Pregenerated sensors for CIAO2A (Homo sapiens)
Ensembl gene IDs: ENSG00000166797Ensembl transcript IDs: ENST00000300030.8, ENST00000380290.7, ENST00000557835.5, ENST00000559705.1, ENST00000559950.1
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTAAACCAGTCAACATCCGTGGGCTCTAGTGCACTCGGAGTCCACTaGAAAAATTACTTCTTTGAAATGCCTAGGTTTCCTCACCTAGGA | + |
|
Preference number: 1 (lower is better) Translates to: LNQSTSVGSSALGVH*KNYFFEMPRFPHLG Trigger: TCCTAGGTGAGGAAACCTAGGCATTTCAAAGAAGTAATTTTTGCAGTGGACTCCGAGTGCACTAGAGCCCACGGATGTTGACTGGTTTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557835.5 |
||
| 3UTR-3UTR CCA 90 bp | GCTCATAAGTCAAGGTCCCCAGCACTGGATATTCTTTACAGATGTGTAGCCACTACCAGTCAACATCCGTaGGCTCTAGTGCACTCGGAG | + |
|
Preference number: 2 (lower is better) Translates to: AHKSRSPALDILYRCVATTSQHP*ALVHSE Trigger: CTCCGAGTGCACTAGAGCCCACGGATGTTGACTGGT...AGTGGCTACACATCTGTAAAGAATATCCAGTGCTGGGGACCTTGACTTATGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557835.5 |
||
| 3UTR-3UTR GCA 90 bp | CCACAAAGGCAGGAATGTATCTCAAAGGCTGAACTGTACCCACACATAGAAGGCCTCCAGCCCTGTGTATaGCTTTCTGAGTCTTCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: PQRQECISKAELYPHIEGLQPCV*LSESSW Trigger: CCAAGAAGACTCAGAAAGGCATACACAGGGCTGGAG...GCCTTCTATGTGTGGGTACAGTTCAGCCTTTGAGATACATTCCTGCCTTTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557835.5 |
||
| 3UTR-3UTR CCA 90 bp | CAGTCAACATCCGTGGGCTCTAGTGCACTCGGAGTCCACTGCAAAAATTACTTCAACCCAGTAGATTCTTaGCTGGCAGAAGAATCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: QSTSVGSSALGVHCKNYFNPVDS*LAEESS Trigger: ACTGGATTCTTCTGCCAGCCAAGAATCTACTGGGTT...GAAGTAATTTTTGCAGTGGACTCCGAGTGCACTAGAGCCCACGGATGTTGACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557835.5 |
||
| 3UTR CAA 90 bp | AACCCAGAGAGACAGCACCTACCCCAAGATTCACTAAAGCTCTACTaGCTAGACCTTCAATTTCAAGTACACAGCTCTCTATCCTGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: NPERQHLPQDSLKLY*LDLQFQVHSSLSCH Trigger: GTGACAGGATAGAGAGCTGTGTACTTGAAATTGAAGGTCTAGCAAGTAGAGCTTTAGTGAATCTTGGGGTAGGTGCTGTCTCTCTGGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557835.5 |
||
| 3UTR-3UTR TCA 90 bp | CCACAAAGGCAGGAATGTATCTCAAAGGCTGAACTGTACCCACACATAGAAGGCCTGTGTATGCCTTTCTaGGTCTTCTTGGTATCTATC | + |
|
Preference number: 2 (lower is better) Translates to: PQRQECISKAELYPHIEGLCMPF*VFLVSI Trigger: GATAGATACCAAGAAGACTCAGAAAGGCATACACAG...GCCTTCTATGTGTGGGTACAGTTCAGCCTTTGAGATACATTCCTGCCTTTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557835.5 |
||
| 3UTR-3UTR CCA 90 bp | CTCTCCAGCCCTGTGTATGCCTTTCTGAGTCTTCTTGGTATCTATCTCACTGTTCAAGGTCCCCAGCACTaGATATTCTTTACAGATGTG | + |
|
Preference number: 2 (lower is better) Translates to: LSSPVYAFLSLLGIYLTVQGPQH*IFFTDV Trigger: CACATCTGTAAAGAATATCCAGTGCTGGGGACCTTG...AACAGTGAGATAGATACCAAGAAGACTCAGAAAGGCATACACAGGGCTGGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557835.5 |
||
| 3UTR-3UTR GCA 90 bp | CCACAAAGGCAGGAATGTATCTCAAAGGCTGAACTGTACCCACACATAGAAGGCGCACTCGGAGTCCACTaGAAAAATTACTTCTTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: PQRQECISKAELYPHIEGALGVH*KNYFFE Trigger: TTCAAAGAAGTAATTTTTGCAGTGGACTCCGAGTGC...GCCTTCTATGTGTGGGTACAGTTCAGCCTTTGAGATACATTCCTGCCTTTGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557835.5 |
||
| 3UTR-3UTR CCA 90 bp | AAAGCTCTACTTGCTAGACCTTCAATTTCAAGTACACAGCTCTCTATCCTGTCACAGATGTGTAGCCACTaGCCTAAACCAGTCAACATC | + |
|
Preference number: 2 (lower is better) Translates to: KALLARPSISSTQLSILSQMCSH*PKPVNI Trigger: GATGTTGACTGGTTTAGGCCAGTGGCTACACATCTG...TGACAGGATAGAGAGCTGTGTACTTGAAATTGAAGGTCTAGCAAGTAGAGCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557835.5 |
||
| 3UTR TCA 72 bp | GTAGGCTCCACAAAGGCAGGAATGTATCTCAAAGGCTaGACTGTACCCACACATAGAAGGCACTTAATAAAT | + |
|
Preference number: 3 (lower is better) Translates to: VGSTKAGMYLKG*TVPTHRRHLIN Trigger: ATTTATTAAGTGCCTTCTATGTGTGGGTACAGTTCAGCCTTTGAGATACATTCCTGCCTTTGTGGAGCCTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557835.5 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCCAGCCCTGTGTATGCCTTTCTGAGTCTTCTTGGTATCTATCTCACTGTTTCACTAAAGCTCTACTaGCTAGACCTTCAATTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LSSPVYAFLSLLGIYLTVSLKLY*LDLQFQ Trigger: TTGAAATTGAAGGTCTAGCAAGTAGAGCTTTAGTGA...AACAGTGAGATAGATACCAAGAAGACTCAGAAAGGCATACACAGGGCTGGAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557835.5 |
||
| CDS-3UTR GCA 90 bp | CAGTCAACATCCGTGGGCTCTAGTGCACTCGGAGTCCACTGCAAAAATTACTTCAGCCCGGACACCCGCTaGATCTTCACGCTCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QSTSVGSSALGVHCKNYFSPDTR*IFTLSH Trigger: ATGGCTGAGCGTGAAGATGCAGCGGGTGTCCGGGCT...GAAGTAATTTTTGCAGTGGACTCCGAGTGCACTAGAGCCCACGGATGTTGACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557835.5 |
||
| CDS-3UTR GCA 90 bp | ACTGGCCTAAACCAGTCAACATCCGTGGGCTCTAGTGCACTCGGAGTCCACTGCCTCCAGCCCTGTGTATaGCTTTCTGAGTCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TGLNQSTSVGSSALGVHCLQPCV*LSESSW Trigger: CCAAGAAGACTCAGAAAGGCATACACAGGGCTGGAG...GCAGTGGACTCCGAGTGCACTAGAGCCCACGGATGTTGACTGGTTTAGGCCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557835.5 |
||
| CDS-3UTR CCA 90 bp | CCACAAAGGCAGGAATGTATCTCAAAGGCTGAACTGTACCCACACATAGAAGGCGATAGGCTGTTCCTCTaGAAGCAGCAGGCTTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PQRQECISKAELYPHIEGDRLFL*KQQASL Trigger: GAGGGAAGCCTGCTGCTTCCAGAGGAACAGCCTATC...GCCTTCTATGTGTGGGTACAGTTCAGCCTTTGAGATACATTCCTGCCTTTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557835.5 |
||
| CDS-3UTR TCA 90 bp | CCACAAAGGCAGGAATGTATCTCAAAGGCTGAACTGTACCCACACATAGAAGGCGTCGCCAAAGAGCAATaGGGTACTGTTGGCGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PQRQECISKAELYPHIEGVAKEQ*GTVGVN Trigger: GTTCACGCCAACAGTACCTCATTGCTCTTTGGCGAC...GCCTTCTATGTGTGGGTACAGTTCAGCCTTTGAGATACATTCCTGCCTTTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557835.5 |
||
| CDS-3UTR CCA 90 bp | CTCTCCAGCCCTGTGTATGCCTTTCTGAGTCTTCTTGGTATCTATCTCACTGTTACCAGTCAACATCCGTaGGCTCTAGTGCACTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSSPVYAFLSLLGIYLTVTSQHP*ALVHSE Trigger: CTCCGAGTGCACTAGAGCCCACGGATGTTGACTGGT...AACAGTGAGATAGATACCAAGAAGACTCAGAAAGGCATACACAGGGCTGGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557835.5 |
||
| CDS-3UTR GCA 90 bp | TACAGATGTGTAGCCACTGGCCTAAACCAGTCAACATCCGTGGGCTCTAGTGCAGCACTCGGAGTCCACTaGAAAAATTACTTCTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: YRCVATGLNQSTSVGSSAALGVH*KNYFFE Trigger: TTCAAAGAAGTAATTTTTGCAGTGGACTCCGAGTGC...TGCACTAGAGCCCACGGATGTTGACTGGTTTAGGCCAGTGGCTACACATCTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557835.5 |
||
| CDS-3UTR CCA 90 bp | CCAAAGAAAAGAAGCCTACTTAGAGCTCATAAGTCAAGGTCCCCAGCACTGGATGAAGCCCTCAGCTCGTaGGGTTTAAAGAAATTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PKKRSLLRAHKSRSPALDEALSS*GLKKFS Trigger: GCTGAATTTCTTTAAACCCCACGAGCTGAGGGCTTC...ATCCAGTGCTGGGGACCTTGACTTATGAGCTCTAAGTAGGCTTCTTTTCTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557835.5 |
||
| CDS-3UTR CCA 90 bp | CTCTCCAGCCCTGTGTATGCCTTTCTGAGTCTTCTTGGTATCTATCTCACTGTTAACCCAGTAGATTCTTaGCTGGCAGAAGAATCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSSPVYAFLSLLGIYLTVNPVDS*LAEESS Trigger: ACTGGATTCTTCTGCCAGCCAAGAATCTACTGGGTT...AACAGTGAGATAGATACCAAGAAGACTCAGAAAGGCATACACAGGGCTGGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557835.5 |
||
| CDS-3UTR TCA 90 bp | CTCTCCAGCCCTGTGTATGCCTTTCTGAGTCTTCTTGGTATCTATCTCACTGTTATGTATCTCAAAGGCTaGACTGTACCCACACATAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSSPVYAFLSLLGIYLTVMYLKG*TVPTHR Trigger: TCTATGTGTGGGTACAGTTCAGCCTTTGAGATACAT...AACAGTGAGATAGATACCAAGAAGACTCAGAAAGGCATACACAGGGCTGGAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557835.5 |
||
| 3UTR CAA 72 bp | AGACAGCACCTACCCCAAGATTCACTAAAGCTCTACTaGCTAGACCTTCAATTTCAAGTACACAGCTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: RQHLPQDSLKLY*LDLQFQVHSSL Trigger: TAGAGAGCTGTGTACTTGAAATTGAAGGTCTAGCAAGTAGAGCTTTAGTGAATCTTGGGGTAGGTGCTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557835.5 |
||
| CDS-3UTR GCA 90 bp | CTCTCCAGCCCTGTGTATGCCTTTCTGAGTCTTCTTGGTATCTATCTCACTGTTTATCTATCTCACTGTTaGTCTTCCTCTATTAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSPVYAFLSLLGIYLTVYLSHC*SSSISS Trigger: AGAGCTAATAGAGGAAGAGCAACAGTGAGATAGATA...AACAGTGAGATAGATACCAAGAAGACTCAGAAAGGCATACACAGGGCTGGAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557835.5 |
||
| CDS-3UTR TCA 90 bp | AAAGCTCTACTTGCTAGACCTTCAATTTCAAGTACACAGCTCTCTATCCTGTCACTGTGTATGCCTTTCTaGGTCTTCTTGGTATCTATC | + |
|
Preference number: 4 (lower is better) Translates to: KALLARPSISSTQLSILSLCMPF*VFLVSI Trigger: GATAGATACCAAGAAGACTCAGAAAGGCATACACAG...TGACAGGATAGAGAGCTGTGTACTTGAAATTGAAGGTCTAGCAAGTAGAGCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557835.5 |
||
| CDS CCA 90 bp | GAGAGCAGCCCGGACACCCGCTGCATCTTCACGCTCAGCCATCCCTaGCGACTGTCCCAATCGCGCCACCGTCTCTCAGCAGCCTCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: ESSPDTRCIFTLSHP*RLSQSRHRLSAASG Trigger: TCCCGAGGCTGCTGAGAGACGGTGGCGCGATTGGGACAGTCGCCAGGGATGGCTGAGCGTGAAGATGCAGCGGGTGTCCGGGCTGCTCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300030.8 ENST00000559705.1 ENST00000559950.1 |
||
| CDS GCA 72 bp | CTGCTCAGCGTCCAGGAGAGCAGCCCGGACACCCGCTaGATCTTCACGCTCAGCCATCCCTGGCGACTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LLSVQESSPDTR*IFTLSHPWRLS Trigger: GGACAGTCGCCAGGGATGGCTGAGCGTGAAGATGCAGCGGGTGTCCGGGCTGCTCTCCTGGACGCTGAGCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000300030.8 ENST00000380290.7 ENST00000559705.1 ENST00000559950.1 |
||