RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHSY1 (Homo sapiens)

Ensembl gene IDs: ENSG00000131873

Ensembl transcript IDs: ENST00000254190.4, ENST00000543813.2, ENST00000559384.1, ENST00000561143.1

Found 250 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATCATCTCCATGACCTGCATGACAATGTCGTCCAAGGCTTCCCTCTaGGCGGAGTCCATTCCTCTTCGAGGGGGCTGGCCGTCAACTGCC +
Preference number: 1 (lower is better)
Translates to: IISMTCMTMSSKASL*AESIPLRGGWPSTA
Trigger: GGCAGTTGACGGCCAGCCCCCTCGAAGAGGAATGGACTCCGCCCAGAGGGAAGCCTTGGACGACATTGTCATGCAGGTCATGGAGATGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR TCA 90 bp CCAGTCAGAAACTCCCATTCCAGAATCTCCTCTCGCTGGCGGGGCTaGAACCTCATGAAGGAGGGAGGGATTCCCAGCTGGAGGTCCTCT +
Preference number: 1 (lower is better)
Translates to: PVRNSHSRISSRWRG*NLMKEGGIPSWRSS
Trigger: AGAGGACCTCCAGCTGGGAATCCCTCCCTCCTTCATGAGGTTTCAGCCCCGCCAGCGAGAGGAGATTCTGGAATGGGAGTTTCTGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR GCA 90 bp TTTCGCGGTGCAGCTGTATTGTGCGATGGCGGAGCTCGGATATCTTaGGGCTCAGCATGTAGCTGTGGAGCCTGTACTGGTAGGGTGGGT +
Preference number: 1 (lower is better)
Translates to: FRGAAVLCDGGARIS*GSACSCGACTGRVG
Trigger: ACCCACCCTACCAGTACAGGCTCCACAGCTACATGCTGAGCCGCAAGATATCCGAGCTCCGCCATCGCACAATACAGCTGCACCGCGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR GCA 90 bp CCACGAGAACAGCCACATACCTCACTGTGCCTTCTTCACGCCCCTTaGTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGGTGAAACCC +
Preference number: 1 (lower is better)
Translates to: PREQPHTSLCLLHAP*FKTYVASWACMVKP
Trigger: GGGTTTCACCATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAGAAGGCACAGTGAGGTATGTGGCTGTTCTCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254190.4
3UTR CCA 90 bp TCCAAGGCTTCCCTCTGGGCGGAGTCCATTCCTCTTCGAGGGGGCTaGCCGTCAACTGCCGAATACAAGTATTTTCCAGTCAGAAACTCC +
Preference number: 1 (lower is better)
Translates to: SKASLWAESIPLRGG*PSTAEYKYFPVRNS
Trigger: GGAGTTTCTGACTGGAAAATACTTGTATTCGGCAGTTGACGGCCAGCCCCCTCGAAGAGGAATGGACTCCGCCCAGAGGGAAGCCTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR TCA 90 bp ACTCCCATTCCAGAATCTCCTCTCGCTGGCGGGGCTGAAACCTCATaGAGGAGGGAGGGATTCCCAGCTGGAGGTCCTCTTTATGAATTT +
Preference number: 1 (lower is better)
Translates to: TPIPESPLAGGAETS*RREGFPAGGPLYEF
Trigger: AAATTCATAAAGAGGACCTCCAGCTGGGAATCCCTCCCTCCTTCATGAGGTTTCAGCCCCGCCAGCGAGAGGAGATTCTGGAATGGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR GCA 90 bp GACGTGGACTACTCCTACTTCCTGGCTCCTAAACGTCTTCAAACCTaGCTGGACAACCTTGTTGAAAAGGTCCACATCCTCCAGCCCCCA +
Preference number: 1 (lower is better)
Translates to: DVDYSYFLAPKRLQT*LDNLVEKVHILQPP
Trigger: TGGGGGCTGGAGGATGTGGACCTTTTCAACAAGGTTGTCCAGGCAGGTTTGAAGACGTTTAGGAGCCAGGAAGTAGGAGTAGTCCACGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR GCA 90 bp TTTAGGCCGAATGAACTACCACGAGAACAGCCACATACCTCACTGTaGCTTCTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGG +
Preference number: 1 (lower is better)
Translates to: FRPNELPREQPHTSL*LLHAPCFKTYVASW
Trigger: CCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAGAAGGCACAGTGAGGTATGTGGCTGTTCTCGTGGTAGTTCATTCGGCCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254190.4
3UTR TCA 90 bp ACTCTTGTGCATCCAGCTCCTCATGCTCCACAAACTGGATTTTGCTaGAAGTCTGCTGTAAATACGCGTGCCTCCTCACAGGGACCGTCA +
Preference number: 1 (lower is better)
Translates to: TLVHPAPHAPQTGFC*KSAVNTRASSQGPS
Trigger: TGACGGTCCCTGTGAGGAGGCACGCGTATTTACAGCAGACTTTCAGCAAAATCCAGTTTGTGGAGCATGAGGAGCTGGATGCACAAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR GCA 90 bp GCATCCAGCTCCTCATGCTCCACAAACTGGATTTTGCTGAAAGTCTaGTGTAAATACGCGTGCCTCCTCACAGGGACCGTCATTTTCTTC +
Preference number: 1 (lower is better)
Translates to: ASSSSCSTNWILLKV*CKYACLLTGTVIFF
Trigger: GAAGAAAATGACGGTCCCTGTGAGGAGGCACGCGTATTTACAGCAGACTTTCAGCAAAATCCAGTTTGTGGAGCATGAGGAGCTGGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR CCA 90 bp CTCTTGGCCAACTCTTGTGCATCCAGCTCCTCATGCTCCACAAACTaGATTTTGCTGAAAGTCTGCTGTAAATACGCGTGCCTCCTCACA +
Preference number: 1 (lower is better)
Translates to: LLANSCASSSSCSTN*ILLKVCCKYACLLT
Trigger: TGTGAGGAGGCACGCGTATTTACAGCAGACTTTCAGCAAAATCCAGTTTGTGGAGCATGAGGAGCTGGATGCACAAGAGTTGGCCAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR CCA 90 bp GGATCACAAAAGACAGGATGGTGGACGTGGACTACTCCTACTTCCTaGCTCCTAAACGTCTTCAAACCTGCCTGGACAACCTTGTTGAAA +
Preference number: 1 (lower is better)
Translates to: GSQKTGWWTWTTPTS*LLNVFKPAWTTLLK
Trigger: TTTCAACAAGGTTGTCCAGGCAGGTTTGAAGACGTTTAGGAGCCAGGAAGTAGGAGTAGTCCACGTCCACCATCCTGTCTTTTGTGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR TCA 90 bp AGCTTCTTCAGGGAGTTTGAGAGAAAGGACAAGGATCCAGATTCCTaGTTGATTCTCTTGGCCAACTCTTGTGCATCCAGCTCCTCATGC +
Preference number: 1 (lower is better)
Translates to: SFFREFERKDKDPDS*LILLANSCASSSSC
Trigger: GCATGAGGAGCTGGATGCACAAGAGTTGGCCAAGAGAATCAATCAGGAATCTGGATCCTTGTCCTTTCTCTCAAACTCCCTGAAGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR TCA 90 bp TTTTTATCTTTGGGTTCTTTGTGCTCACTCTTCGACCCAGGGAGCTaGAAGGGGACGAGCTTCTTCAGGGAGTTTGAGAGAAAGGACAAG +
Preference number: 1 (lower is better)
Translates to: FLSLGSLCSLFDPGS*KGTSFFREFERKDK
Trigger: CTTGTCCTTTCTCTCAAACTCCCTGAAGAAGCTCGTCCCCTTTCAGCTCCCTGGGTCGAAGAGTGAGCACAAAGAACCCAAAGATAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR GCA 90 bp TTCCCAGCTGGAGGTCCTCTTTATGAATTTCTGTGTTGCTGTATTTaGTCATCAGGACAATTTCGCGGTGCAGCTGTATTGTGCGATGGC +
Preference number: 1 (lower is better)
Translates to: FPAGGPLYEFLCCCI*SSGQFRGAAVLCDG
Trigger: GCCATCGCACAATACAGCTGCACCGCGAAATTGTCCTGATGAGCAAATACAGCAACACAGAAATTCATAAAGAGGACCTCCAGCTGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR CCA 90 bp CGAAACGCCCAGACAAAGGAATCAGTATGTTTATCTTTTTATCTTTaGGTTCTTTGTGCTCACTCTTCGACCCAGGGAGCTGAAAGGGGA +
Preference number: 1 (lower is better)
Translates to: RNAQTKESVCLSFYL*VLCAHSSTQGAERG
Trigger: TCCCCTTTCAGCTCCCTGGGTCGAAGAGTGAGCACAAAGAACCCAAAGATAAAAAGATAAACATACTGATTCCTTTGTCTGGGCGTTTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR TCA 90 bp CTGCTACATAATGTTCAGCAAGAAGATGTGTTCAAAGGCAAACACTaGTCACCTTCTTGTTCAGAAAGCTCAATCTTAAAGGAGTCCTAT +
Preference number: 1 (lower is better)
Translates to: LLHNVQQEDVFKGKH*SPSCSESSILKESY
Trigger: ATAGGACTCCTTTAAGATTGAGCTTTCTGAACAAGAAGGTGATCAGTGTTTGCCTTTGAACACATCTTCTTGCTGAACATTATGTAGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
3UTR GCA 90 bp ACAGAACATTTACCAGAGTTACAGTGTTTTGTTACAATAATACTTTaGAGGAATGTTCACGTTTTCTGCCATAGGACTGGAGCAAAGGGT +
Preference number: 1 (lower is better)
Translates to: TEHLPELQCFVTIIL*RNVHVFCHRTGAKG
Trigger: ACCCTTTGCTCCAGTCCTATGGCAGAAAACGTGAACATTCCTGCAAAGTATTATTGTAACAAAACACTGTAACTCTGGTAAATGTTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254190.4
3UTR GCA 90 bp AAGTTTTGTTCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTaGTACATAATGTTCAGCAAGAAGATGTGTTCAAAGGCAAACACT +
Preference number: 1 (lower is better)
Translates to: KFCSSGTFQVKVKQV*YIMFSKKMCSKANT
Trigger: AGTGTTTGCCTTTGAACACATCTTCTTGCTGAACATTATGTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGAACAAAACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
3UTR-3UTR CCA 90 bp AGGCTTCCCTCTGGGCGGAGTCCATTCCTCTTCGAGGGGGCTGGCCGTCAACTGAGCTGTATTGTGCGATaGCGGAGCTCGGATATCTTG +
Preference number: 2 (lower is better)
Translates to: RLPSGRSPFLFEGAGRQLSCIVR*RSSDIL
Trigger: CAAGATATCCGAGCTCCGCCATCGCACAATACAGCT...CAGTTGACGGCCAGCCCCCTCGAAGAGGAATGGACTCCGCCCAGAGGGAAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR-3UTR GCA 90 bp CTCTGGGCGGAGTCCATTCCTCTTCGAGGGGGCTGGCCGTCAACTGCCGAATACAGGACAATTTCGCGGTaGAGCTGTATTGTGCGATGG +
Preference number: 2 (lower is better)
Translates to: LWAESIPLRGGWPSTAEYRTISR*SCIVRW
Trigger: CCATCGCACAATACAGCTGCACCGCGAAATTGTCCT...GTATTCGGCAGTTGACGGCCAGCCCCCTCGAAGAGGAATGGACTCCGCCCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR-3UTR GCA 90 bp CTACCACGAGAACAGCCACATACCTCACTGTGCCTTCTTCACGCCCCTTGCTTTGTGGCCAGCTGGGCTTaGATGGTGAAACCCCGTCTC +
Preference number: 2 (lower is better)
Translates to: LPREQPHTSLCLLHAPCFVASWA*MVKPRL
Trigger: GAGACGGGGTTTCACCATGCAAGCCCAGCTGGCCAC...AAAGCAAGGGGCGTGAAGAAGGCACAGTGAGGTATGTGGCTGTTCTCGTGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254190.4
3UTR-3UTR CCA 90 bp TTCAAACCTGCCTGGACAACCTTGTTGAAAAGGTCCACATCCTCCAGCCCCCAGACTCAGCCCCATACATaGGGTTCACCCGGCGGTAGC +
Preference number: 2 (lower is better)
Translates to: FKPAWTTLLKRSTSSSPQTQPHT*GSPGGS
Trigger: GCTACCGCCGGGTGAACCCCATGTATGGGGCTGAGT...CTGGGGGCTGGAGGATGTGGACCTTTTCAACAAGGTTGTCCAGGCAGGTTTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR-3UTR TCA 90 bp CTACCACGAGAACAGCCACATACCTCACTGTGCCTTCTTCACGCCCCTTGCTTTCCTACGTGGCCATGCTaGGCAGAGTACCATGAGAGG +
Preference number: 2 (lower is better)
Translates to: LPREQPHTSLCLLHAPCFPTWPC*AEYHER
Trigger: CCTCTCATGGTACTCTGCTCAGCATGGCCACGTAGG...AAAGCAAGGGGCGTGAAGAAGGCACAGTGAGGTATGTGGCTGTTCTCGTGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254190.4
3UTR-3UTR GCA 90 bp ATCATCTCCATGACCTGCATGACAATGTCGTCCAAGGCTTCCCTCTGGGCGGAGGGAGCTCGGATATCTTaGGGCTCAGCATGTAGCTGT +
Preference number: 2 (lower is better)
Translates to: IISMTCMTMSSKASLWAEGARIS*GSACSC
Trigger: ACAGCTACATGCTGAGCCGCAAGATATCCGAGCTCC...CTCCGCCCAGAGGGAAGCCTTGGACGACATTGTCATGCAGGTCATGGAGATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR CAA 90 bp CTGGACAACCTTGTTGAAAAGGTCCACATCCTCCAGCCCCCAGCCTaGGATGGAAACATCAAAGCCACCCACTCGGACAAGATCTCCCTT +
Preference number: 2 (lower is better)
Translates to: LDNLVEKVHILQPPA*DGNIKATHSDKISL
Trigger: AAGGGAGATCTTGTCCGAGTGGGTGGCTTTGATGTTTCCATCCAAGGCTGGGGGCTGGAGGATGTGGACCTTTTCAACAAGGTTGTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR-3UTR TCA 90 bp TCAAGATTGGGATCACAAAAGACAGGATGGTGGACGTGGACTACTCCTACTTCCTCTCGCTGGCGGGGCTaGAACCTCATGAAGGAGGGA +
Preference number: 2 (lower is better)
Translates to: SRLGSQKTGWWTWTTPTSSRWRG*NLMKEG
Trigger: TCCCTCCTTCATGAGGTTTCAGCCCCGCCAGCGAGA...GGAAGTAGGAGTAGTCCACGTCCACCATCCTGTCTTTTGTGATCCCAATCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR-3UTR GCA 90 bp GTGGACGTGGACTACTCCTACTTCCTGGCTCCTAAACGTCTTCAAACCTGCCTGCTTGGCCAACTCTTGTaGATCCAGCTCCTCATGCTC +
Preference number: 2 (lower is better)
Translates to: VDVDYSYFLAPKRLQTCLLGQLL*IQLLML
Trigger: GAGCATGAGGAGCTGGATGCACAAGAGTTGGCCAAG...CAGGCAGGTTTGAAGACGTTTAGGAGCCAGGAAGTAGGAGTAGTCCACGTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR-3UTR CCA 90 bp GACAGGATGGTGGACGTGGACTACTCCTACTTCCTGGCTCCTAAACGTCTTCAATCCAAGGCTTCCCTCTaGGCGGAGTCCATTCCTCTT +
Preference number: 2 (lower is better)
Translates to: DRMVDVDYSYFLAPKRLQSKASL*AESIPL
Trigger: AAGAGGAATGGACTCCGCCCAGAGGGAAGCCTTGGA...TTGAAGACGTTTAGGAGCCAGGAAGTAGGAGTAGTCCACGTCCACCATCCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR CAA 90 bp GCCAACTCTTGTGCATCCAGCTCCTCATGCTCCACAAACTGGATTTaGCTGAAAGTCTGCTGTAAATACGCGTGCCTCCTCACAGGGACC +
Preference number: 2 (lower is better)
Translates to: ANSCASSSSCSTNWI*LKVCCKYACLLTGT
Trigger: GGTCCCTGTGAGGAGGCACGCGTATTTACAGCAGACTTTCAGCAAAATCCAGTTTGTGGAGCATGAGGAGCTGGATGCACAAGAGTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR CAA 90 bp ACTTCCTGGCTCCTAAACGTCTTCAAACCTGCCTGGACAACCTTGTaGAAAAGGTCCACATCCTCCAGCCCCCAGCCTTGGATGGAAACA +
Preference number: 2 (lower is better)
Translates to: TSWLLNVFKPAWTTL*KRSTSSSPQPWMET
Trigger: TGTTTCCATCCAAGGCTGGGGGCTGGAGGATGTGGACCTTTTCAACAAGGTTGTCCAGGCAGGTTTGAAGACGTTTAGGAGCCAGGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR-3UTR TCA 90 bp CTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGGTGAAAAAGTGGAGGTTAAAGTaGGCCAAGATTGCGCCACTG +
Preference number: 2 (lower is better)
Translates to: LHAPCFKTYVASWACMVKKWRLK*AKIAPL
Trigger: CAGTGGCGCAATCTTGGCTCACTTTAACCTCCACTT...TTTCACCATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000254190.4
3UTR-3UTR GCA 90 bp TGTGCTCACTCTTCGACCCAGGGAGCTGAAAGGGGACGAGCTTCTTCAGGGAGTATCATCTCCATGACCTaGATGACAATGTCGTCCAAG +
Preference number: 2 (lower is better)
Translates to: CAHSSTQGAERGRASSGSIISMT*MTMSSK
Trigger: CTTGGACGACATTGTCATGCAGGTCATGGAGATGAT...ACTCCCTGAAGAAGCTCGTCCCCTTTCAGCTCCCTGGGTCGAAGAGTGAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR-3UTR GCA 90 bp TTCCTGGCTCCTAAACGTCTTCAAACCTGCCTGGACAACCTTGTTGAAAAGGTCGTCCTTCTTGTCCGCTaGAAGGAGAGCCAACATTCT +
Preference number: 2 (lower is better)
Translates to: FLAPKRLQTCLDNLVEKVVLLVR*KESQHS
Trigger: AGAATGTTGGCTCTCCTTGCAGCGGACAAGAAGGAC...GACCTTTTCAACAAGGTTGTCCAGGCAGGTTTGAAGACGTTTAGGAGCCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR-3UTR CCA 90 bp CTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGGTGAAAGGAAATGATCAACTCTaGAAAGCTCTCCTGAAGACA +
Preference number: 2 (lower is better)
Translates to: LHAPCFKTYVASWACMVKGNDQL*KALLKT
Trigger: TGTCTTCAGGAGAGCTTTCCAGAGTTGATCATTTCC...TTTCACCATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254190.4
3UTR-3UTR TCA 90 bp GTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCAAGAAGATGTGTTCAAAGGGCAGGGGAATTGCTTaGACCAGGGAAGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: VKVKQVCYIMFSKKMCSKGRGIA*TREVEV
Trigger: AACCTCCACTTCCCTGGTTCAAGCAATTCCCCTGCC...CTTTGAACACATCTTCTTGCTGAACATTATGTAGCAGACCTGCTTAACTTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254190.4
3UTR-3UTR CCA 90 bp GTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCAAGAAGATGTGTTCAAAGGTCTTCAAACCTGCCTaGACAACCTTGTTGAAAAGG +
Preference number: 2 (lower is better)
Translates to: VKVKQVCYIMFSKKMCSKVFKPA*TTLLKR
Trigger: CCTTTTCAACAAGGTTGTCCAGGCAGGTTTGAAGAC...CTTTGAACACATCTTCTTGCTGAACATTATGTAGCAGACCTGCTTAACTTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR-3UTR CCA 90 bp GTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCAAGAAGATGTGTTCAAAGCATAGGTCGATGCTTTaGACCCCAAGCACATTTTGT +
Preference number: 2 (lower is better)
Translates to: VKVKQVCYIMFSKKMCSKHRSML*TPSTFC
Trigger: ACAAAATGTGCTTGGGGTCCAAAGCATCGACCTATG...CTTTGAACACATCTTCTTGCTGAACATTATGTAGCAGACCTGCTTAACTTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR CAA 90 bp TGTTCAGCAAGAAGATGTGTTCAAAGGCAAACACTGATCACCTTCTaGTTCAGAAAGCTCAATCTTAAAGGAGTCCTATGTAAGAAAACC +
Preference number: 2 (lower is better)
Translates to: CSARRCVQRQTLITF*FRKLNLKGVLCKKT
Trigger: GGTTTTCTTACATAGGACTCCTTTAAGATTGAGCTTTCTGAACAAGAAGGTGATCAGTGTTTGCCTTTGAACACATCTTCTTGCTGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
3UTR-3UTR GCA 90 bp GGTAGAATCTGTGGAATGTTAACAATCACAACAGAACATTTACCAGAGTTACAGAATGTTCACGTTTTCTaGCATAGGACTGGAGCAAAG +
Preference number: 2 (lower is better)
Translates to: GRICGMLTITTEHLPELQNVHVF*HRTGAK
Trigger: CTTTGCTCCAGTCCTATGGCAGAAAACGTGAACATT...CTGTAACTCTGGTAAATGTTCTGTTGTGATTGTTAACATTCCACAGATTCTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254190.4
3UTR-3UTR TCA 90 bp GTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCAAGAAGATGTGTTCAAAGATGCCAAATCCTTCTTaGAATTTAATGCCAGGTCTA +
Preference number: 2 (lower is better)
Translates to: VKVKQVCYIMFSKKMCSKMPNPS*NLMPGL
Trigger: TAGACCTGGCATTAAATTTCAAGAAGGATTTGGCAT...CTTTGAACACATCTTCTTGCTGAACATTATGTAGCAGACCTGCTTAACTTTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254190.4
3UTR CCA 72 bp ATGACCTGCATGACAATGTCGTCCAAGGCTTCCCTCTaGGCGGAGTCCATTCCTCTTCGAGGGGGCTGGCCG +
Preference number: 3 (lower is better)
Translates to: MTCMTMSSKASL*AESIPLRGGWP
Trigger: CGGCCAGCCCCCTCGAAGAGGAATGGACTCCGCCCAGAGGGAAGCCTTGGACGACATTGTCATGCAGGTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR TCA 72 bp CCAGAATCTCCTCTCGCTGGCGGGGCTGAAACCTCATaGAGGAGGGAGGGATTCCCAGCTGGAGGTCCTCTT +
Preference number: 3 (lower is better)
Translates to: PESPLAGGAETS*RREGFPAGGPL
Trigger: AAGAGGACCTCCAGCTGGGAATCCCTCCCTCCTTCATGAGGTTTCAGCCCCGCCAGCGAGAGGAGATTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR TCA 72 bp AACTCCCATTCCAGAATCTCCTCTCGCTGGCGGGGCTaGAACCTCATGAAGGAGGGAGGGATTCCCAGCTGG +
Preference number: 3 (lower is better)
Translates to: NSHSRISSRWRG*NLMKEGGIPSW
Trigger: CCAGCTGGGAATCCCTCCCTCCTTCATGAGGTTTCAGCCCCGCCAGCGAGAGGAGATTCTGGAATGGGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR CCA 72 bp GAAGCAGCAGGTCCAGGATGTACTCAGCCCCATACATaGGGTTCACCCGGCGGTAGCCGTACTGGATCTCTT +
Preference number: 3 (lower is better)
Translates to: EAAGPGCTQPHT*GSPGGSRTGSL
Trigger: AAGAGATCCAGTACGGCTACCGCCGGGTGAACCCCATGTATGGGGCTGAGTACATCCTGGACCTGCTGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR-3UTR CAA 90 bp TCTTGGCCAACTCTTGTGCATCCAGCTCCTCATGCTCCACAAACTGGATTTTGCCGCGGTGCAGCTGTATaGTGCGATGGCGGAGCTCGG +
Preference number: 3 (lower is better)
Translates to: SWPTLVHPAPHAPQTGFCRGAAV*CDGGAR
Trigger: CCGAGCTCCGCCATCGCACAATACAGCTGCACCGCG...GCAAAATCCAGTTTGTGGAGCATGAGGAGCTGGATGCACAAGAGTTGGCCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR GCA 72 bp GCAGCTGTATTGTGCGATGGCGGAGCTCGGATATCTTaGGGCTCAGCATGTAGCTGTGGAGCCTGTACTGGT +
Preference number: 3 (lower is better)
Translates to: AAVLCDGGARIS*GSACSCGACTG
Trigger: ACCAGTACAGGCTCCACAGCTACATGCTGAGCCGCAAGATATCCGAGCTCCGCCATCGCACAATACAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR CCA 72 bp TCCCTCTGGGCGGAGTCCATTCCTCTTCGAGGGGGCTaGCCGTCAACTGCCGAATACAAGTATTTTCCAGTC +
Preference number: 3 (lower is better)
Translates to: SLWAESIPLRGG*PSTAEYKYFPV
Trigger: GACTGGAAAATACTTGTATTCGGCAGTTGACGGCCAGCCCCCTCGAAGAGGAATGGACTCCGCCCAGAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR-3UTR CAA 90 bp TGCCTTCTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGAGGCAGGGGAATTGCTaGAACCAGGGAAGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: CLLHAPCFKTYVASWACMRQGNC*NQGSGG
Trigger: ACCTCCACTTCCCTGGTTCAAGCAATTCCCCTGCCT...CATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAGAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254190.4
3UTR GCA 72 bp CAGCCACATACCTCACTGTGCCTTCTTCACGCCCCTTaGTTTAAAACCTACGTGGCCAGCTGGGCTTGCATG +
Preference number: 3 (lower is better)
Translates to: QPHTSLCLLHAP*FKTYVASWACM
Trigger: CATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAGAAGGCACAGTGAGGTATGTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254190.4
3UTR TCA 72 bp CCCAGCTACTCGGGAGGCAAAGGCAGGGGAATTGCTTaGACCAGGGAAGTGGAGGTTAAAGTGAGCCAAGAT +
Preference number: 3 (lower is better)
Translates to: PSYSGGKGRGIA*TREVEVKVSQD
Trigger: ATCTTGGCTCACTTTAACCTCCACTTCCCTGGTTCAAGCAATTCCCCTGCCTTTGCCTCCCGAGTAGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254190.4
3UTR GCA 72 bp CATCTCAGCCAGCTGCTGGGTGGACCCATAGGTCGATaGTTTGGACCCCAAGCACATTTTGTACTGTTTGGG +
Preference number: 3 (lower is better)
Translates to: HLSQLLGGPIGR*FGPQAHFVLFG
Trigger: CCCAAACAGTACAAAATGTGCTTGGGGTCCAAAGCATCGACCTATGGGTCCACCCAGCAGCTGGCTGAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR TCA 72 bp TTGGGTTCTTTGTGCTCACTCTTCGACCCAGGGAGCTaGAAGGGGACGAGCTTCTTCAGGGAGTTTGAGAGA +
Preference number: 3 (lower is better)
Translates to: LGSLCSLFDPGS*KGTSFFREFER
Trigger: TCTCTCAAACTCCCTGAAGAAGCTCGTCCCCTTTCAGCTCCCTGGGTCGAAGAGTGAGCACAAAGAACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR CCA 72 bp AAGACAGGATGGTGGACGTGGACTACTCCTACTTCCTaGCTCCTAAACGTCTTCAAACCTGCCTGGACAACC +
Preference number: 3 (lower is better)
Translates to: KTGWWTWTTPTS*LLNVFKPAWTT
Trigger: GGTTGTCCAGGCAGGTTTGAAGACGTTTAGGAGCCAGGAAGTAGGAGTAGTCCACGTCCACCATCCTGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR-3UTR CAA 90 bp TTCCTGGCTCCTAAACGTCTTCAAACCTGCCTGGACAACCTTGTTGAAAAGGTCATGCGCCCTCTGGTCTaGGCGTTGGCATTGATCATC +
Preference number: 3 (lower is better)
Translates to: FLAPKRLQTCLDNLVEKVMRPLV*ALALII
Trigger: GATGATCAATGCCAACGCCAAGACCAGAGGGCGCAT...GACCTTTTCAACAAGGTTGTCCAGGCAGGTTTGAAGACGTTTAGGAGCCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR-3UTR CAA 90 bp TCTTGGCCAACTCTTGTGCATCCAGCTCCTCATGCTCCACAAACTGGATTTTGCCCGTACTGGATCTCTTaGAAGTCAATGATGCGCCCT +
Preference number: 3 (lower is better)
Translates to: SWPTLVHPAPHAPQTGFCPYWIS*KSMMRP
Trigger: AGGGCGCATCATTGACTTCAAAGAGATCCAGTACGG...GCAAAATCCAGTTTGTGGAGCATGAGGAGCTGGATGCACAAGAGTTGGCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR-3UTR CAA 90 bp TTCCTGGCTCCTAAACGTCTTCAAACCTGCCTGGACAACCTTGTTGAAAAGGTCTCTCTTGGCCAACTCTaGTGCATCCAGCTCCTCATG +
Preference number: 3 (lower is better)
Translates to: FLAPKRLQTCLDNLVEKVSLGQL*CIQLLM
Trigger: CATGAGGAGCTGGATGCACAAGAGTTGGCCAAGAGA...GACCTTTTCAACAAGGTTGTCCAGGCAGGTTTGAAGACGTTTAGGAGCCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR TCA 72 bp CATCCAGCTCCTCATGCTCCACAAACTGGATTTTGCTaGAAGTCTGCTGTAAATACGCGTGCCTCCTCACAG +
Preference number: 3 (lower is better)
Translates to: HPAPHAPQTGFC*KSAVNTRASSQ
Trigger: CTGTGAGGAGGCACGCGTATTTACAGCAGACTTTCAGCAAAATCCAGTTTGTGGAGCATGAGGAGCTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR-3UTR CAA 90 bp GTGGACGTGGACTACTCCTACTTCCTGGCTCCTAAACGTCTTCAAACCTGCCTGTCTGTGTTGCTGTATTaGCTCATCAGGACAATTTCG +
Preference number: 3 (lower is better)
Translates to: VDVDYSYFLAPKRLQTCLSVLLY*LIRTIS
Trigger: CGAAATTGTCCTGATGAGCAAATACAGCAACACAGA...CAGGCAGGTTTGAAGACGTTTAGGAGCCAGGAAGTAGGAGTAGTCCACGTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR GCA 72 bp AATGAACTACCACGAGAACAGCCACATACCTCACTGTaGCTTCTTCACGCCCCTTGCTTTAAAACCTACGTG +
Preference number: 3 (lower is better)
Translates to: NELPREQPHTSL*LLHAPCFKTYV
Trigger: CACGTAGGTTTTAAAGCAAGGGGCGTGAAGAAGGCACAGTGAGGTATGTGGCTGTTCTCGTGGTAGTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254190.4
3UTR GCA 72 bp TACTCCTACTTCCTGGCTCCTAAACGTCTTCAAACCTaGCTGGACAACCTTGTTGAAAAGGTCCACATCCTC +
Preference number: 3 (lower is better)
Translates to: YSYFLAPKRLQT*LDNLVEKVHIL
Trigger: GAGGATGTGGACCTTTTCAACAAGGTTGTCCAGGCAGGTTTGAAGACGTTTAGGAGCCAGGAAGTAGGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR CCA 72 bp TCAAGATTGGGATCACAAAAGACAGGATGGTGGACGTaGACTACTCCTACTTCCTGGCTCCTAAACGTCTTC +
Preference number: 3 (lower is better)
Translates to: SRLGSQKTGWWT*TTPTSWLLNVF
Trigger: GAAGACGTTTAGGAGCCAGGAAGTAGGAGTAGTCCACGTCCACCATCCTGTCTTTTGTGATCCCAATCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR-3UTR CAA 90 bp CTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGGTGAAAACACTGATCACCTTCTaGTTCAGAAAGCTCAATCTT +
Preference number: 3 (lower is better)
Translates to: LHAPCFKTYVASWACMVKTLITF*FRKLNL
Trigger: AAGATTGAGCTTTCTGAACAAGAAGGTGATCAGTGT...TTTCACCATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254190.4
3UTR-3UTR CAA 90 bp TTCCTGGCTCCTAAACGTCTTCAAACCTGCCTGGACAACCTTGTTGAAAAGGTCTTCCCTTTGTGCTTTTaGTACAGAAGCAGCAGGTCC +
Preference number: 3 (lower is better)
Translates to: FLAPKRLQTCLDNLVEKVFPLCF*YRSSRS
Trigger: GGACCTGCTGCTTCTGTACAAAAAGCACAAAGGGAA...GACCTTTTCAACAAGGTTGTCCAGGCAGGTTTGAAGACGTTTAGGAGCCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR TCA 72 bp AGGGAGTTTGAGAGAAAGGACAAGGATCCAGATTCCTaGTTGATTCTCTTGGCCAACTCTTGTGCATCCAGC +
Preference number: 3 (lower is better)
Translates to: REFERKDKDPDS*LILLANSCASS
Trigger: GCTGGATGCACAAGAGTTGGCCAAGAGAATCAATCAGGAATCTGGATCCTTGTCCTTTCTCTCAAACTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR GCA 72 bp ATTCTCTTGGCCAACTCTTGTGCATCCAGCTCCTCATaGTCCACAAACTGGATTTTGCTGAAAGTCTGCTGT +
Preference number: 3 (lower is better)
Translates to: ILLANSCASSSS*STNWILLKVCC
Trigger: ACAGCAGACTTTCAGCAAAATCCAGTTTGTGGAGCATGAGGAGCTGGATGCACAAGAGTTGGCCAAGAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR CCA 72 bp AACTCTTGTGCATCCAGCTCCTCATGCTCCACAAACTaGATTTTGCTGAAAGTCTGCTGTAAATACGCGTGC +
Preference number: 3 (lower is better)
Translates to: NSCASSSSCSTN*ILLKVCCKYAC
Trigger: GCACGCGTATTTACAGCAGACTTTCAGCAAAATCCAGTTTGTGGAGCATGAGGAGCTGGATGCACAAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR GCA 72 bp TCCAGATTCCTGATTGATTCTCTTGGCCAACTCTTGTaGATCCAGCTCCTCATGCTCCACAAACTGGATTTT +
Preference number: 3 (lower is better)
Translates to: SRFLIDSLGQLL*IQLLMLHKLDF
Trigger: AAAATCCAGTTTGTGGAGCATGAGGAGCTGGATGCACAAGAGTTGGCCAAGAGAATCAATCAGGAATCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR GCA 72 bp GTTACAATAATACTTTGCAGGAATGTTCACGTTTTCTaGCATAGGACTGGAGCAAAGGGTCTCAAAAGAAAA +
Preference number: 3 (lower is better)
Translates to: VTIILCRNVHVF*HRTGAKGLKRK
Trigger: TTTTCTTTTGAGACCCTTTGCTCCAGTCCTATGGCAGAAAACGTGAACATTCCTGCAAAGTATTATTGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254190.4
3UTR-3UTR CAA 90 bp GTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCAAGAAGATGTGTTCAAAGAATGCCAAATCCTTCTaGAAATTTAATGCCAGGTCT +
Preference number: 3 (lower is better)
Translates to: VKVKQVCYIMFSKKMCSKNAKSF*KFNARS
Trigger: AGACCTGGCATTAAATTTCAAGAAGGATTTGGCATT...CTTTGAACACATCTTCTTGCTGAACATTATGTAGCAGACCTGCTTAACTTTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254190.4
3UTR TCA 72 bp AATGTTCAGCAAGAAGATGTGTTCAAAGGCAAACACTaGTCACCTTCTTGTTCAGAAAGCTCAATCTTAAAG +
Preference number: 3 (lower is better)
Translates to: NVQQEDVFKGKH*SPSCSESSILK
Trigger: CTTTAAGATTGAGCTTTCTGAACAAGAAGGTGATCAGTGTTTGCCTTTGAACACATCTTCTTGCTGAACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
3UTR GCA 72 bp TTACCAGAGTTACAGTGTTTTGTTACAATAATACTTTaGAGGAATGTTCACGTTTTCTGCCATAGGACTGGA +
Preference number: 3 (lower is better)
Translates to: LPELQCFVTIIL*RNVHVFCHRTG
Trigger: TCCAGTCCTATGGCAGAAAACGTGAACATTCCTGCAAAGTATTATTGTAACAAAACACTGTAACTCTGGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254190.4
3UTR-3UTR CAA 90 bp AAAAAGTTTTGTTCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACACACTGATCACCTTCTaGTTCAGAAAGCTCAATCTT +
Preference number: 3 (lower is better)
Translates to: KKFCSSGTFQVKVKQVCYTLITF*FRKLNL
Trigger: AAGATTGAGCTTTCTGAACAAGAAGGTGATCAGTGT...GTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGAACAAAACTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR TCA 90 bp TGCCTTCTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGACGCACGGCGCGTTATaGAGTGGCCCCGCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: CLLHAPCFKTYVASWACMTHGAL*SGPAGG
Trigger: GCCGCCGGCGGGGCCACTTCATAACGCGCCGTGCGT...CATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAGAAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR CCA 90 bp CTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGGTGAAACGGCGCGTTATGAAGTaGCCCCGCCGGCGGCGAGCC +
Preference number: 4 (lower is better)
Translates to: LHAPCFKTYVASWACMVKRRVMK*PRRRRA
Trigger: GGCTCGCCGCCGGCGGGGCCACTTCATAACGCGCCG...TTTCACCATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR CCA 90 bp CTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGGTGAAACCCGCGTCCTCCGGCTaGCTGGGCTCGGTTCGCACG +
Preference number: 4 (lower is better)
Translates to: LHAPCFKTYVASWACMVKPASSG*LGSVRT
Trigger: CGTGCGAACCGAGCCCAGCCAGCCGGAGGACGCGGG...TTTCACCATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR GCA 90 bp CTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGGTGAAACCCGCCGCCGCGGCCTaGGCCTTTAAGAGGGGACCA +
Preference number: 4 (lower is better)
Translates to: LHAPCFKTYVASWACMVKPAAAA*AFKRGP
Trigger: TGGTCCCCTCTTAAAGGCGCAGGCCGCGGCGGCGGG...TTTCACCATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR CCA 90 bp AGGCTTCCCTCTGGGCGGAGTCCATTCCTCTTCGAGGGGGCTGGCCGTCAACTGTCCAAGGCTTCCCTCTaGGCGGAGTCCATTCCTCTT +
Preference number: 4 (lower is better)
Translates to: RLPSGRSPFLFEGAGRQLSKASL*AESIPL
Trigger: AAGAGGAATGGACTCCGCCCAGAGGGAAGCCTTGGA...CAGTTGACGGCCAGCCCCCTCGAAGAGGAATGGACTCCGCCCAGAGGGAAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR CCA 90 bp CTCTGGGCGGAGTCCATTCCTCTTCGAGGGGGCTGGCCGTCAACTGCCGAATACCAGCCAGCTGCTGGGTaGACCCATAGGTCGATGCTT +
Preference number: 4 (lower is better)
Translates to: LWAESIPLRGGWPSTAEYQPAAG*THRSML
Trigger: AAGCATCGACCTATGGGTCCACCCAGCAGCTGGCTG...GTATTCGGCAGTTGACGGCCAGCCCCCTCGAAGAGGAATGGACTCCGCCCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR CCA 90 bp CAATTTCGCGGTGCAGCTGTATTGTGCGATGGCGGAGCTCGGATATCTTGCGGCCCTCTTCGAGGGGGCTaGCCGTCAACTGCCGAATAC +
Preference number: 4 (lower is better)
Translates to: QFRGAAVLCDGGARISCGPLRGG*PSTAEY
Trigger: GTATTCGGCAGTTGACGGCCAGCCCCCTCGAAGAGG...GCCGCAAGATATCCGAGCTCCGCCATCGCACAATACAGCTGCACCGCGAAATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR GCA 90 bp CTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGGTGAAAGCCACGGCCCGAGTCTaGAGGTATTTCTGGGCGGTC +
Preference number: 4 (lower is better)
Translates to: LHAPCFKTYVASWACMVKATARV*RYFWAV
Trigger: GACCGCCCAGAAATACCTGCAGACTCGGGCCGTGGC...TTTCACCATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR GCA 90 bp CTACCACGAGAACAGCCACATACCTCACTGTGCCTTCTTCACGCCCCTTGCTTTGTGCCCAGGCCTGTCTaGCCAAGAAAGAGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: LPREQPHTSLCLLHAPCFVPRPV*PRKRGS
Trigger: CGAGCCCCTCTTTCTTGGGCAGACAGGCCTGGGCAC...AAAGCAAGGGGCGTGAAGAAGGCACAGTGAGGTATGTGGCTGTTCTCGTGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR GCA 90 bp CAATTTCGCGGTGCAGCTGTATTGTGCGATGGCGGAGCTCGGATATCTTGCGGCGACACACTGCACCCCTaGAAACCTCCGGACACACCT +
Preference number: 4 (lower is better)
Translates to: QFRGAAVLCDGGARISCGDTLHP*KPPDTP
Trigger: AGGTGTGTCCGGAGGTTTGCAGGGGTGCAGTGTGTC...GCCGCAAGATATCCGAGCTCCGCCATCGCACAATACAGCTGCACCGCGAAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR CCA 90 bp CTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGGTGAAACCTCTTCGAGGGGGCTaGCCGTCAACTGCCGAATAC +
Preference number: 4 (lower is better)
Translates to: LHAPCFKTYVASWACMVKPLRGG*PSTAEY
Trigger: GTATTCGGCAGTTGACGGCCAGCCCCCTCGAAGAGG...TTTCACCATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR CCA 90 bp TGCCTTCTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGCAGCCAGCTGCTGGGTaGACCCATAGGTCGATGCTT +
Preference number: 4 (lower is better)
Translates to: CLLHAPCFKTYVASWACMQPAAG*THRSML
Trigger: AAGCATCGACCTATGGGTCCACCCAGCAGCTGGCTG...CATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAGAAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR TCA 90 bp AGGCTTCCCTCTGGGCGGAGTCCATTCCTCTTCGAGGGGGCTGGCCGTCAACTGATCCAGATTCCTGATTaGTTCTCTTGGCCAACTCTT +
Preference number: 4 (lower is better)
Translates to: RLPSGRSPFLFEGAGRQLIQIPD*FSWPTL
Trigger: AAGAGTTGGCCAAGAGAATCAATCAGGAATCTGGAT...CAGTTGACGGCCAGCCCCCTCGAAGAGGAATGGACTCCGCCCAGAGGGAAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR GCA 90 bp CTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGGTGAAAGGCTTAGCTCGCCATTaGAACAGGAGCCCCTCACGT +
Preference number: 4 (lower is better)
Translates to: LHAPCFKTYVASWACMVKGLARH*NRSPSR
Trigger: ACGTGAGGGGCTCCTGTTGCAATGGCGAGCTAAGCC...TTTCACCATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR GCA 90 bp TGCCTTCTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGGGTGCAGCTGTATTGTaGGATGGCGGAGCTCGGATA +
Preference number: 4 (lower is better)
Translates to: CLLHAPCFKTYVASWACMGAAVL*DGGARI
Trigger: TATCCGAGCTCCGCCATCGCACAATACAGCTGCACC...CATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAGAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR CCA 90 bp CTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGGTGAAACCACGTCCTCATGGGTaGTGTACATCTCCCGGAGAC +
Preference number: 4 (lower is better)
Translates to: LHAPCFKTYVASWACMVKPRPHG*CTSPGD
Trigger: GTCTCCGGGAGATGTACACCACCCATGAGGACGTGG...TTTCACCATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR CCA 90 bp CTCTGGGCGGAGTCCATTCCTCTTCGAGGGGGCTGGCCGTCAACTGCCGAATACCATAGGTCGATGCTTTaGACCCCAAGCACATTTTGT +
Preference number: 4 (lower is better)
Translates to: LWAESIPLRGGWPSTAEYHRSML*TPSTFC
Trigger: ACAAAATGTGCTTGGGGTCCAAAGCATCGACCTATG...GTATTCGGCAGTTGACGGCCAGCCCCCTCGAAGAGGAATGGACTCCGCCCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR TCA 90 bp CAATTTCGCGGTGCAGCTGTATTGTGCGATGGCGGAGCTCGGATATCTTGCGGCCCTGGACAACCTTGTTaGAAAGGTCCACATCCTCCA +
Preference number: 4 (lower is better)
Translates to: QFRGAAVLCDGGARISCGPGQPC*KGPHPP
Trigger: TGGAGGATGTGGACCTTTTCAACAAGGTTGTCCAGG...GCCGCAAGATATCCGAGCTCCGCCATCGCACAATACAGCTGCACCGCGAAATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR GCA 90 bp TGCCTTCTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGAGACACTTGCCAATGTaGGGCACCATTCTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: CLLHAPCFKTYVASWACMRHLPM*GTILRS
Trigger: GCTTCGGAGAATGGTGCCGCACATTGGCAAGTGTCT...CATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAGAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR GCA 90 bp TGCCTTCTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGGGACCCATAGGTCGATaGTTTGGACCCCAAGCACAT +
Preference number: 4 (lower is better)
Translates to: CLLHAPCFKTYVASWACMGPIGR*FGPQAH
Trigger: ATGTGCTTGGGGTCCAAAGCATCGACCTATGGGTCC...CATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAGAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR GCA 90 bp CTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGGTGAAACCACATACCTCACTGTaGCTTCTTCACGCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: LHAPCFKTYVASWACMVKPHTSL*LLHAPC
Trigger: GCAAGGGGCGTGAAGAAGGCACAGTGAGGTATGTGG...TTTCACCATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR CCA 90 bp CTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGGTGAAAGTCTGCAGGTATTTCTaGGCGGTCATGACTCCCACG +
Preference number: 4 (lower is better)
Translates to: LHAPCFKTYVASWACMVKVCRYF*AVMTPT
Trigger: CGTGGGAGTCATGACCGCCCAGAAATACCTGCAGAC...TTTCACCATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254190.4
3UTR CAA 72 bp CTTGTTGAAAAGGTCCACATCCTCCAGCCCCCAGCCTaGGATGGAAACATCAAAGCCACCCACTCGGACAAG +
Preference number: 4 (lower is better)
Translates to: LVEKVHILQPPA*DGNIKATHSDK
Trigger: CTTGTCCGAGTGGGTGGCTTTGATGTTTCCATCCAAGGCTGGGGGCTGGAGGATGTGGACCTTTTCAACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR CAA 72 bp CTCCTAAACGTCTTCAAACCTGCCTGGACAACCTTGTaGAAAAGGTCCACATCCTCCAGCCCCCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LLNVFKPAWTTL*KRSTSSSPQPW
Trigger: CCAAGGCTGGGGGCTGGAGGATGTGGACCTTTTCAACAAGGTTGTCCAGGCAGGTTTGAAGACGTTTAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543813.2
3UTR CAA 72 bp TGGCTCCTAAACGTCTTCAAACCTGCCTGGACAACCTaGTTGAAAAGGTCCACATCCTCCAGCCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: WLLNVFKPAWTT*LKRSTSSSPQP
Trigger: AGGCTGGGGGCTGGAGGATGTGGACCTTTTCAACAAGGTTGTCCAGGCAGGTTTGAAGACGTTTAGGAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR TCA 90 bp TGCCTTCTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGAAGTGGAGGTTAAAGTaGGCCAAGATTGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: CLLHAPCFKTYVASWACMKWRLK*AKIAPL
Trigger: CAGTGGCGCAATCTTGGCTCACTTTAACCTCCACTT...CATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAGAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR GCA 90 bp CTACCACGAGAACAGCCACATACCTCACTGTGCCTTCTTCACGCCCCTTGCTTTGGAGCTCGGATATCTTaGGGCTCAGCATGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: LPREQPHTSLCLLHAPCFGARIS*GSACSC
Trigger: ACAGCTACATGCTGAGCCGCAAGATATCCGAGCTCC...AAAGCAAGGGGCGTGAAGAAGGCACAGTGAGGTATGTGGCTGTTCTCGTGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR GCA 90 bp GGGTGGACCCATAGGTCGATGCTTTGGACCCCAAGCACATTTTGTACTGTTTGGGGTGCAGCTGTATTGTaGGATGGCGGAGCTCGGATA +
Preference number: 4 (lower is better)
Translates to: GWTHRSMLWTPSTFCTVWGAAVL*DGGARI
Trigger: TATCCGAGCTCCGCCATCGCACAATACAGCTGCACC...CCAAACAGTACAAAATGTGCTTGGGGTCCAAAGCATCGACCTATGGGTCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR GCA 90 bp CGGAGTCCATTCCTCTTCGAGGGGGCTGGCCGTCAACTGCCGAATACAAGTATTAGGACAATTTCGCGGTaGAGCTGTATTGTGCGATGG +
Preference number: 4 (lower is better)
Translates to: RSPFLFEGAGRQLPNTSIRTISR*SCIVRW
Trigger: CCATCGCACAATACAGCTGCACCGCGAAATTGTCCT...AATACTTGTATTCGGCAGTTGACGGCCAGCCCCCTCGAAGAGGAATGGACTCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR GCA 90 bp ATCATCTCCATGACCTGCATGACAATGTCGTCCAAGGCTTCCCTCTGGGCGGAGGGGCTGGCCGTCAACTaGCGAATACAAGTATTTTCC +
Preference number: 4 (lower is better)
Translates to: IISMTCMTMSSKASLWAEGLAVN*RIQVFS
Trigger: GGAAAATACTTGTATTCGGCAGTTGACGGCCAGCCC...CTCCGCCCAGAGGGAAGCCTTGGACGACATTGTCATGCAGGTCATGGAGATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR GCA 90 bp CAATTTCGCGGTGCAGCTGTATTGTGCGATGGCGGAGCTCGGATATCTTGCGGCGCATCCAGCTCCTCATaGTCCACAAACTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: QFRGAAVLCDGGARISCGASSSS*STNWIL
Trigger: CAAAATCCAGTTTGTGGAGCATGAGGAGCTGGATGC...GCCGCAAGATATCCGAGCTCCGCCATCGCACAATACAGCTGCACCGCGAAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR GCA 90 bp CTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGGTGAAACTTGGCCAACTCTTGTaGATCCAGCTCCTCATGCTC +
Preference number: 4 (lower is better)
Translates to: LHAPCFKTYVASWACMVKLGQLL*IQLLML
Trigger: GAGCATGAGGAGCTGGATGCACAAGAGTTGGCCAAG...TTTCACCATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR GCA 90 bp TGCCTTCTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGTCTTTGGGTTCTTTGTaGTCACTCTTCGACCCAGGG +
Preference number: 4 (lower is better)
Translates to: CLLHAPCFKTYVASWACMSLGSL*SLFDPG
Trigger: CCCTGGGTCGAAGAGTGAGCACAAAGAACCCAAAGA...CATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAGAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR GCA 90 bp TGCCTTCTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGCTTCTTCACGCCCCTTaGTTTAAAACCTACGTGGCC +
Preference number: 4 (lower is better)
Translates to: CLLHAPCFKTYVASWACMLLHAP*FKTYVA
Trigger: GGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAGAAG...CATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAGAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR CCA 90 bp GTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCAAGAAGATGTGTTCAAAGCGTCCTCCGGCTGGCTaGGCTCGGTTCGCACGGCGC +
Preference number: 4 (lower is better)
Translates to: VKVKQVCYIMFSKKMCSKRPPAG*ARFARR
Trigger: GCGCCGTGCGAACCGAGCCCAGCCAGCCGGAGGACG...CTTTGAACACATCTTCTTGCTGAACATTATGTAGCAGACCTGCTTAACTTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR CCA 90 bp TGCCTTCTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGAGCTGTATTGTGCGATaGCGGAGCTCGGATATCTTG +
Preference number: 4 (lower is better)
Translates to: CLLHAPCFKTYVASWACMSCIVR*RSSDIL
Trigger: CAAGATATCCGAGCTCCGCCATCGCACAATACAGCT...CATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAGAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR CCA 90 bp TTCCTGGCTCCTAAACGTCTTCAAACCTGCCTGGACAACCTTGTTGAAAAGGTCACTCAGCCCCATACATaGGGTTCACCCGGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: FLAPKRLQTCLDNLVEKVTQPHT*GSPGGS
Trigger: GCTACCGCCGGGTGAACCCCATGTATGGGGCTGAGT...GACCTTTTCAACAAGGTTGTCCAGGCAGGTTTGAAGACGTTTAGGAGCCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR CCA 90 bp TCTTCGACCCAGGGAGCTGAAAGGGGACGAGCTTCTTCAGGGAGTTTGAGAGAATCCAGCCCCCAGCCTTaGATGGAAACATCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: SSTQGAERGRASSGSLRESSPQP*METSKP
Trigger: TGGCTTTGATGTTTCCATCCAAGGCTGGGGGCTGGA...TTCTCTCAAACTCCCTGAAGAAGCTCGTCCCCTTTCAGCTCCCTGGGTCGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR CCA 90 bp GTGGACGTGGACTACTCCTACTTCCTGGCTCCTAAACGTCTTCAAACCTGCCTGACAGGATGGTGGACGTaGACTACTCCTACTTCCTGG +
Preference number: 4 (lower is better)
Translates to: VDVDYSYFLAPKRLQTCLTGWWT*TTPTSW
Trigger: CCAGGAAGTAGGAGTAGTCCACGTCCACCATCCTGT...CAGGCAGGTTTGAAGACGTTTAGGAGCCAGGAAGTAGGAGTAGTCCACGTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR TCA 90 bp CTACCACGAGAACAGCCACATACCTCACTGTGCCTTCTTCACGCCCCTTGCTTTCCAGACGGTCTCCTTTaGTGTACACGTCATCATCTG +
Preference number: 4 (lower is better)
Translates to: LPREQPHTSLCLLHAPCFPDGLL*CTRHHL
Trigger: CAGATGATGACGTGTACATCAAAGGAGACCGTCTGG...AAAGCAAGGGGCGTGAAGAAGGCACAGTGAGGTATGTGGCTGTTCTCGTGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR TCA 90 bp TGCCTTCTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGCTTCTTCAGGGAGTTTaGGAGAAAGGACAAGGATCC +
Preference number: 4 (lower is better)
Translates to: CLLHAPCFKTYVASWACMLLQGV*EKGQGS
Trigger: GGATCCTTGTCCTTTCTCTCAAACTCCCTGAAGAAG...CATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAGAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR TCA 90 bp TTCTTCCCTTTGTGCTTTTTGTACAGAAGCAGCAGGTCCAGGATGTACTCAGCCTTCGACCCAGGGAGCTaGAAGGGGACGAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: FFPLCFLYRSSRSRMYSAFDPGS*KGTSFF
Trigger: GAAGAAGCTCGTCCCCTTTCAGCTCCCTGGGTCGAA...GGCTGAGTACATCCTGGACCTGCTGCTTCTGTACAAAAAGCACAAAGGGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR GCA 90 bp CTACCACGAGAACAGCCACATACCTCACTGTGCCTTCTTCACGCCCCTTGCTTTGGGCTGGCCGTCAACTaGCGAATACAAGTATTTTCC +
Preference number: 4 (lower is better)
Translates to: LPREQPHTSLCLLHAPCFGLAVN*RIQVFS
Trigger: GGAAAATACTTGTATTCGGCAGTTGACGGCCAGCCC...AAAGCAAGGGGCGTGAAGAAGGCACAGTGAGGTATGTGGCTGTTCTCGTGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR GCA 90 bp GTGGACGTGGACTACTCCTACTTCCTGGCTCCTAAACGTCTTCAAACCTGCCTGGTCCTTCTTGTCCGCTaGAAGGAGAGCCAACATTCT +
Preference number: 4 (lower is better)
Translates to: VDVDYSYFLAPKRLQTCLVLLVR*KESQHS
Trigger: AGAATGTTGGCTCTCCTTGCAGCGGACAAGAAGGAC...CAGGCAGGTTTGAAGACGTTTAGGAGCCAGGAAGTAGGAGTAGTCCACGTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR CCA 90 bp CTACCACGAGAACAGCCACATACCTCACTGTGCCTTCTTCACGCCCCTTGCTTTTCCCAGGAATTGTCTTaGACCATGTTCTGTAGGCGG +
Preference number: 4 (lower is better)
Translates to: LPREQPHTSLCLLHAPCFSQELS*TMFCRR
Trigger: CCGCCTACAGAACATGGTCCAAGACAATTCCTGGGA...AAAGCAAGGGGCGTGAAGAAGGCACAGTGAGGTATGTGGCTGTTCTCGTGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR CCA 90 bp TGCCTGGACAACCTTGTTGAAAAGGTCCACATCCTCCAGCCCCCAGCCTTGGATCAAAAGACAGGATGGTaGACGTGGACTACTCCTACT +
Preference number: 4 (lower is better)
Translates to: CLDNLVEKVHILQPPALDQKTGW*TWTTPT
Trigger: AGTAGGAGTAGTCCACGTCCACCATCCTGTCTTTTG...ATCCAAGGCTGGGGGCTGGAGGATGTGGACCTTTTCAACAAGGTTGTCCAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR CCA 90 bp ATCATCTCCATGACCTGCATGACAATGTCGTCCAAGGCTTCCCTCTGGGCGGAGTCACAAAAGACAGGATaGTGGACGTGGACTACTCCT +
Preference number: 4 (lower is better)
Translates to: IISMTCMTMSSKASLWAESQKTG*WTWTTP
Trigger: AGGAGTAGTCCACGTCCACCATCCTGTCTTTTGTGA...CTCCGCCCAGAGGGAAGCCTTGGACGACATTGTCATGCAGGTCATGGAGATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR CCA 90 bp TGCCTTCTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGCTTTTCCAGCAAAGCTaGACATTAGGCTGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: CLLHAPCFKTYVASWACMLFQQS*TLGCPH
Trigger: GTGAGGACAGCCTAATGTCCAGCTTTGCTGGAAAAG...CATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAGAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR TCA 90 bp TGCGATGGCGGAGCTCGGATATCTTGCGGCTCAGCATGTAGCTGTGGAGCCTGTCAAACTGGATTTTGCTaGAAGTCTGCTGTAAATACG +
Preference number: 4 (lower is better)
Translates to: CDGGARISCGSACSCGACQTGFC*KSAVNT
Trigger: CGTATTTACAGCAGACTTTCAGCAAAATCCAGTTTG...ACAGGCTCCACAGCTACATGCTGAGCCGCAAGATATCCGAGCTCCGCCATCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR TCA 90 bp TGCCTTCTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGCTGAGCAGAGTACCATaGGAGGAAATGATCAACTCT +
Preference number: 4 (lower is better)
Translates to: CLLHAPCFKTYVASWACMLSRVP*EEMINS
Trigger: AGAGTTGATCATTTCCTCTCATGGTACTCTGCTCAG...CATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAGAAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR GCA 90 bp CTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGGTGAAAGCATCCAGCTCCTCATaGTCCACAAACTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: LHAPCFKTYVASWACMVKASSSS*STNWIL
Trigger: CAAAATCCAGTTTGTGGAGCATGAGGAGCTGGATGC...TTTCACCATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR GCA 90 bp TGTGCTCACTCTTCGACCCAGGGAGCTGAAAGGGGACGAGCTTCTTCAGGGAGTAAACGTCTTCAAACCTaGCTGGACAACCTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: CAHSSTQGAERGRASSGSKRLQT*LDNLVE
Trigger: TTCAACAAGGTTGTCCAGGCAGGTTTGAAGACGTTT...ACTCCCTGAAGAAGCTCGTCCCCTTTCAGCTCCCTGGGTCGAAGAGTGAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR CCA 90 bp CTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGGTGAAATCACAAAAGACAGGATaGTGGACGTGGACTACTCCT +
Preference number: 4 (lower is better)
Translates to: LHAPCFKTYVASWACMVKSQKTG*WTWTTP
Trigger: AGGAGTAGTCCACGTCCACCATCCTGTCTTTTGTGA...TTTCACCATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR TCA 90 bp GACAGGATGGTGGACGTGGACTACTCCTACTTCCTGGCTCCTAAACGTCTTCAACTTCTTCAGGGAGTTTaGGAGAAAGGACAAGGATCC +
Preference number: 4 (lower is better)
Translates to: DRMVDVDYSYFLAPKRLQLLQGV*EKGQGS
Trigger: GGATCCTTGTCCTTTCTCTCAAACTCCCTGAAGAAG...TTGAAGACGTTTAGGAGCCAGGAAGTAGGAGTAGTCCACGTCCACCATCCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR GCA 90 bp GGTAGAATCTGTGGAATGTTAACAATCACAACAGAACATTTACCAGAGTTACAGCGCCGCCGCCGCAGCTaGACATCCTCCGGCTTAGCT +
Preference number: 4 (lower is better)
Translates to: GRICGMLTITTEHLPELQRRRRS*TSSGLA
Trigger: AGCTAAGCCGGAGGATGTGCAGCTGCGGCGGCGGCG...CTGTAACTCTGGTAAATGTTCTGTTGTGATTGTTAACATTCCACAGATTCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR GCA 90 bp TTCAAACCTGCCTGGACAACCTTGTTGAAAAGGTCCACATCCTCCAGCCCCCAGATCATCTCCATGACCTaGATGACAATGTCGTCCAAG +
Preference number: 4 (lower is better)
Translates to: FKPAWTTLLKRSTSSSPQIISMT*MTMSSK
Trigger: CTTGGACGACATTGTCATGCAGGTCATGGAGATGAT...CTGGGGGCTGGAGGATGTGGACCTTTTCAACAAGGTTGTCCAGGCAGGTTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR GCA 90 bp TCTTGGCCAACTCTTGTGCATCCAGCTCCTCATGCTCCACAAACTGGATTTTGCGCTACAGACCATCACTaGTACAGAGCGACAACTTCC +
Preference number: 4 (lower is better)
Translates to: SWPTLVHPAPHAPQTGFCATDHH*YRATTS
Trigger: GGAAGTTGTCGCTCTGTAGCAGTGATGGTCTGTAGC...GCAAAATCCAGTTTGTGGAGCATGAGGAGCTGGATGCACAAGAGTTGGCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR CCA 90 bp TCTTGGCCAACTCTTGTGCATCCAGCTCCTCATGCTCCACAAACTGGATTTTGCAGCTGTATTGTGCGATaGCGGAGCTCGGATATCTTG +
Preference number: 4 (lower is better)
Translates to: SWPTLVHPAPHAPQTGFCSCIVR*RSSDIL
Trigger: CAAGATATCCGAGCTCCGCCATCGCACAATACAGCT...GCAAAATCCAGTTTGTGGAGCATGAGGAGCTGGATGCACAAGAGTTGGCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR CCA 90 bp GACAGGATGGTGGACGTGGACTACTCCTACTTCCTGGCTCCTAAACGTCTTCAACTTTTCCAGCAAAGCTaGACATTAGGCTGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: DRMVDVDYSYFLAPKRLQLFQQS*TLGCPH
Trigger: GTGAGGACAGCCTAATGTCCAGCTTTGCTGGAAAAG...TTGAAGACGTTTAGGAGCCAGGAAGTAGGAGTAGTCCACGTCCACCATCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR TCA 90 bp CTACCACGAGAACAGCCACATACCTCACTGTGCCTTCTTCACGCCCCTTGCTTTTCACTTGAGAAGAACTaGACTTTCCCAGGAATTGTC +
Preference number: 4 (lower is better)
Translates to: LPREQPHTSLCLLHAPCFSLEKN*TFPGIV
Trigger: GACAATTCCTGGGAAAGTTCAGTTCTTCTCAAGTGA...AAAGCAAGGGGCGTGAAGAAGGCACAGTGAGGTATGTGGCTGTTCTCGTGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR TCA 90 bp CTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGGTGAAAATCCAGATTCCTGATTaGTTCTCTTGGCCAACTCTT +
Preference number: 4 (lower is better)
Translates to: LHAPCFKTYVASWACMVKIQIPD*FSWPTL
Trigger: AAGAGTTGGCCAAGAGAATCAATCAGGAATCTGGAT...TTTCACCATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254190.4
3UTR CAA 72 bp GGATCCAGATTCCTGATTGATTCTCTTGGCCAACTCTaGTGCATCCAGCTCCTCATGCTCCACAAACTGGAT +
Preference number: 4 (lower is better)
Translates to: GSRFLIDSLGQL*CIQLLMLHKLD
Trigger: ATCCAGTTTGTGGAGCATGAGGAGCTGGATGCACAAGAGTTGGCCAAGAGAATCAATCAGGAATCTGGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR TCA 90 bp GTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCAAGAAGATGTGTTCAAAGTCTCGCTGGCGGGGCTaGAACCTCATGAAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: VKVKQVCYIMFSKKMCSKSRWRG*NLMKEG
Trigger: TCCCTCCTTCATGAGGTTTCAGCCCCGCCAGCGAGA...CTTTGAACACATCTTCTTGCTGAACATTATGTAGCAGACCTGCTTAACTTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR TCA 90 bp TGCCTTCTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGATGCCAAATCCTTCTTaGAATTTAATGCCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: CLLHAPCFKTYVASWACMMPNPS*NLMPGL
Trigger: TAGACCTGGCATTAAATTTCAAGAAGGATTTGGCAT...CATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAGAAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR CCA 90 bp GACAGGATGGTGGACGTGGACTACTCCTACTTCCTGGCTCCTAAACGTCTTCAAGTTTGGGGTCAAGATTaGGATCACAAAAGACAGGAT +
Preference number: 4 (lower is better)
Translates to: DRMVDVDYSYFLAPKRLQVWGQD*DHKRQD
Trigger: ATCCTGTCTTTTGTGATCCCAATCTTGACCCCAAAC...TTGAAGACGTTTAGGAGCCAGGAAGTAGGAGTAGTCCACGTCCACCATCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR TCA 90 bp TCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCGGGGCTGAAACCTCATaGAGGAGGGAGGGATTCCCA +
Preference number: 4 (lower is better)
Translates to: SSGTFQVKVKQVCYIMFSGAETS*RREGFP
Trigger: TGGGAATCCCTCCCTCCTTCATGAGGTTTCAGCCCC...GCTGAACATTATGTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR TCA 90 bp GGTAGAATCTGTGGAATGTTAACAATCACAACAGAACATTTACCAGAGTTACAGTCTCGCTGGCGGGGCTaGAACCTCATGAAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: GRICGMLTITTEHLPELQSRWRG*NLMKEG
Trigger: TCCCTCCTTCATGAGGTTTCAGCCCCGCCAGCGAGA...CTGTAACTCTGGTAAATGTTCTGTTGTGATTGTTAACATTCCACAGATTCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR TCA 90 bp TCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCTTCGACCCAGGGAGCTaGAAGGGGACGAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SSGTFQVKVKQVCYIMFSFDPGS*KGTSFF
Trigger: GAAGAAGCTCGTCCCCTTTCAGCTCCCTGGGTCGAA...GCTGAACATTATGTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR GCA 90 bp GTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCAAGAAGATGTGTTCAAAGGACACACTGCACCCCTaGAAACCTCCGGACACACCT +
Preference number: 4 (lower is better)
Translates to: VKVKQVCYIMFSKKMCSKDTLHP*KPPDTP
Trigger: AGGTGTGTCCGGAGGTTTGCAGGGGTGCAGTGTGTC...CTTTGAACACATCTTCTTGCTGAACATTATGTAGCAGACCTGCTTAACTTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR GCA 90 bp GGTAGAATCTGTGGAATGTTAACAATCACAACAGAACATTTACCAGAGTTACAGGTGGCCAGCTGGGCTTaGATGGTGAAACCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: GRICGMLTITTEHLPELQVASWA*MVKPRL
Trigger: GAGACGGGGTTTCACCATGCAAGCCCAGCTGGCCAC...CTGTAACTCTGGTAAATGTTCTGTTGTGATTGTTAACATTCCACAGATTCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR CCA 90 bp TCTTCGACCCAGGGAGCTGAAAGGGGACGAGCTTCTTCAGGGAGTTTGAGAGAACAAAATGGTTGTCACTaGGAACTTTCCCACTATAAA +
Preference number: 4 (lower is better)
Translates to: SSTQGAERGRASSGSLREQNGCH*ELSHYK
Trigger: TTTATAGTGGGAAAGTTCCCAGTGACAACCATTTTG...TTCTCTCAAACTCCCTGAAGAAGCTCGTCCCCTTTCAGCTCCCTGGGTCGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR TCA 90 bp GGTAGAATCTGTGGAATGTTAACAATCACAACAGAACATTTACCAGAGTTACAGGGGGCTGAAACCTCATaGAGGAGGGAGGGATTCCCA +
Preference number: 4 (lower is better)
Translates to: GRICGMLTITTEHLPELQGAETS*RREGFP
Trigger: TGGGAATCCCTCCCTCCTTCATGAGGTTTCAGCCCC...CTGTAACTCTGGTAAATGTTCTGTTGTGATTGTTAACATTCCACAGATTCTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR GCA 90 bp GTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCAAGAAGATGTGTTCAAAGTGCTGTAAATACGCGTaGCTCCTCACAGGGACCGTC +
Preference number: 4 (lower is better)
Translates to: VKVKQVCYIMFSKKMCSKCCKYA*LLTGTV
Trigger: GACGGTCCCTGTGAGGAGGCACGCGTATTTACAGCA...CTTTGAACACATCTTCTTGCTGAACATTATGTAGCAGACCTGCTTAACTTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR GCA 90 bp AGGAGAGCCAACATTCTCATTAAGTCCTCGTTCTTCCTGTTAACTGTTTACATGCTTGGCCAACTCTTGTaGATCCAGCTCCTCATGCTC +
Preference number: 4 (lower is better)
Translates to: RRANILIKSSFFLLTVYMLGQLL*IQLLML
Trigger: GAGCATGAGGAGCTGGATGCACAAGAGTTGGCCAAG...CATGTAAACAGTTAACAGGAAGAACGAGGACTTAATGAGAATGTTGGCTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR CCA 90 bp GGTAGAATCTGTGGAATGTTAACAATCACAACAGAACATTTACCAGAGTTACAGTTCCCATTTCTTCCGTaGTGCCCAGGCCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: GRICGMLTITTEHLPELQFPFLP*CPGLSA
Trigger: GGCAGACAGGCCTGGGCACCACGGAAGAAATGGGAA...CTGTAACTCTGGTAAATGTTCTGTTGTGATTGTTAACATTCCACAGATTCTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR CCA 90 bp AAAAAGTTTTGTTCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACACTCAGCCCCATACATaGGGTTCACCCGGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: KKFCSSGTFQVKVKQVCYTQPHT*GSPGGS
Trigger: GCTACCGCCGGGTGAACCCCATGTATGGGGCTGAGT...GTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGAACAAAACTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR CCA 90 bp CTTTTTATCTTTGGGTTCTTTGTGCTCACTCTTCGACCCAGGGAGCTGAAAGGGTCATGCTCCACAAACTaGATTTTGCTGAAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: LFIFGFFVLTLRPRELKGSCSTN*ILLKVC
Trigger: GCAGACTTTCAGCAAAATCCAGTTTGTGGAGCATGA...CCCTTTCAGCTCCCTGGGTCGAAGAGTGAGCACAAAGAACCCAAAGATAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR TCA 90 bp AAAAAGTTTTGTTCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACCCTACGTGGCCATGCTaGGCAGAGTACCATGAGAGG +
Preference number: 4 (lower is better)
Translates to: KKFCSSGTFQVKVKQVCYPTWPC*AEYHER
Trigger: CCTCTCATGGTACTCTGCTCAGCATGGCCACGTAGG...GTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGAACAAAACTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR GCA 90 bp AAAAAGTTTTGTTCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACCCATTTCTTCCGTGGTaGCCAGGCCTGTCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: KKFCSSGTFQVKVKQVCYPFLPW*PGLSAQ
Trigger: TTGGGCAGACAGGCCTGGGCACCACGGAAGAAATGG...GTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGAACAAAACTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR GCA 90 bp GTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCAAGAAGATGTGTTCAAAGGGACCCATAGGTCGATaGTTTGGACCCCAAGCACAT +
Preference number: 4 (lower is better)
Translates to: VKVKQVCYIMFSKKMCSKGPIGR*FGPQAH
Trigger: ATGTGCTTGGGGTCCAAAGCATCGACCTATGGGTCC...CTTTGAACACATCTTCTTGCTGAACATTATGTAGCAGACCTGCTTAACTTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR CCA 90 bp AAAAAGTTTTGTTCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACACCTCCACGTCCTCATaGGTGGTGTACATCTCCCGG +
Preference number: 4 (lower is better)
Translates to: KKFCSSGTFQVKVKQVCYTSTSS*VVYISR
Trigger: CCGGGAGATGTACACCACCCATGAGGACGTGGAGGT...GTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGAACAAAACTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR CCA 90 bp TCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCTCCAGCCCCCAGCCTTaGATGGAAACATCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: SSGTFQVKVKQVCYIMFSSSPQP*METSKP
Trigger: TGGCTTTGATGTTTCCATCCAAGGCTGGGGGCTGGA...GCTGAACATTATGTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR TCA 90 bp TCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCATTTCTGGGCGGTCATaGCTCCCACGAAGAGAAAGT +
Preference number: 4 (lower is better)
Translates to: SSGTFQVKVKQVCYIMFSISGRS*LPRRES
Trigger: ACTTTCTCTTCGTGGGAGTCATGACCGCCCAGAAAT...GCTGAACATTATGTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR TCA 90 bp GTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCAAGAAGATGTGTTCAAAGCCTGGACAACCTTGTTaGAAAGGTCCACATCCTCCA +
Preference number: 4 (lower is better)
Translates to: VKVKQVCYIMFSKKMCSKPGQPC*KGPHPP
Trigger: TGGAGGATGTGGACCTTTTCAACAAGGTTGTCCAGG...CTTTGAACACATCTTCTTGCTGAACATTATGTAGCAGACCTGCTTAACTTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR GCA 90 bp GTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCAAGAAGATGTGTTCAAAGAGGACAATTTCGCGGTaGAGCTGTATTGTGCGATGG +
Preference number: 4 (lower is better)
Translates to: VKVKQVCYIMFSKKMCSKRTISR*SCIVRW
Trigger: CCATCGCACAATACAGCTGCACCGCGAAATTGTCCT...CTTTGAACACATCTTCTTGCTGAACATTATGTAGCAGACCTGCTTAACTTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR GCA 90 bp GTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCAAGAAGATGTGTTCAAAGTCTTTGGGTTCTTTGTaGTCACTCTTCGACCCAGGG +
Preference number: 4 (lower is better)
Translates to: VKVKQVCYIMFSKKMCSKSLGSL*SLFDPG
Trigger: CCCTGGGTCGAAGAGTGAGCACAAAGAACCCAAAGA...CTTTGAACACATCTTCTTGCTGAACATTATGTAGCAGACCTGCTTAACTTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR CCA 90 bp AAAAAGTTTTGTTCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACTCCAAGGCTTCCCTCTaGGCGGAGTCCATTCCTCTT +
Preference number: 4 (lower is better)
Translates to: KKFCSSGTFQVKVKQVCYSKASL*AESIPL
Trigger: AAGAGGAATGGACTCCGCCCAGAGGGAAGCCTTGGA...GTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGAACAAAACTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR CCA 90 bp GGTAGAATCTGTGGAATGTTAACAATCACAACAGAACATTTACCAGAGTTACAGACAGGATGGTGGACGTaGACTACTCCTACTTCCTGG +
Preference number: 4 (lower is better)
Translates to: GRICGMLTITTEHLPELQTGWWT*TTPTSW
Trigger: CCAGGAAGTAGGAGTAGTCCACGTCCACCATCCTGT...CTGTAACTCTGGTAAATGTTCTGTTGTGATTGTTAACATTCCACAGATTCTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR TCA 90 bp GTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCAAGAAGATGTGTTCAAAGGTCAGAACCCTCACTTaGGAAGAACTGAACTTTCCC +
Preference number: 4 (lower is better)
Translates to: VKVKQVCYIMFSKKMCSKVRTLT*EELNFP
Trigger: GGGAAAGTTCAGTTCTTCTCAAGTGAGGGTTCTGAC...CTTTGAACACATCTTCTTGCTGAACATTATGTAGCAGACCTGCTTAACTTTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR GCA 90 bp AAAAAGTTTTGTTCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACGAAAGAGGGGCTCGCTaGTGTTCAAACTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: KKFCSSGTFQVKVKQVCYERGAR*CSNSSG
Trigger: TCCTGAGGAGTTTGAACAGCAGCGAGCCCCTCTTTC...GTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGAACAAAACTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR GCA 90 bp AAAAAGTTTTGTTCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACGGAGCTCGGATATCTTaGGGCTCAGCATGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: KKFCSSGTFQVKVKQVCYGARIS*GSACSC
Trigger: ACAGCTACATGCTGAGCCGCAAGATATCCGAGCTCC...GTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGAACAAAACTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR CCA 90 bp AGGAGAGCCAACATTCTCATTAAGTCCTCGTTCTTCCTGTTAACTGTTTACATGGTCTTCAAACCTGCCTaGACAACCTTGTTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: RRANILIKSSFFLLTVYMVFKPA*TTLLKR
Trigger: CCTTTTCAACAAGGTTGTCCAGGCAGGTTTGAAGAC...CATGTAAACAGTTAACAGGAAGAACGAGGACTTAATGAGAATGTTGGCTCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR CCA 90 bp AAGTCCTCGTTCTTCCTGTTAACTGTTTACATGACTGTCCTTCAGCACGTACACACATTTTGTACTGTTTaGGGTCAAGATTGGGATCAC +
Preference number: 4 (lower is better)
Translates to: KSSFFLLTVYMTVLQHVHTFCTV*GQDWDH
Trigger: GTGATCCCAATCTTGACCCCAAACAGTACAAAATGT...GTGTACGTGCTGAAGGACAGTCATGTAAACAGTTAACAGGAAGAACGAGGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR CCA 90 bp GTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCAAGAAGATGTGTTCAAAGTGGCACTACTGGAATTaGTACAGATGTGTCAGAACC +
Preference number: 4 (lower is better)
Translates to: VKVKQVCYIMFSKKMCSKWHYWN*YRCVRT
Trigger: GGTTCTGACACATCTGTACCAATTCCAGTAGTGCCA...CTTTGAACACATCTTCTTGCTGAACATTATGTAGCAGACCTGCTTAACTTTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR CCA 90 bp AGGAGAGCCAACATTCTCATTAAGTCCTCGTTCTTCCTGTTAACTGTTTACATGACTACTCCTACTTCCTaGCTCCTAAACGTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: RRANILIKSSFFLLTVYMTTPTS*LLNVFK
Trigger: TTTGAAGACGTTTAGGAGCCAGGAAGTAGGAGTAGT...CATGTAAACAGTTAACAGGAAGAACGAGGACTTAATGAGAATGTTGGCTCTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR CCA 90 bp TCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCCATAGGTCGATGCTTTaGACCCCAAGCACATTTTGT +
Preference number: 4 (lower is better)
Translates to: SSGTFQVKVKQVCYIMFSHRSML*TPSTFC
Trigger: ACAAAATGTGCTTGGGGTCCAAAGCATCGACCTATG...GCTGAACATTATGTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR TCA 90 bp GGTAGAATCTGTGGAATGTTAACAATCACAACAGAACATTTACCAGAGTTACAGAAGGATCCAGATTCCTaGTTGATTCTCTTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: GRICGMLTITTEHLPELQKDPDS*LILLAN
Trigger: GTTGGCCAAGAGAATCAATCAGGAATCTGGATCCTT...CTGTAACTCTGGTAAATGTTCTGTTGTGATTGTTAACATTCCACAGATTCTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR TCA 90 bp TCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCTACCATGAGAGGAAATaGTCAACTCTGGAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: SSGTFQVKVKQVCYIMFSYHERK*STLESS
Trigger: AGAGCTTTCCAGAGTTGATCATTTCCTCTCATGGTA...GCTGAACATTATGTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR TCA 90 bp GGTAGAATCTGTGGAATGTTAACAATCACAACAGAACATTTACCAGAGTTACAGTACGCAGCCCTCCAATaGCGTGTATTAAAATGGCAA +
Preference number: 4 (lower is better)
Translates to: GRICGMLTITTEHLPELQYAALQ*RVLKWQ
Trigger: TTGCCATTTTAATACACGTCATTGGAGGGCTGCGTA...CTGTAACTCTGGTAAATGTTCTGTTGTGATTGTTAACATTCCACAGATTCTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR GCA 90 bp GGTAGAATCTGTGGAATGTTAACAATCACAACAGAACATTTACCAGAGTTACAGATCATCTCCATGACCTaGATGACAATGTCGTCCAAG +
Preference number: 4 (lower is better)
Translates to: GRICGMLTITTEHLPELQIISMT*MTMSSK
Trigger: CTTGGACGACATTGTCATGCAGGTCATGGAGATGAT...CTGTAACTCTGGTAAATGTTCTGTTGTGATTGTTAACATTCCACAGATTCTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR GCA 90 bp GTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCAAGAAGATGTGTTCAAAGAATGTTCACGTTTTCTaGCATAGGACTGGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: VKVKQVCYIMFSKKMCSKNVHVF*HRTGAK
Trigger: CTTTGCTCCAGTCCTATGGCAGAAAACGTGAACATT...CTTTGAACACATCTTCTTGCTGAACATTATGTAGCAGACCTGCTTAACTTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR CCA 90 bp GTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCAAGAAGATGTGTTCAAAGTCATGCTCCACAAACTaGATTTTGCTGAAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: VKVKQVCYIMFSKKMCSKSCSTN*ILLKVC
Trigger: GCAGACTTTCAGCAAAATCCAGTTTGTGGAGCATGA...CTTTGAACACATCTTCTTGCTGAACATTATGTAGCAGACCTGCTTAACTTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR CCA 90 bp TCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCACTACTCCTACTTCCTaGCTCCTAAACGTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: SSGTFQVKVKQVCYIMFSTTPTS*LLNVFK
Trigger: TTTGAAGACGTTTAGGAGCCAGGAAGTAGGAGTAGT...GCTGAACATTATGTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR CCA 90 bp AAAAAGTTTTGTTCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACCAAAAGACAGGATGGTaGACGTGGACTACTCCTACT +
Preference number: 4 (lower is better)
Translates to: KKFCSSGTFQVKVKQVCYQKTGW*TWTTPT
Trigger: AGTAGGAGTAGTCCACGTCCACCATCCTGTCTTTTG...GTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGAACAAAACTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR CCA 90 bp GTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCAAGAAGATGTGTTCAAAGGTTTGGGGTCAAGATTaGGATCACAAAAGACAGGAT +
Preference number: 4 (lower is better)
Translates to: VKVKQVCYIMFSKKMCSKVWGQD*DHKRQD
Trigger: ATCCTGTCTTTTGTGATCCCAATCTTGACCCCAAAC...CTTTGAACACATCTTCTTGCTGAACATTATGTAGCAGACCTGCTTAACTTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR CCA 90 bp TCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCGGAAATGATCAACTCTaGAAAGCTCTCCTGAAGACA +
Preference number: 4 (lower is better)
Translates to: SSGTFQVKVKQVCYIMFSGNDQL*KALLKT
Trigger: TGTCTTCAGGAGAGCTTTCCAGAGTTGATCATTTCC...GCTGAACATTATGTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR TCA 90 bp GTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCAAGAAGATGTGTTCAAAGCAAACTGGATTTTGCTaGAAGTCTGCTGTAAATACG +
Preference number: 4 (lower is better)
Translates to: VKVKQVCYIMFSKKMCSKQTGFC*KSAVNT
Trigger: CGTATTTACAGCAGACTTTCAGCAAAATCCAGTTTG...CTTTGAACACATCTTCTTGCTGAACATTATGTAGCAGACCTGCTTAACTTTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR TCA 90 bp AAAAAGTTTTGTTCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACAAGGATCCAGATTCCTaGTTGATTCTCTTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: KKFCSSGTFQVKVKQVCYKDPDS*LILLAN
Trigger: GTTGGCCAAGAGAATCAATCAGGAATCTGGATCCTT...GTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGAACAAAACTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR TCA 90 bp GTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCAAGAAGATGTGTTCAAAGCCTTATAAATACACGTaGTGCCAAACCCATAGTTTC +
Preference number: 4 (lower is better)
Translates to: VKVKQVCYIMFSKKMCSKPYKYT*CQTHSF
Trigger: GAAACTATGGGTTTGGCATCACGTGTATTTATAAGG...CTTTGAACACATCTTCTTGCTGAACATTATGTAGCAGACCTGCTTAACTTTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR TCA 90 bp TCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCCCTTATAAATACACGTaGTGCCAAACCCATAGTTTC +
Preference number: 4 (lower is better)
Translates to: SSGTFQVKVKQVCYIMFSPYKYT*CQTHSF
Trigger: GAAACTATGGGTTTGGCATCACGTGTATTTATAAGG...GCTGAACATTATGTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR GCA 90 bp GGTAGAATCTGTGGAATGTTAACAATCACAACAGAACATTTACCAGAGTTACAGAAACGTCTTCAAACCTaGCTGGACAACCTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: GRICGMLTITTEHLPELQKRLQT*LDNLVE
Trigger: TTCAACAAGGTTGTCCAGGCAGGTTTGAAGACGTTT...CTGTAACTCTGGTAAATGTTCTGTTGTGATTGTTAACATTCCACAGATTCTACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR CCA 90 bp AAAAAGTTTTGTTCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACGTCTTCAAACCTGCCTaGACAACCTTGTTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: KKFCSSGTFQVKVKQVCYVFKPA*TTLLKR
Trigger: CCTTTTCAACAAGGTTGTCCAGGCAGGTTTGAAGAC...GTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGAACAAAACTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR CCA 90 bp GGTAGAATCTGTGGAATGTTAACAATCACAACAGAACATTTACCAGAGTTACAGACATTTTGTACTGTTTaGGGTCAAGATTGGGATCAC +
Preference number: 4 (lower is better)
Translates to: GRICGMLTITTEHLPELQTFCTV*GQDWDH
Trigger: GTGATCCCAATCTTGACCCCAAACAGTACAAAATGT...CTGTAACTCTGGTAAATGTTCTGTTGTGATTGTTAACATTCCACAGATTCTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR CCA 90 bp GGTAGAATCTGTGGAATGTTAACAATCACAACAGAACATTTACCAGAGTTACAGCAAAATGGTTGTCACTaGGAACTTTCCCACTATAAA +
Preference number: 4 (lower is better)
Translates to: GRICGMLTITTEHLPELQQNGCH*ELSHYK
Trigger: TTTATAGTGGGAAAGTTCCCAGTGACAACCATTTTG...CTGTAACTCTGGTAAATGTTCTGTTGTGATTGTTAACATTCCACAGATTCTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS GCA 90 bp GGCGACGACGGCGGCGGCAGACGAGTCCGGGCTCCCGTCCCGCCCTaGCCGCGTCCTCCGGCTGGCTGGGCTCGGTTCGCACGGCGCCTG +
Preference number: 5 (lower is better)
Translates to: GDDGGGRRVRAPVPP*PRPPAGWARFARRL
Trigger: CAGGCGCCGTGCGAACCGAGCCCAGCCAGCCGGAGGACGCGGGCAGGGCGGGACGGGAGCCCGGACTCGTCTGCCGCCGCCGTCGTCGCC
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS CCA 90 bp CAGACGAGTCCGGGCTCCCGTCCCGCCCTGCCCGCGTCCTCCGGCTaGCTGGGCTCGGTTCGCACGGCGCCTGTCCCCGTCCTCTTCGTA +
Preference number: 5 (lower is better)
Translates to: QTSPGSRPALPASSG*LGSVRTAPVPVLFV
Trigger: TACGAAGAGGACGGGGACAGGCGCCGTGCGAACCGAGCCCAGCCAGCCGGAGGACGCGGGCAGGGCGGGACGGGAGCCCGGACTCGTCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS TCA 90 bp TGTAGGCGGCCACGGCCCGAGTCTGCAGGTATTTCTGGGCGGTCATaGCTCCCACGAAGAGAAAGTTCCTGTCGCGCGGGCCGCCATCTG +
Preference number: 5 (lower is better)
Translates to: CRRPRPESAGISGRS*LPRRESSCRAGRHL
Trigger: CAGATGGCGGCCCGCGCGACAGGAACTTTCTCTTCGTGGGAGTCATGACCGCCCAGAAATACCTGCAGACTCGGGCCGTGGCCGCCTACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS CCA 90 bp ACCCCTGCAAACCTCCGGACACACCTTCCCACCTCCACGTCCTCATaGGTGGTGTACATCTCCCGGAGACACTTGCCAATGTGCGGCACC +
Preference number: 5 (lower is better)
Translates to: TPANLRTHLPTSTSS*VVYISRRHLPMCGT
Trigger: GGTGCCGCACATTGGCAAGTGTCTCCGGGAGATGTACACCACCCATGAGGACGTGGAGGTGGGAAGGTGTGTCCGGAGGTTTGCAGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR CAA 90 bp AGGCTTCCCTCTGGGCGGAGTCCATTCCTCTTCGAGGGGGCTGGCCGTCAACTGATGCGCCCTCTGGTCTaGGCGTTGGCATTGATCATC +
Preference number: 5 (lower is better)
Translates to: RLPSGRSPFLFEGAGRQLMRPLV*ALALII
Trigger: GATGATCAATGCCAACGCCAAGACCAGAGGGCGCAT...CAGTTGACGGCCAGCCCCCTCGAAGAGGAATGGACTCCGCCCAGAGGGAAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS GCA 90 bp ACGTCCTCATGGGTGGTGTACATCTCCCGGAGACACTTGCCAATGTaGGGCACCATTCTCCGAAGCACCTCCCGGCTCATGATCACGCCA +
Preference number: 5 (lower is better)
Translates to: TSSWVVYISRRHLPM*GTILRSTSRLMITP
Trigger: TGGCGTGATCATGAGCCGGGAGGTGCTTCGGAGAATGGTGCCGCACATTGGCAAGTGTCTCCGGGAGATGTACACCACCCATGAGGACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR CAA 90 bp TCTTCGACCCAGGGAGCTGAAAGGGGACGAGCTTCTTCAGGGAGTTTGAGAGAACGCGGTGCAGCTGTATaGTGCGATGGCGGAGCTCGG +
Preference number: 5 (lower is better)
Translates to: SSTQGAERGRASSGSLRERGAAV*CDGGAR
Trigger: CCGAGCTCCGCCATCGCACAATACAGCTGCACCGCG...TTCTCTCAAACTCCCTGAAGAAGCTCGTCCCCTTTCAGCTCCCTGGGTCGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR CAA 90 bp CGGAGTCCATTCCTCTTCGAGGGGGCTGGCCGTCAACTGCCGAATACAAGTATTCTCCAGCCCCCAGCCTaGGATGGAAACATCAAAGCC +
Preference number: 5 (lower is better)
Translates to: RSPFLFEGAGRQLPNTSILQPPA*DGNIKA
Trigger: GGCTTTGATGTTTCCATCCAAGGCTGGGGGCTGGAG...AATACTTGTATTCGGCAGTTGACGGCCAGCCCCCTCGAAGAGGAATGGACTCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR CAA 90 bp TGCGATGGCGGAGCTCGGATATCTTGCGGCTCAGCATGTAGCTGTGGAGCCTGTGCCTGGACAACCTTGTaGAAAAGGTCCACATCCTCC +
Preference number: 5 (lower is better)
Translates to: CDGGARISCGSACSCGACAWTTL*KRSTSS
Trigger: GGAGGATGTGGACCTTTTCAACAAGGTTGTCCAGGC...ACAGGCTCCACAGCTACATGCTGAGCCGCAAGATATCCGAGCTCCGCCATCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR CAA 90 bp CTCTGGGCGGAGTCCATTCCTCTTCGAGGGGGCTGGCCGTCAACTGCCGAATACGACCCCAAGCACATTTaGTACTGTTTGGGGTCAAGA +
Preference number: 5 (lower is better)
Translates to: LWAESIPLRGGWPSTAEYDPKHI*YCLGSR
Trigger: TCTTGACCCCAAACAGTACAAAATGTGCTTGGGGTC...GTATTCGGCAGTTGACGGCCAGCCCCCTCGAAGAGGAATGGACTCCGCCCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR CAA 90 bp CTACCACGAGAACAGCCACATACCTCACTGTGCCTTCTTCACGCCCCTTGCTTTCTCCAGCCCCCAGCCTaGGATGGAAACATCAAAGCC +
Preference number: 5 (lower is better)
Translates to: LPREQPHTSLCLLHAPCFLQPPA*DGNIKA
Trigger: GGCTTTGATGTTTCCATCCAAGGCTGGGGGCTGGAG...AAAGCAAGGGGCGTGAAGAAGGCACAGTGAGGTATGTGGCTGTTCTCGTGGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR CAA 90 bp TGCCTTCTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGCCTGCCTGGACAACCTaGTTGAAAAGGTCCACATCC +
Preference number: 5 (lower is better)
Translates to: CLLHAPCFKTYVASWACMPAWTT*LKRSTS
Trigger: GGATGTGGACCTTTTCAACAAGGTTGTCCAGGCAGG...CATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAGAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR CAA 90 bp TGCCTGGACAACCTTGTTGAAAAGGTCCACATCCTCCAGCCCCCAGCCTTGGATCCTGCCTGGACAACCTaGTTGAAAAGGTCCACATCC +
Preference number: 5 (lower is better)
Translates to: CLDNLVEKVHILQPPALDPAWTT*LKRSTS
Trigger: GGATGTGGACCTTTTCAACAAGGTTGTCCAGGCAGG...ATCCAAGGCTGGGGGCTGGAGGATGTGGACCTTTTCAACAAGGTTGTCCAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR CAA 90 bp CTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGGTGAAAAGGCAGGGGAATTGCTaGAACCAGGGAAGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: LHAPCFKTYVASWACMVKRQGNC*NQGSGG
Trigger: ACCTCCACTTCCCTGGTTCAAGCAATTCCCCTGCCT...TTTCACCATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS GCA 90 bp GTCCTTCAGCACGTACACGGTTCAGCCTCAGCTACAGACCATCACTaGTACAGAGCGACAACTTCCCATTCGGACTTAGGCAGCGTTTCA +
Preference number: 5 (lower is better)
Translates to: VLQHVHGSASATDHH*YRATTSHSDLGSVS
Trigger: TGAAACGCTGCCTAAGTCCGAATGGGAAGTTGTCGCTCTGTAGCAGTGATGGTCTGTAGCTGAGGCTGAACCGTGTACGTGCTGAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543813.2
ENST00000561143.1
CDS-3UTR CAA 90 bp CTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGGTGAAAGCCTGGACAACCTTGTaGAAAAGGTCCACATCCTCC +
Preference number: 5 (lower is better)
Translates to: LHAPCFKTYVASWACMVKAWTTL*KRSTSS
Trigger: GGAGGATGTGGACCTTTTCAACAAGGTTGTCCAGGC...TTTCACCATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR CAA 90 bp TGCCTTCTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGGTGGCACTACTGGAATaGGTACAGATGTGTCAGAAC +
Preference number: 5 (lower is better)
Translates to: CLLHAPCFKTYVASWACMVALLE*VQMCQN
Trigger: GTTCTGACACATCTGTACCAATTCCAGTAGTGCCAC...CATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAGAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR CAA 90 bp TGCCTTCTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGTGTCAGAACCCTCACTaGAGAAGAACTGAACTTTCC +
Preference number: 5 (lower is better)
Translates to: CLLHAPCFKTYVASWACMCQNPH*RRTELS
Trigger: GGAAAGTTCAGTTCTTCTCAAGTGAGGGTTCTGACA...CATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAGAAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR CAA 90 bp TCTTCGACCCAGGGAGCTGAAAGGGGACGAGCTTCTTCAGGGAGTTTGAGAGAATTCCCTTTGTGCTTTTaGTACAGAAGCAGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: SSTQGAERGRASSGSLREFPLCF*YRSSRS
Trigger: GGACCTGCTGCTTCTGTACAAAAAGCACAAAGGGAA...TTCTCTCAAACTCCCTGAAGAAGCTCGTCCCCTTTCAGCTCCCTGGGTCGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR CAA 90 bp CTTCACGCCCCTTGCTTTAAAACCTACGTGGCCAGCTGGGCTTGCATGGTGAAAGACCCCAAGCACATTTaGTACTGTTTGGGGTCAAGA +
Preference number: 5 (lower is better)
Translates to: LHAPCFKTYVASWACMVKDPKHI*YCLGSR
Trigger: TCTTGACCCCAAACAGTACAAAATGTGCTTGGGGTC...TTTCACCATGCAAGCCCAGCTGGCCACGTAGGTTTTAAAGCAAGGGGCGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR CAA 90 bp TCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCCGGCTTAGCTCGCCATaGCAACAGGAGCCCCTCACG +
Preference number: 5 (lower is better)
Translates to: SSGTFQVKVKQVCYIMFSRLSSP*QQEPLT
Trigger: CGTGAGGGGCTCCTGTTGCAATGGCGAGCTAAGCCG...GCTGAACATTATGTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR CAA 90 bp CTACCACGAGAACAGCCACATACCTCACTGTGCCTTCTTCACGCCCCTTGCTTTCACATTTTGTACTGTTaGGGGTCAAGATTGGGATCA +
Preference number: 5 (lower is better)
Translates to: LPREQPHTSLCLLHAPCFHILYC*GSRLGS
Trigger: TGATCCCAATCTTGACCCCAAACAGTACAAAATGTG...AAAGCAAGGGGCGTGAAGAAGGCACAGTGAGGTATGTGGCTGTTCTCGTGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR CAA 90 bp CGGAGTCCATTCCTCTTCGAGGGGGCTGGCCGTCAACTGCCGAATACAAGTATTACACTGATCACCTTCTaGTTCAGAAAGCTCAATCTT +
Preference number: 5 (lower is better)
Translates to: RSPFLFEGAGRQLPNTSITLITF*FRKLNL
Trigger: AAGATTGAGCTTTCTGAACAAGAAGGTGATCAGTGT...AATACTTGTATTCGGCAGTTGACGGCCAGCCCCCTCGAAGAGGAATGGACTCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR CAA 90 bp AAAAAGTTTTGTTCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACCGCGGTGCAGCTGTATaGTGCGATGGCGGAGCTCGG +
Preference number: 5 (lower is better)
Translates to: KKFCSSGTFQVKVKQVCYRGAAV*CDGGAR
Trigger: CCGAGCTCCGCCATCGCACAATACAGCTGCACCGCG...GTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGAACAAAACTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR CAA 90 bp AAGTCCTCGTTCTTCCTGTTAACTGTTTACATGACTGTCCTTCAGCACGTACACTCTCTTGGCCAACTCTaGTGCATCCAGCTCCTCATG +
Preference number: 5 (lower is better)
Translates to: KSSFFLLTVYMTVLQHVHSLGQL*CIQLLM
Trigger: CATGAGGAGCTGGATGCACAAGAGTTGGCCAAGAGA...GTGTACGTGCTGAAGGACAGTCATGTAAACAGTTAACAGGAAGAACGAGGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR CAA 90 bp TCAAGATTGGGATCACAAAAGACAGGATGGTGGACGTGGACTACTCCTACTTCCTGTTTGGGGTCAAGATaGGGATCACAAAAGACAGGA +
Preference number: 5 (lower is better)
Translates to: SRLGSQKTGWWTWTTPTSCLGSR*GSQKTG
Trigger: TCCTGTCTTTTGTGATCCCAATCTTGACCCCAAACA...GGAAGTAGGAGTAGTCCACGTCCACCATCCTGTCTTTTGTGATCCCAATCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR CAA 90 bp TCAAGATTGGGATCACAAAAGACAGGATGGTGGACGTGGACTACTCCTACTTCCTCTGTGTTGCTGTATTaGCTCATCAGGACAATTTCG +
Preference number: 5 (lower is better)
Translates to: SRLGSQKTGWWTWTTPTSSVLLY*LIRTIS
Trigger: CGAAATTGTCCTGATGAGCAAATACAGCAACACAGA...GGAAGTAGGAGTAGTCCACGTCCACCATCCTGTCTTTTGTGATCCCAATCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR CAA 90 bp TCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCATGCGCCCTCTGGTCTaGGCGTTGGCATTGATCATC +
Preference number: 5 (lower is better)
Translates to: SSGTFQVKVKQVCYIMFSMRPLV*ALALII
Trigger: GATGATCAATGCCAACGCCAAGACCAGAGGGCGCAT...GCTGAACATTATGTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR CAA 90 bp TCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCTCTCTTGGCCAACTCTaGTGCATCCAGCTCCTCATG +
Preference number: 5 (lower is better)
Translates to: SSGTFQVKVKQVCYIMFSSLGQL*CIQLLM
Trigger: CATGAGGAGCTGGATGCACAAGAGTTGGCCAAGAGA...GCTGAACATTATGTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR CAA 90 bp AAGTCCTCGTTCTTCCTGTTAACTGTTTACATGACTGTCCTTCAGCACGTACACGTAAAGGCAAAATGGTaGTCACTGGGAACTTTCCCA +
Preference number: 5 (lower is better)
Translates to: KSSFFLLTVYMTVLQHVHVKAKW*SLGTFP
Trigger: TGGGAAAGTTCCCAGTGACAACCATTTTGCCTTTAC...GTGTACGTGCTGAAGGACAGTCATGTAAACAGTTAACAGGAAGAACGAGGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR CAA 90 bp TCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCCCGTACTGGATCTCTTaGAAGTCAATGATGCGCCCT +
Preference number: 5 (lower is better)
Translates to: SSGTFQVKVKQVCYIMFSPYWIS*KSMMRP
Trigger: AGGGCGCATCATTGACTTCAAAGAGATCCAGTACGG...GCTGAACATTATGTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR CAA 90 bp GTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCAAGAAGATGTGTTCAAAGCCGTACTGGATCTCTTaGAAGTCAATGATGCGCCCT +
Preference number: 5 (lower is better)
Translates to: VKVKQVCYIMFSKKMCSKPYWIS*KSMMRP
Trigger: AGGGCGCATCATTGACTTCAAAGAGATCCAGTACGG...CTTTGAACACATCTTCTTGCTGAACATTATGTAGCAGACCTGCTTAACTTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR CAA 90 bp TCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCTTCCCTTTGTGCTTTTaGTACAGAAGCAGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: SSGTFQVKVKQVCYIMFSFPLCF*YRSSRS
Trigger: GGACCTGCTGCTTCTGTACAAAAAGCACAAAGGGAA...GCTGAACATTATGTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR CAA 90 bp AGGAGAGCCAACATTCTCATTAAGTCCTCGTTCTTCCTGTTAACTGTTTACATGTTATCTTTGGGTTCTTaGTGCTCACTCTTCGACCCA +
Preference number: 5 (lower is better)
Translates to: RRANILIKSSFFLLTVYMLSLGS*CSLFDP
Trigger: TGGGTCGAAGAGTGAGCACAAAGAACCCAAAGATAA...CATGTAAACAGTTAACAGGAAGAACGAGGACTTAATGAGAATGTTGGCTCTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543813.2
CDS-3UTR CAA 90 bp GTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCAAGAAGATGTGTTCAAAGGAACTTTCCCAGGAATaGTCTTGGACCATGTTCTGT +
Preference number: 5 (lower is better)
Translates to: VKVKQVCYIMFSKKMCSKELSQE*SWTMFC
Trigger: ACAGAACATGGTCCAAGACAATTCCTGGGAAAGTTC...CTTTGAACACATCTTCTTGCTGAACATTATGTAGCAGACCTGCTTAACTTTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR CAA 90 bp GTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCAAGAAGATGTGTTCAAAGTTATCTTTGGGTTCTTaGTGCTCACTCTTCGACCCA +
Preference number: 5 (lower is better)
Translates to: VKVKQVCYIMFSKKMCSKLSLGS*CSLFDP
Trigger: TGGGTCGAAGAGTGAGCACAAAGAACCCAAAGATAA...CTTTGAACACATCTTCTTGCTGAACATTATGTAGCAGACCTGCTTAACTTTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR CAA 90 bp TCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCTGTTTGGGGTCAAGATaGGGATCACAAAAGACAGGA +
Preference number: 5 (lower is better)
Translates to: SSGTFQVKVKQVCYIMFSCLGSR*GSQKTG
Trigger: TCCTGTCTTTTGTGATCCCAATCTTGACCCCAAACA...GCTGAACATTATGTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR CAA 90 bp AAAAAGTTTTGTTCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACTCCAGACGGTCTCCTTaGATGTACACGTCATCATCT +
Preference number: 5 (lower is better)
Translates to: KKFCSSGTFQVKVKQVCYSRRSP*MYTSSS
Trigger: AGATGATGACGTGTACATCAAAGGAGACCGTCTGGA...GTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGAACAAAACTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS-3UTR CAA 90 bp TCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCCACATTTTGTACTGTTaGGGGTCAAGATTGGGATCA +
Preference number: 5 (lower is better)
Translates to: SSGTFQVKVKQVCYIMFSHILYC*GSRLGS
Trigger: TGATCCCAATCTTGACCCCAAACAGTACAAAATGTG...GCTGAACATTATGTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR CAA 90 bp AAAAAGTTTTGTTCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACGTAAAGGCAAAATGGTaGTCACTGGGAACTTTCCCA +
Preference number: 5 (lower is better)
Translates to: KKFCSSGTFQVKVKQVCYVKAKW*SLGTFP
Trigger: TGGGAAAGTTCCCAGTGACAACCATTTTGCCTTTAC...GTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGAACAAAACTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR CAA 90 bp TCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACATAATGTTCAGCACACTGATCACCTTCTaGTTCAGAAAGCTCAATCTT +
Preference number: 5 (lower is better)
Translates to: SSGTFQVKVKQVCYIMFSTLITF*FRKLNL
Trigger: AAGATTGAGCTTTCTGAACAAGAAGGTGATCAGTGT...GCTGAACATTATGTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR CAA 90 bp AAAAAGTTTTGTTCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACTCTGTGTTGCTGTATTaGCTCATCAGGACAATTTCG +
Preference number: 5 (lower is better)
Translates to: KKFCSSGTFQVKVKQVCYSVLLY*LIRTIS
Trigger: CGAAATTGTCCTGATGAGCAAATACAGCAACACAGA...GTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGAACAAAACTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254190.4
ENST00000543813.2
CDS-3UTR CAA 90 bp AAAAAGTTTTGTTCATCAGGTACATTTCAAGTCAAAGTTAAGCAGGTCTGCTACTTTTTCCCCAACGTTTaGATTAGGGTGTATGTGTGT +
Preference number: 5 (lower is better)
Translates to: KKFCSSGTFQVKVKQVCYFFPNV*IRVYVC
Trigger: ACACACATACACCCTAATCAAAACGTTGGGGAAAAA...GTAGCAGACCTGCTTAACTTTGACTTGAAATGTACCTGATGAACAAAACTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS TCA 72 bp CCAGCACGAAGCCCAGGACGAGCCCGAGCAGCACGCTaGGCCAGGCGCGCCGGCCGCGCGCGGCCATGCCCG +
Preference number: 6 (lower is better)
Translates to: PARSPGRARAAR*ARRAGRARPCP
Trigger: CGGGCATGGCCGCGCGCGGCCGGCGCGCCTGGCTCAGCGTGCTGCTCGGGCTCGTCCTGGGCTTCGTGCTGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS GCA 72 bp GGCGGCGGCAGACGAGTCCGGGCTCCCGTCCCGCCCTaGCCGCGTCCTCCGGCTGGCTGGGCTCGGTTCGCA +
Preference number: 6 (lower is better)
Translates to: GGGRRVRAPVPP*PRPPAGWARFA
Trigger: TGCGAACCGAGCCCAGCCAGCCGGAGGACGCGGGCAGGGCGGGACGGGAGCCCGGACTCGTCTGCCGCCGCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS CCA 72 bp CACGAAGAGAAAGTTCCTGTCGCGCGGGCCGCCATCTaGGTCCGAGCCGGGCGGCCAGAGCTGCGCCCCGCG +
Preference number: 6 (lower is better)
Translates to: HEEKVPVARAAI*VRAGRPELRPA
Trigger: CGCGGGGCGCAGCTCTGGCCGCCCGGCTCGGACCCAGATGGCGGCCCGCGCGACAGGAACTTTCTCTTCGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS GCA 72 bp CCCCGTCCTCTTCGTAGCCGGCGCCGCCGCCGCAGCTaGACATCCTCCGGCTTAGCTCGCCATTGCAACAGG +
Preference number: 6 (lower is better)
Translates to: PRPLRSRRRRRS*TSSGLARHCNR
Trigger: CCTGTTGCAATGGCGAGCTAAGCCGGAGGATGTGCAGCTGCGGCGGCGGCGCCGGCTACGAAGAGGACGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS CAA 72 bp CCGCCGCAGCTGCACATCCTCCGGCTTAGCTCGCCATaGCAACAGGAGCCCCTCACGTCACGCACGGCGCGT +
Preference number: 6 (lower is better)
Translates to: PPQLHILRLSSP*QQEPLTSRTAR
Trigger: ACGCGCCGTGCGTGACGTGAGGGGCTCCTGTTGCAATGGCGAGCTAAGCCGGAGGATGTGCAGCTGCGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS GCA 72 bp CGCCGCAGCTGCACATCCTCCGGCTTAGCTCGCCATTaGAACAGGAGCCCCTCACGTCACGCACGGCGCGTT +
Preference number: 6 (lower is better)
Translates to: RRSCTSSGLARH*NRSPSRHARRV
Trigger: AACGCGCCGTGCGTGACGTGAGGGGCTCCTGTTGCAATGGCGAGCTAAGCCGGAGGATGTGCAGCTGCGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS TCA 72 bp CCACGGCCCGAGTCTGCAGGTATTTCTGGGCGGTCATaGCTCCCACGAAGAGAAAGTTCCTGTCGCGCGGGC +
Preference number: 6 (lower is better)
Translates to: PRPESAGISGRS*LPRRESSCRAG
Trigger: GCCCGCGCGACAGGAACTTTCTCTTCGTGGGAGTCATGACCGCCCAGAAATACCTGCAGACTCGGGCCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS CAA 90 bp CCCACCTCCACGTCCTCATGGGTGGTGTACATCTCCCGGAGACACTaGCCAATGTGCGGCACCATTCTCCGAAGCACCTCCCGGCTCATG +
Preference number: 6 (lower is better)
Translates to: PTSTSSWVVYISRRH*PMCGTILRSTSRLM
Trigger: CATGAGCCGGGAGGTGCTTCGGAGAATGGTGCCGCACATTGGCAAGTGTCTCCGGGAGATGTACACCACCCATGAGGACGTGGAGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS GCA 72 bp TGGGTGGTGTACATCTCCCGGAGACACTTGCCAATGTaGGGCACCATTCTCCGAAGCACCTCCCGGCTCATG +
Preference number: 6 (lower is better)
Translates to: WVVYISRRHLPM*GTILRSTSRLM
Trigger: CATGAGCCGGGAGGTGCTTCGGAGAATGGTGCCGCACATTGGCAAGTGTCTCCGGGAGATGTACACCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS CCA 72 bp TCCGGACACACCTTCCCACCTCCACGTCCTCATGGGTaGTGTACATCTCCCGGAGACACTTGCCAATGTGCG +
Preference number: 6 (lower is better)
Translates to: SGHTFPPPRPHG*CTSPGDTCQCA
Trigger: CGCACATTGGCAAGTGTCTCCGGGAGATGTACACCACCCATGAGGACGTGGAGGTGGGAAGGTGTGTCCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS CAA 72 bp ACGTCCTCATGGGTGGTGTACATCTCCCGGAGACACTaGCCAATGTGCGGCACCATTCTCCGAAGCACCTCC +
Preference number: 6 (lower is better)
Translates to: TSSWVVYISRRH*PMCGTILRSTS
Trigger: GGAGGTGCTTCGGAGAATGGTGCCGCACATTGGCAAGTGTCTCCGGGAGATGTACACCACCCATGAGGACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS GCA 72 bp AGTTTTCCCATTTCTTCCGTGGTGCCCAGGCCTGTCTaGCCAAGAAAGAGGGGCTCGCTGCTGTTCAAACTC +
Preference number: 6 (lower is better)
Translates to: SFPISSVVPRPV*PRKRGSLLFKL
Trigger: GAGTTTGAACAGCAGCGAGCCCCTCTTTCTTGGGCAGACAGGCCTGGGCACCACGGAAGAAATGGGAAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS GCA 72 bp CACGTACACGGTTCAGCCTCAGCTACAGACCATCACTaGTACAGAGCGACAACTTCCCATTCGGACTTAGGC +
Preference number: 6 (lower is better)
Translates to: HVHGSASATDHH*YRATTSHSDLG
Trigger: GCCTAAGTCCGAATGGGAAGTTGTCGCTCTGTAGCAGTGATGGTCTGTAGCTGAGGCTGAACCGTGTACGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543813.2
ENST00000561143.1
CDS CAA 72 bp AACCCTCACTTGAGAAGAACTGAACTTTCCCAGGAATaGTCTTGGACCATGTTCTGTAGGCGGCCACGGCCC +
Preference number: 6 (lower is better)
Translates to: NPHLRRTELSQE*SWTMFCRRPRP
Trigger: GGGCCGTGGCCGCCTACAGAACATGGTCCAAGACAATTCCTGGGAAAGTTCAGTTCTTCTCAAGTGAGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS CAA 72 bp AGGAGTCGTCCACACCCCGTAGTGGCACTACTGGAATaGGTACAGATGTGTCAGAACCCTCACTTGAGAAGA +
Preference number: 6 (lower is better)
Translates to: RSRPHPVVALLE*VQMCQNPHLRR
Trigger: TCTTCTCAAGTGAGGGTTCTGACACATCTGTACCAATTCCAGTAGTGCCACTACGGGGTGTGGACGACTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS TCA 72 bp CAGGAATTGTCTTGGACCATGTTAGGAAGTACAGTGTaGTGGAGCAGCAGTCCAAGTTCATCCTCCAAGAGA +
Preference number: 6 (lower is better)
Translates to: QELSWTMLGSTV*WSSSPSSSSKR
Trigger: TCTCTTGGAGGATGAACTTGGACTGCTGCTCCATCACACTGTACTTCCTAACATGGTCCAAGACAATTCCTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559384.1
CDS CAA 90 bp TCGCTGCTGTTCAAACTCCTCAGGAAGTTCTCCAGACGGTCTCCTTaGATGTACACGTCATCATCTGCTCTCATAAACCATTCATACTTG +
Preference number: 6 (lower is better)
Translates to: SLLFKLLRKFSRRSP*MYTSSSALINHSYL
Trigger: CAAGTATGAATGGTTTATGAGAGCAGATGATGACGTGTACATCAAAGGAGACCGTCTGGAGAACTTCCTGAGGAGTTTGAACAGCAGCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS TCA 72 bp GGTACAGATGTGTCAGAACCCTCACTTGAGAAGAACTaGACTTTCCCAGGAATTGTCTTGGACCATGTTAGG +
Preference number: 6 (lower is better)
Translates to: GTDVSEPSLEKN*TFPGIVLDHVR
Trigger: CCTAACATGGTCCAAGACAATTCCTGGGAAAGTTCAGTTCTTCTCAAGTGAGGGTTCTGACACATCTGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559384.1
CDS CAA 72 bp TTCAAACTCCTCAGGAAGTTCTCCAGACGGTCTCCTTaGATGTACACGTCATCATCTGCTCTCATAAACCAT +
Preference number: 6 (lower is better)
Translates to: FKLLRKFSRRSP*MYTSSSALINH
Trigger: ATGGTTTATGAGAGCAGATGATGACGTGTACATCAAAGGAGACCGTCTGGAGAACTTCCTGAGGAGTTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254190.4
CDS TCA 72 bp TACTGGAATTGGTACAGATGTGTCAGAACCCTCACTTaGGAAGAACTGAACTTTCCCAGGAATTGTCTTGGA +
Preference number: 6 (lower is better)
Translates to: YWNWYRCVRTLT*EELNFPRNCLG
Trigger: TCCAAGACAATTCCTGGGAAAGTTCAGTTCTTCTCAAGTGAGGGTTCTGACACATCTGTACCAATTCCAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254190.4