Pregenerated sensors for CIAPIN1 (Homo sapiens)
Ensembl gene IDs: ENSG00000005194Ensembl transcript IDs: ENST00000563561.1, ENST00000564885.1, ENST00000565368.5, ENST00000566284.1, ENST00000569246.5
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CAGCAATATGAGAGGCTGCTGAGGGAGACAGAAGTGGGAGGAGGATaGGGGAAGTACCGTGTGTGCTCTGTCTACAGAGGGCAGCCACTA | + |
|
Preference number: 5 (lower is better) Translates to: QQYERLLRETEVGGG*GKYRVCSVYRGQPL Trigger: TAGTGGCTGCCCTCTGTAGACAGAGCACACACGGTACTTCCCTCATCCTCCTCCCACTTCTGTCTCCCTCAGCAGCCTCTCATATTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564885.1 |
||
| CDS CCA 90 bp | GTGTGTGCTCTGTCTACAGAGGGCAGCCACTACTCAAGCTTCAGCTaGTTATCATGCTGGGGAAAGTGGACCCAGATTGCCATATTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VCALSTEGSHYSSFS*LSCWGKWTQIAIFS Trigger: GGAAAATATGGCAATCTGGGTCCACTTTCCCCAGCATGATAACCAGCTGAAGCTTGAGTAGTGGCTGCCCTCTGTAGACAGAGCACACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564885.1 |
||
| CDS TCA 90 bp | GAGAACAGGAACAGGGCACTCTCATACACCATTACCACTACACTGTaGGGTCTTCTGAGGAGAAACGTTAATTCTGGGACCTGGAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ENRNRALSYTITTTL*GLLRRNVNSGTWKD Trigger: GTCCTTCCAGGTCCCAGAATTAACGTTTCTCCTCAGAAGACCTCACAGTGTAGTGGTAATGGTGTATGAGAGTGCCCTGTTCCTGTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563561.1 |
||
| CDS TCA 90 bp | GCAATGAGTGATACAGTCGTGGTCTCTGCTAATGAAAAGCTAAAGTaGCTGCAGGCTTCGAGAGGAAACTTGGAGTCCAGGGTAAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: AMSDTVVVSANEKLK*LQASRGNLESRVKK Trigger: CTTCTTTACCCTGGACTCCAAGTTTCCTCTCGAAGCCTGCAGTCACTTTAGCTTTTCATTAGCAGAGACCACGACTGTATCACTCATTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569246.5 |
||
| CDS CCA 90 bp | TCTACAGAGGGCAGCCACTACTCAAGCTTCAGCTGGTTATCATGCTaGGGAAAGTGGACCCAGATTGCCATATTTTCCAAATTCAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: STEGSHYSSFSWLSC*GKWTQIAIFSKFKN Trigger: GTTCTTGAATTTGGAAAATATGGCAATCTGGGTCCACTTTCCCCAGCATGATAACCAGCTGAAGCTTGAGTAGTGGCTGCCCTCTGTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564885.1 |
||
| CDS TCA 90 bp | ACAGGGCACTCTCATACACCATTACCACTACACTGTGAGGTCTTCTaGGGAGAAACGTTAATTCTGGGACCTGGAAGGACCTCATTAATT | + |
|
Preference number: 5 (lower is better) Translates to: TGHSHTPLPLHCEVF*GETLILGPGRTSLI Trigger: AATTAATGAGGTCCTTCCAGGTCCCAGAATTAACGTTTCTCCTCAGAAGACCTCACAGTGTAGTGGTAATGGTGTATGAGAGTGCCCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563561.1 |
||
| CDS TCA 90 bp | ACAACATTAGAAACTCTACTGTATATGCTAAAGAGTCTGAATACATaGACCCCATTATCTCAAGTCTTCATAAGCCCAACATTCCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TTLETLLYMLKSLNT*TPLSQVFISPTFPK Trigger: CTTTGGGAATGTTGGGCTTATGAAGACTTGAGATAATGGGGTTCATGTATTCAGACTCTTTAGCATATACAGTAGAGTTTCTAATGTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566284.1 |
||
| CDS CCA 72 bp | CTGTCTACAGAGGGCAGCCACTACTCAAGCTTCAGCTaGTTATCATGCTGGGGAAAGTGGACCCAGATTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LSTEGSHYSSFS*LSCWGKWTQIA Trigger: GGCAATCTGGGTCCACTTTCCCCAGCATGATAACCAGCTGAAGCTTGAGTAGTGGCTGCCCTCTGTAGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564885.1 |
||
| CDS GCA 72 bp | GAGGGCAGCCACTACTCAAGCTTCAGCTGGTTATCATaGTGGGGAAAGTGGACCCAGATTGCCATATTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: EGSHYSSFSWLS*WGKWTQIAIFS Trigger: GGAAAATATGGCAATCTGGGTCCACTTTCCCCAGCATGATAACCAGCTGAAGCTTGAGTAGTGGCTGCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564885.1 |
||
| CDS CAA 72 bp | GTCCAGGGTAAAGAAGGTGTCCACCCTGTCCTCCTTTaGGTTGATCATCATGTTCAACCTGACCACATGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VQGKEGVHPVLL*VDHHVQPDHML Trigger: GAGCATGTGGTCAGGTTGAACATGATGATCAACCAAAAGGAGGACAGGGTGGACACCTTCTTTACCCTGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565368.5 ENST00000569246.5 |
||
| CDS TCA 72 bp | GATACAGTCGTGGTCTCTGCTAATGAAAAGCTAAAGTaGCTGCAGGCTTCGAGAGGAAACTTGGAGTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: DTVVVSANEKLK*LQASRGNLESR Trigger: CCTGGACTCCAAGTTTCCTCTCGAAGCCTGCAGTCACTTTAGCTTTTCATTAGCAGAGACCACGACTGTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569246.5 |
||
| CDS CCA 72 bp | TCCAGGGTAAAGAAGGTGTCCACCCTGTCCTCCTTTTaGTTGATCATCATGTTCAACCTGACCACATGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SRVKKVSTLSSF*LIIMFNLTTCS Trigger: TGAGCATGTGGTCAGGTTGAACATGATGATCAACCAAAAGGAGGACAGGGTGGACACCTTCTTTACCCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000565368.5 ENST00000569246.5 |
||
| CDS CCA 72 bp | GGCAGCCACTACTCAAGCTTCAGCTGGTTATCATGCTaGGGAAAGTGGACCCAGATTGCCATATTTTCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: GSHYSSFSWLSC*GKWTQIAIFSK Trigger: TTTGGAAAATATGGCAATCTGGGTCCACTTTCCCCAGCATGATAACCAGCTGAAGCTTGAGTAGTGGCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564885.1 |
||
| CDS TCA 72 bp | TCTCATACACCATTACCACTACACTGTGAGGTCTTCTaGGGAGAAACGTTAATTCTGGGACCTGGAAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: SHTPLPLHCEVF*GETLILGPGRT Trigger: GGTCCTTCCAGGTCCCAGAATTAACGTTTCTCCTCAGAAGACCTCACAGTGTAGTGGTAATGGTGTATGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563561.1 |
||
| CDS TCA 72 bp | AACAGGGCACTCTCATACACCATTACCACTACACTGTaGGGTCTTCTGAGGAGAAACGTTAATTCTGGGACC | + |
|
Preference number: 6 (lower is better) Translates to: NRALSYTITTTL*GLLRRNVNSGT Trigger: GGTCCCAGAATTAACGTTTCTCCTCAGAAGACCTCACAGTGTAGTGGTAATGGTGTATGAGAGTGCCCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563561.1 |
||
| CDS CAA 72 bp | AGGGTAAAGAAGGTGTCCACCCTGTCCTCCTTTTGGTaGATCATCATGTTCAACCTGACCACATGCTCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: RVKKVSTLSSFW*IIMFNLTTCSR Trigger: TCTTGAGCATGTGGTCAGGTTGAACATGATGATCAACCAAAAGGAGGACAGGGTGGACACCTTCTTTACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000565368.5 ENST00000569246.5 |
||
| CDS CAA 90 bp | AGAAATCAAAGGACTAATCCTCTAAAAATATCACCATCTCATTTATaGCTGGCTCAATTTCTAACATGTCCCTCTAAGCCCATTCAAACA | + |
|
Preference number: 6 (lower is better) Translates to: RNQRTNPLKISPSHL*LAQFLTCPSKPIQT Trigger: TGTTTGAATGGGCTTAGAGGGACATGTTAGAAATTGAGCCAGCAATAAATGAGATGGTGATATTTTTAGAGGATTAGTCCTTTGATTTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000563561.1 ENST00000566284.1 |
||