Pregenerated sensors for CHST5 (Homo sapiens)
Ensembl gene IDs: ENSG00000135702Ensembl transcript IDs: ENST00000336257.7, ENST00000336257.8, ENST00000565039.1
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR-3UTR CCA 90 bp | CTTACTGCAACCTCCACCTCTGGAGTCCAAGTGATTCTCCCACCTCAGCCTCCTGTCGCCTCCTGGGCCTaGCGACCACAGTTCGGGGCC | + |
Preference number: 2 (lower is better) Translates to: LTATSTSGVQVILPPQPPVASWA*RPQFGA Trigger: GGCCCCGAACTGTGGTCGCCAGGCCCAGGAGGCGAC...AGGAGGCTGAGGTGGGAGAATCACTTGGACTCCAGAGGTGGAGGTTGCAGTAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336257.7 |
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3UTR-3UTR TCA 90 bp | CTTACTGCAACCTCCACCTCTGGAGTCCAAGTGATTCTCCCACCTCAGCCTCCTCTGGTTTCGAACTCCTaGCCTCAGGTGATCCACCCG | + |
Preference number: 2 (lower is better) Translates to: LTATSTSGVQVILPPQPPLVSNS*PQVIHP Trigger: CGGGTGGATCACCTGAGGTCAGGAGTTCGAAACCAG...AGGAGGCTGAGGTGGGAGAATCACTTGGACTCCAGAGGTGGAGGTTGCAGTAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336257.7 |
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3UTR-3UTR CCA 90 bp | CTTACTGCAACCTCCACCTCTGGAGTCCAAGTGATTCTCCCACCTCAGCCTCCTCCACCGCACCCGGCCTaGCACACATTTAATTTAATT | + |
Preference number: 2 (lower is better) Translates to: LTATSTSGVQVILPPQPPPPHPA*HTFNLI Trigger: AATTAAATTAAATGTGTGCCAGGCCGGGTGCGGTGG...AGGAGGCTGAGGTGGGAGAATCACTTGGACTCCAGAGGTGGAGGTTGCAGTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336257.7 |
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3UTR GCA 72 bp | CCCAAGCTAGGGTGCAGTGGCATGATCTCAGCTTACTaGAACCTCCACCTCTGGAGTCCAAGTGATTCTCCC | + |
Preference number: 3 (lower is better) Translates to: PKLGCSGMISAY*NLHLWSPSDSP Trigger: GGGAGAATCACTTGGACTCCAGAGGTGGAGGTTGCAGTAAGCTGAGATCATGCCACTGCACCCTAGCTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336257.7 |
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CDS GCA 90 bp | GGACCCGGGCCCTCATGCCCATCCCATGCCCCAATTACTGCCCAGTaGCCTCAGGGATCAGCCCTCAGATTCGGCTACCCTACCCATTGG | + |
Preference number: 5 (lower is better) Translates to: GPGPSCPSHAPITAQ*PQGSALRFGYPTHW Trigger: CCAATGGGTAGGGTAGCCGAATCTGAGGGCTGATCCCTGAGGGCACTGGGCAGTAATTGGGGCATGGGATGGGCATGAGGGCCCGGGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336257.8 |
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CDS GCA 90 bp | ACTTTAGGGACCCGGGCCCTCATGCCCATCCCATGCCCCAATTACTaGCCAGTGCCCTCAGGGATCAGCCCTCAGATTCGGCTACCCTAC | + |
Preference number: 5 (lower is better) Translates to: TLGTRALMPIPCPNY*PVPSGISPQIRLPY Trigger: GTAGGGTAGCCGAATCTGAGGGCTGATCCCTGAGGGCACTGGGCAGTAATTGGGGCATGGGATGGGCATGAGGGCCCGGGTCCCTAAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336257.8 |
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CDS CCA 90 bp | CAGTGCCCTCAGGGATCAGCCCTCAGATTCGGCTACCCTACCCATTaGACTTCCCAAGACTCCCAAGGTCTCAGTCGAGCACTTTCCCAG | + |
Preference number: 5 (lower is better) Translates to: QCPQGSALRFGYPTH*TSQDSQGLSRALSQ Trigger: CTGGGAAAGTGCTCGACTGAGACCTTGGGAGTCTTGGGAAGTCCAATGGGTAGGGTAGCCGAATCTGAGGGCTGATCCCTGAGGGCACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336257.8 |
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CDS GCA 90 bp | GGATGTCAGAGCACCACCAGGCTCGCCGAGGTTGAATCCTGGCTCTaGCACTTCCTAGCCTATGATCTTGCTTATGAAGATCACTTAAAT | + |
Preference number: 5 (lower is better) Translates to: GCQSTTRLAEVESWL*HFLAYDLAYEDHLN Trigger: ATTTAAGTGATCTTCATAAGCAAGATCATAGGCTAGGAAGTGGCAGAGCCAGGATTCAACCTCGGCGAGCCTGGTGGTGCTCTGACATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336257.8 |
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CDS GCA 90 bp | TTTCCCAGGAATACGGAGTCAAGACATAGGCCAGAATATAGTCTGTaGTCACAGCAGAAGTCCAGTTGCAGAATAATGTGGGATATCATC | + |
Preference number: 5 (lower is better) Translates to: FPRNTESRHRPEYSL*SQQKSSCRIMWDII Trigger: GATGATATCCCACATTATTCTGCAACTGGACTTCTGCTGTGAGCACAGACTATATTCTGGCCTATGTCTTGACTCCGTATTCCTGGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336257.8 |
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CDS GCA 72 bp | ACCCGGGCCCTCATGCCCATCCCATGCCCCAATTACTaGCCAGTGCCCTCAGGGATCAGCCCTCAGATTCGG | + |
Preference number: 6 (lower is better) Translates to: TRALMPIPCPNY*PVPSGISPQIR Trigger: CCGAATCTGAGGGCTGATCCCTGAGGGCACTGGGCAGTAATTGGGGCATGGGATGGGCATGAGGGCCCGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336257.8 |
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CDS CAA 72 bp | CGGGCCAGGCTGAATGGCTGCCGCGTGCACAGTGTCTaGCATACGTCCTGCTTGCTGATGGTGCCTCGGGGA | + |
Preference number: 6 (lower is better) Translates to: RARLNGCRVHSV*HTSCLLMVPRG Trigger: TCCCCGAGGCACCATCAGCAAGCAGGACGTATGCAAGACACTGTGCACGCGGCAGCCATTCAGCCTGGCCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336257.8 |
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CDS GCA 72 bp | CCCTCATGCCCATCCCATGCCCCAATTACTGCCCAGTaGCCTCAGGGATCAGCCCTCAGATTCGGCTACCCT | + |
Preference number: 6 (lower is better) Translates to: PSCPSHAPITAQ*PQGSALRFGYP Trigger: AGGGTAGCCGAATCTGAGGGCTGATCCCTGAGGGCACTGGGCAGTAATTGGGGCATGGGATGGGCATGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336257.8 |
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CDS CAA 90 bp | CCAGTGCCCTCAGGGATCAGCCCTCAGATTCGGCTACCCTACCCATaGGACTTCCCAAGACTCCCAAGGTCTCAGTCGAGCACTTTCCCA | + |
Preference number: 6 (lower is better) Translates to: PVPSGISPQIRLPYP*DFPRLPRSQSSTFP Trigger: TGGGAAAGTGCTCGACTGAGACCTTGGGAGTCTTGGGAAGTCCAATGGGTAGGGTAGCCGAATCTGAGGGCTGATCCCTGAGGGCACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336257.8 |
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CDS GCA 72 bp | CCGGGAGATGATGAAGAGCAGGAGGCAGGTGGTCTGTaGCAGGAGGAGCACTGTCACTGTCTTGCTGGAGAA | + |
Preference number: 6 (lower is better) Translates to: PGDDEEQEAGGL*QEEHCHCLAGE Trigger: TTCTCCAGCAAGACAGTGACAGTGCTCCTCCTGGCACAGACCACCTGCCTCCTGCTCTTCATCATCTCCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000336257.8 ENST00000565039.1 |
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CDS CCA 72 bp | CAGGGATCAGCCCTCAGATTCGGCTACCCTACCCATTaGACTTCCCAAGACTCCCAAGGTCTCAGTCGAGCA | + |
Preference number: 6 (lower is better) Translates to: QGSALRFGYPTH*TSQDSQGLSRA Trigger: TGCTCGACTGAGACCTTGGGAGTCTTGGGAAGTCCAATGGGTAGGGTAGCCGAATCTGAGGGCTGATCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336257.8 |
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CDS CAA 72 bp | TCAGGGATCAGCCCTCAGATTCGGCTACCCTACCCATaGGACTTCCCAAGACTCCCAAGGTCTCAGTCGAGC | + |
Preference number: 6 (lower is better) Translates to: SGISPQIRLPYP*DFPRLPRSQSS Trigger: GCTCGACTGAGACCTTGGGAGTCTTGGGAAGTCCAATGGGTAGGGTAGCCGAATCTGAGGGCTGATCCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336257.8 |
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CDS CCA 72 bp | TGTCAGAGCACCACCAGGCTCGCCGAGGTTGAATCCTaGCTCTGCCACTTCCTAGCCTATGATCTTGCTTAT | + |
Preference number: 6 (lower is better) Translates to: CQSTTRLAEVES*LCHFLAYDLAY Trigger: ATAAGCAAGATCATAGGCTAGGAAGTGGCAGAGCCAGGATTCAACCTCGGCGAGCCTGGTGGTGCTCTGACA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336257.8 |
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CDS GCA 72 bp | AGCACCACCAGGCTCGCCGAGGTTGAATCCTGGCTCTaGCACTTCCTAGCCTATGATCTTGCTTATGAAGAT | + |
Preference number: 6 (lower is better) Translates to: STTRLAEVESWL*HFLAYDLAYED Trigger: ATCTTCATAAGCAAGATCATAGGCTAGGAAGTGGCAGAGCCAGGATTCAACCTCGGCGAGCCTGGTGGTGCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336257.8 |
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CDS TCA 72 bp | AGATGGGGGAAGGGAACACGCAGTCATGCCCATAACTaGGGATTGCACCTTTTACAAGGTGTGCTTCTGTAT | + |
Preference number: 6 (lower is better) Translates to: RWGKGTRSHAHN*GLHLLQGVLLY Trigger: ATACAGAAGCACACCTTGTAAAAGGTGCAATCCTCAGTTATGGGCATGACTGCGTGTTCCCTTCCCCCATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000336257.8 |
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CDS TCA 72 bp | TTAAATCTCTCTGTGACGGATCACTTTACCCGTGTGTaGAAGAGGGATAATTCCGGTACCTGGCTCACAGGA | + |
Preference number: 6 (lower is better) Translates to: LNLSVTDHFTRV*KRDNSGTWLTG Trigger: TCCTGTGAGCCAGGTACCGGAATTATCCCTCTTTCACACACGGGTAAAGTGATCCGTCACAGAGAGATTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336257.8 |
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CDS GCA 72 bp | AATACGGAGTCAAGACATAGGCCAGAATATAGTCTGTaGTCACAGCAGAAGTCCAGTTGCAGAATAATGTGG | + |
Preference number: 6 (lower is better) Translates to: NTESRHRPEYSL*SQQKSSCRIMW Trigger: CCACATTATTCTGCAACTGGACTTCTGCTGTGAGCACAGACTATATTCTGGCCTATGTCTTGACTCCGTATT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336257.8 |