTACATTTGTGCGTGGGACCTGGAGCAGACGGTGACCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597251.5 |
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| 3UTR-3UTR CAA 90 bp | TCAGCCTCATCCAGCACCTTCTCACATACCAGGCTCACCTCCTCGGCACTCAGCAACATGTCCAAAAAGTaGTCCAGGGTCATGTGGCCA | + |
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Preference number: 3 (lower is better) Translates to: SASSSTFSHTRLTSSALSNMSKK*SRVMWP Trigger: TGGCCACATGACCCTGGACAACTTTTTGGACATGTT...GCTGAGTGCCGAGGAGGTGAGCCTGGTATGTGAGAAGGTGCTGGATGAGGCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000597251.5 |
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| CDS-3UTR TCA 90 bp | GAGTCCACAGCGGGTGAGGGGTCACCCCGCCCTCCTATAGCTCGGCTCCTCTGTAGAGTCCACAGCGGGTaGGGGGTCACCCCGCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: ESTAGEGSPRPPIARLLCRVHSG*GVTPPS Trigger: GGAGGGCGGGGTGACCCCTCACCCGCTGTGGACTCT...ACAGAGGAGCCGAGCTATAGGAGGGCGGGGTGACCCCTCACCCGCTGTGGACTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000269878.8 |
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| CDS-3UTR CCA 90 bp | ACAGCGGGTGAGGGGTCACCCCGCCCTCCTATAGCTCGGCTCCTCTGTGGTGCCGAGGGGCACGAGCTGTaGGGCCAGGTCCTGGTAGCG | + |
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Preference number: 4 (lower is better) Translates to: TAGEGSPRPPIARLLCGAEGHEL*GQVLVA Trigger: CGCTACCAGGACCTGGCCCCACAGCTCGTGCCCCTC...GGCACCACAGAGGAGCCGAGCTATAGGAGGGCGGGGTGACCCCTCACCCGCTGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000269878.8 |
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| CDS-3UTR TCA 90 bp | CCAGAGTCCACAGCGGGTGAGGGGTCACCCCGCCCTCCTATAGCTCGGCTCCTCCGGGCATGCTGCCAATaGGCTCGTAGGGCACCTTCA | + |
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Preference number: 4 (lower is better) Translates to: PESTAGEGSPRPPIARLLRACCQ*ARRAPS Trigger: TGAAGGTGCCCTACGAGCTCATTGGCAGCATGCCCG...GAGGAGCCGAGCTATAGGAGGGCGGGGTGACCCCTCACCCGCTGTGGACTCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000269878.8 |
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| CDS-3UTR GCA 90 bp | AAACCAGAGTCCACAGCGGGTGAGGGGTCACCCCGCCCTCCTATAGCTCGGCTCGCCCAGACTTGGGGATaGACCCCAAAGGCTCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: KPESTAGEGSPRPPIARLAQTWG*TPKAPS Trigger: GCTGGGAGCCTTTGGGGTGCATCCCCAAGTCTGGGC...GAGCCGAGCTATAGGAGGGCGGGGTGACCCCTCACCCGCTGTGGACTCTGGTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000269878.8 |
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| CDS-3UTR CCA 90 bp | CCAGAGTCCACAGCGGGTGAGGGGTCACCCCGCCCTCCTATAGCTCGGCTCCTCTCACATCGGGGCAGGTaGTATAGTCGAGGGGCACGA | + |
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Preference number: 4 (lower is better) Translates to: PESTAGEGSPRPPIARLLSHRGR*YSRGAR Trigger: TCGTGCCCCTCGACTATACCACCTGCCCCGATGTGA...GAGGAGCCGAGCTATAGGAGGGCGGGGTGACCCCTCACCCGCTGTGGACTCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000269878.8 |
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| CDS-3UTR TCA 90 bp | ACAGCGGGTGAGGGGTCACCCCGCCCTCCTATAGCTCGGCTCCTCTGTGGTGCCTTGTTGCCCATGGTGTaGACCACAGCCCAGACTTGG | + |
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Preference number: 4 (lower is better) Translates to: TAGEGSPRPPIARLLCGALLPMV*TTAQTW Trigger: CCAAGTCTGGGCTGTGGTTCACACCATGGGCAACAA...GGCACCACAGAGGAGCCGAGCTATAGGAGGGCGGGGTGACCCCTCACCCGCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000269878.8 |
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| CDS-3UTR TCA 90 bp | ACAGCGGGTGAGGGGTCACCCCGCCCTCCTATAGCTCGGCTCCTCTGTGGTGCCCCAGCTGCTCGTGTGTaGAGACTGTCTGCTTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: TAGEGSPRPPIARLLCGAPAARV*RLSACC Trigger: GCAACAAGCAGACAGTCTTCACACACGAGCAGCTGG...GGCACCACAGAGGAGCCGAGCTATAGGAGGGCGGGGTGACCCCTCACCCGCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000269878.8 |
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| CDS-3UTR GCA 90 bp | ACAGCGGGTGAGGGGTCACCCCGCCCTCCTATAGCTCGGCTCCTCTGTGGTGCCAGTTTGGTCACCGTCTaGTCCAGGTCCCACGCACAA | + |
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Preference number: 4 (lower is better) Translates to: TAGEGSPRPPIARLLCGASLVTV*SRSHAQ Trigger: TTGTGCGTGGGACCTGGAGCAGACGGTGACCAAACT...GGCACCACAGAGGAGCCGAGCTATAGGAGGGCGGGGTGACCCCTCACCCGCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000269878.8 |
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| CDS-3UTR GCA 90 bp | ACAGCGGGTGAGGGGTCACCCCGCCCTCCTATAGCTCGGCTCCTCTGTGGTGCCGCTGAGGAAGTCTGGTaGCCGGAGGATCATGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: TAGEGSPRPPIARLLCGAAEEVW*PEDHVL Trigger: CAGAACATGATCCTCCGGGCACCAGACTTCCTCAGC...GGCACCACAGAGGAGCCGAGCTATAGGAGGGCGGGGTGACCCCTCACCCGCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000269878.8 |
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| CDS-3UTR GCA 90 bp | CCAGAGTCCACAGCGGGTGAGGGGTCACCCCGCCCTCCTATAGCTCGGCTCCTCTCGGCTCCTCTGTGGTaGCATCAGATTCGGATGTGG | + |
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Preference number: 4 (lower is better) Translates to: PESTAGEGSPRPPIARLLSAPLW*HQIRMW Trigger: CCACATCCGAATCTGATGGCACCACAGAGGAGCCGA...GAGGAGCCGAGCTATAGGAGGGCGGGGTGACCCCTCACCCGCTGTGGACTCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000269878.8 |
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| CDS-3UTR CCA 90 bp | TCCACAGCGGGTGAGGGGTCACCCCGCCCTCCTATAGCTCGGCTCCTCTGTGGTACCACAGCCCAGACTTaGGGATGCACCCCAAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: STAGEGSPRPPIARLLCGTTAQT*GCTPKA Trigger: AGCCTTTGGGGTGCATCCCCAAGTCTGGGCTGTGGT...ACCACAGAGGAGCCGAGCTATAGGAGGGCGGGGTGACCCCTCACCCGCTGTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000269878.8 |
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| CDS-3UTR CCA 90 bp | CCAGAGTCCACAGCGGGTGAGGGGTCACCCCGCCCTCCTATAGCTCGGCTCCTCTTGTCCAGGGTCATGTaGCCATCCCCATCCTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: PESTAGEGSPRPPIARLLLSRVM*PSPSSE Trigger: CTCTGAGGATGGGGATGGCCACATGACCCTGGACAA...GAGGAGCCGAGCTATAGGAGGGCGGGGTGACCCCTCACCCGCTGTGGACTCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000269878.8 |
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| CDS-3UTR CCA 90 bp | TCCACAGCGGGTGAGGGGTCACCCCGCCCTCCTATAGCTCGGCTCCTCTGTGGTGACAGCCGCCCATCATaGTCTCCATCAGCCTCATCC | + |
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Preference number: 4 (lower is better) Translates to: STAGEGSPRPPIARLLCGDSRPS*SPSASS Trigger: GGATGAGGCTGATGGAGACCATGATGGGCGGCTGTC...ACCACAGAGGAGCCGAGCTATAGGAGGGCGGGGTGACCCCTCACCCGCTGTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000269878.8 |
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| CDS-3UTR CCA 90 bp | CCAGAGTCCACAGCGGGTGAGGGGTCACCCCGCCCTCCTATAGCTCGGCTCCTCGGTGCTGAGGAAGTCTaGTGCCCGGAGGATCATGTT | + |
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Preference number: 4 (lower is better) Translates to: PESTAGEGSPRPPIARLLGAEEV*CPEDHV Trigger: AACATGATCCTCCGGGCACCAGACTTCCTCAGCACC...GAGGAGCCGAGCTATAGGAGGGCGGGGTGACCCCTCACCCGCTGTGGACTCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000269878.8 |
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| CDS-3UTR CCA 90 bp | GAGTCCACAGCGGGTGAGGGGTCACCCCGCCCTCCTATAGCTCGGCTCCTCTGTTCCTCAGAGAATACCTaGGCAATCCTCTGGCGGAAG | + |
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Preference number: 4 (lower is better) Translates to: ESTAGEGSPRPPIARLLCSSENT*AILWRK Trigger: CTTCCGCCAGAGGATTGCCCAGGTATTCTCTGAGGA...ACAGAGGAGCCGAGCTATAGGAGGGCGGGGTGACCCCTCACCCGCTGTGGACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000269878.8 |
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| CDS-3UTR CCA 90 bp | ACAGCGGGTGAGGGGTCACCCCGCCCTCCTATAGCTCGGCTCCTCTGTGGTGCCCGGAGGATCATGTTCTaGAAATCTTCCAGGGACAGC | + |
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Preference number: 4 (lower is better) Translates to: TAGEGSPRPPIARLLCGARRIMF*KSSRDS Trigger: GCTGTCCCTGGAAGATTTCCAGAACATGATCCTCCG...GGCACCACAGAGGAGCCGAGCTATAGGAGGGCGGGGTGACCCCTCACCCGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000269878.8 |
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| CDS-3UTR CCA 90 bp | AAACCAGAGTCCACAGCGGGTGAGGGGTCACCCCGCCCTCCTATAGCTCGGCTCAGCTCGGCTCCTCTGTaGTGCCATCAGATTCGGATG | + |
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Preference number: 4 (lower is better) Translates to: KPESTAGEGSPRPPIARLSSAPL*CHQIRM Trigger: CATCCGAATCTGATGGCACCACAGAGGAGCCGAGCT...GAGCCGAGCTATAGGAGGGCGGGGTGACCCCTCACCCGCTGTGGACTCTGGTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000269878.8 |
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| CDS-3UTR TCA 90 bp | ATCTTCCAGGGACAGCCGCCCATCATGGTCTCCATCAGCCTCATCCAGCACCTTCGGGCATGCTGCCAATaGGCTCGTAGGGCACCTTCA | + |
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Preference number: 4 (lower is better) Translates to: IFQGQPPIMVSISLIQHLRACCQ*ARRAPS Trigger: TGAAGGTGCCCTACGAGCTCATTGGCAGCATGCCCG...AAGGTGCTGGATGAGGCTGATGGAGACCATGATGGGCGGCTGTCCCTGGAAGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597251.5 |
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| CDS-3UTR GCA 90 bp | CAGAAACCAGAGTCCACAGCGGGTGAGGGGTCACCCCGCCCTCCTATAGCTCGGAGACTGTCTGCTTGTTaGCCATGGTGTGAACCACAG | + |
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Preference number: 4 (lower is better) Translates to: QKPESTAGEGSPRPPIARRLSAC*PWCEPQ Trigger: CTGTGGTTCACACCATGGGCAACAAGCAGACAGTCT...CCGAGCTATAGGAGGGCGGGGTGACCCCTCACCCGCTGTGGACTCTGGTTTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000269878.8 |
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| CDS-3UTR CCA 90 bp | TCCACAGCGGGTGAGGGGTCACCCCGCCCTCCTATAGCTCGGCTCCTCTGTGGTCATCAGATTCGGATGTaGAAGGTGCTGAGGAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: STAGEGSPRPPIARLLCGHQIRM*KVLRKS Trigger: AGACTTCCTCAGCACCTTCCACATCCGAATCTGATG...ACCACAGAGGAGCCGAGCTATAGGAGGGCGGGGTGACCCCTCACCCGCTGTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000269878.8 |
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| CDS-3UTR TCA 90 bp | TCAGCCTCATCCAGCACCTTCTCACATACCAGGCTCACCTCCTCGGCACTCAGCCCAGCTGCTCGTGTGTaGAGACTGTCTGCTTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: SASSSTFSHTRLTSSALSPAARV*RLSACC Trigger: GCAACAAGCAGACAGTCTTCACACACGAGCAGCTGG...GCTGAGTGCCGAGGAGGTGAGCCTGGTATGTGAGAAGGTGCTGGATGAGGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597251.5 |
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| CDS-3UTR GCA 90 bp | CGCCCTCCTATAGCTCGGCTCCTCTGTGGTGCCATCAGATTCGGATGTGGAAGGTCGGCTCCTCTGTGGTaGCATCAGATTCGGATGTGG | + |
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Preference number: 4 (lower is better) Translates to: RPPIARLLCGAIRFGCGRSAPLW*HQIRMW Trigger: CCACATCCGAATCTGATGGCACCACAGAGGAGCCGA...CCTTCCACATCCGAATCTGATGGCACCACAGAGGAGCCGAGCTATAGGAGGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597251.5 |
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| CDS-3UTR CCA 90 bp | TTTATTCTCAGAAACCAGAGTCCACAGCGGGTGAGGGGTCACCCCGCCCTCCTAACCTGGGCAATCCTCTaGCGGAAGGGGTTGTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: FILRNQSPQRVRGHPALLTWAIL*RKGLSF Trigger: GAAGGACAACCCCTTCCGCCAGAGGATTGCCCAGGT...TAGGAGGGCGGGGTGACCCCTCACCCGCTGTGGACTCTGGTTTCTGAGAATAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000269878.8 |
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| CDS-3UTR CCA 90 bp | ATCTTCCAGGGACAGCCGCCCATCATGGTCTCCATCAGCCTCATCCAGCACCTTACCTGGGCAATCCTCTaGCGGAAGGGGTTGTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: IFQGQPPIMVSISLIQHLTWAIL*RKGLSF Trigger: GAAGGACAACCCCTTCCGCCAGAGGATTGCCCAGGT...AAGGTGCTGGATGAGGCTGATGGAGACCATGATGGGCGGCTGTCCCTGGAAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597251.5 |
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| CDS-3UTR CCA 90 bp | CCCGCGTCAGTTTGGTCACCGTCTGCTCCAGGTCCCACGCACAAATGTAGTCGTTTGTCCAGGGTCATGTaGCCATCCCCATCCTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: PASVWSPSAPGPTHKCSRLSRVM*PSPSSE Trigger: CTCTGAGGATGGGGATGGCCACATGACCCTGGACAA...ACGACTACATTTGTGCGTGGGACCTGGAGCAGACGGTGACCAAACTGACGCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597251.5 |
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| CDS-3UTR CCA 90 bp | GGTGCCCGGAGGATCATGTTCTGGAAATCTTCCAGGGACAGCCGCCCATCATGGAGCTCGGCTCCTCTGTaGTGCCATCAGATTCGGATG | + |
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Preference number: 4 (lower is better) Translates to: GARRIMFWKSSRDSRPSWSSAPL*CHQIRM Trigger: CATCCGAATCTGATGGCACCACAGAGGAGCCGAGCT...CCATGATGGGCGGCTGTCCCTGGAAGATTTCCAGAACATGATCCTCCGGGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597251.5 |
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| CDS-3UTR CCA 90 bp | GCCCATCATGGTCTCCATCAGCCTCATCCAGCACCTTCTCACATACCAGGCTCATCACATCGGGGCAGGTaGTATAGTCGAGGGGCACGA | + |
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Preference number: 4 (lower is better) Translates to: AHHGLHQPHPAPSHIPGSSHRGR*YSRGAR Trigger: TCGTGCCCCTCGACTATACCACCTGCCCCGATGTGA...TGAGCCTGGTATGTGAGAAGGTGCTGGATGAGGCTGATGGAGACCATGATGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000597251.5 |
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| CDS-3UTR CCA 90 bp | ATCTTCCAGGGACAGCCGCCCATCATGGTCTCCATCAGCCTCATCCAGCACCTTGGTGCTGAGGAAGTCTaGTGCCCGGAGGATCATGTT | + |
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Preference number: 4 (lower is better) Translates to: IFQGQPPIMVSISLIQHLGAEEV*CPEDHV Trigger: AACATGATCCTCCGGGCACCAGACTTCCTCAGCACC...AAGGTGCTGGATGAGGCTGATGGAGACCATGATGGGCGGCTGTCCCTGGAAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597251.5 |
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| CDS-3UTR CCA 90 bp | CTTGTGTTTATTCTCAGAAACCAGAGTCCACAGCGGGTGAGGGGTCACCCCGCCTCTGCTTGTTGCCCATaGTGTGAACCACAGCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LVFILRNQSPQRVRGHPASACCP*CEPQPR Trigger: TCTGGGCTGTGGTTCACACCATGGGCAACAAGCAGA...GGCGGGGTGACCCCTCACCCGCTGTGGACTCTGGTTTCTGAGAATAAACACAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000269878.8 |
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| CDS-3UTR CCA 90 bp | GGATCATGTTCTGGAAATCTTCCAGGGACAGCCGCCCATCATGGTCTCCATCAGGACAGCCGCCCATCATaGTCTCCATCAGCCTCATCC | + |
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Preference number: 4 (lower is better) Translates to: GSCSGNLPGTAAHHGLHQDSRPS*SPSASS Trigger: GGATGAGGCTGATGGAGACCATGATGGGCGGCTGTC...CTGATGGAGACCATGATGGGCGGCTGTCCCTGGAAGATTTCCAGAACATGATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597251.5 |
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| CDS-3UTR CCA 90 bp | CTCCATCAGCCTCATCCAGCACCTTCTCACATACCAGGCTCACCTCCTCGGCACCGGAGGATCATGTTCTaGAAATCTTCCAGGGACAGC | + |
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Preference number: 4 (lower is better) Translates to: LHQPHPAPSHIPGSPPRHRRIMF*KSSRDS Trigger: GCTGTCCCTGGAAGATTTCCAGAACATGATCCTCCG...GTGCCGAGGAGGTGAGCCTGGTATGTGAGAAGGTGCTGGATGAGGCTGATGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597251.5 |
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| CDS-3UTR TCA 90 bp | ACTTGTGTTTATTCTCAGAAACCAGAGTCCACAGCGGGTGAGGGGTCACCCCGCAAGCATAGTAAGCCTTaGGGTCGCGGGGAGCCATTT | + |
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Preference number: 4 (lower is better) Translates to: TCVYSQKPESTAGEGSPRKHSKP*GRGEPF Trigger: AAATGGCTCCCCGCGACCTCAAGGCTTACTATGCTT...GCGGGGTGACCCCTCACCCGCTGTGGACTCTGGTTTCTGAGAATAAACACAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000269878.8 |
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| CDS-3UTR GCA 90 bp | GATCATGTTCTGGAAATCTTCCAGGGACAGCCGCCCATCATGGTCTCCATCAGCAGTTTGGTCACCGTCTaGTCCAGGTCCCACGCACAA | + |
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Preference number: 4 (lower is better) Translates to: DHVLEIFQGQPPIMVSISSLVTV*SRSHAQ Trigger: TTGTGCGTGGGACCTGGAGCAGACGGTGACCAAACT...GCTGATGGAGACCATGATGGGCGGCTGTCCCTGGAAGATTTCCAGAACATGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597251.5 |
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| CDS-3UTR CCA 90 bp | TCACTCATCACGGAAAACATGTCCAAAAAGTTGTCCAGGGTCATGTGGCCATCCGAGGGGCACGAGCTGTaGGGCCAGGTCCTCATGATC | + |
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Preference number: 4 (lower is better) Translates to: SLITENMSKKLSRVMWPSEGHEL*GQVLMI Trigger: GATCATGAGGACCTGGCCCCACAGCTCGTGCCCCTC...GGATGGCCACATGACCCTGGACAACTTTTTGGACATGTTTTCCGTGATGAGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000597251.5 |
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| CDS-3UTR TCA 90 bp | TCATGTTCTGGAAATCTTCCAGGGACAGCCGCCCATCATGGTCTCCATCAGCCTAAGCATAGTAAGCCTTaGGGTCGCGGGGAGCCATTT | + |
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Preference number: 4 (lower is better) Translates to: SCSGNLPGTAAHHGLHQPKHSKP*GRGEPF Trigger: AAATGGCTCCCCGCGACCTCAAGGCTTACTATGCTT...AGGCTGATGGAGACCATGATGGGCGGCTGTCCCTGGAAGATTTCCAGAACATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597251.5 |
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| CDS-3UTR CCA 90 bp | TTTGGTCACCGTCTGCTCCAGGTCCCACGCACAAATGTAGTCGTCGTTGTTAAATCCTCAGAGAATACCTaGGCAATCCTCTGGCGGAAG | + |
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Preference number: 4 (lower is better) Translates to: FGHRLLQVPRTNVVVVVKSSENT*AILWRK Trigger: CTTCCGCCAGAGGATTGCCCAGGTATTCTCTGAGGA...TTTAACAACGACGACTACATTTGTGCGTGGGACCTGGAGCAGACGGTGACCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597251.5 |
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| CDS-3UTR CCA 90 bp | GATCATGTTCTGGAAATCTTCCAGGGACAGCCGCCCATCATGGTCTCCATCAGCCATCAGATTCGGATGTaGAAGGTGCTGAGGAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: DHVLEIFQGQPPIMVSISHQIRM*KVLRKS Trigger: AGACTTCCTCAGCACCTTCCACATCCGAATCTGATG...GCTGATGGAGACCATGATGGGCGGCTGTCCCTGGAAGATTTCCAGAACATGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597251.5 |
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| CDS-3UTR CAA 90 bp | ACAGCGGGTGAGGGGTCACCCCGCCCTCCTATAGCTCGGCTCCTCTGTGGTGCCAACCACAGCCCAGACTaGGGGATGCACCCCAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: TAGEGSPRPPIARLLCGANHSPD*GMHPKG Trigger: GCCTTTGGGGTGCATCCCCAAGTCTGGGCTGTGGTT...GGCACCACAGAGGAGCCGAGCTATAGGAGGGCGGGGTGACCCCTCACCCGCTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000269878.8 |
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| CDS-3UTR CAA 90 bp | GAGTCCACAGCGGGTGAGGGGTCACCCCGCCCTCCTATAGCTCGGCTCCTCTGTCTCTGGCGGAAGGGGTaGTCCTTCAGCTCGGGCATG | + |
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Preference number: 5 (lower is better) Translates to: ESTAGEGSPRPPIARLLCLWRKG*SFSSGM Trigger: CATGCCCGAGCTGAAGGACAACCCCTTCCGCCAGAG...ACAGAGGAGCCGAGCTATAGGAGGGCGGGGTGACCCCTCACCCGCTGTGGACTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000269878.8 |
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| CDS-3UTR CAA 90 bp | TACCTGGGCAATCCTCTGGCGGAAGGGGTTGTCCTTCAGCTCGGGCATGCTGCCCTCTGGCGGAAGGGGTaGTCCTTCAGCTCGGGCATG | + |
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Preference number: 5 (lower is better) Translates to: YLGNPLAEGVVLQLGHAALWRKG*SFSSGM Trigger: CATGCCCGAGCTGAAGGACAACCCCTTCCGCCAGAG...GGCAGCATGCCCGAGCTGAAGGACAACCCCTTCCGCCAGAGGATTGCCCAGGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000597251.5 |
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| CDS TCA 90 bp | TCCTCTGGCGGAAGGGGTTGTCCTTCAGCTCGGGCATGCTGCCAATaGGCTCGTAGGGCACCTTCACATCGGGGCAGGTGGTATAGTCGA | + |
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Preference number: 5 (lower is better) Translates to: SSGGRGCPSARACCQ*ARRAPSHRGRWYSR Trigger: TCGACTATACCACCTGCCCCGATGTGAAGGTGCCCTACGAGCTCATTGGCAGCATGCCCGAGCTGAAGGACAACCCCTTCCGCCAGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000269878.8 ENST00000597251.5 |
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| CDS CCA 90 bp | CACCTTCACATCGGGGCAGGTGGTATAGTCGAGGGGCACGAGCTGTaGGGCCAGGTCCTGGTAGCGATAGAAGAGCCTCATGATCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: HLHIGAGGIVEGHEL*GQVLVAIEEPHDLL Trigger: AAGGAGATCATGAGGCTCTTCTATCGCTACCAGGACCTGGCCCCACAGCTCGTGCCCCTCGACTATACCACCTGCCCCGATGTGAAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000269878.8 |
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| CDS-3UTR CAA 90 bp | CTTGTGTTTATTCTCAGAAACCAGAGTCCACAGCGGGTGAGGGGTCACCCCGCCAACATGTCCAAAAAGTaGTCCAGGGTCATGTGGCCA | + |
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Preference number: 5 (lower is better) Translates to: LVFILRNQSPQRVRGHPANMSKK*SRVMWP Trigger: TGGCCACATGACCCTGGACAACTTTTTGGACATGTT...GGCGGGGTGACCCCTCACCCGCTGTGGACTCTGGTTTCTGAGAATAAACACAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000269878.8 |
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| CDS-3UTR CAA 90 bp | CGGAGGATCATGTTCTGGAAATCTTCCAGGGACAGCCGCCCATCATGGTCTCCAAACATGTCCAAAAAGTaGTCCAGGGTCATGTGGCCA | + |
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Preference number: 5 (lower is better) Translates to: RRIMFWKSSRDSRPSWSPNMSKK*SRVMWP Trigger: TGGCCACATGACCCTGGACAACTTTTTGGACATGTT...TGGAGACCATGATGGGCGGCTGTCCCTGGAAGATTTCCAGAACATGATCCTCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000597251.5 |
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| CDS TCA 72 bp | GGAAGGGGTTGTCCTTCAGCTCGGGCATGCTGCCAATaGGCTCGTAGGGCACCTTCACATCGGGGCAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: GRGCPSARACCQ*ARRAPSHRGRW Trigger: CCACCTGCCCCGATGTGAAGGTGCCCTACGAGCTCATTGGCAGCATGCCCGAGCTGAAGGACAACCCCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000269878.8 ENST00000597251.5 |
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| CDS CCA 72 bp | ATCGGGGCAGGTGGTATAGTCGAGGGGCACGAGCTGTaGGGCCAGGTCCTGGTAGCGATAGAAGAGCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: IGAGGIVEGHEL*GQVLVAIEEPH Trigger: ATGAGGCTCTTCTATCGCTACCAGGACCTGGCCCCACAGCTCGTGCCCCTCGACTATACCACCTGCCCCGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000269878.8 |
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