Pregenerated sensors for CHTF8 (Homo sapiens)
Ensembl gene IDs: ENSG00000168802Ensembl transcript IDs: ENST00000398235.6, ENST00000448552.7, ENST00000518041.5, ENST00000522091.1, ENST00000522497.1, ENST00000523421.5
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGCTATGCTGGCACCTCCAATCCCTGGTCTGGCTCTGCCATTGTTaGGCAGCCACACTGGACCACCCACCCATGTGCCCTTTTTACTTT | + |
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Preference number: 1 (lower is better) Translates to: RLCWHLQSLVWLCHC*AATLDHPPMCPFYF Trigger: AAAGTAAAAAGGGCACATGGGTGGGTGGTCCAGTGTGGCTGCTCAACAATGGCAGAGCCAGACCAGGGATTGGAGGTGCCAGCATAGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| 3UTR CAA 90 bp | TTCCGGGGCAAGGCCATAACACTCAGGCGCCTCCTAAAGCTGCTCTaGGCAGGCTATGCTGGCACCTCCAATCCCTGGTCTGGCTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: FRGKAITLRRLLKLL*AGYAGTSNPWSGSA Trigger: GGCAGAGCCAGACCAGGGATTGGAGGTGCCAGCATAGCCTGCCAAGAGCAGCTTTAGGAGGCGCCTGAGTGTTATGGCCTTGCCCCGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| 3UTR-3UTR TCA 90 bp | CCTGAGGTTCCGGGGCAAGGCCATAACACTCAGGCGCCTCCTAAAGCTGCTCTTTGGCTCTGCCATTGTTaGGCAGCCACACTGGACCAC | + |
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Preference number: 2 (lower is better) Translates to: PEVPGQGHNTQAPPKAALWLCHC*AATLDH Trigger: GTGGTCCAGTGTGGCTGCTCAACAATGGCAGAGCCA...AAGAGCAGCTTTAGGAGGCGCCTGAGTGTTATGGCCTTGCCCCGGAACCTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| 3UTR CAA 90 bp | TGGCAGGCTATGCTGGCACCTCCAATCCCTGGTCTGGCTCTGCCATaGTTGAGCAGCCACACTGGACCACCCACCCATGTGCCCTTTTTA | + |
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Preference number: 2 (lower is better) Translates to: WQAMLAPPIPGLALP*LSSHTGPPTHVPFL Trigger: TAAAAAGGGCACATGGGTGGGTGGTCCAGTGTGGCTGCTCAACAATGGCAGAGCCAGACCAGGGATTGGAGGTGCCAGCATAGCCTGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| 3UTR CAA 90 bp | CAGGCTATGCTGGCACCTCCAATCCCTGGTCTGGCTCTGCCATTGTaGAGCAGCCACACTGGACCACCCACCCATGTGCCCTTTTTACTT | + |
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Preference number: 2 (lower is better) Translates to: QAMLAPPIPGLALPL*SSHTGPPTHVPFLL Trigger: AAGTAAAAAGGGCACATGGGTGGGTGGTCCAGTGTGGCTGCTCAACAATGGCAGAGCCAGACCAGGGATTGGAGGTGCCAGCATAGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| 3UTR-3UTR TCA 90 bp | CAAGGCCATAACACTCAGGCGCCTCCTAAAGCTGCTCTTGGCAGGCTATGCTGGCCACTTTCAGAAATGTaGGCTTTCCAGATTCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: QGHNTQAPPKAALGRLCWPLSEM*AFQIPQ Trigger: TTGGGGAATCTGGAAAGCTCACATTTCTGAAAGTGG...CCAGCATAGCCTGCCAAGAGCAGCTTTAGGAGGCGCCTGAGTGTTATGGCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| 3UTR-3UTR GCA 90 bp | CTTTGGCAGAACAAGAACGAGATTCCTGAGGTTCCGGGGCAAGGCCATAACACTGACCACCCACCCATGTaGCCTTTTTACTTTCTAGCC | + |
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Preference number: 2 (lower is better) Translates to: LWQNKNEIPEVPGQGHNTDHPPM*PFYFLA Trigger: GGCTAGAAAGTAAAAAGGGCACATGGGTGGGTGGTC...AGTGTTATGGCCTTGCCCCGGAACCTCAGGAATCTCGTTCTTGTTCTGCCAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| 3UTR TCA 72 bp | TGGCACCTCCAATCCCTGGTCTGGCTCTGCCATTGTTaGGCAGCCACACTGGACCACCCACCCATGTGCCCT | + |
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Preference number: 3 (lower is better) Translates to: WHLQSLVWLCHC*AATLDHPPMCP Trigger: AGGGCACATGGGTGGGTGGTCCAGTGTGGCTGCTCAACAATGGCAGAGCCAGACCAGGGATTGGAGGTGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| 3UTR GCA 72 bp | ACTCAGGCGCCTCCTAAAGCTGCTCTTGGCAGGCTATaGTGGCACCTCCAATCCCTGGTCTGGCTCTGCCAT | + |
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Preference number: 3 (lower is better) Translates to: TQAPPKAALGRL*WHLQSLVWLCH Trigger: ATGGCAGAGCCAGACCAGGGATTGGAGGTGCCAGCATAGCCTGCCAAGAGCAGCTTTAGGAGGCGCCTGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| 3UTR CCA 72 bp | CAGGCGCCTCCTAAAGCTGCTCTTGGCAGGCTATGCTaGCACCTCCAATCCCTGGTCTGGCTCTGCCATTGT | + |
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Preference number: 3 (lower is better) Translates to: QAPPKAALGRLC*HLQSLVWLCHC Trigger: ACAATGGCAGAGCCAGACCAGGGATTGGAGGTGCCAGCATAGCCTGCCAAGAGCAGCTTTAGGAGGCGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| 3UTR-3UTR CAA 90 bp | TTTGGCAGAACAAGAACGAGATTCCTGAGGTTCCGGGGCAAGGCCATAACACTCGGTCTGGCTCTGCCATaGTTGAGCAGCCACACTGGA | + |
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Preference number: 3 (lower is better) Translates to: FGRTRTRFLRFRGKAITLGLALP*LSSHTG Trigger: TCCAGTGTGGCTGCTCAACAATGGCAGAGCCAGACC...GAGTGTTATGGCCTTGCCCCGGAACCTCAGGAATCTCGTTCTTGTTCTGCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| 3UTR CAA 72 bp | CTGGCACCTCCAATCCCTGGTCTGGCTCTGCCATTGTaGAGCAGCCACACTGGACCACCCACCCATGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: LAPPIPGLALPL*SSHTGPPTHVP Trigger: GGGCACATGGGTGGGTGGTCCAGTGTGGCTGCTCAACAATGGCAGAGCCAGACCAGGGATTGGAGGTGCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| CDS-3UTR GCA 90 bp | CTGGCTCTGCCATTGTTGAGCAGCCACACTGGACCACCCACCCATGTGCCCTTTCATCAGCACCCATTCTaGCAGGCCTCCAGCCCTCGC | + |
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Preference number: 4 (lower is better) Translates to: LALPLLSSHTGPPTHVPFHQHPF*QASSPR Trigger: GCGAGGGCTGGAGGCCTGGCAGAATGGGTGCTGATG...AAAGGGCACATGGGTGGGTGGTCCAGTGTGGCTGCTCAACAATGGCAGAGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| CDS-3UTR CCA 90 bp | CCCTGGTCTGGCTCTGCCATTGTTGAGCAGCCACACTGGACCACCCACCCATGTAGGCAGTCCTCACTCTaGGTCCTGGGAGCACCACCT | + |
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Preference number: 4 (lower is better) Translates to: PWSGSAIVEQPHWTTHPCRQSSL*VLGAPP Trigger: AGGTGGTGCTCCCAGGACCCAGAGTGAGGACTGCCT...ACATGGGTGGGTGGTCCAGTGTGGCTGCTCAACAATGGCAGAGCCAGACCAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| CDS-3UTR GCA 90 bp | GGCACCTCCAATCCCTGGTCTGGCTCTGCCATTGTTGAGCAGCCACACTGGACCGCTCTTGGCAGGCTATaGTGGCACCTCCAATCCCTG | + |
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Preference number: 4 (lower is better) Translates to: GTSNPWSGSAIVEQPHWTALGRL*WHLQSL Trigger: CAGGGATTGGAGGTGCCAGCATAGCCTGCCAAGAGC...GGTCCAGTGTGGCTGCTCAACAATGGCAGAGCCAGACCAGGGATTGGAGGTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| 3UTR CAA 72 bp | ATGCTGGCACCTCCAATCCCTGGTCTGGCTCTGCCATaGTTGAGCAGCCACACTGGACCACCCACCCATGTG | + |
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Preference number: 4 (lower is better) Translates to: MLAPPIPGLALP*LSSHTGPPTHV Trigger: CACATGGGTGGGTGGTCCAGTGTGGCTGCTCAACAATGGCAGAGCCAGACCAGGGATTGGAGGTGCCAGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| CDS-3UTR TCA 90 bp | TATGCTGGCACCTCCAATCCCTGGTCTGGCTCTGCCATTGTTGAGCAGCCACACTGGCTCTGCCATTGTTaGGCAGCCACACTGGACCAC | + |
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Preference number: 4 (lower is better) Translates to: YAGTSNPWSGSAIVEQPHWLCHC*AATLDH Trigger: GTGGTCCAGTGTGGCTGCTCAACAATGGCAGAGCCA...GTGTGGCTGCTCAACAATGGCAGAGCCAGACCAGGGATTGGAGGTGCCAGCATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| CDS-3UTR CCA 90 bp | ATTCCTGAGGTTCCGGGGCAAGGCCATAACACTCAGGCGCCTCCTAAAGCTGCTCTTGGCAGGCTATGCTaGCACCTCCAATCCCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: IPEVPGQGHNTQAPPKAALGRLC*HLQSLV Trigger: GACCAGGGATTGGAGGTGCCAGCATAGCCTGCCAAG...AGCAGCTTTAGGAGGCGCCTGAGTGTTATGGCCTTGCCCCGGAACCTCAGGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| 3UTR CAA 72 bp | AAGGCCATAACACTCAGGCGCCTCCTAAAGCTGCTCTaGGCAGGCTATGCTGGCACCTCCAATCCCTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: KAITLRRLLKLL*AGYAGTSNPWS Trigger: AGACCAGGGATTGGAGGTGCCAGCATAGCCTGCCAAGAGCAGCTTTAGGAGGCGCCTGAGTGTTATGGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| CDS-3UTR TCA 90 bp | ACAGGGATTCCCTTTGGCAGAACAAGAACGAGATTCCTGAGGTTCCGGGGCAAGCAAGAACGAGATTCCTaGGGTTCCGGGGCAAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: TGIPFGRTRTRFLRFRGKQERDS*GSGARP Trigger: TGGCCTTGCCCCGGAACCTCAGGAATCTCGTTCTTG...CTTGCCCCGGAACCTCAGGAATCTCGTTCTTGTTCTGCCAAAGGGAATCCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| CDS-3UTR CCA 90 bp | TGGCAGAACAAGAACGAGATTCCTGAGGTTCCGGGGCAAGGCCATAACACTCAGCCTCACTCTGGGTCCTaGGAGCACCACCTTGGTGTA | + |
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Preference number: 4 (lower is better) Translates to: WQNKNEIPEVPGQGHNTQPHSGS*EHHLGV Trigger: TACACCAAGGTGGTGCTCCCAGGACCCAGAGTGAGG...CTGAGTGTTATGGCCTTGCCCCGGAACCTCAGGAATCTCGTTCTTGTTCTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| CDS-3UTR GCA 90 bp | CCATTGTTGAGCAGCCACACTGGACCACCCACCCATGTGCCCTTTTTACTTTCTCAAGTGAAAACAAGCTaGAATGGCGGCCGCCGAGCG | + |
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Preference number: 4 (lower is better) Translates to: PLLSSHTGPPTHVPFLLSQVKTS*NGGRRA Trigger: CGCTCGGCGGCCGCCATTGCAGCTTGTTTTCACTTG...AGAAAGTAAAAAGGGCACATGGGTGGGTGGTCCAGTGTGGCTGCTCAACAATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| CDS-3UTR GCA 90 bp | ATTCCTGAGGTTCCGGGGCAAGGCCATAACACTCAGGCGCCTCCTAAAGCTGCTGACCACCCACCCATGTaGCCTTTTTACTTTCTAGCC | + |
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Preference number: 4 (lower is better) Translates to: IPEVPGQGHNTQAPPKAADHPPM*PFYFLA Trigger: GGCTAGAAAGTAAAAAGGGCACATGGGTGGGTGGTC...AGCAGCTTTAGGAGGCGCCTGAGTGTTATGGCCTTGCCCCGGAACCTCAGGAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| CDS-3UTR CCA 90 bp | CCCTGGTCTGGCTCTGCCATTGTTGAGCAGCCACACTGGACCACCCACCCATGTCACAGGGATTCCCTTTaGCAGAACAAGAACGAGATT | + |
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Preference number: 4 (lower is better) Translates to: PWSGSAIVEQPHWTTHPCHRDSL*QNKNEI Trigger: AATCTCGTTCTTGTTCTGCCAAAGGGAATCCCTGTG...ACATGGGTGGGTGGTCCAGTGTGGCTGCTCAACAATGGCAGAGCCAGACCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| CDS-3UTR GCA 90 bp | GCCACACTGGACCACCCACCCATGTGCCCTTTTTACTTTCTAGCCCCACATAGGCACCTTGGTGTAGCTTaGTTTCCTGAGGCATTAGGC | + |
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Preference number: 4 (lower is better) Translates to: ATLDHPPMCPFYFLAPHRHLGVA*FPEALG Trigger: GCCTAATGCCTCAGGAAAGCAAGCTACACCAAGGTG...CCTATGTGGGGCTAGAAAGTAAAAAGGGCACATGGGTGGGTGGTCCAGTGTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| CDS-3UTR GCA 90 bp | ATTCCTGAGGTTCCGGGGCAAGGCCATAACACTCAGGCGCCTCCTAAAGCTGCTAAATTTCCCTGCTACTaGAGAGGTAGGGGGAGAACA | + |
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Preference number: 4 (lower is better) Translates to: IPEVPGQGHNTQAPPKAAKFPCY*RGRGRT Trigger: TGTTCTCCCCCTACCTCTGCAGTAGCAGGGAAATTT...AGCAGCTTTAGGAGGCGCCTGAGTGTTATGGCCTTGCCCCGGAACCTCAGGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| CDS-3UTR GCA 90 bp | GCTGCTCTTGGCAGGCTATGCTGGCACCTCCAATCCCTGGTCTGGCTCTGCCATAAAATTAAATTTCCCTaGTACTGCAGAGGTAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: AALGRLCWHLQSLVWLCHKIKFP*YCRGRG Trigger: CCCCCTACCTCTGCAGTAGCAGGGAAATTTAATTTT...ATGGCAGAGCCAGACCAGGGATTGGAGGTGCCAGCATAGCCTGCCAAGAGCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| CDS-3UTR TCA 90 bp | TGGCAGAACAAGAACGAGATTCCTGAGGTTCCGGGGCAAGGCCATAACACTCAGTTCCCATACAGGATATaGTGCCCCACGATCAGCACA | + |
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Preference number: 4 (lower is better) Translates to: WQNKNEIPEVPGQGHNTQFPYRI*CPTIST Trigger: TGTGCTGATCGTGGGGCATCATATCCTGTATGGGAA...CTGAGTGTTATGGCCTTGCCCCGGAACCTCAGGAATCTCGTTCTTGTTCTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| CDS-3UTR TCA 90 bp | ACGAGATTCCTGAGGTTCCGGGGCAAGGCCATAACACTCAGGCGCCTCCTAAAGCCACTTTCAGAAATGTaGGCTTTCCAGATTCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: TRFLRFRGKAITLRRLLKPLSEM*AFQIPQ Trigger: TTGGGGAATCTGGAAAGCTCACATTTCTGAAAGTGG...CTTTAGGAGGCGCCTGAGTGTTATGGCCTTGCCCCGGAACCTCAGGAATCTCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| CDS-3UTR CCA 90 bp | GACCACCCACCCATGTGCCCTTTTTACTTTCTAGCCCCACATAGGAGAATTTCCGCCCCCTCACCTCAGTaGTGTAATGTAGGTCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: DHPPMCPFYFLAPHRRISAPSPQ*CNVGLP Trigger: TGGGAGACCTACATTACACCACTGAGGTGAGGGGGC...GGAAATTCTCCTATGTGGGGCTAGAAAGTAAAAAGGGCACATGGGTGGGTGGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| CDS-3UTR TCA 90 bp | GCCACACTGGACCACCCACCCATGTGCCCTTTTTACTTTCTAGCCCCACATAGGAGATTAGCTAGGCCTTaGATAACAAACCTGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: ATLDHPPMCPFYFLAPHRRLARP*ITNLRQ Trigger: CTGCCTCAGGTTTGTTATTCAAGGCCTAGCTAATCT...CCTATGTGGGGCTAGAAAGTAAAAAGGGCACATGGGTGGGTGGTCCAGTGTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| CDS-3UTR GCA 90 bp | GACCACCCACCCATGTGCCCTTTTTACTTTCTAGCCCCACATAGGAGAATTTCCTTCCAGCTAATCCAGTaGTGTAGCGAGCCTCGATCT | + |
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Preference number: 4 (lower is better) Translates to: DHPPMCPFYFLAPHRRISFQLIQ*CSEPRS Trigger: AGATCGAGGCTCGCTACAGCACTGGATTAGCTGGAA...GGAAATTCTCCTATGTGGGGCTAGAAAGTAAAAAGGGCACATGGGTGGGTGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| CDS-3UTR TCA 90 bp | CCATTGTTGAGCAGCCACACTGGACCACCCACCCATGTGCCCTTTTTACTTTCTGTTTCTCCAGGTGGATaGTTTTCCCATACAGGATAT | + |
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Preference number: 4 (lower is better) Translates to: PLLSSHTGPPTHVPFLLSVSPGG*FSHTGY Trigger: ATATCCTGTATGGGAAAATCATCCACCTGGAGAAAC...AGAAAGTAAAAAGGGCACATGGGTGGGTGGTCCAGTGTGGCTGCTCAACAATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| CDS-3UTR CAA 90 bp | GCTGGCACCTCCAATCCCTGGTCTGGCTCTGCCATTGTTGAGCAGCCACACTGGCTGGCTCTGCCATTGTaGAGCAGCCACACTGGACCA | + |
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Preference number: 5 (lower is better) Translates to: AGTSNPWSGSAIVEQPHWLALPL*SSHTGP Trigger: TGGTCCAGTGTGGCTGCTCAACAATGGCAGAGCCAG...CCAGTGTGGCTGCTCAACAATGGCAGAGCCAGACCAGGGATTGGAGGTGCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| CDS GCA 90 bp | GGCAGTCCTCACTCTGGGTCCTGGGAGCACCACCTTGGTGTAGCTTaGTTTCCTGAGGCATTAGGCAGGGAAAGAAAAGCCCCCTCACCT | + |
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Preference number: 5 (lower is better) Translates to: GSPHSGSWEHHLGVA*FPEALGRERKAPSP Trigger: AGGTGAGGGGGCTTTTCTTTCCCTGCCTAATGCCTCAGGAAAGCAAGCTACACCAAGGTGGTGCTCCCAGGACCCAGAGTGAGGACTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| CDS-3UTR CAA 90 bp | ATTCCTGAGGTTCCGGGGCAAGGCCATAACACTCAGGCGCCTCCTAAAGCTGCTCTCCTAAAGCTGCTCTaGGCAGGCTATGCTGGCACC | + |
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Preference number: 5 (lower is better) Translates to: IPEVPGQGHNTQAPPKAALLKLL*AGYAGT Trigger: GGTGCCAGCATAGCCTGCCAAGAGCAGCTTTAGGAG...AGCAGCTTTAGGAGGCGCCTGAGTGTTATGGCCTTGCCCCGGAACCTCAGGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| CDS GCA 90 bp | CAGTGGTGTAATGTAGGTCTCCCAGGAGGTTTCCAGCTAATCCAGTaGTGTAGCGAGCCTCGATCTCCCCCTGTAGCTCCATCAGCACCC | + |
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Preference number: 5 (lower is better) Translates to: QWCNVGLPGGFQLIQ*CSEPRSPPVAPSAP Trigger: GGGTGCTGATGGAGCTACAGGGGGAGATCGAGGCTCGCTACAGCACTGGATTAGCTGGAAACCTCCTGGGAGACCTACATTACACCACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000398235.6 ENST00000448552.7 ENST00000518041.5 ENST00000522091.1 ENST00000522497.1 ENST00000523421.5 |
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| CDS TCA 90 bp | GGTAGGGGGAGAACAAGCAGAGAGCATCGCAGATTAGCTAGGCCTTaGATAACAAACCTGAGGCAGTCCTCACTCTGGGTCCTGGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: GRGRTSREHRRLARP*ITNLRQSSLWVLGA Trigger: TGCTCCCAGGACCCAGAGTGAGGACTGCCTCAGGTTTGTTATTCAAGGCCTAGCTAATCTGCGATGCTCTCTGCTTGTTCTCCCCCTACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| CDS-3UTR CAA 90 bp | CAGCACAGGGATTCCCTTTGGCAGAACAAGAACGAGATTCCTGAGGTTCCGGGGGCACAGGGATTCCCTTaGGCAGAACAAGAACGAGAT | + |
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Preference number: 5 (lower is better) Translates to: QHRDSLWQNKNEIPEVPGAQGFP*AEQERD Trigger: ATCTCGTTCTTGTTCTGCCAAAGGGAATCCCTGTGC...CCCCGGAACCTCAGGAATCTCGTTCTTGTTCTGCCAAAGGGAATCCCTGTGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| CDS-3UTR CAA 90 bp | CCACCCATGTGCCCTTTTTACTTTCTAGCCCCACATAGGAGAATTTCCACTTTCGGTCTGGCTCTGCCATaGTTGAGCAGCCACACTGGA | + |
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Preference number: 5 (lower is better) Translates to: PPMCPFYFLAPHRRISTFGLALP*LSSHTG Trigger: TCCAGTGTGGCTGCTCAACAATGGCAGAGCCAGACC...GAAAGTGGAAATTCTCCTATGTGGGGCTAGAAAGTAAAAAGGGCACATGGGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| CDS GCA 72 bp | AATGTAGGTCTCCCAGGAGGTTTCCAGCTAATCCAGTaGTGTAGCGAGCCTCGATCTCCCCCTGTAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: NVGLPGGFQLIQ*CSEPRSPPVAP Trigger: TGGAGCTACAGGGGGAGATCGAGGCTCGCTACAGCACTGGATTAGCTGGAAACCTCCTGGGAGACCTACATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000398235.6 ENST00000448552.7 ENST00000518041.5 ENST00000522091.1 ENST00000522497.1 ENST00000523421.5 |
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| CDS GCA 72 bp | CACTCTGGGTCCTGGGAGCACCACCTTGGTGTAGCTTaGTTTCCTGAGGCATTAGGCAGGGAAAGAAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: HSGSWEHHLGVA*FPEALGRERKA Trigger: GGCTTTTCTTTCCCTGCCTAATGCCTCAGGAAAGCAAGCTACACCAAGGTGGTGCTCCCAGGACCCAGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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| CDS TCA 72 bp | AGAACAAGCAGAGAGCATCGCAGATTAGCTAGGCCTTaGATAACAAACCTGAGGCAGTCCTCACTCTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: RTSREHRRLARP*ITNLRQSSLWV Trigger: GACCCAGAGTGAGGACTGCCTCAGGTTTGTTATTCAAGGCCTAGCTAATCTGCGATGCTCTCTGCTTGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522091.1 |
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