RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHST15 (Homo sapiens)

Ensembl gene IDs: ENSG00000182022

Ensembl transcript IDs: ENST00000346248.7, ENST00000435907.6, ENST00000462406.1, ENST00000476765.1, ENST00000628426.1

Found 642 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCGCCAGCTGCACAGGAAGGCAAGGACCACACCTGTCCTGGCATTaGTGTGGCCCCAGGACCCAGCGTCATGCAGGGGACATAGTGGCA +
Preference number: 1 (lower is better)
Translates to: PASCTGRQGPHLSWH*CGPRTQRHAGDIVA
Trigger: TGCCACTATGTCCCCTGCATGACGCTGGGTCCTGGGGCCACAGCAATGCCAGGACAGGTGTGGTCCTTGCCTTCCTGTGCAGCTGGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR GCA 90 bp CCTGAAGCCCCGTTCTCAGGTGGTTCTCTGGTGGCCAGAGCTCCCTaGCCAGCCTCCATCTTCTCTCCCCGCCAGCTGCACAGGAAGGCA +
Preference number: 1 (lower is better)
Translates to: PEAPFSGGSLVARAP*PASIFSPRQLHRKA
Trigger: TGCCTTCCTGTGCAGCTGGCGGGGAGAGAAGATGGAGGCTGGGCAGGGAGCTCTGGCCACCAGAGAACCACCTGAGAACGGGGCTTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR TCA 90 bp CCCACGGCCTCTGTAGTAAGAAAGAGGGGGCAGAGCCTCTTGGCCTaGAGTCCCACCACCTGGGGGCTTCCAAGACTCCACAGCAGGCCT +
Preference number: 1 (lower is better)
Translates to: PTASVVRKRGQSLLA*SPTTWGLPRLHSRP
Trigger: AGGCCTGCTGTGGAGTCTTGGAAGCCCCCAGGTGGTGGGACTTCAGGCCAAGAGGCTCTGCCCCCTCTTTCTTACTACAGAGGCCGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR GCA 90 bp AGTCCAACAGGGCAGCCTGGAATCCCACCTGCTGCCCCTGCATGCTaGCTCCCAGATCCCACGGCCTCTGTAGTAAGAAAGAGGGGGCAG +
Preference number: 1 (lower is better)
Translates to: SPTGQPGIPPAAPAC*LPDPTASVVRKRGQ
Trigger: CTGCCCCCTCTTTCTTACTACAGAGGCCGTGGGATCTGGGAGGCAGCATGCAGGGGCAGCAGGTGGGATTCCAGGCTGCCCTGTTGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR GCA 90 bp CAAAGTCCAACAGGGCAGCCTGGAATCCCACCTGCTGCCCCTGCATaGTGCCTCCCAGATCCCACGGCCTCTGTAGTAAGAAAGAGGGGG +
Preference number: 1 (lower is better)
Translates to: QSPTGQPGIPPAAPA*CLPDPTASVVRKRG
Trigger: CCCCCTCTTTCTTACTACAGAGGCCGTGGGATCTGGGAGGCAGCATGCAGGGGCAGCAGGTGGGATTCCAGGCTGCCCTGTTGGACTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR GCA 90 bp GCCTTCCCTAGGTGTTCTCTCCACACCCAGTGCAGGCCAGCTGGCTaGATCCCCAAGCTCCAGGACGCTCAGAGCAGAGCTGAATTCTTG +
Preference number: 1 (lower is better)
Translates to: AFPRCSLHTQCRPAG*IPKLQDAQSRAEFL
Trigger: CAAGAATTCAGCTCTGCTCTGAGCGTCCTGGAGCTTGGGGATGCAGCCAGCTGGCCTGCACTGGGTGTGGAGAGAACACCTAGGGAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR GCA 90 bp CCTTGCCAAACTACAAAGTCCAACAGGGCAGCCTGGAATCCCACCTaGTGCCCCTGCATGCTGCCTCCCAGATCCCACGGCCTCTGTAGT +
Preference number: 1 (lower is better)
Translates to: PCQTTKSNRAAWNPT*CPCMLPPRSHGLCS
Trigger: ACTACAGAGGCCGTGGGATCTGGGAGGCAGCATGCAGGGGCAGCAGGTGGGATTCCAGGCTGCCCTGTTGGACTTTGTAGTTTGGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR CCA 90 bp CAGCTGCACAGGAAGGCAAGGACCACACCTGTCCTGGCATTGCTGTaGCCCCAGGACCCAGCGTCATGCAGGGGACATAGTGGCAAGAAT +
Preference number: 1 (lower is better)
Translates to: QLHRKARTTPVLALL*PQDPASCRGHSGKN
Trigger: ATTCTTGCCACTATGTCCCCTGCATGACGCTGGGTCCTGGGGCCACAGCAATGCCAGGACAGGTGTGGTCCTTGCCTTCCTGTGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR GCA 90 bp TGCCAAACTACAAAGTCCAACAGGGCAGCCTGGAATCCCACCTGCTaGCCCTGCATGCTGCCTCCCAGATCCCACGGCCTCTGTAGTAAG +
Preference number: 1 (lower is better)
Translates to: CQTTKSNRAAWNPTC*PCMLPPRSHGLCSK
Trigger: CTTACTACAGAGGCCGTGGGATCTGGGAGGCAGCATGCAGGGGCAGCAGGTGGGATTCCAGGCTGCCCTGTTGGACTTTGTAGTTTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR CCA 90 bp CCTGACCCACACCAATGGCTGGTTCCAAAGTGTACTCCTCCTACCTaGCACCAGAGCAGGCTCTGGGGTTACCTGTGTCCCTGTGGCATC +
Preference number: 1 (lower is better)
Translates to: PDPHQWLVPKCTPPT*HQSRLWGYLCPCGI
Trigger: GATGCCACAGGGACACAGGTAACCCCAGAGCCTGCTCTGGTGCCAGGTAGGAGGAGTACACTTTGGAACCAGCCATTGGTGTGGGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR TCA 90 bp GCCAGCTGGCTGCATCCCCAAGCTCCAGGACGCTCAGAGCAGAGCTaGATTCTTGAGAAACTGGGGTCTCCAATGGCCTCGGATAGAGGA +
Preference number: 1 (lower is better)
Translates to: ASWLHPQAPGRSEQS*ILEKLGSPMASDRG
Trigger: TCCTCTATCCGAGGCCATTGGAGACCCCAGTTTCTCAAGAATTCAGCTCTGCTCTGAGCGTCCTGGAGCTTGGGGATGCAGCCAGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR TCA 90 bp CTCTGGAACACGCAGCGGCAATGCTCGCTGCATAAGCCCTGCTGTTaGAGTACACAGCCAGCCCAGGGAGCCCAGCATGGAAAACTATCC +
Preference number: 1 (lower is better)
Translates to: LWNTQRQCSLHKPCC*STQPAQGAQHGKLS
Trigger: GGATAGTTTTCCATGCTGGGCTCCCTGGGCTGGCTGTGTACTTCAACAGCAGGGCTTATGCAGCGAGCATTGCCGCTGCGTGTTCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR GCA 90 bp TCAGTAGCAAAAACAGCCCTGGCCATCCTGGCGCTCAGAGCCCTCTaGACACCTTCGAACGGGCTGTGTGTCCCTTCTCTGATGGCAGAA +
Preference number: 1 (lower is better)
Translates to: SVAKTALAILALRAL*TPSNGLCVPSLMAE
Trigger: TTCTGCCATCAGAGAAGGGACACACAGCCCGTTCGAAGGTGTGCAGAGGGCTCTGAGCGCCAGGATGGCCAGGGCTGTTTTTGCTACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR GCA 90 bp GCGGCTGCTCCCAGTGCCGGCTATAGAGAAGGTGGGGACTGTCCCTaGAAGTGGGAGTTCAGGACACACGCTCCTTCAGTAGCAAAAACA +
Preference number: 1 (lower is better)
Translates to: AAAPSAGYREGGDCP*KWEFRTHAPSVAKT
Trigger: TGTTTTTGCTACTGAAGGAGCGTGTGTCCTGAACTCCCACTTGCAGGGACAGTCCCCACCTTCTCTATAGCCGGCACTGGGAGCAGCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR GCA 90 bp TGGGGGCTTCCAAGACTCCACAGCAGGCCTGTTGGTGCCTTGCTATaGGAGACGCTGAGCAGAGCAAGGCTTGTAAAGCCACTCTGGAAC +
Preference number: 1 (lower is better)
Translates to: WGLPRLHSRPVGALL*ETLSRARLVKPLWN
Trigger: GTTCCAGAGTGGCTTTACAAGCCTTGCTCTGCTCAGCGTCTCGCATAGCAAGGCACCAACAGGCCTGCTGTGGAGTCTTGGAAGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR GCA 90 bp ACCACACCTGTCCTGGCATTGCTGTGGCCCCAGGACCCAGCGTCATaGAGGGGACATAGTGGCAAGAATGAACGCAGGAATGCAAGACAG +
Preference number: 1 (lower is better)
Translates to: TTPVLALLWPQDPAS*RGHSGKNERRNARQ
Trigger: CTGTCTTGCATTCCTGCGTTCATTCTTGCCACTATGTCCCCTGCATGACGCTGGGTCCTGGGGCCACAGCAATGCCAGGACAGGTGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR CCA 90 bp CCCAAGCTCCAGGACGCTCAGAGCAGAGCTGAATTCTTGAGAAACTaGGGTCTCCAATGGCCTCGGATAGAGGAGCTCTGTGAGGGGTCC +
Preference number: 1 (lower is better)
Translates to: PKLQDAQSRAEFLRN*GLQWPRIEELCEGS
Trigger: GGACCCCTCACAGAGCTCCTCTATCCGAGGCCATTGGAGACCCCAGTTTCTCAAGAATTCAGCTCTGCTCTGAGCGTCCTGGAGCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR CCA 90 bp GCTCCCAGTGCCGGCTATAGAGAAGGTGGGGACTGTCCCTGCAAGTaGGAGTTCAGGACACACGCTCCTTCAGTAGCAAAAACAGCCCTG +
Preference number: 1 (lower is better)
Translates to: APSAGYREGGDCPCK*EFRTHAPSVAKTAL
Trigger: CAGGGCTGTTTTTGCTACTGAAGGAGCGTGTGTCCTGAACTCCCACTTGCAGGGACAGTCCCCACCTTCTCTATAGCCGGCACTGGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR CCA 90 bp GAGGAAGCAGAGGCAGCCGAAGTGCCCTCTGGAGAGAAAGGCCCCTaGAGGGAAAAACCATGTCTGGATGGCATTGAGTGGCACAGAAGG +
Preference number: 1 (lower is better)
Translates to: EEAEAAEVPSGEKGP*REKPCLDGIEWHRR
Trigger: CCTTCTGTGCCACTCAATGCCATCCAGACATGGTTTTTCCCTCCAGGGGCCTTTCTCTCCAGAGGGCACTTCGGCTGCCTCTGCTTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR CCA 90 bp GAGCCAGCAAATGGCCAAGCTGGAAACCTGACCCACACCAATGGCTaGTTCCAAAGTGTACTCCTCCTACCTGGCACCAGAGCAGGCTCT +
Preference number: 1 (lower is better)
Translates to: EPANGQAGNLTHTNG*FQSVLLLPGTRAGS
Trigger: AGAGCCTGCTCTGGTGCCAGGTAGGAGGAGTACACTTTGGAACCAGCCATTGGTGTGGGTCAGGTTTCCAGCTTGGCCATTTGCTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR CCA 90 bp CACAGAGCCAGCAAATGGCCAAGCTGGAAACCTGACCCACACCAATaGCTGGTTCCAAAGTGTACTCCTCCTACCTGGCACCAGAGCAGG +
Preference number: 1 (lower is better)
Translates to: HRASKWPSWKPDPHQ*LVPKCTPPTWHQSR
Trigger: CCTGCTCTGGTGCCAGGTAGGAGGAGTACACTTTGGAACCAGCCATTGGTGTGGGTCAGGTTTCCAGCTTGGCCATTTGCTGGCTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR CCA 90 bp GACGCTCAGAGCAGAGCTGAATTCTTGAGAAACTGGGGTCTCCAATaGCCTCGGATAGAGGAGCTCTGTGAGGGGTCCATTGCTGAGCTC +
Preference number: 1 (lower is better)
Translates to: DAQSRAEFLRNWGLQ*PRIEELCEGSIAEL
Trigger: GAGCTCAGCAATGGACCCCTCACAGAGCTCCTCTATCCGAGGCCATTGGAGACCCCAGTTTCTCAAGAATTCAGCTCTGCTCTGAGCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR CCA 90 bp CTGGTTCCAAAGTGTACTCCTCCTACCTGGCACCAGAGCAGGCTCTaGGGTTACCTGTGTCCCTGTGGCATCTTCCTTGCCAAACTACAA +
Preference number: 1 (lower is better)
Translates to: LVPKCTPPTWHQSRL*GYLCPCGIFLAKLQ
Trigger: TTGTAGTTTGGCAAGGAAGATGCCACAGGGACACAGGTAACCCCAGAGCCTGCTCTGGTGCCAGGTAGGAGGAGTACACTTTGGAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR TCA 90 bp TCTATAAAAGGGTTGTGTCCAGAGCGGAGGAGCCTCATTAGCAACTaGACAGAACCCACTCAGAAGACGCACTCACCCACACGTGCGCGT +
Preference number: 1 (lower is better)
Translates to: SIKGLCPERRSLISN*TEPTQKTHSPTRAR
Trigger: ACGCGCACGTGTGGGTGAGTGCGTCTTCTGAGTGGGTTCTGTTCAGTTGCTAATGAGGCTCCTCCGCTCTGGACACAACCCTTTTATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR TCA 90 bp AACTGCCTAGAGTCACAGAGCCAGCAAATGGCCAAGCTGGAAACCTaGCCCACACCAATGGCTGGTTCCAAAGTGTACTCCTCCTACCTG +
Preference number: 1 (lower is better)
Translates to: NCLESQSQQMAKLET*PTPMAGSKVYSSYL
Trigger: CAGGTAGGAGGAGTACACTTTGGAACCAGCCATTGGTGTGGGTCAGGTTTCCAGCTTGGCCATTTGCTGGCTCTGTGACTCTAGGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR TCA 90 bp TGGCCTGAGAACTTTGGTTCACAGGAAGCTTCCCTTGACAATACTTaGGTGCAAAGCTTCATCCAGGTCCCACCTGGGCTGTTGCCAAGG +
Preference number: 1 (lower is better)
Translates to: WPENFGSQEASLDNT*VQSFIQVPPGLLPR
Trigger: CCTTGGCAACAGCCCAGGTGGGACCTGGATGAAGCTTTGCACTCAAGTATTGTCAAGGGAAGCTTCCTGTGAACCAAAGTTCTCAGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR GCA 90 bp GAGTGCAAAGCTTCATCCAGGTCCCACCTGGGCTGTTGCCAAGGATaGTCAAGCGTTCTCTTCAATCTTCCCTGTGACTTCCAAGAAACG +
Preference number: 1 (lower is better)
Translates to: ECKASSRSHLGCCQG*SSVLFNLPCDFQET
Trigger: CGTTTCTTGGAAGTCACAGGGAAGATTGAAGAGAACGCTTGAGCATCCTTGGCAACAGCCCAGGTGGGACCTGGATGAAGCTTTGCACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR GCA 90 bp TCTGATGGCAGAAAGACAACACCAGCAGAAAGACGGCTGAACAACTaGAGATCCTCCTACCCCCGAAGCCTGGTCTGTCTCACACATACA +
Preference number: 1 (lower is better)
Translates to: SDGRKTTPAERRLNN*RSSYPRSLVCLTHT
Trigger: TGTATGTGTGAGACAGACCAGGCTTCGGGGGTAGGAGGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTTGTCTTTCTGCCATCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR GCA 90 bp CTGAGAACTTTGGTTCACAGGAAGCTTCCCTTGACAATACTTGAGTaGAAAGCTTCATCCAGGTCCCACCTGGGCTGTTGCCAAGGATGC +
Preference number: 1 (lower is better)
Translates to: LRTLVHRKLPLTILE*KASSRSHLGCCQGC
Trigger: GCATCCTTGGCAACAGCCCAGGTGGGACCTGGATGAAGCTTTGCACTCAAGTATTGTCAAGGGAAGCTTCCTGTGAACCAAAGTTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR GCA 90 bp ACAATACTTGAGTGCAAAGCTTCATCCAGGTCCCACCTGGGCTGTTaGCAAGGATGCTCAAGCGTTCTCTTCAATCTTCCCTGTGACTTC +
Preference number: 1 (lower is better)
Translates to: TILECKASSRSHLGC*QGCSSVLFNLPCDF
Trigger: GAAGTCACAGGGAAGATTGAAGAGAACGCTTGAGCATCCTTGGCAACAGCCCAGGTGGGACCTGGATGAAGCTTTGCACTCAAGTATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR CCA 90 bp TCAACACGCCACGTTCAGCCCAAGTTCAGCTTGTGCATTGTGTTTTaGAATTGGGACACGAGTATCTATAGTCCCTTGCTGGGTGAGGAA +
Preference number: 1 (lower is better)
Translates to: STRHVQPKFSLCIVF*NWDTSIYSPLLGEE
Trigger: TTCCTCACCCAGCAAGGGACTATAGATACTCGTGTCCCAATTCCAAAACACAATGCACAAGCTGAACTTGGGCTGAACGTGGCGTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR TCA 90 bp ATTATTACCCCATTGTATGACAAAGCAACTGAGTCTCAGAAAGGCTaGGACAACTGCCTAGAGTCACAGAGCCAGCAAATGGCCAAGCTG +
Preference number: 1 (lower is better)
Translates to: IITPLYDKATESQKG*DNCLESQSQQMAKL
Trigger: CAGCTTGGCCATTTGCTGGCTCTGTGACTCTAGGCAGTTGTCTCAGCCTTTCTGAGACTCAGTTGCTTTGTCATACAATGGGGTAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR CCA 90 bp CAATACCATGTTGTGAGAAATGCTCCAATTTGCTTTGGTTTTGAATaGCAGGCTCGAGAACCACCGCCCAGAACGGAACCTATTCTGTCA +
Preference number: 1 (lower is better)
Translates to: QYHVVRNAPICFGFE*QAREPPPRTEPILS
Trigger: TGACAGAATAGGTTCCGTTCTGGGCGGTGGTTCTCGAGCCTGCCATTCAAAACCAAAGCAAATTGGAGCATTTCTCACAACATGGTATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR CCA 90 bp GCAAGAATGAACGCAGGAATGCAAGACAGACCCATCACAACAGCCTaGTACAGCAGCATTATTACCCCATTGTATGACAAAGCAACTGAG +
Preference number: 1 (lower is better)
Translates to: ARMNAGMQDRPITTA*YSSIITPLYDKATE
Trigger: CTCAGTTGCTTTGTCATACAATGGGGTAATAATGCTGCTGTACCAGGCTGTTGTGATGGGTCTGTCTTGCATTCCTGCGTTCATTCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR TCA 90 bp CCAACAAAACAATCCACCGCTCAAGAGAATGCTCTTAAGACAATTTaGGAGTTGGGTGTCCTCATGTCTGCCGATTCTAATTGCTGGGTG +
Preference number: 1 (lower is better)
Translates to: PTKQSTAQENALKTI*ELGVLMSADSNCWV
Trigger: CACCCAGCAATTAGAATCGGCAGACATGAGGACACCCAACTCTCAAATTGTCTTAAGAGCATTCTCTTGAGCGGTGGATTGTTTTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR-3UTR CCA 90 bp AGGCGGCTGGCTGCGTTCTGTATGGTAGGTGGTGCTGACCACTGGGCCTCTGCAAGCCCCGTTCTCAGGTaGTTCTCTGGTGGCCAGAGC +
Preference number: 2 (lower is better)
Translates to: RRLAAFCMVGGADHWASASPVLR*FSGGQS
Trigger: GCTCTGGCCACCAGAGAACCACCTGAGAACGGGGCT...TGCAGAGGCCCAGTGGTCAGCACCACCTACCATACAGAACGCAGCCAGCCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR-3UTR GCA 90 bp CTGGCCAACTCTCCTTCAGGCCTCAGCACAGACATTCCCTCTCCTAAGAACCTGGCTGCCCCTGCATGCTaGCTCCCAGATCCCACGGCC +
Preference number: 2 (lower is better)
Translates to: LANSPSGLSTDIPSPKNLAAPAC*LPDPTA
Trigger: GGCCGTGGGATCTGGGAGGCAGCATGCAGGGGCAGC...CAGGTTCTTAGGAGAGGGAATGTCTGTGCTGAGGCCTGAAGGAGAGTTGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR-3UTR CCA 90 bp CTGAACAGAACCCACTCAGAAGACGCACTCACCCACACGTGCGCGTACACACACGCCAGATTTCCCTGCTaGCGGCTGCTCCCAGTGCCG +
Preference number: 2 (lower is better)
Translates to: LNRTHSEDALTHTCAYTHARFPC*RLLPVP
Trigger: CGGCACTGGGAGCAGCCGCCAGCAGGGAAATCTGGC...GTGTGTGTACGCGCACGTGTGGGTGAGTGCGTCTTCTGAGTGGGTTCTGTTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR GCA 90 bp CTGAACAGAACCCACTCAGAAGACGCACTCACCCACACGTGCGCGTACACACACGCGCTCAGAGCCCTCTaGACACCTTCGAACGGGCTG +
Preference number: 2 (lower is better)
Translates to: LNRTHSEDALTHTCAYTHALRAL*TPSNGL
Trigger: CAGCCCGTTCGAAGGTGTGCAGAGGGCTCTGAGCGC...GTGTGTGTACGCGCACGTGTGGGTGAGTGCGTCTTCTGAGTGGGTTCTGTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR GCA 90 bp ACGGAACCTATTCTGTCAGCAAGAGCCGGGCCTCGAATGAGAGGAAGCAGAGGCCAGGCCAGATTTCCCTaGTGGCGGCTGCTCCCAGTG +
Preference number: 2 (lower is better)
Translates to: TEPILSARAGPRMRGSRGQARFP*WRLLPV
Trigger: CACTGGGAGCAGCCGCCAGCAGGGAAATCTGGCCTG...GCCTCTGCTTCCTCTCATTCGAGGCCCGGCTCTTGCTGACAGAATAGGTTCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR CCA 90 bp TGCTCTCAGTTCCCTGGCCAACTCTCCTTCAGGCCTCAGCACAGACATTCCCTCTCTCAGGTGGTTCTCTaGTGGCCAGAGCTCCCTGCC +
Preference number: 2 (lower is better)
Translates to: CSQFPGQLSFRPQHRHSLSQVVL*WPELPA
Trigger: GGCAGGGAGCTCTGGCCACCAGAGAACCACCTGAGA...GAGGGAATGTCTGTGCTGAGGCCTGAAGGAGAGTTGGCCAGGGAACTGAGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR-3UTR TCA 90 bp AGAATGAACGCAGGAATGCAAGACAGACCCATCACAACAGCCTGGTACAGCAGCCAGAGCCTCTTGGCCTaGAGTCCCACCACCTGGGGG +
Preference number: 2 (lower is better)
Translates to: RMNAGMQDRPITTAWYSSQSLLA*SPTTWG
Trigger: CCCCCAGGTGGTGGGACTTCAGGCCAAGAGGCTCTG...GCTGCTGTACCAGGCTGTTGTGATGGGTCTGTCTTGCATTCCTGCGTTCATTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR-3UTR TCA 90 bp AGCTGCACAGGAAGGCAAGGACCACACCTGTCCTGGCATTGCTGTGGCCCCAGGGAGTCTCAGAAAGGCTaGGACAACTGCCTAGAGTCA +
Preference number: 2 (lower is better)
Translates to: SCTGRQGPHLSWHCCGPRESQKG*DNCLES
Trigger: TGACTCTAGGCAGTTGTCTCAGCCTTTCTGAGACTC...CCTGGGGCCACAGCAATGCCAGGACAGGTGTGGTCCTTGCCTTCCTGTGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR-3UTR CCA 90 bp CCAGCTGCACAGGAAGGCAAGGACCACACCTGTCCTGGCATTGCTGTGGCCCCACCTGACCCACACCAATaGCTGGTTCCAAAGTGTACT +
Preference number: 2 (lower is better)
Translates to: PAAQEGKDHTCPGIAVAPPDPHQ*LVPKCT
Trigger: AGTACACTTTGGAACCAGCCATTGGTGTGGGTCAGG...TGGGGCCACAGCAATGCCAGGACAGGTGTGGTCCTTGCCTTCCTGTGCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR-3UTR CCA 90 bp ACGGAACCTATTCTGTCAGCAAGAGCCGGGCCTCGAATGAGAGGAAGCAGAGGCTGCACTTTCTGGCTTTaGTGGGCGAGACCTTGGCCT +
Preference number: 2 (lower is better)
Translates to: TEPILSARAGPRMRGSRGCTFWL*WARPWP
Trigger: AGGCCAAGGTCTCGCCCACCAAAGCCAGAAAGTGCA...GCCTCTGCTTCCTCTCATTCGAGGCCCGGCTCTTGCTGACAGAATAGGTTCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR CCA 90 bp AGTCCCACCACCTGGGGGCTTCCAAGACTCCACAGCAGGCCTGTTGGTGCCTTGAGACAATTTGAGAGTTaGGTGTCCTCATGTCTGCCG +
Preference number: 2 (lower is better)
Translates to: SPTTWGLPRLHSRPVGALRQFES*VSSCLP
Trigger: CGGCAGACATGAGGACACCCAACTCTCAAATTGTCT...CAAGGCACCAACAGGCCTGCTGTGGAGTCTTGGAAGCCCCCAGGTGGTGGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR-3UTR CCA 90 bp CTGGCCAACTCTCCTTCAGGCCTCAGCACAGACATTCCCTCTCCTAAGAACCTGCCAGGGAGCCCAGCATaGAAAACTATCCCGGGGCTA +
Preference number: 2 (lower is better)
Translates to: LANSPSGLSTDIPSPKNLPGSPA*KTIPGL
Trigger: TAGCCCCGGGATAGTTTTCCATGCTGGGCTCCCTGG...CAGGTTCTTAGGAGAGGGAATGTCTGTGCTGAGGCCTGAAGGAGAGTTGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR-3UTR GCA 90 bp TGGAAACCTGACCCACACCAATGGCTGGTTCCAAAGTGTACTCCTCCTACCTGGCAGCAGGCCTGTTGGTaGCTTGCTATGCGAGACGCT +
Preference number: 2 (lower is better)
Translates to: WKPDPHQWLVPKCTPPTWQQACW*LAMRDA
Trigger: AGCGTCTCGCATAGCAAGGCACCAACAGGCCTGCTG...CCAGGTAGGAGGAGTACACTTTGGAACCAGCCATTGGTGTGGGTCAGGTTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR-3UTR GCA 90 bp ACTATCTTCTGCTTAAAACCCTCTGAGGGGTCCCATCTCTCTCAGGGTGATGTCGCCTGGAATCCCACCTaGTGCCCCTGCATGCTGCCT +
Preference number: 2 (lower is better)
Translates to: TIFCLKPSEGSHLSQGDVAWNPT*CPCMLP
Trigger: AGGCAGCATGCAGGGGCAGCAGGTGGGATTCCAGGC...GACATCACCCTGAGAGAGATGGGACCCCTCAGAGGGTTTTAAGCAGAAGATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR-3UTR GCA 90 bp ACTATCTTCTGCTTAAAACCCTCTGAGGGGTCCCATCTCTCTCAGGGTGATGTCCACCTGTCCTGGCATTaGTGTGGCCCCAGGACCCAG +
Preference number: 2 (lower is better)
Translates to: TIFCLKPSEGSHLSQGDVHLSWH*CGPRTQ
Trigger: CTGGGTCCTGGGGCCACAGCAATGCCAGGACAGGTG...GACATCACCCTGAGAGAGATGGGACCCCTCAGAGGGTTTTAAGCAGAAGATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR-3UTR CCA 90 bp ACGGAACCTATTCTGTCAGCAAGAGCCGGGCCTCGAATGAGAGGAAGCAGAGGCCATGTGTGCCTAGAGTaGCAGAGTCCTGGGGTTTTC +
Preference number: 2 (lower is better)
Translates to: TEPILSARAGPRMRGSRGHVCLE*QSPGVF
Trigger: GAAAACCCCAGGACTCTGCCACTCTAGGCACACATG...GCCTCTGCTTCCTCTCATTCGAGGCCCGGCTCTTGCTGACAGAATAGGTTCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR CCA 90 bp ACGGAACCTATTCTGTCAGCAAGAGCCGGGCCTCGAATGAGAGGAAGCAGAGGCTGGTGGGCGAGACCTTaGCCTGAGAACTTTGGTTCA +
Preference number: 2 (lower is better)
Translates to: TEPILSARAGPRMRGSRGWWARP*PENFGS
Trigger: TGAACCAAAGTTCTCAGGCCAAGGTCTCGCCCACCA...GCCTCTGCTTCCTCTCATTCGAGGCCCGGCTCTTGCTGACAGAATAGGTTCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR CCA 90 bp CTGAGGGGTCCCATCTCTCTCAGGGTGATGTCTAGACTTCTTCTGAGGCTAGACCCACAGCAGGCCTGTTaGTGCCTTGCTATGCGAGAC +
Preference number: 2 (lower is better)
Translates to: LRGPISLRVMSRLLLRLDPQQAC*CLAMRD
Trigger: GTCTCGCATAGCAAGGCACCAACAGGCCTGCTGTGG...GTCTAGCCTCAGAAGAAGTCTAGACATCACCCTGAGAGAGATGGGACCCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR-3UTR CCA 90 bp ACTATCTTCTGCTTAAAACCCTCTGAGGGGTCCCATCTCTCTCAGGGTGATGTCTCCAACAGGGCAGCCTaGAATCCCACCTGCTGCCCC +
Preference number: 2 (lower is better)
Translates to: TIFCLKPSEGSHLSQGDVSNRAA*NPTCCP
Trigger: GGGGCAGCAGGTGGGATTCCAGGCTGCCCTGTTGGA...GACATCACCCTGAGAGAGATGGGACCCCTCAGAGGGTTTTAAGCAGAAGATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR CAA 90 bp GGGCGAGACCTTGGCCTGAGAACTTTGGTTCACAGGAAGCTTCCCTaGACAATACTTGAGTGCAAAGCTTCATCCAGGTCCCACCTGGGC +
Preference number: 2 (lower is better)
Translates to: GRDLGLRTLVHRKLP*TILECKASSRSHLG
Trigger: GCCCAGGTGGGACCTGGATGAAGCTTTGCACTCAAGTATTGTCAAGGGAAGCTTCCTGTGAACCAAAGTTCTCAGGCCAAGGTCTCGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR TCA 90 bp TCATTAGCAACTGAACAGAACCCACTCAGAAGACGCACTCACCCACACGTGCGCGGCGAGACCTTGGCCTaGGAACTTTGGTTCACAGGA +
Preference number: 2 (lower is better)
Translates to: SLATEQNPLRRRTHPHVRGETLA*ELWFTG
Trigger: TCCTGTGAACCAAAGTTCTCAGGCCAAGGTCTCGCC...GCGCACGTGTGGGTGAGTGCGTCTTCTGAGTGGGTTCTGTTCAGTTGCTAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR GCA 90 bp CTTCCCTGTGACTTCCAAGAAACGACAAGATCTCTAGCCCATCCATCGGTAAACTGCAGGCCAGCTGGCTaGATCCCCAAGCTCCAGGAC +
Preference number: 2 (lower is better)
Translates to: LPCDFQETTRSLAHPSVNCRPAG*IPKLQD
Trigger: GTCCTGGAGCTTGGGGATGCAGCCAGCTGGCCTGCA...GTTTACCGATGGATGGGCTAGAGATCTTGTCGTTTCTTGGAAGTCACAGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR GCA 90 bp AGAATGAACGCAGGAATGCAAGACAGACCCATCACAACAGCCTGGTACAGCAGCAACACGCAGCGGCAATaGTCGCTGCATAAGCCCTGC +
Preference number: 2 (lower is better)
Translates to: RMNAGMQDRPITTAWYSSNTQRQ*SLHKPC
Trigger: GCAGGGCTTATGCAGCGAGCATTGCCGCTGCGTGTT...GCTGCTGTACCAGGCTGTTGTGATGGGTCTGTCTTGCATTCCTGCGTTCATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR-3UTR CCA 90 bp TCATTAGCAACTGAACAGAACCCACTCAGAAGACGCACTCACCCACACGTGCGCCTGTGGCATGACCTCTaGCTTGCTGACTCAGAACCC +
Preference number: 2 (lower is better)
Translates to: SLATEQNPLRRRTHPHVRLWHDL*LADSEP
Trigger: GGGTTCTGAGTCAGCAAGCCAGAGGTCATGCCACAG...GCGCACGTGTGGGTGAGTGCGTCTTCTGAGTGGGTTCTGTTCAGTTGCTAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR TCA 90 bp AACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCTCCTACCCCCGAAGCCTGGGTTTTCCATACCATaGGTGAAACAGTTCCCCGCA +
Preference number: 2 (lower is better)
Translates to: NTSRKTAEQLQILLPPKPGFSIP*VKQFPA
Trigger: TGCGGGGAACTGTTTCACTCATGGTATGGAAAACCC...AGGCTTCGGGGGTAGGAGGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR TCA 90 bp ACGGAACCTATTCTGTCAGCAAGAGCCGGGCCTCGAATGAGAGGAAGCAGAGGCGCAGAGCTGAATTCTTaGGAAACTGGGGTCTCCAAT +
Preference number: 2 (lower is better)
Translates to: TEPILSARAGPRMRGSRGAELNS*ETGVSN
Trigger: ATTGGAGACCCCAGTTTCTCAAGAATTCAGCTCTGC...GCCTCTGCTTCCTCTCATTCGAGGCCCGGCTCTTGCTGACAGAATAGGTTCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR TCA 90 bp TCATTAGCAACTGAACAGAACCCACTCAGAAGACGCACTCACCCACACGTGCGCCGCTCAGAGCAGAGCTaGATTCTTGAGAAACTGGGG +
Preference number: 2 (lower is better)
Translates to: SLATEQNPLRRRTHPHVRRSEQS*ILEKLG
Trigger: CCCCAGTTTCTCAAGAATTCAGCTCTGCTCTGAGCG...GCGCACGTGTGGGTGAGTGCGTCTTCTGAGTGGGTTCTGTTCAGTTGCTAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR TCA 90 bp AGAATGAACGCAGGAATGCAAGACAGACCCATCACAACAGCCTGGTACAGCAGCCATAAGCCCTGCTGTTaGAGTACACAGCCAGCCCAG +
Preference number: 2 (lower is better)
Translates to: RMNAGMQDRPITTAWYSSHKPCC*STQPAQ
Trigger: CTGGGCTGGCTGTGTACTTCAACAGCAGGGCTTATG...GCTGCTGTACCAGGCTGTTGTGATGGGTCTGTCTTGCATTCCTGCGTTCATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR-3UTR GCA 90 bp ATGATCACACCTGTGAAGATAGCCATTGAATACAGACAGTCTGTGCAACACGGCTGCAGGCCAGCTGGCTaGATCCCCAAGCTCCAGGAC +
Preference number: 2 (lower is better)
Translates to: MITPVKIAIEYRQSVQHGCRPAG*IPKLQD
Trigger: GTCCTGGAGCTTGGGGATGCAGCCAGCTGGCCTGCA...GCCGTGTTGCACAGACTGTCTGTATTCAATGGCTATCTTCACAGGTGTGATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR GCA 90 bp ACGGAACCTATTCTGTCAGCAAGAGCCGGGCCTCGAATGAGAGGAAGCAGAGGCGGCTGTTGCCAAGGATaGTCAAGCGTTCTCTTCAAT +
Preference number: 2 (lower is better)
Translates to: TEPILSARAGPRMRGSRGGCCQG*SSVLFN
Trigger: ATTGAAGAGAACGCTTGAGCATCCTTGGCAACAGCC...GCCTCTGCTTCCTCTCATTCGAGGCCCGGCTCTTGCTGACAGAATAGGTTCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR CCA 90 bp CTGAGGGGTCCCATCTCTCTCAGGGTGATGTCTAGACTTCTTCTGAGGCTAGACCTTGTAAAGCCACTCTaGAACACGCAGCGGCAATGC +
Preference number: 2 (lower is better)
Translates to: LRGPISLRVMSRLLLRLDLVKPL*NTQRQC
Trigger: GCATTGCCGCTGCGTGTTCCAGAGTGGCTTTACAAG...GTCTAGCCTCAGAAGAAGTCTAGACATCACCCTGAGAGAGATGGGACCCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR-3UTR GCA 90 bp AGAATGAACGCAGGAATGCAAGACAGACCCATCACAACAGCCTGGTACAGCAGCAGCGGCAATGCTCGCTaGATAAGCCCTGCTGTTGAA +
Preference number: 2 (lower is better)
Translates to: RMNAGMQDRPITTAWYSSSGNAR*ISPAVE
Trigger: TTCAACAGCAGGGCTTATGCAGCGAGCATTGCCGCT...GCTGCTGTACCAGGCTGTTGTGATGGGTCTGTCTTGCATTCCTGCGTTCATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR-3UTR CCA 90 bp GCCAAGGATGCTCAAGCGTTCTCTTCAATCTTCCCTGTGACTTCCAAGAAACGATTCCAGCCAGGCCTGTaGCATGACCTCTGGCTTGCT +
Preference number: 2 (lower is better)
Translates to: AKDAQAFSSIFPVTSKKRFQPGL*HDLWLA
Trigger: AGCAAGCCAGAGGTCATGCCACAGGCCTGGCTGGAA...TCGTTTCTTGGAAGTCACAGGGAAGATTGAAGAGAACGCTTGAGCATCCTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR TCA 90 bp ACGGAACCTATTCTGTCAGCAAGAGCCGGGCCTCGAATGAGAGGAAGCAGAGGCAGAGTGTTTCAGAAGTaGATGTGGTATGATCACACC +
Preference number: 2 (lower is better)
Translates to: TEPILSARAGPRMRGSRGRVFQK*MWYDHT
Trigger: GGTGTGATCATACCACATTCACTTCTGAAACACTCT...GCCTCTGCTTCCTCTCATTCGAGGCCCGGCTCTTGCTGACAGAATAGGTTCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR TCA 90 bp TTTGGTGGGCGAGACCTTGGCCTGAGAACTTTGGTTCACAGGAAGCTTCCCTTGAGGAGGTCAGAAAGATaGAGGTGCTGCCAAAAACTG +
Preference number: 2 (lower is better)
Translates to: FGGRDLGLRTLVHRKLPLRRSER*RCCQKL
Trigger: CAGTTTTTGGCAGCACCTTCATCTTTCTGACCTCCT...CAAGGGAAGCTTCCTGTGAACCAAAGTTCTCAGGCCAAGGTCTCGCCCACCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR TCA 90 bp AACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCTCCTACCCCCGAAGCCTTCCCTTGACAATACTTaGGTGCAAAGCTTCATCCAG +
Preference number: 2 (lower is better)
Translates to: NTSRKTAEQLQILLPPKPSLDNT*VQSFIQ
Trigger: CTGGATGAAGCTTTGCACTCAAGTATTGTCAAGGGA...AGGCTTCGGGGGTAGGAGGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR CCA 90 bp GACAAGATCTCTAGCCCATCCATCGGTAAACCAAGCTGCCAAGTGGCCTGGAAAAGAGTGGCAGAGTCCTaGGGTTTTCCATACCATGAG +
Preference number: 2 (lower is better)
Translates to: DKISSPSIGKPSCQVAWKRVAES*GFPYHE
Trigger: CTCATGGTATGGAAAACCCCAGGACTCTGCCACTCT...TTTCCAGGCCACTTGGCAGCTTGGTTTACCGATGGATGGGCTAGAGATCTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR CAA 90 bp CTTGCACTTTCTGGCTTTGGTGGGCGAGACCTTGGCCTGAGAACTTaGGTTCACAGGAAGCTTCCCTTGACAATACTTGAGTGCAAAGCT +
Preference number: 2 (lower is better)
Translates to: LALSGFGGRDLGLRT*VHRKLPLTILECKA
Trigger: AGCTTTGCACTCAAGTATTGTCAAGGGAAGCTTCCTGTGAACCAAAGTTCTCAGGCCAAGGTCTCGCCCACCAAAGCCAGAAAGTGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR TCA 90 bp TCATTAGCAACTGAACAGAACCCACTCAGAAGACGCACTCACCCACACGTGCGCTCCCTTGACAATACTTaGGTGCAAAGCTTCATCCAG +
Preference number: 2 (lower is better)
Translates to: SLATEQNPLRRRTHPHVRSLDNT*VQSFIQ
Trigger: CTGGATGAAGCTTTGCACTCAAGTATTGTCAAGGGA...GCGCACGTGTGGGTGAGTGCGTCTTCTGAGTGGGTTCTGTTCAGTTGCTAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR TCA 90 bp CTGAACAGAACCCACTCAGAAGACGCACTCACCCACACGTGCGCGTACACACACAATATACACACACACTaGAGTGATCTCTCCCTAAAG +
Preference number: 2 (lower is better)
Translates to: LNRTHSEDALTHTCAYTHNIHTH*SDLSLK
Trigger: CTTTAGGGAGAGATCACTTCAGTGTGTGTGTATATT...GTGTGTGTACGCGCACGTGTGGGTGAGTGCGTCTTCTGAGTGGGTTCTGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR TCA 90 bp AGCGTAACTGCGATTCACTTAACATACCTTACAGGACTAAGGGAGTACAATTTAGAGCCGGGCCTCGAATaGGAGGAAGCAGAGGCAGCC +
Preference number: 2 (lower is better)
Translates to: SVTAIHLTYLTGLREYNLEPGLE*EEAEAA
Trigger: GGCTGCCTCTGCTTCCTCTCATTCGAGGCCCGGCTC...TAAATTGTACTCCCTTAGTCCTGTAAGGTATGTTAAGTGAATCGCAGTTACGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR CCA 90 bp GCCAAGGATGCTCAAGCGTTCTCTTCAATCTTCCCTGTGACTTCCAAGAAACGAAGAGTGGCAGAGTCCTaGGGTTTTCCATACCATGAG +
Preference number: 2 (lower is better)
Translates to: AKDAQAFSSIFPVTSKKRRVAES*GFPYHE
Trigger: CTCATGGTATGGAAAACCCCAGGACTCTGCCACTCT...TCGTTTCTTGGAAGTCACAGGGAAGATTGAAGAGAACGCTTGAGCATCCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR CCA 90 bp AATTCCATGAAGAACACGGCTCTTAGAAACCTCATTCCAAATCTCAACACGCCATTCCAGCCAGGCCTGTaGCATGACCTCTGGCTTGCT +
Preference number: 2 (lower is better)
Translates to: NSMKNTALRNLIPNLNTPFQPGL*HDLWLA
Trigger: AGCAAGCCAGAGGTCATGCCACAGGCCTGGCTGGAA...TGGCGTGTTGAGATTTGGAATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR CAA 90 bp TCCAAATCTCAACACGCCACGTTCAGCCCAAGTTCAGCTTGTGCATaGTGTTTTGGAATTGGGACACGAGTATCTATAGTCCCTTGCTGG +
Preference number: 2 (lower is better)
Translates to: SKSQHATFSPSSACA*CFGIGTRVSIVPCW
Trigger: CCAGCAAGGGACTATAGATACTCGTGTCCCAATTCCAAAACACAATGCACAAGCTGAACTTGGGCTGAACGTGGCGTGTTGAGATTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR TCA 90 bp AAGAGGCAGCAGAGAGAGAGCCAGGACTGGTTAAATGCAGAAAGTGGTTTTGTTGGGTTTTCCATACCATaGGTGAAACAGTTCCCCGCA +
Preference number: 2 (lower is better)
Translates to: KRQQRESQDWLNAESGFVGFSIP*VKQFPA
Trigger: TGCGGGGAACTGTTTCACTCATGGTATGGAAAACCC...AACAAAACCACTTTCTGCATTTAACCAGTCCTGGCTCTCTCTCTGCTGCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR TCA 90 bp AGAACACGGCTCTTAGAAACCTCATTCCAAATCTCAACACGCCACGTTCAGCCCAAGAAACTGGAGGGCTaGGTTTGGAGTAAAGGAGAA +
Preference number: 2 (lower is better)
Translates to: RTRLLETSFQISTRHVQPKKLEG*VWSKGE
Trigger: TTCTCCTTTACTCCAAACTCAGCCCTCCAGTTTCTT...GGGCTGAACGTGGCGTGTTGAGATTTGGAATGAGGTTTCTAAGAGCCGTGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR TCA 90 bp AGTGGCAAGAATGAACGCAGGAATGCAAGACAGACCCATCACAACAGCCTGGTAGCTCTTAAGACAATTTaGGAGTTGGGTGTCCTCATG +
Preference number: 2 (lower is better)
Translates to: SGKNERRNARQTHHNSLVALKTI*ELGVLM
Trigger: CATGAGGACACCCAACTCTCAAATTGTCTTAAGAGC...TACCAGGCTGTTGTGATGGGTCTGTCTTGCATTCCTGCGTTCATTCTTGCCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR-3UTR GCA 90 bp AACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCTCCTACCCCCGAAGCCTCCAGGACTGGTTAAATaGAGAAAGTGGTTTTGTTTT +
Preference number: 2 (lower is better)
Translates to: NTSRKTAEQLQILLPPKPPGLVK*RKWFCF
Trigger: AAAACAAAACCACTTTCTGCATTTAACCAGTCCTGG...AGGCTTCGGGGGTAGGAGGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR TCA 90 bp CTTCCCTGTGACTTCCAAGAAACGACAAGATCTCTAGCCCATCCATCGGTAAACTTTCCATACCATGAGTaGAACAGTTCCCCGCAAAGA +
Preference number: 2 (lower is better)
Translates to: LPCDFQETTRSLAHPSVNFPYHE*NSSPQR
Trigger: TCTTTGCGGGGAACTGTTTCACTCATGGTATGGAAA...GTTTACCGATGGATGGGCTAGAGATCTTGTCGTTTCTTGGAAGTCACAGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR TCA 90 bp CTTCCCTGTGACTTCCAAGAAACGACAAGATCTCTAGCCCATCCATCGGTAAACAAGAAACTGGAGGGCTaGGTTTGGAGTAAAGGAGAA +
Preference number: 2 (lower is better)
Translates to: LPCDFQETTRSLAHPSVNKKLEG*VWSKGE
Trigger: TTCTCCTTTACTCCAAACTCAGCCCTCCAGTTTCTT...GTTTACCGATGGATGGGCTAGAGATCTTGTCGTTTCTTGGAAGTCACAGGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR TCA 90 bp ATTCCAAATCTCAACACGCCACGTTCAGCCCAAGTTCAGCTTGTGCATTGTGTTAACAGGGTTTACATCTaGAGAAACTGGAGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: IPNLNTPRSAQVQLVHCVNRVYI*RNWRAE
Trigger: CTCAGCCCTCCAGTTTCTTCAGATGTAAACCCTGTT...AACACAATGCACAAGCTGAACTTGGGCTGAACGTGGCGTGTTGAGATTTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR TCA 90 bp ATTCCAAATCTCAACACGCCACGTTCAGCCCAAGTTCAGCTTGTGCATTGTGTTAGGAGGTCAGAAAGATaGAGGTGCTGCCAAAAACTG +
Preference number: 2 (lower is better)
Translates to: IPNLNTPRSAQVQLVHCVRRSER*RCCQKL
Trigger: CAGTTTTTGGCAGCACCTTCATCTTTCTGACCTCCT...AACACAATGCACAAGCTGAACTTGGGCTGAACGTGGCGTGTTGAGATTTGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR CCA 90 bp CTGCCAAGTGGCCTGGAAAATTCCATGAAGAACACGGCTCTTAGAAACCTCATTTCTATAGTCCCTTGCTaGGTGAGGAACTTTGACCAC +
Preference number: 2 (lower is better)
Translates to: LPSGLENSMKNTALRNLISIVPC*VRNFDH
Trigger: GTGGTCAAAGTTCCTCACCCAGCAAGGGACTATAGA...AATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATTTTCCAGGCCACTTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR CCA 90 bp ATTCCAAATCTCAACACGCCACGTTCAGCCCAAGTTCAGCTTGTGCATTGTGTTAGAGAGAGCCAGGACTaGTTAAATGCAGAAAGTGGT +
Preference number: 2 (lower is better)
Translates to: IPNLNTPRSAQVQLVHCVRESQD*LNAESG
Trigger: ACCACTTTCTGCATTTAACCAGTCCTGGCTCTCTCT...AACACAATGCACAAGCTGAACTTGGGCTGAACGTGGCGTGTTGAGATTTGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR CCA 90 bp AGCGTAACTGCGATTCACTTAACATACCTTACAGGACTAAGGGAGTACAATTTATGCACTTTCTGGCTTTaGTGGGCGAGACCTTGGCCT +
Preference number: 2 (lower is better)
Translates to: SVTAIHLTYLTGLREYNLCTFWL*WARPWP
Trigger: AGGCCAAGGTCTCGCCCACCAAAGCCAGAAAGTGCA...TAAATTGTACTCCCTTAGTCCTGTAAGGTATGTTAAGTGAATCGCAGTTACGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR TCA 90 bp TTTGGAATTGGGACACGAGTATCTATAGTCCCTTGCTGGGTGAGGAACTTTGACAAGTGTTCAATTCCTTaGGGTTGCTCATTCTGGCAT +
Preference number: 2 (lower is better)
Translates to: FGIGTRVSIVPCWVRNFDKCSIP*GCSFWH
Trigger: ATGCCAGAATGAGCAACCTCAAGGAATTGAACACTT...GTCAAAGTTCCTCACCCAGCAAGGGACTATAGATACTCGTGTCCCAATTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR CCA 90 bp ACTTCTGTAAGAAGCAGAATTACACCACATGTTATTCACATGCATAGGAGTGCAGAATTCTTGAGAAACTaGGGTCTCCAATGGCCTCGG +
Preference number: 2 (lower is better)
Translates to: TSVRSRITPHVIHMHRSAEFLRN*GLQWPR
Trigger: CCGAGGCCATTGGAGACCCCAGTTTCTCAAGAATTC...TGCACTCCTATGCATGTGAATAACATGTGGTGTAATTCTGCTTCTTACAGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR TCA 90 bp AATTCCATGAAGAACACGGCTCTTAGAAACCTCATTCCAAATCTCAACACGCCAAGAGTGTTTCAGAAGTaGATGTGGTATGATCACACC +
Preference number: 2 (lower is better)
Translates to: NSMKNTALRNLIPNLNTPRVFQK*MWYDHT
Trigger: GGTGTGATCATACCACATTCACTTCTGAAACACTCT...TGGCGTGTTGAGATTTGGAATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR TCA 90 bp TCCAATTATAAACTGAAGTTCTTGAGAAAACGTATGAAGAGGCAGCAGAGAGAGTTTCCATACCATGAGTaGAACAGTTCCCCGCAAAGA +
Preference number: 2 (lower is better)
Translates to: SNYKLKFLRKRMKRQQREFPYHE*NSSPQR
Trigger: TCTTTGCGGGGAACTGTTTCACTCATGGTATGGAAA...CTCTCTCTGCTGCCTCTTCATACGTTTTCTCAAGAACTTCAGTTTATAATTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR TCA 90 bp AGCGTAACTGCGATTCACTTAACATACCTTACAGGACTAAGGGAGTACAATTTACTTCAATCTTCCCTGTaGCTTCCAAGAAACGACAAG +
Preference number: 2 (lower is better)
Translates to: SVTAIHLTYLTGLREYNLLQSSL*LPRNDK
Trigger: CTTGTCGTTTCTTGGAAGTCACAGGGAAGATTGAAG...TAAATTGTACTCCCTTAGTCCTGTAAGGTATGTTAAGTGAATCGCAGTTACGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR TCA 90 bp AGCGTAACTGCGATTCACTTAACATACCTTACAGGACTAAGGGAGTACAATTTAACAGGAAGCTTCCCTTaGCAATACTTGAGTGCAAAG +
Preference number: 2 (lower is better)
Translates to: SVTAIHLTYLTGLREYNLTGSFP*QYLSAK
Trigger: CTTTGCACTCAAGTATTGTCAAGGGAAGCTTCCTGT...TAAATTGTACTCCCTTAGTCCTGTAAGGTATGTTAAGTGAATCGCAGTTACGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR GCA 90 bp ACTTCTGTAAGAAGCAGAATTACACCACATGTTATTCACATGCATAGGAGTGCAGTATCTATAGTCCCTTaGTGGGTGAGGAACTTTGAC +
Preference number: 2 (lower is better)
Translates to: TSVRSRITPHVIHMHRSAVSIVP*WVRNFD
Trigger: GTCAAAGTTCCTCACCCAGCAAGGGACTATAGATAC...TGCACTCCTATGCATGTGAATAACATGTGGTGTAATTCTGCTTCTTACAGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR GCA 90 bp ACTTCTGTAAGAAGCAGAATTACACCACATGTTATTCACATGCATAGGAGTGCAGTTATAATTCATGTGTaGCTAGAGTGGCAGAGTCCT +
Preference number: 2 (lower is better)
Translates to: TSVRSRITPHVIHMHRSAVIIHV*LEWQSP
Trigger: AGGACTCTGCCACTCTAGGCACACATGAATTATAAC...TGCACTCCTATGCATGTGAATAACATGTGGTGTAATTCTGCTTCTTACAGAAGT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR GCA 90 bp ACTTCTGTAAGAAGCAGAATTACACCACATGTTATTCACATGCATAGGAGTGCATTGACAATACTTGAGTaGAAAGCTTCATCCAGGTCC +
Preference number: 2 (lower is better)
Translates to: TSVRSRITPHVIHMHRSALTILE*KASSRS
Trigger: GGACCTGGATGAAGCTTTGCACTCAAGTATTGTCAA...TGCACTCCTATGCATGTGAATAACATGTGGTGTAATTCTGCTTCTTACAGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR GCA 72 bp TGCACAGGAAGGCAAGGACCACACCTGTCCTGGCATTaGTGTGGCCCCAGGACCCAGCGTCATGCAGGGGAC +
Preference number: 3 (lower is better)
Translates to: CTGRQGPHLSWH*CGPRTQRHAGD
Trigger: GTCCCCTGCATGACGCTGGGTCCTGGGGCCACAGCAATGCCAGGACAGGTGTGGTCCTTGCCTTCCTGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR CCA 72 bp GCCAGCTGCACAGGAAGGCAAGGACCACACCTGTCCTaGCATTGCTGTGGCCCCAGGACCCAGCGTCATGCA +
Preference number: 3 (lower is better)
Translates to: ASCTGRQGPHLS*HCCGPRTQRHA
Trigger: TGCATGACGCTGGGTCCTGGGGCCACAGCAATGCCAGGACAGGTGTGGTCCTTGCCTTCCTGTGCAGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR GCA 72 bp AGGTGTTCTCTCCACACCCAGTGCAGGCCAGCTGGCTaGATCCCCAAGCTCCAGGACGCTCAGAGCAGAGCT +
Preference number: 3 (lower is better)
Translates to: RCSLHTQCRPAG*IPKLQDAQSRA
Trigger: AGCTCTGCTCTGAGCGTCCTGGAGCTTGGGGATGCAGCCAGCTGGCCTGCACTGGGTGTGGAGAGAACACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR GCA 72 bp ACTACAAAGTCCAACAGGGCAGCCTGGAATCCCACCTaGTGCCCCTGCATGCTGCCTCCCAGATCCCACGGC +
Preference number: 3 (lower is better)
Translates to: TTKSNRAAWNPT*CPCMLPPRSHG
Trigger: GCCGTGGGATCTGGGAGGCAGCATGCAGGGGCAGCAGGTGGGATTCCAGGCTGCCCTGTTGGACTTTGTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR TCA 72 bp ACGCAGCGGCAATGCTCGCTGCATAAGCCCTGCTGTTaGAGTACACAGCCAGCCCAGGGAGCCCAGCATGGA +
Preference number: 3 (lower is better)
Translates to: TQRQCSLHKPCC*STQPAQGAQHG
Trigger: TCCATGCTGGGCTCCCTGGGCTGGCTGTGTACTTCAACAGCAGGGCTTATGCAGCGAGCATTGCCGCTGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR GCA 72 bp AAAACAGCCCTGGCCATCCTGGCGCTCAGAGCCCTCTaGACACCTTCGAACGGGCTGTGTGTCCCTTCTCTG +
Preference number: 3 (lower is better)
Translates to: KTALAILALRAL*TPSNGLCVPSL
Trigger: CAGAGAAGGGACACACAGCCCGTTCGAAGGTGTGCAGAGGGCTCTGAGCGCCAGGATGGCCAGGGCTGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR CCA 72 bp CACCTGGGGGCTTCCAAGACTCCACAGCAGGCCTGTTaGTGCCTTGCTATGCGAGACGCTGAGCAGAGCAAG +
Preference number: 3 (lower is better)
Translates to: HLGASKTPQQAC*CLAMRDAEQSK
Trigger: CTTGCTCTGCTCAGCGTCTCGCATAGCAAGGCACCAACAGGCCTGCTGTGGAGTCTTGGAAGCCCCCAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR-3UTR CAA 90 bp TGCACACGCTGCTCTCAGTTCCCTGGCCAACTCTCCTTCAGGCCTCAGCACAGAAGGCCTGTTGGTGCCTaGCTATGCGAGACGCTGAGC +
Preference number: 3 (lower is better)
Translates to: CTRCSQFPGQLSFRPQHRRPVGA*LCETLS
Trigger: GCTCAGCGTCTCGCATAGCAAGGCACCAACAGGCCT...TCTGTGCTGAGGCCTGAAGGAGAGTTGGCCAGGGAACTGAGAGCAGCGTGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR-3UTR CAA 90 bp TCATTAGCAACTGAACAGAACCCACTCAGAAGACGCACTCACCCACACGTGCGCCTGATGATGACGGCATaGGCGGGCCCAGCACGTGCA +
Preference number: 3 (lower is better)
Translates to: SLATEQNPLRRRTHPHVRLMMTA*AGPARA
Trigger: TGCACGTGCTGGGCCCGCCAATGCCGTCATCATCAG...GCGCACGTGTGGGTGAGTGCGTCTTCTGAGTGGGTTCTGTTCAGTTGCTAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR GCA 72 bp TCCCTAAAGCATCCTTGTGCTCAGGCCAGATTTCCCTaGTGGCGGCTGCTCCCAGTGCCGGCTATAGAGAAG +
Preference number: 3 (lower is better)
Translates to: SLKHPCAQARFP*WRLLPVPAIEK
Trigger: CTTCTCTATAGCCGGCACTGGGAGCAGCCGCCAGCAGGGAAATCTGGCCTGAGCACAAGGATGCTTTAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR GCA 72 bp GTCCTGGCATTGCTGTGGCCCCAGGACCCAGCGTCATaGAGGGGACATAGTGGCAAGAATGAACGCAGGAAT +
Preference number: 3 (lower is better)
Translates to: VLALLWPQDPAS*RGHSGKNERRN
Trigger: ATTCCTGCGTTCATTCTTGCCACTATGTCCCCTGCATGACGCTGGGTCCTGGGGCCACAGCAATGCCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR CCA 72 bp CTAAAGCATCCTTGTGCTCAGGCCAGATTTCCCTGCTaGCGGCTGCTCCCAGTGCCGGCTATAGAGAAGGTG +
Preference number: 3 (lower is better)
Translates to: LKHPCAQARFPC*RLLPVPAIEKV
Trigger: CACCTTCTCTATAGCCGGCACTGGGAGCAGCCGCCAGCAGGGAAATCTGGCCTGAGCACAAGGATGCTTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR CCA 72 bp GAGACGCTGAGCAGAGCAAGGCTTGTAAAGCCACTCTaGAACACGCAGCGGCAATGCTCGCTGCATAAGCCC +
Preference number: 3 (lower is better)
Translates to: ETLSRARLVKPL*NTQRQCSLHKP
Trigger: GGGCTTATGCAGCGAGCATTGCCGCTGCGTGTTCCAGAGTGGCTTTACAAGCCTTGCTCTGCTCAGCGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR GCA 72 bp CCAAGACTCCACAGCAGGCCTGTTGGTGCCTTGCTATaGGAGACGCTGAGCAGAGCAAGGCTTGTAAAGCCA +
Preference number: 3 (lower is better)
Translates to: PRLHSRPVGALL*ETLSRARLVKP
Trigger: TGGCTTTACAAGCCTTGCTCTGCTCAGCGTCTCGCATAGCAAGGCACCAACAGGCCTGCTGTGGAGTCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR-3UTR CAA 90 bp ACGGAACCTATTCTGTCAGCAAGAGCCGGGCCTCGAATGAGAGGAAGCAGAGGCCATGTCTGGATGGCATaGAGTGGCACAGAAGGGATG +
Preference number: 3 (lower is better)
Translates to: TEPILSARAGPRMRGSRGHVWMA*SGTEGM
Trigger: CATCCCTTCTGTGCCACTCAATGCCATCCAGACATG...GCCTCTGCTTCCTCTCATTCGAGGCCCGGCTCTTGCTGACAGAATAGGTTCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR TCA 72 bp CTGATGGCAGAAAGACAACACCAGCAGAAAGACGGCTaGACAACTGCAGATCCTCCTACCCCCGAAGCCTGG +
Preference number: 3 (lower is better)
Translates to: LMAERQHQQKDG*TTADPPTPEAW
Trigger: CCAGGCTTCGGGGGTAGGAGGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTTGTCTTTCTGCCATCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR TCA 72 bp GGGTTGTGTCCAGAGCGGAGGAGCCTCATTAGCAACTaGACAGAACCCACTCAGAAGACGCACTCACCCACA +
Preference number: 3 (lower is better)
Translates to: GLCPERRSLISN*TEPTQKTHSPT
Trigger: TGTGGGTGAGTGCGTCTTCTGAGTGGGTTCTGTTCAGTTGCTAATGAGGCTCCTCCGCTCTGGACACAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR CCA 72 bp GCCGGCTATAGAGAAGGTGGGGACTGTCCCTGCAAGTaGGAGTTCAGGACACACGCTCCTTCAGTAGCAAAA +
Preference number: 3 (lower is better)
Translates to: AGYREGGDCPCK*EFRTHAPSVAK
Trigger: TTTTGCTACTGAAGGAGCGTGTGTCCTGAACTCCCACTTGCAGGGACAGTCCCCACCTTCTCTATAGCCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR GCA 72 bp GCTTCATCCAGGTCCCACCTGGGCTGTTGCCAAGGATaGTCAAGCGTTCTCTTCAATCTTCCCTGTGACTTC +
Preference number: 3 (lower is better)
Translates to: ASSRSHLGCCQG*SSVLFNLPCDF
Trigger: GAAGTCACAGGGAAGATTGAAGAGAACGCTTGAGCATCCTTGGCAACAGCCCAGGTGGGACCTGGATGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR GCA 72 bp GAGTGCAAAGCTTCATCCAGGTCCCACCTGGGCTGTTaGCAAGGATGCTCAAGCGTTCTCTTCAATCTTCCC +
Preference number: 3 (lower is better)
Translates to: ECKASSRSHLGC*QGCSSVLFNLP
Trigger: GGGAAGATTGAAGAGAACGCTTGAGCATCCTTGGCAACAGCCCAGGTGGGACCTGGATGAAGCTTTGCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR GCA 72 bp AGAAAGACAACACCAGCAGAAAGACGGCTGAACAACTaGAGATCCTCCTACCCCCGAAGCCTGGTCTGTCTC +
Preference number: 3 (lower is better)
Translates to: RKTTPAERRLNN*RSSYPRSLVCL
Trigger: GAGACAGACCAGGCTTCGGGGGTAGGAGGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTTGTCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR CCA 72 bp CAGGACGCTCAGAGCAGAGCTGAATTCTTGAGAAACTaGGGTCTCCAATGGCCTCGGATAGAGGAGCTCTGT +
Preference number: 3 (lower is better)
Translates to: QDAQSRAEFLRN*GLQWPRIEELC
Trigger: ACAGAGCTCCTCTATCCGAGGCCATTGGAGACCCCAGTTTCTCAAGAATTCAGCTCTGCTCTGAGCGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR CCA 72 bp GGTGCTTGCACTTTCTGGCTTTGGTGGGCGAGACCTTaGCCTGAGAACTTTGGTTCACAGGAAGCTTCCCTT +
Preference number: 3 (lower is better)
Translates to: GACTFWLWWARP*PENFGSQEASL
Trigger: AAGGGAAGCTTCCTGTGAACCAAAGTTCTCAGGCCAAGGTCTCGCCCACCAAAGCCAGAAAGTGCAAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR CCA 72 bp AATGGCCAAGCTGGAAACCTGACCCACACCAATGGCTaGTTCCAAAGTGTACTCCTCCTACCTGGCACCAGA +
Preference number: 3 (lower is better)
Translates to: NGQAGNLTHTNG*FQSVLLLPGTR
Trigger: TCTGGTGCCAGGTAGGAGGAGTACACTTTGGAACCAGCCATTGGTGTGGGTCAGGTTTCCAGCTTGGCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR CCA 72 bp AGCAAATGGCCAAGCTGGAAACCTGACCCACACCAATaGCTGGTTCCAAAGTGTACTCCTCCTACCTGGCAC +
Preference number: 3 (lower is better)
Translates to: SKWPSWKPDPHQ*LVPKCTPPTWH
Trigger: GTGCCAGGTAGGAGGAGTACACTTTGGAACCAGCCATTGGTGTGGGTCAGGTTTCCAGCTTGGCCATTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR-3UTR CAA 90 bp TTTGGAATTGGGACACGAGTATCTATAGTCCCTTGCTGGGTGAGGAACTTTGACCTGATGATGACGGCATaGGCGGGCCCAGCACGTGCA +
Preference number: 3 (lower is better)
Translates to: FGIGTRVSIVPCWVRNFDLMMTA*AGPARA
Trigger: TGCACGTGCTGGGCCCGCCAATGCCGTCATCATCAG...GTCAAAGTTCCTCACCCAGCAAGGGACTATAGATACTCGTGTCCCAATTCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR CAA 90 bp TCATTAGCAACTGAACAGAACCCACTCAGAAGACGCACTCACCCACACGTGCGCTCTGTGAGGGGTCCATaGCTGAGCTCTCGAACATCA +
Preference number: 3 (lower is better)
Translates to: SLATEQNPLRRRTHPHVRSVRGP*LSSRTS
Trigger: TGATGTTCGAGAGCTCAGCAATGGACCCCTCACAGA...GCGCACGTGTGGGTGAGTGCGTCTTCTGAGTGGGTTCTGTTCAGTTGCTAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR CCA 72 bp AGCAGAGCTGAATTCTTGAGAAACTGGGGTCTCCAATaGCCTCGGATAGAGGAGCTCTGTGAGGGGTCCATT +
Preference number: 3 (lower is better)
Translates to: SRAEFLRNWGLQ*PRIEELCEGSI
Trigger: AATGGACCCCTCACAGAGCTCCTCTATCCGAGGCCATTGGAGACCCCAGTTTCTCAAGAATTCAGCTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR CAA 90 bp TCCCACCACCTGGGGGCTTCCAAGACTCCACAGCAGGCCTGTTGGTGCCTTGCTGAACAAGAGATACGATaGAGGAATCAACAGAAAATG +
Preference number: 3 (lower is better)
Translates to: SHHLGASKTPQQACWCLAEQEIR*RNQQKM
Trigger: CATTTTCTGTTGATTCCTCAATCGTATCTCTTGTTC...AGCAAGGCACCAACAGGCCTGCTGTGGAGTCTTGGAAGCCCCCAGGTGGTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR-3UTR CAA 90 bp TTTGGTGGGCGAGACCTTGGCCTGAGAACTTTGGTTCACAGGAAGCTTCCCTTGAGCAGAGCTGAATTCTaGAGAAACTGGGGTCTCCAA +
Preference number: 3 (lower is better)
Translates to: FGGRDLGLRTLVHRKLPLSRAEF*RNWGLQ
Trigger: TTGGAGACCCCAGTTTCTCAAGAATTCAGCTCTGCT...CAAGGGAAGCTTCCTGTGAACCAAAGTTCTCAGGCCAAGGTCTCGCCCACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR CAA 90 bp AACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCTCCTACCCCCGAAGCCTCAGCCCAAGTTCAGCTaGTGCATTGTGTTTTGGAAT +
Preference number: 3 (lower is better)
Translates to: NTSRKTAEQLQILLPPKPQPKFS*CIVFWN
Trigger: ATTCCAAAACACAATGCACAAGCTGAACTTGGGCTG...AGGCTTCGGGGGTAGGAGGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR GCA 72 bp TTGGTTCACAGGAAGCTTCCCTTGACAATACTTGAGTaGAAAGCTTCATCCAGGTCCCACCTGGGCTGTTGC +
Preference number: 3 (lower is better)
Translates to: LVHRKLPLTILE*KASSRSHLGCC
Trigger: GCAACAGCCCAGGTGGGACCTGGATGAAGCTTTGCACTCAAGTATTGTCAAGGGAAGCTTCCTGTGAACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR TCA 72 bp AACTTTGGTTCACAGGAAGCTTCCCTTGACAATACTTaGGTGCAAAGCTTCATCCAGGTCCCACCTGGGCTG +
Preference number: 3 (lower is better)
Translates to: NFGSQEASLDNT*VQSFIQVPPGL
Trigger: CAGCCCAGGTGGGACCTGGATGAAGCTTTGCACTCAAGTATTGTCAAGGGAAGCTTCCTGTGAACCAAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR TCA 72 bp AGGCCCCTGGAGGGAAAAACCATGTCTGGATGGCATTaGGTGGCACAGAAGGGATGGGACTGCATATATAAA +
Preference number: 3 (lower is better)
Translates to: RPLEGKTMSGWH*VAQKGWDCIYK
Trigger: TTTATATATGCAGTCCCATCCCTTCTGTGCCACTCAATGCCATCCAGACATGGTTTTTCCCTCCAGGGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR GCA 72 bp TGTTTTGGAATTGGGACACGAGTATCTATAGTCCCTTaGTGGGTGAGGAACTTTGACCACACGCAGTGGAGA +
Preference number: 3 (lower is better)
Translates to: CFGIGTRVSIVP*WVRNFDHTQWR
Trigger: TCTCCACTGCGTGTGGTCAAAGTTCCTCACCCAGCAAGGGACTATAGATACTCGTGTCCCAATTCCAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR CCA 72 bp TTTGGAATTGGGACACGAGTATCTATAGTCCCTTGCTaGGTGAGGAACTTTGACCACACGCAGTGGAGAATG +
Preference number: 3 (lower is better)
Translates to: FGIGTRVSIVPC*VRNFDHTQWRM
Trigger: CATTCTCCACTGCGTGTGGTCAAAGTTCCTCACCCAGCAAGGGACTATAGATACTCGTGTCCCAATTCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR CCA 72 bp CAGCCCAAGTTCAGCTTGTGCATTGTGTTTTGGAATTaGGACACGAGTATCTATAGTCCCTTGCTGGGTGAG +
Preference number: 3 (lower is better)
Translates to: QPKFSLCIVFWN*DTSIYSPLLGE
Trigger: CTCACCCAGCAAGGGACTATAGATACTCGTGTCCCAATTCCAAAACACAATGCACAAGCTGAACTTGGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR CAA 90 bp TCTGATGGCAGAAAGACAACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCGAAGTGTTCAATTCCTaGAGGTTGCTCATTCTGGCA +
Preference number: 3 (lower is better)
Translates to: SDGRKTTPAERRLNNCRSEVFNS*RLLILA
Trigger: TGCCAGAATGAGCAACCTCAAGGAATTGAACACTTC...GGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTTGTCTTTCTGCCATCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR CAA 90 bp TCTGATGGCAGAAAGACAACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCAGTTCAGCTTGTGCATaGTGTTTTGGAATTGGGACA +
Preference number: 3 (lower is better)
Translates to: SDGRKTTPAERRLNNCRSSSACA*CFGIGT
Trigger: TGTCCCAATTCCAAAACACAATGCACAAGCTGAACT...GGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTTGTCTTTCTGCCATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR TCA 72 bp CCATTGTATGACAAAGCAACTGAGTCTCAGAAAGGCTaGGACAACTGCCTAGAGTCACAGAGCCAGCAAATG +
Preference number: 3 (lower is better)
Translates to: PLYDKATESQKG*DNCLESQSQQM
Trigger: CATTTGCTGGCTCTGTGACTCTAGGCAGTTGTCTCAGCCTTTCTGAGACTCAGTTGCTTTGTCATACAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR CCA 72 bp CACGTTCAGCCCAAGTTCAGCTTGTGCATTGTGTTTTaGAATTGGGACACGAGTATCTATAGTCCCTTGCTG +
Preference number: 3 (lower is better)
Translates to: HVQPKFSLCIVF*NWDTSIYSPLL
Trigger: CAGCAAGGGACTATAGATACTCGTGTCCCAATTCCAAAACACAATGCACAAGCTGAACTTGGGCTGAACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR CCA 72 bp CCGCTCAAGAGAATGCTCTTAAGACAATTTGAGAGTTaGGTGTCCTCATGTCTGCCGATTCTAATTGCTGGG +
Preference number: 3 (lower is better)
Translates to: PLKRMLLRQFES*VSSCLPILIAG
Trigger: CCCAGCAATTAGAATCGGCAGACATGAGGACACCCAACTCTCAAATTGTCTTAAGAGCATTCTCTTGAGCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR CCA 72 bp AACGCAGGAATGCAAGACAGACCCATCACAACAGCCTaGTACAGCAGCATTATTACCCCATTGTATGACAAA +
Preference number: 3 (lower is better)
Translates to: NAGMQDRPITTA*YSSIITPLYDK
Trigger: TTTGTCATACAATGGGGTAATAATGCTGCTGTACCAGGCTGTTGTGATGGGTCTGTCTTGCATTCCTGCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR-3UTR CAA 90 bp GCCAAGGATGCTCAAGCGTTCTCTTCAATCTTCCCTGTGACTTCCAAGAAACGAAAACCTGATGAGGGCTaGAATTACCTAGATTTTCCA +
Preference number: 3 (lower is better)
Translates to: AKDAQAFSSIFPVTSKKRKPDEG*NYLDFP
Trigger: TGGAAAATCTAGGTAATTCAAGCCCTCATCAGGTTT...TCGTTTCTTGGAAGTCACAGGGAAGATTGAAGAGAACGCTTGAGCATCCTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR CAA 90 bp AGCGTAACTGCGATTCACTTAACATACCTTACAGGACTAAGGGAGTACAATTTACTCCCTAAAGCATCCTaGTGCTCAGGCCAGATTTCC +
Preference number: 3 (lower is better)
Translates to: SVTAIHLTYLTGLREYNLLPKAS*CSGQIS
Trigger: GGAAATCTGGCCTGAGCACAAGGATGCTTTAGGGAG...TAAATTGTACTCCCTTAGTCCTGTAAGGTATGTTAAGTGAATCGCAGTTACGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR TCA 72 bp ACGAGTATCTATAGTCCCTTGCTGGGTGAGGAACTTTaGCCACACGCAGTGGAGAATGTGGAAATAAACTAT +
Preference number: 3 (lower is better)
Translates to: TSIYSPLLGEEL*PHAVENVEINY
Trigger: ATAGTTTATTTCCACATTCTCCACTGCGTGTGGTCAAAGTTCCTCACCCAGCAAGGGACTATAGATACTCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR GCA 72 bp GAACTTCAATACCATGTTGTGAGAAATGCTCCAATTTaGTTTGGTTTTGAATGGCAGGCTCGAGAACCACCG +
Preference number: 3 (lower is better)
Translates to: ELQYHVVRNAPI*FGFEWQAREPP
Trigger: CGGTGGTTCTCGAGCCTGCCATTCAAAACCAAAGCAAATTGGAGCATTTCTCACAACATGGTATTGAAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR CAA 90 bp AAACCATGTCTGGATGGCATTGAGTGGCACAGAAGGGATGGGACTGCATATATAAAACCTGATGAGGGCTaGAATTACCTAGATTTTCCA +
Preference number: 3 (lower is better)
Translates to: KPCLDGIEWHRRDGTAYIKPDEG*NYLDFP
Trigger: TGGAAAATCTAGGTAATTCAAGCCCTCATCAGGTTT...TATATATGCAGTCCCATCCCTTCTGTGCCACTCAATGCCATCCAGACATGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR CAA 90 bp TCCAATTATAAACTGAAGTTCTTGAGAAAACGTATGAAGAGGCAGCAGAGAGAGAGCAGAGCTGAATTCTaGAGAAACTGGGGTCTCCAA +
Preference number: 3 (lower is better)
Translates to: SNYKLKFLRKRMKRQQRESRAEF*RNWGLQ
Trigger: TTGGAGACCCCAGTTTCTCAAGAATTCAGCTCTGCT...CTCTCTCTGCTGCCTCTTCATACGTTTTCTCAAGAACTTCAGTTTATAATTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR CAA 90 bp ACTTCTGTAAGAAGCAGAATTACACCACATGTTATTCACATGCATAGGAGTGCATTCAATTCCTTGAGGTaGCTCATTCTGGCATTAACA +
Preference number: 3 (lower is better)
Translates to: TSVRSRITPHVIHMHRSAFNSLR*LILALT
Trigger: TGTTAATGCCAGAATGAGCAACCTCAAGGAATTGAA...TGCACTCCTATGCATGTGAATAACATGTGGTGTAATTCTGCTTCTTACAGAAGT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR-3UTR CAA 90 bp AGCGTAACTGCGATTCACTTAACATACCTTACAGGACTAAGGGAGTACAATTTATTCAATTCCTTGAGGTaGCTCATTCTGGCATTAACA +
Preference number: 3 (lower is better)
Translates to: SVTAIHLTYLTGLREYNLFNSLR*LILALT
Trigger: TGTTAATGCCAGAATGAGCAACCTCAAGGAATTGAA...TAAATTGTACTCCCTTAGTCCTGTAAGGTATGTTAAGTGAATCGCAGTTACGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp AGCTGCACAGGAAGGCAAGGACCACACCTGTCCTGGCATTGCTGTGGCCCCAGGCAGCGCAGGCGGAAGTaGTTCCCGTGCGCGTGCGCC +
Preference number: 4 (lower is better)
Translates to: SCTGRQGPHLSWHCCGPRQRRRK*FPCACA
Trigger: GGCGCACGCGCACGGGAAGCACTTCCGCCTGCGCTG...CCTGGGGCCACAGCAATGCCAGGACAGGTGTGGTCCTTGCCTTCCTGTGCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CCA 90 bp TCCCACCACCTGGGGGCTTCCAAGACTCCACAGCAGGCCTGTTGGTGCCTTGCTTGCGCGTGCGCCAGGTaGCCCCAGAAGGCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: SHHLGASKTPQQACWCLACACAR*PQKALR
Trigger: GCGCAAGGCCTTCTGGGGCCACCTGGCGCACGCGCA...AGCAAGGCACCAACAGGCCTGCTGTGGAGTCTTGGAAGCCCCCAGGTGGTGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp AGGCGGCTGGCTGCGTTCTGTATGGTAGGTGGTGCTGACCACTGGGCCTCTGCATGCTTCCCGTGCGCGTaGGCCAGGTGGCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: RRLAAFCMVGGADHWASACFPCA*ARWPQK
Trigger: CTTCTGGGGCCACCTGGCGCACGCGCACGGGAAGCA...TGCAGAGGCCCAGTGGTCAGCACCACCTACCATACAGAACGCAGCCAGCCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp TGCTCTCAGTTCCCTGGCCAACTCTCCTTCAGGCCTCAGCACAGACATTCCCTCCGCGCGGCTCAGAGCTaGCTCGCTCGGCTCGCCGCA +
Preference number: 4 (lower is better)
Translates to: CSQFPGQLSFRPQHRHSLRAAQS*LARLAA
Trigger: TGCGGCGAGCCGAGCGAGGCAGCTCTGAGCCGCGCG...GAGGGAATGTCTGTGCTGAGGCCTGAAGGAGAGTTGGCCAGGGAACTGAGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp AGGCGGCTGGCTGCGTTCTGTATGGTAGGTGGTGCTGACCACTGGGCCTCTGCAGCCAGTGCCCTGGGCTaGTGGCTTACCGAGCCATGG +
Preference number: 4 (lower is better)
Translates to: RRLAAFCMVGGADHWASAASALG*WLTEPW
Trigger: CCATGGCTCGGTAAGCCAGCAGCCCAGGGCACTGGC...TGCAGAGGCCCAGTGGTCAGCACCACCTACCATACAGAACGCAGCCAGCCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp CCCAGATCCCACGGCCTCTGTAGTAAGAAAGAGGGGGCAGAGCCTCTTGGCCTGGGCCCCAGAAGGCCTTaGGCAGGGCGTCGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: PRSHGLCSKKEGAEPLGLGPRRP*AGRRRW
Trigger: CCACCTTCGACGCCCTGCGCAAGGCCTTCTGGGGCC...CAGGCCAAGAGGCTCTGCCCCCTCTTTCTTACTACAGAGGCCGTGGGATCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR TCA 90 bp CCAGCTGCACAGGAAGGCAAGGACCACACCTGTCCTGGCATTGCTGTGGCCCCACTGGCCTGCAGTCCTTaGTGGATCTGGTGTGCGGCC +
Preference number: 4 (lower is better)
Translates to: PAAQEGKDHTCPGIAVAPLACSP*WIWCAA
Trigger: GGCCGCACACCAGATCCATCAAGGACTGCAGGCCAG...TGGGGCCACAGCAATGCCAGGACAGGTGTGGTCCTTGCCTTCCTGTGCAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp CTGAACAGAACCCACTCAGAAGACGCACTCACCCACACGTGCGCGTACACACACCAGCGCAGGCGGAAGTaGTTCCCGTGCGCGTGCGCC +
Preference number: 4 (lower is better)
Translates to: LNRTHSEDALTHTCAYTHQRRRK*FPCACA
Trigger: GGCGCACGCGCACGGGAAGCACTTCCGCCTGCGCTG...GTGTGTGTACGCGCACGTGTGGGTGAGTGCGTCTTCTGAGTGGGTTCTGTTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp GGCAATGCTCGCTGCATAAGCCCTGCTGTTGAAGTACACAGCCAGCCCAGGGAGGCTGCCCCTGCATGCTaGCTCCCAGATCCCACGGCC +
Preference number: 4 (lower is better)
Translates to: GNARCISPAVEVHSQPREAAPAC*LPDPTA
Trigger: GGCCGTGGGATCTGGGAGGCAGCATGCAGGGGCAGC...CTCCCTGGGCTGGCTGTGTACTTCAACAGCAGGGCTTATGCAGCGAGCATTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp TCCCACCACCTGGGGGCTTCCAAGACTCCACAGCAGGCCTGTTGGTGCCTTGCTGCCTGGAATCCCACCTaGTGCCCCTGCATGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SHHLGASKTPQQACWCLAAWNPT*CPCMLP
Trigger: AGGCAGCATGCAGGGGCAGCAGGTGGGATTCCAGGC...AGCAAGGCACCAACAGGCCTGCTGTGGAGTCTTGGAAGCCCCCAGGTGGTGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR TCA 90 bp TGCACACGCTGCTCTCAGTTCCCTGGCCAACTCTCCTTCAGGCCTCAGCACAGACAGAGCCTCTTGGCCTaGAGTCCCACCACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: CTRCSQFPGQLSFRPQHRQSLLA*SPTTWG
Trigger: CCCCCAGGTGGTGGGACTTCAGGCCAAGAGGCTCTG...TCTGTGCTGAGGCCTGAAGGAGAGTTGGCCAGGGAACTGAGAGCAGCGTGTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp ACGGAACCTATTCTGTCAGCAAGAGCCGGGCCTCGAATGAGAGGAAGCAGAGGCTGCTTCCCGTGCGCGTaGGCCAGGTGGCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: TEPILSARAGPRMRGSRGCFPCA*ARWPQK
Trigger: CTTCTGGGGCCACCTGGCGCACGCGCACGGGAAGCA...GCCTCTGCTTCCTCTCATTCGAGGCCCGGCTCTTGCTGACAGAATAGGTTCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp GGCAATGCTCGCTGCATAAGCCCTGCTGTTGAAGTACACAGCCAGCCCAGGGAGCAAACCAGCTCCTTCTaGCAGGGGCCAGCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: GNARCISPAVEVHSQPREQTSSF*QGPARG
Trigger: CCCCCGAGCTGGCCCCTGGCAGAAGGAGCTGGTTTG...CTCCCTGGGCTGGCTGTGTACTTCAACAGCAGGGCTTATGCAGCGAGCATTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CCA 90 bp CTCCATCTTCTCTCCCCGCCAGCTGCACAGGAAGGCAAGGACCACACCTGTCCTAGTGCCCTGGGCTGCTaGCTTACCGAGCCATGGGTG +
Preference number: 4 (lower is better)
Translates to: LHLLSPPAAQEGKDHTCPSALGC*LTEPWV
Trigger: CACCCATGGCTCGGTAAGCCAGCAGCCCAGGGCACT...AGGACAGGTGTGGTCCTTGCCTTCCTGTGCAGCTGGCGGGGAGAGAAGATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CCA 90 bp AGCTGCACAGGAAGGCAAGGACCACACCTGTCCTGGCATTGCTGTGGCCCCAGGCGCTGTCCATCAAGCTaGGGTTGCTGGGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: SCTGRQGPHLSWHCCGPRRCPSS*GCWGSL
Trigger: GAGGCTTCCCCAGCAACCCCAGCTTGATGGACAGCG...CCTGGGGCCACAGCAATGCCAGGACAGGTGTGGTCCTTGCCTTCCTGTGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CCA 90 bp TCCCACCACCTGGGGGCTTCCAAGACTCCACAGCAGGCCTGTTGGTGCCTTGCTTCTCAGGTGGTTCTCTaGTGGCCAGAGCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SHHLGASKTPQQACWCLASQVVL*WPELPA
Trigger: GGCAGGGAGCTCTGGCCACCAGAGAACCACCTGAGA...AGCAAGGCACCAACAGGCCTGCTGTGGAGTCTTGGAAGCCCCCAGGTGGTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp CTCCATCTTCTCTCCCCGCCAGCTGCACAGGAAGGCAAGGACCACACCTGTCCTTGGCAGTTGACCTGCTaGTTGTGTGCGCCGTCGGGT +
Preference number: 4 (lower is better)
Translates to: LHLLSPPAAQEGKDHTCPWQLTC*LCAPSG
Trigger: ACCCGACGGCGCACACAAGCAGCAGGTCAACTGCCA...AGGACAGGTGTGGTCCTTGCCTTCCTGTGCAGCTGGCGGGGAGAGAAGATGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp CTCCATCTTCTCTCCCCGCCAGCTGCACAGGAAGGCAAGGACCACACCTGTCCTGGGTCGGTGGTGTTCTaGCCCGAGAACTCCTCGTAC +
Preference number: 4 (lower is better)
Translates to: LHLLSPPAAQEGKDHTCPGSVVF*PENSSY
Trigger: GTACGAGGAGTTCTCGGGGCAGAACACCACCGACCC...AGGACAGGTGTGGTCCTTGCCTTCCTGTGCAGCTGGCGGGGAGAGAAGATGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp AACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCTCCTACCCCCGAAGCCTGGCCCCAGAAGGCCTTaGGCAGGGCGTCGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: NTSRKTAEQLQILLPPKPGPRRP*AGRRRW
Trigger: CCACCTTCGACGCCCTGCGCAAGGCCTTCTGGGGCC...AGGCTTCGGGGGTAGGAGGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp TTTGGTGGGCGAGACCTTGGCCTGAGAACTTTGGTTCACAGGAAGCTTCCCTTGCGGAAGTGCTTCCCGTaGGCGTGCGCCAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: FGGRDLGLRTLVHRKLPLRKCFP*ACARWP
Trigger: GGGCCACCTGGCGCACGCGCACGGGAAGCACTTCCG...CAAGGGAAGCTTCCTGTGAACCAAAGTTCTCAGGCCAAGGTCTCGCCCACCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp TCATTAGCAACTGAACAGAACCCACTCAGAAGACGCACTCACCCACACGTGCGCCAGCGCAGGCGGAAGTaGTTCCCGTGCGCGTGCGCC +
Preference number: 4 (lower is better)
Translates to: SLATEQNPLRRRTHPHVRQRRRK*FPCACA
Trigger: GGCGCACGCGCACGGGAAGCACTTCCGCCTGCGCTG...GCGCACGTGTGGGTGAGTGCGTCTTCTGAGTGGGTTCTGTTCAGTTGCTAATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp AGCTGCACAGGAAGGCAAGGACCACACCTGTCCTGGCATTGCTGTGGCCCCAGGGCGTGGATGAAGTCCTaGGTCAGAAACGGTGGCTCG +
Preference number: 4 (lower is better)
Translates to: SCTGRQGPHLSWHCCGPRAWMKS*VRNGGS
Trigger: CGAGCCACCGTTTCTGACGCAGGACTTCATCCACGC...CCTGGGGCCACAGCAATGCCAGGACAGGTGTGGTCCTTGCCTTCCTGTGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp CTCCATCTTCTCTCCCCGCCAGCTGCACAGGAAGGCAAGGACCACACCTGTCCTTCTCTCCCCGCCAGCTaGACAGGAAGGCAAGGACCA +
Preference number: 4 (lower is better)
Translates to: LHLLSPPAAQEGKDHTCPSLPAS*TGRQGP
Trigger: TGGTCCTTGCCTTCCTGTGCAGCTGGCGGGGAGAGA...AGGACAGGTGTGGTCCTTGCCTTCCTGTGCAGCTGGCGGGGAGAGAAGATGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CCA 90 bp GGCAATGCTCGCTGCATAAGCCCTGCTGTTGAAGTACACAGCCAGCCCAGGGAGGCAGGGCGTCGAAGGTaGAGCGGAAGCGCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: GNARCISPAVEVHSQPREAGRRR*SGSAWS
Trigger: ACTCCAAGCGCTTCCGCTCCACCTTCGACGCCCTGC...CTCCCTGGGCTGGCTGTGTACTTCAACAGCAGGGCTTATGCAGCGAGCATTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CCA 90 bp CTCCATCTTCTCTCCCCGCCAGCTGCACAGGAAGGCAAGGACCACACCTGTCCTAGCCCCGTTCTCAGGTaGTTCTCTGGTGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LHLLSPPAAQEGKDHTCPSPVLR*FSGGQS
Trigger: GCTCTGGCCACCAGAGAACCACCTGAGAACGGGGCT...AGGACAGGTGTGGTCCTTGCCTTCCTGTGCAGCTGGCGGGGAGAGAAGATGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR TCA 90 bp CCAGCTGCACAGGAAGGCAAGGACCACACCTGTCCTGGCATTGCTGTGGCCCCACATAAGCCCTGCTGTTaGAGTACACAGCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: PAAQEGKDHTCPGIAVAPHKPCC*STQPAQ
Trigger: CTGGGCTGGCTGTGTACTTCAACAGCAGGGCTTATG...TGGGGCCACAGCAATGCCAGGACAGGTGTGGTCCTTGCCTTCCTGTGCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp CCAGCTGCACAGGAAGGCAAGGACCACACCTGTCCTGGCATTGCTGTGGCCCCAGTGGCTCGCCATCCGTaGTGTTGTCGTAGAAGAACG +
Preference number: 4 (lower is better)
Translates to: PAAQEGKDHTCPGIAVAPVARHP*CCRRRT
Trigger: CGTTCTTCTACGACAACAGCACGGATGGCGAGCCAC...TGGGGCCACAGCAATGCCAGGACAGGTGTGGTCCTTGCCTTCCTGTGCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp TGGCCTCGGATAGAGGAGCTCTGTGAGGGGTCCATTGCTGAGCTCTCGAACATCGTCCTCGGGACGCCGTaGATTGGATGCGGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: WPRIEELCEGSIAELSNIVLGTP*IGCGAL
Trigger: AAGAGCCCCGCATCCAATGCACGGCGTCCCGAGGAC...GATGTTCGAGAGCTCAGCAATGGACCCCTCACAGAGCTCCTCTATCCGAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp AGCTGCACAGGAAGGCAAGGACCACACCTGTCCTGGCATTGCTGTGGCCCCAGGTGGAGCGGAAGCGCTTaGAGTAGAGCACGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: SCTGRQGPHLSWHCCGPRWSGSA*SRARRS
Trigger: ACTCCTACGTGCTCTACTCCAAGCGCTTCCGCTCCA...CCTGGGGCCACAGCAATGCCAGGACAGGTGTGGTCCTTGCCTTCCTGTGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CCA 90 bp GACAAGATCTCTAGCCCATCCATCGGTAAACCAAGCTGCCAAGTGGCCTGGAAATGCGCGTGCGCCAGGTaGCCCCAGAAGGCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: DKISSPSIGKPSCQVAWKCACAR*PQKALR
Trigger: GCGCAAGGCCTTCTGGGGCCACCTGGCGCACGCGCA...TTTCCAGGCCACTTGGCAGCTTGGTTTACCGATGGATGGGCTAGAGATCTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp TGCTCTCAGTTCCCTGGCCAACTCTCCTTCAGGCCTCAGCACAGACATTCCCTCGTCCTGGCATTGCTGTaGCCCCAGGACCCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: CSQFPGQLSFRPQHRHSLVLALL*PQDPAS
Trigger: TGACGCTGGGTCCTGGGGCCACAGCAATGCCAGGAC...GAGGGAATGTCTGTGCTGAGGCCTGAAGGAGAGTTGGCCAGGGAACTGAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR TCA 90 bp AACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCTCCTACCCCCGAAGCCTCTGGCCTGCAGTCCTTaGTGGATCTGGTGTGCGGCC +
Preference number: 4 (lower is better)
Translates to: NTSRKTAEQLQILLPPKPLACSP*WIWCAA
Trigger: GGCCGCACACCAGATCCATCAAGGACTGCAGGCCAG...AGGCTTCGGGGGTAGGAGGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp CCCCGCAAAGAGATTTGTAAAATCCTGATGATGACGGCATTGGCGGGCCCAGCAGAGCCGGGCCTCGAATaGGAGGAAGCAGAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PRKEICKILMMTALAGPAEPGLE*EEAEAA
Trigger: GGCTGCCTCTGCTTCCTCTCATTCGAGGCCCGGCTC...TGCTGGGCCCGCCAATGCCGTCATCATCAGGATTTTACAAATCTCTTTGCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp CTGAACAGAACCCACTCAGAAGACGCACTCACCCACACGTGCGCGTACACACACCCTTGGCAGTTGACCTaGTGCTTGTGTGCGCCGTCG +
Preference number: 4 (lower is better)
Translates to: LNRTHSEDALTHTCAYTHPWQLT*CLCAPS
Trigger: CGACGGCGCACACAAGCAGCAGGTCAACTGCCAAGG...GTGTGTGTACGCGCACGTGTGGGTGAGTGCGTCTTCTGAGTGGGTTCTGTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp GTTCCAAAGTGTACTCCTCCTACCTGGCACCAGAGCAGGCTCTGGGGTTACCTGCCTTGGCAGTTGACCTaGTGCTTGTGTGCGCCGTCG +
Preference number: 4 (lower is better)
Translates to: VPKCTPPTWHQSRLWGYLPWQLT*CLCAPS
Trigger: CGACGGCGCACACAAGCAGCAGGTCAACTGCCAAGG...CAGGTAACCCCAGAGCCTGCTCTGGTGCCAGGTAGGAGGAGTACACTTTGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp ACTATCTTCTGCTTAAAACCCTCTGAGGGGTCCCATCTCTCTCAGGGTGATGTCCGGAAGTGCTTCCCGTaGGCGTGCGCCAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: TIFCLKPSEGSHLSQGDVRKCFP*ACARWP
Trigger: GGGCCACCTGGCGCACGCGCACGGGAAGCACTTCCG...GACATCACCCTGAGAGAGATGGGACCCCTCAGAGGGTTTTAAGCAGAAGATAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CCA 90 bp TGCTCTCAGTTCCCTGGCCAACTCTCCTTCAGGCCTCAGCACAGACATTCCCTCCCGGGTCCACCAGTGTaGCTCCTTGATGGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: CSQFPGQLSFRPQHRHSLPGPPV*LLDGGE
Trigger: TTCTCCGCCATCAAGGAGCCACACTGGTGGACCCGG...GAGGGAATGTCTGTGCTGAGGCCTGAAGGAGAGTTGGCCAGGGAACTGAGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CCA 90 bp ACCCACACCAATGGCTGGTTCCAAAGTGTACTCCTCCTACCTGGCACCAGAGCATCCAACAGGGCAGCCTaGAATCCCACCTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: THTNGWFQSVLLLPGTRASNRAA*NPTCCP
Trigger: GGGGCAGCAGGTGGGATTCCAGGCTGCCCTGTTGGA...TGCTCTGGTGCCAGGTAGGAGGAGTACACTTTGGAACCAGCCATTGGTGTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CCA 90 bp GGCAATGCTCGCTGCATAAGCCCTGCTGTTGAAGTACACAGCCAGCCCAGGGAGCTGCTCTCAGTTCCCTaGCCAACTCTCCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: GNARCISPAVEVHSQPRELLSVP*PTLLQA
Trigger: GGCCTGAAGGAGAGTTGGCCAGGGAACTGAGAGCAG...CTCCCTGGGCTGGCTGTGTACTTCAACAGCAGGGCTTATGCAGCGAGCATTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR TCA 90 bp GCCAGCAAATGGCCAAGCTGGAAACCTGACCCACACCAATGGCTGGTTCCAAAGGCACGTAGGAGTTGGTaGGGTAGGGGTCGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: ASKWPSWKPDPHQWLVPKARRSW*GRGRWC
Trigger: ACACCACCGACCCCTACCTCACCAACTCCTACGTGC...CTTTGGAACCAGCCATTGGTGTGGGTCAGGTTTCCAGCTTGGCCATTTGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp AGAACACGGCTCTTAGAAACCTCATTCCAAATCTCAACACGCCACGTTCAGCCCGGCCCCAGAAGGCCTTaGGCAGGGCGTCGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: RTRLLETSFQISTRHVQPGPRRP*AGRRRW
Trigger: CCACCTTCGACGCCCTGCGCAAGGCCTTCTGGGGCC...GGGCTGAACGTGGCGTGTTGAGATTTGGAATGAGGTTTCTAAGAGCCGTGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp CCCCGCAAAGAGATTTGTAAAATCCTGATGATGACGGCATTGGCGGGCCCAGCAGCGCTCAGAGCCCTCTaGACACCTTCGAACGGGCTG +
Preference number: 4 (lower is better)
Translates to: PRKEICKILMMTALAGPAALRAL*TPSNGL
Trigger: CAGCCCGTTCGAAGGTGTGCAGAGGGCTCTGAGCGC...TGCTGGGCCCGCCAATGCCGTCATCATCAGGATTTTACAAATCTCTTTGCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp CTGAGGGGTCCCATCTCTCTCAGGGTGATGTCTAGACTTCTTCTGAGGCTAGACCACCTGTCCTGGCATTaGTGTGGCCCCAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: LRGPISLRVMSRLLLRLDHLSWH*CGPRTQ
Trigger: CTGGGTCCTGGGGCCACAGCAATGCCAGGACAGGTG...GTCTAGCCTCAGAAGAAGTCTAGACATCACCCTGAGAGAGATGGGACCCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp CTGGCCAACTCTCCTTCAGGCCTCAGCACAGACATTCCCTCTCCTAAGAACCTGGGCCTCTGCACACGCTaGTCTCAGTTCCCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: LANSPSGLSTDIPSPKNLGLCTR*SQFPGQ
Trigger: TTGGCCAGGGAACTGAGAGCAGCGTGTGCAGAGGCC...CAGGTTCTTAGGAGAGGGAATGTCTGTGCTGAGGCCTGAAGGAGAGTTGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CCA 90 bp TTTGGTGGGCGAGACCTTGGCCTGAGAACTTTGGTTCACAGGAAGCTTCCCTTGGTAGTGCCAGTGCCCTaGGCTGCTGGCTTACCGAGC +
Preference number: 4 (lower is better)
Translates to: FGGRDLGLRTLVHRKLPLVVPVP*AAGLPS
Trigger: GCTCGGTAAGCCAGCAGCCCAGGGCACTGGCACTAC...CAAGGGAAGCTTCCTGTGAACCAAAGTTCTCAGGCCAAGGTCTCGCCCACCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp AACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCTCCTACCCCCGAAGCCTGGTCATAGAGGTCTGTaGTCCCGCACTTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: NTSRKTAEQLQILLPPKPGHRGL*SRTWAA
Trigger: GGCAGCCCAAGTGCGGGACCACAGACCTCTATGACC...AGGCTTCGGGGGTAGGAGGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp ACGGAACCTATTCTGTCAGCAAGAGCCGGGCCTCGAATGAGAGGAAGCAGAGGCTTCCAGCCAGGCCTGTaGCATGACCTCTGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: TEPILSARAGPRMRGSRGFQPGL*HDLWLA
Trigger: AGCAAGCCAGAGGTCATGCCACAGGCCTGGCTGGAA...GCCTCTGCTTCCTCTCATTCGAGGCCCGGCTCTTGCTGACAGAATAGGTTCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp CTCCATCTTCTCTCCCCGCCAGCTGCACAGGAAGGCAAGGACCACACCTGTCCTCACAGAGCCAGCAAATaGCCAAGCTGGAAACCTGAC +
Preference number: 4 (lower is better)
Translates to: LHLLSPPAAQEGKDHTCPHRASK*PSWKPD
Trigger: GTCAGGTTTCCAGCTTGGCCATTTGCTGGCTCTGTG...AGGACAGGTGTGGTCCTTGCCTTCCTGTGCAGCTGGCGGGGAGAGAAGATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR TCA 90 bp TGCTCTCAGTTCCCTGGCCAACTCTCCTTCAGGCCTCAGCACAGACATTCCCTCGCTGAAAGGCGTGGATaGAGTCCTGCGTCAGAAACG +
Preference number: 4 (lower is better)
Translates to: CSQFPGQLSFRPQHRHSLAERRG*SPASET
Trigger: CGTTTCTGACGCAGGACTTCATCCACGCCTTTCAGC...GAGGGAATGTCTGTGCTGAGGCCTGAAGGAGAGTTGGCCAGGGAACTGAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR TCA 90 bp ATTCCAAATCTCAACACGCCACGTTCAGCCCAAGTTCAGCTTGTGCATTGTGTTCAGGGCGCGTCAACCTaGCTCCCCGAGCGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: IPNLNTPRSAQVQLVHCVQGAST*LPERWE
Trigger: CTCCCAGCGCTCGGGGAGTCAGGTTGACGCGCCCTG...AACACAATGCACAAGCTGAACTTGGGCTGAACGTGGCGTGTTGAGATTTGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435907.6
CDS-3UTR GCA 90 bp AGAACACGGCTCTTAGAAACCTCATTCCAAATCTCAACACGCCACGTTCAGCCCGCCAGTGCCCTGGGCTaGTGGCTTACCGAGCCATGG +
Preference number: 4 (lower is better)
Translates to: RTRLLETSFQISTRHVQPASALG*WLTEPW
Trigger: CCATGGCTCGGTAAGCCAGCAGCCCAGGGCACTGGC...GGGCTGAACGTGGCGTGTTGAGATTTGGAATGAGGTTTCTAAGAGCCGTGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp GCCAGCAAATGGCCAAGCTGGAAACCTGACCCACACCAATGGCTGGTTCCAAAGCTTGCTCTGCTCCTTTaGAGAGCTGGCCTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: ASKWPSWKPDPHQWLVPKLALLL*RAGLQS
Trigger: GGACTGCAGGCCAGCTCTGCAAAGGAGCAGAGCAAG...CTTTGGAACCAGCCATTGGTGTGGGTCAGGTTTCCAGCTTGGCCATTTGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp TGGCCTCGGATAGAGGAGCTCTGTGAGGGGTCCATTGCTGAGCTCTCGAACATCGTGGCTCGCCATCCGTaGTGTTGTCGTAGAAGAACG +
Preference number: 4 (lower is better)
Translates to: WPRIEELCEGSIAELSNIVARHP*CCRRRT
Trigger: CGTTCTTCTACGACAACAGCACGGATGGCGAGCCAC...GATGTTCGAGAGCTCAGCAATGGACCCCTCACAGAGCTCCTCTATCCGAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp AACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCTCCTACCCCCGAAGCCTGCGTGGATGAAGTCCTaGGTCAGAAACGGTGGCTCG +
Preference number: 4 (lower is better)
Translates to: NTSRKTAEQLQILLPPKPAWMKS*VRNGGS
Trigger: CGAGCCACCGTTTCTGACGCAGGACTTCATCCACGC...AGGCTTCGGGGGTAGGAGGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp TGGCCTCGGATAGAGGAGCTCTGTGAGGGGTCCATTGCTGAGCTCTCGAACATCACGCCGTGCATTGGATaGGGGGCTCTTGGTCATCAA +
Preference number: 4 (lower is better)
Translates to: WPRIEELCEGSIAELSNITPCIG*GALGHQ
Trigger: TTGATGACCAAGAGCCCCGCATCCAATGCACGGCGT...GATGTTCGAGAGCTCAGCAATGGACCCCTCACAGAGCTCCTCTATCCGAGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp TTTGGTGGGCGAGACCTTGGCCTGAGAACTTTGGTTCACAGGAAGCTTCCCTTGTCATCCGCGAGGACCTaGGCCAGCCTAGCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: FGGRDLGLRTLVHRKLPLSSART*ASLALK
Trigger: CTTCAACGCTAGGCTGGCGCAGGTCCTCGCGGATGA...CAAGGGAAGCTTCCTGTGAACCAAAGTTCTCAGGCCAAGGTCTCGCCCACCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp GACAAGATCTCTAGCCCATCCATCGGTAAACCAAGCTGCCAAGTGGCCTGGAAACAGGCCAGATTTCCCTaGTGGCGGCTGCTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: DKISSPSIGKPSCQVAWKQARFP*WRLLPV
Trigger: CACTGGGAGCAGCCGCCAGCAGGGAAATCTGGCCTG...TTTCCAGGCCACTTGGCAGCTTGGTTTACCGATGGATGGGCTAGAGATCTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp TGCTCTCAGTTCCCTGGCCAACTCTCCTTCAGGCCTCAGCACAGACATTCCCTCGTTGGTGCCTTGCTATaGGAGACGCTGAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: CSQFPGQLSFRPQHRHSLVGALL*ETLSRA
Trigger: TGCTCTGCTCAGCGTCTCGCATAGCAAGGCACCAAC...GAGGGAATGTCTGTGCTGAGGCCTGAAGGAGAGTTGGCCAGGGAACTGAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CCA 90 bp AAGAGGCAGCAGAGAGAGAGCCAGGACTGGTTAAATGCAGAAAGTGGTTTTGTTTGCGCGTGCGCCAGGTaGCCCCAGAAGGCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: KRQQRESQDWLNAESGFVCACAR*PQKALR
Trigger: GCGCAAGGCCTTCTGGGGCCACCTGGCGCACGCGCA...AACAAAACCACTTTCTGCATTTAACCAGTCCTGGCTCTCTCTCTGCTGCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp TTTGGTGGGCGAGACCTTGGCCTGAGAACTTTGGTTCACAGGAAGCTTCCCTTGCCGGGTCCACCAGTGTaGCTCCTTGATGGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: FGGRDLGLRTLVHRKLPLPGPPV*LLDGGE
Trigger: TTCTCCGCCATCAAGGAGCCACACTGGTGGACCCGG...CAAGGGAAGCTTCCTGTGAACCAAAGTTCTCAGGCCAAGGTCTCGCCCACCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp TGGCCTCGGATAGAGGAGCTCTGTGAGGGGTCCATTGCTGAGCTCTCGAACATCACTTTCTGGCTTTGGTaGGCGAGACCTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: WPRIEELCEGSIAELSNITFWLW*ARPWPE
Trigger: CTCAGGCCAAGGTCTCGCCCACCAAAGCCAGAAAGT...GATGTTCGAGAGCTCAGCAATGGACCCCTCACAGAGCTCCTCTATCCGAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp CTGAACAGAACCCACTCAGAAGACGCACTCACCCACACGTGCGCGTACACACACTGCACTTTCTGGCTTTaGTGGGCGAGACCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LNRTHSEDALTHTCAYTHCTFWL*WARPWP
Trigger: AGGCCAAGGTCTCGCCCACCAAAGCCAGAAAGTGCA...GTGTGTGTACGCGCACGTGTGGGTGAGTGCGTCTTCTGAGTGGGTTCTGTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp AGAACACGGCTCTTAGAAACCTCATTCCAAATCTCAACACGCCACGTTCAGCCCGCCAGATTTCCCTGCTaGCGGCTGCTCCCAGTGCCG +
Preference number: 4 (lower is better)
Translates to: RTRLLETSFQISTRHVQPARFPC*RLLPVP
Trigger: CGGCACTGGGAGCAGCCGCCAGCAGGGAAATCTGGC...GGGCTGAACGTGGCGTGTTGAGATTTGGAATGAGGTTTCTAAGAGCCGTGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp CTTCCAAGACTCCACAGCAGGCCTGTTGGTGCCTTGCTATGCGAGACGCTGAGCCTTGTAAAGCCACTCTaGAACACGCAGCGGCAATGC +
Preference number: 4 (lower is better)
Translates to: LPRLHSRPVGALLCETLSLVKPL*NTQRQC
Trigger: GCATTGCCGCTGCGTGTTCCAGAGTGGCTTTACAAG...GCTCAGCGTCTCGCATAGCAAGGCACCAACAGGCCTGCTGTGGAGTCTTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CCA 90 bp AACTCTCCTTCAGGCCTCAGCACAGACATTCCCTCTCCTAAGAACCTGCCTGAAGGTGGTGCTGACCACTaGGCCTCTGCACACGCTGCT +
Preference number: 4 (lower is better)
Translates to: NSPSGLSTDIPSPKNLPEGGADH*ASAHAA
Trigger: AGCAGCGTGTGCAGAGGCCCAGTGGTCAGCACCACC...TTCAGGCAGGTTCTTAGGAGAGGGAATGTCTGTGCTGAGGCCTGAAGGAGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR TCA 90 bp GACAAGATCTCTAGCCCATCCATCGGTAAACCAAGCTGCCAAGTGGCCTGGAAAGCACGTAGGAGTTGGTaGGGTAGGGGTCGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: DKISSPSIGKPSCQVAWKARRSW*GRGRWC
Trigger: ACACCACCGACCCCTACCTCACCAACTCCTACGTGC...TTTCCAGGCCACTTGGCAGCTTGGTTTACCGATGGATGGGCTAGAGATCTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp GGCAATGCTCGCTGCATAAGCCCTGCTGTTGAAGTACACAGCCAGCCCAGGGAGGACGCAGGCGCGCAGTaGATAATCAAGCATGCAATT +
Preference number: 4 (lower is better)
Translates to: GNARCISPAVEVHSQPREDAGAQ*IIKHAI
Trigger: AATTGCATGCTTGATTATTCACTGCGCGCCTGCGTC...CTCCCTGGGCTGGCTGTGTACTTCAACAGCAGGGCTTATGCAGCGAGCATTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR TCA 90 bp CTGGCCAACTCTCCTTCAGGCCTCAGCACAGACATTCCCTCTCCTAAGAACCTGCAGGCATGGCGTTGTTaGGGGTGTTGTTGTAGACGC +
Preference number: 4 (lower is better)
Translates to: LANSPSGLSTDIPSPKNLQAWRC*GCCCRR
Trigger: GCGTCTACAACAACACCCTCAACAACGCCATGCCTG...CAGGTTCTTAGGAGAGGGAATGTCTGTGCTGAGGCCTGAAGGAGAGTTGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR TCA 90 bp TGGCCTCGGATAGAGGAGCTCTGTGAGGGGTCCATTGCTGAGCTCTCGAACATCCTGGGTGAGGAACTTTaGCCACACGCAGTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: WPRIEELCEGSIAELSNILGEEL*PHAVEN
Trigger: ATTCTCCACTGCGTGTGGTCAAAGTTCCTCACCCAG...GATGTTCGAGAGCTCAGCAATGGACCCCTCACAGAGCTCCTCTATCCGAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp GCCAAGGATGCTCAAGCGTTCTCTTCAATCTTCCCTGTGACTTCCAAGAAACGAGAGCCGGGCCTCGAATaGGAGGAAGCAGAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: AKDAQAFSSIFPVTSKKREPGLE*EEAEAA
Trigger: GGCTGCCTCTGCTTCCTCTCATTCGAGGCCCGGCTC...TCGTTTCTTGGAAGTCACAGGGAAGATTGAAGAGAACGCTTGAGCATCCTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp TGGAAACCTGACCCACACCAATGGCTGGTTCCAAAGTGTACTCCTCCTACCTGGGCCAAGCTGGAAACCTaGCCCACACCAATGGCTGGT +
Preference number: 4 (lower is better)
Translates to: WKPDPHQWLVPKCTPPTWAKLET*PTPMAG
Trigger: ACCAGCCATTGGTGTGGGTCAGGTTTCCAGCTTGGC...CCAGGTAGGAGGAGTACACTTTGGAACCAGCCATTGGTGTGGGTCAGGTTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp GTTCCAAAGTGTACTCCTCCTACCTGGCACCAGAGCAGGCTCTGGGGTTACCTGATGGATGGATTGCCATaGCATCCACGGAGGCATCTG +
Preference number: 4 (lower is better)
Translates to: VPKCTPPTWHQSRLWGYLMDGLP*HPRRHL
Trigger: CAGATGCCTCCGTGGATGGCATGGCAATCCATCCAT...CAGGTAACCCCAGAGCCTGCTCTGGTGCCAGGTAGGAGGAGTACACTTTGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp GCCAAGGATGCTCAAGCGTTCTCTTCAATCTTCCCTGTGACTTCCAAGAAACGAGCCAGTGCCCTGGGCTaGTGGCTTACCGAGCCATGG +
Preference number: 4 (lower is better)
Translates to: AKDAQAFSSIFPVTSKKRASALG*WLTEPW
Trigger: CCATGGCTCGGTAAGCCAGCAGCCCAGGGCACTGGC...TCGTTTCTTGGAAGTCACAGGGAAGATTGAAGAGAACGCTTGAGCATCCTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp GACAAGATCTCTAGCCCATCCATCGGTAAACCAAGCTGCCAAGTGGCCTGGAAACCTTGGCAGTTGACCTaGTGCTTGTGTGCGCCGTCG +
Preference number: 4 (lower is better)
Translates to: DKISSPSIGKPSCQVAWKPWQLT*CLCAPS
Trigger: CGACGGCGCACACAAGCAGCAGGTCAACTGCCAAGG...TTTCCAGGCCACTTGGCAGCTTGGTTTACCGATGGATGGGCTAGAGATCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp AGTCCCACCACCTGGGGGCTTCCAAGACTCCACAGCAGGCCTGTTGGTGCCTTGGCAAGCAAGTTCATCTaGTTACTGTCCACACGAAAC +
Preference number: 4 (lower is better)
Translates to: SPTTWGLPRLHSRPVGALASKFI*LLSTRN
Trigger: GTTTCGTGTGGACAGTAAGCAGATGAACTTGCTTGC...CAAGGCACCAACAGGCCTGCTGTGGAGTCTTGGAAGCCCCCAGGTGGTGGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp CCCCGCAAAGAGATTTGTAAAATCCTGATGATGACGGCATTGGCGGGCCCAGCAGCGTGGATGAAGTCCTaGGTCAGAAACGGTGGCTCG +
Preference number: 4 (lower is better)
Translates to: PRKEICKILMMTALAGPAAWMKS*VRNGGS
Trigger: CGAGCCACCGTTTCTGACGCAGGACTTCATCCACGC...TGCTGGGCCCGCCAATGCCGTCATCATCAGGATTTTACAAATCTCTTTGCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp AACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCTCCTACCCCCGAAGCCTTCCCACCTGGGCTGTTaGCAAGGATGCTCAAGCGTT +
Preference number: 4 (lower is better)
Translates to: NTSRKTAEQLQILLPPKPSHLGC*QGCSSV
Trigger: AACGCTTGAGCATCCTTGGCAACAGCCCAGGTGGGA...AGGCTTCGGGGGTAGGAGGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp CTGAACAGAACCCACTCAGAAGACGCACTCACCCACACGTGCGCGTACACACACAGCTGGGTAGACGGGTaGTTGCACTTTCTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: LNRTHSEDALTHTCAYTHSWVDG*LHFLAL
Trigger: CAAAGCCAGAAAGTGCAAGCACCCGTCTACCCAGCT...GTGTGTGTACGCGCACGTGTGGGTGAGTGCGTCTTCTGAGTGGGTTCTGTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp AACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCTCCTACCCCCGAAGCCTTCAAGCTGGGGTTGCTaGGGAAGCCTCCGTAATGGA +
Preference number: 4 (lower is better)
Translates to: NTSRKTAEQLQILLPPKPSSWGC*GSLRNG
Trigger: TCCATTACGGAGGCTTCCCCAGCAACCCCAGCTTGA...AGGCTTCGGGGGTAGGAGGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp AGAATGAACGCAGGAATGCAAGACAGACCCATCACAACAGCCTGGTACAGCAGCGGTCATAGAGGTCTGTaGTCCCGCACTTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RMNAGMQDRPITTAWYSSGHRGL*SRTWAA
Trigger: GGCAGCCCAAGTGCGGGACCACAGACCTCTATGACC...GCTGCTGTACCAGGCTGTTGTGATGGGTCTGTCTTGCATTCCTGCGTTCATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CCA 90 bp ACCCACACCAATGGCTGGTTCCAAAGTGTACTCCTCCTACCTGGCACCAGAGCAGCTCCTTTGCAGAGCTaGCCTGCAGTCCTTGATGGA +
Preference number: 4 (lower is better)
Translates to: THTNGWFQSVLLLPGTRAAPLQS*PAVLDG
Trigger: TCCATCAAGGACTGCAGGCCAGCTCTGCAAAGGAGC...TGCTCTGGTGCCAGGTAGGAGGAGTACACTTTGGAACCAGCCATTGGTGTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CCA 90 bp TGGAAACCTGACCCACACCAATGGCTGGTTCCAAAGTGTACTCCTCCTACCTGGCTGCGTCAGAAACGGTaGCTCGCCATCCGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: WKPDPHQWLVPKCTPPTWLRQKR*LAIRAV
Trigger: AACAGCACGGATGGCGAGCCACCGTTTCTGACGCAG...CCAGGTAGGAGGAGTACACTTTGGAACCAGCCATTGGTGTGGGTCAGGTTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CCA 90 bp AACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCTCCTACCCCCGAAGCCTTGGATGCGGGGCTCTTaGTCATCAAAGCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: NTSRKTAEQLQILLPPKPWMRGS*SSKPPA
Trigger: AGCAGGAGGCTTTGATGACCAAGAGCCCCGCATCCA...AGGCTTCGGGGGTAGGAGGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp TCTGATGGCAGAAAGACAACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCCGGGACGCCGTGCATTaGATGCGGGGCTCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: SDGRKTTPAERRLNNCRSRDAVH*MRGSWS
Trigger: TGACCAAGAGCCCCGCATCCAATGCACGGCGTCCCG...GGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTTGTCTTTCTGCCATCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp TCATTAGCAACTGAACAGAACCCACTCAGAAGACGCACTCACCCACACGTGCGCCATCCAGGTCCCACCTaGGCTGTTGCCAAGGATGCT +
Preference number: 4 (lower is better)
Translates to: SLATEQNPLRRRTHPHVRHPGPT*AVAKDA
Trigger: AGCATCCTTGGCAACAGCCCAGGTGGGACCTGGATG...GCGCACGTGTGGGTGAGTGCGTCTTCTGAGTGGGTTCTGTTCAGTTGCTAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp GCCAAGGATGCTCAAGCGTTCTCTTCAATCTTCCCTGTGACTTCCAAGAAACGACAGCCCTGGCCATCCTaGCGCTCAGAGCCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: AKDAQAFSSIFPVTSKKRQPWPS*RSEPSA
Trigger: TGCAGAGGGCTCTGAGCGCCAGGATGGCCAGGGCTG...TCGTTTCTTGGAAGTCACAGGGAAGATTGAAGAGAACGCTTGAGCATCCTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp CATTCCAAATCTCAACACGCCACGTTCAGCCCAAGTTCAGCTTGTGCATTGTGTCAGCCCTGGCCATCCTaGCGCTCAGAGCCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: HSKSQHATFSPSSACALCQPWPS*RSEPSA
Trigger: TGCAGAGGGCTCTGAGCGCCAGGATGGCCAGGGCTG...ACACAATGCACAAGCTGAACTTGGGCTGAACGTGGCGTGTTGAGATTTGGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp GACAAGATCTCTAGCCCATCCATCGGTAAACCAAGCTGCCAAGTGGCCTGGAAAACTTGGGCTGCCCTATaGTGTAGAAGTGCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: DKISSPSIGKPSCQVAWKTWAAL*CRSAAG
Trigger: GCCTGCCGCACTTCTACATCATAGGGCAGCCCAAGT...TTTCCAGGCCACTTGGCAGCTTGGTTTACCGATGGATGGGCTAGAGATCTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp TTTGGTGGGCGAGACCTTGGCCTGAGAACTTTGGTTCACAGGAAGCTTCCCTTGGCTGAAAGGCGTGGATaGAGTCCTGCGTCAGAAACG +
Preference number: 4 (lower is better)
Translates to: FGGRDLGLRTLVHRKLPLAERRG*SPASET
Trigger: CGTTTCTGACGCAGGACTTCATCCACGCCTTTCAGC...CAAGGGAAGCTTCCTGTGAACCAAAGTTCTCAGGCCAAGGTCTCGCCCACCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp CTCCATCTTCTCTCCCCGCCAGCTGCACAGGAAGGCAAGGACCACACCTGTCCTAAAGTAGAGATAGTCTaGGTACAACCTCTCCACAGG +
Preference number: 4 (lower is better)
Translates to: LHLLSPPAAQEGKDHTCPKVEIV*VQPLHR
Trigger: CCTGTGGAGAGGTTGTACTCAGACTATCTCTACTTT...AGGACAGGTGTGGTCCTTGCCTTCCTGTGCAGCTGGCGGGGAGAGAAGATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR TCA 90 bp TGGCCTCGGATAGAGGAGCTCTGTGAGGGGTCCATTGCTGAGCTCTCGAACATCTGTGTGTCCCTTCTCTaGTGGCAGAAAGACAACACC +
Preference number: 4 (lower is better)
Translates to: WPRIEELCEGSIAELSNICVSLL*WQKDNT
Trigger: GGTGTTGTCTTTCTGCCATCAGAGAAGGGACACACA...GATGTTCGAGAGCTCAGCAATGGACCCCTCACAGAGCTCCTCTATCCGAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp TGCACACGCTGCTCTCAGTTCCCTGGCCAACTCTCCTTCAGGCCTCAGCACAGATCTCTGTTCCTATGCTaGAACGCAAACCCACAATGC +
Preference number: 4 (lower is better)
Translates to: CTRCSQFPGQLSFRPQHRSLFLC*NANPQC
Trigger: GCATTGTGGGTTTGCGTTTCAGCATAGGAACAGAGA...TCTGTGCTGAGGCCTGAAGGAGAGTTGGCCAGGGAACTGAGAGCAGCGTGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp ACGGAACCTATTCTGTCAGCAAGAGCCGGGCCTCGAATGAGAGGAAGCAGAGGCGTATTCATCTTGCTCTaGTCCTTTGCAGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: TEPILSARAGPRMRGSRGVFILL*SFAELA
Trigger: GGCCAGCTCTGCAAAGGAGCAGAGCAAGATGAATAC...GCCTCTGCTTCCTCTCATTCGAGGCCCGGCTCTTGCTGACAGAATAGGTTCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp TCCCACCACCTGGGGGCTTCCAAGACTCCACAGCAGGCCTGTTGGTGCCTTGCTTTCAAACAGCTGCAGTaGTTCTGTCACTTTCTCATG +
Preference number: 4 (lower is better)
Translates to: SHHLGASKTPQQACWCLAFKQLQ*FCHFLM
Trigger: CATGAGAAAGTGACAGAAGCACTGCAGCTGTTTGAA...AGCAAGGCACCAACAGGCCTGCTGTGGAGTCTTGGAAGCCCCCAGGTGGTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp CCCCGCAAAGAGATTTGTAAAATCCTGATGATGACGGCATTGGCGGGCCCAGCAAGACGGCTGAACAACTaGAGATCCTCCTACCCCCGA +
Preference number: 4 (lower is better)
Translates to: PRKEICKILMMTALAGPARRLNN*RSSYPR
Trigger: TCGGGGGTAGGAGGATCTGCAGTTGTTCAGCCGTCT...TGCTGGGCCCGCCAATGCCGTCATCATCAGGATTTTACAAATCTCTTTGCGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp ACGGAACCTATTCTGTCAGCAAGAGCCGGGCCTCGAATGAGAGGAAGCAGAGGCCCTAAAGCATCCTTGTaGTCAGGCCAGATTTCCCTG +
Preference number: 4 (lower is better)
Translates to: TEPILSARAGPRMRGSRGPKASL*SGQISL
Trigger: CAGGGAAATCTGGCCTGAGCACAAGGATGCTTTAGG...GCCTCTGCTTCCTCTCATTCGAGGCCCGGCTCTTGCTGACAGAATAGGTTCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp ACCCACACCAATGGCTGGTTCCAAAGTGTACTCCTCCTACCTGGCACCAGAGCAAGCGGCAATGCTCGCTaGATAAGCCCTGCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: THTNGWFQSVLLLPGTRASGNAR*ISPAVE
Trigger: TTCAACAGCAGGGCTTATGCAGCGAGCATTGCCGCT...TGCTCTGGTGCCAGGTAGGAGGAGTACACTTTGGAACCAGCCATTGGTGTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp AGTGGCAAGAATGAACGCAGGAATGCAAGACAGACCCATCACAACAGCCTGGTACACCAGGCGGCTGGCTaGGTTCTGTATGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: SGKNERRNARQTHHNSLVHQAAG*VLYGRW
Trigger: CCACCTACCATACAGAACGCAGCCAGCCGCCTGGTG...TACCAGGCTGTTGTGATGGGTCTGTCTTGCATTCCTGCGTTCATTCTTGCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CCA 90 bp GCCAAGGATGCTCAAGCGTTCTCTTCAATCTTCCCTGTGACTTCCAAGAAACGAGTAGTGCCAGTGCCCTaGGCTGCTGGCTTACCGAGC +
Preference number: 4 (lower is better)
Translates to: AKDAQAFSSIFPVTSKKRVVPVP*AAGLPS
Trigger: GCTCGGTAAGCCAGCAGCCCAGGGCACTGGCACTAC...TCGTTTCTTGGAAGTCACAGGGAAGATTGAAGAGAACGCTTGAGCATCCTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp CTGAGGGGTCCCATCTCTCTCAGGGTGATGTCTAGACTTCTTCTGAGGCTAGACTCAAGCTGGGGTTGCTaGGGAAGCCTCCGTAATGGA +
Preference number: 4 (lower is better)
Translates to: LRGPISLRVMSRLLLRLDSSWGC*GSLRNG
Trigger: TCCATTACGGAGGCTTCCCCAGCAACCCCAGCTTGA...GTCTAGCCTCAGAAGAAGTCTAGACATCACCCTGAGAGAGATGGGACCCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CCA 90 bp TCTGATGGCAGAAAGACAACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCCGCTGTCCATCAAGCTaGGGTTGCTGGGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: SDGRKTTPAERRLNNCRSRCPSS*GCWGSL
Trigger: GAGGCTTCCCCAGCAACCCCAGCTTGATGGACAGCG...GGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTTGTCTTTCTGCCATCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp TGGAAACCTGACCCACACCAATGGCTGGTTCCAAAGTGTACTCCTCCTACCTGGTATTATCCCACATCGTaGAGGCACTGGCCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: WKPDPHQWLVPKCTPPTWYYPTS*RHWPPR
Trigger: TCGGGGAGGCCAGTGCCTCCACGATGTGGGATAATA...CCAGGTAGGAGGAGTACACTTTGGAACCAGCCATTGGTGTGGGTCAGGTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CCA 90 bp GCCAAGGATGCTCAAGCGTTCTCTTCAATCTTCCCTGTGACTTCCAAGAAACGACGGGACGCCGTGCATTaGATGCGGGGCTCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: AKDAQAFSSIFPVTSKKRRDAVH*MRGSWS
Trigger: TGACCAAGAGCCCCGCATCCAATGCACGGCGTCCCG...TCGTTTCTTGGAAGTCACAGGGAAGATTGAAGAGAACGCTTGAGCATCCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp TTTGGTGGGCGAGACCTTGGCCTGAGAACTTTGGTTCACAGGAAGCTTCCCTTGACTTTCTGGCTTTGGTaGGCGAGACCTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: FGGRDLGLRTLVHRKLPLTFWLW*ARPWPE
Trigger: CTCAGGCCAAGGTCTCGCCCACCAAAGCCAGAAAGT...CAAGGGAAGCTTCCTGTGAACCAAAGTTCTCAGGCCAAGGTCTCGCCCACCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp CCCCGCAAAGAGATTTGTAAAATCCTGATGATGACGGCATTGGCGGGCCCAGCAGGTGCTTGCACTTTCTaGCTTTGGTGGGCGAGACCT +
Preference number: 4 (lower is better)
Translates to: PRKEICKILMMTALAGPAGACTF*LWWARP
Trigger: AGGTCTCGCCCACCAAAGCCAGAAAGTGCAAGCACC...TGCTGGGCCCGCCAATGCCGTCATCATCAGGATTTTACAAATCTCTTTGCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp ACGGAACCTATTCTGTCAGCAAGAGCCGGGCCTCGAATGAGAGGAAGCAGAGGCTGCTTTGGTTTTGAATaGCAGGCTCGAGAACCACCG +
Preference number: 4 (lower is better)
Translates to: TEPILSARAGPRMRGSRGCFGFE*QAREPP
Trigger: CGGTGGTTCTCGAGCCTGCCATTCAAAACCAAAGCA...GCCTCTGCTTCCTCTCATTCGAGGCCCGGCTCTTGCTGACAGAATAGGTTCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp AACTCTCCTTCAGGCCTCAGCACAGACATTCCCTCTCCTAAGAACCTGCCTGAACCAGGGAGCCCAGCATaGAAAACTATCCCGGGGCTA +
Preference number: 4 (lower is better)
Translates to: NSPSGLSTDIPSPKNLPEPGSPA*KTIPGL
Trigger: TAGCCCCGGGATAGTTTTCCATGCTGGGCTCCCTGG...TTCAGGCAGGTTCTTAGGAGAGGGAATGTCTGTGCTGAGGCCTGAAGGAGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR TCA 90 bp ACGGAACCTATTCTGTCAGCAAGAGCCGGGCCTCGAATGAGAGGAAGCAGAGGCTCATGGTCTTCTCATTaGTGGATGGATTGCCATGCC +
Preference number: 4 (lower is better)
Translates to: TEPILSARAGPRMRGSRGSWSSH*WMDCHA
Trigger: GGCATGGCAATCCATCCATCAATGAGAAGACCATGA...GCCTCTGCTTCCTCTCATTCGAGGCCCGGCTCTTGCTGACAGAATAGGTTCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp AGTCCCACCACCTGGGGGCTTCCAAGACTCCACAGCAGGCCTGTTGGTGCCTTGGGAATTTGTTGGGGATaGCTGAAAACATATGCAACT +
Preference number: 4 (lower is better)
Translates to: SPTTWGLPRLHSRPVGALGICWG*LKTYAT
Trigger: AGTTGCATATGTTTTCAGTCATCCCCAACAAATTCC...CAAGGCACCAACAGGCCTGCTGTGGAGTCTTGGAAGCCCCCAGGTGGTGGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR TCA 90 bp CTTCCCTGTGACTTCCAAGAAACGACAAGATCTCTAGCCCATCCATCGGTAAACGCACGTAGGAGTTGGTaGGGTAGGGGTCGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: LPCDFQETTRSLAHPSVNARRSW*GRGRWC
Trigger: ACACCACCGACCCCTACCTCACCAACTCCTACGTGC...GTTTACCGATGGATGGGCTAGAGATCTTGTCGTTTCTTGGAAGTCACAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp CTGAGGGGTCCCATCTCTCTCAGGGTGATGTCTAGACTTCTTCTGAGGCTAGACAGTCTGGCATTTGGCTaGAAGGCGTGGATGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LRGPISLRVMSRLLLRLDSLAFG*KAWMKS
Trigger: GGACTTCATCCACGCCTTTCAGCCAAATGCCAGACT...GTCTAGCCTCAGAAGAAGTCTAGACATCACCCTGAGAGAGATGGGACCCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR TCA 90 bp CAGAGCAGAGCTGAATTCTTGAGAAACTGGGGTCTCCAATGGCCTCGGATAGAGCAGGCATGGCGTTGTTaGGGGTGTTGTTGTAGACGC +
Preference number: 4 (lower is better)
Translates to: QSRAEFLRNWGLQWPRIEQAWRC*GCCCRR
Trigger: GCGTCTACAACAACACCCTCAACAACGCCATGCCTG...CTCTATCCGAGGCCATTGGAGACCCCAGTTTCTCAAGAATTCAGCTCTGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp TGGCCTCGGATAGAGGAGCTCTGTGAGGGGTCCATTGCTGAGCTCTCGAACATCAACAGGGTTTACATCTaGAGAAACTGGAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: WPRIEELCEGSIAELSNINRVYI*RNWRAE
Trigger: CTCAGCCCTCCAGTTTCTTCAGATGTAAACCCTGTT...GATGTTCGAGAGCTCAGCAATGGACCCCTCACAGAGCTCCTCTATCCGAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp AGTCCCACCACCTGGGGGCTTCCAAGACTCCACAGCAGGCCTGTTGGTGCCTTGCAGCTTTTACATCCATaGATAATGGGGAACAGCATT +
Preference number: 4 (lower is better)
Translates to: SPTTWGLPRLHSRPVGALQLLHP*IMGNSI
Trigger: AATGCTGTTCCCCATTATTCATGGATGTAAAAGCTG...CAAGGCACCAACAGGCCTGCTGTGGAGTCTTGGAAGCCCCCAGGTGGTGGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp ACTTCTGTAAGAAGCAGAATTACACCACATGTTATTCACATGCATAGGAGTGCACGCGCGGCTCAGAGCTaGCTCGCTCGGCTCGCCGCA +
Preference number: 4 (lower is better)
Translates to: TSVRSRITPHVIHMHRSARAAQS*LARLAA
Trigger: TGCGGCGAGCCGAGCGAGGCAGCTCTGAGCCGCGCG...TGCACTCCTATGCATGTGAATAACATGTGGTGTAATTCTGCTTCTTACAGAAGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346248.7
CDS-3UTR GCA 90 bp CTTCCCTGTGACTTCCAAGAAACGACAAGATCTCTAGCCCATCCATCGGTAAACGGGTCGGTGGTGTTCTaGCCCGAGAACTCCTCGTAC +
Preference number: 4 (lower is better)
Translates to: LPCDFQETTRSLAHPSVNGSVVF*PENSSY
Trigger: GTACGAGGAGTTCTCGGGGCAGAACACCACCGACCC...GTTTACCGATGGATGGGCTAGAGATCTTGTCGTTTCTTGGAAGTCACAGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp AGAACACGGCTCTTAGAAACCTCATTCCAAATCTCAACACGCCACGTTCAGCCCCTTGCTCTGCTCCTTTaGAGAGCTGGCCTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: RTRLLETSFQISTRHVQPLALLL*RAGLQS
Trigger: GGACTGCAGGCCAGCTCTGCAAAGGAGCAGAGCAAG...GGGCTGAACGTGGCGTGTTGAGATTTGGAATGAGGTTTCTAAGAGCCGTGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp CTGCCAAGTGGCCTGGAAAATTCCATGAAGAACACGGCTCTTAGAAACCTCATTGTCCTCGGGACGCCGTaGATTGGATGCGGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: LPSGLENSMKNTALRNLIVLGTP*IGCGAL
Trigger: AAGAGCCCCGCATCCAATGCACGGCGTCCCGAGGAC...AATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATTTTCCAGGCCACTTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp TTTGGAATTGGGACACGAGTATCTATAGTCCCTTGCTGGGTGAGGAACTTTGACTGCAGGCCAGCTGGCTaGATCCCCAAGCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: FGIGTRVSIVPCWVRNFDCRPAG*IPKLQD
Trigger: GTCCTGGAGCTTGGGGATGCAGCCAGCTGGCCTGCA...GTCAAAGTTCCTCACCCAGCAAGGGACTATAGATACTCGTGTCCCAATTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp GACAAGATCTCTAGCCCATCCATCGGTAAACCAAGCTGCCAAGTGGCCTGGAAAAGACGGCTGAACAACTaGAGATCCTCCTACCCCCGA +
Preference number: 4 (lower is better)
Translates to: DKISSPSIGKPSCQVAWKRRLNN*RSSYPR
Trigger: TCGGGGGTAGGAGGATCTGCAGTTGTTCAGCCGTCT...TTTCCAGGCCACTTGGCAGCTTGGTTTACCGATGGATGGGCTAGAGATCTTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp CTGCCAAGTGGCCTGGAAAATTCCATGAAGAACACGGCTCTTAGAAACCTCATTGCGCTCAGAGCCCTCTaGACACCTTCGAACGGGCTG +
Preference number: 4 (lower is better)
Translates to: LPSGLENSMKNTALRNLIALRAL*TPSNGL
Trigger: CAGCCCGTTCGAAGGTGTGCAGAGGGCTCTGAGCGC...AATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATTTTCCAGGCCACTTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp AAGAGGCAGCAGAGAGAGAGCCAGGACTGGTTAAATGCAGAAAGTGGTTTTGTTCAGGCCAGATTTCCCTaGTGGCGGCTGCTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: KRQQRESQDWLNAESGFVQARFP*WRLLPV
Trigger: CACTGGGAGCAGCCGCCAGCAGGGAAATCTGGCCTG...AACAAAACCACTTTCTGCATTTAACCAGTCCTGGCTCTCTCTCTGCTGCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp AGGAATGCAAGACAGACCCATCACAACAGCCTGGTACAGCAGCATTATTACCCCCAGCAGGCCTGTTGGTaGCTTGCTATGCGAGACGCT +
Preference number: 4 (lower is better)
Translates to: RNARQTHHNSLVQQHYYPQQACW*LAMRDA
Trigger: AGCGTCTCGCATAGCAAGGCACCAACAGGCCTGCTG...GGGGTAATAATGCTGCTGTACCAGGCTGTTGTGATGGGTCTGTCTTGCATTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp AGGCGGCTGGCTGCGTTCTGTATGGTAGGTGGTGCTGACCACTGGGCCTCTGCAGTCTTTTATTATAGGTaGCTCAGCCATGAACACAGT +
Preference number: 4 (lower is better)
Translates to: RRLAAFCMVGGADHWASAVFYYR*LSHEHS
Trigger: ACTGTGTTCATGGCTGAGGCACCTATAATAAAAGAC...TGCAGAGGCCCAGTGGTCAGCACCACCTACCATACAGAACGCAGCCAGCCGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CCA 90 bp AAACCATGTCTGGATGGCATTGAGTGGCACAGAAGGGATGGGACTGCATATATAAGTGCCCTGGGCTGCTaGCTTACCGAGCCATGGGTG +
Preference number: 4 (lower is better)
Translates to: KPCLDGIEWHRRDGTAYISALGC*LTEPWV
Trigger: CACCCATGGCTCGGTAAGCCAGCAGCCCAGGGCACT...TATATATGCAGTCCCATCCCTTCTGTGCCACTCAATGCCATCCAGACATGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp CTTCCCTGTGACTTCCAAGAAACGACAAGATCTCTAGCCCATCCATCGGTAAACCGCTGTCCATCAAGCTaGGGTTGCTGGGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: LPCDFQETTRSLAHPSVNRCPSS*GCWGSL
Trigger: GAGGCTTCCCCAGCAACCCCAGCTTGATGGACAGCG...GTTTACCGATGGATGGGCTAGAGATCTTGTCGTTTCTTGGAAGTCACAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp CTTCCCTGTGACTTCCAAGAAACGACAAGATCTCTAGCCCATCCATCGGTAAACCCGGGTCCACCAGTGTaGCTCCTTGATGGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: LPCDFQETTRSLAHPSVNPGPPV*LLDGGE
Trigger: TTCTCCGCCATCAAGGAGCCACACTGGTGGACCCGG...GTTTACCGATGGATGGGCTAGAGATCTTGTCGTTTCTTGGAAGTCACAGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp CAGAGCAGAGCTGAATTCTTGAGAAACTGGGGTCTCCAATGGCCTCGGATAGAGTATTATCCCACATCGTaGAGGCACTGGCCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: QSRAEFLRNWGLQWPRIEYYPTS*RHWPPR
Trigger: TCGGGGAGGCCAGTGCCTCCACGATGTGGGATAATA...CTCTATCCGAGGCCATTGGAGACCCCAGTTTCTCAAGAATTCAGCTCTGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp ACGGAACCTATTCTGTCAGCAAGAGCCGGGCCTCGAATGAGAGGAAGCAGAGGCGGGAAAAACCATGTCTaGATGGCATTGAGTGGCACA +
Preference number: 4 (lower is better)
Translates to: TEPILSARAGPRMRGSRGGKNHV*MALSGT
Trigger: TGTGCCACTCAATGCCATCCAGACATGGTTTTTCCC...GCCTCTGCTTCCTCTCATTCGAGGCCCGGCTCTTGCTGACAGAATAGGTTCCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp GCCAAGGATGCTCAAGCGTTCTCTTCAATCTTCCCTGTGACTTCCAAGAAACGAAGCCGAAGTGCCCTCTaGAGAGAAAGGCCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: AKDAQAFSSIFPVTSKKRSRSAL*RERPLE
Trigger: CTCCAGGGGCCTTTCTCTCCAGAGGGCACTTCGGCT...TCGTTTCTTGGAAGTCACAGGGAAGATTGAAGAGAACGCTTGAGCATCCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp CTGGGTGTCTTGCTAAATGGTAATCTTCCTAAAGGCACCCTCATCCTCCTGCTGCCACAGCAGGCCTGTTaGTGCCTTGCTATGCGAGAC +
Preference number: 4 (lower is better)
Translates to: LGVLLNGNLPKGTLILLLPQQAC*CLAMRD
Trigger: GTCTCGCATAGCAAGGCACCAACAGGCCTGCTGTGG...CAGCAGGAGGATGAGGGTGCCTTTAGGAAGATTACCATTTAGCAAGACACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR TCA 90 bp GACAAGATCTCTAGCCCATCCATCGGTAAACCAAGCTGCCAAGTGGCCTGGAAAAGTCTGGCATTTGGCTaGAAGGCGTGGATGAAGTCC +
Preference number: 4 (lower is better)
Translates to: DKISSPSIGKPSCQVAWKSLAFG*KAWMKS
Trigger: GGACTTCATCCACGCCTTTCAGCCAAATGCCAGACT...TTTCCAGGCCACTTGGCAGCTTGGTTTACCGATGGATGGGCTAGAGATCTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp CAGAGCAGAGCTGAATTCTTGAGAAACTGGGGTCTCCAATGGCCTCGGATAGAGAGTCTGGCATTTGGCTaGAAGGCGTGGATGAAGTCC +
Preference number: 4 (lower is better)
Translates to: QSRAEFLRNWGLQWPRIESLAFG*KAWMKS
Trigger: GGACTTCATCCACGCCTTTCAGCCAAATGCCAGACT...CTCTATCCGAGGCCATTGGAGACCCCAGTTTCTCAAGAATTCAGCTCTGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp CTGAACAGAACCCACTCAGAAGACGCACTCACCCACACGTGCGCGTACACACACCTTCCAGGCGAAGAATaGGAAACTGTTGCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: LNRTHSEDALTHTCAYTHLPGEE*ETVACQ
Trigger: TTGACAAGCAACAGTTTCTCATTCTTCGCCTGGAAG...GTGTGTGTACGCGCACGTGTGGGTGAGTGCGTCTTCTGAGTGGGTTCTGTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp GCCAAGGATGCTCAAGCGTTCTCTTCAATCTTCCCTGTGACTTCCAAGAAACGAGCAGAATCTTCTGTGTaGTGGGCCACATGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: AKDAQAFSSIFPVTSKKRAESSV*WATWAP
Trigger: TGGGGCCCATGTGGCCCATCACACAGAAGATTCTGC...TCGTTTCTTGGAAGTCACAGGGAAGATTGAAGAGAACGCTTGAGCATCCTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp TTTGGTGGGCGAGACCTTGGCCTGAGAACTTTGGTTCACAGGAAGCTTCCCTTGGGGTTTTCCATACCATaGGTGAAACAGTTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: FGGRDLGLRTLVHRKLPLGFSIP*VKQFPA
Trigger: TGCGGGGAACTGTTTCACTCATGGTATGGAAAACCC...CAAGGGAAGCTTCCTGTGAACCAAAGTTCTCAGGCCAAGGTCTCGCCCACCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp CTGAACAGAACCCACTCAGAAGACGCACTCACCCACACGTGCGCGTACACACACAAGAAACTGGAGGGCTaGGTTTGGAGTAAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LNRTHSEDALTHTCAYTHKKLEG*VWSKGE
Trigger: TTCTCCTTTACTCCAAACTCAGCCCTCCAGTTTCTT...GTGTGTGTACGCGCACGTGTGGGTGAGTGCGTCTTCTGAGTGGGTTCTGTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp GACAAGATCTCTAGCCCATCCATCGGTAAACCAAGCTGCCAAGTGGCCTGGAAACTGGGTGAGGAACTTTaGCCACACGCAGTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: DKISSPSIGKPSCQVAWKLGEEL*PHAVEN
Trigger: ATTCTCCACTGCGTGTGGTCAAAGTTCCTCACCCAG...TTTCCAGGCCACTTGGCAGCTTGGTTTACCGATGGATGGGCTAGAGATCTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp AGAACACGGCTCTTAGAAACCTCATTCCAAATCTCAACACGCCACGTTCAGCCCGGCGAGACCTTGGCCTaGGAACTTTGGTTCACAGGA +
Preference number: 4 (lower is better)
Translates to: RTRLLETSFQISTRHVQPGETLA*ELWFTG
Trigger: TCCTGTGAACCAAAGTTCTCAGGCCAAGGTCTCGCC...GGGCTGAACGTGGCGTGTTGAGATTTGGAATGAGGTTTCTAAGAGCCGTGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp ACTATCTTCTGCTTAAAACCCTCTGAGGGGTCCCATCTCTCTCAGGGTGATGTCGTTCGGGAGCAGCTCTaGCTGCCCTTCAGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: TIFCLKPSEGSHLSQGDVVREQL*LPFRFF
Trigger: GAAAAACCTGAAGGGCAGGCAGAGCTGCTCCCGAAC...GACATCACCCTGAGAGAGATGGGACCCCTCAGAGGGTTTTAAGCAGAAGATAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp CTGCCAAGTGGCCTGGAAAATTCCATGAAGAACACGGCTCTTAGAAACCTCATTTGGCAGTTGACCTGCTaGTTGTGTGCGCCGTCGGGT +
Preference number: 4 (lower is better)
Translates to: LPSGLENSMKNTALRNLIWQLTC*LCAPSG
Trigger: ACCCGACGGCGCACACAAGCAGCAGGTCAACTGCCA...AATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATTTTCCAGGCCACTTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp AAACCATGTCTGGATGGCATTGAGTGGCACAGAAGGGATGGGACTGCATATATATGGCAGTTGACCTGCTaGTTGTGTGCGCCGTCGGGT +
Preference number: 4 (lower is better)
Translates to: KPCLDGIEWHRRDGTAYIWQLTC*LCAPSG
Trigger: ACCCGACGGCGCACACAAGCAGCAGGTCAACTGCCA...TATATATGCAGTCCCATCCCTTCTGTGCCACTCAATGCCATCCAGACATGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp TTTGGAATTGGGACACGAGTATCTATAGTCCCTTGCTGGGTGAGGAACTTTGACGGGTCGGTGGTGTTCTaGCCCGAGAACTCCTCGTAC +
Preference number: 4 (lower is better)
Translates to: FGIGTRVSIVPCWVRNFDGSVVF*PENSSY
Trigger: GTACGAGGAGTTCTCGGGGCAGAACACCACCGACCC...GTCAAAGTTCCTCACCCAGCAAGGGACTATAGATACTCGTGTCCCAATTCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp AGCGTAACTGCGATTCACTTAACATACCTTACAGGACTAAGGGAGTACAATTTACGGAAGTGCTTCCCGTaGGCGTGCGCCAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SVTAIHLTYLTGLREYNLRKCFP*ACARWP
Trigger: GGGCCACCTGGCGCACGCGCACGGGAAGCACTTCCG...TAAATTGTACTCCCTTAGTCCTGTAAGGTATGTTAAGTGAATCGCAGTTACGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp AGAATGAACGCAGGAATGCAAGACAGACCCATCACAACAGCCTGGTACAGCAGCTTGATGGATCTGGTGTaGGGCCAGGTCAAAGAGGTC +
Preference number: 4 (lower is better)
Translates to: RMNAGMQDRPITTAWYSSLMDLV*GQVKEV
Trigger: GACCTCTTTGACCTGGCCGCACACCAGATCCATCAA...GCTGCTGTACCAGGCTGTTGTGATGGGTCTGTCTTGCATTCCTGCGTTCATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp ATGATCACACCTGTGAAGATAGCCATTGAATACAGACAGTCTGTGCAACACGGCTCATCCGCGAGGACCTaGGCCAGCCTAGCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: MITPVKIAIEYRQSVQHGSSART*ASLALK
Trigger: CTTCAACGCTAGGCTGGCGCAGGTCCTCGCGGATGA...GCCGTGTTGCACAGACTGTCTGTATTCAATGGCTATCTTCACAGGTGTGATCAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp ATTCCAAATCTCAACACGCCACGTTCAGCCCAAGTTCAGCTTGTGCATTGTGTTGGCGGGCCCAGCACGTaGAGCAACAATTCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: IPNLNTPRSAQVQLVHCVGGPST*SNNSAL
Trigger: GAGAGCTGAATTGTTGCTGCACGTGCTGGGCCCGCC...AACACAATGCACAAGCTGAACTTGGGCTGAACGTGGCGTGTTGAGATTTGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp AACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCTCCTACCCCCGAAGCCTGGCTGTTGCCAAGGATaGTCAAGCGTTCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: NTSRKTAEQLQILLPPKPGCCQG*SSVLFN
Trigger: ATTGAAGAGAACGCTTGAGCATCCTTGGCAACAGCC...AGGCTTCGGGGGTAGGAGGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp CTGCCAAGTGGCCTGGAAAATTCCATGAAGAACACGGCTCTTAGAAACCTCATTCAGAGGCAGCCGAAGTaGCCTCTGGAGAGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: LPSGLENSMKNTALRNLIQRQPK*PLERKA
Trigger: GGCCTTTCTCTCCAGAGGGCACTTCGGCTGCCTCTG...AATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATTTTCCAGGCCACTTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp ACGGAACCTATTCTGTCAGCAAGAGCCGGGCCTCGAATGAGAGGAAGCAGAGGCCTCCTTTGTGTCACTTaGGTTTTCGCTGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: TEPILSARAGPRMRGSRGLLCVT*VFAVHQ
Trigger: TTGATGGACAGCGAAAACCCAAGTGACACAAAGGAG...GCCTCTGCTTCCTCTCATTCGAGGCCCGGCTCTTGCTGACAGAATAGGTTCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp AAACCATGTCTGGATGGCATTGAGTGGCACAGAAGGGATGGGACTGCATATATAGGTCATAGAGGTCTGTaGTCCCGCACTTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: KPCLDGIEWHRRDGTAYIGHRGL*SRTWAA
Trigger: GGCAGCCCAAGTGCGGGACCACAGACCTCTATGACC...TATATATGCAGTCCCATCCCTTCTGTGCCACTCAATGCCATCCAGACATGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp TGGCCTCGGATAGAGGAGCTCTGTGAGGGGTCCATTGCTGAGCTCTCGAACATCTCTGTCACTTTCTCATaGAAGTCGTCCGCGGATTTA +
Preference number: 4 (lower is better)
Translates to: WPRIEELCEGSIAELSNISVTFS*KSSADL
Trigger: TAAATCCGCGGACGACTTCCATGAGAAAGTGACAGA...GATGTTCGAGAGCTCAGCAATGGACCCCTCACAGAGCTCCTCTATCCGAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp AGAACACGGCTCTTAGAAACCTCATTCCAAATCTCAACACGCCACGTTCAGCCCTGGATGCGGGGCTCTTaGTCATCAAAGCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RTRLLETSFQISTRHVQPWMRGS*SSKPPA
Trigger: AGCAGGAGGCTTTGATGACCAAGAGCCCCGCATCCA...GGGCTGAACGTGGCGTGTTGAGATTTGGAATGAGGTTTCTAAGAGCCGTGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp ACGGAACCTATTCTGTCAGCAAGAGCCGGGCCTCGAATGAGAGGAAGCAGAGGCAACCAAGCTGCCAAGTaGCCTGGAAAATTCCATGAA +
Preference number: 4 (lower is better)
Translates to: TEPILSARAGPRMRGSRGNQAAK*PGKFHE
Trigger: TTCATGGAATTTTCCAGGCCACTTGGCAGCTTGGTT...GCCTCTGCTTCCTCTCATTCGAGGCCCGGCTCTTGCTGACAGAATAGGTTCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp GACAAGATCTCTAGCCCATCCATCGGTAAACCAAGCTGCCAAGTGGCCTGGAAAGGAGAGAAAGGCCCCTaGAGGGAAAAACCATGTCTG +
Preference number: 4 (lower is better)
Translates to: DKISSPSIGKPSCQVAWKGEKGP*REKPCL
Trigger: CAGACATGGTTTTTCCCTCCAGGGGCCTTTCTCTCC...TTTCCAGGCCACTTGGCAGCTTGGTTTACCGATGGATGGGCTAGAGATCTTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp TGGAAACCTGACCCACACCAATGGCTGGTTCCAAAGTGTACTCCTCCTACCTGGCCTGACCCACACCAATaGCTGGTTCCAAAGTGTACT +
Preference number: 4 (lower is better)
Translates to: WKPDPHQWLVPKCTPPTWPDPHQ*LVPKCT
Trigger: AGTACACTTTGGAACCAGCCATTGGTGTGGGTCAGG...CCAGGTAGGAGGAGTACACTTTGGAACCAGCCATTGGTGTGGGTCAGGTTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR TCA 90 bp CCCCGCAAAGAGATTTGTAAAATCCTGATGATGACGGCATTGGCGGGCCCAGCAACAGAGGATTGGTGGTaGTGCTCCTTTGTGTCACTT +
Preference number: 4 (lower is better)
Translates to: PRKEICKILMMTALAGPATEDWW*CSFVSL
Trigger: AAGTGACACAAAGGAGCATCACCACCAATCCTCTGT...TGCTGGGCCCGCCAATGCCGTCATCATCAGGATTTTACAAATCTCTTTGCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp TTTGGAATTGGGACACGAGTATCTATAGTCCCTTGCTGGGTGAGGAACTTTGACACTTGGGCTGCCCTATaGTGTAGAAGTGCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: FGIGTRVSIVPCWVRNFDTWAAL*CRSAAG
Trigger: GCCTGCCGCACTTCTACATCATAGGGCAGCCCAAGT...GTCAAAGTTCCTCACCCAGCAAGGGACTATAGATACTCGTGTCCCAATTCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp AACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCTCCTACCCCCGAAGCCTAAAGTAGAGATAGTCTaGGTACAACCTCTCCACAGG +
Preference number: 4 (lower is better)
Translates to: NTSRKTAEQLQILLPPKPKVEIV*VQPLHR
Trigger: CCTGTGGAGAGGTTGTACTCAGACTATCTCTACTTT...AGGCTTCGGGGGTAGGAGGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp CAGAGCAGAGCTGAATTCTTGAGAAACTGGGGTCTCCAATGGCCTCGGATAGAGGACGCAGGCGCGCAGTaGATAATCAAGCATGCAATT +
Preference number: 4 (lower is better)
Translates to: QSRAEFLRNWGLQWPRIEDAGAQ*IIKHAI
Trigger: AATTGCATGCTTGATTATTCACTGCGCGCCTGCGTC...CTCTATCCGAGGCCATTGGAGACCCCAGTTTCTCAAGAATTCAGCTCTGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp CTTCCCTGTGACTTCCAAGAAACGACAAGATCTCTAGCCCATCCATCGGTAAACCAGGCATGGCGTTGTTaGGGGTGTTGTTGTAGACGC +
Preference number: 4 (lower is better)
Translates to: LPCDFQETTRSLAHPSVNQAWRC*GCCCRR
Trigger: GCGTCTACAACAACACCCTCAACAACGCCATGCCTG...GTTTACCGATGGATGGGCTAGAGATCTTGTCGTTTCTTGGAAGTCACAGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp GACAAGATCTCTAGCCCATCCATCGGTAAACCAAGCTGCCAAGTGGCCTGGAAAGCTTGTCAAAAACGCTaGGCCAGTCCAGAAGGTACA +
Preference number: 4 (lower is better)
Translates to: DKISSPSIGKPSCQVAWKACQKR*ASPEGT
Trigger: TGTACCTTCTGGACTGGCTCAGCGTTTTTGACAAGC...TTTCCAGGCCACTTGGCAGCTTGGTTTACCGATGGATGGGCTAGAGATCTTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp TGGCCTCGGATAGAGGAGCTCTGTGAGGGGTCCATTGCTGAGCTCTCGAACATCAAGTGTTCAATTCCTTaGGGTTGCTCATTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: WPRIEELCEGSIAELSNIKCSIP*GCSFWH
Trigger: ATGCCAGAATGAGCAACCTCAAGGAATTGAACACTT...GATGTTCGAGAGCTCAGCAATGGACCCCTCACAGAGCTCCTCTATCCGAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp TCTGATGGCAGAAAGACAACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCCAGCAGAAAGACGGCTaGACAACTGCAGATCCTCCT +
Preference number: 4 (lower is better)
Translates to: SDGRKTTPAERRLNNCRSQQKDG*TTADPP
Trigger: AGGAGGATCTGCAGTTGTTCAGCCGTCTTTCTGCTG...GGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTTGTCTTTCTGCCATCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp GCCAGCAAATGGCCAAGCTGGAAACCTGACCCACACCAATGGCTGGTTCCAAAGGCTCTTAAGACAATTTaGGAGTTGGGTGTCCTCATG +
Preference number: 4 (lower is better)
Translates to: ASKWPSWKPDPHQWLVPKALKTI*ELGVLM
Trigger: CATGAGGACACCCAACTCTCAAATTGTCTTAAGAGC...CTTTGGAACCAGCCATTGGTGTGGGTCAGGTTTCCAGCTTGGCCATTTGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR TCA 90 bp AGAATGAACGCAGGAATGCAAGACAGACCCATCACAACAGCCTGGTACAGCAGCGAGTCTCAGAAAGGCTaGGACAACTGCCTAGAGTCA +
Preference number: 4 (lower is better)
Translates to: RMNAGMQDRPITTAWYSSESQKG*DNCLES
Trigger: TGACTCTAGGCAGTTGTCTCAGCCTTTCTGAGACTC...GCTGCTGTACCAGGCTGTTGTGATGGGTCTGTCTTGCATTCCTGCGTTCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp TCTGATGGCAGAAAGACAACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCATGGATGGATTGCCATaGCATCCACGGAGGCATCTG +
Preference number: 4 (lower is better)
Translates to: SDGRKTTPAERRLNNCRSMDGLP*HPRRHL
Trigger: CAGATGCCTCCGTGGATGGCATGGCAATCCATCCAT...GGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTTGTCTTTCTGCCATCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp CCCAGATCCCACGGCCTCTGTAGTAAGAAAGAGGGGGCAGAGCCTCTTGGCCTGAACATATGCAACTCCTaGTTCTTAAGGTCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: PRSHGLCSKKEGAEPLGLNICNS*FLRSSK
Trigger: CTTAGAAGACCTTAAGAAGCAGGAGTTGCATATGTT...CAGGCCAAGAGGCTCTGCCCCCTCTTTCTTACTACAGAGGCCGTGGGATCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp AGCGTAACTGCGATTCACTTAACATACCTTACAGGACTAAGGGAGTACAATTTATGCTTCCCGTGCGCGTaGGCCAGGTGGCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: SVTAIHLTYLTGLREYNLCFPCA*ARWPQK
Trigger: CTTCTGGGGCCACCTGGCGCACGCGCACGGGAAGCA...TAAATTGTACTCCCTTAGTCCTGTAAGGTATGTTAAGTGAATCGCAGTTACGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp AACTCTCCTTCAGGCCTCAGCACAGACATTCCCTCTCCTAAGAACCTGCCTGAAGTATTCATCTTGCTCTaGTCCTTTGCAGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: NSPSGLSTDIPSPKNLPEVFILL*SFAELA
Trigger: GGCCAGCTCTGCAAAGGAGCAGAGCAAGATGAATAC...TTCAGGCAGGTTCTTAGGAGAGGGAATGTCTGTGCTGAGGCCTGAAGGAGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp CCCCGCAAAGAGATTTGTAAAATCCTGATGATGACGGCATTGGCGGGCCCAGCAGTACTTGACGTTGGATaGATGATCTTCCAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: PRKEICKILMMTALAGPAVLDVG*MIFQAK
Trigger: CTTCGCCTGGAAGATCATGCATCCAACGTCAAGTAC...TGCTGGGCCCGCCAATGCCGTCATCATCAGGATTTTACAAATCTCTTTGCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp GCCAAGGATGCTCAAGCGTTCTCTTCAATCTTCCCTGTGACTTCCAAGAAACGAACGCCGTGCATTGGATaGGGGGCTCTTGGTCATCAA +
Preference number: 4 (lower is better)
Translates to: AKDAQAFSSIFPVTSKKRTPCIG*GALGHQ
Trigger: TTGATGACCAAGAGCCCCGCATCCAATGCACGGCGT...TCGTTTCTTGGAAGTCACAGGGAAGATTGAAGAGAACGCTTGAGCATCCTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp GTTCCAAAGTGTACTCCTCCTACCTGGCACCAGAGCAGGCTCTGGGGTTACCTGACCCACAATGCCGCTTaGATAATAACAACAAACCAG +
Preference number: 4 (lower is better)
Translates to: VPKCTPPTWHQSRLWGYLTHNAA*IITTNQ
Trigger: CTGGTTTGTTGTTATTATGCAAGCGGCATTGTGGGT...CAGGTAACCCCAGAGCCTGCTCTGGTGCCAGGTAGGAGGAGTACACTTTGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp AGATCCCACGGCCTCTGTAGTAAGAAAGAGGGGGCAGAGCCTCTTGGCCTGAAGAACGCAAACCCACAATaGCGCTTGCATAATAACAAC +
Preference number: 4 (lower is better)
Translates to: RSHGLCSKKEGAEPLGLKNANPQ*RLHNNN
Trigger: GTTGTTATTATGCAAGCGGCATTGTGGGTTTGCGTT...CTTCAGGCCAAGAGGCTCTGCCCCCTCTTTCTTACTACAGAGGCCGTGGGATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CCA 90 bp ACGGAACCTATTCTGTCAGCAAGAGCCGGGCCTCGAATGAGAGGAAGCAGAGGCTGGAAGAATTCTCACTaGGGAATGTGGAAACACACA +
Preference number: 4 (lower is better)
Translates to: TEPILSARAGPRMRGSRGWKNSH*GMWKHT
Trigger: TGTGTGTTTCCACATTCCCCAGTGAGAATTCTTCCA...GCCTCTGCTTCCTCTCATTCGAGGCCCGGCTCTTGCTGACAGAATAGGTTCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp AGATCCCACGGCCTCTGTAGTAAGAAAGAGGGGGCAGAGCCTCTTGGCCTGAAGAGGGTGCACATTCTTTaGTTCAGCTCCGAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: RSHGLCSKKEGAEPLGLKRVHIL*FSSERK
Trigger: TTTTCTTTCGGAGCTGAACCAAAGAATGTGCACCCT...CTTCAGGCCAAGAGGCTCTGCCCCCTCTTTCTTACTACAGAGGCCGTGGGATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CCA 90 bp AATTCCATGAAGAACACGGCTCTTAGAAACCTCATTCCAAATCTCAACACGCCAAGTGCCCTGGGCTGCTaGCTTACCGAGCCATGGGTG +
Preference number: 4 (lower is better)
Translates to: NSMKNTALRNLIPNLNTPSALGC*LTEPWV
Trigger: CACCCATGGCTCGGTAAGCCAGCAGCCCAGGGCACT...TGGCGTGTTGAGATTTGGAATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp GCCAGCAAATGGCCAAGCTGGAAACCTGACCCACACCAATGGCTGGTTCCAAAGCTCCTTTGTGTCACTTaGGTTTTCGCTGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: ASKWPSWKPDPHQWLVPKLLCVT*VFAVHQ
Trigger: TTGATGGACAGCGAAAACCCAAGTGACACAAAGGAG...CTTTGGAACCAGCCATTGGTGTGGGTCAGGTTTCCAGCTTGGCCATTTGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CCA 90 bp AATTCCATGAAGAACACGGCTCTTAGAAACCTCATTCCAAATCTCAACACGCCAGCAGGGCGTCGAAGGTaGAGCGGAAGCGCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: NSMKNTALRNLIPNLNTPAGRRR*SGSAWS
Trigger: ACTCCAAGCGCTTCCGCTCCACCTTCGACGCCCTGC...TGGCGTGTTGAGATTTGGAATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp CATTCCAAATCTCAACACGCCACGTTCAGCCCAAGTTCAGCTTGTGCATTGTGTTATTATCCCACATCGTaGAGGCACTGGCCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: HSKSQHATFSPSSACALCYYPTS*RHWPPR
Trigger: TCGGGGAGGCCAGTGCCTCCACGATGTGGGATAATA...ACACAATGCACAAGCTGAACTTGGGCTGAACGTGGCGTGTTGAGATTTGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp ATTCCAAATCTCAACACGCCACGTTCAGCCCAAGTTCAGCTTGTGCATTGTGTTCTGCGTCAGAAACGGTaGCTCGCCATCCGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: IPNLNTPRSAQVQLVHCVLRQKR*LAIRAV
Trigger: AACAGCACGGATGGCGAGCCACCGTTTCTGACGCAG...AACACAATGCACAAGCTGAACTTGGGCTGAACGTGGCGTGTTGAGATTTGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp CTGGCCAACTCTCCTTCAGGCCTCAGCACAGACATTCCCTCTCCTAAGAACCTGAATCAGTCTGGCATTTaGCTGAAAGGCGTGGATGAA +
Preference number: 4 (lower is better)
Translates to: LANSPSGLSTDIPSPKNLNQSGI*LKGVDE
Trigger: TTCATCCACGCCTTTCAGCCAAATGCCAGACTGATT...CAGGTTCTTAGGAGAGGGAATGTCTGTGCTGAGGCCTGAAGGAGAGTTGGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CCA 90 bp CAGAGCAGAGCTGAATTCTTGAGAAACTGGGGTCTCCAATGGCCTCGGATAGAGAGAGTGGCAGAGTCCTaGGGTTTTCCATACCATGAG +
Preference number: 4 (lower is better)
Translates to: QSRAEFLRNWGLQWPRIERVAES*GFPYHE
Trigger: CTCATGGTATGGAAAACCCCAGGACTCTGCCACTCT...CTCTATCCGAGGCCATTGGAGACCCCAGTTTCTCAAGAATTCAGCTCTGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp AGAACACGGCTCTTAGAAACCTCATTCCAAATCTCAACACGCCACGTTCAGCCCCATGTGTGCCTAGAGTaGCAGAGTCCTGGGGTTTTC +
Preference number: 4 (lower is better)
Translates to: RTRLLETSFQISTRHVQPHVCLE*QSPGVF
Trigger: GAAAACCCCAGGACTCTGCCACTCTAGGCACACATG...GGGCTGAACGTGGCGTGTTGAGATTTGGAATGAGGTTTCTAAGAGCCGTGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp TTTGGAATTGGGACACGAGTATCTATAGTCCCTTGCTGGGTGAGGAACTTTGACTTCCAGCCAGGCCTGTaGCATGACCTCTGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: FGIGTRVSIVPCWVRNFDFQPGL*HDLWLA
Trigger: AGCAAGCCAGAGGTCATGCCACAGGCCTGGCTGGAA...GTCAAAGTTCCTCACCCAGCAAGGGACTATAGATACTCGTGTCCCAATTCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp AAGAGGCAGCAGAGAGAGAGCCAGGACTGGTTAAATGCAGAAAGTGGTTTTGTTCATCCAGGTCCCACCTaGGCTGTTGCCAAGGATGCT +
Preference number: 4 (lower is better)
Translates to: KRQQRESQDWLNAESGFVHPGPT*AVAKDA
Trigger: AGCATCCTTGGCAACAGCCCAGGTGGGACCTGGATG...AACAAAACCACTTTCTGCATTTAACCAGTCCTGGCTCTCTCTCTGCTGCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp TCTGATGGCAGAAAGACAACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCCCTACCCCCGAAGCCTaGTCTGTCTCACACATACAA +
Preference number: 4 (lower is better)
Translates to: SDGRKTTPAERRLNNCRSPTPEA*SVSHIQ
Trigger: TTGTATGTGTGAGACAGACCAGGCTTCGGGGGTAGG...GGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTTGTCTTTCTGCCATCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp GACAAGATCTCTAGCCCATCCATCGGTAAACCAAGCTGCCAAGTGGCCTGGAAATGCTTTGGTTTTGAATaGCAGGCTCGAGAACCACCG +
Preference number: 4 (lower is better)
Translates to: DKISSPSIGKPSCQVAWKCFGFE*QAREPP
Trigger: CGGTGGTTCTCGAGCCTGCCATTCAAAACCAAAGCA...TTTCCAGGCCACTTGGCAGCTTGGTTTACCGATGGATGGGCTAGAGATCTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp CTGAGGGGTCCCATCTCTCTCAGGGTGATGTCTAGACTTCTTCTGAGGCTAGACAGACAATTTGAGAGTTaGGTGTCCTCATGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: LRGPISLRVMSRLLLRLDRQFES*VSSCLP
Trigger: CGGCAGACATGAGGACACCCAACTCTCAAATTGTCT...GTCTAGCCTCAGAAGAAGTCTAGACATCACCCTGAGAGAGATGGGACCCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CCA 90 bp TGGAAACCTGACCCACACCAATGGCTGGTTCCAAAGTGTACTCCTCCTACCTGGTTACCTGTGTCCCTGTaGCATCTTCCTTGCCAAACT +
Preference number: 4 (lower is better)
Translates to: WKPDPHQWLVPKCTPPTWLPVSL*HLPCQT
Trigger: AGTTTGGCAAGGAAGATGCCACAGGGACACAGGTAA...CCAGGTAGGAGGAGTACACTTTGGAACCAGCCATTGGTGTGGGTCAGGTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
3UTR CAA 72 bp CGCAAAGAGATTTGTAAAATCCTGATGATGACGGCATaGGCGGGCCCAGCACGTGCAGCAACAATTCAGCTC +
Preference number: 4 (lower is better)
Translates to: RKEICKILMMTA*AGPARAATIQL
Trigger: GAGCTGAATTGTTGCTGCACGTGCTGGGCCCGCCAATGCCGTCATCATCAGGATTTTACAAATCTCTTTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR CAA 72 bp TCTGGCTTTGGTGGGCGAGACCTTGGCCTGAGAACTTaGGTTCACAGGAAGCTTCCCTTGACAATACTTGAG +
Preference number: 4 (lower is better)
Translates to: SGFGGRDLGLRT*VHRKLPLTILE
Trigger: CTCAAGTATTGTCAAGGGAAGCTTCCTGTGAACCAAAGTTCTCAGGCCAAGGTCTCGCCCACCAAAGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp AGAACACGGCTCTTAGAAACCTCATTCCAAATCTCAACACGCCACGTTCAGCCCCCACGGAGGCATCTGTaGAGATCTCCCCTTTTACAT +
Preference number: 4 (lower is better)
Translates to: RTRLLETSFQISTRHVQPPRRHL*RSPLLH
Trigger: ATGTAAAAGGGGAGATCTTCACAGATGCCTCCGTGG...GGGCTGAACGTGGCGTGTTGAGATTTGGAATGAGGTTTCTAAGAGCCGTGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp AACTCTCCTTCAGGCCTCAGCACAGACATTCCCTCTCCTAAGAACCTGCCTGAATCATGGTCTTCTCATTaGTGGATGGATTGCCATGCC +
Preference number: 4 (lower is better)
Translates to: NSPSGLSTDIPSPKNLPESWSSH*WMDCHA
Trigger: GGCATGGCAATCCATCCATCAATGAGAAGACCATGA...TTCAGGCAGGTTCTTAGGAGAGGGAATGTCTGTGCTGAGGCCTGAAGGAGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR TCA 90 bp GACAAGATCTCTAGCCCATCCATCGGTAAACCAAGCTGCCAAGTGGCCTGGAAAACAGAGGATTGGTGGTaGTGCTCCTTTGTGTCACTT +
Preference number: 4 (lower is better)
Translates to: DKISSPSIGKPSCQVAWKTEDWW*CSFVSL
Trigger: AAGTGACACAAAGGAGCATCACCACCAATCCTCTGT...TTTCCAGGCCACTTGGCAGCTTGGTTTACCGATGGATGGGCTAGAGATCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp CTGCCAAGTGGCCTGGAAAATTCCATGAAGAACACGGCTCTTAGAAACCTCATTGCTGAAAGGCGTGGATaGAGTCCTGCGTCAGAAACG +
Preference number: 4 (lower is better)
Translates to: LPSGLENSMKNTALRNLIAERRG*SPASET
Trigger: CGTTTCTGACGCAGGACTTCATCCACGCCTTTCAGC...AATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATTTTCCAGGCCACTTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp TTTGGTGGGCGAGACCTTGGCCTGAGAACTTTGGTTCACAGGAAGCTTCCCTTGTTTCCATACCATGAGTaGAACAGTTCCCCGCAAAGA +
Preference number: 4 (lower is better)
Translates to: FGGRDLGLRTLVHRKLPLFPYHE*NSSPQR
Trigger: TCTTTGCGGGGAACTGTTTCACTCATGGTATGGAAA...CAAGGGAAGCTTCCTGTGAACCAAAGTTCTCAGGCCAAGGTCTCGCCCACCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp GCCAAGGATGCTCAAGCGTTCTCTTCAATCTTCCCTGTGACTTCCAAGAAACGACGCTCAGAGCAGAGCTaGATTCTTGAGAAACTGGGG +
Preference number: 4 (lower is better)
Translates to: AKDAQAFSSIFPVTSKKRRSEQS*ILEKLG
Trigger: CCCCAGTTTCTCAAGAATTCAGCTCTGCTCTGAGCG...TCGTTTCTTGGAAGTCACAGGGAAGATTGAAGAGAACGCTTGAGCATCCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp TGGCCTCGGATAGAGGAGCTCTGTGAGGGGTCCATTGCTGAGCTCTCGAACATCAATATACACACACACTaGAGTGATCTCTCCCTAAAG +
Preference number: 4 (lower is better)
Translates to: WPRIEELCEGSIAELSNINIHTH*SDLSLK
Trigger: CTTTAGGGAGAGATCACTTCAGTGTGTGTGTATATT...GATGTTCGAGAGCTCAGCAATGGACCCCTCACAGAGCTCCTCTATCCGAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp GCCAAGGATGCTCAAGCGTTCTCTTCAATCTTCCCTGTGACTTCCAAGAAACGAATGTCTGGATGGCATTaGGTGGCACAGAAGGGATGG +
Preference number: 4 (lower is better)
Translates to: AKDAQAFSSIFPVTSKKRMSGWH*VAQKGW
Trigger: CCATCCCTTCTGTGCCACTCAATGCCATCCAGACAT...TCGTTTCTTGGAAGTCACAGGGAAGATTGAAGAGAACGCTTGAGCATCCTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp CATTCCAAATCTCAACACGCCACGTTCAGCCCAAGTTCAGCTTGTGCATTGTGTATGTCTGGATGGCATTaGGTGGCACAGAAGGGATGG +
Preference number: 4 (lower is better)
Translates to: HSKSQHATFSPSSACALCMSGWH*VAQKGW
Trigger: CCATCCCTTCTGTGCCACTCAATGCCATCCAGACAT...ACACAATGCACAAGCTGAACTTGGGCTGAACGTGGCGTGTTGAGATTTGGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp ATGATCACACCTGTGAAGATAGCCATTGAATACAGACAGTCTGTGCAACACGGCGTTCGGGAGCAGCTCTaGCTGCCCTTCAGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: MITPVKIAIEYRQSVQHGVREQL*LPFRFF
Trigger: GAAAAACCTGAAGGGCAGGCAGAGCTGCTCCCGAAC...GCCGTGTTGCACAGACTGTCTGTATTCAATGGCTATCTTCACAGGTGTGATCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp CTTCCAAGACTCCACAGCAGGCCTGTTGGTGCCTTGCTATGCGAGACGCTGAGCATGACTGAAAACATATaGAACTCCTGCTTCTTAAGG +
Preference number: 4 (lower is better)
Translates to: LPRLHSRPVGALLCETLSMTENI*NSCFLR
Trigger: CCTTAAGAAGCAGGAGTTGCATATGTTTTCAGTCAT...GCTCAGCGTCTCGCATAGCAAGGCACCAACAGGCCTGCTGTGGAGTCTTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR GCA 90 bp CTTCCCTGTGACTTCCAAGAAACGACAAGATCTCTAGCCCATCCATCGGTAAACTTGATGGATCTGGTGTaGGGCCAGGTCAAAGAGGTC +
Preference number: 4 (lower is better)
Translates to: LPCDFQETTRSLAHPSVNLMDLV*GQVKEV
Trigger: GACCTCTTTGACCTGGCCGCACACCAGATCCATCAA...GTTTACCGATGGATGGGCTAGAGATCTTGTCGTTTCTTGGAAGTCACAGGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp GCCAAGGATGCTCAAGCGTTCTCTTCAATCTTCCCTGTGACTTCCAAGAAACGATTGATGGATCTGGTGTaGGGCCAGGTCAAAGAGGTC +
Preference number: 4 (lower is better)
Translates to: AKDAQAFSSIFPVTSKKRLMDLV*GQVKEV
Trigger: GACCTCTTTGACCTGGCCGCACACCAGATCCATCAA...TCGTTTCTTGGAAGTCACAGGGAAGATTGAAGAGAACGCTTGAGCATCCTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp AGAACACGGCTCTTAGAAACCTCATTCCAAATCTCAACACGCCACGTTCAGCCCGTCATCAAAGCCTCCTaGTTCTCACTTAAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: RTRLLETSFQISTRHVQPVIKAS*FSLKGP
Trigger: AGGGCCCTTAAGTGAGAAGCAGGAGGCTTTGATGAC...GGGCTGAACGTGGCGTGTTGAGATTTGGAATGAGGTTTCTAAGAGCCGTGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp AATTCCATGAAGAACACGGCTCTTAGAAACCTCATTCCAAATCTCAACACGCCAGGCGGGCCCAGCACGTaGAGCAACAATTCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: NSMKNTALRNLIPNLNTPGGPST*SNNSAL
Trigger: GAGAGCTGAATTGTTGCTGCACGTGCTGGGCCCGCC...TGGCGTGTTGAGATTTGGAATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp TTTGGTGGGCGAGACCTTGGCCTGAGAACTTTGGTTCACAGGAAGCTTCCCTTGGTATCTATAGTCCCTTaGTGGGTGAGGAACTTTGAC +
Preference number: 4 (lower is better)
Translates to: FGGRDLGLRTLVHRKLPLVSIVP*WVRNFD
Trigger: GTCAAAGTTCCTCACCCAGCAAGGGACTATAGATAC...CAAGGGAAGCTTCCTGTGAACCAAAGTTCTCAGGCCAAGGTCTCGCCCACCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp TTTGGTGGGCGAGACCTTGGCCTGAGAACTTTGGTTCACAGGAAGCTTCCCTTGATCGGTAAACCAAGCTaGCAAGTGGCCTGGAAAATT +
Preference number: 4 (lower is better)
Translates to: FGGRDLGLRTLVHRKLPLIGKPS*QVAWKI
Trigger: AATTTTCCAGGCCACTTGGCAGCTTGGTTTACCGAT...CAAGGGAAGCTTCCTGTGAACCAAAGTTCTCAGGCCAAGGTCTCGCCCACCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp AATTCCATGAAGAACACGGCTCTTAGAAACCTCATTCCAAATCTCAACACGCCACAGAGGCAGCCGAAGTaGCCTCTGGAGAGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: NSMKNTALRNLIPNLNTPQRQPK*PLERKA
Trigger: GGCCTTTCTCTCCAGAGGGCACTTCGGCTGCCTCTG...TGGCGTGTTGAGATTTGGAATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp ACGGAACCTATTCTGTCAGCAAGAGCCGGGCCTCGAATGAGAGGAAGCAGAGGCCATCCTGAGTACCTTTaGAATATTTCCTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: TEPILSARAGPRMRGSRGHPEYL*NISSLW
Trigger: CCACAAAGAGGAAATATTCCAAAGGTACTCAGGATG...GCCTCTGCTTCCTCTCATTCGAGGCCCGGCTCTTGCTGACAGAATAGGTTCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp ATTCCAAATCTCAACACGCCACGTTCAGCCCAAGTTCAGCTTGTGCATTGTGTTTCAAGCTGGGGTTGCTaGGGAAGCCTCCGTAATGGA +
Preference number: 4 (lower is better)
Translates to: IPNLNTPRSAQVQLVHCVSSWGC*GSLRNG
Trigger: TCCATTACGGAGGCTTCCCCAGCAACCCCAGCTTGA...AACACAATGCACAAGCTGAACTTGGGCTGAACGTGGCGTGTTGAGATTTGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp AAACCATGTCTGGATGGCATTGAGTGGCACAGAAGGGATGGGACTGCATATATATGGAGCGGAAGCGCTTaGAGTAGAGCACGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: KPCLDGIEWHRRDGTAYIWSGSA*SRARRS
Trigger: ACTCCTACGTGCTCTACTCCAAGCGCTTCCGCTCCA...TATATATGCAGTCCCATCCCTTCTGTGCCACTCAATGCCATCCAGACATGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp AAGAGGCAGCAGAGAGAGAGCCAGGACTGGTTAAATGCAGAAAGTGGTTTTGTTTGGAGCGGAAGCGCTTaGAGTAGAGCACGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: KRQQRESQDWLNAESGFVWSGSA*SRARRS
Trigger: ACTCCTACGTGCTCTACTCCAAGCGCTTCCGCTCCA...AACAAAACCACTTTCTGCATTTAACCAGTCCTGGCTCTCTCTCTGCTGCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp AAACCATGTCTGGATGGCATTGAGTGGCACAGAAGGGATGGGACTGCATATATAGCTCCTTTGCAGAGCTaGCCTGCAGTCCTTGATGGA +
Preference number: 4 (lower is better)
Translates to: KPCLDGIEWHRRDGTAYIAPLQS*PAVLDG
Trigger: TCCATCAAGGACTGCAGGCCAGCTCTGCAAAGGAGC...TATATATGCAGTCCCATCCCTTCTGTGCCACTCAATGCCATCCAGACATGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp TCTGATGGCAGAAAGACAACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCAGAGTGGCAGAGTCCTaGGGTTTTCCATACCATGAG +
Preference number: 4 (lower is better)
Translates to: SDGRKTTPAERRLNNCRSRVAES*GFPYHE
Trigger: CTCATGGTATGGAAAACCCCAGGACTCTGCCACTCT...GGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTTGTCTTTCTGCCATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp AAACCATGTCTGGATGGCATTGAGTGGCACAGAAGGGATGGGACTGCATATATACTGTGGCATGACCTCTaGCTTGCTGACTCAGAACCC +
Preference number: 4 (lower is better)
Translates to: KPCLDGIEWHRRDGTAYILWHDL*LADSEP
Trigger: GGGTTCTGAGTCAGCAAGCCAGAGGTCATGCCACAG...TATATATGCAGTCCCATCCCTTCTGTGCCACTCAATGCCATCCAGACATGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp ATTCCAAATCTCAACACGCCACGTTCAGCCCAAGTTCAGCTTGTGCATTGTGTTGGTGCTTGCACTTTCTaGCTTTGGTGGGCGAGACCT +
Preference number: 4 (lower is better)
Translates to: IPNLNTPRSAQVQLVHCVGACTF*LWWARP
Trigger: AGGTCTCGCCCACCAAAGCCAGAAAGTGCAAGCACC...AACACAATGCACAAGCTGAACTTGGGCTGAACGTGGCGTGTTGAGATTTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp CATTCCAAATCTCAACACGCCACGTTCAGCCCAAGTTCAGCTTGTGCATTGTGTCCTACCCCCGAAGCCTaGTCTGTCTCACACATACAA +
Preference number: 4 (lower is better)
Translates to: HSKSQHATFSPSSACALCPTPEA*SVSHIQ
Trigger: TTGTATGTGTGAGACAGACCAGGCTTCGGGGGTAGG...ACACAATGCACAAGCTGAACTTGGGCTGAACGTGGCGTGTTGAGATTTGGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp ATTCCAAATCTCAACACGCCACGTTCAGCCCAAGTTCAGCTTGTGCATTGTGTTGACTGTCCCTGCAAGTaGGAGTTCAGGACACACGCT +
Preference number: 4 (lower is better)
Translates to: IPNLNTPRSAQVQLVHCVDCPCK*EFRTHA
Trigger: AGCGTGTGTCCTGAACTCCCACTTGCAGGGACAGTC...AACACAATGCACAAGCTGAACTTGGGCTGAACGTGGCGTGTTGAGATTTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp TCCAATTATAAACTGAAGTTCTTGAGAAAACGTATGAAGAGGCAGCAGAGAGAGGCCAGATTTCCCTGCTaGCGGCTGCTCCCAGTGCCG +
Preference number: 4 (lower is better)
Translates to: SNYKLKFLRKRMKRQQREARFPC*RLLPVP
Trigger: CGGCACTGGGAGCAGCCGCCAGCAGGGAAATCTGGC...CTCTCTCTGCTGCCTCTTCATACGTTTTCTCAAGAACTTCAGTTTATAATTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp CTTCCCTGTGACTTCCAAGAAACGACAAGATCTCTAGCCCATCCATCGGTAAACCTGGATGGCATTGAGTaGCACAGAAGGGATGGGACT +
Preference number: 4 (lower is better)
Translates to: LPCDFQETTRSLAHPSVNLDGIE*HRRDGT
Trigger: AGTCCCATCCCTTCTGTGCCACTCAATGCCATCCAG...GTTTACCGATGGATGGGCTAGAGATCTTGTCGTTTCTTGGAAGTCACAGGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp CTTCCCTGTGACTTCCAAGAAACGACAAGATCTCTAGCCCATCCATCGGTAAACGGAGAGAAAGGCCCCTaGAGGGAAAAACCATGTCTG +
Preference number: 4 (lower is better)
Translates to: LPCDFQETTRSLAHPSVNGEKGP*REKPCL
Trigger: CAGACATGGTTTTTCCCTCCAGGGGCCTTTCTCTCC...GTTTACCGATGGATGGGCTAGAGATCTTGTCGTTTCTTGGAAGTCACAGGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp AGGAATGCAAGACAGACCCATCACAACAGCCTGGTACAGCAGCATTATTACCCCACAGAGGATTGGTGGTaGTGCTCCTTTGTGTCACTT +
Preference number: 4 (lower is better)
Translates to: RNARQTHHNSLVQQHYYPTEDWW*CSFVSL
Trigger: AAGTGACACAAAGGAGCATCACCACCAATCCTCTGT...GGGGTAATAATGCTGCTGTACCAGGCTGTTGTGATGGGTCTGTCTTGCATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR TCA 90 bp TTTGGTGGGCGAGACCTTGGCCTGAGAACTTTGGTTCACAGGAAGCTTCCCTTGTTTGTTGGGGATGACTaGAAACATATGCAACTCCTG +
Preference number: 4 (lower is better)
Translates to: FGGRDLGLRTLVHRKLPLFVGDD*KHMQLL
Trigger: CAGGAGTTGCATATGTTTTCAGTCATCCCCAACAAA...CAAGGGAAGCTTCCTGTGAACCAAAGTTCTCAGGCCAAGGTCTCGCCCACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp CTCGCGTTAGTCTTTTATTATAGGTGCCTCAGCCATGAACACAGTAGTGAGATAACTTGGGCTGCCCTATaGTGTAGAAGTGCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LALVFYYRCLSHEHSSEITWAAL*CRSAAG
Trigger: GCCTGCCGCACTTCTACATCATAGGGCAGCCCAAGT...TATCTCACTACTGTGTTCATGGCTGAGGCACCTATAATAAAAGACTAACGCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR TCA 90 bp ACTTCTGTAAGAAGCAGAATTACACCACATGTTATTCACATGCATAGGAGTGCACTGGCCTGCAGTCCTTaGTGGATCTGGTGTGCGGCC +
Preference number: 4 (lower is better)
Translates to: TSVRSRITPHVIHMHRSALACSP*WIWCAA
Trigger: GGCCGCACACCAGATCCATCAAGGACTGCAGGCCAG...TGCACTCCTATGCATGTGAATAACATGTGGTGTAATTCTGCTTCTTACAGAAGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp CTTCCCTGTGACTTCCAAGAAACGACAAGATCTCTAGCCCATCCATCGGTAAACGACGCAGGCGCGCAGTaGATAATCAAGCATGCAATT +
Preference number: 4 (lower is better)
Translates to: LPCDFQETTRSLAHPSVNDAGAQ*IIKHAI
Trigger: AATTGCATGCTTGATTATTCACTGCGCGCCTGCGTC...GTTTACCGATGGATGGGCTAGAGATCTTGTCGTTTCTTGGAAGTCACAGGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp TCTGATGGCAGAAAGACAACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCGCAGAGCTGAATTCTTaGGAAACTGGGGTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: SDGRKTTPAERRLNNCRSAELNS*ETGVSN
Trigger: ATTGGAGACCCCAGTTTCTCAAGAATTCAGCTCTGC...GGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTTGTCTTTCTGCCATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp CCCCGCAAAGAGATTTGTAAAATCCTGATGATGACGGCATTGGCGGGCCCAGCAAGAGTGTTTCAGAAGTaGATGTGGTATGATCACACC +
Preference number: 4 (lower is better)
Translates to: PRKEICKILMMTALAGPARVFQK*MWYDHT
Trigger: GGTGTGATCATACCACATTCACTTCTGAAACACTCT...TGCTGGGCCCGCCAATGCCGTCATCATCAGGATTTTACAAATCTCTTTGCGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp TCATTAGCAACTGAACAGAACCCACTCAGAAGACGCACTCACCCACACGTGCGCAAGTGTTCAATTCCTTaGGGTTGCTCATTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: SLATEQNPLRRRTHPHVRKCSIP*GCSFWH
Trigger: ATGCCAGAATGAGCAACCTCAAGGAATTGAACACTT...GCGCACGTGTGGGTGAGTGCGTCTTCTGAGTGGGTTCTGTTCAGTTGCTAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp CAGAGCAGAGCTGAATTCTTGAGAAACTGGGGTCTCCAATGGCCTCGGATAGAGCTTCAATCTTCCCTGTaGCTTCCAAGAAACGACAAG +
Preference number: 4 (lower is better)
Translates to: QSRAEFLRNWGLQWPRIELQSSL*LPRNDK
Trigger: CTTGTCGTTTCTTGGAAGTCACAGGGAAGATTGAAG...CTCTATCCGAGGCCATTGGAGACCCCAGTTTCTCAAGAATTCAGCTCTGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp CAGAGCAGAGCTGAATTCTTGAGAAACTGGGGTCTCCAATGGCCTCGGATAGAGTCCCTTGACAATACTTaGGTGCAAAGCTTCATCCAG +
Preference number: 4 (lower is better)
Translates to: QSRAEFLRNWGLQWPRIESLDNT*VQSFIQ
Trigger: CTGGATGAAGCTTTGCACTCAAGTATTGTCAAGGGA...CTCTATCCGAGGCCATTGGAGACCCCAGTTTCTCAAGAATTCAGCTCTGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp TTTGGAATTGGGACACGAGTATCTATAGTCCCTTGCTGGGTGAGGAACTTTGACCAGCAGAAAGACGGCTaGACAACTGCAGATCCTCCT +
Preference number: 4 (lower is better)
Translates to: FGIGTRVSIVPCWVRNFDQQKDG*TTADPP
Trigger: AGGAGGATCTGCAGTTGTTCAGCCGTCTTTCTGCTG...GTCAAAGTTCCTCACCCAGCAAGGGACTATAGATACTCGTGTCCCAATTCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp CATTCCAAATCTCAACACGCCACGTTCAGCCCAAGTTCAGCTTGTGCATTGTGTTGTGTGTCCCTTCTCTaGTGGCAGAAAGACAACACC +
Preference number: 4 (lower is better)
Translates to: HSKSQHATFSPSSACALCCVSLL*WQKDNT
Trigger: GGTGTTGTCTTTCTGCCATCAGAGAAGGGACACACA...ACACAATGCACAAGCTGAACTTGGGCTGAACGTGGCGTGTTGAGATTTGGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp GACAAGATCTCTAGCCCATCCATCGGTAAACCAAGCTGCCAAGTGGCCTGGAAAGCAAGCAAGTTCATCTaGTTACTGTCCACACGAAAC +
Preference number: 4 (lower is better)
Translates to: DKISSPSIGKPSCQVAWKASKFI*LLSTRN
Trigger: GTTTCGTGTGGACAGTAAGCAGATGAACTTGCTTGC...TTTCCAGGCCACTTGGCAGCTTGGTTTACCGATGGATGGGCTAGAGATCTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp GCCAAGGATGCTCAAGCGTTCTCTTCAATCTTCCCTGTGACTTCCAAGAAACGAGTATTCATCTTGCTCTaGTCCTTTGCAGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: AKDAQAFSSIFPVTSKKRVFILL*SFAELA
Trigger: GGCCAGCTCTGCAAAGGAGCAGAGCAAGATGAATAC...TCGTTTCTTGGAAGTCACAGGGAAGATTGAAGAGAACGCTTGAGCATCCTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp ACTTCTGTAAGAAGCAGAATTACACCACATGTTATTCACATGCATAGGAGTGCATGCAGGCCAGCTGGCTaGATCCCCAAGCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: TSVRSRITPHVIHMHRSACRPAG*IPKLQD
Trigger: GTCCTGGAGCTTGGGGATGCAGCCAGCTGGCCTGCA...TGCACTCCTATGCATGTGAATAACATGTGGTGTAATTCTGCTTCTTACAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp ACGGAACCTATTCTGTCAGCAAGAGCCGGGCCTCGAATGAGAGGAAGCAGAGGCCCAGGACTGGTTAAATaGAGAAAGTGGTTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: TEPILSARAGPRMRGSRGPGLVK*RKWFCF
Trigger: AAAACAAAACCACTTTCTGCATTTAACCAGTCCTGG...GCCTCTGCTTCCTCTCATTCGAGGCCCGGCTCTTGCTGACAGAATAGGTTCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp CCATTGCTGAGCTCTCGAACATCACGAAGGAAATTCCAAAATGGTTATAATTCAGCAGGGCGTCGAAGGTaGAGCGGAAGCGCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: PLLSSRTSRRKFQNGYNSAGRRR*SGSAWS
Trigger: ACTCCAAGCGCTTCCGCTCCACCTTCGACGCCCTGC...TGAATTATAACCATTTTGGAATTTCCTTCGTGATGTTCGAGAGCTCAGCAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp GACAAGATCTCTAGCCCATCCATCGGTAAACCAAGCTGCCAAGTGGCCTGGAAAAATCAGTCTGGCATTTaGCTGAAAGGCGTGGATGAA +
Preference number: 4 (lower is better)
Translates to: DKISSPSIGKPSCQVAWKNQSGI*LKGVDE
Trigger: TTCATCCACGCCTTTCAGCCAAATGCCAGACTGATT...TTTCCAGGCCACTTGGCAGCTTGGTTTACCGATGGATGGGCTAGAGATCTTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp CTGCCAAGTGGCCTGGAAAATTCCATGAAGAACACGGCTCTTAGAAACCTCATTTGGTGGGCGAGACCTTaGCCTGAGAACTTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: LPSGLENSMKNTALRNLIWWARP*PENFGS
Trigger: TGAACCAAAGTTCTCAGGCCAAGGTCTCGCCCACCA...AATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATTTTCCAGGCCACTTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp CTCGCGTTAGTCTTTTATTATAGGTGCCTCAGCCATGAACACAGTAGTGAGATATGTACTCCTCCTACCTaGCACCAGAGCAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LALVFYYRCLSHEHSSEICTPPT*HQSRLW
Trigger: CCAGAGCCTGCTCTGGTGCCAGGTAGGAGGAGTACA...TATCTCACTACTGTGTTCATGGCTGAGGCACCTATAATAAAAGACTAACGCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR TCA 90 bp CATTCCAAATCTCAACACGCCACGTTCAGCCCAAGTTCAGCTTGTGCATTGTGTTCATGGTCTTCTCATTaGTGGATGGATTGCCATGCC +
Preference number: 4 (lower is better)
Translates to: HSKSQHATFSPSSACALCSWSSH*WMDCHA
Trigger: GGCATGGCAATCCATCCATCAATGAGAAGACCATGA...ACACAATGCACAAGCTGAACTTGGGCTGAACGTGGCGTGTTGAGATTTGGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp AACTCTCCTTCAGGCCTCAGCACAGACATTCCCTCTCCTAAGAACCTGCCTGAATTTGTTGGGGATGACTaGAAACATATGCAACTCCTG +
Preference number: 4 (lower is better)
Translates to: NSPSGLSTDIPSPKNLPEFVGDD*KHMQLL
Trigger: CAGGAGTTGCATATGTTTTCAGTCATCCCCAACAAA...TTCAGGCAGGTTCTTAGGAGAGGGAATGTCTGTGCTGAGGCCTGAAGGAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR TCA 90 bp TCTGATGGCAGAAAGACAACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCAAAGTAGAGATAGTCTaGGTACAACCTCTCCACAGG +
Preference number: 4 (lower is better)
Translates to: SDGRKTTPAERRLNNCRSKVEIV*VQPLHR
Trigger: CCTGTGGAGAGGTTGTACTCAGACTATCTCTACTTT...GGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTTGTCTTTCTGCCATCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp ATGATCACACCTGTGAAGATAGCCATTGAATACAGACAGTCTGTGCAACACGGCGCTTGTCAAAAACGCTaGGCCAGTCCAGAAGGTACA +
Preference number: 4 (lower is better)
Translates to: MITPVKIAIEYRQSVQHGACQKR*ASPEGT
Trigger: TGTACCTTCTGGACTGGCTCAGCGTTTTTGACAAGC...GCCGTGTTGCACAGACTGTCTGTATTCAATGGCTATCTTCACAGGTGTGATCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp GCCAAGGATGCTCAAGCGTTCTCTTCAATCTTCCCTGTGACTTCCAAGAAACGAAACAGGGTTTACATCTaGAGAAACTGGAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: AKDAQAFSSIFPVTSKKRNRVYI*RNWRAE
Trigger: CTCAGCCCTCCAGTTTCTTCAGATGTAAACCCTGTT...TCGTTTCTTGGAAGTCACAGGGAAGATTGAAGAGAACGCTTGAGCATCCTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp TCTGATGGCAGAAAGACAACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCTCCCTTGACAATACTTaGGTGCAAAGCTTCATCCAG +
Preference number: 4 (lower is better)
Translates to: SDGRKTTPAERRLNNCRSSLDNT*VQSFIQ
Trigger: CTGGATGAAGCTTTGCACTCAAGTATTGTCAAGGGA...GGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTTGTCTTTCTGCCATCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp AGAACACGGCTCTTAGAAACCTCATTCCAAATCTCAACACGCCACGTTCAGCCCACAGGAAGCTTCCCTTaGCAATACTTGAGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: RTRLLETSFQISTRHVQPTGSFP*QYLSAK
Trigger: CTTTGCACTCAAGTATTGTCAAGGGAAGCTTCCTGT...GGGCTGAACGTGGCGTGTTGAGATTTGGAATGAGGTTTCTAAGAGCCGTGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp CAGAGCAGAGCTGAATTCTTGAGAAACTGGGGTCTCCAATGGCCTCGGATAGAGTTCAAACAGCTGCAGTaGTTCTGTCACTTTCTCATG +
Preference number: 4 (lower is better)
Translates to: QSRAEFLRNWGLQWPRIEFKQLQ*FCHFLM
Trigger: CATGAGAAAGTGACAGAAGCACTGCAGCTGTTTGAA...CTCTATCCGAGGCCATTGGAGACCCCAGTTTCTCAAGAATTCAGCTCTGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp CAGAGCAGAGCTGAATTCTTGAGAAACTGGGGTCTCCAATGGCCTCGGATAGAGGTTATAATTCATGTGTaGCTAGAGTGGCAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: QSRAEFLRNWGLQWPRIEVIIHV*LEWQSP
Trigger: AGGACTCTGCCACTCTAGGCACACATGAATTATAAC...CTCTATCCGAGGCCATTGGAGACCCCAGTTTCTCAAGAATTCAGCTCTGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp TTTGGAATTGGGACACGAGTATCTATAGTCCCTTGCTGGGTGAGGAACTTTGACCCTAAAGCATCCTTGTaGTCAGGCCAGATTTCCCTG +
Preference number: 4 (lower is better)
Translates to: FGIGTRVSIVPCWVRNFDPKASL*SGQISL
Trigger: CAGGGAAATCTGGCCTGAGCACAAGGATGCTTTAGG...GTCAAAGTTCCTCACCCAGCAAGGGACTATAGATACTCGTGTCCCAATTCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp AACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCTCCTACCCCCGAAGCCTCCATGTTGTGAGAAATaGTCCAATTTGCTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: NTSRKTAEQLQILLPPKPPCCEK*SNLLWF
Trigger: AAACCAAAGCAAATTGGAGCATTTCTCACAACATGG...AGGCTTCGGGGGTAGGAGGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp TGGAAACCTGACCCACACCAATGGCTGGTTCCAAAGTGTACTCCTCCTACCTGGCATCCTGAGTACCTTTaGAATATTTCCTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: WKPDPHQWLVPKCTPPTWHPEYL*NISSLW
Trigger: CCACAAAGAGGAAATATTCCAAAGGTACTCAGGATG...CCAGGTAGGAGGAGTACACTTTGGAACCAGCCATTGGTGTGGGTCAGGTTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CCA 90 bp CAGAGCAGAGCTGAATTCTTGAGAAACTGGGGTCTCCAATGGCCTCGGATAGAGAGGGTGCACATTCTTTaGTTCAGCTCCGAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: QSRAEFLRNWGLQWPRIERVHIL*FSSERK
Trigger: TTTTCTTTCGGAGCTGAACCAAAGAATGTGCACCCT...CTCTATCCGAGGCCATTGGAGACCCCAGTTTCTCAAGAATTCAGCTCTGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp TTAGTCTTTTATTATAGGTGCCTCAGCCATGAACACAGTAGTGAGATATTCCTTGTAGTGCCAGTGCCCTaGGCTGCTGGCTTACCGAGC +
Preference number: 4 (lower is better)
Translates to: LVFYYRCLSHEHSSEIFLVVPVP*AAGLPS
Trigger: GCTCGGTAAGCCAGCAGCCCAGGGCACTGGCACTAC...AAGGAATATCTCACTACTGTGTTCATGGCTGAGGCACCTATAATAAAAGACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CCA 90 bp AGGAATGCAAGACAGACCCATCACAACAGCCTGGTACAGCAGCATTATTACCCCTCTGTCACTTTCTCATaGAAGTCGTCCGCGGATTTA +
Preference number: 4 (lower is better)
Translates to: RNARQTHHNSLVQQHYYPSVTFS*KSSADL
Trigger: TAAATCCGCGGACGACTTCCATGAGAAAGTGACAGA...GGGGTAATAATGCTGCTGTACCAGGCTGTTGTGATGGGTCTGTCTTGCATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CCA 90 bp AAGAGGCAGCAGAGAGAGAGCCAGGACTGGTTAAATGCAGAAAGTGGTTTTGTTGAATTCTTGAGAAACTaGGGTCTCCAATGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: KRQQRESQDWLNAESGFVEFLRN*GLQWPR
Trigger: CCGAGGCCATTGGAGACCCCAGTTTCTCAAGAATTC...AACAAAACCACTTTCTGCATTTAACCAGTCCTGGCTCTCTCTCTGCTGCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp CTGCCAAGTGGCCTGGAAAATTCCATGAAGAACACGGCTCTTAGAAACCTCATTGAATTCTTGAGAAACTaGGGTCTCCAATGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: LPSGLENSMKNTALRNLIEFLRN*GLQWPR
Trigger: CCGAGGCCATTGGAGACCCCAGTTTCTCAAGAATTC...AATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATTTTCCAGGCCACTTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp TCCAATTATAAACTGAAGTTCTTGAGAAAACGTATGAAGAGGCAGCAGAGAGAGAGCCGAAGTGCCCTCTaGAGAGAAAGGCCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SNYKLKFLRKRMKRQQRESRSAL*RERPLE
Trigger: CTCCAGGGGCCTTTCTCTCCAGAGGGCACTTCGGCT...CTCTCTCTGCTGCCTCTTCATACGTTTTCTCAAGAACTTCAGTTTATAATTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp TCTGATGGCAGAAAGACAACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCCTTAAGAATGCCTTGTaGTCACAGAAGATGGATGGA +
Preference number: 4 (lower is better)
Translates to: SDGRKTTPAERRLNNCRSLKNAL*SQKMDG
Trigger: TCCATCCATCTTCTGTGATCACAAGGCATTCTTAAG...GGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTTGTCTTTCTGCCATCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp AGAACACGGCTCTTAGAAACCTCATTCCAAATCTCAACACGCCACGTTCAGCCCTTTGTTGGGGATGACTaGAAACATATGCAACTCCTG +
Preference number: 4 (lower is better)
Translates to: RTRLLETSFQISTRHVQPFVGDD*KHMQLL
Trigger: CAGGAGTTGCATATGTTTTCAGTCATCCCCAACAAA...GGGCTGAACGTGGCGTGTTGAGATTTGGAATGAGGTTTCTAAGAGCCGTGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp CTGCCAAGTGGCCTGGAAAATTCCATGAAGAACACGGCTCTTAGAAACCTCATTTTGACGTTGGATGCATaGTCTTCCAGGCGAAGAATG +
Preference number: 4 (lower is better)
Translates to: LPSGLENSMKNTALRNLILTLDA*SSRRRM
Trigger: CATTCTTCGCCTGGAAGATCATGCATCCAACGTCAA...AATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATTTTCCAGGCCACTTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp AAACCATGTCTGGATGGCATTGAGTGGCACAGAAGGGATGGGACTGCATATATATTGACGTTGGATGCATaGTCTTCCAGGCGAAGAATG +
Preference number: 4 (lower is better)
Translates to: KPCLDGIEWHRRDGTAYILTLDA*SSRRRM
Trigger: CATTCTTCGCCTGGAAGATCATGCATCCAACGTCAA...TATATATGCAGTCCCATCCCTTCTGTGCCACTCAATGCCATCCAGACATGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp CCATTGCTGAGCTCTCGAACATCACGAAGGAAATTCCAAAATGGTTATAATTCAGCAGAATCTTCTGTGTaGTGGGCCACATGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PLLSSRTSRRKFQNGYNSAESSV*WATWAP
Trigger: TGGGGCCCATGTGGCCCATCACACAGAAGATTCTGC...TGAATTATAACCATTTTGGAATTTCCTTCGTGATGTTCGAGAGCTCAGCAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp ATGATCACACCTGTGAAGATAGCCATTGAATACAGACAGTCTGTGCAACACGGCAGGAGGTCAGAAAGATaGAGGTGCTGCCAAAAACTG +
Preference number: 4 (lower is better)
Translates to: MITPVKIAIEYRQSVQHGRRSER*RCCQKL
Trigger: CAGTTTTTGGCAGCACCTTCATCTTTCTGACCTCCT...GCCGTGTTGCACAGACTGTCTGTATTCAATGGCTATCTTCACAGGTGTGATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp GCCAAGGATGCTCAAGCGTTCTCTTCAATCTTCCCTGTGACTTCCAAGAAACGACTTCAATCTTCCCTGTaGCTTCCAAGAAACGACAAG +
Preference number: 4 (lower is better)
Translates to: AKDAQAFSSIFPVTSKKRLQSSL*LPRNDK
Trigger: CTTGTCGTTTCTTGGAAGTCACAGGGAAGATTGAAG...TCGTTTCTTGGAAGTCACAGGGAAGATTGAAGAGAACGCTTGAGCATCCTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp CTTCCCTGTGACTTCCAAGAAACGACAAGATCTCTAGCCCATCCATCGGTAAACACAGGAAGCTTCCCTTaGCAATACTTGAGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LPCDFQETTRSLAHPSVNTGSFP*QYLSAK
Trigger: CTTTGCACTCAAGTATTGTCAAGGGAAGCTTCCTGT...GTTTACCGATGGATGGGCTAGAGATCTTGTCGTTTCTTGGAAGTCACAGGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp ATGATCACACCTGTGAAGATAGCCATTGAATACAGACAGTCTGTGCAACACGGCACACACACACTGAAGTaGTCTCTCCCTAAAGCATCC +
Preference number: 4 (lower is better)
Translates to: MITPVKIAIEYRQSVQHGTHTLK*SLPKAS
Trigger: GGATGCTTTAGGGAGAGATCACTTCAGTGTGTGTGT...GCCGTGTTGCACAGACTGTCTGTATTCAATGGCTATCTTCACAGGTGTGATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp GCCAAGGATGCTCAAGCGTTCTCTTCAATCTTCCCTGTGACTTCCAAGAAACGAAATTTGCTTTGGTTTTaGATGGCAGGCTCGAGAACC +
Preference number: 4 (lower is better)
Translates to: AKDAQAFSSIFPVTSKKRNLLWF*MAGSRT
Trigger: GGTTCTCGAGCCTGCCATTCAAAACCAAAGCAAATT...TCGTTTCTTGGAAGTCACAGGGAAGATTGAAGAGAACGCTTGAGCATCCTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp TTTGGTGGGCGAGACCTTGGCCTGAGAACTTTGGTTCACAGGAAGCTTCCCTTGTTCAATACCATGTTGTaGGAAATGCTCCAATTTGCT +
Preference number: 4 (lower is better)
Translates to: FGGRDLGLRTLVHRKLPLFNTML*EMLQFA
Trigger: AGCAAATTGGAGCATTTCTCACAACATGGTATTGAA...CAAGGGAAGCTTCCTGTGAACCAAAGTTCTCAGGCCAAGGTCTCGCCCACCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp CCATTGCTGAGCTCTCGAACATCACGAAGGAAATTCCAAAATGGTTATAATTCACTTGCTCTGCTCCTTTaGAGAGCTGGCCTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: PLLSSRTSRRKFQNGYNSLALLL*RAGLQS
Trigger: GGACTGCAGGCCAGCTCTGCAAAGGAGCAGAGCAAG...TGAATTATAACCATTTTGGAATTTCCTTCGTGATGTTCGAGAGCTCAGCAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp ATGATCACACCTGTGAAGATAGCCATTGAATACAGACAGTCTGTGCAACACGGCGTACTTGACGTTGGATaGATGATCTTCCAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: MITPVKIAIEYRQSVQHGVLDVG*MIFQAK
Trigger: CTTCGCCTGGAAGATCATGCATCCAACGTCAAGTAC...GCCGTGTTGCACAGACTGTCTGTATTCAATGGCTATCTTCACAGGTGTGATCAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp ATGATCACACCTGTGAAGATAGCCATTGAATACAGACAGTCTGTGCAACACGGCGGCTGTTGCCAAGGATaGTCAAGCGTTCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: MITPVKIAIEYRQSVQHGGCCQG*SSVLFN
Trigger: ATTGAAGAGAACGCTTGAGCATCCTTGGCAACAGCC...GCCGTGTTGCACAGACTGTCTGTATTCAATGGCTATCTTCACAGGTGTGATCAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp TCTGATGGCAGAAAGACAACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCTTGACAATACTTGAGTaGAAAGCTTCATCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SDGRKTTPAERRLNNCRSLTILE*KASSRS
Trigger: GGACCTGGATGAAGCTTTGCACTCAAGTATTGTCAA...GGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTTGTCTTTCTGCCATCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp CTTCCCTGTGACTTCCAAGAAACGACAAGATCTCTAGCCCATCCATCGGTAAACCTCCTTTGTGTCACTTaGGTTTTCGCTGTCCATCAA +
Preference number: 4 (lower is better)
Translates to: LPCDFQETTRSLAHPSVNLLCVT*VFAVHQ
Trigger: TTGATGGACAGCGAAAACCCAAGTGACACAAAGGAG...GTTTACCGATGGATGGGCTAGAGATCTTGTCGTTTCTTGGAAGTCACAGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp TCCAATTATAAACTGAAGTTCTTGAGAAAACGTATGAAGAGGCAGCAGAGAGAGCTGCGTCAGAAACGGTaGCTCGCCATCCGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: SNYKLKFLRKRMKRQQRELRQKR*LAIRAV
Trigger: AACAGCACGGATGGCGAGCCACCGTTTCTGACGCAG...CTCTCTCTGCTGCCTCTTCATACGTTTTCTCAAGAACTTCAGTTTATAATTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp AAGAGGCAGCAGAGAGAGAGCCAGGACTGGTTAAATGCAGAAAGTGGTTTTGTTTCTATAGTCCCTTGCTaGGTGAGGAACTTTGACCAC +
Preference number: 4 (lower is better)
Translates to: KRQQRESQDWLNAESGFVSIVPC*VRNFDH
Trigger: GTGGTCAAAGTTCCTCACCCAGCAAGGGACTATAGA...AACAAAACCACTTTCTGCATTTAACCAGTCCTGGCTCTCTCTCTGCTGCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
3UTR CAA 72 bp CAACACGCCACGTTCAGCCCAAGTTCAGCTTGTGCATaGTGTTTTGGAATTGGGACACGAGTATCTATAGTC +
Preference number: 4 (lower is better)
Translates to: QHATFSPSSACA*CFGIGTRVSIV
Trigger: GACTATAGATACTCGTGTCCCAATTCCAAAACACAATGCACAAGCTGAACTTGGGCTGAACGTGGCGTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp ACTATCTTCTGCTTAAAACCCTCTGAGGGGTCCCATCTCTCTCAGGGTGATGTCTCCCCTTTTACATCCTaGGTACCTTTGGAATATTTC +
Preference number: 4 (lower is better)
Translates to: TIFCLKPSEGSHLSQGDVSPFTS*VPLEYF
Trigger: GAAATATTCCAAAGGTACTCAGGATGTAAAAGGGGA...GACATCACCCTGAGAGAGATGGGACCCCTCAGAGGGTTTTAAGCAGAAGATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR TCA 90 bp CTGCCAAGTGGCCTGGAAAATTCCATGAAGAACACGGCTCTTAGAAACCTCATTAAGAAACTGGAGGGCTaGGTTTGGAGTAAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LPSGLENSMKNTALRNLIKKLEG*VWSKGE
Trigger: TTCTCCTTTACTCCAAACTCAGCCCTCCAGTTTCTT...AATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATTTTCCAGGCCACTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp ACTTCTGTAAGAAGCAGAATTACACCACATGTTATTCACATGCATAGGAGTGCAGTTCGGGAGCAGCTCTaGCTGCCCTTCAGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: TSVRSRITPHVIHMHRSAVREQL*LPFRFF
Trigger: GAAAAACCTGAAGGGCAGGCAGAGCTGCTCCCGAAC...TGCACTCCTATGCATGTGAATAACATGTGGTGTAATTCTGCTTCTTACAGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp TTTGGAATTGGGACACGAGTATCTATAGTCCCTTGCTGGGTGAGGAACTTTGACGCAAGCAAGTTCATCTaGTTACTGTCCACACGAAAC +
Preference number: 4 (lower is better)
Translates to: FGIGTRVSIVPCWVRNFDASKFI*LLSTRN
Trigger: GTTTCGTGTGGACAGTAAGCAGATGAACTTGCTTGC...GTCAAAGTTCCTCACCCAGCAAGGGACTATAGATACTCGTGTCCCAATTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp CAGAGCAGAGCTGAATTCTTGAGAAACTGGGGTCTCCAATGGCCTCGGATAGAGATGACTGAAAACATATaGAACTCCTGCTTCTTAAGG +
Preference number: 4 (lower is better)
Translates to: QSRAEFLRNWGLQWPRIEMTENI*NSCFLR
Trigger: CCTTAAGAAGCAGGAGTTGCATATGTTTTCAGTCAT...CTCTATCCGAGGCCATTGGAGACCCCAGTTTCTCAAGAATTCAGCTCTGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp ACTTCTGTAAGAAGCAGAATTACACCACATGTTATTCACATGCATAGGAGTGCAGTGGCTCGCCATCCGTaGTGTTGTCGTAGAAGAACG +
Preference number: 4 (lower is better)
Translates to: TSVRSRITPHVIHMHRSAVARHP*CCRRRT
Trigger: CGTTCTTCTACGACAACAGCACGGATGGCGAGCCAC...TGCACTCCTATGCATGTGAATAACATGTGGTGTAATTCTGCTTCTTACAGAAGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp TCTGATGGCAGAAAGACAACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCAGAATGAGAAACTGTTaGTTGTCAAAAACGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SDGRKTTPAERRLNNCRSRMRNC*LSKTLS
Trigger: GCTCAGCGTTTTTGACAAGCAACAGTTTCTCATTCT...GGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTTGTCTTTCTGCCATCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp CAGAGCAGAGCTGAATTCTTGAGAAACTGGGGTCTCCAATGGCCTCGGATAGAGCCAGGACTGGTTAAATaGAGAAAGTGGTTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: QSRAEFLRNWGLQWPRIEPGLVK*RKWFCF
Trigger: AAAACAAAACCACTTTCTGCATTTAACCAGTCCTGG...CTCTATCCGAGGCCATTGGAGACCCCAGTTTCTCAAGAATTCAGCTCTGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp TTTGGAATTGGGACACGAGTATCTATAGTCCCTTGCTGGGTGAGGAACTTTGACATCGGTAAACCAAGCTaGCAAGTGGCCTGGAAAATT +
Preference number: 4 (lower is better)
Translates to: FGIGTRVSIVPCWVRNFDIGKPS*QVAWKI
Trigger: AATTTTCCAGGCCACTTGGCAGCTTGGTTTACCGAT...GTCAAAGTTCCTCACCCAGCAAGGGACTATAGATACTCGTGTCCCAATTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp ACTTCTGTAAGAAGCAGAATTACACCACATGTTATTCACATGCATAGGAGTGCATCCCACCTGGGCTGTTaGCAAGGATGCTCAAGCGTT +
Preference number: 4 (lower is better)
Translates to: TSVRSRITPHVIHMHRSASHLGC*QGCSSV
Trigger: AACGCTTGAGCATCCTTGGCAACAGCCCAGGTGGGA...TGCACTCCTATGCATGTGAATAACATGTGGTGTAATTCTGCTTCTTACAGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp CAGAGCAGAGCTGAATTCTTGAGAAACTGGGGTCTCCAATGGCCTCGGATAGAGAGAAATGCTCCAATTTaGTTTGGTTTTGAATGGCAG +
Preference number: 4 (lower is better)
Translates to: QSRAEFLRNWGLQWPRIERNAPI*FGFEWQ
Trigger: CTGCCATTCAAAACCAAAGCAAATTGGAGCATTTCT...CTCTATCCGAGGCCATTGGAGACCCCAGTTTCTCAAGAATTCAGCTCTGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp GACAAGATCTCTAGCCCATCCATCGGTAAACCAAGCTGCCAAGTGGCCTGGAAAAAAGTACAGCGTAACTaGGATTCACTTAACATACCT +
Preference number: 4 (lower is better)
Translates to: DKISSPSIGKPSCQVAWKKVQRN*DSLNIP
Trigger: AGGTATGTTAAGTGAATCGCAGTTACGCTGTACTTT...TTTCCAGGCCACTTGGCAGCTTGGTTTACCGATGGATGGGCTAGAGATCTTGTC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp TTAGTCTTTTATTATAGGTGCCTCAGCCATGAACACAGTAGTGAGATATTCCTTAACACGCAGCGGCAATaGTCGCTGCATAAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: LVFYYRCLSHEHSSEIFLNTQRQ*SLHKPC
Trigger: GCAGGGCTTATGCAGCGAGCATTGCCGCTGCGTGTT...AAGGAATATCTCACTACTGTGTTCATGGCTGAGGCACCTATAATAAAAGACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CCA 90 bp GCCAAGGATGCTCAAGCGTTCTCTTCAATCTTCCCTGTGACTTCCAAGAAACGATGGAAGAATTCTCACTaGGGAATGTGGAAACACACA +
Preference number: 4 (lower is better)
Translates to: AKDAQAFSSIFPVTSKKRWKNSH*GMWKHT
Trigger: TGTGTGTTTCCACATTCCCCAGTGAGAATTCTTCCA...TCGTTTCTTGGAAGTCACAGGGAAGATTGAAGAGAACGCTTGAGCATCCTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp TCCAATTATAAACTGAAGTTCTTGAGAAAACGTATGAAGAGGCAGCAGAGAGAGGCTCCTTTGCAGAGCTaGCCTGCAGTCCTTGATGGA +
Preference number: 4 (lower is better)
Translates to: SNYKLKFLRKRMKRQQREAPLQS*PAVLDG
Trigger: TCCATCAAGGACTGCAGGCCAGCTCTGCAAAGGAGC...CTCTCTCTGCTGCCTCTTCATACGTTTTCTCAAGAACTTCAGTTTATAATTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp AAACCATGTCTGGATGGCATTGAGTGGCACAGAAGGGATGGGACTGCATATATAAATCAGTCTGGCATTTaGCTGAAAGGCGTGGATGAA +
Preference number: 4 (lower is better)
Translates to: KPCLDGIEWHRRDGTAYINQSGI*LKGVDE
Trigger: TTCATCCACGCCTTTCAGCCAAATGCCAGACTGATT...TATATATGCAGTCCCATCCCTTCTGTGCCACTCAATGCCATCCAGACATGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp CCATTGCTGAGCTCTCGAACATCACGAAGGAAATTCCAAAATGGTTATAATTCACTGTGGCATGACCTCTaGCTTGCTGACTCAGAACCC +
Preference number: 4 (lower is better)
Translates to: PLLSSRTSRRKFQNGYNSLWHDL*LADSEP
Trigger: GGGTTCTGAGTCAGCAAGCCAGAGGTCATGCCACAG...TGAATTATAACCATTTTGGAATTTCCTTCGTGATGTTCGAGAGCTCAGCAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp ATGATCACACCTGTGAAGATAGCCATTGAATACAGACAGTCTGTGCAACACGGCAGAGAGAGCCAGGACTaGTTAAATGCAGAAAGTGGT +
Preference number: 4 (lower is better)
Translates to: MITPVKIAIEYRQSVQHGRESQD*LNAESG
Trigger: ACCACTTTCTGCATTTAACCAGTCCTGGCTCTCTCT...GCCGTGTTGCACAGACTGTCTGTATTCAATGGCTATCTTCACAGGTGTGATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp CTGCCAAGTGGCCTGGAAAATTCCATGAAGAACACGGCTCTTAGAAACCTCATTAGAGAGAGCCAGGACTaGTTAAATGCAGAAAGTGGT +
Preference number: 4 (lower is better)
Translates to: LPSGLENSMKNTALRNLIRESQD*LNAESG
Trigger: ACCACTTTCTGCATTTAACCAGTCCTGGCTCTCTCT...AATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATTTTCCAGGCCACTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp ATTCCAAATCTCAACACGCCACGTTCAGCCCAAGTTCAGCTTGTGCATTGTGTTAACCAAGCTGCCAAGTaGCCTGGAAAATTCCATGAA +
Preference number: 4 (lower is better)
Translates to: IPNLNTPRSAQVQLVHCVNQAAK*PGKFHE
Trigger: TTCATGGAATTTTCCAGGCCACTTGGCAGCTTGGTT...AACACAATGCACAAGCTGAACTTGGGCTGAACGTGGCGTGTTGAGATTTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp ACTTCTGTAAGAAGCAGAATTACACCACATGTTATTCACATGCATAGGAGTGCAGACTGTCCCTGCAAGTaGGAGTTCAGGACACACGCT +
Preference number: 4 (lower is better)
Translates to: TSVRSRITPHVIHMHRSADCPCK*EFRTHA
Trigger: AGCGTGTGTCCTGAACTCCCACTTGCAGGGACAGTC...TGCACTCCTATGCATGTGAATAACATGTGGTGTAATTCTGCTTCTTACAGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp CTGCCAAGTGGCCTGGAAAATTCCATGAAGAACACGGCTCTTAGAAACCTCATTCTTAAGAATGCCTTGTaGTCACAGAAGATGGATGGA +
Preference number: 4 (lower is better)
Translates to: LPSGLENSMKNTALRNLILKNAL*SQKMDG
Trigger: TCCATCCATCTTCTGTGATCACAAGGCATTCTTAAG...AATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATTTTCCAGGCCACTTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp CTTCCCTGTGACTTCCAAGAAACGACAAGATCTCTAGCCCATCCATCGGTAAACGGAATTTGTTGGGGATaGCTGAAAACATATGCAACT +
Preference number: 4 (lower is better)
Translates to: LPCDFQETTRSLAHPSVNGICWG*LKTYAT
Trigger: AGTTGCATATGTTTTCAGTCATCCCCAACAAATTCC...GTTTACCGATGGATGGGCTAGAGATCTTGTCGTTTCTTGGAAGTCACAGGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp CATTCCAAATCTCAACACGCCACGTTCAGCCCAAGTTCAGCTTGTGCATTGTGTAATATACACACACACTaGAGTGATCTCTCCCTAAAG +
Preference number: 4 (lower is better)
Translates to: HSKSQHATFSPSSACALCNIHTH*SDLSLK
Trigger: CTTTAGGGAGAGATCACTTCAGTGTGTGTGTATATT...ACACAATGCACAAGCTGAACTTGGGCTGAACGTGGCGTGTTGAGATTTGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp CCATTGCTGAGCTCTCGAACATCACGAAGGAAATTCCAAAATGGTTATAATTCAATGGATGGATTGCCATaGCATCCACGGAGGCATCTG +
Preference number: 4 (lower is better)
Translates to: PLLSSRTSRRKFQNGYNSMDGLP*HPRRHL
Trigger: CAGATGCCTCCGTGGATGGCATGGCAATCCATCCAT...TGAATTATAACCATTTTGGAATTTCCTTCGTGATGTTCGAGAGCTCAGCAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp TCTGATGGCAGAAAGACAACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCATGACTGAAAACATATaGAACTCCTGCTTCTTAAGG +
Preference number: 4 (lower is better)
Translates to: SDGRKTTPAERRLNNCRSMTENI*NSCFLR
Trigger: CCTTAAGAAGCAGGAGTTGCATATGTTTTCAGTCAT...GGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTTGTCTTTCTGCCATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp TTTGGAATTGGGACACGAGTATCTATAGTCCCTTGCTGGGTGAGGAACTTTGACGTTATAATTCATGTGTaGCTAGAGTGGCAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: FGIGTRVSIVPCWVRNFDVIIHV*LEWQSP
Trigger: AGGACTCTGCCACTCTAGGCACACATGAATTATAAC...GTCAAAGTTCCTCACCCAGCAAGGGACTATAGATACTCGTGTCCCAATTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp TTTGGAATTGGGACACGAGTATCTATAGTCCCTTGCTGGGTGAGGAACTTTGACTTGACAATACTTGAGTaGAAAGCTTCATCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: FGIGTRVSIVPCWVRNFDLTILE*KASSRS
Trigger: GGACCTGGATGAAGCTTTGCACTCAAGTATTGTCAA...GTCAAAGTTCCTCACCCAGCAAGGGACTATAGATACTCGTGTCCCAATTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp AGCGTAACTGCGATTCACTTAACATACCTTACAGGACTAAGGGAGTACAATTTAAGCTGGGTAGACGGGTaGTTGCACTTTCTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: SVTAIHLTYLTGLREYNLSWVDG*LHFLAL
Trigger: CAAAGCCAGAAAGTGCAAGCACCCGTCTACCCAGCT...TAAATTGTACTCCCTTAGTCCTGTAAGGTATGTTAAGTGAATCGCAGTTACGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp TCTGATGGCAGAAAGACAACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCAGAAATGCTCCAATTTaGTTTGGTTTTGAATGGCAG +
Preference number: 4 (lower is better)
Translates to: SDGRKTTPAERRLNNCRSRNAPI*FGFEWQ
Trigger: CTGCCATTCAAAACCAAAGCAAATTGGAGCATTTCT...GGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTTGTCTTTCTGCCATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp GCCAAGGATGCTCAAGCGTTCTCTTCAATCTTCCCTGTGACTTCCAAGAAACGACATCCTGAGTACCTTTaGAATATTTCCTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: AKDAQAFSSIFPVTSKKRHPEYL*NISSLW
Trigger: CCACAAAGAGGAAATATTCCAAAGGTACTCAGGATG...TCGTTTCTTGGAAGTCACAGGGAAGATTGAAGAGAACGCTTGAGCATCCTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp AAACCATGTCTGGATGGCATTGAGTGGCACAGAAGGGATGGGACTGCATATATAAGGGTGCACATTCTTTaGTTCAGCTCCGAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: KPCLDGIEWHRRDGTAYIRVHIL*FSSERK
Trigger: TTTTCTTTCGGAGCTGAACCAAAGAATGTGCACCCT...TATATATGCAGTCCCATCCCTTCTGTGCCACTCAATGCCATCCAGACATGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp AGCGTAACTGCGATTCACTTAACATACCTTACAGGACTAAGGGAGTACAATTTACATGTGTGCCTAGAGTaGCAGAGTCCTGGGGTTTTC +
Preference number: 4 (lower is better)
Translates to: SVTAIHLTYLTGLREYNLHVCLE*QSPGVF
Trigger: GAAAACCCCAGGACTCTGCCACTCTAGGCACACATG...TAAATTGTACTCCCTTAGTCCTGTAAGGTATGTTAAGTGAATCGCAGTTACGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp ACTTCTGTAAGAAGCAGAATTACACCACATGTTATTCACATGCATAGGAGTGCACTGGATGGCATTGAGTaGCACAGAAGGGATGGGACT +
Preference number: 4 (lower is better)
Translates to: TSVRSRITPHVIHMHRSALDGIE*HRRDGT
Trigger: AGTCCCATCCCTTCTGTGCCACTCAATGCCATCCAG...TGCACTCCTATGCATGTGAATAACATGTGGTGTAATTCTGCTTCTTACAGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp AAACCATGTCTGGATGGCATTGAGTGGCACAGAAGGGATGGGACTGCATATATATCCCCTTTTACATCCTaGGTACCTTTGGAATATTTC +
Preference number: 4 (lower is better)
Translates to: KPCLDGIEWHRRDGTAYISPFTS*VPLEYF
Trigger: GAAATATTCCAAAGGTACTCAGGATGTAAAAGGGGA...TATATATGCAGTCCCATCCCTTCTGTGCCACTCAATGCCATCCAGACATGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp ATTCCAAATCTCAACACGCCACGTTCAGCCCAAGTTCAGCTTGTGCATTGTGTTTCCCCTTTTACATCCTaGGTACCTTTGGAATATTTC +
Preference number: 4 (lower is better)
Translates to: IPNLNTPRSAQVQLVHCVSPFTS*VPLEYF
Trigger: GAAATATTCCAAAGGTACTCAGGATGTAAAAGGGGA...AACACAATGCACAAGCTGAACTTGGGCTGAACGTGGCGTGTTGAGATTTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp CCATTGCTGAGCTCTCGAACATCACGAAGGAAATTCCAAAATGGTTATAATTCACCACGGAGGCATCTGTaGAGATCTCCCCTTTTACAT +
Preference number: 4 (lower is better)
Translates to: PLLSSRTSRRKFQNGYNSPRRHL*RSPLLH
Trigger: ATGTAAAAGGGGAGATCTTCACAGATGCCTCCGTGG...TGAATTATAACCATTTTGGAATTTCCTTCGTGATGTTCGAGAGCTCAGCAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp ATTCCAAATCTCAACACGCCACGTTCAGCCCAAGTTCAGCTTGTGCATTGTGTTGGAATTTGTTGGGGATaGCTGAAAACATATGCAACT +
Preference number: 4 (lower is better)
Translates to: IPNLNTPRSAQVQLVHCVGICWG*LKTYAT
Trigger: AGTTGCATATGTTTTCAGTCATCCCCAACAAATTCC...AACACAATGCACAAGCTGAACTTGGGCTGAACGTGGCGTGTTGAGATTTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp AATTCCATGAAGAACACGGCTCTTAGAAACCTCATTCCAAATCTCAACACGCCACTTCCAGGCGAAGAATaGGAAACTGTTGCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: NSMKNTALRNLIPNLNTPLPGEE*ETVACQ
Trigger: TTGACAAGCAACAGTTTCTCATTCTTCGCCTGGAAG...TGGCGTGTTGAGATTTGGAATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp AATTCCATGAAGAACACGGCTCTTAGAAACCTCATTCCAAATCTCAACACGCCATTTCCATACCATGAGTaGAACAGTTCCCCGCAAAGA +
Preference number: 4 (lower is better)
Translates to: NSMKNTALRNLIPNLNTPFPYHE*NSSPQR
Trigger: TCTTTGCGGGGAACTGTTTCACTCATGGTATGGAAA...TGGCGTGTTGAGATTTGGAATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp AATTCCATGAAGAACACGGCTCTTAGAAACCTCATTCCAAATCTCAACACGCCAAATTTGCTTTGGTTTTaGATGGCAGGCTCGAGAACC +
Preference number: 4 (lower is better)
Translates to: NSMKNTALRNLIPNLNTPNLLWF*MAGSRT
Trigger: GGTTCTCGAGCCTGCCATTCAAAACCAAAGCAAATT...TGGCGTGTTGAGATTTGGAATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp GCCAAGGATGCTCAAGCGTTCTCTTCAATCTTCCCTGTGACTTCCAAGAAACGATTCAATACCATGTTGTaGGAAATGCTCCAATTTGCT +
Preference number: 4 (lower is better)
Translates to: AKDAQAFSSIFPVTSKKRFNTML*EMLQFA
Trigger: AGCAAATTGGAGCATTTCTCACAACATGGTATTGAA...TCGTTTCTTGGAAGTCACAGGGAAGATTGAAGAGAACGCTTGAGCATCCTTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp CCATTGCTGAGCTCTCGAACATCACGAAGGAAATTCCAAAATGGTTATAATTCAGTCATCAAAGCCTCCTaGTTCTCACTTAAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: PLLSSRTSRRKFQNGYNSVIKAS*FSLKGP
Trigger: AGGGCCCTTAAGTGAGAAGCAGGAGGCTTTGATGAC...TGAATTATAACCATTTTGGAATTTCCTTCGTGATGTTCGAGAGCTCAGCAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp AATTCCATGAAGAACACGGCTCTTAGAAACCTCATTCCAAATCTCAACACGCCATCTGTCACTTTCTCATaGAAGTCGTCCGCGGATTTA +
Preference number: 4 (lower is better)
Translates to: NSMKNTALRNLIPNLNTPSVTFS*KSSADL
Trigger: TAAATCCGCGGACGACTTCCATGAGAAAGTGACAGA...TGGCGTGTTGAGATTTGGAATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp CTCGCGTTAGTCTTTTATTATAGGTGCCTCAGCCATGAACACAGTAGTGAGATACTTAAGAATGCCTTGTaGTCACAGAAGATGGATGGA +
Preference number: 4 (lower is better)
Translates to: LALVFYYRCLSHEHSSEILKNAL*SQKMDG
Trigger: TCCATCCATCTTCTGTGATCACAAGGCATTCTTAAG...TATCTCACTACTGTGTTCATGGCTGAGGCACCTATAATAAAAGACTAACGCGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR TCA 90 bp TCCAATTATAAACTGAAGTTCTTGAGAAAACGTATGAAGAGGCAGCAGAGAGAGGCAGAGCTGAATTCTTaGGAAACTGGGGTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: SNYKLKFLRKRMKRQQREAELNS*ETGVSN
Trigger: ATTGGAGACCCCAGTTTCTCAAGAATTCAGCTCTGC...CTCTCTCTGCTGCCTCTTCATACGTTTTCTCAAGAACTTCAGTTTATAATTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp TCCAATTATAAACTGAAGTTCTTGAGAAAACGTATGAAGAGGCAGCAGAGAGAGAGGAGGTCAGAAAGATaGAGGTGCTGCCAAAAACTG +
Preference number: 4 (lower is better)
Translates to: SNYKLKFLRKRMKRQQRERRSER*RCCQKL
Trigger: CAGTTTTTGGCAGCACCTTCATCTTTCTGACCTCCT...CTCTCTCTGCTGCCTCTTCATACGTTTTCTCAAGAACTTCAGTTTATAATTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp AGCGTAACTGCGATTCACTTAACATACCTTACAGGACTAAGGGAGTACAATTTAACACACACACTGAAGTaGTCTCTCCCTAAAGCATCC +
Preference number: 4 (lower is better)
Translates to: SVTAIHLTYLTGLREYNLTHTLK*SLPKAS
Trigger: GGATGCTTTAGGGAGAGATCACTTCAGTGTGTGTGT...TAAATTGTACTCCCTTAGTCCTGTAAGGTATGTTAAGTGAATCGCAGTTACGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp AGCGTAACTGCGATTCACTTAACATACCTTACAGGACTAAGGGAGTACAATTTAAGCCTCATTAGCAACTaGACAGAACCCACTCAGAAG +
Preference number: 4 (lower is better)
Translates to: SVTAIHLTYLTGLREYNLSLISN*TEPTQK
Trigger: CTTCTGAGTGGGTTCTGTTCAGTTGCTAATGAGGCT...TAAATTGTACTCCCTTAGTCCTGTAAGGTATGTTAAGTGAATCGCAGTTACGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp CCATTGCTGAGCTCTCGAACATCACGAAGGAAATTCCAAAATGGTTATAATTCAAGCCTCATTAGCAACTaGACAGAACCCACTCAGAAG +
Preference number: 4 (lower is better)
Translates to: PLLSSRTSRRKFQNGYNSSLISN*TEPTQK
Trigger: CTTCTGAGTGGGTTCTGTTCAGTTGCTAATGAGGCT...TGAATTATAACCATTTTGGAATTTCCTTCGTGATGTTCGAGAGCTCAGCAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp AAGAGGCAGCAGAGAGAGAGCCAGGACTGGTTAAATGCAGAAAGTGGTTTTGTTCCATGTTGTGAGAAATaGTCCAATTTGCTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: KRQQRESQDWLNAESGFVPCCEK*SNLLWF
Trigger: AAACCAAAGCAAATTGGAGCATTTCTCACAACATGG...AACAAAACCACTTTCTGCATTTAACCAGTCCTGGCTCTCTCTCTGCTGCCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp CTGCCAAGTGGCCTGGAAAATTCCATGAAGAACACGGCTCTTAGAAACCTCATTAAAGTACAGCGTAACTaGGATTCACTTAACATACCT +
Preference number: 4 (lower is better)
Translates to: LPSGLENSMKNTALRNLIKVQRN*DSLNIP
Trigger: AGGTATGTTAAGTGAATCGCAGTTACGCTGTACTTT...AATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATTTTCCAGGCCACTTGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CCA 90 bp AGCGTAACTGCGATTCACTTAACATACCTTACAGGACTAAGGGAGTACAATTTAGGGAAAAACCATGTCTaGATGGCATTGAGTGGCACA +
Preference number: 4 (lower is better)
Translates to: SVTAIHLTYLTGLREYNLGKNHV*MALSGT
Trigger: TGTGCCACTCAATGCCATCCAGACATGGTTTTTCCC...TAAATTGTACTCCCTTAGTCCTGTAAGGTATGTTAAGTGAATCGCAGTTACGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp CCATTGCTGAGCTCTCGAACATCACGAAGGAAATTCCAAAATGGTTATAATTCATGTGCATGGTGTACTTaGCGTTGGATGCATGATCTT +
Preference number: 4 (lower is better)
Translates to: PLLSSRTSRRKFQNGYNSCAWCT*RWMHDL
Trigger: AAGATCATGCATCCAACGTCAAGTACACCATGCACA...TGAATTATAACCATTTTGGAATTTCCTTCGTGATGTTCGAGAGCTCAGCAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR TCA 90 bp AGCGTAACTGCGATTCACTTAACATACCTTACAGGACTAAGGGAGTACAATTTATGTGCATGGTGTACTTaGCGTTGGATGCATGATCTT +
Preference number: 4 (lower is better)
Translates to: SVTAIHLTYLTGLREYNLCAWCT*RWMHDL
Trigger: AAGATCATGCATCCAACGTCAAGTACACCATGCACA...TAAATTGTACTCCCTTAGTCCTGTAAGGTATGTTAAGTGAATCGCAGTTACGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp ACTTCTGTAAGAAGCAGAATTACACCACATGTTATTCACATGCATAGGAGTGCAAACTGGAAGACCTTGTaGATGGTGTACTTGACGTTG +
Preference number: 4 (lower is better)
Translates to: TSVRSRITPHVIHMHRSANWKTL*MVYLTL
Trigger: CAACGTCAAGTACACCATGCACAAGGTCTTCCAGTT...TGCACTCCTATGCATGTGAATAACATGTGGTGTAATTCTGCTTCTTACAGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp AGCGTAACTGCGATTCACTTAACATACCTTACAGGACTAAGGGAGTACAATTTAGTATCTATAGTCCCTTaGTGGGTGAGGAACTTTGAC +
Preference number: 4 (lower is better)
Translates to: SVTAIHLTYLTGLREYNLVSIVP*WVRNFD
Trigger: GTCAAAGTTCCTCACCCAGCAAGGGACTATAGATAC...TAAATTGTACTCCCTTAGTCCTGTAAGGTATGTTAAGTGAATCGCAGTTACGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp TCCAATTATAAACTGAAGTTCTTGAGAAAACGTATGAAGAGGCAGCAGAGAGAGTTCAAACAGCTGCAGTaGTTCTGTCACTTTCTCATG +
Preference number: 4 (lower is better)
Translates to: SNYKLKFLRKRMKRQQREFKQLQ*FCHFLM
Trigger: CATGAGAAAGTGACAGAAGCACTGCAGCTGTTTGAA...CTCTCTCTGCTGCCTCTTCATACGTTTTCTCAAGAACTTCAGTTTATAATTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp AGCGTAACTGCGATTCACTTAACATACCTTACAGGACTAAGGGAGTACAATTTAAGAATGAGAAACTGTTaGTTGTCAAAAACGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SVTAIHLTYLTGLREYNLRMRNC*LSKTLS
Trigger: GCTCAGCGTTTTTGACAAGCAACAGTTTCTCATTCT...TAAATTGTACTCCCTTAGTCCTGTAAGGTATGTTAAGTGAATCGCAGTTACGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp TCCAATTATAAACTGAAGTTCTTGAGAAAACGTATGAAGAGGCAGCAGAGAGAGAACATATGCAACTCCTaGTTCTTAAGGTCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: SNYKLKFLRKRMKRQQRENICNS*FLRSSK
Trigger: CTTAGAAGACCTTAAGAAGCAGGAGTTGCATATGTT...CTCTCTCTGCTGCCTCTTCATACGTTTTCTCAAGAACTTCAGTTTATAATTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR GCA 90 bp TTAGTCTTTTATTATAGGTGCCTCAGCCATGAACACAGTAGTGAGATATTCCTTATGGGGAACAGCATTTaGACATTAAAACGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LVFYYRCLSHEHSSEIFLMGNSI*TLKRFS
Trigger: AGAGAAGCGTTTTAATGTGCAAATGCTGTTCCCCAT...AAGGAATATCTCACTACTGTGTTCATGGCTGAGGCACCTATAATAAAAGACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS CCA 90 bp GGCAGGCAGCGCAGGCGGAAGTGCTTCCCGTGCGCGTGCGCCAGGTaGCCCCAGAAGGCCTTGCGCAGGGCGTCGAAGGTGGAGCGGAAG +
Preference number: 5 (lower is better)
Translates to: GRQRRRKCFPCACAR*PQKALRRASKVERK
Trigger: CTTCCGCTCCACCTTCGACGCCCTGCGCAAGGCCTTCTGGGGCCACCTGGCGCACGCGCACGGGAAGCACTTCCGCCTGCGCTGCCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000628426.1
CDS GCA 90 bp GGAAGTGCTTCCCGTGCGCGTGCGCCAGGTGGCCCCAGAAGGCCTTaGGCAGGGCGTCGAAGGTGGAGCGGAAGCGCTTGGAGTAGAGCA +
Preference number: 5 (lower is better)
Translates to: GSASRARAPGGPRRP*AGRRRWSGSAWSRA
Trigger: TGCTCTACTCCAAGCGCTTCCGCTCCACCTTCGACGCCCTGCGCAAGGCCTTCTGGGGCCACCTGGCGCACGCGCACGGGAAGCACTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000628426.1
CDS-3UTR CAA 90 bp AGCTGCACAGGAAGGCAAGGACCACACCTGTCCTGGCATTGCTGTGGCCCCAGGGGGCCCCCTTGGCAGTaGACCTGCTGCTTGTGTGCG +
Preference number: 5 (lower is better)
Translates to: SCTGRQGPHLSWHCCGPRGPPWQ*TCCLCA
Trigger: CGCACACAAGCAGCAGGTCAACTGCCAAGGGGGCCC...CCTGGGGCCACAGCAATGCCAGGACAGGTGTGGTCCTTGCCTTCCTGTGCAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CAA 90 bp TCCCACCACCTGGGGGCTTCCAAGACTCCACAGCAGGCCTGTTGGTGCCTTGCTTTGATGGCGGAGAACTaGACCTCAGGGTGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: SHHLGASKTPQQACWCLALMAEN*TSGCSR
Trigger: GCGGCTGCACCCTGAGGTCAAGTTCTCCGCCATCAA...AGCAAGGCACCAACAGGCCTGCTGTGGAGTCTTGGAAGCCCCCAGGTGGTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS TCA 90 bp CGAAGGTGGAGCGGAAGCGCTTGGAGTAGAGCACGTAGGAGTTGGTaGGGTAGGGGTCGGTGGTGTTCTGCCCCGAGAACTCCTCGTACC +
Preference number: 5 (lower is better)
Translates to: RRWSGSAWSRARRSW*GRGRWCSAPRTPRT
Trigger: GGTACGAGGAGTTCTCGGGGCAGAACACCACCGACCCCTACCTCACCAACTCCTACGTGCTCTACTCCAAGCGCTTCCGCTCCACCTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000628426.1
CDS-3UTR CAA 90 bp CTGAACAGAACCCACTCAGAAGACGCACTCACCCACACGTGCGCGTACACACACTCGGGACGCCGTGCATaGGATGCGGGGCTCTTGGTC +
Preference number: 5 (lower is better)
Translates to: LNRTHSEDALTHTCAYTHSGRRA*DAGLLV
Trigger: GACCAAGAGCCCCGCATCCAATGCACGGCGTCCCGA...GTGTGTGTACGCGCACGTGTGGGTGAGTGCGTCTTCTGAGTGGGTTCTGTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS CCA 90 bp CCAGGTTCCGGTCCTCGGGACGCCGTGCATTGGATGCGGGGCTCTTaGTCATCAAAGCCTCCTGCTTCTCACTTAAGGGCCCTAGGTTCA +
Preference number: 5 (lower is better)
Translates to: PGSGPRDAVHWMRGS*SSKPPASHLRALGS
Trigger: TGAACCTAGGGCCCTTAAGTGAGAAGCAGGAGGCTTTGATGACCAAGAGCCCCGCATCCAATGCACGGCGTCCCGAGGACCGGAACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp TTTGGTGGGCGAGACCTTGGCCTGAGAACTTTGGTTCACAGGAAGCTTCCCTTGTGGCCCCAGAAGGCCTaGCGCAGGGCGTCGAAGGTG +
Preference number: 5 (lower is better)
Translates to: FGGRDLGLRTLVHRKLPLWPQKA*RRASKV
Trigger: CACCTTCGACGCCCTGCGCAAGGCCTTCTGGGGCCA...CAAGGGAAGCTTCCTGTGAACCAAAGTTCTCAGGCCAAGGTCTCGCCCACCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp AGATCCCACGGCCTCTGTAGTAAGAAAGAGGGGGCAGAGCCTCTTGGCCTGAAGACACCTGTCCTGGCATaGCTGTGGCCCCAGGACCCA +
Preference number: 5 (lower is better)
Translates to: RSHGLCSKKEGAEPLGLKTPVLA*LWPQDP
Trigger: TGGGTCCTGGGGCCACAGCAATGCCAGGACAGGTGT...CTTCAGGCCAAGAGGCTCTGCCCCCTCTTTCTTACTACAGAGGCCGTGGGATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CAA 90 bp ACGGAACCTATTCTGTCAGCAAGAGCCGGGCCTCGAATGAGAGGAAGCAGAGGCCAGTTGACCTGCTGCTaGTGTGCGCCGTCGGGTAAC +
Preference number: 5 (lower is better)
Translates to: TEPILSARAGPRMRGSRGQLTCC*CAPSGN
Trigger: GTTACCCGACGGCGCACACAAGCAGCAGGTCAACTG...GCCTCTGCTTCCTCTCATTCGAGGCCCGGCTCTTGCTGACAGAATAGGTTCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp TCATTAGCAACTGAACAGAACCCACTCAGAAGACGCACTCACCCACACGTGCGCGGGCCCCCTTGGCAGTaGACCTGCTGCTTGTGTGCG +
Preference number: 5 (lower is better)
Translates to: SLATEQNPLRRRTHPHVRGPPWQ*TCCLCA
Trigger: CGCACACAAGCAGCAGGTCAACTGCCAAGGGGGCCC...GCGCACGTGTGGGTGAGTGCGTCTTCTGAGTGGGTTCTGTTCAGTTGCTAATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp CAGAGCAGAGCTGAATTCTTGAGAAACTGGGGTCTCCAATGGCCTCGGATAGAGTGGCCCCAGAAGGCCTaGCGCAGGGCGTCGAAGGTG +
Preference number: 5 (lower is better)
Translates to: QSRAEFLRNWGLQWPRIEWPQKA*RRASKV
Trigger: CACCTTCGACGCCCTGCGCAAGGCCTTCTGGGGCCA...CTCTATCCGAGGCCATTGGAGACCCCAGTTTCTCAAGAATTCAGCTCTGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp ACGGAACCTATTCTGTCAGCAAGAGCCGGGCCTCGAATGAGAGGAAGCAGAGGCGTCCCACCTGGGCTGTaGCCAAGGATGCTCAAGCGT +
Preference number: 5 (lower is better)
Translates to: TEPILSARAGPRMRGSRGVPPGL*PRMLKR
Trigger: ACGCTTGAGCATCCTTGGCAACAGCCCAGGTGGGAC...GCCTCTGCTTCCTCTCATTCGAGGCCCGGCTCTTGCTGACAGAATAGGTTCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp ACTATCTTCTGCTTAAAACCCTCTGAGGGGTCCCATCTCTCTCAGGGTGATGTCTGGCCCCAGAAGGCCTaGCGCAGGGCGTCGAAGGTG +
Preference number: 5 (lower is better)
Translates to: TIFCLKPSEGSHLSQGDVWPQKA*RRASKV
Trigger: CACCTTCGACGCCCTGCGCAAGGCCTTCTGGGGCCA...GACATCACCCTGAGAGAGATGGGACCCCTCAGAGGGTTTTAAGCAGAAGATAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CAA 90 bp AACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCTCCTACCCCCGAAGCCTTTGATGGCGGAGAACTaGACCTCAGGGTGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: NTSRKTAEQLQILLPPKPLMAEN*TSGCSR
Trigger: GCGGCTGCACCCTGAGGTCAAGTTCTCCGCCATCAA...AGGCTTCGGGGGTAGGAGGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp ACGGAACCTATTCTGTCAGCAAGAGCCGGGCCTCGAATGAGAGGAAGCAGAGGCTTGGATGCGGGGCTCTaGGTCATCAAAGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: TEPILSARAGPRMRGSRGLDAGL*VIKASC
Trigger: GCAGGAGGCTTTGATGACCAAGAGCCCCGCATCCAA...GCCTCTGCTTCCTCTCATTCGAGGCCCGGCTCTTGCTGACAGAATAGGTTCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS TCA 90 bp CTCTCCACAGGGTCCCTGAGCATGACAATCAGTCTGGCATTTGGCTaGAAGGCGTGGATGAAGTCCTGCGTCAGAAACGGTGGCTCGCCA +
Preference number: 5 (lower is better)
Translates to: LSTGSLSMTISLAFG*KAWMKSCVRNGGSP
Trigger: TGGCGAGCCACCGTTTCTGACGCAGGACTTCATCCACGCCTTTCAGCCAAATGCCAGACTGATTGTCATGCTCAGGGACCCTGTGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000476765.1
ENST00000628426.1
CDS GCA 90 bp CTGCTCCTTTGCAGAGCTGGCCTGCAGTCCTTGATGGATCTGGTGTaGGGCCAGGTCAAAGAGGTCCAGATAATCTTCCACGGGATAGCG +
Preference number: 5 (lower is better)
Translates to: LLLCRAGLQSLMDLV*GQVKEVQIIFHGIA
Trigger: CGCTATCCCGTGGAAGATTATCTGGACCTCTTTGACCTGGCCGCACACCAGATCCATCAAGGACTGCAGGCCAGCTCTGCAAAGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000628426.1
CDS-3UTR CAA 90 bp CTGAGGGGTCCCATCTCTCTCAGGGTGATGTCTAGACTTCTTCTGAGGCTAGACCAGTTGACCTGCTGCTaGTGTGCGCCGTCGGGTAAC +
Preference number: 5 (lower is better)
Translates to: LRGPISLRVMSRLLLRLDQLTCC*CAPSGN
Trigger: GTTACCCGACGGCGCACACAAGCAGCAGGTCAACTG...GTCTAGCCTCAGAAGAAGTCTAGACATCACCCTGAGAGAGATGGGACCCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CAA 90 bp TCCCACCACCTGGGGGCTTCCAAGACTCCACAGCAGGCCTGTTGGTGCCTTGCTAGGGGCTCTTACTGTTaGGAAGGAATTTGTTGGGGA +
Preference number: 5 (lower is better)
Translates to: SHHLGASKTPQQACWCLARGSYC*EGICWG
Trigger: TCCCCAACAAATTCCTTCCAAACAGTAAGAGCCCCT...AGCAAGGCACCAACAGGCCTGCTGTGGAGTCTTGGAAGCCCCCAGGTGGTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CAA 90 bp AACTCTCCTTCAGGCCTCAGCACAGACATTCCCTCTCCTAAGAACCTGCCTGAAGCTGGCCTGCAGTCCTaGATGGATCTGGTGTGCGGC +
Preference number: 5 (lower is better)
Translates to: NSPSGLSTDIPSPKNLPEAGLQS*MDLVCG
Trigger: GCCGCACACCAGATCCATCAAGGACTGCAGGCCAGC...TTCAGGCAGGTTCTTAGGAGAGGGAATGTCTGTGCTGAGGCCTGAAGGAGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CAA 90 bp CTGAACAGAACCCACTCAGAAGACGCACTCACCCACACGTGCGCGTACACACACTGGGTAGACGGGTGCTaGCACTTTCTGGCTTTGGTG +
Preference number: 5 (lower is better)
Translates to: LNRTHSEDALTHTCAYTHWVDGC*HFLALV
Trigger: CACCAAAGCCAGAAAGTGCAAGCACCCGTCTACCCA...GTGTGTGTACGCGCACGTGTGGGTGAGTGCGTCTTCTGAGTGGGTTCTGTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS CCA 90 bp GGCATTTGGCTGAAAGGCGTGGATGAAGTCCTGCGTCAGAAACGGTaGCTCGCCATCCGTGCTGTTGTCGTAGAAGAACGTCCAGGCATT +
Preference number: 5 (lower is better)
Translates to: GIWLKGVDEVLRQKR*LAIRAVVVEERPGI
Trigger: AATGCCTGGACGTTCTTCTACGACAACAGCACGGATGGCGAGCCACCGTTTCTGACGCAGGACTTCATCCACGCCTTTCAGCCAAATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000628426.1
CDS CCA 90 bp CAACCTCTCCACAGGGTCCCTGAGCATGACAATCAGTCTGGCATTTaGCTGAAAGGCGTGGATGAAGTCCTGCGTCAGAAACGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: QPLHRVPEHDNQSGI*LKGVDEVLRQKRWL
Trigger: GAGCCACCGTTTCTGACGCAGGACTTCATCCACGCCTTTCAGCCAAATGCCAGACTGATTGTCATGCTCAGGGACCCTGTGGAGAGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000476765.1
ENST00000628426.1
CDS-3UTR CAA 90 bp TGCTCTCAGTTCCCTGGCCAACTCTCCTTCAGGCCTCAGCACAGACATTCCCTCGGTGGTGATGCTCCTTaGTGTCACTTGGGTTTTCGC +
Preference number: 5 (lower is better)
Translates to: CSQFPGQLSFRPQHRHSLGGDAP*CHLGFR
Trigger: GCGAAAACCCAAGTGACACAAAGGAGCATCACCACC...GAGGGAATGTCTGTGCTGAGGCCTGAAGGAGAGTTGGCCAGGGAACTGAGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CAA 90 bp CTGAACAGAACCCACTCAGAAGACGCACTCACCCACACGTGCGCGTACACACACCTCCCTAAAGCATCCTaGTGCTCAGGCCAGATTTCC +
Preference number: 5 (lower is better)
Translates to: LNRTHSEDALTHTCAYTHLPKAS*CSGQIS
Trigger: GGAAATCTGGCCTGAGCACAAGGATGCTTTAGGGAG...GTGTGTGTACGCGCACGTGTGGGTGAGTGCGTCTTCTGAGTGGGTTCTGTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS GCA 90 bp ACTGGCCTCCCCGATAATGATTGTATTCATCTTGCTCTGCTCCTTTaGAGAGCTGGCCTGCAGTCCTTGATGGATCTGGTGTGCGGCCAG +
Preference number: 5 (lower is better)
Translates to: TGLPDNDCIHLALLL*RAGLQSLMDLVCGQ
Trigger: CTGGCCGCACACCAGATCCATCAAGGACTGCAGGCCAGCTCTGCAAAGGAGCAGAGCAAGATGAATACAATCATTATCGGGGAGGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000628426.1
CDS-3UTR CAA 90 bp CTGCCAAGTGGCCTGGAAAATTCCATGAAGAACACGGCTCTTAGAAACCTCATTGGGCCCCCTTGGCAGTaGACCTGCTGCTTGTGTGCG +
Preference number: 5 (lower is better)
Translates to: LPSGLENSMKNTALRNLIGPPWQ*TCCLCA
Trigger: CGCACACAAGCAGCAGGTCAACTGCCAAGGGGGCCC...AATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATTTTCCAGGCCACTTGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp GCCAAGGATGCTCAAGCGTTCTCTTCAATCTTCCCTGTGACTTCCAAGAAACGAGCTGGCCTGCAGTCCTaGATGGATCTGGTGTGCGGC +
Preference number: 5 (lower is better)
Translates to: AKDAQAFSSIFPVTSKKRAGLQS*MDLVCG
Trigger: GCCGCACACCAGATCCATCAAGGACTGCAGGCCAGC...TCGTTTCTTGGAAGTCACAGGGAAGATTGAAGAGAACGCTTGAGCATCCTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp AAGAGGCAGCAGAGAGAGAGCCAGGACTGGTTAAATGCAGAAAGTGGTTTTGTTTCGGGACGCCGTGCATaGGATGCGGGGCTCTTGGTC +
Preference number: 5 (lower is better)
Translates to: KRQQRESQDWLNAESGFVSGRRA*DAGLLV
Trigger: GACCAAGAGCCCCGCATCCAATGCACGGCGTCCCGA...AACAAAACCACTTTCTGCATTTAACCAGTCCTGGCTCTCTCTCTGCTGCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp AACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCTCCTACCCCCGAAGCCTCTTGGCCTGAGAACTTaGGTTCACAGGAAGCTTCCC +
Preference number: 5 (lower is better)
Translates to: NTSRKTAEQLQILLPPKPLGLRT*VHRKLP
Trigger: GGGAAGCTTCCTGTGAACCAAAGTTCTCAGGCCAAG...AGGCTTCGGGGGTAGGAGGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp CAGAGCAGAGCTGAATTCTTGAGAAACTGGGGTCTCCAATGGCCTCGGATAGAGTTGCACTTTCTGGCTTaGGTGGGCGAGACCTTGGCC +
Preference number: 5 (lower is better)
Translates to: QSRAEFLRNWGLQWPRIELHFLA*VGETLA
Trigger: GGCCAAGGTCTCGCCCACCAAAGCCAGAAAGTGCAA...CTCTATCCGAGGCCATTGGAGACCCCAGTTTCTCAAGAATTCAGCTCTGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp CTGGGTGTCTTGCTAAATGGTAATCTTCCTAAAGGCACCCTCATCCTCCTGCTGAGGCCTGTTGGTGCCTaGCTATGCGAGACGCTGAGC +
Preference number: 5 (lower is better)
Translates to: LGVLLNGNLPKGTLILLLRPVGA*LCETLS
Trigger: GCTCAGCGTCTCGCATAGCAAGGCACCAACAGGCCT...CAGCAGGAGGATGAGGGTGCCTTTAGGAAGATTACCATTTAGCAAGACACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CAA 90 bp CTGAACAGAACCCACTCAGAAGACGCACTCACCCACACGTGCGCGTACACACACGAGGGTGCACATTCTTaGGTTCAGCTCCGAAAGAAA +
Preference number: 5 (lower is better)
Translates to: LNRTHSEDALTHTCAYTHEGAHS*VQLRKK
Trigger: TTTCTTTCGGAGCTGAACCAAAGAATGTGCACCCTC...GTGTGTGTACGCGCACGTGTGGGTGAGTGCGTCTTCTGAGTGGGTTCTGTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp CCCCGCAAAGAGATTTGTAAAATCCTGATGATGACGGCATTGGCGGGCCCAGCAGGTGGTGATGCTCCTTaGTGTCACTTGGGTTTTCGC +
Preference number: 5 (lower is better)
Translates to: PRKEICKILMMTALAGPAGGDAP*CHLGFR
Trigger: GCGAAAACCCAAGTGACACAAAGGAGCATCACCACC...TGCTGGGCCCGCCAATGCCGTCATCATCAGGATTTTACAAATCTCTTTGCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp ATTCCAAATCTCAACACGCCACGTTCAGCCCAAGTTCAGCTTGTGCATTGTGTTGCTGGCCTGCAGTCCTaGATGGATCTGGTGTGCGGC +
Preference number: 5 (lower is better)
Translates to: IPNLNTPRSAQVQLVHCVAGLQS*MDLVCG
Trigger: GCCGCACACCAGATCCATCAAGGACTGCAGGCCAGC...AACACAATGCACAAGCTGAACTTGGGCTGAACGTGGCGTGTTGAGATTTGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp ACTATCTTCTGCTTAAAACCCTCTGAGGGGTCCCATCTCTCTCAGGGTGATGTCTCCACAGCAGGCCTGTaGGTGCCTTGCTATGCGAGA +
Preference number: 5 (lower is better)
Translates to: TIFCLKPSEGSHLSQGDVSTAGL*VPCYAR
Trigger: TCTCGCATAGCAAGGCACCAACAGGCCTGCTGTGGA...GACATCACCCTGAGAGAGATGGGACCCCTCAGAGGGTTTTAAGCAGAAGATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS GCA 90 bp GCTTCTCTCTGTTCCTATGCTGAAACGCAAACCCACAATGCCGCTTaGATAATAACAACAAACCAGCTCCTTCTGCCAGGGGCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: ASLCSYAETQTHNAA*IITTNQLLLPGASS
Trigger: CGAGCTGGCCCCTGGCAGAAGGAGCTGGTTTGTTGTTATTATGCAAGCGGCATTGTGGGTTTGCGTTTCAGCATAGGAACAGAGAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476765.1
ENST00000628426.1
CDS CCA 90 bp GGTGATGCTCCTTTGTGTCACTTGGGTTTTCGCTGTCCATCAAGCTaGGGTTGCTGGGGAAGCCTCCGTAATGGAAAGGTGATGAGATCA +
Preference number: 5 (lower is better)
Translates to: GDAPLCHLGFRCPSS*GCWGSLRNGKVMRS
Trigger: TGATCTCATCACCTTTCCATTACGGAGGCTTCCCCAGCAACCCCAGCTTGATGGACAGCGAAAACCCAAGTGACACAAAGGAGCATCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000628426.1
CDS-3UTR CAA 90 bp CAGAGCAGAGCTGAATTCTTGAGAAACTGGGGTCTCCAATGGCCTCGGATAGAGTCATTGATGGATGGATaGCCATGCCATCCACGGAGG +
Preference number: 5 (lower is better)
Translates to: QSRAEFLRNWGLQWPRIESLMDG*PCHPRR
Trigger: CCTCCGTGGATGGCATGGCAATCCATCCATCAATGA...CTCTATCCGAGGCCATTGGAGACCCCAGTTTCTCAAGAATTCAGCTCTGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp GCCAGCAAATGGCCAAGCTGGAAACCTGACCCACACCAATGGCTGGTTCCAAAGGAGGGTGCACATTCTTaGGTTCAGCTCCGAAAGAAA +
Preference number: 5 (lower is better)
Translates to: ASKWPSWKPDPHQWLVPKEGAHS*VQLRKK
Trigger: TTTCTTTCGGAGCTGAACCAAAGAATGTGCACCCTC...CTTTGGAACCAGCCATTGGTGTGGGTCAGGTTTCCAGCTTGGCCATTTGCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CAA 90 bp TTTGGTGGGCGAGACCTTGGCCTGAGAACTTTGGTTCACAGGAAGCTTCCCTTGGCTCCTTTGTGTCACTaGGGTTTTCGCTGTCCATCA +
Preference number: 5 (lower is better)
Translates to: FGGRDLGLRTLVHRKLPLAPLCH*GFRCPS
Trigger: TGATGGACAGCGAAAACCCAAGTGACACAAAGGAGC...CAAGGGAAGCTTCCTGTGAACCAAAGTTCTCAGGCCAAGGTCTCGCCCACCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp AAACCATGTCTGGATGGCATTGAGTGGCACAGAAGGGATGGGACTGCATATATATTGATGGCGGAGAACTaGACCTCAGGGTGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: KPCLDGIEWHRRDGTAYILMAEN*TSGCSR
Trigger: GCGGCTGCACCCTGAGGTCAAGTTCTCCGCCATCAA...TATATATGCAGTCCCATCCCTTCTGTGCCACTCAATGCCATCCAGACATGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp ACGGAACCTATTCTGTCAGCAAGAGCCGGGCCTCGAATGAGAGGAAGCAGAGGCATGAGAAACTGTTGCTaGTCAAAAACGCTGAGCCAG +
Preference number: 5 (lower is better)
Translates to: TEPILSARAGPRMRGSRGMRNCC*SKTLSQ
Trigger: CTGGCTCAGCGTTTTTGACAAGCAACAGTTTCTCAT...GCCTCTGCTTCCTCTCATTCGAGGCCCGGCTCTTGCTGACAGAATAGGTTCCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp TGGCCTCGGATAGAGGAGCTCTGTGAGGGGTCCATTGCTGAGCTCTCGAACATCGAAGTGTTCAATTCCTaGAGGTTGCTCATTCTGGCA +
Preference number: 5 (lower is better)
Translates to: WPRIEELCEGSIAELSNIEVFNS*RLLILA
Trigger: TGCCAGAATGAGCAACCTCAAGGAATTGAACACTTC...GATGTTCGAGAGCTCAGCAATGGACCCCTCACAGAGCTCCTCTATCCGAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp TGGCCTCGGATAGAGGAGCTCTGTGAGGGGTCCATTGCTGAGCTCTCGAACATCCAGCCCAAGTTCAGCTaGTGCATTGTGTTTTGGAAT +
Preference number: 5 (lower is better)
Translates to: WPRIEELCEGSIAELSNIQPKFS*CIVFWN
Trigger: ATTCCAAAACACAATGCACAAGCTGAACTTGGGCTG...GATGTTCGAGAGCTCAGCAATGGACCCCTCACAGAGCTCCTCTATCCGAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp ACGGAACCTATTCTGTCAGCAAGAGCCGGGCCTCGAATGAGAGGAAGCAGAGGCCAGCCCAAGTTCAGCTaGTGCATTGTGTTTTGGAAT +
Preference number: 5 (lower is better)
Translates to: TEPILSARAGPRMRGSRGQPKFS*CIVFWN
Trigger: ATTCCAAAACACAATGCACAAGCTGAACTTGGGCTG...GCCTCTGCTTCCTCTCATTCGAGGCCCGGCTCTTGCTGACAGAATAGGTTCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp ACGGAACCTATTCTGTCAGCAAGAGCCGGGCCTCGAATGAGAGGAAGCAGAGGCCACAGGAAGCTTCCCTaGACAATACTTGAGTGCAAA +
Preference number: 5 (lower is better)
Translates to: TEPILSARAGPRMRGSRGHRKLP*TILECK
Trigger: TTTGCACTCAAGTATTGTCAAGGGAAGCTTCCTGTG...GCCTCTGCTTCCTCTCATTCGAGGCCCGGCTCTTGCTGACAGAATAGGTTCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp ACGGAACCTATTCTGTCAGCAAGAGCCGGGCCTCGAATGAGAGGAAGCAGAGGCATGCTCCAATTTGCTTaGGTTTTGAATGGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: TEPILSARAGPRMRGSRGMLQFA*VLNGRL
Trigger: GAGCCTGCCATTCAAAACCAAAGCAAATTGGAGCAT...GCCTCTGCTTCCTCTCATTCGAGGCCCGGCTCTTGCTGACAGAATAGGTTCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp TGCACACGCTGCTCTCAGTTCCCTGGCCAACTCTCCTTCAGGCCTCAGCACAGAAATGGGGAACAGCATTaGCACATTAAAACGCTTCTC +
Preference number: 5 (lower is better)
Translates to: CTRCSQFPGQLSFRPQHRNGEQH*HIKTLL
Trigger: GAGAAGCGTTTTAATGTGCAAATGCTGTTCCCCATT...TCTGTGCTGAGGCCTGAAGGAGAGTTGGCCAGGGAACTGAGAGCAGCGTGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS CCA 90 bp CCTTTGTGTCACTTGGGTTTTCGCTGTCCATCAAGCTGGGGTTGCTaGGGAAGCCTCCGTAATGGAAAGGTGATGAGATCAGAAGCTCTT +
Preference number: 5 (lower is better)
Translates to: PLCHLGFRCPSSWGC*GSLRNGKVMRSEAL
Trigger: AAGAGCTTCTGATCTCATCACCTTTCCATTACGGAGGCTTCCCCAGCAACCCCAGCTTGATGGACAGCGAAAACCCAAGTGACACAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000628426.1
CDS-3UTR CAA 90 bp CTGGCCAACTCTCCTTCAGGCCTCAGCACAGACATTCCCTCTCCTAAGAACCTGATCATGGTCTTCTCATaGATGGATGGATTGCCATGC +
Preference number: 5 (lower is better)
Translates to: LANSPSGLSTDIPSPKNLIMVFS*MDGLPC
Trigger: GCATGGCAATCCATCCATCAATGAGAAGACCATGAT...CAGGTTCTTAGGAGAGGGAATGTCTGTGCTGAGGCCTGAAGGAGAGTTGGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CAA 90 bp AGAACACGGCTCTTAGAAACCTCATTCCAAATCTCAACACGCCACGTTCAGCCCGGTGGTGATGCTCCTTaGTGTCACTTGGGTTTTCGC +
Preference number: 5 (lower is better)
Translates to: RTRLLETSFQISTRHVQPGGDAP*CHLGFR
Trigger: GCGAAAACCCAAGTGACACAAAGGAGCATCACCACC...GGGCTGAACGTGGCGTGTTGAGATTTGGAATGAGGTTTCTAAGAGCCGTGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp GGCAATGCTCGCTGCATAAGCCCTGCTGTTGAAGTACACAGCCAGCCCAGGGAGATTATTTACAGAGGATaGGTGGTGATGCTCCTTTGT +
Preference number: 5 (lower is better)
Translates to: GNARCISPAVEVHSQPREIIYRG*VVMLLC
Trigger: ACAAAGGAGCATCACCACCAATCCTCTGTAAATAAT...CTCCCTGGGCTGGCTGTGTACTTCAACAGCAGGGCTTATGCAGCGAGCATTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CAA 90 bp ACGGAACCTATTCTGTCAGCAAGAGCCGGGCCTCGAATGAGAGGAAGCAGAGGCCTGTTTGGAAGGAATTaGTTGGGGATGACTGAAAAC +
Preference number: 5 (lower is better)
Translates to: TEPILSARAGPRMRGSRGLFGRN*LGMTEN
Trigger: GTTTTCAGTCATCCCCAACAAATTCCTTCCAAACAG...GCCTCTGCTTCCTCTCATTCGAGGCCCGGCTCTTGCTGACAGAATAGGTTCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp GTTCCAAAGTGTACTCCTCCTACCTGGCACCAGAGCAGGCTCTGGGGTTACCTGATGATTGTATTCATCTaGCTCTGCTCCTTTGCAGAG +
Preference number: 5 (lower is better)
Translates to: VPKCTPPTWHQSRLWGYLMIVFI*LCSFAE
Trigger: CTCTGCAAAGGAGCAGAGCAAGATGAATACAATCAT...CAGGTAACCCCAGAGCCTGCTCTGGTGCCAGGTAGGAGGAGTACACTTTGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CAA 90 bp TCATTAGCAACTGAACAGAACCCACTCAGAAGACGCACTCACCCACACGTGCGCAGAAACTGGAAGACCTaGTGCATGGTGTACTTGACG +
Preference number: 5 (lower is better)
Translates to: SLATEQNPLRRRTHPHVRRNWKT*CMVYLT
Trigger: CGTCAAGTACACCATGCACAAGGTCTTCCAGTTTCT...GCGCACGTGTGGGTGAGTGCGTCTTCTGAGTGGGTTCTGTTCAGTTGCTAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp AAACCATGTCTGGATGGCATTGAGTGGCACAGAAGGGATGGGACTGCATATATATTGGATGCGGGGCTCTaGGTCATCAAAGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: KPCLDGIEWHRRDGTAYILDAGL*VIKASC
Trigger: GCAGGAGGCTTTGATGACCAAGAGCCCCGCATCCAA...TATATATGCAGTCCCATCCCTTCTGTGCCACTCAATGCCATCCAGACATGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp AATTCCATGAAGAACACGGCTCTTAGAAACCTCATTCCAAATCTCAACACGCCACTGATGATGACGGCATaGGCGGGCCCAGCACGTGCA +
Preference number: 5 (lower is better)
Translates to: NSMKNTALRNLIPNLNTPLMMTA*AGPARA
Trigger: TGCACGTGCTGGGCCCGCCAATGCCGTCATCATCAG...TGGCGTGTTGAGATTTGGAATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp AGAACACGGCTCTTAGAAACCTCATTCCAAATCTCAACACGCCACGTTCAGCCCCTTGGCCTGAGAACTTaGGTTCACAGGAAGCTTCCC +
Preference number: 5 (lower is better)
Translates to: RTRLLETSFQISTRHVQPLGLRT*VHRKLP
Trigger: GGGAAGCTTCCTGTGAACCAAAGTTCTCAGGCCAAG...GGGCTGAACGTGGCGTGTTGAGATTTGGAATGAGGTTTCTAAGAGCCGTGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp CTTCCCTGTGACTTCCAAGAAACGACAAGATCTCTAGCCCATCCATCGGTAAACTGGGTAGACGGGTGCTaGCACTTTCTGGCTTTGGTG +
Preference number: 5 (lower is better)
Translates to: LPCDFQETTRSLAHPSVNWVDGC*HFLALV
Trigger: CACCAAAGCCAGAAAGTGCAAGCACCCGTCTACCCA...GTTTACCGATGGATGGGCTAGAGATCTTGTCGTTTCTTGGAAGTCACAGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp AGAACACGGCTCTTAGAAACCTCATTCCAAATCTCAACACGCCACGTTCAGCCCCTCCCTAAAGCATCCTaGTGCTCAGGCCAGATTTCC +
Preference number: 5 (lower is better)
Translates to: RTRLLETSFQISTRHVQPLPKAS*CSGQIS
Trigger: GGAAATCTGGCCTGAGCACAAGGATGCTTTAGGGAG...GGGCTGAACGTGGCGTGTTGAGATTTGGAATGAGGTTTCTAAGAGCCGTGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp TGCTCTCAGTTCCCTGGCCAACTCTCCTTCAGGCCTCAGCACAGACATTCCCTCTGGAATATTTCCTCTTaGTGGGGCGCAAACTTTAAA +
Preference number: 5 (lower is better)
Translates to: CSQFPGQLSFRPQHRHSLWNISS*WGANFK
Trigger: TTTAAAGTTTGCGCCCCACAAAGAGGAAATATTCCA...GAGGGAATGTCTGTGCTGAGGCCTGAAGGAGAGTTGGCCAGGGAACTGAGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CAA 90 bp AATTCCATGAAGAACACGGCTCTTAGAAACCTCATTCCAAATCTCAACACGCCACAGTTGACCTGCTGCTaGTGTGCGCCGTCGGGTAAC +
Preference number: 5 (lower is better)
Translates to: NSMKNTALRNLIPNLNTPQLTCC*CAPSGN
Trigger: GTTACCCGACGGCGCACACAAGCAGCAGGTCAACTG...TGGCGTGTTGAGATTTGGAATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp AGAACACGGCTCTTAGAAACCTCATTCCAAATCTCAACACGCCACGTTCAGCCCGCTCCTTTGTGTCACTaGGGTTTTCGCTGTCCATCA +
Preference number: 5 (lower is better)
Translates to: RTRLLETSFQISTRHVQPAPLCH*GFRCPS
Trigger: TGATGGACAGCGAAAACCCAAGTGACACAAAGGAGC...GGGCTGAACGTGGCGTGTTGAGATTTGGAATGAGGTTTCTAAGAGCCGTGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp AACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCTCCTACCCCCGAAGCCTATGATTGTATTCATCTaGCTCTGCTCCTTTGCAGAG +
Preference number: 5 (lower is better)
Translates to: NTSRKTAEQLQILLPPKPMIVFI*LCSFAE
Trigger: CTCTGCAAAGGAGCAGAGCAAGATGAATACAATCAT...AGGCTTCGGGGGTAGGAGGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp GACAAGATCTCTAGCCCATCCATCGGTAAACCAAGCTGCCAAGTGGCCTGGAAAAGCAGAGCTGAATTCTaGAGAAACTGGGGTCTCCAA +
Preference number: 5 (lower is better)
Translates to: DKISSPSIGKPSCQVAWKSRAEF*RNWGLQ
Trigger: TTGGAGACCCCAGTTTCTCAAGAATTCAGCTCTGCT...TTTCCAGGCCACTTGGCAGCTTGGTTTACCGATGGATGGGCTAGAGATCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp TCATTAGCAACTGAACAGAACCCACTCAGAAGACGCACTCACCCACACGTGCGCCACAGGAAGCTTCCCTaGACAATACTTGAGTGCAAA +
Preference number: 5 (lower is better)
Translates to: SLATEQNPLRRRTHPHVRHRKLP*TILECK
Trigger: TTTGCACTCAAGTATTGTCAAGGGAAGCTTCCTGTG...GCGCACGTGTGGGTGAGTGCGTCTTCTGAGTGGGTTCTGTTCAGTTGCTAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp GCCAAGGATGCTCAAGCGTTCTCTTCAATCTTCCCTGTGACTTCCAAGAAACGACATGTCTGGATGGCATaGAGTGGCACAGAAGGGATG +
Preference number: 5 (lower is better)
Translates to: AKDAQAFSSIFPVTSKKRHVWMA*SGTEGM
Trigger: CATCCCTTCTGTGCCACTCAATGCCATCCAGACATG...TCGTTTCTTGGAAGTCACAGGGAAGATTGAAGAGAACGCTTGAGCATCCTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp CTGAACAGAACCCACTCAGAAGACGCACTCACCCACACGTGCGCGTACACACACACACGGTCACAACTTTaGAGAACAAAAAGGAACTTC +
Preference number: 5 (lower is better)
Translates to: LNRTHSEDALTHTCAYTHTRSQL*RTKRNF
Trigger: GAAGTTCCTTTTTGTTCTCAAAAGTTGTGACCGTGT...GTGTGTGTACGCGCACGTGTGGGTGAGTGCGTCTTCTGAGTGGGTTCTGTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp GGCAATGCTCGCTGCATAAGCCCTGCTGTTGAAGTACACAGCCAGCCCAGGGAGGAACAAGAGATACGATaGAGGAATCAACAGAAAATG +
Preference number: 5 (lower is better)
Translates to: GNARCISPAVEVHSQPREEQEIR*RNQQKM
Trigger: CATTTTCTGTTGATTCCTCAATCGTATCTCTTGTTC...CTCCCTGGGCTGGCTGTGTACTTCAACAGCAGGGCTTATGCAGCGAGCATTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CAA 90 bp ATGATCACACCTGTGAAGATAGCCATTGAATACAGACAGTCTGTGCAACACGGCTCATTGATGGATGGATaGCCATGCCATCCACGGAGG +
Preference number: 5 (lower is better)
Translates to: MITPVKIAIEYRQSVQHGSLMDG*PCHPRR
Trigger: CCTCCGTGGATGGCATGGCAATCCATCCATCAATGA...GCCGTGTTGCACAGACTGTCTGTATTCAATGGCTATCTTCACAGGTGTGATCAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp AACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCTCCTACCCCCGAAGCCTACACGAAACAGAATTTaGTTTTCTCCTTTGCACGTG +
Preference number: 5 (lower is better)
Translates to: NTSRKTAEQLQILLPPKPTRNRI*FSPLHV
Trigger: CACGTGCAAAGGAGAAAACAAAATTCTGTTTCGTGT...AGGCTTCGGGGGTAGGAGGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp AACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCTCCTACCCCCGAAGCCTATTATTTACAGAGGATaGGTGGTGATGCTCCTTTGT +
Preference number: 5 (lower is better)
Translates to: NTSRKTAEQLQILLPPKPIIYRG*VVMLLC
Trigger: ACAAAGGAGCATCACCACCAATCCTCTGTAAATAAT...AGGCTTCGGGGGTAGGAGGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp CTGGCCAACTCTCCTTCAGGCCTCAGCACAGACATTCCCTCTCCTAAGAACCTGCGGATTTATTCGAACTaGCAAAGTAGAGATAGTCTG +
Preference number: 5 (lower is better)
Translates to: LANSPSGLSTDIPSPKNLRIYSN*QSRDSL
Trigger: CAGACTATCTCTACTTTGCAAGTTCGAATAAATCCG...CAGGTTCTTAGGAGAGGGAATGTCTGTGCTGAGGCCTGAAGGAGAGTTGGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CAA 90 bp ACTTCTGTAAGAAGCAGAATTACACCACATGTTATTCACATGCATAGGAGTGCACTGATGATGACGGCATaGGCGGGCCCAGCACGTGCA +
Preference number: 5 (lower is better)
Translates to: TSVRSRITPHVIHMHRSALMMTA*AGPARA
Trigger: TGCACGTGCTGGGCCCGCCAATGCCGTCATCATCAG...TGCACTCCTATGCATGTGAATAACATGTGGTGTAATTCTGCTTCTTACAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp CTGCCAAGTGGCCTGGAAAATTCCATGAAGAACACGGCTCTTAGAAACCTCATTTCTGTGAGGGGTCCATaGCTGAGCTCTCGAACATCA +
Preference number: 5 (lower is better)
Translates to: LPSGLENSMKNTALRNLISVRGP*LSSRTS
Trigger: TGATGTTCGAGAGCTCAGCAATGGACCCCTCACAGA...AATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATTTTCCAGGCCACTTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp TTTGGTGGGCGAGACCTTGGCCTGAGAACTTTGGTTCACAGGAAGCTTCCCTTGTGGAATATTTCCTCTTaGTGGGGCGCAAACTTTAAA +
Preference number: 5 (lower is better)
Translates to: FGGRDLGLRTLVHRKLPLWNISS*WGANFK
Trigger: TTTAAAGTTTGCGCCCCACAAAGAGGAAATATTCCA...CAAGGGAAGCTTCCTGTGAACCAAAGTTCTCAGGCCAAGGTCTCGCCCACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp TCATTAGCAACTGAACAGAACCCACTCAGAAGACGCACTCACCCACACGTGCGCTTCAATTCCTTGAGGTaGCTCATTCTGGCATTAACA +
Preference number: 5 (lower is better)
Translates to: SLATEQNPLRRRTHPHVRFNSLR*LILALT
Trigger: TGTTAATGCCAGAATGAGCAACCTCAAGGAATTGAA...GCGCACGTGTGGGTGAGTGCGTCTTCTGAGTGGGTTCTGTTCAGTTGCTAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp GACAAGATCTCTAGCCCATCCATCGGTAAACCAAGCTGCCAAGTGGCCTGGAAAAGTTCAGCTTGTGCATaGTGTTTTGGAATTGGGACA +
Preference number: 5 (lower is better)
Translates to: DKISSPSIGKPSCQVAWKSSACA*CFGIGT
Trigger: TGTCCCAATTCCAAAACACAATGCACAAGCTGAACT...TTTCCAGGCCACTTGGCAGCTTGGTTTACCGATGGATGGGCTAGAGATCTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp TCCAATTATAAACTGAAGTTCTTGAGAAAACGTATGAAGAGGCAGCAGAGAGAGGTCCCACCTGGGCTGTaGCCAAGGATGCTCAAGCGT +
Preference number: 5 (lower is better)
Translates to: SNYKLKFLRKRMKRQQREVPPGL*PRMLKR
Trigger: ACGCTTGAGCATCCTTGGCAACAGCCCAGGTGGGAC...CTCTCTCTGCTGCCTCTTCATACGTTTTCTCAAGAACTTCAGTTTATAATTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp AAGAGGCAGCAGAGAGAGAGCCAGGACTGGTTAAATGCAGAAAGTGGTTTTGTTGAGGGTGCACATTCTTaGGTTCAGCTCCGAAAGAAA +
Preference number: 5 (lower is better)
Translates to: KRQQRESQDWLNAESGFVEGAHS*VQLRKK
Trigger: TTTCTTTCGGAGCTGAACCAAAGAATGTGCACCCTC...AACAAAACCACTTTCTGCATTTAACCAGTCCTGGCTCTCTCTCTGCTGCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp GACAAGATCTCTAGCCCATCCATCGGTAAACCAAGCTGCCAAGTGGCCTGGAAAACACGAAACAGAATTTaGTTTTCTCCTTTGCACGTG +
Preference number: 5 (lower is better)
Translates to: DKISSPSIGKPSCQVAWKTRNRI*FSPLHV
Trigger: CACGTGCAAAGGAGAAAACAAAATTCTGTTTCGTGT...TTTCCAGGCCACTTGGCAGCTTGGTTTACCGATGGATGGGCTAGAGATCTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp AGGAATGCAAGACAGACCCATCACAACAGCCTGGTACAGCAGCATTATTACCCCCTGTTTGGAAGGAATTaGTTGGGGATGACTGAAAAC +
Preference number: 5 (lower is better)
Translates to: RNARQTHHNSLVQQHYYPLFGRN*LGMTEN
Trigger: GTTTTCAGTCATCCCCAACAAATTCCTTCCAAACAG...GGGGTAATAATGCTGCTGTACCAGGCTGTTGTGATGGGTCTGTCTTGCATTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CAA 90 bp CTGCCAAGTGGCCTGGAAAATTCCATGAAGAACACGGCTCTTAGAAACCTCATTAGGGGCTCTTACTGTTaGGAAGGAATTTGTTGGGGA +
Preference number: 5 (lower is better)
Translates to: LPSGLENSMKNTALRNLIRGSYC*EGICWG
Trigger: TCCCCAACAAATTCCTTCCAAACAGTAAGAGCCCCT...AATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATTTTCCAGGCCACTTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp AAGAGGCAGCAGAGAGAGAGCCAGGACTGGTTAAATGCAGAAAGTGGTTTTGTTAGGGGCTCTTACTGTTaGGAAGGAATTTGTTGGGGA +
Preference number: 5 (lower is better)
Translates to: KRQQRESQDWLNAESGFVRGSYC*EGICWG
Trigger: TCCCCAACAAATTCCTTCCAAACAGTAAGAGCCCCT...AACAAAACCACTTTCTGCATTTAACCAGTCCTGGCTCTCTCTCTGCTGCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp GACAAGATCTCTAGCCCATCCATCGGTAAACCAAGCTGCCAAGTGGCCTGGAAACGGATTTATTCGAACTaGCAAAGTAGAGATAGTCTG +
Preference number: 5 (lower is better)
Translates to: DKISSPSIGKPSCQVAWKRIYSN*QSRDSL
Trigger: CAGACTATCTCTACTTTGCAAGTTCGAATAAATCCG...TTTCCAGGCCACTTGGCAGCTTGGTTTACCGATGGATGGGCTAGAGATCTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp TTTGGAATTGGGACACGAGTATCTATAGTCCCTTGCTGGGTGAGGAACTTTGACAGAAACTGGAAGACCTaGTGCATGGTGTACTTGACG +
Preference number: 5 (lower is better)
Translates to: FGIGTRVSIVPCWVRNFDRNWKT*CMVYLT
Trigger: CGTCAAGTACACCATGCACAAGGTCTTCCAGTTTCT...GTCAAAGTTCCTCACCCAGCAAGGGACTATAGATACTCGTGTCCCAATTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp TCTGATGGCAGAAAGACAACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCCTTGTGCATTGTGTTTaGGAATTGGGACACGAGTAT +
Preference number: 5 (lower is better)
Translates to: SDGRKTTPAERRLNNCRSLVHCV*ELGHEY
Trigger: ATACTCGTGTCCCAATTCCAAAACACAATGCACAAG...GGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTTGTCTTTCTGCCATCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp AGAACACGGCTCTTAGAAACCTCATTCCAAATCTCAACACGCCACGTTCAGCCCAGTTCAGCTTGTGCATaGTGTTTTGGAATTGGGACA +
Preference number: 5 (lower is better)
Translates to: RTRLLETSFQISTRHVQPSSACA*CFGIGT
Trigger: TGTCCCAATTCCAAAACACAATGCACAAGCTGAACT...GGGCTGAACGTGGCGTGTTGAGATTTGGAATGAGGTTTCTAAGAGCCGTGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp AGCGTAACTGCGATTCACTTAACATACCTTACAGGACTAAGGGAGTACAATTTATTGCACTTTCTGGCTTaGGTGGGCGAGACCTTGGCC +
Preference number: 5 (lower is better)
Translates to: SVTAIHLTYLTGLREYNLLHFLA*VGETLA
Trigger: GGCCAAGGTCTCGCCCACCAAAGCCAGAAAGTGCAA...TAAATTGTACTCCCTTAGTCCTGTAAGGTATGTTAAGTGAATCGCAGTTACGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp ACTATCTTCTGCTTAAAACCCTCTGAGGGGTCCCATCTCTCTCAGGGTGATGTCAACCCACAATGCCGCTaGCATAATAACAACAAACCA +
Preference number: 5 (lower is better)
Translates to: TIFCLKPSEGSHLSQGDVNPQCR*HNNNKP
Trigger: TGGTTTGTTGTTATTATGCAAGCGGCATTGTGGGTT...GACATCACCCTGAGAGAGATGGGACCCCTCAGAGGGTTTTAAGCAGAAGATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS TCA 90 bp TTCTCATTGATGGATGGATTGCCATGCCATCCACGGAGGCATCTGTaGAGATCTCCCCTTTTACATCCTGAGTACCTTTGGAATATTTCC +
Preference number: 5 (lower is better)
Translates to: FSLMDGLPCHPRRHL*RSPLLHPEYLWNIS
Trigger: GGAAATATTCCAAAGGTACTCAGGATGTAAAAGGGGAGATCTTCACAGATGCCTCCGTGGATGGCATGGCAATCCATCCATCAATGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000462406.1
ENST00000628426.1
CDS-3UTR CAA 90 bp CTGCCAAGTGGCCTGGAAAATTCCATGAAGAACACGGCTCTTAGAAACCTCATTATCATGGTCTTCTCATaGATGGATGGATTGCCATGC +
Preference number: 5 (lower is better)
Translates to: LPSGLENSMKNTALRNLIIMVFS*MDGLPC
Trigger: GCATGGCAATCCATCCATCAATGAGAAGACCATGAT...AATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATTTTCCAGGCCACTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp ATGATCACACCTGTGAAGATAGCCATTGAATACAGACAGTCTGTGCAACACGGCATCATGGTCTTCTCATaGATGGATGGATTGCCATGC +
Preference number: 5 (lower is better)
Translates to: MITPVKIAIEYRQSVQHGIMVFS*MDGLPC
Trigger: GCATGGCAATCCATCCATCAATGAGAAGACCATGAT...GCCGTGTTGCACAGACTGTCTGTATTCAATGGCTATCTTCACAGGTGTGATCAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp TCTGATGGCAGAAAGACAACACCAGCAGAAAGACGGCTGAACAACTGCAGATCCATTATTTACAGAGGATaGGTGGTGATGCTCCTTTGT +
Preference number: 5 (lower is better)
Translates to: SDGRKTTPAERRLNNCRSIIYRG*VVMLLC
Trigger: ACAAAGGAGCATCACCACCAATCCTCTGTAAATAAT...GGATCTGCAGTTGTTCAGCCGTCTTTCTGCTGGTGTTGTCTTTCTGCCATCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp CATTCCAAATCTCAACACGCCACGTTCAGCCCAAGTTCAGCTTGTGCATTGTGTATGATTGTATTCATCTaGCTCTGCTCCTTTGCAGAG +
Preference number: 5 (lower is better)
Translates to: HSKSQHATFSPSSACALCMIVFI*LCSFAE
Trigger: CTCTGCAAAGGAGCAGAGCAAGATGAATACAATCAT...ACACAATGCACAAGCTGAACTTGGGCTGAACGTGGCGTGTTGAGATTTGGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp TTTGGAATTGGGACACGAGTATCTATAGTCCCTTGCTGGGTGAGGAACTTTGACCAATTTGCTTTGGTTTaGAATGGCAGGCTCGAGAAC +
Preference number: 5 (lower is better)
Translates to: FGIGTRVSIVPCWVRNFDQFALV*NGRLEN
Trigger: GTTCTCGAGCCTGCCATTCAAAACCAAAGCAAATTG...GTCAAAGTTCCTCACCCAGCAAGGGACTATAGATACTCGTGTCCCAATTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp CTGCCAAGTGGCCTGGAAAATTCCATGAAGAACACGGCTCTTAGAAACCTCATTCAATTTGCTTTGGTTTaGAATGGCAGGCTCGAGAAC +
Preference number: 5 (lower is better)
Translates to: LPSGLENSMKNTALRNLIQFALV*NGRLEN
Trigger: GTTCTCGAGCCTGCCATTCAAAACCAAAGCAAATTG...AATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATTTTCCAGGCCACTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp TTTGGAATTGGGACACGAGTATCTATAGTCCCTTGCTGGGTGAGGAACTTTGACATGCTCCAATTTGCTTaGGTTTTGAATGGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: FGIGTRVSIVPCWVRNFDMLQFA*VLNGRL
Trigger: GAGCCTGCCATTCAAAACCAAAGCAAATTGGAGCAT...GTCAAAGTTCCTCACCCAGCAAGGGACTATAGATACTCGTGTCCCAATTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS TCA 90 bp AGAAACTGGAAGACCTTGTGCATGGTGTACTTGACGTTGGATGCATaGTCTTCCAGGCGAAGAATGAGAAACTGTTGCTTGTCAAAAACG +
Preference number: 5 (lower is better)
Translates to: RNWKTLCMVYLTLDA*SSRRRMRNCCLSKT
Trigger: CGTTTTTGACAAGCAACAGTTTCTCATTCTTCGCCTGGAAGATCATGCATCCAACGTCAAGTACACCATGCACAAGGTCTTCCAGTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS GCA 90 bp TCGTTCCCTTCAGTCCTCACTTCGAGAACAGCAAGCAAGTTCATCTaGTTACTGTCCACACGAAACAGAATTTTGTTTTCTCCTTTGCAC +
Preference number: 5 (lower is better)
Translates to: SFPSVLTSRTASKFI*LLSTRNRILFSPLH
Trigger: GTGCAAAGGAGAAAACAAAATTCTGTTTCGTGTGGACAGTAAGCAGATGAACTTGCTTGCTGTTCTCGAAGTGAGGACTGAAGGGAACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000462406.1
ENST00000628426.1
CDS GCA 90 bp GTTCAGAAACTGGAAGACCTTGTGCATGGTGTACTTGACGTTGGATaGATGATCTTCCAGGCGAAGAATGAGAAACTGTTGCTTGTCAAA +
Preference number: 5 (lower is better)
Translates to: VQKLEDLVHGVLDVG*MIFQAKNEKLLLVK
Trigger: TTTGACAAGCAACAGTTTCTCATTCTTCGCCTGGAAGATCATGCATCCAACGTCAAGTACACCATGCACAAGGTCTTCCAGTTTCTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp AGCGTAACTGCGATTCACTTAACATACCTTACAGGACTAAGGGAGTACAATTTATCTGTGAGGGGTCCATaGCTGAGCTCTCGAACATCA +
Preference number: 5 (lower is better)
Translates to: SVTAIHLTYLTGLREYNLSVRGP*LSSRTS
Trigger: TGATGTTCGAGAGCTCAGCAATGGACCCCTCACAGA...TAAATTGTACTCCCTTAGTCCTGTAAGGTATGTTAAGTGAATCGCAGTTACGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS TCA 90 bp GGGAACAGCATTTGCACATTAAAACGCTTCTCTCTGTTCCTATGCTaGAACGCAAACCCACAATGCCGCTTGCATAATAACAACAAACCA +
Preference number: 5 (lower is better)
Translates to: GNSICTLKRFSLFLC*NANPQCRLHNNNKP
Trigger: TGGTTTGTTGTTATTATGCAAGCGGCATTGTGGGTTTGCGTTTCAGCATAGGAACAGAGAGAAGCGTTTTAATGTGCAAATGCTGTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476765.1
ENST00000628426.1
CDS-3UTR CAA 90 bp ATTCCAAATCTCAACACGCCACGTTCAGCCCAAGTTCAGCTTGTGCATTGTGTTAAACCTGATGAGGGCTaGAATTACCTAGATTTTCCA +
Preference number: 5 (lower is better)
Translates to: IPNLNTPRSAQVQLVHCVKPDEG*NYLDFP
Trigger: TGGAAAATCTAGGTAATTCAAGCCCTCATCAGGTTT...AACACAATGCACAAGCTGAACTTGGGCTGAACGTGGCGTGTTGAGATTTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp CTGCCAAGTGGCCTGGAAAATTCCATGAAGAACACGGCTCTTAGAAACCTCATTACACGGTCACAACTTTaGAGAACAAAAAGGAACTTC +
Preference number: 5 (lower is better)
Translates to: LPSGLENSMKNTALRNLITRSQL*RTKRNF
Trigger: GAAGTTCCTTTTTGTTCTCAAAAGTTGTGACCGTGT...AATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATTTTCCAGGCCACTTGGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp TTAGTCTTTTATTATAGGTGCCTCAGCCATGAACACAGTAGTGAGATATTCCTTGCTCCTTTGTGTCACTaGGGTTTTCGCTGTCCATCA +
Preference number: 5 (lower is better)
Translates to: LVFYYRCLSHEHSSEIFLAPLCH*GFRCPS
Trigger: TGATGGACAGCGAAAACCCAAGTGACACAAAGGAGC...AAGGAATATCTCACTACTGTGTTCATGGCTGAGGCACCTATAATAAAAGACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS-3UTR CAA 90 bp CCATTGCTGAGCTCTCGAACATCACGAAGGAAATTCCAAAATGGTTATAATTCAAGCAGAGCTGAATTCTaGAGAAACTGGGGTCTCCAA +
Preference number: 5 (lower is better)
Translates to: PLLSSRTSRRKFQNGYNSSRAEF*RNWGLQ
Trigger: TTGGAGACCCCAGTTTCTCAAGAATTCAGCTCTGCT...TGAATTATAACCATTTTGGAATTTCCTTCGTGATGTTCGAGAGCTCAGCAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp AATTCCATGAAGAACACGGCTCTTAGAAACCTCATTCCAAATCTCAACACGCCACGGATTTATTCGAACTaGCAAAGTAGAGATAGTCTG +
Preference number: 5 (lower is better)
Translates to: NSMKNTALRNLIPNLNTPRIYSN*QSRDSL
Trigger: CAGACTATCTCTACTTTGCAAGTTCGAATAAATCCG...TGGCGTGTTGAGATTTGGAATGAGGTTTCTAAGAGCCGTGTTCTTCATGGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp ACTTCTGTAAGAAGCAGAATTACACCACATGTTATTCACATGCATAGGAGTGCAATGAGAAACTGTTGCTaGTCAAAAACGCTGAGCCAG +
Preference number: 5 (lower is better)
Translates to: TSVRSRITPHVIHMHRSAMRNCC*SKTLSQ
Trigger: CTGGCTCAGCGTTTTTGACAAGCAACAGTTTCTCAT...TGCACTCCTATGCATGTGAATAACATGTGGTGTAATTCTGCTTCTTACAGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp AGCGTAACTGCGATTCACTTAACATACCTTACAGGACTAAGGGAGTACAATTTAGAAGTGTTCAATTCCTaGAGGTTGCTCATTCTGGCA +
Preference number: 5 (lower is better)
Translates to: SVTAIHLTYLTGLREYNLEVFNS*RLLILA
Trigger: TGCCAGAATGAGCAACCTCAAGGAATTGAACACTTC...TAAATTGTACTCCCTTAGTCCTGTAAGGTATGTTAAGTGAATCGCAGTTACGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp AGCGTAACTGCGATTCACTTAACATACCTTACAGGACTAAGGGAGTACAATTTACTGTTTGGAAGGAATTaGTTGGGGATGACTGAAAAC +
Preference number: 5 (lower is better)
Translates to: SVTAIHLTYLTGLREYNLLFGRN*LGMTEN
Trigger: GTTTTCAGTCATCCCCAACAAATTCCTTCCAAACAG...TAAATTGTACTCCCTTAGTCCTGTAAGGTATGTTAAGTGAATCGCAGTTACGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp TCCAATTATAAACTGAAGTTCTTGAGAAAACGTATGAAGAGGCAGCAGAGAGAGCTTGTGCATTGTGTTTaGGAATTGGGACACGAGTAT +
Preference number: 5 (lower is better)
Translates to: SNYKLKFLRKRMKRQQRELVHCV*ELGHEY
Trigger: ATACTCGTGTCCCAATTCCAAAACACAATGCACAAG...CTCTCTCTGCTGCCTCTTCATACGTTTTCTCAAGAACTTCAGTTTATAATTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp ACTTCTGTAAGAAGCAGAATTACACCACATGTTATTCACATGCATAGGAGTGCATGGAATATTTCCTCTTaGTGGGGCGCAAACTTTAAA +
Preference number: 5 (lower is better)
Translates to: TSVRSRITPHVIHMHRSAWNISS*WGANFK
Trigger: TTTAAAGTTTGCGCCCCACAAAGAGGAAATATTCCA...TGCACTCCTATGCATGTGAATAACATGTGGTGTAATTCTGCTTCTTACAGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS-3UTR CAA 90 bp TTAGTCTTTTATTATAGGTGCCTCAGCCATGAACACAGTAGTGAGATATTCCTTACACGAAACAGAATTTaGTTTTCTCCTTTGCACGTG +
Preference number: 5 (lower is better)
Translates to: LVFYYRCLSHEHSSEIFLTRNRI*FSPLHV
Trigger: CACGTGCAAAGGAGAAAACAAAATTCTGTTTCGTGT...AAGGAATATCTCACTACTGTGTTCATGGCTGAGGCACCTATAATAAAAGACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628426.1
CDS GCA 72 bp GGCAGGCAGCGCAGGCGGAAGTGCTTCCCGTGCGCGTaGGCCAGGTGGCCCCAGAAGGCCTTGCGCAGGGCG +
Preference number: 6 (lower is better)
Translates to: GRQRRRKCFPCA*ARWPQKALRRA
Trigger: CGCCCTGCGCAAGGCCTTCTGGGGCCACCTGGCGCACGCGCACGGGAAGCACTTCCGCCTGCGCTGCCTGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000628426.1
CDS CCA 72 bp CGCAGGCGGAAGTGCTTCCCGTGCGCGTGCGCCAGGTaGCCCCAGAAGGCCTTGCGCAGGGCGTCGAAGGTG +
Preference number: 6 (lower is better)
Translates to: RRRKCFPCACAR*PQKALRRASKV
Trigger: CACCTTCGACGCCCTGCGCAAGGCCTTCTGGGGCCACCTGGCGCACGCGCACGGGAAGCACTTCCGCCTGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000628426.1
CDS CAA 72 bp TTCCCGTGCGCGTGCGCCAGGTGGCCCCAGAAGGCCTaGCGCAGGGCGTCGAAGGTGGAGCGGAAGCGCTTG +
Preference number: 6 (lower is better)
Translates to: FPCACARWPQKA*RRASKVERKRL
Trigger: CAAGCGCTTCCGCTCCACCTTCGACGCCCTGCGCAAGGCCTTCTGGGGCCACCTGGCGCACGCGCACGGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000628426.1
CDS CCA 72 bp GGTGGCCCCAGAAGGCCTTGCGCAGGGCGTCGAAGGTaGAGCGGAAGCGCTTGGAGTAGAGCACGTAGGAGT +
Preference number: 6 (lower is better)
Translates to: GGPRRPCAGRRR*SGSAWSRARRS
Trigger: ACTCCTACGTGCTCTACTCCAAGCGCTTCCGCTCCACCTTCGACGCCCTGCGCAAGGCCTTCTGGGGCCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000628426.1
CDS CAA 72 bp ATGGGCCCCAGGTTCCGGTCCTCGGGACGCCGTGCATaGGATGCGGGGCTCTTGGTCATCAAAGCCTCCTGC +
Preference number: 6 (lower is better)
Translates to: MGPRFRSSGRRA*DAGLLVIKASC
Trigger: GCAGGAGGCTTTGATGACCAAGAGCCCCGCATCCAATGCACGGCGTCCCGAGGACCGGAACCTGGGGCCCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS CAA 90 bp AGGCGGACGATTCCAAAGCGCTTCCGGGTCCACCAGTGTGGCTCCTaGATGGCGGAGAACTTGACCTCAGGGTGCAGCCGCAGGCGGTCA +
Preference number: 6 (lower is better)
Translates to: RRTIPKRFRVHQCGS*MAENLTSGCSRRRS
Trigger: TGACCGCCTGCGGCTGCACCCTGAGGTCAAGTTCTCCGCCATCAAGGAGCCACACTGGTGGACCCGGAAGCGCTTTGGAATCGTCCGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000628426.1
CDS CAA 90 bp CCCAGGTTCCGGTCCTCGGGACGCCGTGCATTGGATGCGGGGCTCTaGGTCATCAAAGCCTCCTGCTTCTCACTTAAGGGCCCTAGGTTC +
Preference number: 6 (lower is better)
Translates to: PRFRSSGRRALDAGL*VIKASCFSLKGPRF
Trigger: GAACCTAGGGCCCTTAAGTGAGAAGCAGGAGGCTTTGATGACCAAGAGCCCCGCATCCAATGCACGGCGTCCCGAGGACCGGAACCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS TCA 72 bp CATAGAGGTCTGTGGTCCCGCACTTGGGCTGCCCTATaGTGTAGAAGTGCGGCAGGCAGCGCAGGCGGAAGT +
Preference number: 6 (lower is better)
Translates to: HRGLWSRTWAAL*CRSAAGSAGGS
Trigger: ACTTCCGCCTGCGCTGCCTGCCGCACTTCTACATCATAGGGCAGCCCAAGTGCGGGACCACAGACCTCTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000628426.1
CDS CCA 72 bp GCGGACGATTCCAAAGCGCTTCCGGGTCCACCAGTGTaGCTCCTTGATGGCGGAGAACTTGACCTCAGGGTG +
Preference number: 6 (lower is better)
Translates to: ADDSKALPGPPV*LLDGGELDLRV
Trigger: CACCCTGAGGTCAAGTTCTCCGCCATCAAGGAGCCACACTGGTGGACCCGGAAGCGCTTTGGAATCGTCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000628426.1
CDS TCA 72 bp AGCGGAAGCGCTTGGAGTAGAGCACGTAGGAGTTGGTaGGGTAGGGGTCGGTGGTGTTCTGCCCCGAGAACT +
Preference number: 6 (lower is better)
Translates to: SGSAWSRARRSW*GRGRWCSAPRT
Trigger: AGTTCTCGGGGCAGAACACCACCGACCCCTACCTCACCAACTCCTACGTGCTCTACTCCAAGCGCTTCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000628426.1
CDS TCA 72 bp TTGCTCTGCTCCTTTGCAGAGCTGGCCTGCAGTCCTTaGTGGATCTGGTGTGCGGCCAGGTCAAAGAGGTCC +
Preference number: 6 (lower is better)
Translates to: LLCSFAELACSP*WIWCAARSKRS
Trigger: GGACCTCTTTGACCTGGCCGCACACCAGATCCATCAAGGACTGCAGGCCAGCTCTGCAAAGGAGCAGAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000628426.1
CDS TCA 72 bp AGAGCCCAACCTGGAGCCTCACAGGCATGGCGTTGTTaGGGGTGTTGTTGTAGACGCAGGCGCGCAGTGAAT +
Preference number: 6 (lower is better)
Translates to: RAQPGASQAWRC*GCCCRRRRAVN
Trigger: ATTCACTGCGCGCCTGCGTCTACAACAACACCCTCAACAACGCCATGCCTGTGAGGCTCCAGGTTGGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS CAA 72 bp CTTGCTCTGCTCCTTTGCAGAGCTGGCCTGCAGTCCTaGATGGATCTGGTGTGCGGCCAGGTCAAAGAGGTC +
Preference number: 6 (lower is better)
Translates to: LALLLCRAGLQS*MDLVCGQVKEV
Trigger: GACCTCTTTGACCTGGCCGCACACCAGATCCATCAAGGACTGCAGGCCAGCTCTGCAAAGGAGCAGAGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000628426.1
CDS GCA 72 bp AATCCTGATGATGACGGCATTGGCGGGCCCAGCACGTaGAGCAACAATTCAGCTCTCACGTCGTCTTCCACG +
Preference number: 6 (lower is better)
Translates to: NPDDDGIGGPST*SNNSALTSSST
Trigger: CGTGGAAGACGACGTGAGAGCTGAATTGTTGCTGCACGTGCTGGGCCCGCCAATGCCGTCATCATCAGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS GCA 72 bp TGCAGAGCTGGCCTGCAGTCCTTGATGGATCTGGTGTaGGGCCAGGTCAAAGAGGTCCAGATAATCTTCCAC +
Preference number: 6 (lower is better)
Translates to: CRAGLQSLMDLV*GQVKEVQIIFH
Trigger: GTGGAAGATTATCTGGACCTCTTTGACCTGGCCGCACACCAGATCCATCAAGGACTGCAGGCCAGCTCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000628426.1
CDS CCA 72 bp CTGAAAGGCGTGGATGAAGTCCTGCGTCAGAAACGGTaGCTCGCCATCCGTGCTGTTGTCGTAGAAGAACGT +
Preference number: 6 (lower is better)
Translates to: LKGVDEVLRQKR*LAIRAVVVEER
Trigger: ACGTTCTTCTACGACAACAGCACGGATGGCGAGCCACCGTTTCTGACGCAGGACTTCATCCACGCCTTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000628426.1
CDS TCA 72 bp GGGTCCCTGAGCATGACAATCAGTCTGGCATTTGGCTaGAAGGCGTGGATGAAGTCCTGCGTCAGAAACGGT +
Preference number: 6 (lower is better)
Translates to: GSLSMTISLAFG*KAWMKSCVRNG
Trigger: ACCGTTTCTGACGCAGGACTTCATCCACGCCTTTCAGCCAAATGCCAGACTGATTGTCATGCTCAGGGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000476765.1
ENST00000628426.1
CDS GCA 72 bp GCATTGGATGCGGGGCTCTTGGTCATCAAAGCCTCCTaGTTCTCACTTAAGGGCCCTAGGTTCAGAAACTGG +
Preference number: 6 (lower is better)
Translates to: ALDAGLLVIKAS*FSLKGPRFRNW
Trigger: CCAGTTTCTGAACCTAGGGCCCTTAAGTGAGAAGCAGGAGGCTTTGATGACCAAGAGCCCCGCATCCAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS CCA 72 bp CCTTTGTGTCACTTGGGTTTTCGCTGTCCATCAAGCTaGGGTTGCTGGGGAAGCCTCCGTAATGGAAAGGTG +
Preference number: 6 (lower is better)
Translates to: PLCHLGFRCPSS*GCWGSLRNGKV
Trigger: CACCTTTCCATTACGGAGGCTTCCCCAGCAACCCCAGCTTGATGGACAGCGAAAACCCAAGTGACACAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000628426.1
CDS CAA 72 bp GAGGCACTGGCCTCCCCGATAATGATTGTATTCATCTaGCTCTGCTCCTTTGCAGAGCTGGCCTGCAGTCCT +
Preference number: 6 (lower is better)
Translates to: EALASPIMIVFI*LCSFAELACSP
Trigger: AGGACTGCAGGCCAGCTCTGCAAAGGAGCAGAGCAAGATGAATACAATCATTATCGGGGAGGCCAGTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000628426.1
CDS CCA 72 bp CACTTGGGTTTTCGCTGTCCATCAAGCTGGGGTTGCTaGGGAAGCCTCCGTAATGGAAAGGTGATGAGATCA +
Preference number: 6 (lower is better)
Translates to: HLGFRCPSSWGC*GSLRNGKVMRS
Trigger: TGATCTCATCACCTTTCCATTACGGAGGCTTCCCCAGCAACCCCAGCTTGATGGACAGCGAAAACCCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000628426.1
CDS CCA 72 bp TACAGAGGATTGGTGGTGATGCTCCTTTGTGTCACTTaGGTTTTCGCTGTCCATCAAGCTGGGGTTGCTGGG +
Preference number: 6 (lower is better)
Translates to: YRGLVVMLLCVT*VFAVHQAGVAG
Trigger: CCCAGCAACCCCAGCTTGATGGACAGCGAAAACCCAAGTGACACAAAGGAGCATCACCACCAATCCTCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000628426.1
CDS CAA 90 bp TGTATTCATCTTGCTCTGCTCCTTTGCAGAGCTGGCCTGCAGTCCTaGATGGATCTGGTGTGCGGCCAGGTCAAAGAGGTCCAGATAATC +
Preference number: 6 (lower is better)
Translates to: CIHLALLLCRAGLQS*MDLVCGQVKEVQII
Trigger: GATTATCTGGACCTCTTTGACCTGGCCGCACACCAGATCCATCAAGGACTGCAGGCCAGCTCTGCAAAGGAGCAGAGCAAGATGAATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000628426.1
CDS CAA 72 bp TTACAGAGGATTGGTGGTGATGCTCCTTTGTGTCACTaGGGTTTTCGCTGTCCATCAAGCTGGGGTTGCTGG +
Preference number: 6 (lower is better)
Translates to: LQRIGGDAPLCH*GFRCPSSWGCW
Trigger: CCAGCAACCCCAGCTTGATGGACAGCGAAAACCCAAGTGACACAAAGGAGCATCACCACCAATCCTCTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000628426.1
CDS TCA 72 bp ATGGATGGATTGCCATGCCATCCACGGAGGCATCTGTaGAGATCTCCCCTTTTACATCCTGAGTACCTTTGG +
Preference number: 6 (lower is better)
Translates to: MDGLPCHPRRHL*RSPLLHPEYLW
Trigger: CCAAAGGTACTCAGGATGTAAAAGGGGAGATCTTCACAGATGCCTCCGTGGATGGCATGGCAATCCATCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000462406.1
ENST00000628426.1
CDS GCA 72 bp CCCGATAATGATTGTATTCATCTTGCTCTGCTCCTTTaGAGAGCTGGCCTGCAGTCCTTGATGGATCTGGTG +
Preference number: 6 (lower is better)
Translates to: PDNDCIHLALLL*RAGLQSLMDLV
Trigger: CACCAGATCCATCAAGGACTGCAGGCCAGCTCTGCAAAGGAGCAGAGCAAGATGAATACAATCATTATCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000628426.1
CDS GCA 72 bp TGTTCCTATGCTGAAACGCAAACCCACAATGCCGCTTaGATAATAACAACAAACCAGCTCCTTCTGCCAGGG +
Preference number: 6 (lower is better)
Translates to: CSYAETQTHNAA*IITTNQLLLPG
Trigger: CCCTGGCAGAAGGAGCTGGTTTGTTGTTATTATGCAAGCGGCATTGTGGGTTTGCGTTTCAGCATAGGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476765.1
ENST00000628426.1
CDS CAA 90 bp CTTCTGTCACTTTCTCATGGAAGTCGTCCGCGGATTTATTCGAACTaGCAAAGTAGAGATAGTCTGAGTACAACCTCTCCACAGGGTCCC +
Preference number: 6 (lower is better)
Translates to: LLSLSHGSRPRIYSN*QSRDSLSTTSPQGP
Trigger: GGGACCCTGTGGAGAGGTTGTACTCAGACTATCTCTACTTTGCAAGTTCGAATAAATCCGCGGACGACTTCCATGAGAAAGTGACAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000476765.1
ENST00000628426.1
CDS GCA 72 bp CTGGAAGACCTTGTGCATGGTGTACTTGACGTTGGATaGATGATCTTCCAGGCGAAGAATGAGAAACTGTTG +
Preference number: 6 (lower is better)
Translates to: LEDLVHGVLDVG*MIFQAKNEKLL
Trigger: CAACAGTTTCTCATTCTTCGCCTGGAAGATCATGCATCCAACGTCAAGTACACCATGCACAAGGTCTTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346248.7
ENST00000435907.6
CDS CAA 90 bp TCATGTATGAAATATTATTTACAGAGGATTGGTGGTGATGCTCCTTaGTGTCACTTGGGTTTTCGCTGTCCATCAAGCTGGGGTTGCTGG +
Preference number: 6 (lower is better)
Translates to: SCMKYYLQRIGGDAP*CHLGFRCPSSWGCW
Trigger: CCAGCAACCCCAGCTTGATGGACAGCGAAAACCCAAGTGACACAAAGGAGCATCACCACCAATCCTCTGTAAATAATATTTCATACATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000628426.1
CDS CAA 72 bp CTTTCTCATGGAAGTCGTCCGCGGATTTATTCGAACTaGCAAAGTAGAGATAGTCTGAGTACAACCTCTCCA +
Preference number: 6 (lower is better)
Translates to: LSHGSRPRIYSN*QSRDSLSTTSP
Trigger: TGGAGAGGTTGTACTCAGACTATCTCTACTTTGCAAGTTCGAATAAATCCGCGGACGACTTCCATGAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000476765.1
ENST00000628426.1
CDS CAA 72 bp AAATATTATTTACAGAGGATTGGTGGTGATGCTCCTTaGTGTCACTTGGGTTTTCGCTGTCCATCAAGCTGG +
Preference number: 6 (lower is better)
Translates to: KYYLQRIGGDAP*CHLGFRCPSSW
Trigger: CCAGCTTGATGGACAGCGAAAACCCAAGTGACACAAAGGAGCATCACCACCAATCCTCTGTAAATAATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000628426.1
CDS TCA 72 bp ATTTGCACATTAAAACGCTTCTCTCTGTTCCTATGCTaGAACGCAAACCCACAATGCCGCTTGCATAATAAC +
Preference number: 6 (lower is better)
Translates to: ICTLKRFSLFLC*NANPQCRLHNN
Trigger: GTTATTATGCAAGCGGCATTGTGGGTTTGCGTTTCAGCATAGGAACAGAGAGAAGCGTTTTAATGTGCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476765.1
ENST00000628426.1
CDS GCA 72 bp AAAATAAGCAGACACCACAGCACTAGAGAAAGAGGGTaGACATTCTTTGGTTCAGCTCCGAAAGAAAACAAA +
Preference number: 6 (lower is better)
Translates to: KISRHHSTRERG*TFFGSAPKENK
Trigger: TTTGTTTTCTTTCGGAGCTGAACCAAAGAATGTGCACCCTCTTTCTCTAGTGCTGTGGTGTCTGCTTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000462406.1
ENST00000628426.1
CDS TCA 72 bp TTCATGTATGAAATATTATTTACAGAGGATTGGTGGTaGTGCTCCTTTGTGTCACTTGGGTTTTCGCTGTCC +
Preference number: 6 (lower is better)
Translates to: FMYEILFTEDWW*CSFVSLGFSLS
Trigger: GGACAGCGAAAACCCAAGTGACACAAAGGAGCATCACCACCAATCCTCTGTAAATAATATTTCATACATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346248.7
ENST00000435907.6
ENST00000628426.1