Pregenerated sensors for CHUK (Homo sapiens)
Ensembl gene IDs: ENSG00000213341Ensembl transcript IDs: ENST00000370397.8, ENST00000585551.1, ENST00000588656.1, ENST00000590930.5
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGTGCATATACCATACTACATTAACCAGCCCTCACCACAGTCTGTaGCAGCAGCCCTCCCTCTCATCATCAAGCAGCAAAATAAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: LCIYHTTLTSPHHSL*QQPSLSSSSSKIKE Trigger: TTCCTTTATTTTGCTGCTTGATGATGAGAGGGAGGGCTGCTGCCACAGACTGTGGTGAGGGCTGGTTAATGTAGTATGGTATATGCACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| 3UTR-3UTR TCA 90 bp | CACACTAAATGGGATAAAAAGATTCAAGGTCAGTTCAGATTAGATTGCAAGCAAAGCCATTTCTTCCATTaGCTGATGTCTGAAGAATGG | + |
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Preference number: 2 (lower is better) Translates to: HTKWDKKIQGQFRLDCKQSHFFH*LMSEEW Trigger: CCATTCTTCAGACATCAGTCAATGGAAGAAATGGCT...TTGCTTGCAATCTAATCTGAACTGACCTTGAATCTTTTTATCCCATTTAGTGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| 3UTR TCA 72 bp | TACTTAGCAGATGATAGAGGTCCACAGTCCTTTCTCTaGAACCCTTGGGGCAAGTTGTTTCAGAATTATGAA | + |
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Preference number: 3 (lower is better) Translates to: YLADDRGPQSFL*NPWGKLFQNYE Trigger: TTCATAATTCTGAAACAACTTGCCCCAAGGGTTTCAGAGAAAGGACTGTGGACCTCTATCATCTGCTAAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR GCA 90 bp | AGATTGCAAGCAAATGAATTTTGTCACCAAGCTTATGGAAACCTTGTTTTCAGATCCCGAAGCCGCCGGTaGCCAGCCGCTCCCGCATCT | + |
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Preference number: 4 (lower is better) Translates to: RLQANEFCHQAYGNLVFRSRSRR*PAAPAS Trigger: AGATGCGGGAGCGGCTGGGCACCGGCGGCTTCGGGA...TCTGAAAACAAGGTTTCCATAAGCTTGGTGACAAAATTCATTTGCTTGCAATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR CCA 90 bp | AGTTTTGTGCATATACCATACTACATTAACCAGCCCTCACCACAGTCTGTGGCACTGCACCTTCTAGACTaGATCCTACAAGGGACCGGG | + |
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Preference number: 4 (lower is better) Translates to: SFVHIPYYINQPSPQSVALHLLD*ILQGTG Trigger: CCCGGTCCCTTGTAGGATCCAGTCTAGAAGGTGCAG...TGCCACAGACTGTGGTGAGGGCTGGTTAATGTAGTATGGTATATGCACAAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR CCA 90 bp | AAAAACACATTTCCAACATGTATAGCAACAACTTCCATAGGTTTGGGGACAGTGCCTCACCACAGTCTGTaGCAGCAGCCCTCCCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: KNTFPTCIATTSIGLGTVPHHSL*QQPSLS Trigger: TGAGAGGGAGGGCTGCTGCCACAGACTGTGGTGAGG...CACTGTCCCCAAACCTATGGAAGTTGTTGCTATACATGTTGGAAATGTGTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR TCA 90 bp | TGTTTTACCAAGACTGAAGGCAAATGTGTCGTGATGATGCTTCTAAATAGCTGTGGTCCTCCTCTCTGCTaGGGGTCCCAATTCAACATC | + |
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Preference number: 4 (lower is better) Translates to: CFTKTEGKCVVMMLLNSCGPPLC*GSQFNI Trigger: GATGTTGAATTGGGACCCTCAGCAGAGAGGAGGACC...ACAGCTATTTAGAAGCATCATCACGACACATTTGCCTTCAGTCTTGGTAAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR TCA 90 bp | GAAAAACACATTTCCAACATGTATAGCAACAACTTCCATAGGTTTGGGGACAGTTTGAGCACACGGTCCTaGCTCTGCACAGTGTGCACA | + |
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Preference number: 4 (lower is better) Translates to: EKHISNMYSNNFHRFGDSLSTRS*LCTVCT Trigger: TGTGCACACTGTGCAGAGTCAGGACCGTGTGCTCAA...ACTGTCCCCAAACCTATGGAAGTTGTTGCTATACATGTTGGAAATGTGTTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR TCA 90 bp | AAAAACACATTTCCAACATGTATAGCAACAACTTCCATAGGTTTGGGGACAGTGGACCAAACAGCTCCTTaGGCACACGGTCCTGACTCT | + |
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Preference number: 4 (lower is better) Translates to: KNTFPTCIATTSIGLGTVDQTAP*AHGPDS Trigger: AGAGTCAGGACCGTGTGCTCAAGGAGCTGTTTGGTC...CACTGTCCCCAAACCTATGGAAGTTGTTGCTATACATGTTGGAAATGTGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR TCA 90 bp | GAAAAACACATTTCCAACATGTATAGCAACAACTTCCATAGGTTTGGGGACAGTATGATCATGTTCTGCTaGAGTCGGGGGCAGCCATGC | + |
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Preference number: 4 (lower is better) Translates to: EKHISNMYSNNFHRFGDSMIMFC*SRGQPC Trigger: GCATGGCTGCCCCCGACTTCAGCAGAACATGATCAT...ACTGTCCCCAAACCTATGGAAGTTGTTGCTATACATGTTGGAAATGTGTTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR CCA 90 bp | AAAAACACATTTCCAACATGTATAGCAACAACTTCCATAGGTTTGGGGACAGTGTCAAGTTCCCGATGCTaGTACAGACAGACGTTCCCG | + |
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Preference number: 4 (lower is better) Translates to: KNTFPTCIATTSIGLGTVSSSRC*YRQTFP Trigger: CGGGAACGTCTGTCTGTACCAGCATCGGGAACTTGA...CACTGTCCCCAAACCTATGGAAGTTGTTGCTATACATGTTGGAAATGTGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR TCA 90 bp | TGTTTTACCAAGACTGAAGGCAAATGTGTCGTGATGATGCTTCTAAATAGCTGTCCTCCAGGTATCCAATaGCACCAACCTCAGCATAGT | + |
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Preference number: 4 (lower is better) Translates to: CFTKTEGKCVVMMLLNSCPPGIQ*HQPQHS Trigger: ACTATGCTGAGGTTGGTGTCATTGGATACCTGGAGG...ACAGCTATTTAGAAGCATCATCACGACACATTTGCCTTCAGTCTTGGTAAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR TCA 90 bp | AGTTTTGTGCATATACCATACTACATTAACCAGCCCTCACCACAGTCTGTGGCATCTTCTGTAGCTCCATaGTTTCAGCATGCAAAGACA | + |
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Preference number: 4 (lower is better) Translates to: SFVHIPYYINQPSPQSVASSVAP*FQHAKT Trigger: TGTCTTTGCATGCTGAAATCATGGAGCTACAGAAGA...TGCCACAGACTGTGGTGAGGGCTGGTTAATGTAGTATGGTATATGCACAAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR TCA 90 bp | AGTTTTGTGCATATACCATACTACATTAACCAGCCCTCACCACAGTCTGTGGCAAGGAGTTACCACACATaGCAGAGAATGATCATGTTC | + |
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Preference number: 4 (lower is better) Translates to: SFVHIPYYINQPSPQSVARSYHT*QRMIMF Trigger: GAACATGATCATTCTCTGTCATGTGTGGTAACTCCT...TGCCACAGACTGTGGTGAGGGCTGGTTAATGTAGTATGGTATATGCACAAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR TCA 90 bp | TGTTTTACCAAGACTGAAGGCAAATGTGTCGTGATGATGCTTCTAAATAGCTGTGAAGTCTCCCCATCTTaGGGAGTTACCACACATGAC | + |
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Preference number: 4 (lower is better) Translates to: CFTKTEGKCVVMMLLNSCEVSPS*GVTTHD Trigger: GTCATGTGTGGTAACTCCTCAAGATGGGGAGACTTC...ACAGCTATTTAGAAGCATCATCACGACACATTTGCCTTCAGTCTTGGTAAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR TCA 90 bp | AGTTTTGTGCATATACCATACTACATTAACCAGCCCTCACCACAGTCTGTGGCAAGCCATTTCTTCCATTaGCTGATGTCTGAAGAATGG | + |
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Preference number: 4 (lower is better) Translates to: SFVHIPYYINQPSPQSVASHFFH*LMSEEW Trigger: CCATTCTTCAGACATCAGTCAATGGAAGAAATGGCT...TGCCACAGACTGTGGTGAGGGCTGGTTAATGTAGTATGGTATATGCACAAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR TCA 90 bp | ATGGGGGAAAAACACATTTCCAACATGTATAGCAACAACTTCCATAGGTTTGGGTACACCAACTCCTTATaGTGCCAGGAAGAGAACCTG | + |
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Preference number: 4 (lower is better) Translates to: MGEKHISNMYSNNFHRFGYTNSL*CQEENL Trigger: CAGGTTCTCTTCCTGGCATCATAAGGAGTTGGTGTA...CCCAAACCTATGGAAGTTGTTGCTATACATGTTGGAAATGTGTTTTTCCCCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR GCA 90 bp | ATGGGGGAAAAACACATTTCCAACATGTATAGCAACAACTTCCATAGGTTTGGGAGATCAAGTTCCCGATaGTGGTACAGACAGACGTTC | + |
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Preference number: 4 (lower is better) Translates to: MGEKHISNMYSNNFHRFGRSSSR*WYRQTF Trigger: GAACGTCTGTCTGTACCAGCATCGGGAACTTGATCT...CCCAAACCTATGGAAGTTGTTGCTATACATGTTGGAAATGTGTTTTTCCCCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR CCA 90 bp | ATGGGGGAAAAACACATTTCCAACATGTATAGCAACAACTTCCATAGGTTTGGGATTCTCAAAGAGCTCTaGGGCCAGATACTGCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: MGEKHISNMYSNNFHRFGILKEL*GQILQC Trigger: ACACTGCAGTATCTGGCCCCAGAGCTCTTTGAGAAT...CCCAAACCTATGGAAGTTGTTGCTATACATGTTGGAAATGTGTTTTTCCCCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR TCA 90 bp | AGATTGCAAGCAAATGAATTTTGTCACCAAGCTTATGGAAACCTTGTTTTCAGAAGCCATGCTGATGTCTaGGGGGTTACTGCACCTTCT | + |
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Preference number: 4 (lower is better) Translates to: RLQANEFCHQAYGNLVFRSHADV*GVTAPS Trigger: AGAAGGTGCAGTAACCCCTCAGACATCAGCATGGCT...TCTGAAAACAAGGTTTCCATAAGCTTGGTGACAAAATTCATTTGCTTGCAATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR GCA 90 bp | TGTTTTACCAAGACTGAAGGCAAATGTGTCGTGATGATGCTTCTAAATAGCTGTAGACACATAGTGCACTaGTTCAGCCCACACTTTACG | + |
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Preference number: 4 (lower is better) Translates to: CFTKTEGKCVVMMLLNSCRHIVH*FSPHFT Trigger: CGTAAAGTGTGGGCTGAAGCAGTGCACTATGTGTCT...ACAGCTATTTAGAAGCATCATCACGACACATTTGCCTTCAGTCTTGGTAAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR CCA 90 bp | AGTTTTGTGCATATACCATACTACATTAACCAGCCCTCACCACAGTCTGTGGCAAGGCCTTTACAACATTaGCATGGTTCAACTTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: SFVHIPYYINQPSPQSVARPLQH*HGSTSS Trigger: TGAAGAAGTTGAACCATGCCAATGTTGTAAAGGCCT...TGCCACAGACTGTGGTGAGGGCTGGTTAATGTAGTATGGTATATGCACAAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR CCA 90 bp | AAAAACACATTTCCAACATGTATAGCAACAACTTCCATAGGTTTGGGGACAGTGAACACATTGAGAGGCTaGTTTCCGAGGATCCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: KNTFPTCIATTSIGLGTVNTLRG*FPRIQR Trigger: TCTCTGGATCCTCGGAAACCAGCCTCTCAATGTGTT...CACTGTCCCCAAACCTATGGAAGTTGTTGCTATACATGTTGGAAATGTGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR CCA 90 bp | AGTTTTGTGCATATACCATACTACATTAACCAGCCCTCACCACAGTCTGTGGCAGCTTATATAGATCAATaGCACGCTGTTCCAGAGATT | + |
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Preference number: 4 (lower is better) Translates to: SFVHIPYYINQPSPQSVAAYIDQ*HAVPEI Trigger: AATCTCTGGAACAGCGTGCCATTGATCTATATAAGC...TGCCACAGACTGTGGTGAGGGCTGGTTAATGTAGTATGGTATATGCACAAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR TCA 90 bp | AAAAACACATTTCCAACATGTATAGCAACAACTTCCATAGGTTTGGGGACAGTGCGAGACTGTAGTGAATaGAGACTTTCATCAGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: KNTFPTCIATTSIGLGTVRDCSE*RLSSGG Trigger: ACCACCTGATGAAAGTCTTCATTCACTACAGTCTCG...CACTGTCCCCAAACCTATGGAAGTTGTTGCTATACATGTTGGAAATGTGTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR TCA 90 bp | ATGGGGGAAAAACACATTTCCAACATGTATAGCAACAACTTCCATAGGTTTGGGTGCAAAGACATAATCTaGTCCTCCAGGTATCCAATG | + |
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Preference number: 4 (lower is better) Translates to: MGEKHISNMYSNNFHRFGCKDII*SSRYPM Trigger: CATTGGATACCTGGAGGATCAGATTATGTCTTTGCA...CCCAAACCTATGGAAGTTGTTGCTATACATGTTGGAAATGTGTTTTTCCCCCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR GCA 90 bp | ATGGGGGAAAAACACATTTCCAACATGTATAGCAACAACTTCCATAGGTTTGGGGTCCCTGAAAGAGCCTaGTATAGTCTTCTTTTAGTC | + |
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Preference number: 4 (lower is better) Translates to: MGEKHISNMYSNNFHRFGVPERA*YSLLLV Trigger: GACTAAAAGAAGACTATAGCAGGCTCTTTCAGGGAC...CCCAAACCTATGGAAGTTGTTGCTATACATGTTGGAAATGTGTTTTTCCCCCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR TCA 90 bp | AAAAACACATTTCCAACATGTATAGCAACAACTTCCATAGGTTTGGGGACAGTGACACATGACAGAGAATaGTCATGTTCTGCTGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: KNTFPTCIATTSIGLGTVTHDRE*SCSAEV Trigger: GACTTCAGCAGAACATGATCATTCTCTGTCATGTGT...CACTGTCCCCAAACCTATGGAAGTTGTTGCTATACATGTTGGAAATGTGTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR TCA 90 bp | GAAAAACACATTTCCAACATGTATAGCAACAACTTCCATAGGTTTGGGGACAGTACACAATCCCTTCGATaGGAAGGGGATACTGTTAAA | + |
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Preference number: 4 (lower is better) Translates to: EKHISNMYSNNFHRFGDSTQSLR*EGDTVK Trigger: TTTAACAGTATCCCCTTCTCATCGAAGGGATTGTGT...ACTGTCCCCAAACCTATGGAAGTTGTTGCTATACATGTTGGAAATGTGTTTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR GCA 90 bp | AGATTGCAAGCAAATGAATTTTGTCACCAAGCTTATGGAAACCTTGTTTTCAGATCTGGGGCCAGATACTaGAGTGTTCCCACAAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: RLQANEFCHQAYGNLVFRSGARY*SVPTKD Trigger: ATCTTTTGTGGGAACACTGCAGTATCTGGCCCCAGA...TCTGAAAACAAGGTTTCCATAAGCTTGGTGACAAAATTCATTTGCTTGCAATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR GCA 90 bp | ATGGGGGAAAAACACATTTCCAACATGTATAGCAACAACTTCCATAGGTTTGGGTTCTTAATCTTCTCATaGCAGGTAAATGGCTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: MGEKHISNMYSNNFHRFGFLIFS*QVNGCR Trigger: TCTGCAGCCATTTACCTGGCATGAGAAGATTAAGAA...CCCAAACCTATGGAAGTTGTTGCTATACATGTTGGAAATGTGTTTTTCCCCCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR GCA 90 bp | AGATTGCAAGCAAATGAATTTTGTCACCAAGCTTATGGAAACCTTGTTTTCAGAATCCCATACGTCATCTaGTCGCTGTATCTCTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: RLQANEFCHQAYGNLVFRIPYVI*SLYLSK Trigger: CTTGGAGAGATACAGCGAGCAGATGACGTATGGGAT...TCTGAAAACAAGGTTTCCATAAGCTTGGTGACAAAATTCATTTGCTTGCAATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR GCA 90 bp | AAAAACACATTTCCAACATGTATAGCAACAACTTCCATAGGTTTGGGGACAGTGTTTTCACCATCTCTGTaGTGTCACTGTAGGAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: KNTFPTCIATTSIGLGTVFSPSL*CHCRSD Trigger: ATCACTCCTACAGTGACAGCACAGAGATGGTGAAAA...CACTGTCCCCAAACCTATGGAAGTTGTTGCTATACATGTTGGAAATGTGTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR GCA 90 bp | GAAAAACACATTTCCAACATGTATAGCAACAACTTCCATAGGTTTGGGGACAGTGCCCTGTTCCTCATTTaGCTCATGAATAATAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: EKHISNMYSNNFHRFGDSALFLI*LMNNSA Trigger: AGCACTATTATTCATGAGGCAAATGAGGAACAGGGC...ACTGTCCCCAAACCTATGGAAGTTGTTGCTATACATGTTGGAAATGTGTTTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR CCA 90 bp | TGTTTTACCAAGACTGAAGGCAAATGTGTCGTGATGATGCTTCTAAATAGCTGTATCGTTCTCTGTTTTTaGTACTTAGCTCTAGGCGAC | + |
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Preference number: 4 (lower is better) Translates to: CFTKTEGKCVVMMLLNSCIVLCF*YLALGD Trigger: GTCGCCTAGAGCTAAGTACCAAAAACAGAGAACGAT...ACAGCTATTTAGAAGCATCATCACGACACATTTGCCTTCAGTCTTGGTAAAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR TCA 90 bp | TGTTTTACCAAGACTGAAGGCAAATGTGTCGTGATGATGCTTCTAAATAGCTGTCAAAGGCTATTTGGTTaGGGTAAATGGCTACTAAAC | + |
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Preference number: 4 (lower is better) Translates to: CFTKTEGKCVVMMLLNSCQRLFG*GKWLLN Trigger: GTTTAGTAGCCATTTACCTCAACCAAATAGCCTTTG...ACAGCTATTTAGAAGCATCATCACGACACATTTGCCTTCAGTCTTGGTAAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR TCA 90 bp | AGATTGCAAGCAAATGAATTTTGTCACCAAGCTTATGGAAACCTTGTTTTCAGAAACAACTTGCTCAAATaGCCAAACAGCTCCTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: RLQANEFCHQAYGNLVFRNNLLK*PNSSLS Trigger: GCTCAAGGAGCTGTTTGGTCATTTGAGCAAGTTGTT...TCTGAAAACAAGGTTTCCATAAGCTTGGTGACAAAATTCATTTGCTTGCAATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR TCA 90 bp | CACACTAAATGGGATAAAAAGATTCAAGGTCAGTTCAGATTAGATTGCAAGCAATTCTATCATTTGTGCTaGAGTCTCCCCATCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: HTKWDKKIQGQFRLDCKQFYHLC*SLPILR Trigger: CCTCAAGATGGGGAGACTTCAGCACAAATGATAGAA...TTGCTTGCAATCTAATCTGAACTGACCTTGAATCTTTTTATCCCATTTAGTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR TCA 90 bp | CACACTAAATGGGATAAAAAGATTCAAGGTCAGTTCAGATTAGATTGCAAGCAAGGGACAGTGAACAAGTaGCAACTCATTCTGTTAACC | + |
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Preference number: 4 (lower is better) Translates to: HTKWDKKIQGQFRLDCKQGTVNK*QLILLT Trigger: GGTTAACAGAATGAGTTGTCACTTGTTCACTGTCCC...TTGCTTGCAATCTAATCTGAACTGACCTTGAATCTTTTTATCCCATTTAGTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR GCA 90 bp | ATGGGGGAAAAACACATTTCCAACATGTATAGCAACAACTTCCATAGGTTTGGGAGATCAATAATCTTCTaGTTACAGCCCAACAACTTG | + |
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Preference number: 4 (lower is better) Translates to: MGEKHISNMYSNNFHRFGRSIIF*LQPNNL Trigger: CAAGTTGTTGGGCTGTAAGCAGAAGATTATTGATCT...CCCAAACCTATGGAAGTTGTTGCTATACATGTTGGAAATGTGTTTTTCCCCCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR GCA 90 bp | GAAAAACACATTTCCAACATGTATAGCAACAACTTCCATAGGTTTGGGGACAGTGATTCATCATACTATTaGCCTGTTCCTCATTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: EKHISNMYSNNFHRFGDSDSSYY*PVPHLP Trigger: AGGCAAATGAGGAACAGGGCAATAGTATGATGAATC...ACTGTCCCCAAACCTATGGAAGTTGTTGCTATACATGTTGGAAATGTGTTTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR CCA 90 bp | TGTTTTACCAAGACTGAAGGCAAATGTGTCGTGATGATGCTTCTAAATAGCTGTGTAGCCAGTTTTCCATaGGTTCTACTACTAAACTAC | + |
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Preference number: 4 (lower is better) Translates to: CFTKTEGKCVVMMLLNSCVASFP*VLLLNY Trigger: GTAGTTTAGTAGTAGAACCCATGGAAAACTGGCTAC...ACAGCTATTTAGAAGCATCATCACGACACATTTGCCTTCAGTCTTGGTAAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR TCA 90 bp | CACACTAAATGGGATAAAAAGATTCAAGGTCAGTTCAGATTAGATTGCAAGCAAAATTTTCTGGTTTGTTaGGCAGCTTTCGGAGATCTC | + |
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Preference number: 4 (lower is better) Translates to: HTKWDKKIQGQFRLDCKQNFLVC*AAFGDL Trigger: GAGATCTCCGAAAGCTGCTCAACAAACCAGAAAATT...TTGCTTGCAATCTAATCTGAACTGACCTTGAATCTTTTTATCCCATTTAGTGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR TCA 90 bp | GAAAAACACATTTCCAACATGTATAGCAACAACTTCCATAGGTTTGGGGACAGTATTTCTTCCATTGACTaGTGTCTGAAGAATGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: EKHISNMYSNNFHRFGDSISSID*CLKNGF Trigger: GAAACCATTCTTCAGACATCAGTCAATGGAAGAAAT...ACTGTCCCCAAACCTATGGAAGTTGTTGCTATACATGTTGGAAATGTGTTTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR GCA 90 bp | CACACTAAATGGGATAAAAAGATTCAAGGTCAGTTCAGATTAGATTGCAAGCAATACAGCCCAACAACTTaGTCAAATGACCAAACAGCT | + |
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Preference number: 4 (lower is better) Translates to: HTKWDKKIQGQFRLDCKQYSPTT*SNDQTA Trigger: AGCTGTTTGGTCATTTGAGCAAGTTGTTGGGCTGTA...TTGCTTGCAATCTAATCTGAACTGACCTTGAATCTTTTTATCCCATTTAGTGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR CCA 90 bp | TGTTTTACCAAGACTGAAGGCAAATGTGTCGTGATGATGCTTCTAAATAGCTGTATAATCTGGATTTCATaGCACCATCGTTCTCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: CFTKTEGKCVVMMLLNSCIIWIS*HHRSLF Trigger: AAACAGAGAACGATGGTGCCATGAAATCCAGATTAT...ACAGCTATTTAGAAGCATCATCACGACACATTTGCCTTCAGTCTTGGTAAAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR CCA 90 bp | GAAAAACACATTTCCAACATGTATAGCAACAACTTCCATAGGTTTGGGGACAGTAACTTCTTCATAATCTaGATTTCATGGCACCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: EKHISNMYSNNFHRFGDSNFFII*ISWHHR Trigger: ACGATGGTGCCATGAAATCCAGATTATGAAGAAGTT...ACTGTCCCCAAACCTATGGAAGTTGTTGCTATACATGTTGGAAATGTGTTTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR CCA 90 bp | AAAAACACATTTCCAACATGTATAGCAACAACTTCCATAGGTTTGGGGACAGTGTCCAATAATCAACAGTaGCTGTGTAAGGCTTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: KNTFPTCIATTSIGLGTVSNNQQ*LCKAYS Trigger: AGAATAAGCCTTACACAGCCACTGTTGATTATTGGA...CACTGTCCCCAAACCTATGGAAGTTGTTGCTATACATGTTGGAAATGTGTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370397.8 |
||
| CDS-3UTR CCA 90 bp | GAAAAACACATTTCCAACATGTATAGCAACAACTTCCATAGGTTTGGGGACAGTACTTCTGGAAGCAAATaGCCCTTCATATACAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: EKHISNMYSNNFHRFGDSTSGSK*PFIYSF Trigger: AAAACTGTATATGAAGGGCCATTTGCTTCCAGAAGT...ACTGTCCCCAAACCTATGGAAGTTGTTGCTATACATGTTGGAAATGTGTTTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR CCA 90 bp | TGTTTTACCAAGACTGAAGGCAAATGTGTCGTGATGATGCTTCTAAATAGCTGTAATCAGATAAACTTCTaGAAGCAAATGGCCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CFTKTEGKCVVMMLLNSCNQINF*KQMALH Trigger: ATGAAGGGCCATTTGCTTCCAGAAGTTTATCTGATT...ACAGCTATTTAGAAGCATCATCACGACACATTTGCCTTCAGTCTTGGTAAAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370397.8 |
||
| CDS-3UTR TCA 90 bp | AGATTGCAAGCAAATGAATTTTGTCACCAAGCTTATGGAAACCTTGTTTTCAGATTTCCACCAACATCCTaGAGAACTATGTTTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RLQANEFCHQAYGNLVFRFPPTS*RTMFSG Trigger: ACCTGAAAACATAGTTCTTCAGGATGTTGGTGGAAA...TCTGAAAACAAGGTTTCCATAAGCTTGGTGACAAAATTCATTTGCTTGCAATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370397.8 |
||
| CDS-3UTR TCA 90 bp | AGATTGCAAGCAAATGAATTTTGTCACCAAGCTTATGGAAACCTTGTTTTCAGAAGAAATTCCTGTCTCTaGAAGAAGTTCTTGAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: RLQANEFCHQAYGNLVFRRNSCL*KKFLRT Trigger: GGTTCTCAAGAACTTCTTTCAGAGACAGGAATTTCT...TCTGAAAACAAGGTTTCCATAAGCTTGGTGACAAAATTCATTTGCTTGCAATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR GCA 90 bp | AAAAACACATTTCCAACATGTATAGCAACAACTTCCATAGGTTTGGGGACAGTGGCGACAAGACTTAATTaGTATTTTGAGATCAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KNTFPTCIATTSIGLGTVATRLN*YFEIKF Trigger: GAACTTGATCTCAAAATAGCAATTAAGTCTTGTCGC...CACTGTCCCCAAACCTATGGAAGTTGTTGCTATACATGTTGGAAATGTGTTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370397.8 |
||
| CDS-3UTR GCA 90 bp | TGTTTTACCAAGACTGAAGGCAAATGTGTCGTGATGATGCTTCTAAATAGCTGTGGTCTGTGTTTTAACTaGTTATATAGATCAATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CFTKTEGKCVVMMLLNSCGLCFN*LYRSMA Trigger: TGCCATTGATCTATATAAGCAGTTAAAACACAGACC...ACAGCTATTTAGAAGCATCATCACGACACATTTGCCTTCAGTCTTGGTAAAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR GCA 90 bp | AGATTGCAAGCAAATGAATTTTGTCACCAAGCTTATGGAAACCTTGTTTTCAGATTCTGCCTTTTTCCCTaGATGAACATGACAGTATTG | + |
|
Preference number: 4 (lower is better) Translates to: RLQANEFCHQAYGNLVFRFCLFP*MNMTVL Trigger: CAATACTGTCATGTTCATGCAGGGAAAAAGGCAGAA...TCTGAAAACAAGGTTTCCATAAGCTTGGTGACAAAATTCATTTGCTTGCAATCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR CCA 90 bp | AGATTGCAAGCAAATGAATTTTGTCACCAAGCTTATGGAAACCTTGTTTTCAGATCCACAACAATTTTCTaGTTTGTTGAGCAGCTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: RLQANEFCHQAYGNLVFRSTTIF*FVEQLS Trigger: CGAAAGCTGCTCAACAAACCAGAAAATTGTTGTGGA...TCTGAAAACAAGGTTTCCATAAGCTTGGTGACAAAATTCATTTGCTTGCAATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370397.8 |
||
| CDS-3UTR CCA 90 bp | AAAAACACATTTCCAACATGTATAGCAACAACTTCCATAGGTTTGGGGACAGTGTACATTCAAATACCATaGTCCCAAAGCTCCAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: KNTFPTCIATTSIGLGTVYIQIP*SQSSNN Trigger: ATTATTGGAGCTTTGGGACCATGGTATTTGAATGTA...CACTGTCCCCAAACCTATGGAAGTTGTTGCTATACATGTTGGAAATGTGTTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370397.8 |
||
| CDS-3UTR CCA 90 bp | AGATTGCAAGCAAATGAATTTTGTCACCAAGCTTATGGAAACCTTGTTTTCAGAACGCAGCTGTATAATTaGAAGCTGTATTTTGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RLQANEFCHQAYGNLVFRTQLYN*KLYFAV Trigger: GACAGCAAAATACAGCTTCCAATTATACAGCTGCGT...TCTGAAAACAAGGTTTCCATAAGCTTGGTGACAAAATTCATTTGCTTGCAATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR CCA 90 bp | AGATTGCAAGCAAATGAATTTTGTCACCAAGCTTATGGAAACCTTGTTTTCAGATTGTCACCAAGCTTATaGAAACCTTGTTTTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLQANEFCHQAYGNLVFRLSPSL*KPCFQS Trigger: GCTCTGAAAACAAGGTTTCCATAAGCTTGGTGACAA...TCTGAAAACAAGGTTTCCATAAGCTTGGTGACAAAATTCATTTGCTTGCAATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR TCA 90 bp | CACACTAAATGGGATAAAAAGATTCAAGGTCAGTTCAGATTAGATTGCAAGCAATCCTCATTTGCCTCATaGATAATAGTGCTTAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: HTKWDKKIQGQFRLDCKQSSFAS*IIVLKW Trigger: CCATTTAAGCACTATTATTCATGAGGCAAATGAGGA...TTGCTTGCAATCTAATCTGAACTGACCTTGAATCTTTTTATCCCATTTAGTGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR CAA 90 bp | AGTTTTGTGCATATACCATACTACATTAACCAGCCCTCACCACAGTCTGTGGCACCTCAGGTTCCACAGTaGTTCCAAGGCCGGTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SFVHIPYYINQPSPQSVAPQVPQ*FQGRFR Trigger: CCGGAACCGGCCTTGGAACAACTGTGGAACCTGAGG...TGCCACAGACTGTGGTGAGGGCTGGTTAATGTAGTATGGTATATGCACAAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS TCA 90 bp | CATCTTGGCTGCTTCAAAGTAAGGTCAACAGGTCCTCCTCTCTGCTaGGGGTCCCAATTCAACATCAACTGTAGCCAGTTTTCCATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: HLGCFKVRSTGPPLC*GSQFNINCSQFSMG Trigger: ACCCATGGAAAACTGGCTACAGTTGATGTTGAATTGGGACCCTCAGCAGAGAGGAGGACCTGTTGACCTTACTTTGAAGCAGCCAAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS GCA 90 bp | CAACAACTTGCTGGAGAGATTAAATCAGTGTCAGACACTTTCACATaGCCCAAGACTGTACACCATATTCCCAAAACCCAGCTGAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QQLAGEIKSVSDTFT*PKTVHHIPKTQLRK Trigger: TTTCCTCAGCTGGGTTTTGGGAATATGGTGTACAGTCTTGGGGCATGTGAAAGTGTCTGACACTGATTTAATCTCTCCAGCAAGTTGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590930.5 |
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| CDS GCA 90 bp | TTACTGAGGGCCACTTCCACCTTAGGGAGTAGATCAATAATCTTCTaGTTACAGCCCAACAACTTGCTGGAGAGATTAAATCAGTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLRATSTLGSRSIIF*LQPNNLLERLNQCQ Trigger: CTGACACTGATTTAATCTCTCCAGCAAGTTGTTGGGCTGTAAGCAGAAGATTATTGATCTACTCCCTAAGGTGGAAGTGGCCCTCAGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590930.5 |
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| CDS TCA 90 bp | ACATTGAGAGGCTGGTTTCCGAGGATCCAGAGAAATTCCTGTCTCTaGAAGAAGTTCTTGAGAACCAGTATTTATTCCAGTTTCACGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TLRGWFPRIQRNSCL*KKFLRTSIYSSFTL Trigger: GAGCGTGAAACTGGAATAAATACTGGTTCTCAAGAACTTCTTTCAGAGACAGGAATTTCTCTGGATCCTCGGAAACCAGCCTCTCAATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS GCA 90 bp | ATTTGTGCTGAAGTCTCCCTGATATCAGCTTGCCTTCCTGCCATGTaGTTTTCTCTCATAAAAGTAGAGTACAGAATGTGCAACTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: ICAEVSLISACLPAM*FSLIKVEYRMCNCM Trigger: CATGCAGTTGCACATTCTGTACTCTACTTTTATGAGAGAAAAGCACATGGCAGGAAGGCAAGCTGATATCAGGGAGACTTCAGCACAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590930.5 |
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| CDS-3UTR CAA 90 bp | AGTTTTGTGCATATACCATACTACATTAACCAGCCCTCACCACAGTCTGTGGCACAGAACAGTATTCCATaGCTAGAAGAGGCACATCAT | + |
|
Preference number: 5 (lower is better) Translates to: SFVHIPYYINQPSPQSVAQNSIP*LEEAHH Trigger: ATGATGTGCCTCTTCTAGCAATGGAATACTGTTCTG...TGCCACAGACTGTGGTGAGGGCTGGTTAATGTAGTATGGTATATGCACAAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS TCA 90 bp | GGTTTCCGAGGATCCAGAGAAATTCCTGTCTCTGAAAGAAGTTCTTaGGAACCAGTATTTATTCCAGTTTCACGCTCAATACGAGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: GFRGSREIPVSERSS*EPVFIPVSRSIRDC Trigger: ACAGTCTCGTATTGAGCGTGAAACTGGAATAAATACTGGTTCTCAAGAACTTCTTTCAGAGACAGGAATTTCTCTGGATCCTCGGAAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR CAA 90 bp | ATGGGGGAAAAACACATTTCCAACATGTATAGCAACAACTTCCATAGGTTTGGGCAGGCCTTTACAACATaGGCATGGTTCAACTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: MGEKHISNMYSNNFHRFGQAFTT*AWFNFF Trigger: GAAGAAGTTGAACCATGCCAATGTTGTAAAGGCCTG...CCCAAACCTATGGAAGTTGTTGCTATACATGTTGGAAATGTGTTTTTCCCCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR CAA 90 bp | AGTTTTGTGCATATACCATACTACATTAACCAGCCCTCACCACAGTCTGTGGCAAACCCTTGGGGCAAGTaGTTTCAGAATTATGAAATT | + |
|
Preference number: 5 (lower is better) Translates to: SFVHIPYYINQPSPQSVANPWGK*FQNYEI Trigger: AATTTCATAATTCTGAAACAACTTGCCCCAAGGGTT...TGCCACAGACTGTGGTGAGGGCTGGTTAATGTAGTATGGTATATGCACAAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS TCA 90 bp | AGATCTCCTCCAGAACAGTATTCCATTGCTAGAAGAGGCACATCATaGATCAAAATATTCAATTCTTCAGGAACATCACAGGCCTTTACA | + |
|
Preference number: 5 (lower is better) Translates to: RSPPEQYSIARRGTS*IKIFNSSGTSQAFT Trigger: TGTAAAGGCCTGTGATGTTCCTGAAGAATTGAATATTTTGATTCATGATGTGCCTCTTCTAGCAATGGAATACTGTTCTGGAGGAGATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS TCA 90 bp | ACATGTATAGCAACAACTTCCATAGGTTTGGGGACAGTGAACAAGTaGCAACTCATTCTGTTAACCAACTCCAATCAAGATTCATCATAC | + |
|
Preference number: 5 (lower is better) Translates to: TCIATTSIGLGTVNK*QLILLTNSNQDSSY Trigger: GTATGATGAATCTTGATTGGAGTTGGTTAACAGAATGAGTTGTCACTTGTTCACTGTCCCCAAACCTATGGAAGTTGTTGCTATACATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370397.8 ENST00000588656.1 ENST00000590930.5 |
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| CDS TCA 90 bp | GAAGACTACCTTAACAACTACTGCCTCATTCCTATACCACTGCTATaGAAACACAGCTATCTATTGTTACAAAGTAAACCCACCCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: EDYLNNYCLIPIPLL*KHSYLLLQSKPTHL Trigger: AAGATGGGTGGGTTTACTTTGTAACAATAGATAGCTGTGTTTTCATAGCAGTGGTATAGGAATGAGGCAGTAGTTGTTAAGGTAGTCTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590930.5 |
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| CDS-3UTR CAA 90 bp | AAAAACACATTTCCAACATGTATAGCAACAACTTCCATAGGTTTGGGGACAGTGTGTACACAGACTTCCTaGATCAACATCTTTGGCATA | + |
|
Preference number: 5 (lower is better) Translates to: KNTFPTCIATTSIGLGTVCTQTS*INIFGI Trigger: TATGCCAAAGATGTTGATCAAGGAAGTCTGTGTACA...CACTGTCCCCAAACCTATGGAAGTTGTTGCTATACATGTTGGAAATGTGTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR CAA 90 bp | AGATTGCAAGCAAATGAATTTTGTCACCAAGCTTATGGAAACCTTGTTTTCAGACAATTTTCTGGTTTGTaGAGCAGCTTTCGGAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: RLQANEFCHQAYGNLVFRQFSGL*SSFRRS Trigger: AGATCTCCGAAAGCTGCTCAACAAACCAGAAAATTG...TCTGAAAACAAGGTTTCCATAAGCTTGGTGACAAAATTCATTTGCTTGCAATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS TCA 90 bp | CCAGTATTTATTCCAGTTTCACGCTCAATACGAGACTGTAGTGAATaGAGACTTTCATCAGGTGGTAACAGAAAAGAAATTATCTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PVFIPVSRSIRDCSE*RLSSGGNRKEIIFA Trigger: TGCAAAGATAATTTCTTTTCTGTTACCACCTGATGAAAGTCTTCATTCACTACAGTCTCGTATTGAGCGTGAAACTGGAATAAATACTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR CAA 90 bp | AGATTGCAAGCAAATGAATTTTGTCACCAAGCTTATGGAAACCTTGTTTTCAGAGACTTAATTGCTATTTaGAGATCAAGTTCCCGATGC | + |
|
Preference number: 5 (lower is better) Translates to: RLQANEFCHQAYGNLVFRDLIAI*RSSSRC Trigger: GCATCGGGAACTTGATCTCAAAATAGCAATTAAGTC...TCTGAAAACAAGGTTTCCATAAGCTTGGTGACAAAATTCATTTGCTTGCAATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS-3UTR CAA 90 bp | AGATTGCAAGCAAATGAATTTTGTCACCAAGCTTATGGAAACCTTGTTTTCAGAAACTACAAAGGCTATTaGGTTGAGGTAAATGGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: RLQANEFCHQAYGNLVFRNYKGY*VEVNGY Trigger: GTAGCCATTTACCTCAACCAAATAGCCTTTGTAGTT...TCTGAAAACAAGGTTTCCATAAGCTTGGTGACAAAATTCATTTGCTTGCAATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS TCA 72 bp | TGTTCTGCTGAAGTCGGGGGCAGCCATGCTGATGTCTaGGGGGTTACTGCACCTTCTAGACTGGATCCTACA | + |
|
Preference number: 6 (lower is better) Translates to: CSAEVGGSHADV*GVTAPSRLDPT Trigger: TGTAGGATCCAGTCTAGAAGGTGCAGTAACCCCTCAGACATCAGCATGGCTGCCCCCGACTTCAGCAGAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000370397.8 ENST00000585551.1 ENST00000590930.5 |
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| CDS TCA 72 bp | AGCCCAACAACTTGCTCAAATGACCAAACAGCTCCTTaGGCACACGGTCCTGACTCTGCACAGTGTGCACAA | + |
|
Preference number: 6 (lower is better) Translates to: SPTTCSNDQTAP*AHGPDSAQCAQ Trigger: TTGTGCACACTGTGCAGAGTCAGGACCGTGTGCTCAAGGAGCTGTTTGGTCATTTGAGCAAGTTGTTGGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS CCA 72 bp | CTTAAAGCCAACTGGCAGCAGCCAGATACCCTCAAATaGGATGGCTGTTGGTCACAATGGGTTCTACAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LKANWQQPDTLK*DGCWSQWVLQF Trigger: AAACTGTAGAACCCATTGTGACCAACAGCCATCCCATTTGAGGGTATCTGGCTGCTGCCAGTTGGCTTTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590930.5 |
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| CDS CCA 72 bp | GTGCAACTGCATGACCTCCTGAGCAGTGATGTAACATaGCTGCACTTCTGCAAAACTAATTATGGGCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: VQLHDLLSSDVT*LHFCKTNYGQS Trigger: GCTCTGCCCATAATTAGTTTTGCAGAAGTGCAGCCATGTTACATCACTGCTCAGGAGGTCATGCAGTTGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590930.5 |
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| CDS TCA 72 bp | TGCTTCAAAGTAAGGTCAACAGGTCCTCCTCTCTGCTaGGGGTCCCAATTCAACATCAACTGTAGCCAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: CFKVRSTGPPLC*GSQFNINCSQF Trigger: AAACTGGCTACAGTTGATGTTGAATTGGGACCCTCAGCAGAGAGGAGGACCTGTTGACCTTACTTTGAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS GCA 72 bp | CTGGACACCAAGCAAGGAACATGGATGTCATCCCAATaGAAAATATACATGTCTTCAAGAGGGCCCACCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LDTKQGTWMSSQ*KIYMSSRGPTS Trigger: TGAGGTGGGCCCTCTTGAAGACATGTATATTTTGCATTGGGATGACATCCATGTTCCTTGCTTGGTGTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590930.5 |
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| CDS GCA 72 bp | GACCTCCTGAGCAGTGATGTAACATGGCTGCACTTCTaGAAAACTAATTATGGGCAGAGCTTCCAGGAAATG | + |
|
Preference number: 6 (lower is better) Translates to: DLLSSDVTWLHF*KTNYGQSFQEM Trigger: CATTTCCTGGAAGCTCTGCCCATAATTAGTTTTGCAGAAGTGCAGCCATGTTACATCACTGCTCAGGAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590930.5 |
||
| CDS TCA 72 bp | ACACTCAAAGAAGCTACCTGGGTAGCAGTTTATTTCTaGGCTTCATGGTATGTTGACAGGGCTGCCTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: TLKEATWVAVYF*ASWYVDRAASK Trigger: CTTTGAGGCAGCCCTGTCAACATACCATGAAGCTCAGAAATAAACTGCTACCCAGGTAGCTTCTTTGAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590930.5 |
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| CDS GCA 72 bp | GCTGGAGAGATTAAATCAGTGTCAGACACTTTCACATaGCCCAAGACTGTACACCATATTCCCAAAACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: AGEIKSVSDTFT*PKTVHHIPKTQ Trigger: CTGGGTTTTGGGAATATGGTGTACAGTCTTGGGGCATGTGAAAGTGTCTGACACTGATTTAATCTCTCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590930.5 |
||
| CDS CCA 72 bp | CAAATACCATGGTCCCAAAGCTCCAATAATCAACAGTaGCTGTGTAAGGCTTATTCTCAAAGAGCTCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QIPWSQSSNNQQ*LCKAYSQRALG Trigger: CCCCAGAGCTCTTTGAGAATAAGCCTTACACAGCCACTGTTGATTATTGGAGCTTTGGGACCATGGTATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370397.8 |
||
| CDS TCA 72 bp | TGTAGCTCCATGATTTCAGCATGCAAAGACATAATCTaGTCCTCCAGGTATCCAATGACACCAACCTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: CSSMISACKDII*SSRYPMTPTSA Trigger: TGCTGAGGTTGGTGTCATTGGATACCTGGAGGATCAGATTATGTCTTTGCATGCTGAAATCATGGAGCTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370397.8 |
||
| CDS TCA 72 bp | GCCAAGGCAGTTCAAATTTTCTTCTATCATTTGTGCTaGAGTCTCCCTGATATCAGCTTGCCTTCCTGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: AKAVQIFFYHLC*SLPDISLPSCH Trigger: ATGGCAGGAAGGCAAGCTGATATCAGGGAGACTTCAGCACAAATGATAGAAGAAAATTTGAACTGCCTTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590930.5 |
||
| CDS GCA 72 bp | GACTTAACATTGCTGCCCTTTGTCCCTGAAAGAGCCTaGTATAGTCTTCTTTTAGTCCAGACACATAGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: DLTLLPFVPERA*YSLLLVQTHSA Trigger: TGCACTATGTGTCTGGACTAAAAGAAGACTATAGCAGGCTCTTTCAGGGACAAAGGGCAGCAATGTTAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370397.8 |
||
| CDS CAA 72 bp | CATTATCTAGGCAGGTACATCTATCCCCAAGTTAGGTaGGAATACCACAGTAGTCAAGGGCTAAGAGGAGTA | + |
|
Preference number: 6 (lower is better) Translates to: HYLGRYIYPQVR*EYHSSQGLRGV Trigger: TACTCCTCTTAGCCCTTGACTACTGTGGTATTCCAACCTAACTTGGGGATAGATGTACCTGCCTAGATAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590930.5 |
||
| CDS CAA 90 bp | ACCTTAGGGAGTAGATCAATAATCTTCTGCTTACAGCCCAACAACTaGCTGGAGAGATTAAATCAGTGTCAGACACTTTCACATGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: TLGSRSIIFCLQPNN*LERLNQCQTLSHAP Trigger: TGGGGCATGTGAAAGTGTCTGACACTGATTTAATCTCTCCAGCAAGTTGTTGGGCTGTAAGCAGAAGATTATTGATCTACTCCCTAAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590930.5 |
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| CDS GCA 72 bp | GCCACTTCCACCTTAGGGAGTAGATCAATAATCTTCTaGTTACAGCCCAACAACTTGCTGGAGAGATTAAAT | + |
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Preference number: 6 (lower is better) Translates to: ATSTLGSRSIIF*LQPNNLLERLN Trigger: ATTTAATCTCTCCAGCAAGTTGTTGGGCTGTAAGCAGAAGATTATTGATCTACTCCCTAAGGTGGAAGTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590930.5 |
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| CDS CCA 72 bp | GAGATGATAATAAGTCCTGCATCTCAATTGCTAGTCTaGACACCAAGCAAGGAACATGGATGTCATCCCAAT | + |
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Preference number: 6 (lower is better) Translates to: EMIISPASQLLV*TPSKEHGCHPN Trigger: ATTGGGATGACATCCATGTTCCTTGCTTGGTGTCCAGACTAGCAATTGAGATGCAGGACTTATTATCATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590930.5 |
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| CDS CCA 72 bp | TCCCATATGCATCCCAAATGCCAGATAAGGCTAGCATaGAAAGTTAAACCTTTTGCACCCAACATAGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: SHMHPKCQIRLA*KVKPFAPNIAK Trigger: TTTGGCTATGTTGGGTGCAAAAGGTTTAACTTTCCATGCTAGCCTTATCTGGCATTTGGGATGCATATGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585551.1 |
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| CDS CAA 72 bp | TCTTTCTGCCTTTTTCCCTGCATGAACATGACAGTATaGTCAGCTTCTTTGATATTACTGAGGGCCACTTCC | + |
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Preference number: 6 (lower is better) Translates to: SFCLFPCMNMTV*SASLILLRATS Trigger: GGAAGTGGCCCTCAGTAATATCAAAGAAGCTGACAATACTGTCATGTTCATGCAGGGAAAAAGGCAGAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000370397.8 ENST00000590930.5 |
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| CDS CAA 72 bp | TGGAAAGGAGAGATGATAATAAGTCCTGCATCTCAATaGCTAGTCTGGACACCAAGCAAGGAACATGGATGT | + |
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Preference number: 6 (lower is better) Translates to: WKGEMIISPASQ*LVWTPSKEHGC Trigger: ACATCCATGTTCCTTGCTTGGTGTCCAGACTAGCAATTGAGATGCAGGACTTATTATCATCTCTCCTTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590930.5 |
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| CDS GCA 72 bp | TCTATCATTTGTGCTGAAGTCTCCCTGATATCAGCTTaGCTTCCTGCCATGTGCTTTTCTCTCATAAAAGTA | + |
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Preference number: 6 (lower is better) Translates to: SIICAEVSLISA*LPAMCFSLIKV Trigger: TACTTTTATGAGAGAAAAGCACATGGCAGGAAGGCAAGCTGATATCAGGGAGACTTCAGCACAAATGATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590930.5 |
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| CDS CCA 72 bp | AAGTATCTGGCTTTCTTTAAGTCCACAACAATTTTCTaGTTTGTTGAGCAGCTTTCGGAGATCTCCTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: KYLAFFKSTTIF*FVEQLSEISSR Trigger: TCTGGAGGAGATCTCCGAAAGCTGCTCAACAAACCAGAAAATTGTTGTGGACTTAAAGAAAGCCAGATACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS TCA 72 bp | ATGGGTTCTACTACTAAACTACAAAGGCTATTTGGTTaGGGTAAATGGCTACTAAACCGAACTTCTCCTGAC | + |
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Preference number: 6 (lower is better) Translates to: MGSTTKLQRLFG*GKWLLNRTSPD Trigger: GTCAGGAGAAGTTCGGTTTAGTAGCCATTTACCTCAACCAAATAGCCTTTGTAGTTTAGTAGTAGAACCCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS TCA 72 bp | TCATCAAACTTTCATTACCTAAAGGAAGGAGGCCCTTaGACTAGGTTGCTTGGAATTTCATGTTTATCCGTC | + |
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Preference number: 6 (lower is better) Translates to: SSNFHYLKEGGP*TRLLGISCLSV Trigger: GACGGATAAACATGAAATTCCAAGCAACCTAGTTCAAGGGCCTCCTTCCTTTAGGTAATGAAAGTTTGATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590930.5 |
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| CDS CCA 72 bp | ATCTCAATTGCTAGTCTGGACACCAAGCAAGGAACATaGATGTCATCCCAATGCAAAATATACATGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: ISIASLDTKQGT*MSSQCKIYMSS Trigger: TGAAGACATGTATATTTTGCATTGGGATGACATCCATGTTCCTTGCTTGGTGTCCAGACTAGCAATTGAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590930.5 |
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| CDS TCA 72 bp | ACTGTACACCATATTCCCAAAACCCAGCTGAGGAAATaGACCACAATCAGCATCAGATTTAATGACTTATCT | + |
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Preference number: 6 (lower is better) Translates to: TVHHIPKTQLRK*TTISIRFNDLS Trigger: AGATAAGTCATTAAATCTGATGCTGATTGTGGTTCATTTCCTCAGCTGGGTTTTGGGAATATGGTGTACAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590930.5 |
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| CDS CAA 72 bp | AGTAGATCAATAATCTTCTGCTTACAGCCCAACAACTaGCTGGAGAGATTAAATCAGTGTCAGACACTTTCA | + |
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Preference number: 6 (lower is better) Translates to: SRSIIFCLQPNN*LERLNQCQTLS Trigger: TGAAAGTGTCTGACACTGATTTAATCTCTCCAGCAAGTTGTTGGGCTGTAAGCAGAAGATTATTGATCTACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590930.5 |
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| CDS CAA 90 bp | CTTCAGAATTCTTCCTGGGTAAGTATACTTTACCAAAGAGGGCTTTaGTACTTTGAGAGGAACAAGATAAACGTATCCTGGTTTTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: LQNSSWVSILYQRGL*YFERNKINVSWFFS Trigger: ACTGAAAAACCAGGATACGTTTATCTTGTTCCTCTCAAAGTACAAAAGCCCTCTTTGGTAAAGTATACTTACCCAGGAAGAATTCTGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000590930.5 |
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| CDS TCA 72 bp | ATTCCAGTTTCACGCTCAATACGAGACTGTAGTGAATaGAGACTTTCATCAGGTGGTAACAGAAAAGAAATT | + |
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Preference number: 6 (lower is better) Translates to: IPVSRSIRDCSE*RLSSGGNRKEI Trigger: AATTTCTTTTCTGTTACCACCTGATGAAAGTCTTCATTCACTACAGTCTCGTATTGAGCGTGAAACTGGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS TCA 72 bp | GGTAAGTATACTTTACCAAAGAGGGCTTTTGTACTTTaGGAGGAACAAGATAAACGTATCCTGGTTTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: GKYTLPKRAFVL*EEQDKRILVFQ Trigger: CTGAAAAACCAGGATACGTTTATCTTGTTCCTCTCAAAGTACAAAAGCCCTCTTTGGTAAAGTATACTTACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000590930.5 |
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| CDS CAA 72 bp | TTCAATTCTTCAGGAACATCACAGGCCTTTACAACATaGGCATGGTTCAACTTCTTCATAATCTGGATTTCA | + |
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Preference number: 6 (lower is better) Translates to: FNSSGTSQAFTT*AWFNFFIIWIS Trigger: TGAAATCCAGATTATGAAGAAGTTGAACCATGCCAATGTTGTAAAGGCCTGTGATGTTCCTGAAGAATTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS CAA 90 bp | CACCTTTACACACCATTAGTAACCTGTCCTTGGACCCTTTCTTCATaGACTAAAACCAAATATATCCACTCATCTTATACCATTTTAGTT | + |
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Preference number: 6 (lower is better) Translates to: HLYTPLVTCPWTLSS*TKTKYIHSSYTILV Trigger: AACTAAAATGGTATAAGATGAGTGGATATATTTGGTTTTAGTCAATGAAGAAAGGGTCCAAGGACAGGTTACTAATGGTGTGTAAAGGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590930.5 |
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| CDS CCA 72 bp | ATCCCAGACCCTATATCACTTAGTAAAGAAAGTATCTaGCTTTCTTTAAGTCCACAACAATTTTCTGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: IPDPISLSKESI*LSLSPQQFSGL Trigger: CAAACCAGAAAATTGTTGTGGACTTAAAGAAAGCCAGATACTTTCTTTACTAAGTGATATAGGGTCTGGGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370397.8 |
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| CDS GCA 72 bp | TATATAAATTTATCAGTAAGAGACCTTAGTTGCCTGTaGTTGAGAACAATAGTCTTGGCTATCTTTAACCCA | + |
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Preference number: 6 (lower is better) Translates to: YINLSVRDLSCL*LRTIVLAIFNP Trigger: TGGGTTAAAGATAGCCAAGACTATTGTTCTCAAGCACAGGCAACTAAGGTCTCTTACTGATAAATTTATATA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590930.5 |
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