RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHST5 (Homo sapiens)

Ensembl gene IDs: ENSG00000135702

Ensembl transcript IDs: ENST00000336257.7, ENST00000336257.8, ENST00000565039.1

Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp CTTACTGCAACCTCCACCTCTGGAGTCCAAGTGATTCTCCCACCTCAGCCTCCTGTCGCCTCCTGGGCCTaGCGACCACAGTTCGGGGCC +
Preference number: 2 (lower is better)
Translates to: LTATSTSGVQVILPPQPPVASWA*RPQFGA
Trigger: GGCCCCGAACTGTGGTCGCCAGGCCCAGGAGGCGAC...AGGAGGCTGAGGTGGGAGAATCACTTGGACTCCAGAGGTGGAGGTTGCAGTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336257.7
3UTR-3UTR TCA 90 bp CTTACTGCAACCTCCACCTCTGGAGTCCAAGTGATTCTCCCACCTCAGCCTCCTCTGGTTTCGAACTCCTaGCCTCAGGTGATCCACCCG +
Preference number: 2 (lower is better)
Translates to: LTATSTSGVQVILPPQPPLVSNS*PQVIHP
Trigger: CGGGTGGATCACCTGAGGTCAGGAGTTCGAAACCAG...AGGAGGCTGAGGTGGGAGAATCACTTGGACTCCAGAGGTGGAGGTTGCAGTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336257.7
3UTR-3UTR CCA 90 bp CTTACTGCAACCTCCACCTCTGGAGTCCAAGTGATTCTCCCACCTCAGCCTCCTCCACCGCACCCGGCCTaGCACACATTTAATTTAATT +
Preference number: 2 (lower is better)
Translates to: LTATSTSGVQVILPPQPPPPHPA*HTFNLI
Trigger: AATTAAATTAAATGTGTGCCAGGCCGGGTGCGGTGG...AGGAGGCTGAGGTGGGAGAATCACTTGGACTCCAGAGGTGGAGGTTGCAGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336257.7
3UTR GCA 72 bp CCCAAGCTAGGGTGCAGTGGCATGATCTCAGCTTACTaGAACCTCCACCTCTGGAGTCCAAGTGATTCTCCC +
Preference number: 3 (lower is better)
Translates to: PKLGCSGMISAY*NLHLWSPSDSP
Trigger: GGGAGAATCACTTGGACTCCAGAGGTGGAGGTTGCAGTAAGCTGAGATCATGCCACTGCACCCTAGCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336257.7
CDS GCA 90 bp GGACCCGGGCCCTCATGCCCATCCCATGCCCCAATTACTGCCCAGTaGCCTCAGGGATCAGCCCTCAGATTCGGCTACCCTACCCATTGG +
Preference number: 5 (lower is better)
Translates to: GPGPSCPSHAPITAQ*PQGSALRFGYPTHW
Trigger: CCAATGGGTAGGGTAGCCGAATCTGAGGGCTGATCCCTGAGGGCACTGGGCAGTAATTGGGGCATGGGATGGGCATGAGGGCCCGGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336257.8
CDS GCA 90 bp ACTTTAGGGACCCGGGCCCTCATGCCCATCCCATGCCCCAATTACTaGCCAGTGCCCTCAGGGATCAGCCCTCAGATTCGGCTACCCTAC +
Preference number: 5 (lower is better)
Translates to: TLGTRALMPIPCPNY*PVPSGISPQIRLPY
Trigger: GTAGGGTAGCCGAATCTGAGGGCTGATCCCTGAGGGCACTGGGCAGTAATTGGGGCATGGGATGGGCATGAGGGCCCGGGTCCCTAAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336257.8
CDS CCA 90 bp CAGTGCCCTCAGGGATCAGCCCTCAGATTCGGCTACCCTACCCATTaGACTTCCCAAGACTCCCAAGGTCTCAGTCGAGCACTTTCCCAG +
Preference number: 5 (lower is better)
Translates to: QCPQGSALRFGYPTH*TSQDSQGLSRALSQ
Trigger: CTGGGAAAGTGCTCGACTGAGACCTTGGGAGTCTTGGGAAGTCCAATGGGTAGGGTAGCCGAATCTGAGGGCTGATCCCTGAGGGCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336257.8
CDS GCA 90 bp GGATGTCAGAGCACCACCAGGCTCGCCGAGGTTGAATCCTGGCTCTaGCACTTCCTAGCCTATGATCTTGCTTATGAAGATCACTTAAAT +
Preference number: 5 (lower is better)
Translates to: GCQSTTRLAEVESWL*HFLAYDLAYEDHLN
Trigger: ATTTAAGTGATCTTCATAAGCAAGATCATAGGCTAGGAAGTGGCAGAGCCAGGATTCAACCTCGGCGAGCCTGGTGGTGCTCTGACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336257.8
CDS GCA 90 bp TTTCCCAGGAATACGGAGTCAAGACATAGGCCAGAATATAGTCTGTaGTCACAGCAGAAGTCCAGTTGCAGAATAATGTGGGATATCATC +
Preference number: 5 (lower is better)
Translates to: FPRNTESRHRPEYSL*SQQKSSCRIMWDII
Trigger: GATGATATCCCACATTATTCTGCAACTGGACTTCTGCTGTGAGCACAGACTATATTCTGGCCTATGTCTTGACTCCGTATTCCTGGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336257.8
CDS GCA 72 bp ACCCGGGCCCTCATGCCCATCCCATGCCCCAATTACTaGCCAGTGCCCTCAGGGATCAGCCCTCAGATTCGG +
Preference number: 6 (lower is better)
Translates to: TRALMPIPCPNY*PVPSGISPQIR
Trigger: CCGAATCTGAGGGCTGATCCCTGAGGGCACTGGGCAGTAATTGGGGCATGGGATGGGCATGAGGGCCCGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336257.8
CDS CAA 72 bp CGGGCCAGGCTGAATGGCTGCCGCGTGCACAGTGTCTaGCATACGTCCTGCTTGCTGATGGTGCCTCGGGGA +
Preference number: 6 (lower is better)
Translates to: RARLNGCRVHSV*HTSCLLMVPRG
Trigger: TCCCCGAGGCACCATCAGCAAGCAGGACGTATGCAAGACACTGTGCACGCGGCAGCCATTCAGCCTGGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336257.8
CDS GCA 72 bp CCCTCATGCCCATCCCATGCCCCAATTACTGCCCAGTaGCCTCAGGGATCAGCCCTCAGATTCGGCTACCCT +
Preference number: 6 (lower is better)
Translates to: PSCPSHAPITAQ*PQGSALRFGYP
Trigger: AGGGTAGCCGAATCTGAGGGCTGATCCCTGAGGGCACTGGGCAGTAATTGGGGCATGGGATGGGCATGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336257.8
CDS CAA 90 bp CCAGTGCCCTCAGGGATCAGCCCTCAGATTCGGCTACCCTACCCATaGGACTTCCCAAGACTCCCAAGGTCTCAGTCGAGCACTTTCCCA +
Preference number: 6 (lower is better)
Translates to: PVPSGISPQIRLPYP*DFPRLPRSQSSTFP
Trigger: TGGGAAAGTGCTCGACTGAGACCTTGGGAGTCTTGGGAAGTCCAATGGGTAGGGTAGCCGAATCTGAGGGCTGATCCCTGAGGGCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336257.8
CDS GCA 72 bp CCGGGAGATGATGAAGAGCAGGAGGCAGGTGGTCTGTaGCAGGAGGAGCACTGTCACTGTCTTGCTGGAGAA +
Preference number: 6 (lower is better)
Translates to: PGDDEEQEAGGL*QEEHCHCLAGE
Trigger: TTCTCCAGCAAGACAGTGACAGTGCTCCTCCTGGCACAGACCACCTGCCTCCTGCTCTTCATCATCTCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336257.8
ENST00000565039.1
CDS CCA 72 bp CAGGGATCAGCCCTCAGATTCGGCTACCCTACCCATTaGACTTCCCAAGACTCCCAAGGTCTCAGTCGAGCA +
Preference number: 6 (lower is better)
Translates to: QGSALRFGYPTH*TSQDSQGLSRA
Trigger: TGCTCGACTGAGACCTTGGGAGTCTTGGGAAGTCCAATGGGTAGGGTAGCCGAATCTGAGGGCTGATCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336257.8
CDS CAA 72 bp TCAGGGATCAGCCCTCAGATTCGGCTACCCTACCCATaGGACTTCCCAAGACTCCCAAGGTCTCAGTCGAGC +
Preference number: 6 (lower is better)
Translates to: SGISPQIRLPYP*DFPRLPRSQSS
Trigger: GCTCGACTGAGACCTTGGGAGTCTTGGGAAGTCCAATGGGTAGGGTAGCCGAATCTGAGGGCTGATCCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336257.8
CDS CCA 72 bp TGTCAGAGCACCACCAGGCTCGCCGAGGTTGAATCCTaGCTCTGCCACTTCCTAGCCTATGATCTTGCTTAT +
Preference number: 6 (lower is better)
Translates to: CQSTTRLAEVES*LCHFLAYDLAY
Trigger: ATAAGCAAGATCATAGGCTAGGAAGTGGCAGAGCCAGGATTCAACCTCGGCGAGCCTGGTGGTGCTCTGACA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336257.8
CDS GCA 72 bp AGCACCACCAGGCTCGCCGAGGTTGAATCCTGGCTCTaGCACTTCCTAGCCTATGATCTTGCTTATGAAGAT +
Preference number: 6 (lower is better)
Translates to: STTRLAEVESWL*HFLAYDLAYED
Trigger: ATCTTCATAAGCAAGATCATAGGCTAGGAAGTGGCAGAGCCAGGATTCAACCTCGGCGAGCCTGGTGGTGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336257.8
CDS TCA 72 bp AGATGGGGGAAGGGAACACGCAGTCATGCCCATAACTaGGGATTGCACCTTTTACAAGGTGTGCTTCTGTAT +
Preference number: 6 (lower is better)
Translates to: RWGKGTRSHAHN*GLHLLQGVLLY
Trigger: ATACAGAAGCACACCTTGTAAAAGGTGCAATCCTCAGTTATGGGCATGACTGCGTGTTCCCTTCCCCCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336257.8
CDS TCA 72 bp TTAAATCTCTCTGTGACGGATCACTTTACCCGTGTGTaGAAGAGGGATAATTCCGGTACCTGGCTCACAGGA +
Preference number: 6 (lower is better)
Translates to: LNLSVTDHFTRV*KRDNSGTWLTG
Trigger: TCCTGTGAGCCAGGTACCGGAATTATCCCTCTTTCACACACGGGTAAAGTGATCCGTCACAGAGAGATTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336257.8
CDS GCA 72 bp AATACGGAGTCAAGACATAGGCCAGAATATAGTCTGTaGTCACAGCAGAAGTCCAGTTGCAGAATAATGTGG +
Preference number: 6 (lower is better)
Translates to: NTESRHRPEYSL*SQQKSSCRIMW
Trigger: CCACATTATTCTGCAACTGGACTTCTGCTGTGAGCACAGACTATATTCTGGCCTATGTCTTGACTCCGTATT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336257.8