RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHST11 (Homo sapiens)

Ensembl gene IDs: ENSG00000171310

Ensembl transcript IDs: ENST00000303694.6, ENST00000546689.1, ENST00000547956.1, ENST00000549016.1, ENST00000549260.5, ENST00000550711.1

Found 591 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCAAGCAGAGTGCCTCTGCTTCTTCTGCCAACTCTATCTCAGCACTaGTCCAGACCCCACCAGCCAAGCATTTGTGGGACCCGCACACTT +
Preference number: 1 (lower is better)
Translates to: ASRVPLLLLPTLSQH*SRPHQPSICGTRTL
Trigger: AAGTGTGCGGGTCCCACAAATGCTTGGCTGGTGGGGTCTGGATCAGTGCTGAGATAGAGTTGGCAGAAGAAGCAGAGGCACTCTGCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CCA 90 bp CAGACCCCACCAGCCAAGCATTTGTGGGACCCGCACACTTTGCTCTaGAGCTTTCTAGTAGCCTGGATTAATCGACCCCTGTGCTTCATG +
Preference number: 1 (lower is better)
Translates to: QTPPAKHLWDPHTLL*SFLVAWINRPLCFM
Trigger: CATGAAGCACAGGGGTCGATTAATCCAGGCTACTAGAAAGCTCCAGAGCAAAGTGTGCGGGTCCCACAAATGCTTGGCTGGTGGGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CCA 90 bp CCTGGCTGTACCTGGTCTTTAAAACACAGCAGCACCTTTGAGAAGTaGCTGGGAGATGGGACGCCTGCCTGTACTTTTCTCCAGCTAAGC +
Preference number: 1 (lower is better)
Translates to: PGCTWSLKHSSTFEK*LGDGTPACTFLQLS
Trigger: GCTTAGCTGGAGAAAAGTACAGGCAGGCGTCCCATCTCCCAGCCACTTCTCAAAGGTGCTGCTGTGTTTTAAAGACCAGGTACAGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CCA 90 bp GATGTGGTCAGTCCTGCTGACATAGAGGTGGGCAAGGAAGGGATTTaGTCACTGGGATTGCACAGAATGGCGCAGCTGAGATTGTGTGTG +
Preference number: 1 (lower is better)
Translates to: DVVSPADIEVGKEGI*SLGLHRMAQLRLCV
Trigger: CACACACAATCTCAGCTGCGCCATTCTGTGCAATCCCAGTGACCAAATCCCTTCCTTGCCCACCTCTATGTCAGCAGGACTGACCACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR TCA 90 bp ATACTGCCCTGGCTGTACCTGGTCTTTAAAACACAGCAGCACCTTTaGGAAGTGGCTGGGAGATGGGACGCCTGCCTGTACTTTTCTCCA +
Preference number: 1 (lower is better)
Translates to: ILPWLYLVFKTQQHL*EVAGRWDACLYFSP
Trigger: TGGAGAAAAGTACAGGCAGGCGTCCCATCTCCCAGCCACTTCTCAAAGGTGCTGCTGTGTTTTAAAGACCAGGTACAGCCAGGGCAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR GCA 90 bp AGAGGAAATGGGGCATGGATTATGGAAGGCTGTCCTTGCTGCTCATaGATGGCAGTTACCAAGATGCTGATAGTCTTTCAGCCTCTGGAG +
Preference number: 1 (lower is better)
Translates to: RGNGAWIMEGCPCCS*MAVTKMLIVFQPLE
Trigger: CTCCAGAGGCTGAAAGACTATCAGCATCTTGGTAACTGCCATGCATGAGCAGCAAGGACAGCCTTCCATAATCCATGCCCCATTTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR GCA 90 bp GCTTCCAGAGGAAATGGGGCATGGATTATGGAAGGCTGTCCTTGCTaGTCATGCATGGCAGTTACCAAGATGCTGATAGTCTTTCAGCCT +
Preference number: 1 (lower is better)
Translates to: ASRGNGAWIMEGCPC*SCMAVTKMLIVFQP
Trigger: AGGCTGAAAGACTATCAGCATCTTGGTAACTGCCATGCATGAGCAGCAAGGACAGCCTTCCATAATCCATGCCCCATTTCCTCTGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR GCA 90 bp CAGGCTTCCAGAGGAAATGGGGCATGGATTATGGAAGGCTGTCCTTaGTGCTCATGCATGGCAGTTACCAAGATGCTGATAGTCTTTCAG +
Preference number: 1 (lower is better)
Translates to: QASRGNGAWIMEGCP*CSCMAVTKMLIVFQ
Trigger: CTGAAAGACTATCAGCATCTTGGTAACTGCCATGCATGAGCAGCAAGGACAGCCTTCCATAATCCATGCCCCATTTCCTCTGGAAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CCA 90 bp AATCAACCACAGCACTCTTCCACACTGTGCCTGGAGAATCCATTCTaGGGCTTAAAGGCAGACATTACCCATCAGTTGGAGCAGGCACAT +
Preference number: 1 (lower is better)
Translates to: NQPQHSSTLCLENPF*GLKADITHQLEQAH
Trigger: ATGTGCCTGCTCCAACTGATGGGTAATGTCTGCCTTTAAGCCCCAGAATGGATTCTCCAGGCACAGTGTGGAAGAGTGCTGTGGTTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR GCA 90 bp ACTTTGCTCTGGAGCTTTCTAGTAGCCTGGATTAATCGACCCCTGTaGTTCATGCCTTTGCCACCAGGAGAACCAGTGCAACTGAAGTTT +
Preference number: 1 (lower is better)
Translates to: TLLWSFLVAWINRPL*FMPLPPGEPVQLKF
Trigger: AAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAAGGCATGAAGCACAGGGGTCGATTAATCCAGGCTACTAGAAAGCTCCAGAGCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CCA 90 bp ATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACGTaGCAAGCAGTAGAAGACAACACTTCTACATGGGGATGTGGTGCT +
Preference number: 1 (lower is better)
Translates to: IPKCTSLTLAFHTCT*QAVEDNTSTWGCGA
Trigger: AGCACCACATCCCCATGTAGAAGTGTTGTCTTCTACTGCTTGCCACGTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CCA 90 bp GAACAGGAAATGAAAAGTTTCCAGGCTTCCAGAGGAAATGGGGCATaGATTATGGAAGGCTGTCCTTGCTGCTCATGCATGGCAGTTACC +
Preference number: 1 (lower is better)
Translates to: EQEMKSFQASRGNGA*IMEGCPCCSCMAVT
Trigger: GGTAACTGCCATGCATGAGCAGCAAGGACAGCCTTCCATAATCCATGCCCCATTTCCTCTGGAAGCCTGGAAACTTTTCATTTCCTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CCA 90 bp CTAAGTCAACCTAAGCAAAGTATACTCGGTGGAACCCTAGCTCTGTaGGGTGATCTGCAAAATAGAGTATCCTGGTCATGTAAGTTCAGG +
Preference number: 1 (lower is better)
Translates to: LSQPKQSILGGTLAL*GDLQNRVSWSCKFR
Trigger: CCTGAACTTACATGACCAGGATACTCTATTTTGCAGATCACCCCACAGAGCTAGGGTTCCACCGAGTATACTTTGCTTAGGTTGACTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR TCA 90 bp TCAAGAATGGTGGCATCCATACACATGACAATGGCTGTTATCACATaGCTCCATGAGAGGTTAGTAAGGAGAACATTCATGCCCCCAAAT +
Preference number: 1 (lower is better)
Translates to: SRMVASIHMTMAVIT*LHERLVRRTFMPPN
Trigger: ATTTGGGGGCATGAATGTTCTCCTTACTAACCTCTCATGGAGTCATGTGATAACAGCCATTGTCATGTGTATGGATGCCACCATTCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR TCA 90 bp TTTGCTAATTGTCGAGCTGGATGCTCTATGTCACATAAAGCTTTTTaGGGGCCAAGACTATTGGGTTTGTTCAACGCTCTATCTTCAGGG +
Preference number: 1 (lower is better)
Translates to: FANCRAGCSMSHKAF*GPRLLGLFNALSSG
Trigger: CCCTGAAGATAGAGCGTTGAACAAACCCAATAGTCTTGGCCCTCAAAAAGCTTTATGTGACATAGAGCATCCAGCTCGACAATTAGCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR GCA 90 bp GCAGTATTCACTTCTACAGACAAGGACGACCCATCCTATTTCCCCTaGAAAGACAGCTGTCCTTCCCTACGAAGGATTTTAAATAATTCT +
Preference number: 1 (lower is better)
Translates to: AVFTSTDKDDPSYFP*KDSCPSLRRILNNS
Trigger: AGAATTATTTAAAATCCTTCGTAGGGAAGGACAGCTGTCTTTGCAGGGGAAATAGGATGGGTCGTCCTTGTCTGTAGAAGTGAATACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR GCA 90 bp TTGAGACTGTTAATCTCAGGAGTTCAAACCCTGGGCAGGTCTGAATaGTTAGCACTAAACCTAGGCATTTCTCTAATTCTAAACATCCCC +
Preference number: 1 (lower is better)
Translates to: LRLLISGVQTLGRSE*LALNLGISLILNIP
Trigger: GGGGATGTTTAGAATTAGAGAAATGCCTAGGTTTAGTGCTAAGCATTCAGACCTGCCCAGGGTTTGAACTCCTGAGATTAACAGTCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547956.1
3UTR CCA 90 bp GGTGGAACCCTAGCTCTGTGGGGTGATCTGCAAAATAGAGTATCCTaGTCATGTAAGTTCAGGAAATGCTACAGACTCAAGGATTATTTT +
Preference number: 1 (lower is better)
Translates to: GGTLALWGDLQNRVS*SCKFRKCYRLKDYF
Trigger: AAAATAATCCTTGAGTCTGTAGCATTTCCTGAACTTACATGACCAGGATACTCTATTTTGCAGATCACCCCACAGAGCTAGGGTTCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR TCA 90 bp TCTTTAGTGCAAGGGACTTTCAGGTCGATTGGAATTGGTTTGGAATaGGTCCCTTGCAAAGATGACTCTAAGTGCAATAGCAACCTACTT +
Preference number: 1 (lower is better)
Translates to: SLVQGTFRSIGIGLE*VPCKDDSKCNSNLL
Trigger: AAGTAGGTTGCTATTGCACTTAGAGTCATCTTTGCAAGGGACTCATTCCAAACCAATTCCAATCGACCTGAAAGTCCCTTGCACTAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR GCA 90 bp AATTCATGGAATTCACCAGAACACAAGAAACCTTTGAGACAGTGTTaGAGTATTCACTTCTACAGACAAGGACGACCCATCCTATTTCCC +
Preference number: 1 (lower is better)
Translates to: NSWNSPEHKKPLRQC*SIHFYRQGRPILFP
Trigger: GGGAAATAGGATGGGTCGTCCTTGTCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGAATTCCATGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CCA 90 bp CTGGATGCTCTATGTCACATAAAGCTTTTTGAGGGCCAAGACTATTaGGTTTGTTCAACGCTCTATCTTCAGGGCCTAGTATATAGTAGA +
Preference number: 1 (lower is better)
Translates to: LDALCHIKLFEGQDY*VCSTLYLQGLVYSR
Trigger: TCTACTATATACTAGGCCCTGAAGATAGAGCGTTGAACAAACCCAATAGTCTTGGCCCTCAAAAAGCTTTATGTGACATAGAGCATCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR TCA 90 bp GGAGTAGGGAGCCACCCTGGGCCCTATACCCCACTCACCCTCTCCTCTCTTCCTACAGTAGGAGGCACTTaGGGAGTGTTCCCCTTTCCT +
Preference number: 2 (lower is better)
Translates to: GVGSHPGPYTPLTLSSLPTVGGT*GVFPFP
Trigger: AGGAAAGGGGAACACTCCTCAAGTGCCTCCTACTGT...AGGAAGAGAGGAGAGGGTGAGTGGGGTATAGGGCCCAGGGTGGCTCCCTACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR TCA 90 bp GGAGTAGGGAGCCACCCTGGGCCCTATACCCCACTCACCCTCTCCTCTCTTCCTATTCATGCCCCCAAATaGGCTGTAGCAAGCAAAGCA +
Preference number: 2 (lower is better)
Translates to: GVGSHPGPYTPLTLSSLPIHAPK*AVASKA
Trigger: TGCTTTGCTTGCTACAGCTCATTTGGGGGCATGAAT...AGGAAGAGAGGAGAGGGTGAGTGGGGTATAGGGCCCAGGGTGGCTCCCTACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CCA 90 bp GGAGTAGGGAGCCACCCTGGGCCCTATACCCCACTCACCCTCTCCTCTCTTCCTGGAACCCTAGCTCTGTaGGGTGATCTGCAAAATAGA +
Preference number: 2 (lower is better)
Translates to: GVGSHPGPYTPLTLSSLPGTLAL*GDLQNR
Trigger: TCTATTTTGCAGATCACCCCACAGAGCTAGGGTTCC...AGGAAGAGAGGAGAGGGTGAGTGGGGTATAGGGCCCAGGGTGGCTCCCTACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CAA 90 bp CTGATCCAGACCCCACCAGCCAAGCATTTGTGGGACCCGCACACTTaGCTCTGGAGCTTTCTAGTAGCCTGGATTAATCGACCCCTGTGC +
Preference number: 2 (lower is better)
Translates to: LIQTPPAKHLWDPHT*LWSFLVAWINRPLC
Trigger: GCACAGGGGTCGATTAATCCAGGCTACTAGAAAGCTCCAGAGCAAAGTGTGCGGGTCCCACAAATGCTTGGCTGGTGGGGTCTGGATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CAA 90 bp GCCAACTCTATCTCAGCACTGATCCAGACCCCACCAGCCAAGCATTaGTGGGACCCGCACACTTTGCTCTGGAGCTTTCTAGTAGCCTGG +
Preference number: 2 (lower is better)
Translates to: ANSISALIQTPPAKH*WDPHTLLWSFLVAW
Trigger: CCAGGCTACTAGAAAGCTCCAGAGCAAAGTGTGCGGGTCCCACAAATGCTTGGCTGGTGGGGTCTGGATCAGTGCTGAGATAGAGTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR TCA 90 bp TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGGAGGACTGGCTAGTGGCATCCACATCCTaGATAGGCAGGAGGGTGCAG +
Preference number: 2 (lower is better)
Translates to: LCVCVCVCVCVCVGEDWLVASTS*IGRRVQ
Trigger: CTGCACCCTCCTGCCTATTCAGGATGTGGATGCCAC...TAGCCAGTCCTCCCCTACACACACACACACACACACACACACACACACACACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CAA 90 bp AAGAAGCACTCATCAAGAGATCATCTGTTCCCACTGAGCATCCTTTaGAGCCTGAGGAGTAGGGAGCCACCCTGGGCCCTATACCCCACT +
Preference number: 2 (lower is better)
Translates to: KKHSSRDHLFPLSIL*SLRSREPPWALYPT
Trigger: AGTGGGGTATAGGGCCCAGGGTGGCTCCCTACTCCTCAGGCTCAAAAGGATGCTCAGTGGGAACAGATGATCTCTTGATGAGTGCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CAA 90 bp CCTGCTGACATAGAGGTGGGCAAGGAAGGGATTTGGTCACTGGGATaGCACAGAATGGCGCAGCTGAGATTGTGTGTGTGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: PADIEVGKEGIWSLG*HRMAQLRLCVCVCV
Trigger: CACACACACACACACACACAATCTCAGCTGCGCCATTCTGTGCAATCCCAGTGACCAAATCCCTTCCTTGCCCACCTCTATGTCAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CAA 90 bp GGCCTTGTTGCCTGTAGGGTTCTAACTGGTTGTGATGGAAAAAGGTaGGAGGAAATGCTGGTGGTGGGAACTCGGGGGAGTGATGTGGTC +
Preference number: 2 (lower is better)
Translates to: GLVACRVLTGCDGKR*EEMLVVGTRGSDVV
Trigger: GACCACATCACTCCCCCGAGTTCCCACCACCAGCATTTCCTCCAACCTTTTTCCATCACAACCAGTTAGAACCCTACAGGCAACAAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR GCA 90 bp TGCCAACTCTATCTCAGCACTGATCCAGACCCCACCAGCCAAGCATTTGTGGGAGAAGGCTGTCCTTGCTaGTCATGCATGGCAGTTACC +
Preference number: 2 (lower is better)
Translates to: CQLYLSTDPDPTSQAFVGEGCPC*SCMAVT
Trigger: GGTAACTGCCATGCATGAGCAGCAAGGACAGCCTTC...TCCCACAAATGCTTGGCTGGTGGGGTCTGGATCAGTGCTGAGATAGAGTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR GCA 90 bp CCCCTGTGCTTCATGCCTTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCACAAGGGTATAGTTGCTaGGCCCTTCACAAAGGGGAG +
Preference number: 2 (lower is better)
Translates to: PLCFMPLPPGEPVQLKFPQGYSC*ALHKGE
Trigger: CTCCCCTTTGTGAAGGGCGCAGCAACTATACCCTTG...TGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAAGGCATGAAGCACAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR GCA 90 bp GGAGTAGGGAGCCACCCTGGGCCCTATACCCCACTCACCCTCTCCTCTCTTCCTAGGCTGAAAAGTCCTTaGAGAAAGGAAACTGACTTA +
Preference number: 2 (lower is better)
Translates to: GVGSHPGPYTPLTLSSLPRLKSP*RKETDL
Trigger: TAAGTCAGTTTCCTTTCTGCAAGGACTTTTCAGCCT...AGGAAGAGAGGAGAGGGTGAGTGGGGTATAGGGCCCAGGGTGGCTCCCTACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CCA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTAGTAGGGAGCCACCCTaGGCCCTATACCCCACTCAC +
Preference number: 2 (lower is better)
Translates to: CYQPRVKRILEGLVACRVSREPP*ALYPTH
Trigger: GTGAGTGGGGTATAGGGCCCAGGGTGGCTCCCTACT...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CCA 90 bp TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGGAGGACTGGCTACCAGCCAAGCATTTGTaGGACCCGCACACTTTGCTC +
Preference number: 2 (lower is better)
Translates to: LCVCVCVCVCVCVGEDWLPAKHL*DPHTLL
Trigger: GAGCAAAGTGTGCGGGTCCCACAAATGCTTGGCTGG...TAGCCAGTCCTCCCCTACACACACACACACACACACACACACACACACACACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CAA 90 bp GAAGGGATTTGGTCACTGGGATTGCACAGAATGGCGCAGCTGAGATaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGGAG +
Preference number: 2 (lower is better)
Translates to: EGIWSLGLHRMAQLR*CVCVCVCVCVCVGE
Trigger: CTCCCCTACACACACACACACACACACACACACACACACACACAATCTCAGCTGCGCCATTCTGTGCAATCCCAGTGACCAAATCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR TCA 90 bp GCCTGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGCAGGCTTGCACAACTaGCCAAAGACGGACACAGAA +
Preference number: 2 (lower is better)
Translates to: ACYQPRVKRILEGLVACRAGLHN*PKTDTE
Trigger: TTCTGTGTCCGTCTTTGGTCAGTTGTGCAAGCCTGC...CCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR TCA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTGAGGAACGTCCCCTCTaGGATACCACAGGTCAGCAG +
Preference number: 2 (lower is better)
Translates to: CYQPRVKRILEGLVACRVEERPL*DTTGQQ
Trigger: CTGCTGACCTGTGGTATCTCAGAGGGGACGTTCCTC...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR GCA 90 bp TGTGGTGCTAGGCTGAATGGAGATGACAGTAGGAGGCACTTGAGGAGTGTTCCCCCATCCTATTTCCCCTaGAAAGACAGCTGTCCTTCC +
Preference number: 2 (lower is better)
Translates to: CGARLNGDDSRRHLRSVPPSYFP*KDSCPS
Trigger: GGAAGGACAGCTGTCTTTGCAGGGGAAATAGGATGG...GGGAACACTCCTCAAGTGCCTCCTACTGTCATCTCCATTCAGCCTAGCACCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR GCA 90 bp CCCCTGTGCTTCATGCCTTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCAATGGAAGGCTGTCCTTaGTGCTCATGCATGGCAGTT +
Preference number: 2 (lower is better)
Translates to: PLCFMPLPPGEPVQLKFPMEGCP*CSCMAV
Trigger: AACTGCCATGCATGAGCAGCAAGGACAGCCTTCCAT...TGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAAGGCATGAAGCACAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR GCA 90 bp GGAGTAGGGAGCCACCCTGGGCCCTATACCCCACTCACCCTCTCCTCTCTTCCTATAAAGTACCTCTGTTaGTATAAACCAGATGGAGAC +
Preference number: 2 (lower is better)
Translates to: GVGSHPGPYTPLTLSSLPIKYLC*YKPDGD
Trigger: GTCTCCATCTGGTTTATAGCAACAGAGGTACTTTAT...AGGAAGAGAGGAGAGGGTGAGTGGGGTATAGGGCCCAGGGTGGCTCCCTACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CCA 90 bp CCCCTGTGCTTCATGCCTTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCAATGGGGCATGGATTATaGAAGGCTGTCCTTGCTGCT +
Preference number: 2 (lower is better)
Translates to: PLCFMPLPPGEPVQLKFPMGHGL*KAVLAA
Trigger: AGCAGCAAGGACAGCCTTCCATAATCCATGCCCCAT...TGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAAGGCATGAAGCACAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CCA 90 bp TGCCAACTCTATCTCAGCACTGATCCAGACCCCACCAGCCAAGCATTTGTGGGAGGCTTCCAGAGGAAATaGGGCATGGATTATGGAAGG +
Preference number: 2 (lower is better)
Translates to: CQLYLSTDPDPTSQAFVGGFQRK*GMDYGR
Trigger: CCTTCCATAATCCATGCCCCATTTCCTCTGGAAGCC...TCCCACAAATGCTTGGCTGGTGGGGTCTGGATCAGTGCTGAGATAGAGTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CCA 90 bp GCCTGTAGGGTTCTAACTGGTTGTGATGGAAAAAGGTTGGAGGAAATGCTGGTGCCTTTGAGAAGTGGCTaGGAGATGGGACGCCTGCCT +
Preference number: 2 (lower is better)
Translates to: ACRVLTGCDGKRLEEMLVPLRSG*EMGRLP
Trigger: AGGCAGGCGTCCCATCTCCCAGCCACTTCTCAAAGG...CACCAGCATTTCCTCCAACCTTTTTCCATCACAACCAGTTAGAACCCTACAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CAA 90 bp AGCTTTCTAGTAGCCTGGATTAATCGACCCCTGTGCTTCATGCCTTaGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCACTGCCTGCT +
Preference number: 2 (lower is better)
Translates to: SFLVAWINRPLCFMP*PPGEPVQLKFPLPA
Trigger: AGCAGGCAGTGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAAGGCATGAAGCACAGGGGTCGATTAATCCAGGCTACTAGAAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR TCA 90 bp TGTGGTGCTAGGCTGAATGGAGATGACAGTAGGAGGCACTTGAGGAGTGTTCCCTTTTCTGTTGGTCAGTaGGCTTGGGATCACTCACGA +
Preference number: 2 (lower is better)
Translates to: CGARLNGDDSRRHLRSVPFSVGQ*AWDHSR
Trigger: TCGTGAGTGATCCCAAGCTCACTGACCAACAGAAAA...GGGAACACTCCTCAAGTGCCTCCTACTGTCATCTCCATTCAGCCTAGCACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR GCA 90 bp TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGGAGGACTGGCTACACTCTTCCACACTGTaGCTGGAGAATCCATTCTGG +
Preference number: 2 (lower is better)
Translates to: LCVCVCVCVCVCVGEDWLHSSTL*LENPFW
Trigger: CCAGAATGGATTCTCCAGGCACAGTGTGGAAGAGTG...TAGCCAGTCCTCCCCTACACACACACACACACACACACACACACACACACACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR GCA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTGAAGTTTCCACTGCCTaGTGCTCTCCTGTGGCATCC +
Preference number: 2 (lower is better)
Translates to: CYQPRVKRILEGLVACRVEVSTA*CSPVAS
Trigger: GGATGCCACAGGAGAGCAGCAGGCAGTGGAAACTTC...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CCA 90 bp TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGGAGGACTGGCTAGACAACACTTCTACATaGGGATGTGGTGCTAGGCTG +
Preference number: 2 (lower is better)
Translates to: LCVCVCVCVCVCVGEDWLDNTST*GCGARL
Trigger: CAGCCTAGCACCACATCCCCATGTAGAAGTGTTGTC...TAGCCAGTCCTCCCCTACACACACACACACACACACACACACACACACACACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CCA 90 bp CCCCTGTGCTTCATGCCTTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCAAGAGGAAATGGGGCATaGATTATGGAAGGCTGTCCT +
Preference number: 2 (lower is better)
Translates to: PLCFMPLPPGEPVQLKFPRGNGA*IMEGCP
Trigger: AGGACAGCCTTCCATAATCCATGCCCCATTTCCTCT...TGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAAGGCATGAAGCACAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CCA 90 bp CCCCTGTGCTTCATGCCTTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCAGGAACCCTAGCTCTGTaGGGTGATCTGCAAAATAGA +
Preference number: 2 (lower is better)
Translates to: PLCFMPLPPGEPVQLKFPGTLAL*GDLQNR
Trigger: TCTATTTTGCAGATCACCCCACAGAGCTAGGGTTCC...TGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAAGGCATGAAGCACAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CAA 90 bp CCAGGCTTCCAGAGGAAATGGGGCATGGATTATGGAAGGCTGTCCTaGCTGCTCATGCATGGCAGTTACCAAGATGCTGATAGTCTTTCA +
Preference number: 2 (lower is better)
Translates to: PGFQRKWGMDYGRLS*LLMHGSYQDADSLS
Trigger: TGAAAGACTATCAGCATCTTGGTAACTGCCATGCATGAGCAGCAAGGACAGCCTTCCATAATCCATGCCCCATTTCCTCTGGAAGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR TCA 90 bp TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGGAGGACTGGCTATTTTCTGTTGGTCAGTaGGCTTGGGATCACTCACGA +
Preference number: 2 (lower is better)
Translates to: LCVCVCVCVCVCVGEDWLFSVGQ*AWDHSR
Trigger: TCGTGAGTGATCCCAAGCTCACTGACCAACAGAAAA...TAGCCAGTCCTCCCCTACACACACACACACACACACACACACACACACACACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR GCA 90 bp AAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACGTGGCAAGCCACTTCACCTTCACTaGAACTGGCACCGCCAGTTT +
Preference number: 2 (lower is better)
Translates to: KSPSVRVSPWHFTLVRGKPLHLH*NWHRQF
Trigger: AAACTGGCGGTGCCAGTTGCAGTGAAGGTGAAGTGG...CTTGCCACGTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR GCA 90 bp GCCTGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGAGGACAGTGTTCTCTaGCTGGAAATAAGGTCCAGA +
Preference number: 2 (lower is better)
Translates to: ACYQPRVKRILEGLVACREDSVL*LEIRSR
Trigger: TCTGGACCTTATTTCCAGGCAGAGAACACTGTCCTC...CCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CCA 90 bp TGTGGTGCTAGGCTGAATGGAGATGACAGTAGGAGGCACTTGAGGAGTGTTCCCACATTACCCATCAGTTaGAGCAGGCACATGATAGGA +
Preference number: 2 (lower is better)
Translates to: CGARLNGDDSRRHLRSVPTLPIS*SRHMIG
Trigger: TCCTATCATGTGCCTGCTCCAACTGATGGGTAATGT...GGGAACACTCCTCAAGTGCCTCCTACTGTCATCTCCATTCAGCCTAGCACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CCA 90 bp TGCCAACTCTATCTCAGCACTGATCCAGACCCCACCAGCCAAGCATTTGTGGGAGTACGAGTCTCACCTTaGCATTTCACACTTGTACGT +
Preference number: 2 (lower is better)
Translates to: CQLYLSTDPDPTSQAFVGVRVSP*HFTLVR
Trigger: ACGTACAAGTGTGAAATGCCAAGGTGAGACTCGTAC...TCCCACAAATGCTTGGCTGGTGGGGTCTGGATCAGTGCTGAGATAGAGTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR TCA 90 bp TGCCAACTCTATCTCAGCACTGATCCAGACCCCACCAGCCAAGCATTTGTGGGATATCACATGACTCCATaGGAGGTTAGTAAGGAGAAC +
Preference number: 2 (lower is better)
Translates to: CQLYLSTDPDPTSQAFVGYHMTP*EVSKEN
Trigger: GTTCTCCTTACTAACCTCTCATGGAGTCATGTGATA...TCCCACAAATGCTTGGCTGGTGGGGTCTGGATCAGTGCTGAGATAGAGTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR TCA 90 bp TTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCACTGCCTGCTGCTCTCCTTGGCATCCATACACATaGCAATGGCTGTTATCACAT +
Preference number: 2 (lower is better)
Translates to: FATRRTSATEVSTACCSPWHPYT*QWLLSH
Trigger: ATGTGATAACAGCCATTGTCATGTGTATGGATGCCA...AGGAGAGCAGCAGGCAGTGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR TCA 90 bp TGCCAACTCTATCTCAGCACTGATCCAGACCCCACCAGCCAAGCATTTGTGGGATCACATAAAGCTTTTTaGGGGCCAAGACTATTGGGT +
Preference number: 2 (lower is better)
Translates to: CQLYLSTDPDPTSQAFVGSHKAF*GPRLLG
Trigger: ACCCAATAGTCTTGGCCCTCAAAAAGCTTTATGTGA...TCCCACAAATGCTTGGCTGGTGGGGTCTGGATCAGTGCTGAGATAGAGTTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR TCA 90 bp TTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCACTGCCTGCTGCTCTCCTTCACATAAAGCTTTTTaGGGGCCAAGACTATTGGGT +
Preference number: 2 (lower is better)
Translates to: FATRRTSATEVSTACCSPSHKAF*GPRLLG
Trigger: ACCCAATAGTCTTGGCCCTCAAAAAGCTTTATGTGA...AGGAGAGCAGCAGGCAGTGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR TCA 90 bp GCCTGTAGGGTTCTAACTGGTTGTGATGGAAAAAGGTTGGAGGAAATGCTGGTGGATGTGGTGCTAGGCTaGATGGAGATGACAGTAGGA +
Preference number: 2 (lower is better)
Translates to: ACRVLTGCDGKRLEEMLVDVVLG*MEMTVG
Trigger: TCCTACTGTCATCTCCATTCAGCCTAGCACCACATC...CACCAGCATTTCCTCCAACCTTTTTCCATCACAACCAGTTAGAACCCTACAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR GCA 90 bp ACGATTCCAAACTATGAAACTGAAGAAGCACTCATCAAGAGATCATCTGTTCCCTCCCCGGTGAGATGTTaGAGCTGCTGCCCACTGAGC +
Preference number: 2 (lower is better)
Translates to: TIPNYETEEALIKRSSVPSPVRC*SCCPLS
Trigger: GCTCAGTGGGCAGCAGCTGCAACATCTCACCGGGGA...GGGAACAGATGATCTCTTGATGAGTGCTTCTTCAGTTTCATAGTTTGGAATCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR GCA 90 bp TTAAGAGAGAGAAGCCAGATGAAAGGCCATCTTCACATGACAGTGAGCAGGCTTCAAGGGTATAGTTGCTaGGCCCTTCACAAAGGGGAG +
Preference number: 2 (lower is better)
Translates to: LRERSQMKGHLHMTVSRLQGYSC*ALHKGE
Trigger: CTCCCCTTTGTGAAGGGCGCAGCAACTATACCCTTG...AAGCCTGCTCACTGTCATGTGAAGATGGCCTTTCATCTGGCTTCTCTCTCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR GCA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTCATCAAGGGTATAGTTaGTGCGCCCTTCACAAAGGG +
Preference number: 2 (lower is better)
Translates to: CYQPRVKRILEGLVACRVHQGYS*CALHKG
Trigger: CCCTTTGTGAAGGGCGCAGCAACTATACCCTTGATG...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CCA 90 bp TGTGGTGCTAGGCTGAATGGAGATGACAGTAGGAGGCACTTGAGGAGTGTTCCCCGATTGGAATTGGTTTaGAATGAGTCCCTTGCAAAG +
Preference number: 2 (lower is better)
Translates to: CGARLNGDDSRRHLRSVPRLELV*NESLAK
Trigger: CTTTGCAAGGGACTCATTCCAAACCAATTCCAATCG...GGGAACACTCCTCAAGTGCCTCCTACTGTCATCTCCATTCAGCCTAGCACCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CCA 90 bp TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGGAGGACTGGCTACAGGTCGATTGGAATTaGTTTGGAATGAGTCCCTTG +
Preference number: 2 (lower is better)
Translates to: LCVCVCVCVCVCVGEDWLQVDWN*FGMSPL
Trigger: CAAGGGACTCATTCCAAACCAATTCCAATCGACCTG...TAGCCAGTCCTCCCCTACACACACACACACACACACACACACACACACACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CCA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTATGGGGCATGGATTATaGAAGGCTGTCCTTGCTGCT +
Preference number: 2 (lower is better)
Translates to: CYQPRVKRILEGLVACRVMGHGL*KAVLAA
Trigger: AGCAGCAAGGACAGCCTTCCATAATCCATGCCCCAT...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CCA 90 bp TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGGAGGACTGGCTAGCTGTAAGAGGGATGTaGCTCAAACTTCAACTGAGA +
Preference number: 2 (lower is better)
Translates to: LCVCVCVCVCVCVGEDWLAVRGM*LKLQLR
Trigger: TCTCAGTTGAAGTTTGAGCCACATCCCTCTTACAGC...TAGCCAGTCCTCCCCTACACACACACACACACACACACACACACACACACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CCA 90 bp TGCCAACTCTATCTCAGCACTGATCCAGACCCCACCAGCCAAGCATTTGTGGGACTCAAGGATTATTTTTaGGGATTCACCATGCACAGC +
Preference number: 2 (lower is better)
Translates to: CQLYLSTDPDPTSQAFVGLKDYF*GFTMHS
Trigger: GCTGTGCATGGTGAATCCCCAAAAATAATCCTTGAG...TCCCACAAATGCTTGGCTGGTGGGGTCTGGATCAGTGCTGAGATAGAGTTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR TCA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTATTCATGCCCCCAAATaGGCTGTAGCAAGCAAAGCA +
Preference number: 2 (lower is better)
Translates to: CYQPRVKRILEGLVACRVIHAPK*AVASKA
Trigger: TGCTTTGCTTGCTACAGCTCATTTGGGGGCATGAAT...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR TCA 90 bp GCCTGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGCTCATGTCAAGTCCATaGATAATATCAGGGGTTTGC +
Preference number: 2 (lower is better)
Translates to: ACYQPRVKRILEGLVACRLMSSP*IISGVC
Trigger: GCAAACCCCTGATATTATTCATGGACTTGACATGAG...CCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR TCA 90 bp ACCATTGCAAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACGATGTGGTGCTAGGCTaGATGGAGATGACAGTAGGA +
Preference number: 2 (lower is better)
Translates to: TIANPQVYESHLGISHLYDVVLG*MEMTVG
Trigger: TCCTACTGTCATCTCCATTCAGCCTAGCACCACATC...GTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTTGCAATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR TCA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTGGCTCAAACTTCAACTaGGAAGCATCAGCAATGGCT +
Preference number: 2 (lower is better)
Translates to: CYQPRVKRILEGLVACRVGSNFN*EASAMA
Trigger: AGCCATTGCTGATGCTTCTCAGTTGAAGTTTGAGCC...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR TCA 90 bp CCCCTGTGCTTCATGCCTTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCACCAAAAAGCACACAGTaGACGATTCCAAACTATGAA +
Preference number: 2 (lower is better)
Translates to: PLCFMPLPPGEPVQLKFPPKSTQ*TIPNYE
Trigger: TTCATAGTTTGGAATCGTTCACTGTGTGCTTTTTGG...TGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAAGGCATGAAGCACAGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR GCA 90 bp GCCTGTAGGGTTCTAACTGGTTGTGATGGAAAAAGGTTGGAGGAAATGCTGGTGCAAGCAGAGTGCCTCTaGTTCTTCTGCCAACTCTAT +
Preference number: 2 (lower is better)
Translates to: ACRVLTGCDGKRLEEMLVQAECL*FFCQLY
Trigger: ATAGAGTTGGCAGAAGAAGCAGAGGCACTCTGCTTG...CACCAGCATTTCCTCCAACCTTTTTCCATCACAACCAGTTAGAACCCTACAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CCA 90 bp TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGGAGGACTGGCTATTTCACACTTGTACGTaGCAAGCAGTAGAAGACAAC +
Preference number: 2 (lower is better)
Translates to: LCVCVCVCVCVCVGEDWLFHTCT*QAVEDN
Trigger: GTTGTCTTCTACTGCTTGCCACGTACAAGTGTGAAA...TAGCCAGTCCTCCCCTACACACACACACACACACACACACACACACACACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CCA 90 bp TTAAGAGAGAGAAGCCAGATGAAAGGCCATCTTCACATGACAGTGAGCAGGCTTGGCTTCCAGAGGAAATaGGGCATGGATTATGGAAGG +
Preference number: 2 (lower is better)
Translates to: LRERSQMKGHLHMTVSRLGFQRK*GMDYGR
Trigger: CCTTCCATAATCCATGCCCCATTTCCTCTGGAAGCC...AAGCCTGCTCACTGTCATGTGAAGATGGCCTTTCATCTGGCTTCTCTCTCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CCA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTCAACCTGATGCCTCCTaGAACCTGTGTTCTGTAGAA +
Preference number: 2 (lower is better)
Translates to: CYQPRVKRILEGLVACRVQPDAS*NLCSVE
Trigger: TTCTACAGAACACAGGTTCCAGGAGGCATCAGGTTG...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CAA 90 bp ATTGCAAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTaGTACGTGGCAAGCAGTAGAAGACAACACTTCTACATGGGGATG +
Preference number: 2 (lower is better)
Translates to: IANPQVYESHLGISH*YVASSRRQHFYMGM
Trigger: CATCCCCATGTAGAAGTGTTGTCTTCTACTGCTTGCCACGTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTTGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR TCA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTGGAATTGGTTTGGAATaGGTCCCTTGCAAAGATGAC +
Preference number: 2 (lower is better)
Translates to: CYQPRVKRILEGLVACRVGIGLE*VPCKDD
Trigger: GTCATCTTTGCAAGGGACTCATTCCAAACCAATTCC...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR TCA 90 bp AGTGAACGATTCCAAACTATGAAACTGAAGAAGCACTCATCAAGAGATCATCTGAGCCTCTGGAGGACGTaGGAGGGTGTGCATGTGTGT +
Preference number: 2 (lower is better)
Translates to: SERFQTMKLKKHSSRDHLSLWRT*EGVHVC
Trigger: ACACACATGCACACCCTCTCACGTCCTCCAGAGGCT...CAGATGATCTCTTGATGAGTGCTTCTTCAGTTTCATAGTTTGGAATCGTTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR GCA 90 bp TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGGAGGACTGGCTACCTTTGAGACAGTGTTaGAGTATTCACTTCTACAGA +
Preference number: 2 (lower is better)
Translates to: LCVCVCVCVCVCVGEDWLPLRQC*SIHFYR
Trigger: TCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGG...TAGCCAGTCCTCCCCTACACACACACACACACACACACACACACACACACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR GCA 90 bp GTGTTGGGGTGGCAGTTTTTATCCTTGAAGACCTCAGATATGCTAAGTCAACCTCACTCTTCCACACTGTaGCTGGAGAATCCATTCTGG +
Preference number: 2 (lower is better)
Translates to: VLGWQFLSLKTSDMLSQPHSSTL*LENPFW
Trigger: CCAGAATGGATTCTCCAGGCACAGTGTGGAAGAGTG...AGGTTGACTTAGCATATCTGAGGTCTTCAAGGATAAAAACTGCCACCCCAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR GCA 90 bp TTAAGAGAGAGAAGCCAGATGAAAGGCCATCTTCACATGACAGTGAGCAGGCTTTTTGGGGATTCACCATaGACAGCACACATTGAAGGC +
Preference number: 2 (lower is better)
Translates to: LRERSQMKGHLHMTVSRLFGDSP*TAHIEG
Trigger: GCCTTCAATGTGTGCTGTGCATGGTGAATCCCCAAA...AAGCCTGCTCACTGTCATGTGAAGATGGCCTTTCATCTGGCTTCTCTCTCTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CCA 90 bp TGCCTGGAGAATCCATTCTGGGGCTTAAAGGCAGACATTACCCATCAGTTGGAGCGATTGGAATTGGTTTaGAATGAGTCCCTTGCAAAG +
Preference number: 2 (lower is better)
Translates to: CLENPFWGLKADITHQLERLELV*NESLAK
Trigger: CTTTGCAAGGGACTCATTCCAAACCAATTCCAATCG...CTCCAACTGATGGGTAATGTCTGCCTTTAAGCCCCAGAATGGATTCTCCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CCA 90 bp AAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACGTGGCAAGCACCTTCACTGCAACTaGCACCGCCAGTTTAAAATT +
Preference number: 2 (lower is better)
Translates to: KSPSVRVSPWHFTLVRGKHLHCN*HRQFKI
Trigger: AATTTTAAACTGGCGGTGCCAGTTGCAGTGAAGGTG...CTTGCCACGTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CCA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTACATTACCCATCAGTTaGAGCAGGCACATGATAGGA +
Preference number: 2 (lower is better)
Translates to: CYQPRVKRILEGLVACRVTLPIS*SRHMIG
Trigger: TCCTATCATGTGCCTGCTCCAACTGATGGGTAATGT...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR TCA 90 bp GCCTGTAGGGTTCTAACTGGTTGTGATGGAAAAAGGTTGGAGGAAATGCTGGTGATGGCTGTTATCACATaGCTCCATGAGAGGTTAGTA +
Preference number: 2 (lower is better)
Translates to: ACRVLTGCDGKRLEEMLVMAVIT*LHERLV
Trigger: TACTAACCTCTCATGGAGTCATGTGATAACAGCCAT...CACCAGCATTTCCTCCAACCTTTTTCCATCACAACCAGTTAGAACCCTACAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR TCA 90 bp ACGATTCCAAACTATGAAACTGAAGAAGCACTCATCAAGAGATCATCTGTTCCCACAGTAGGAGGCACTTaGGGAGTGTTCCCCTTTCCT +
Preference number: 2 (lower is better)
Translates to: TIPNYETEEALIKRSSVPTVGGT*GVFPFP
Trigger: AGGAAAGGGGAACACTCCTCAAGTGCCTCCTACTGT...GGGAACAGATGATCTCTTGATGAGTGCTTCTTCAGTTTCATAGTTTGGAATCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CCA 90 bp GCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTCAAACTTCAACTGAGCACCTTCACTGCAACTaGCACCGCCAGTTTAAAATT +
Preference number: 2 (lower is better)
Translates to: ATNSFTSCKRDVAQTSTEHLHCN*HRQFKI
Trigger: AATTTTAAACTGGCGGTGCCAGTTGCAGTGAAGGTG...CTCAGTTGAAGTTTGAGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CCA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTGGCACACTTCACAAGTaGATTTCTTTAACCAAGGAC +
Preference number: 2 (lower is better)
Translates to: CYQPRVKRILEGLVACRVGTLHK*ISLTKD
Trigger: GTCCTTGGTTAAAGAAATCCACTTGTGAAGTGTGCC...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR TCA 90 bp GTGTTGGGGTGGCAGTTTTTATCCTTGAAGACCTCAGATATGCTAAGTCAACCTGGAATTGGTTTGGAATaGGTCCCTTGCAAAGATGAC +
Preference number: 2 (lower is better)
Translates to: VLGWQFLSLKTSDMLSQPGIGLE*VPCKDD
Trigger: GTCATCTTTGCAAGGGACTCATTCCAAACCAATTCC...AGGTTGACTTAGCATATCTGAGGTCTTCAAGGATAAAAACTGCCACCCCAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR TCA 90 bp GCCTGTAGGGTTCTAACTGGTTGTGATGGAAAAAGGTTGGAGGAAATGCTGGTGAAATGCAAAGCAACGTaGATTTCCATTGAAAACCCC +
Preference number: 2 (lower is better)
Translates to: ACRVLTGCDGKRLEEMLVKCKAT*ISIENP
Trigger: GGGGTTTTCAATGGAAATTCACGTTGCTTTGCATTT...CACCAGCATTTCCTCCAACCTTTTTCCATCACAACCAGTTAGAACCCTACAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR TCA 90 bp TTAATCTCAGGAGTTCAAACCCTGGGCAGGTCTGAATGCTTAGCACTAAACCTATACATAGAAAAAGGGTaGCGGAGAAAGCAACCACTG +
Preference number: 2 (lower is better)
Translates to: LISGVQTLGRSECLALNLYIEKG*RRKQPL
Trigger: CAGTGGTTGCTTTCTCCGTCACCCTTTTTCTATGTA...TAGGTTTAGTGCTAAGCATTCAGACCTGCCCAGGGTTTGAACTCCTGAGATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547956.1
3UTR-3UTR GCA 90 bp TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGGAGGACTGGCTATGTAAGTTCAGGAAATaGTACAGACTCAAGGATTAT +
Preference number: 2 (lower is better)
Translates to: LCVCVCVCVCVCVGEDWLCKFRK*YRLKDY
Trigger: ATAATCCTTGAGTCTGTAGCATTTCCTGAACTTACA...TAGCCAGTCCTCCCCTACACACACACACACACACACACACACACACACACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR GCA 90 bp AACTTGAGACTGTTAATCTCAGGAGTTCAAACCCTGGGCAGGTCTGAATGCTTACCACTGAAGGTAAAATaGCAGGCTGTGAAAGGAAGT +
Preference number: 2 (lower is better)
Translates to: NLRLLISGVQTLGRSECLPLKVK*QAVKGS
Trigger: ACTTCCTTTCACAGCCTGGCATTTTACCTTCAGTGG...TAAGCATTCAGACCTGCCCAGGGTTTGAACTCCTGAGATTAACAGTCTCAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547956.1
3UTR-3UTR CCA 90 bp GTGTTGGGGTGGCAGTTTTTATCCTTGAAGACCTCAGATATGCTAAGTCAACCTCTGGAGAATCCATTCTaGGGCTTAAAGGCAGACATT +
Preference number: 2 (lower is better)
Translates to: VLGWQFLSLKTSDMLSQPLENPF*GLKADI
Trigger: AATGTCTGCCTTTAAGCCCCAGAATGGATTCTCCAG...AGGTTGACTTAGCATATCTGAGGTCTTCAAGGATAAAAACTGCCACCCCAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CCA 90 bp TTAAGAGAGAGAAGCCAGATGAAAGGCCATCTTCACATGACAGTGAGCAGGCTTTTTCACACTTGTACGTaGCAAGCAGTAGAAGACAAC +
Preference number: 2 (lower is better)
Translates to: LRERSQMKGHLHMTVSRLFHTCT*QAVEDN
Trigger: GTTGTCTTCTACTGCTTGCCACGTACAAGTGTGAAA...AAGCCTGCTCACTGTCATGTGAAGATGGCCTTTCATCTGGCTTCTCTCTCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR TCA 90 bp TTAAGAGAGAGAAGCCAGATGAAAGGCCATCTTCACATGACAGTGAGCAGGCTTAGCAATGGCTGGAAATaGGAAGCATGTTTAGATGTT +
Preference number: 2 (lower is better)
Translates to: LRERSQMKGHLHMTVSRLSNGWK*EACLDV
Trigger: AACATCTAAACATGCTTCTCATTTCCAGCCATTGCT...AAGCCTGCTCACTGTCATGTGAAGATGGCCTTTCATCTGGCTTCTCTCTCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CAA 90 bp CAATTCATGGAATTCACCAGAACACAAGAAACCTTTGAGACAGTGTaGCAGTATTCACTTCTACAGACAAGGACGACCCATCCTATTTCC +
Preference number: 2 (lower is better)
Translates to: QFMEFTRTQETFETV*QYSLLQTRTTHPIS
Trigger: GGAAATAGGATGGGTCGTCCTTGTCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGAATTCCATGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CAA 90 bp TATGGAATGCACAATTCATGGAATTCACCAGAACACAAGAAACCTTaGAGACAGTGTTGCAGTATTCACTTCTACAGACAAGGACGACCC +
Preference number: 2 (lower is better)
Translates to: YGMHNSWNSPEHKKP*RQCCSIHFYRQGRP
Trigger: GGGTCGTCCTTGTCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGAATTCCATGAATTGTGCATTCCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR GCA 90 bp GTGTTGGGGTGGCAGTTTTTATCCTTGAAGACCTCAGATATGCTAAGTCAACCTCCCAGTAAAACACATTaGGTAAATCTCCATCCATCA +
Preference number: 2 (lower is better)
Translates to: VLGWQFLSLKTSDMLSQPPSKTH*VNLHPS
Trigger: TGATGGATGGAGATTTACGCAATGTGTTTTACTGGG...AGGTTGACTTAGCATATCTGAGGTCTTCAAGGATAAAAACTGCCACCCCAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR GCA 90 bp GCCTGTAGGGTTCTAACTGGTTGTGATGGAAAAAGGTTGGAGGAAATGCTGGTGCTGTGTTCTGTAGAATaGGTATTAGAAAATGTTGGA +
Preference number: 2 (lower is better)
Translates to: ACRVLTGCDGKRLEEMLVLCSVE*VLENVG
Trigger: TCCAACATTTTCTAATACGCATTCTACAGAACACAG...CACCAGCATTTCCTCCAACCTTTTTCCATCACAACCAGTTAGAACCCTACAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR GCA 90 bp GTGTTGGGGTGGCAGTTTTTATCCTTGAAGACCTCAGATATGCTAAGTCAACCTAGGCTGAAAAGTCCTTaGAGAAAGGAAACTGACTTA +
Preference number: 2 (lower is better)
Translates to: VLGWQFLSLKTSDMLSQPRLKSP*RKETDL
Trigger: TAAGTCAGTTTCCTTTCTGCAAGGACTTTTCAGCCT...AGGTTGACTTAGCATATCTGAGGTCTTCAAGGATAAAAACTGCCACCCCAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CCA 90 bp GTGTTGGGGTGGCAGTTTTTATCCTTGAAGACCTCAGATATGCTAAGTCAACCTGGAATGCACAATTCATaGAATTCACCAGAACACAAG +
Preference number: 2 (lower is better)
Translates to: VLGWQFLSLKTSDMLSQPGMHNS*NSPEHK
Trigger: CTTGTGTTCTGGTGAATTCCATGAATTGTGCATTCC...AGGTTGACTTAGCATATCTGAGGTCTTCAAGGATAAAAACTGCCACCCCAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CCA 90 bp AGTGAACGATTCCAAACTATGAAACTGAAGAAGCACTCATCAAGAGATCATCTGCAGGTCGATTGGAATTaGTTTGGAATGAGTCCCTTG +
Preference number: 2 (lower is better)
Translates to: SERFQTMKLKKHSSRDHLQVDWN*FGMSPL
Trigger: CAAGGGACTCATTCCAAACCAATTCCAATCGACCTG...CAGATGATCTCTTGATGAGTGCTTCTTCAGTTTCATAGTTTGGAATCGTTCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR TCA 72 bp CACCTGGTGCACAGGGAGGAGGAGGAACGTCCCCTCTaGGATACCACAGGTCAGCAGACCACCTCTTCCCAG +
Preference number: 3 (lower is better)
Translates to: HLVHREEEERPL*DTTGQQTTSSQ
Trigger: CTGGGAAGAGGTGGTCTGCTGACCTGTGGTATCTCAGAGGGGACGTTCCTCCTCCTCCCTGTGCACCAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CCA 72 bp AGCATCCTTTTGAGCCTGAGGAGTAGGGAGCCACCCTaGGCCCTATACCCCACTCACCCTCTCCTCTCTTCC +
Preference number: 3 (lower is better)
Translates to: SILLSLRSREPP*ALYPTHPLLSS
Trigger: GGAAGAGAGGAGAGGGTGAGTGGGGTATAGGGCCCAGGGTGGCTCCCTACTCCTCAGGCTCAAAAGGATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CAA 90 bp GGAGTAGGGAGCCACCCTGGGCCCTATACCCCACTCACCCTCTCCTCTCTTCCTCATGCACAGCACACATaGAAGGCTGAAAAGTCCTTG +
Preference number: 3 (lower is better)
Translates to: GVGSHPGPYTPLTLSSLPHAQHT*KAEKSL
Trigger: CAAGGACTTTTCAGCCTTCAATGTGTGCTGTGCATG...AGGAAGAGAGGAGAGGGTGAGTGGGGTATAGGGCCCAGGGTGGCTCCCTACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CAA 90 bp GGAGTAGGGAGCCACCCTGGGCCCTATACCCCACTCACCCTCTCCTCTCTTCCTTTAGCATCTTTTCTGTaGGTCAGTGAGCTTGGGATC +
Preference number: 3 (lower is better)
Translates to: GVGSHPGPYTPLTLSSLPLASFL*VSELGI
Trigger: GATCCCAAGCTCACTGACCAACAGAAAAGATGCTAA...AGGAAGAGAGGAGAGGGTGAGTGGGGTATAGGGCCCAGGGTGGCTCCCTACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CAA 90 bp TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGGAGGACTGGCTATTCCCCGGTGAGATGTaGCAGCTGCTGCCCACTGAG +
Preference number: 3 (lower is better)
Translates to: LCVCVCVCVCVCVGEDWLFPGEM*QLLPTE
Trigger: CTCAGTGGGCAGCAGCTGCAACATCTCACCGGGGAA...TAGCCAGTCCTCCCCTACACACACACACACACACACACACACACACACACACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CAA 90 bp GGAGTAGGGAGCCACCCTGGGCCCTATACCCCACTCACCCTCTCCTCTCTTCCTTTTAATGGAAGGGTGTaGGGGTGGCAGTTTTTATCC +
Preference number: 3 (lower is better)
Translates to: GVGSHPGPYTPLTLSSLPFNGRV*GWQFLS
Trigger: GGATAAAAACTGCCACCCCAACACCCTTCCATTAAA...AGGAAGAGAGGAGAGGGTGAGTGGGGTATAGGGCCCAGGGTGGCTCCCTACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR GCA 72 bp GGGGAGGACTGGCTAGGAAAGCAAGCAGAGTGCCTCTaGTTCTTCTGCCAACTCTATCTCAGCACTGATCCA +
Preference number: 3 (lower is better)
Translates to: GEDWLGKQAECL*FFCQLYLSTDP
Trigger: TGGATCAGTGCTGAGATAGAGTTGGCAGAAGAAGCAGAGGCACTCTGCTTGCTTTCCTAGCCAGTCCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CCA 72 bp CCAGCCAAGCATTTGTGGGACCCGCACACTTTGCTCTaGAGCTTTCTAGTAGCCTGGATTAATCGACCCCTG +
Preference number: 3 (lower is better)
Translates to: PAKHLWDPHTLL*SFLVAWINRPL
Trigger: CAGGGGTCGATTAATCCAGGCTACTAGAAAGCTCCAGAGCAAAGTGTGCGGGTCCCACAAATGCTTGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CCA 72 bp AGTCCTGCTGACATAGAGGTGGGCAAGGAAGGGATTTaGTCACTGGGATTGCACAGAATGGCGCAGCTGAGA +
Preference number: 3 (lower is better)
Translates to: SPADIEVGKEGI*SLGLHRMAQLR
Trigger: TCTCAGCTGCGCCATTCTGTGCAATCCCAGTGACCAAATCCCTTCCTTGCCCACCTCTATGTCAGCAGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CAA 90 bp CCCCTGTGCTTCATGCCTTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCATATGGAAGGCTGTCCTaGCTGCTCATGCATGGCAGT +
Preference number: 3 (lower is better)
Translates to: PLCFMPLPPGEPVQLKFPYGRLS*LLMHGS
Trigger: ACTGCCATGCATGAGCAGCAAGGACAGCCTTCCATA...TGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAAGGCATGAAGCACAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CAA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTTTCCCCGGTGAGATGTaGCAGCTGCTGCCCACTGAG +
Preference number: 3 (lower is better)
Translates to: CYQPRVKRILEGLVACRVFPGEM*QLLPTE
Trigger: CTCAGTGGGCAGCAGCTGCAACATCTCACCGGGGAA...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CAA 90 bp GCCTGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGCTGTGCTTCATGCCTTaGCCACCAGGAGAACCAGTG +
Preference number: 3 (lower is better)
Translates to: ACYQPRVKRILEGLVACRLCFMP*PPGEPV
Trigger: CACTGGTTCTCCTGGTGGCAAAGGCATGAAGCACAG...CCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR TCA 72 bp GGATTTGGTCACTGGGATTGCACAGAATGGCGCAGCTaGGATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: GFGHWDCTEWRS*DCVCVCVCVCV
Trigger: CACACACACACACACACACACACACACACAATCTCAGCTGCGCCATTCTGTGCAATCCCAGTGACCAAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR GCA 72 bp TGGAGCTTTCTAGTAGCCTGGATTAATCGACCCCTGTaGTTCATGCCTTTGCCACCAGGAGAACCAGTGCAA +
Preference number: 3 (lower is better)
Translates to: WSFLVAWINRPL*FMPLPPGEPVQ
Trigger: TTGCACTGGTTCTCCTGGTGGCAAAGGCATGAAGCACAGGGGTCGATTAATCCAGGCTACTAGAAAGCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CAA 90 bp CCCCTGTGCTTCATGCCTTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCAATGGACCTTCTGCTGTaGCTCATGAATAGTCCAAAC +
Preference number: 3 (lower is better)
Translates to: PLCFMPLPPGEPVQLKFPMDLLL*LMNSPN
Trigger: GTTTGGACTATTCATGAGCAACAGCAGAAGGTCCAT...TGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAAGGCATGAAGCACAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CAA 90 bp TGTGGTGCTAGGCTGAATGGAGATGACAGTAGGAGGCACTTGAGGAGTGTTCCCTTAGCATCTTTTCTGTaGGTCAGTGAGCTTGGGATC +
Preference number: 3 (lower is better)
Translates to: CGARLNGDDSRRHLRSVPLASFL*VSELGI
Trigger: GATCCCAAGCTCACTGACCAACAGAAAAGATGCTAA...GGGAACACTCCTCAAGTGCCTCCTACTGTCATCTCCATTCAGCCTAGCACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR GCA 72 bp GACATTGCTAATCAACCACAGCACTCTTCCACACTGTaGCTGGAGAATCCATTCTGGGGCTTAAAGGCAGAC +
Preference number: 3 (lower is better)
Translates to: DIANQPQHSSTL*LENPFWGLKAD
Trigger: GTCTGCCTTTAAGCCCCAGAATGGATTCTCCAGGCACAGTGTGGAAGAGTGCTGTGGTTGATTAGCAATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR GCA 72 bp AGAGGAAATGGGGCATGGATTATGGAAGGCTGTCCTTaGTGCTCATGCATGGCAGTTACCAAGATGCTGATA +
Preference number: 3 (lower is better)
Translates to: RGNGAWIMEGCP*CSCMAVTKMLI
Trigger: TATCAGCATCTTGGTAACTGCCATGCATGAGCAGCAAGGACAGCCTTCCATAATCCATGCCCCATTTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CAA 90 bp CCCCTGTGCTTCATGCCTTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCAGAACACAAGAAACCTTaGAGACAGTGTTGCAGTATT +
Preference number: 3 (lower is better)
Translates to: PLCFMPLPPGEPVQLKFPEHKKP*RQCCSI
Trigger: AATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTC...TGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAAGGCATGAAGCACAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CAA 90 bp GCCTGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGACTCAAGGATTATTTTaGGGGATTCACCATGCACAG +
Preference number: 3 (lower is better)
Translates to: ACYQPRVKRILEGLVACRTQGLF*GIHHAQ
Trigger: CTGTGCATGGTGAATCCCCAAAAATAATCCTTGAGT...CCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CAA 90 bp TGCCAACTCTATCTCAGCACTGATCCAGACCCCACCAGCCAAGCATTTGTGGGATGGCAGTTTTTATCCTaGAAGACCTCAGATATGCTA +
Preference number: 3 (lower is better)
Translates to: CQLYLSTDPDPTSQAFVGWQFLS*KTSDML
Trigger: TAGCATATCTGAGGTCTTCAAGGATAAAAACTGCCA...TCCCACAAATGCTTGGCTGGTGGGGTCTGGATCAGTGCTGAGATAGAGTTGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CAA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTTGTGATGGAAAAAGGTaGGAGGAAATGCTGGTGGTG +
Preference number: 3 (lower is better)
Translates to: CYQPRVKRILEGLVACRVCDGKR*EEMLVV
Trigger: CACCACCAGCATTTCCTCCAACCTTTTTCCATCACA...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CAA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTTCAGGTCGATTGGAATaGGTTTGGAATGAGTCCCTT +
Preference number: 3 (lower is better)
Translates to: CYQPRVKRILEGLVACRVSGRLE*VWNESL
Trigger: AAGGGACTCATTCCAAACCAATTCCAATCGACCTGA...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CAA 90 bp GCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTCAAACTTCAACTGAGCTTGGCATTTCACACTaGTACGTGGCAAGCAGTAGA +
Preference number: 3 (lower is better)
Translates to: ATNSFTSCKRDVAQTSTELGISH*YVASSR
Trigger: TCTACTGCTTGCCACGTACAAGTGTGAAATGCCAAG...CTCAGTTGAAGTTTGAGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR GCA 72 bp GATGAAAGGCCATCTTCACATGACAGTGAGCAGGCTTaGACAACTGACCAAAGACGGACACAGAAATGCAAA +
Preference number: 3 (lower is better)
Translates to: DERPSSHDSEQA*TTDQRRTQKCK
Trigger: TTTGCATTTCTGTGTCCGTCTTTGGTCAGTTGTGCAAGCCTGCTCACTGTCATGTGAAGATGGCCTTTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CCA 72 bp CTGCTACCAACTCATTCACTAGCTGTAAGAGGGATGTaGCTCAAACTTCAACTGAGAAGCATCAGCAATGGC +
Preference number: 3 (lower is better)
Translates to: LLPTHSLAVRGM*LKLQLRSISNG
Trigger: GCCATTGCTGATGCTTCTCAGTTGAAGTTTGAGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CCA 72 bp CCTAAGCAAAGTATACTCGGTGGAACCCTAGCTCTGTaGGGTGATCTGCAAAATAGAGTATCCTGGTCATGT +
Preference number: 3 (lower is better)
Translates to: PKQSILGGTLAL*GDLQNRVSWSC
Trigger: ACATGACCAGGATACTCTATTTTGCAGATCACCCCACAGAGCTAGGGTTCCACCGAGTATACTTTGCTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CAA 90 bp GCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTCAAACTTCAACTGAGGGACTTTCAGGTCGATaGGAATTGGTTTGGAATGAG +
Preference number: 3 (lower is better)
Translates to: ATNSFTSCKRDVAQTSTEGLSGR*ELVWNE
Trigger: CTCATTCCAAACCAATTCCAATCGACCTGAAAGTCC...CTCAGTTGAAGTTTGAGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CAA 90 bp ACCATTGCAAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACGGACTTTCAGGTCGATaGGAATTGGTTTGGAATGAG +
Preference number: 3 (lower is better)
Translates to: TIANPQVYESHLGISHLYGLSGR*ELVWNE
Trigger: CTCATTCCAAACCAATTCCAATCGACCTGAAAGTCC...GTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTTGCAATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CAA 90 bp ACCATTGCAAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACATGGACCTTCTGCTGTaGCTCATGAATAGTCCAAAC +
Preference number: 3 (lower is better)
Translates to: TIANPQVYESHLGISHLYMDLLL*LMNSPN
Trigger: GTTTGGACTATTCATGAGCAACAGCAGAAGGTCCAT...GTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTTGCAATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CAA 90 bp AGTGAACGATTCCAAACTATGAAACTGAAGAAGCACTCATCAAGAGATCATCTGTATGGAAGGCTGTCCTaGCTGCTCATGCATGGCAGT +
Preference number: 3 (lower is better)
Translates to: SERFQTMKLKKHSSRDHLYGRLS*LLMHGS
Trigger: ACTGCCATGCATGAGCAGCAAGGACAGCCTTCCATA...CAGATGATCTCTTGATGAGTGCTTCTTCAGTTTCATAGTTTGGAATCGTTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR TCA 72 bp CAAGGGACTTTCAGGTCGATTGGAATTGGTTTGGAATaGGTCCCTTGCAAAGATGACTCTAAGTGCAATAGC +
Preference number: 3 (lower is better)
Translates to: QGTFRSIGIGLE*VPCKDDSKCNS
Trigger: GCTATTGCACTTAGAGTCATCTTTGCAAGGGACTCATTCCAAACCAATTCCAATCGACCTGAAAGTCCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR GCA 72 bp ATTATCAGAAGTCCCATTTCTGAGGACAGTGTTCTCTaGCTGGAAATAAGGTCCAGATTCTCAATTCCAGGG +
Preference number: 3 (lower is better)
Translates to: IIRSPISEDSVL*LEIRSRFSIPG
Trigger: CCCTGGAATTGAGAATCTGGACCTTATTTCCAGGCAGAGAACACTGTCCTCAGAAATGGGACTTCTGATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CCA 72 bp CTAGCTCTGTGGGGTGATCTGCAAAATAGAGTATCCTaGTCATGTAAGTTCAGGAAATGCTACAGACTCAAG +
Preference number: 3 (lower is better)
Translates to: LALWGDLQNRVS*SCKFRKCYRLK
Trigger: CTTGAGTCTGTAGCATTTCCTGAACTTACATGACCAGGATACTCTATTTTGCAGATCACCCCACAGAGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CAA 90 bp TTAAGAGAGAGAAGCCAGATGAAAGGCCATCTTCACATGACAGTGAGCAGGCTTGAACACAAGAAACCTTaGAGACAGTGTTGCAGTATT +
Preference number: 3 (lower is better)
Translates to: LRERSQMKGHLHMTVSRLEHKKP*RQCCSI
Trigger: AATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTC...AAGCCTGCTCACTGTCATGTGAAGATGGCCTTTCATCTGGCTTCTCTCTCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR-3UTR CAA 90 bp ACGATTCCAAACTATGAAACTGAAGAAGCACTCATCAAGAGATCATCTGTTCCCCATGCACAGCACACATaGAAGGCTGAAAAGTCCTTG +
Preference number: 3 (lower is better)
Translates to: TIPNYETEEALIKRSSVPHAQHT*KAEKSL
Trigger: CAAGGACTTTTCAGCCTTCAATGTGTGCTGTGCATG...GGGAACAGATGATCTCTTGATGAGTGCTTCTTCAGTTTCATAGTTTGGAATCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR TCA 72 bp CATACACATGACAATGGCTGTTATCACATGACTCCATaGGAGGTTAGTAAGGAGAACATTCATGCCCCCAAA +
Preference number: 3 (lower is better)
Translates to: HTHDNGCYHMTP*EVSKENIHAPK
Trigger: TTTGGGGGCATGAATGTTCTCCTTACTAACCTCTCATGGAGTCATGTGATAACAGCCATTGTCATGTGTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR TCA 72 bp GTGGCATCCATACACATGACAATGGCTGTTATCACATaGCTCCATGAGAGGTTAGTAAGGAGAACATTCATG +
Preference number: 3 (lower is better)
Translates to: VASIHMTMAVIT*LHERLVRRTFM
Trigger: CATGAATGTTCTCCTTACTAACCTCTCATGGAGTCATGTGATAACAGCCATTGTCATGTGTATGGATGCCAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR TCA 72 bp GTGAGATGTTGCAGCTGCTGCCCACTGAGCTTGCTGTaGGCTTTACAATACAATCTTAATAGTTTCTGTGAA +
Preference number: 3 (lower is better)
Translates to: VRCCSCCPLSLL*ALQYNLNSFCE
Trigger: TTCACAGAAACTATTAAGATTGTATTGTAAAGCTCACAGCAAGCTCAGTGGGCAGCAGCTGCAACATCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR GCA 72 bp AATTCACCAGAACACAAGAAACCTTTGAGACAGTGTTaGAGTATTCACTTCTACAGACAAGGACGACCCATC +
Preference number: 3 (lower is better)
Translates to: NSPEHKKPLRQC*SIHFYRQGRPI
Trigger: GATGGGTCGTCCTTGTCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CCA 72 bp CTATGTCACATAAAGCTTTTTGAGGGCCAAGACTATTaGGTTTGTTCAACGCTCTATCTTCAGGGCCTAGTA +
Preference number: 3 (lower is better)
Translates to: LCHIKLFEGQDY*VCSTLYLQGLV
Trigger: TACTAGGCCCTGAAGATAGAGCGTTGAACAAACCCAATAGTCTTGGCCCTCAAAAAGCTTTATGTGACATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR GCA 72 bp TTAATCTCAGGAGTTCAAACCCTGGGCAGGTCTGAATaGTTAGCACTAAACCTAGGCATTTCTCTAATTCTA +
Preference number: 3 (lower is better)
Translates to: LISGVQTLGRSE*LALNLGISLIL
Trigger: TAGAATTAGAGAAATGCCTAGGTTTAGTGCTAAGCATTCAGACCTGCCCAGGGTTTGAACTCCTGAGATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547956.1
3UTR CCA 72 bp GAACCTGTGTTCTGTAGAATGCGTATTAGAAAATGTTaGACAACCTGTTTCATTATCAGAAGTCCCATTTCT +
Preference number: 3 (lower is better)
Translates to: EPVFCRMRIRKC*TTCFIIRSPIS
Trigger: AGAAATGGGACTTCTGATAATGAAACAGGTTGTCCAACATTTTCTAATACGCATTCTACAGAACACAGGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp GGAGTAGGGAGCCACCCTGGGCCCTATACCCCACTCACCCTCTCCTCTCTTCCTTGGCTTTGTCCTGGCTaGGGGGACCGGGGTGTCCGG +
Preference number: 4 (lower is better)
Translates to: GVGSHPGPYTPLTLSSLPWLCPG*GDRGVR
Trigger: CCGGACACCCCGGTCCCCGCAGCCAGGACAAAGCCA...AGGAAGAGAGGAGAGGGTGAGTGGGGTATAGGGCCCAGGGTGGCTCCCTACTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCACTGCCTGCTGCTCTCCTCTGGGGTGCGAGCGGTaGTGGTGGTGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: FATRRTSATEVSTACCSPLGCER*WWCRRR
Trigger: GCGGCGGCGGCACCACCATCACCGCTCGCACCCCAG...AGGAGAGCAGCAGGCAGTGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp GGAGTAGGGAGCCACCCTGGGCCCTATACCCCACTCACCCTCTCCTCTCTTCCTTTTGCCAGTGTTCGTTaGAAGGCTCCTCCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: GVGSHPGPYTPLTLSSLPFASVR*KAPPAG
Trigger: CCCAGCGGGAGGAGCCTTTCAACGAACACTGGCAAA...AGGAAGAGAGGAGAGGGTGAGTGGGGTATAGGGCCCAGGGTGGCTCCCTACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp AAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACGTGGCAAGCTGGGGTGCGAGCGGTaGTGGTGGTGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: KSPSVRVSPWHFTLVRGKLGCER*WWCRRR
Trigger: GCGGCGGCGGCACCACCATCACCGCTCGCACCCCAG...CTTGCCACGTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp GGAGTAGGGAGCCACCCTGGGCCCTATACCCCACTCACCCTCTCCTCTCTTCCTGGGTGTGTGGGTCGATaGGATAGGCCACAAACTCCT +
Preference number: 4 (lower is better)
Translates to: GVGSHPGPYTPLTLSSLPGCVGR*DRPQTP
Trigger: AGGAGTTTGTGGCCTATCTCATCGACCCACACACCC...AGGAAGAGAGGAGAGGGTGAGTGGGGTATAGGGCCCAGGGTGGCTCCCTACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TGCCAACTCTATCTCAGCACTGATCCAGACCCCACCAGCCAAGCATTTGTGGGAGATGCGTGGACCCGCTaGCTGCGCGCTCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: CQLYLSTDPDPTSQAFVGDAWTR*LRAPAP
Trigger: AGGAGCAGGAGCGCGCAGCCAGCGGGTCCACGCATC...TCCCACAAATGCTTGGCTGGTGGGGTCTGGATCAGTGCTGAGATAGAGTTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp GCCTGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGTGGCTTTGTCCTGGCTaGGGGGACCGGGGTGTCCGG +
Preference number: 4 (lower is better)
Translates to: ACYQPRVKRILEGLVACRWLCPG*GDRGVR
Trigger: CCGGACACCCCGGTCCCCGCAGCCAGGACAAAGCCA...CCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp CCATTGCTCGAACTTGAGACTGTTAATCTCAGGAGTTCAAACCCTGGGCAGGTCCTGCGCTGGCCGCTGTaGCTGTCCGACGGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: PLLELETVNLRSSNPGQVLRWPL*LSDGPS
Trigger: AGAGGGCCCGTCGGACAGCCACAGCGGCCAGCGCAG...GACCTGCCCAGGGTTTGAACTCCTGAGATTAACAGTCTCAAGTTCGAGCAATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547956.1
CDS-3UTR CCA 90 bp GGAGTAGGGAGCCACCCTGGGCCCTATACCCCACTCACCCTCTCCTCTCTTCCTGAGCTCCAGCTGGATTaGGTTGTAGAGTTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: GVGSHPGPYTPLTLSSLPELQLD*VVEFLQ
Trigger: CTGCAGGAACTCTACAACCCAATCCAGCTGGAGCTC...AGGAAGAGAGGAGAGGGTGAGTGGGGTATAGGGCCCAGGGTGGCTCCCTACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TGCCAACTCTATCTCAGCACTGATCCAGACCCCACCAGCCAAGCATTTGTGGGAGCAGGGCCTCCTGGGTaGCGTTCTTCCGCTGGCGTT +
Preference number: 4 (lower is better)
Translates to: CQLYLSTDPDPTSQAFVGAGPPG*RSSAGV
Trigger: AACGCCAGCGGAAGAACGCCACCCAGGAGGCCCTGC...TCCCACAAATGCTTGGCTGGTGGGGTCTGGATCAGTGCTGAGATAGAGTTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp CCCCTGTGCTTCATGCCTTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCAAGGGTGCAGCCCACCTaGTGCACAGGGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PLCFMPLPPGEPVQLKFPRVQPT*CTGRRR
Trigger: CCTCCTCCTCCCTGTGCACCAGGTGGGCTGCACCCT...TGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAAGGCATGAAGCACAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp AACTTGAGACTGTTAATCTCAGGAGTTCAAACCCTGGGCAGGTCTGAATGCTTACTGGGGTGCGAGCGGTaGTGGTGGTGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: NLRLLISGVQTLGRSECLLGCER*WWCRRR
Trigger: GCGGCGGCGGCACCACCATCACCGCTCGCACCCCAG...TAAGCATTCAGACCTGCCCAGGGTTTGAACTCCTGAGATTAACAGTCTCAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547956.1
CDS-3UTR GCA 90 bp AAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACGTGGCAAGCTGGCTGCGCGCTCCTaGTCCTCCTCCTCGCCGCTC +
Preference number: 4 (lower is better)
Translates to: KSPSVRVSPWHFTLVRGKLAARS*SSSSPL
Trigger: GAGCGGCGAGGAGGAGGAGCAGGAGCGCGCAGCCAG...CTTGCCACGTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp ATTCACTTCTACAGACAAGGACGACCCATCCTATTTCCCCTGCAAAGACAGCTGCGTGGACCCGCTGGCTaGGCGCTCCTGCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: IHFYRQGRPILFPLQRQLRGPAG*ALLLLL
Trigger: GAGGAGGAGCAGGAGCGCGCAGCCAGCGGGTCCACG...CAGCTGTCTTTGCAGGGGAAATAGGATGGGTCGTCCTTGTCTGTAGAAGTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCACTGCCTGCTGCTCTCCTCTGGAAGTGCTGAGATaGGTGGACCCGCTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: FATRRTSATEVSTACCSPLEVLR*VDPLAA
Trigger: CGCAGCCAGCGGGTCCACGCATCTCAGCACTTCCAG...AGGAGAGCAGCAGGCAGTGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp GGAGTAGGGAGCCACCCTGGGCCCTATACCCCACTCACCCTCTCCTCTCTTCCTATGGAAGGCTGTCCTTaGTGCTCATGCATGGCAGTT +
Preference number: 4 (lower is better)
Translates to: GVGSHPGPYTPLTLSSLPMEGCP*CSCMAV
Trigger: AACTGCCATGCATGAGCAGCAAGGACAGCCTTCCAT...AGGAAGAGAGGAGAGGGTGAGTGGGGTATAGGGCCCAGGGTGGCTCCCTACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TGCCAACTCTATCTCAGCACTGATCCAGACCCCACCAGCCAAGCATTTGTGGGATGGCCGGGATCTCCATaGGGTCGCTGTACTTCCCCC +
Preference number: 4 (lower is better)
Translates to: CQLYLSTDPDPTSQAFVGWPGSP*GRCTSP
Trigger: GGGGGAAGTACAGCGACCCCATGGAGATCCCGGCCA...TCCCACAAATGCTTGGCTGGTGGGGTCTGGATCAGTGCTGAGATAGAGTTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp GGAGTAGGGAGCCACCCTGGGCCCTATACCCCACTCACCCTCTCCTCTCTTCCTGGCTTCCAGAGGAAATaGGGCATGGATTATGGAAGG +
Preference number: 4 (lower is better)
Translates to: GVGSHPGPYTPLTLSSLPGFQRK*GMDYGR
Trigger: CCTTCCATAATCCATGCCCCATTTCCTCTGGAAGCC...AGGAAGAGAGGAGAGGGTGAGTGGGGTATAGGGCCCAGGGTGGCTCCCTACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp GGAGTAGGGAGCCACCCTGGGCCCTATACCCCACTCACCCTCTCCTCTCTTCCTGGCAAGGAAGGGATTTaGTCACTGGGATTGCACAGA +
Preference number: 4 (lower is better)
Translates to: GVGSHPGPYTPLTLSSLPGKEGI*SLGLHR
Trigger: TCTGTGCAATCCCAGTGACCAAATCCCTTCCTTGCC...AGGAAGAGAGGAGAGGGTGAGTGGGGTATAGGGCCCAGGGTGGCTCCCTACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp ACCATTGCAAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACGGCGCGGGGCAGAGCTaGGCAAGGCTCAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: TIANPQVYESHLGISHLYGAGQS*ARLRGR
Trigger: CCTCCCTCTGAGCCTTGCTCAGCTCTGCCCCGCGCC...GTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTTGCAATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp ACCATTGCAAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACCTGCGCTGGCCGCTGTaGCTGTCCGACGGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: TIANPQVYESHLGISHLYLRWPL*LSDGPS
Trigger: AGAGGGCCCGTCGGACAGCCACAGCGGCCAGCGCAG...GTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTTGCAATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTGCCCGGGCAGGGGTGTaGAAGGTGCCGGAGTTGGTC +
Preference number: 4 (lower is better)
Translates to: CYQPRVKRILEGLVACRVARAGV*KVPELV
Trigger: GACCAACTCCGGCACCTTCCACACCCCTGCCCGGGC...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp AAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACGTGGCAAGGCCCGGGCAGGGGTGTaGAAGGTGCCGGAGTTGGTC +
Preference number: 4 (lower is better)
Translates to: KSPSVRVSPWHFTLVRGKARAGV*KVPELV
Trigger: GACCAACTCCGGCACCTTCCACACCCCTGCCCGGGC...CTTGCCACGTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp CCCCTGTGCTTCATGCCTTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCAGGCTTGTGGCGCTGTTaGCTCGGCACGTGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: PLCFMPLPPGEPVQLKFPGLWRC*LGTCLS
Trigger: TGACAGACACGTGCCGAGCCAACAGCGCCACAAGCC...TGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAAGGCATGAAGCACAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TGCCAACTCTATCTCAGCACTGATCCAGACCCCACCAGCCAAGCATTTGTGGGAAGTAGGGAGCCACCCTaGGCCCTATACCCCACTCAC +
Preference number: 4 (lower is better)
Translates to: CQLYLSTDPDPTSQAFVGSREPP*ALYPTH
Trigger: GTGAGTGGGGTATAGGGCCCAGGGTGGCTCCCTACT...TCCCACAAATGCTTGGCTGGTGGGGTCTGGATCAGTGCTGAGATAGAGTTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TGCCTGGAGAATCCATTCTGGGGCTTAAAGGCAGACATTACCCATCAGTTGGAGAGGGTGCAGCCCACCTaGTGCACAGGGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: CLENPFWGLKADITHQLERVQPT*CTGRRR
Trigger: CCTCCTCCTCCCTGTGCACCAGGTGGGCTGCACCCT...CTCCAACTGATGGGTAATGTCTGCCTTTAAGCCCCAGAATGGATTCTCCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp GTGTTGGGGTGGCAGTTTTTATCCTTGAAGACCTCAGATATGCTAAGTCAACCTGGCGCGGGGCAGAGCTaGGCAAGGCTCAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: VLGWQFLSLKTSDMLSQPGAGQS*ARLRGR
Trigger: CCTCCCTCTGAGCCTTGCTCAGCTCTGCCCCGCGCC...AGGTTGACTTAGCATATCTGAGGTCTTCAAGGATAAAAACTGCCACCCCAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCACTGCCTGCTGCTCTCCTGTGGCATCCACATCCTaGATAGGCAGGAGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: FATRRTSATEVSTACCSPVASTS*IGRRVQ
Trigger: CTGCACCCTCCTGCCTATTCAGGATGTGGATGCCAC...AGGAGAGCAGCAGGCAGTGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp CCATTGCTCGAACTTGAGACTGTTAATCTCAGGAGTTCAAACCCTGGGCAGGTCCTGGAAGTGCTGAGATaGGTGGACCCGCTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: PLLELETVNLRSSNPGQVLEVLR*VDPLAA
Trigger: CGCAGCCAGCGGGTCCACGCATCTCAGCACTTCCAG...GACCTGCCCAGGGTTTGAACTCCTGAGATTAACAGTCTCAAGTTCGAGCAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547956.1
CDS-3UTR GCA 90 bp TTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCACTGCCTGCTGCTCTCCTTCCCGCCGCATCTGGTaGAGGACAGCAGTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: FATRRTSATEVSTACCSPSRRIW*RTAVFE
Trigger: CTCAAACACTGCTGTCCTGCACCAGATGCGGCGGGA...AGGAGAGCAGCAGGCAGTGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TGCCTGGAGAATCCATTCTGGGGCTTAAAGGCAGACATTACCCATCAGTTGGAGGTTGGCGGAGACGTGTaGCTCGTTGGCCGGGATCTC +
Preference number: 4 (lower is better)
Translates to: CLENPFWGLKADITHQLEVGGDV*LVGRDL
Trigger: GAGATCCCGGCCAACGAGGCACACGTCTCCGCCAAC...CTCCAACTGATGGGTAATGTCTGCCTTTAAGCCCCAGAATGGATTCTCCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TTGAGACTGTTAATCTCAGGAGTTCAAACCCTGGGCAGGTCTGAATGCTTAGCAGATGCGTGGACCCGCTaGCTGCGCGCTCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LRLLISGVQTLGRSECLADAWTR*LRAPAP
Trigger: AGGAGCAGGAGCGCGCAGCCAGCGGGTCCACGCATC...TGCTAAGCATTCAGACCTGCCCAGGGTTTGAACTCCTGAGATTAACAGTCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547956.1
CDS-3UTR CCA 90 bp GCCTGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGTTCATGGCTTTGTCCTaGCTGCGGGGACCGGGGTGT +
Preference number: 4 (lower is better)
Translates to: ACYQPRVKRILEGLVACRFMALS*LRGPGC
Trigger: ACACCCCGGTCCCCGCAGCCAGGACAAAGCCATGAA...CCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TGCCAACTCTATCTCAGCACTGATCCAGACCCCACCAGCCAAGCATTTGTGGGAAGGATCCCAAGCAAGTaGCCAGCACCATCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: CQLYLSTDPDPTSQAFVGRIPSK*PAPSGR
Trigger: TCTGCCGGATGGTGCTGGCCACTTGCTTGGGATCCT...TCCCACAAATGCTTGGCTGGTGGGGTCTGGATCAGTGCTGAGATAGAGTTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp CCCCTGTGCTTCATGCCTTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCATCAGGGTCTTCAGGTTaGCGGAGACGTGTGCCTCGT +
Preference number: 4 (lower is better)
Translates to: PLCFMPLPPGEPVQLKFPSGSSG*RRRVPR
Trigger: ACGAGGCACACGTCTCCGCCAACCTGAAGACCCTGA...TGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAAGGCATGAAGCACAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp AAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACGTGGCAAGTTGCGCAGGGCCTCCTaGGTGGCGTTCTTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: KSPSVRVSPWHFTLVRGKLRRAS*VAFFRW
Trigger: CCAGCGGAAGAACGCCACCCAGGAGGCCCTGCGCAA...CTTGCCACGTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp GCCTGTAGGGTTCTAACTGGTTGTGATGGAAAAAGGTTGGAGGAAATGCTGGTGTTGCGCAGGGCCTCCTaGGTGGCGTTCTTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: ACRVLTGCDGKRLEEMLVLRRAS*VAFFRW
Trigger: CCAGCGGAAGAACGCCACCCAGGAGGCCCTGCGCAA...CACCAGCATTTCCTCCAACCTTTTTCCATCACAACCAGTTAGAACCCTACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp GCCTGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGCTCCCGCTGGGTGTGTaGGTCGATGAGATAGGCCAC +
Preference number: 4 (lower is better)
Translates to: ACYQPRVKRILEGLVACRLPLGV*VDEIGH
Trigger: GTGGCCTATCTCATCGACCCACACACCCAGCGGGAG...CCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp GGAGTAGGGAGCCACCCTGGGCCCTATACCCCACTCACCCTCTCCTCTCTTCCTCATAAGAAAGTAGTATaGGCAGCTCCTTCTGGACCT +
Preference number: 4 (lower is better)
Translates to: GVGSHPGPYTPLTLSSLPHKKVV*AAPSGP
Trigger: AGGTCCAGAAGGAGCTGCCCATACTACTTTCTTATG...AGGAAGAGAGGAGAGGGTGAGTGGGGTATAGGGCCCAGGGTGGCTCCCTACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGGAGGACTGGCTAGCAGGGATGGCAGAGTaGGTAGACGGTTTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: LCVCVCVCVCVCVGEDWLAGMAE*VDGLPV
Trigger: CACTGGCAAACCGTCTACTCACTCTGCCATCCCTGC...TAGCCAGTCCTCCCCTACACACACACACACACACACACACACACACACACACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp CTGCTAGATTTTTCAGAGATGCTACATAGAAAAAGGGTGACGGAGAAAGCAACCCTGGCTGCGCGCTCCTaGTCCTCCTCCTCGCCGCTC +
Preference number: 4 (lower is better)
Translates to: LLDFSEMLHRKRVTEKATLAARS*SSSSPL
Trigger: GAGCGGCGAGGAGGAGGAGCAGGAGCGCGCAGCCAG...GGTTGCTTTCTCCGTCACCCTTTTTCTATGTAGCATCTCTGAAAAATCTAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000547956.1
CDS-3UTR GCA 90 bp CTGCTAGATTTTTCAGAGATGCTACATAGAAAAAGGGTGACGGAGAAAGCAACCCGTGGACCCGCTGGCTaGGCGCTCCTGCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LLDFSEMLHRKRVTEKATRGPAG*ALLLLL
Trigger: GAGGAGGAGCAGGAGCGCGCAGCCAGCGGGTCCACG...GGTTGCTTTCTCCGTCACCCTTTTTCTATGTAGCATCTCTGAAAAATCTAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000547956.1
CDS-3UTR GCA 90 bp TTATATACAGTAGCTGCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTCGTGGACCCGCTGGCTaGGCGCTCCTGCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LYTVAATNSFTSCKRDVARGPAG*ALLLLL
Trigger: GAGGAGGAGCAGGAGCGCGCAGCCAGCGGGTCCACG...AGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGCAGCTACTGTATATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp GCCTGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGCAGGGGTGTGGAAGGTaGCGGAGTTGGTCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: ACYQPRVKRILEGLVACRQGCGR*RSWSGS
Trigger: ACTTCCAGACCAACTCCGGCACCTTCCACACCCCTG...CCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp ATTCACTTCTACAGACAAGGACGACCCATCCTATTTCCCCTGCAAAGACAGCTGGTTGGCGGAGACGTGTaGCTCGTTGGCCGGGATCTC +
Preference number: 4 (lower is better)
Translates to: IHFYRQGRPILFPLQRQLVGGDV*LVGRDL
Trigger: GAGATCCCGGCCAACGAGGCACACGTCTCCGCCAAC...CAGCTGTCTTTGCAGGGGAAATAGGATGGGTCGTCCTTGTCTGTAGAAGTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCACTGCCTGCTGCTCTCCTGTGAGATGTTGCAGCTaGTGCCCACTGAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: FATRRTSATEVSTACCSPVRCCS*CPLSLL
Trigger: CAGCAAGCTCAGTGGGCAGCAGCTGCAACATCTCAC...AGGAGAGCAGCAGGCAGTGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp CCCCTGTGCTTCATGCCTTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCAGGGGTCTGGAGGAGCTaGGGGAATCATCTAGAGCTT +
Preference number: 4 (lower is better)
Translates to: PLCFMPLPPGEPVQLKFPGVWRS*GNHLEL
Trigger: AAGCTCTAGATGATTCCCGCAGCTCCTCCAGACCCC...TGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAAGGCATGAAGCACAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TGTGGTGCTAGGCTGAATGGAGATGACAGTAGGAGGCACTTGAGGAGTGTTCCCGTTTCCACTGCCTGCTaGTCTCCTGTGGCATCCACA +
Preference number: 4 (lower is better)
Translates to: CGARLNGDDSRRHLRSVPVSTAC*SPVAST
Trigger: TGTGGATGCCACAGGAGAGCAGCAGGCAGTGGAAAC...GGGAACACTCCTCAAGTGCCTCCTACTGTCATCTCCATTCAGCCTAGCACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TGTGGTGCTAGGCTGAATGGAGATGACAGTAGGAGGCACTTGAGGAGTGTTCCCGAAGTTTCCACTGCCTaGTGCTCTCCTGTGGCATCC +
Preference number: 4 (lower is better)
Translates to: CGARLNGDDSRRHLRSVPEVSTA*CSPVAS
Trigger: GGATGCCACAGGAGAGCAGCAGGCAGTGGAAACTTC...GGGAACACTCCTCAAGTGCCTCCTACTGTCATCTCCATTCAGCCTAGCACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp CCCCTGTGCTTCATGCCTTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCAGACCCCTGTGCTTCATaGCTTTGCCACCAGGAGAAC +
Preference number: 4 (lower is better)
Translates to: PLCFMPLPPGEPVQLKFPDPCAS*LCHQEN
Trigger: GTTCTCCTGGTGGCAAAGGCATGAAGCACAGGGGTC...TGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAAGGCATGAAGCACAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TGCCTGGAGAATCCATTCTGGGGCTTAAAGGCAGACATTACCCATCAGTTGGAGTTCATGGCTTTGTCCTaGCTGCGGGGACCGGGGTGT +
Preference number: 4 (lower is better)
Translates to: CLENPFWGLKADITHQLEFMALS*LRGPGC
Trigger: ACACCCCGGTCCCCGCAGCCAGGACAAAGCCATGAA...CTCCAACTGATGGGTAATGTCTGCCTTTAAGCCCCAGAATGGATTCTCCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp GCCTGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGTCAGGGTCTTCAGGTTaGCGGAGACGTGTGCCTCGT +
Preference number: 4 (lower is better)
Translates to: ACYQPRVKRILEGLVACRSGSSG*RRRVPR
Trigger: ACGAGGCACACGTCTCCGCCAACCTGAAGACCCTGA...CCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TGCCTGGAGAATCCATTCTGGGGCTTAAAGGCAGACATTACCCATCAGTTGGAGAGTAGGGAGCCACCCTaGGCCCTATACCCCACTCAC +
Preference number: 4 (lower is better)
Translates to: CLENPFWGLKADITHQLESREPP*ALYPTH
Trigger: GTGAGTGGGGTATAGGGCCCAGGGTGGCTCCCTACT...CTCCAACTGATGGGTAATGTCTGCCTTTAAGCCCCAGAATGGATTCTCCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp AAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACGTGGCAAGCAGGGAGGCGGGGTCTaGAGGAGCTGCGGGAATCAT +
Preference number: 4 (lower is better)
Translates to: KSPSVRVSPWHFTLVRGKQGGGV*RSCGNH
Trigger: ATGATTCCCGCAGCTCCTCCAGACCCCGCCTCCCTG...CTTGCCACGTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CAA 72 bp TCATCAAGAGATCATCTGTTCCCACTGAGCATCCTTTaGAGCCTGAGGAGTAGGGAGCCACCCTGGGCCCTA +
Preference number: 4 (lower is better)
Translates to: SSRDHLFPLSIL*SLRSREPPWAL
Trigger: TAGGGCCCAGGGTGGCTCCCTACTCCTCAGGCTCAAAAGGATGCTCAGTGGGAACAGATGATCTCTTGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CAA 72 bp ATCTCAGCACTGATCCAGACCCCACCAGCCAAGCATTaGTGGGACCCGCACACTTTGCTCTGGAGCTTTCTA +
Preference number: 4 (lower is better)
Translates to: ISALIQTPPAKH*WDPHTLLWSFL
Trigger: TAGAAAGCTCCAGAGCAAAGTGTGCGGGTCCCACAAATGCTTGGCTGGTGGGGTCTGGATCAGTGCTGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp GGAGTTCAAACCCTGGGCAGGTCTGAATGCTTAGCACTAAACCTAGGCATTTCTTTGGTCTGGAAGTGCTaGGATGCGTGGACCCGCTGG +
Preference number: 4 (lower is better)
Translates to: GVQTLGRSECLALNLGISLVWKC*DAWTRW
Trigger: CCAGCGGGTCCACGCATCTCAGCACTTCCAGACCAA...AGAAATGCCTAGGTTTAGTGCTAAGCATTCAGACCTGCCCAGGGTTTGAACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547956.1
CDS-3UTR TCA 90 bp CTAGATTTTTCAGAGATGCTACATAGAAAAAGGGTGACGGAGAAAGCAACCACTGGCGCGGGGCAGAGCTaGGCAAGGCTCAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LDFSEMLHRKRVTEKATTGAGQS*ARLRGR
Trigger: CCTCCCTCTGAGCCTTGCTCAGCTCTGCCCCGCGCC...AGTGGTTGCTTTCTCCGTCACCCTTTTTCTATGTAGCATCTCTGAAAAATCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000547956.1
CDS-3UTR TCA 90 bp GCCTGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGCAGGACAGCAGTGTTTaGGAGCTCCAGCTGGATTGG +
Preference number: 4 (lower is better)
Translates to: ACYQPRVKRILEGLVACRQDSSV*ELQLDW
Trigger: CCAATCCAGCTGGAGCTCTCAAACACTGCTGTCCTG...CCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp GCCTGTAGGGTTCTAACTGGTTGTGATGGAAAAAGGTTGGAGGAAATGCTGGTGCGGTCAGGACCATCATaGGCCGCTTCCAGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: ACRVLTGCDGKRLEEMLVRSGPS*AASSWC
Trigger: GCACCAACTGGAAGCGGCTCATGATGGTCCTGACCG...CACCAGCATTTCCTCCAACCTTTTTCCATCACAACCAGTTAGAACCCTACAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCACTGCCTGCTGCTCTCCTACAGTAGGAGGCACTTaGGGAGTGTTCCCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: FATRRTSATEVSTACCSPTVGGT*GVFPFP
Trigger: AGGAAAGGGGAACACTCCTCAAGTGCCTCCTACTGT...AGGAGAGCAGCAGGCAGTGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp GCCTGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGACTCTATCTCAGCACTaGTCCAGACCCCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: ACYQPRVKRILEGLVACRTLSQH*SRPHQP
Trigger: TGGCTGGTGGGGTCTGGATCAGTGCTGAGATAGAGT...CCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCACTGCCTGCTGCTCTCCTCCACTTCACCTTCACTaGAACTGGCACCGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: FATRRTSATEVSTACCSPPLHLH*NWHRQF
Trigger: AAACTGGCGGTGCCAGTTGCAGTGAAGGTGAAGTGG...AGGAGAGCAGCAGGCAGTGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp GCCTGTAGGGTTCTAACTGGTTGTGATGGAAAAAGGTTGGAGGAAATGCTGGTGTCCCCGGTGAGATGTTaGAGCTGCTGCCCACTGAGC +
Preference number: 4 (lower is better)
Translates to: ACRVLTGCDGKRLEEMLVSPVRC*SCCPLS
Trigger: GCTCAGTGGGCAGCAGCTGCAACATCTCACCGGGGA...CACCAGCATTTCCTCCAACCTTTTTCCATCACAACCAGTTAGAACCCTACAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGGAGGACTGGCTAGACCCCTGTGCTTCATaGCTTTGCCACCAGGAGAAC +
Preference number: 4 (lower is better)
Translates to: LCVCVCVCVCVCVGEDWLDPCAS*LCHQEN
Trigger: GTTCTCCTGGTGGCAAAGGCATGAAGCACAGGGGTC...TAGCCAGTCCTCCCCTACACACACACACACACACACACACACACACACACACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TCACCAGAACACAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGACTGCGCTGGCCGCTGTaGCTGTCCGACGGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: SPEHKKPLRQCCSIHFYRLRWPL*LSDGPS
Trigger: AGAGGGCCCGTCGGACAGCCACAGCGGCCAGCGCAG...TCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp CTGCTAGATTTTTCAGAGATGCTACATAGAAAAAGGGTGACGGAGAAAGCAACCGCCCGGGCAGGGGTGTaGAAGGTGCCGGAGTTGGTC +
Preference number: 4 (lower is better)
Translates to: LLDFSEMLHRKRVTEKATARAGV*KVPELV
Trigger: GACCAACTCCGGCACCTTCCACACCCCTGCCCGGGC...GGTTGCTTTCTCCGTCACCCTTTTTCTATGTAGCATCTCTGAAAAATCTAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000547956.1
CDS-3UTR CCA 90 bp CCCCTGTGCTTCATGCCTTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCAGAGCTCCAGCTGGATTaGGTTGTAGAGTTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PLCFMPLPPGEPVQLKFPELQLD*VVEFLQ
Trigger: CTGCAGGAACTCTACAACCCAATCCAGCTGGAGCTC...TGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAAGGCATGAAGCACAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp ACCATTGCAAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACCACGTGTCTGTCACCTaGTCCCGCCGCATCTGGTGC +
Preference number: 4 (lower is better)
Translates to: TIANPQVYESHLGISHLYHVSVT*SRRIWC
Trigger: GCACCAGATGCGGCGGGACCAGGTGACAGACACGTG...GTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTTGCAATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp AAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACGTGGCAAGGGCTTGTGGCGCTGTTaGCTCGGCACGTGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: KSPSVRVSPWHFTLVRGKGLWRC*LGTCLS
Trigger: TGACAGACACGTGCCGAGCCAACAGCGCCACAAGCC...CTTGCCACGTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp GCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTCAAACTTCAACTGAGTCCGCTTACGGCTTGTaGCGCTGTTGGCTCGGCACG +
Preference number: 4 (lower is better)
Translates to: ATNSFTSCKRDVAQTSTESAYGL*RCWLGT
Trigger: CGTGCCGAGCCAACAGCGCCACAAGCCGTAAGCGGA...CTCAGTTGAAGTTTGAGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp ATTCACTTCTACAGACAAGGACGACCCATCCTATTTCCCCTGCAAAGACAGCTGAGTGCTTCAGGTCGTTaGGGGTCAGCACCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: IHFYRQGRPILFPLQRQLSASGR*GSAPSA
Trigger: AGCGGAGGGTGCTGACCCCCAACGACCTGAAGCACT...CAGCTGTCTTTGCAGGGGAAATAGGATGGGTCGTCCTTGTCTGTAGAAGTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp AAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACGTGGCAAGAGACGTGTGCCTCGTTaGCCGGGATCTCCATGGGGT +
Preference number: 4 (lower is better)
Translates to: KSPSVRVSPWHFTLVRGKRRVPR*PGSPWG
Trigger: ACCCCATGGAGATCCCGGCCAACGAGGCACACGTCT...CTTGCCACGTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TGTGGTGCTAGGCTGAATGGAGATGACAGTAGGAGGCACTTGAGGAGTGTTCCCTGTGTAGGGGAGGACTaGCTAGGAAAGCAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: CGARLNGDDSRRHLRSVPCVGED*LGKQAE
Trigger: CTCTGCTTGCTTTCCTAGCCAGTCCTCCCCTACACA...GGGAACACTCCTCAAGTGCCTCCTACTGTCATCTCCATTCAGCCTAGCACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TGCCTGGAGAATCCATTCTGGGGCTTAAAGGCAGACATTACCCATCAGTTGGAGGGTTGGAGGAAATGCTaGTGGTGGGAACTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: CLENPFWGLKADITHQLEGWRKC*WWELGG
Trigger: TCCCCCGAGTTCCCACCACCAGCATTTCCTCCAACC...CTCCAACTGATGGGTAATGTCTGCCTTTAAGCCCCAGAATGGATTCTCCAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CAA 72 bp ACCCCACCAGCCAAGCATTTGTGGGACCCGCACACTTaGCTCTGGAGCTTTCTAGTAGCCTGGATTAATCGA +
Preference number: 4 (lower is better)
Translates to: TPPAKHLWDPHT*LWSFLVAWINR
Trigger: TCGATTAATCCAGGCTACTAGAAAGCTCCAGAGCAAAGTGTGCGGGTCCCACAAATGCTTGGCTGGTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CAA 72 bp GCCTGTAGGGTTCTAACTGGTTGTGATGGAAAAAGGTaGGAGGAAATGCTGGTGGTGGGAACTCGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: ACRVLTGCDGKR*EEMLVVGTRGS
Trigger: ACTCCCCCGAGTTCCCACCACCAGCATTTCCTCCAACCTTTTTCCATCACAACCAGTTAGAACCCTACAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp GCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTCAAACTTCAACTGAGCGGTCAGGACCATCATaGGCCGCTTCCAGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: ATNSFTSCKRDVAQTSTERSGPS*AASSWC
Trigger: GCACCAACTGGAAGCGGCTCATGATGGTCCTGACCG...CTCAGTTGAAGTTTGAGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp GCCTGTAGGGTTCTAACTGGTTGTGATGGAAAAAGGTTGGAGGAAATGCTGGTGTTTGCCAGTGTTCGTTaGAAGGCTCCTCCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: ACRVLTGCDGKRLEEMLVFASVR*KAPPAG
Trigger: CCCAGCGGGAGGAGCCTTTCAACGAACACTGGCAAA...CACCAGCATTTCCTCCAACCTTTTTCCATCACAACCAGTTAGAACCCTACAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp CCCCTGTGCTTCATGCCTTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCAGATGTGGTGCTAGGCTaGATGGAGATGACAGTAGGA +
Preference number: 4 (lower is better)
Translates to: PLCFMPLPPGEPVQLKFPDVVLG*MEMTVG
Trigger: TCCTACTGTCATCTCCATTCAGCCTAGCACCACATC...TGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAAGGCATGAAGCACAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTAGCCTCTGGAGGACGTaGGAGGGTGTGCATGTGTGT +
Preference number: 4 (lower is better)
Translates to: CYQPRVKRILEGLVACRVSLWRT*EGVHVC
Trigger: ACACACATGCACACCCTCTCACGTCCTCCAGAGGCT...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp GCCTGTAGGGTTCTAACTGGTTGTGATGGAAAAAGGTTGGAGGAAATGCTGGTGAGCCTCTGGAGGACGTaGGAGGGTGTGCATGTGTGT +
Preference number: 4 (lower is better)
Translates to: ACRVLTGCDGKRLEEMLVSLWRT*EGVHVC
Trigger: ACACACATGCACACCCTCTCACGTCCTCCAGAGGCT...CACCAGCATTTCCTCCAACCTTTTTCCATCACAACCAGTTAGAACCCTACAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp CTAGATTTTTCAGAGATGCTACATAGAAAAAGGGTGACGGAGAAAGCAACCACTTGGCTTTGTCCTGGCTaGGGGGACCGGGGTGTCCGG +
Preference number: 4 (lower is better)
Translates to: LDFSEMLHRKRVTEKATTWLCPG*GDRGVR
Trigger: CCGGACACCCCGGTCCCCGCAGCCAGGACAAAGCCA...AGTGGTTGCTTTCTCCGTCACCCTTTTTCTATGTAGCATCTCTGAAAAATCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000547956.1
CDS-3UTR GCA 90 bp TGTGGTGCTAGGCTGAATGGAGATGACAGTAGGAGGCACTTGAGGAGTGTTCCCCACTCTTCCACACTGTaGCTGGAGAATCCATTCTGG +
Preference number: 4 (lower is better)
Translates to: CGARLNGDDSRRHLRSVPHSSTL*LENPFW
Trigger: CCAGAATGGATTCTCCAGGCACAGTGTGGAAGAGTG...GGGAACACTCCTCAAGTGCCTCCTACTGTCATCTCCATTCAGCCTAGCACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp GCCTGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGAAGGCTGTCCTTGCTaGTCATGCATGGCAGTTACC +
Preference number: 4 (lower is better)
Translates to: ACYQPRVKRILEGLVACREGCPC*SCMAVT
Trigger: GGTAACTGCCATGCATGAGCAGCAAGGACAGCCTTC...CCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp CCATTGCTCGAACTTGAGACTGTTAATCTCAGGAGTTCAAACCCTGGGCAGGTCGGAAGGTGCCGGAGTTaGTCTGGAAGTGCTGAGATG +
Preference number: 4 (lower is better)
Translates to: PLLELETVNLRSSNPGQVGRCRS*SGSAEM
Trigger: CATCTCAGCACTTCCAGACCAACTCCGGCACCTTCC...GACCTGCCCAGGGTTTGAACTCCTGAGATTAACAGTCTCAAGTTCGAGCAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547956.1
CDS-3UTR CCA 90 bp TTAATCTCAGGAGTTCAAACCCTGGGCAGGTCTGAATGCTTAGCACTAAACCTAGCAGCGCTGGCTTCATaGCTTTGTCCTGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: LISGVQTLGRSECLALNLAALAS*LCPGCG
Trigger: CCCGCAGCCAGGACAAAGCCATGAAGCCAGCGCTGC...TAGGTTTAGTGCTAAGCATTCAGACCTGCCCAGGGTTTGAACTCCTGAGATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547956.1
CDS-3UTR CCA 90 bp GCCTGTAGGGTTCTAACTGGTTGTGATGGAAAAAGGTTGGAGGAAATGCTGGTGTGGTCCCGCCGCATCTaGTGCAGGACAGCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: ACRVLTGCDGKRLEEMLVWSRRI*CRTAVF
Trigger: AAACACTGCTGTCCTGCACCAGATGCGGCGGGACCA...CACCAGCATTTCCTCCAACCTTTTTCCATCACAACCAGTTAGAACCCTACAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp CAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGACAAGGACGACCCACGTGTCTGTCACCTaGTCCCGCCGCATCTGGTGC +
Preference number: 4 (lower is better)
Translates to: QETFETVLQYSLLQTRTTHVSVT*SRRIWC
Trigger: GCACCAGATGCGGCGGGACCAGGTGACAGACACGTG...GGTCGTCCTTGTCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp CAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGACAAGGACGACCTCCGCTTACGGCTTGTaGCGCTGTTGGCTCGGCACG +
Preference number: 4 (lower is better)
Translates to: QETFETVLQYSLLQTRTTSAYGL*RCWLGT
Trigger: CGTGCCGAGCCAACAGCGCCACAAGCCGTAAGCGGA...GGTCGTCCTTGTCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp ATTCACTTCTACAGACAAGGACGACCCATCCTATTTCCCCTGCAAAGACAGCTGAAAGGCTCCTCCCGCTaGGTGTGTGGGTCGATGAGA +
Preference number: 4 (lower is better)
Translates to: IHFYRQGRPILFPLQRQLKGSSR*VCGSMR
Trigger: TCTCATCGACCCACACACCCAGCGGGAGGAGCCTTT...CAGCTGTCTTTGCAGGGGAAATAGGATGGGTCGTCCTTGTCTGTAGAAGTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TGTGGTGCTAGGCTGAATGGAGATGACAGTAGGAGGCACTTGAGGAGTGTTCCCATGGGGCATGGATTATaGAAGGCTGTCCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: CGARLNGDDSRRHLRSVPMGHGL*KAVLAA
Trigger: AGCAGCAAGGACAGCCTTCCATAATCCATGCCCCAT...GGGAACACTCCTCAAGTGCCTCCTACTGTCATCTCCATTCAGCCTAGCACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TGTGGTGCTAGGCTGAATGGAGATGACAGTAGGAGGCACTTGAGGAGTGTTCCCGGCTTCCAGAGGAAATaGGGCATGGATTATGGAAGG +
Preference number: 4 (lower is better)
Translates to: CGARLNGDDSRRHLRSVPGFQRK*GMDYGR
Trigger: CCTTCCATAATCCATGCCCCATTTCCTCTGGAAGCC...GGGAACACTCCTCAAGTGCCTCCTACTGTCATCTCCATTCAGCCTAGCACCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp AAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACGTGGCAAGTGGAGGAAATGCTGGTaGTGGGAACTCGGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: KSPSVRVSPWHFTLVRGKWRKCW*WELGGV
Trigger: CACTCCCCCGAGTTCCCACCACCAGCATTTCCTCCA...CTTGCCACGTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTTGGAGGAAATGCTGGTaGTGGGAACTCGGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: CYQPRVKRILEGLVACRVWRKCW*WELGGV
Trigger: CACTCCCCCGAGTTCCCACCACCAGCATTTCCTCCA...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTGGTTGGAGGAAATGCTaGTGGTGGGAACTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: CYQPRVKRILEGLVACRVGWRKC*WWELGG
Trigger: TCCCCCGAGTTCCCACCACCAGCATTTCCTCCAACC...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TGCCTGGAGAATCCATTCTGGGGCTTAAAGGCAGACATTACCCATCAGTTGGAGTGTTGTACTTCTGGGTaGACTTGTTGCGGTAGGCGG +
Preference number: 4 (lower is better)
Translates to: CLENPFWGLKADITHQLECCTSG*TCCGRR
Trigger: CCGCCTACCGCAACAAGTTCACCCAGAAGTACAACA...CTCCAACTGATGGGTAATGTCTGCCTTTAAGCCCCAGAATGGATTCTCCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp GCCTGTAGGGTTCTAACTGGTTGTGATGGAAAAAGGTTGGAGGAAATGCTGGTGTGTGGTCAGTCCTGCTaGCATAGAGGTGGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: ACRVLTGCDGKRLEEMLVCGQSC*HRGGQG
Trigger: TCCTTGCCCACCTCTATGTCAGCAGGACTGACCACA...CACCAGCATTTCCTCCAACCTTTTTCCATCACAACCAGTTAGAACCCTACAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp ATTCACTTCTACAGACAAGGACGACCCATCCTATTTCCCCTGCAAAGACAGCTGGTAGCTGCCCACTCCTaGCAGCTGCAGGACGTAATT +
Preference number: 4 (lower is better)
Translates to: IHFYRQGRPILFPLQRQLVAAHS*QLQDVI
Trigger: AATTACGTCCTGCAGCTGGCAGGAGTGGGCAGCTAC...CAGCTGTCTTTGCAGGGGAAATAGGATGGGTCGTCCTTGTCTGTAGAAGTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TTAAGAGAGAGAAGCCAGATGAAAGGCCATCTTCACATGACAGTGAGCAGGCTTGGAACTTCAGGTAGCTaGCCACTCCTGCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LRERSQMKGHLHMTVSRLGTSGS*PLLPAA
Trigger: TGCAGCTGGCAGGAGTGGGCAGCTACCTGAAGTTCC...AAGCCTGCTCACTGTCATGTGAAGATGGCCTTTCATCTGGCTTCTCTCTCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TGTGGTGCTAGGCTGAATGGAGATGACAGTAGGAGGCACTTGAGGAGTGTTCCCTGTCCTTGCTGCTCATaGATGGCAGTTACCAAGATG +
Preference number: 4 (lower is better)
Translates to: CGARLNGDDSRRHLRSVPCPCCS*MAVTKM
Trigger: CATCTTGGTAACTGCCATGCATGAGCAGCAAGGACA...GGGAACACTCCTCAAGTGCCTCCTACTGTCATCTCCATTCAGCCTAGCACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp ATTCACTTCTACAGACAAGGACGACCCATCCTATTTCCCCTGCAAAGACAGCTGGTGAGATGTTGCAGCTaGTGCCCACTGAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: IHFYRQGRPILFPLQRQLVRCCS*CPLSLL
Trigger: CAGCAAGCTCAGTGGGCAGCAGCTGCAACATCTCAC...CAGCTGTCTTTGCAGGGGAAATAGGATGGGTCGTCCTTGTCTGTAGAAGTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp CAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGACAAGGACGACCTCCCCGGTGAGATGTTaGAGCTGCTGCCCACTGAGC +
Preference number: 4 (lower is better)
Translates to: QETFETVLQYSLLQTRTTSPVRC*SCCPLS
Trigger: GCTCAGTGGGCAGCAGCTGCAACATCTCACCGGGGA...GGTCGTCCTTGTCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TGCCAACTCTATCTCAGCACTGATCCAGACCCCACCAGCCAAGCATTTGTGGGAGAGGACAGTGTTCTCTaGCTGGAAATAAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: CQLYLSTDPDPTSQAFVGEDSVL*LEIRSR
Trigger: TCTGGACCTTATTTCCAGGCAGAGAACACTGTCCTC...TCCCACAAATGCTTGGCTGGTGGGGTCTGGATCAGTGCTGAGATAGAGTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTGGGAGATGGGACGCCTaGCTGTACTTTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: CYQPRVKRILEGLVACRVGRWDA*LYFSPA
Trigger: AGCTGGAGAAAAGTACAGGCAGGCGTCCCATCTCCC...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCACTGCCTGCTGCTCTCCTAAGCAGGAATGTCCTTaGAAATACTGCCCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: FATRRTSATEVSTACCSPKQECP*KYCPGC
Trigger: ACAGCCAGGGCAGTATTTGCAAGGACATTCCTGCTT...AGGAGAGCAGCAGGCAGTGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp ATTCACTTCTACAGACAAGGACGACCCATCCTATTTCCCCTGCAAAGACAGCTGGGGGTCTGGAGGAGCTaGGGGAATCATCTAGAGCTT +
Preference number: 4 (lower is better)
Translates to: IHFYRQGRPILFPLQRQLGVWRS*GNHLEL
Trigger: AAGCTCTAGATGATTCCCGCAGCTCCTCCAGACCCC...CAGCTGTCTTTGCAGGGGAAATAGGATGGGTCGTCCTTGTCTGTAGAAGTGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TGCCAACTCTATCTCAGCACTGATCCAGACCCCACCAGCCAAGCATTTGTGGGAATTAATCGACCCCTGTaGTTCATGCCTTTGCCACCA +
Preference number: 4 (lower is better)
Translates to: CQLYLSTDPDPTSQAFVGINRPL*FMPLPP
Trigger: TGGTGGCAAAGGCATGAAGCACAGGGGTCGATTAAT...TCCCACAAATGCTTGGCTGGTGGGGTCTGGATCAGTGCTGAGATAGAGTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TGTGGTGCTAGGCTGAATGGAGATGACAGTAGGAGGCACTTGAGGAGTGTTCCCTGCCTCTGCTTCTTCTaGCAACTCTATCTCAGCACT +
Preference number: 4 (lower is better)
Translates to: CGARLNGDDSRRHLRSVPCLCFF*QLYLST
Trigger: AGTGCTGAGATAGAGTTGGCAGAAGAAGCAGAGGCA...GGGAACACTCCTCAAGTGCCTCCTACTGTCATCTCCATTCAGCCTAGCACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TGTGGTGCTAGGCTGAATGGAGATGACAGTAGGAGGCACTTGAGGAGTGTTCCCCAAGCAGAGTGCCTCTaGTTCTTCTGCCAACTCTAT +
Preference number: 4 (lower is better)
Translates to: CGARLNGDDSRRHLRSVPQAECL*FFCQLY
Trigger: ATAGAGTTGGCAGAAGAAGCAGAGGCACTCTGCTTG...GGGAACACTCCTCAAGTGCCTCCTACTGTCATCTCCATTCAGCCTAGCACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TTAATCTCAGGAGTTCAAACCCTGGGCAGGTCTGAATGCTTAGCACTAAACCTATTCATGGCTTTGTCCTaGCTGCGGGGACCGGGGTGT +
Preference number: 4 (lower is better)
Translates to: LISGVQTLGRSECLALNLFMALS*LRGPGC
Trigger: ACACCCCGGTCCCCGCAGCCAGGACAAAGCCATGAA...TAGGTTTAGTGCTAAGCATTCAGACCTGCCCAGGGTTTGAACTCCTGAGATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547956.1
CDS-3UTR CCA 90 bp TTATATACAGTAGCTGCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTGCAGCGCTGGCTTCATaGCTTTGTCCTGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: LYTVAATNSFTSCKRDVAAALAS*LCPGCG
Trigger: CCCGCAGCCAGGACAAAGCCATGAAGCCAGCGCTGC...AGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGCAGCTACTGTATATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp GTGTTGGGGTGGCAGTTTTTATCCTTGAAGACCTCAGATATGCTAAGTCAACCTAGTGCTTCAGGTCGTTaGGGGTCAGCACCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: VLGWQFLSLKTSDMLSQPSASGR*GSAPSA
Trigger: AGCGGAGGGTGCTGACCCCCAACGACCTGAAGCACT...AGGTTGACTTAGCATATCTGAGGTCTTCAAGGATAAAAACTGCCACCCCAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp ACGATTCCAAACTATGAAACTGAAGAAGCACTCATCAAGAGATCATCTGTTCCCGCAGGGCCTCCTGGGTaGCGTTCTTCCGCTGGCGTT +
Preference number: 4 (lower is better)
Translates to: TIPNYETEEALIKRSSVPAGPPG*RSSAGV
Trigger: AACGCCAGCGGAAGAACGCCACCCAGGAGGCCCTGC...GGGAACAGATGATCTCTTGATGAGTGCTTCTTCAGTTTCATAGTTTGGAATCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp GCCTGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGATGGGGCATGGATTATaGAAGGCTGTCCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: ACYQPRVKRILEGLVACRMGHGL*KAVLAA
Trigger: AGCAGCAAGGACAGCCTTCCATAATCCATGCCCCAT...CCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TTAAGAGAGAGAAGCCAGATGAAAGGCCATCTTCACATGACAGTGAGCAGGCTTCCTTTGAGAAGTGGCTaGGAGATGGGACGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: LRERSQMKGHLHMTVSRLPLRSG*EMGRLP
Trigger: AGGCAGGCGTCCCATCTCCCAGCCACTTCTCAAAGG...AAGCCTGCTCACTGTCATGTGAAGATGGCCTTTCATCTGGCTTCTCTCTCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp GCCTGTAGGGTTCTAACTGGTTGTGATGGAAAAAGGTTGGAGGAAATGCTGGTGCCAGCCAAGCATTTGTaGGACCCGCACACTTTGCTC +
Preference number: 4 (lower is better)
Translates to: ACRVLTGCDGKRLEEMLVPAKHL*DPHTLL
Trigger: GAGCAAAGTGTGCGGGTCCCACAAATGCTTGGCTGG...CACCAGCATTTCCTCCAACCTTTTTCCATCACAACCAGTTAGAACCCTACAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp AAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACGTGGCAAGAGGAAATGCTGGTGGTaGGAACTCGGGGGAGTGATG +
Preference number: 4 (lower is better)
Translates to: KSPSVRVSPWHFTLVRGKRKCWW*ELGGVM
Trigger: CATCACTCCCCCGAGTTCCCACCACCAGCATTTCCT...CTTGCCACGTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTAGGAAATGCTGGTGGTaGGAACTCGGGGGAGTGATG +
Preference number: 4 (lower is better)
Translates to: CYQPRVKRILEGLVACRVRKCWW*ELGGVM
Trigger: CATCACTCCCCCGAGTTCCCACCACCAGCATTTCCT...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CAA 72 bp GTAGCCTGGATTAATCGACCCCTGTGCTTCATGCCTTaGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: VAWINRPLCFMP*PPGEPVQLKFP
Trigger: TGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAAGGCATGAAGCACAGGGGTCGATTAATCCAGGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CAA 72 bp TGGTCACTGGGATTGCACAGAATGGCGCAGCTGAGATaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: WSLGLHRMAQLR*CVCVCVCVCVC
Trigger: ACACACACACACACACACACACACACACACACACAATCTCAGCTGCGCCATTCTGTGCAATCCCAGTGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CAA 72 bp ATAGAGGTGGGCAAGGAAGGGATTTGGTCACTGGGATaGCACAGAATGGCGCAGCTGAGATTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: IEVGKEGIWSLG*HRMAQLRLCVC
Trigger: ACACACACACAATCTCAGCTGCGCCATTCTGTGCAATCCCAGTGACCAAATCCCTTCCTTGCCCACCTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp ACCATTGCAAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACCAGGACAGCAGTGTTTaGGAGCTCCAGCTGGATTGG +
Preference number: 4 (lower is better)
Translates to: TIANPQVYESHLGISHLYQDSSV*ELQLDW
Trigger: CCAATCCAGCTGGAGCTCTCAAACACTGCTGTCCTG...GTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTTGCAATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp GTGTTGGGGTGGCAGTTTTTATCCTTGAAGACCTCAGATATGCTAAGTCAACCTGCAGGGATGGCAGAGTaGGTAGACGGTTTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: VLGWQFLSLKTSDMLSQPAGMAE*VDGLPV
Trigger: CACTGGCAAACCGTCTACTCACTCTGCCATCCCTGC...AGGTTGACTTAGCATATCTGAGGTCTTCAAGGATAAAAACTGCCACCCCAACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TGCCTGGAGAATCCATTCTGGGGCTTAAAGGCAGACATTACCCATCAGTTGGAGCTGCGTTTGGTGCTCTaGGCTGATGTTCTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: CLENPFWGLKADITHQLELRLVL*ADVLEE
Trigger: TTCTTCCAGAACATCAGCTCAGAGCACCAAACGCAG...CTCCAACTGATGGGTAATGTCTGCCTTTAAGCCCCAGAATGGATTCTCCAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGGAGGACTGGCTAATTCATGCCCCCAAATaGGCTGTAGCAAGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: LCVCVCVCVCVCVGEDWLIHAPK*AVASKA
Trigger: TGCTTTGCTTGCTACAGCTCATTTGGGGGCATGAAT...TAGCCAGTCCTCCCCTACACACACACACACACACACACACACACACACACACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp GCCTGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGTTTTCTGTTGGTCAGTaGGCTTGGGATCACTCACGA +
Preference number: 4 (lower is better)
Translates to: ACYQPRVKRILEGLVACRFSVGQ*AWDHSR
Trigger: TCGTGAGTGATCCCAAGCTCACTGACCAACAGAAAA...CCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp ATTCACTTCTACAGACAAGGACGACCCATCCTATTTCCCCTGCAAAGACAGCTGACAGTAGGAGGCACTTaGGGAGTGTTCCCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: IHFYRQGRPILFPLQRQLTVGGT*GVFPFP
Trigger: AGGAAAGGGGAACACTCCTCAAGTGCCTCCTACTGT...CAGCTGTCTTTGCAGGGGAAATAGGATGGGTCGTCCTTGTCTGTAGAAGTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp ATTCACTTCTACAGACAAGGACGACCCATCCTATTTCCCCTGCAAAGACAGCTGGCAGGCTTGCACAACTaGCCAAAGACGGACACAGAA +
Preference number: 4 (lower is better)
Translates to: IHFYRQGRPILFPLQRQLAGLHN*PKTDTE
Trigger: TTCTGTGTCCGTCTTTGGTCAGTTGTGCAAGCCTGC...CAGCTGTCTTTGCAGGGGAAATAGGATGGGTCGTCCTTGTCTGTAGAAGTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp GTGTTGGGGTGGCAGTTTTTATCCTTGAAGACCTCAGATATGCTAAGTCAACCTGAGGAACGTCCCCTCTaGGATACCACAGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: VLGWQFLSLKTSDMLSQPEERPL*DTTGQQ
Trigger: CTGCTGACCTGTGGTATCTCAGAGGGGACGTTCCTC...AGGTTGACTTAGCATATCTGAGGTCTTCAAGGATAAAAACTGCCACCCCAACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp CAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGACAAGGACGACCGTGGCATCCACATCCTaGATAGGCAGGAGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: QETFETVLQYSLLQTRTTVASTS*IGRRVQ
Trigger: CTGCACCCTCCTGCCTATTCAGGATGTGGATGCCAC...GGTCGTCCTTGTCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp GCCTGTAGGGTTCTAACTGGTTGTGATGGAAAAAGGTTGGAGGAAATGCTGGTGGAGAACCAGTGCAACTaGAGTTTCCACTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ACRVLTGCDGKRLEEMLVENQCN*SFHCLL
Trigger: CAGCAGGCAGTGGAAACTTCAGTTGCACTGGTTCTC...CACCAGCATTTCCTCCAACCTTTTTCCATCACAACCAGTTAGAACCCTACAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TTAAGAGAGAGAAGCCAGATGAAAGGCCATCTTCACATGACAGTGAGCAGGCTTACTCTATCTCAGCACTaGTCCAGACCCCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: LRERSQMKGHLHMTVSRLTLSQH*SRPHQP
Trigger: TGGCTGGTGGGGTCTGGATCAGTGCTGAGATAGAGT...AAGCCTGCTCACTGTCATGTGAAGATGGCCTTTCATCTGGCTTCTCTCTCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp GTGTTGGGGTGGCAGTTTTTATCCTTGAAGACCTCAGATATGCTAAGTCAACCTCAGGGGTGTGGAAGGTaGCGGAGTTGGTCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: VLGWQFLSLKTSDMLSQPQGCGR*RSWSGS
Trigger: ACTTCCAGACCAACTCCGGCACCTTCCACACCCCTG...AGGTTGACTTAGCATATCTGAGGTCTTCAAGGATAAAAACTGCCACCCCAACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TTAATCTCAGGAGTTCAAACCCTGGGCAGGTCTGAATGCTTAGCACTAAACCTACAGGGGTGTGGAAGGTaGCGGAGTTGGTCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: LISGVQTLGRSECLALNLQGCGR*RSWSGS
Trigger: ACTTCCAGACCAACTCCGGCACCTTCCACACCCCTG...TAGGTTTAGTGCTAAGCATTCAGACCTGCCCAGGGTTTGAACTCCTGAGATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547956.1
CDS-3UTR GCA 90 bp TGCCAACTCTATCTCAGCACTGATCCAGACCCCACCAGCCAAGCATTTGTGGGAAGTTCTCGTAGACTTTaGATAGGTGGGGAACTTCAG +
Preference number: 4 (lower is better)
Translates to: CQLYLSTDPDPTSQAFVGSSRRL*IGGELQ
Trigger: CTGAAGTTCCCCACCTATGCAAAGTCTACGAGAACT...TCCCACAAATGCTTGGCTGGTGGGGTCTGGATCAGTGCTGAGATAGAGTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGGAGGACTGGCTATGTCCTTGCTGCTCATaGATGGCAGTTACCAAGATG +
Preference number: 4 (lower is better)
Translates to: LCVCVCVCVCVCVGEDWLCPCCS*MAVTKM
Trigger: CATCTTGGTAACTGCCATGCATGAGCAGCAAGGACA...TAGCCAGTCCTCCCCTACACACACACACACACACACACACACACACACACACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTGAAGGCTGTCCTTGCTaGTCATGCATGGCAGTTACC +
Preference number: 4 (lower is better)
Translates to: CYQPRVKRILEGLVACRVEGCPC*SCMAVT
Trigger: GGTAACTGCCATGCATGAGCAGCAAGGACAGCCTTC...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp ACCATTGCAAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACGGGAGATGGGACGCCTaGCTGTACTTTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: TIANPQVYESHLGISHLYGRWDA*LYFSPA
Trigger: AGCTGGAGAAAAGTACAGGCAGGCGTCCCATCTCCC...GTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTTGCAATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TCACCAGAACACAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGAGCAGCGCTGGCTTCATaGCTTTGTCCTGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: SPEHKKPLRQCCSIHFYRAALAS*LCPGCG
Trigger: CCCGCAGCCAGGACAAAGCCATGAAGCCAGCGCTGC...TCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TTAAGAGAGAGAAGCCAGATGAAAGGCCATCTTCACATGACAGTGAGCAGGCTTCACTTCCAGCAGCGCTaGCTTCATGGCTTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: LRERSQMKGHLHMTVSRLHFQQR*LHGFVL
Trigger: CAGGACAAAGCCATGAAGCCAGCGCTGCTGGAAGTG...AAGCCTGCTCACTGTCATGTGAAGATGGCCTTTCATCTGGCTTCTCTCTCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TTAATCTCAGGAGTTCAAACCCTGGGCAGGTCTGAATGCTTAGCACTAAACCTAAGGATCCCAAGCAAGTaGCCAGCACCATCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: LISGVQTLGRSECLALNLRIPSK*PAPSGR
Trigger: TCTGCCGGATGGTGCTGGCCACTTGCTTGGGATCCT...TAGGTTTAGTGCTAAGCATTCAGACCTGCCCAGGGTTTGAACTCCTGAGATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547956.1
CDS-3UTR CCA 90 bp TTATATACAGTAGCTGCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTAGACGTGTGCCTCGTTaGCCGGGATCTCCATGGGGT +
Preference number: 4 (lower is better)
Translates to: LYTVAATNSFTSCKRDVARRVPR*PGSPWG
Trigger: ACCCCATGGAGATCCCGGCCAACGAGGCACACGTCT...AGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGCAGCTACTGTATATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp ATTCACTTCTACAGACAAGGACGACCCATCCTATTTCCCCTGCAAAGACAGCTGGTGGCGTTCTTCCGCTaGCGTTTGATGATCTTGGTG +
Preference number: 4 (lower is better)
Translates to: IHFYRQGRPILFPLQRQLVAFFR*RLMILV
Trigger: CACCAAGATCATCAAACGCCAGCGGAAGAACGCCAC...CAGCTGTCTTTGCAGGGGAAATAGGATGGGTCGTCCTTGTCTGTAGAAGTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TGTGGTGCTAGGCTGAATGGAGATGACAGTAGGAGGCACTTGAGGAGTGTTCCCCACCTTCACTGCAACTaGCACCGCCAGTTTAAAATT +
Preference number: 4 (lower is better)
Translates to: CGARLNGDDSRRHLRSVPHLHCN*HRQFKI
Trigger: AATTTTAAACTGGCGGTGCCAGTTGCAGTGAAGGTG...GGGAACACTCCTCAAGTGCCTCCTACTGTCATCTCCATTCAGCCTAGCACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCACTGCCTGCTGCTCTCCTCTGGAGAATCCATTCTaGGGCTTAAAGGCAGACATT +
Preference number: 4 (lower is better)
Translates to: FATRRTSATEVSTACCSPLENPF*GLKADI
Trigger: AATGTCTGCCTTTAAGCCCCAGAATGGATTCTCCAG...AGGAGAGCAGCAGGCAGTGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TGCCTGGAGAATCCATTCTGGGGCTTAAAGGCAGACATTACCCATCAGTTGGAGGACAACACTTCTACATaGGGATGTGGTGCTAGGCTG +
Preference number: 4 (lower is better)
Translates to: CLENPFWGLKADITHQLEDNTST*GCGARL
Trigger: CAGCCTAGCACCACATCCCCATGTAGAAGTGTTGTC...CTCCAACTGATGGGTAATGTCTGCCTTTAAGCCCCAGAATGGATTCTCCAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCACTGCCTGCTGCTCTCCTGTACGAGTCTCACCTTaGCATTTCACACTTGTACGT +
Preference number: 4 (lower is better)
Translates to: FATRRTSATEVSTACCSPVRVSP*HFTLVR
Trigger: ACGTACAAGTGTGAAATGCCAAGGTGAGACTCGTAC...AGGAGAGCAGCAGGCAGTGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp GCCTGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGAGAGGAAATGGGGCATaGATTATGGAAGGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: ACYQPRVKRILEGLVACRRGNGA*IMEGCP
Trigger: AGGACAGCCTTCCATAATCCATGCCCCATTTCCTCT...CCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TTAAGAGAGAGAAGCCAGATGAAAGGCCATCTTCACATGACAGTGAGCAGGCTTAGCACCTTTGAGAAGTaGCTGGGAGATGGGACGCCT +
Preference number: 4 (lower is better)
Translates to: LRERSQMKGHLHMTVSRLSTFEK*LGDGTP
Trigger: AGGCGTCCCATCTCCCAGCCACTTCTCAAAGGTGCT...AAGCCTGCTCACTGTCATGTGAAGATGGCCTTTCATCTGGCTTCTCTCTCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp GTGTTGGGGTGGCAGTTTTTATCCTTGAAGACCTCAGATATGCTAAGTCAACCTGCACGTAGCAGTAGATaGGCTCGTGGTCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: VLGWQFLSLKTSDMLSQPARSSR*ARGPHP
Trigger: TGGATGAGGACCACGAGCTCATCTACTGCTACGTGC...AGGTTGACTTAGCATATCTGAGGTCTTCAAGGATAAAAACTGCCACCCCAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TTAAGAGAGAGAAGCCAGATGAAAGGCCATCTTCACATGACAGTGAGCAGGCTTTGTTGTACTTCTGGGTaGACTTGTTGCGGTAGGCGG +
Preference number: 4 (lower is better)
Translates to: LRERSQMKGHLHMTVSRLCCTSG*TCCGRR
Trigger: CCGCCTACCGCAACAAGTTCACCCAGAAGTACAACA...AAGCCTGCTCACTGTCATGTGAAGATGGCCTTTCATCTGGCTTCTCTCTCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp CAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGACAAGGACGACCGGGTGTGTGGGTCGATaGGATAGGCCACAAACTCCT +
Preference number: 4 (lower is better)
Translates to: QETFETVLQYSLLQTRTTGCVGR*DRPQTP
Trigger: AGGAGTTTGTGGCCTATCTCATCGACCCACACACCC...GGTCGTCCTTGTCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGGAGGACTGGCTAGGTTCTAACTGGTTGTaGTGGAAAAAGGTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LCVCVCVCVCVCVGEDWLGSNWL*WKKVGG
Trigger: TCCTCCAACCTTTTTCCATCACAACCAGTTAGAACC...TAGCCAGTCCTCCCCTACACACACACACACACACACACACACACACACACACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TGTGGTGCTAGGCTGAATGGAGATGACAGTAGGAGGCACTTGAGGAGTGTTCCCCACTCCACAAAGATGTaGCATTACATGTCCATATGC +
Preference number: 4 (lower is better)
Translates to: CGARLNGDDSRRHLRSVPHSTKM*HYMSIC
Trigger: GCATATGGACATGTAATGTCACATCTTTGTGGAGTG...GGGAACACTCCTCAAGTGCCTCCTACTGTCATCTCCATTCAGCCTAGCACCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TGCCAACTCTATCTCAGCACTGATCCAGACCCCACCAGCCAAGCATTTGTGGGACTGGAGGAAGGTTCATaGACATTTTCACGCTTTTGT +
Preference number: 4 (lower is better)
Translates to: CQLYLSTDPDPTSQAFVGLEEGS*TFSRFC
Trigger: ACAAAAGCGTGAAAATGTTCATGAACCTTCCTCCAG...TCCCACAAATGCTTGGCTGGTGGGGTCTGGATCAGTGCTGAGATAGAGTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp GTGTTGGGGTGGCAGTTTTTATCCTTGAAGACCTCAGATATGCTAAGTCAACCTTCATCCACCACCAAGTaGTTCAGGTCGTTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: VLGWQFLSLKTSDMLSQPSSTTK*FRSLGV
Trigger: GACCCCCAACGACCTGAAGCACTTGGTGGTGGATGA...AGGTTGACTTAGCATATCTGAGGTCTTCAAGGATAAAAACTGCCACCCCAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp AAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACGTGGCAAGTACAGCTGCGTTTGGTaGTCTGAGCTGATGTTCTGG +
Preference number: 4 (lower is better)
Translates to: KSPSVRVSPWHFTLVRGKYSCVW*SELMFW
Trigger: CCAGAACATCAGCTCAGAGCACCAAACGCAGCTGTA...CTTGCCACGTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp AAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACGTGGCAAGCACTCTTCCACACTGTaGCTGGAGAATCCATTCTGG +
Preference number: 4 (lower is better)
Translates to: KSPSVRVSPWHFTLVRGKHSSTL*LENPFW
Trigger: CCAGAATGGATTCTCCAGGCACAGTGTGGAAGAGTG...CTTGCCACGTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp AGTGAACGATTCCAAACTATGAAACTGAAGAAGCACTCATCAAGAGATCATCTGTGGCCGGGATCTCCATaGGGTCGCTGTACTTCCCCC +
Preference number: 4 (lower is better)
Translates to: SERFQTMKLKKHSSRDHLWPGSP*GRCTSP
Trigger: GGGGGAAGTACAGCGACCCCATGGAGATCCCGGCCA...CAGATGATCTCTTGATGAGTGCTTCTTCAGTTTCATAGTTTGGAATCGTTCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTGCGGTGGTTGATTTCTaGGATGCTGTACTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: CYQPRVKRILEGLVACRVAVVDF*DAVLVQ
Trigger: CTGAACCAGTACAGCATCCCAGAAATCAACCACCGC...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTGTGCCGTACCGCTTGTaGAAGGAGATGTTGTACTTC +
Preference number: 4 (lower is better)
Translates to: CYQPRVKRILEGLVACRVVPYRL*KEMLYF
Trigger: GAAGTACAACATCTCCTTCCACAAGCGGTACGGCAC...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TTATATACAGTAGCTGCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTAAAGGCTCCTCCCGCTaGGTGTGTGGGTCGATGAGA +
Preference number: 4 (lower is better)
Translates to: LYTVAATNSFTSCKRDVAKGSSR*VCGSMR
Trigger: TCTCATCGACCCACACACCCAGCGGGAGGAGCCTTT...AGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGCAGCTACTGTATATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TGCCAACTCTATCTCAGCACTGATCCAGACCCCACCAGCCAAGCATTTGTGGGATTTCACACTTGTACGTaGCAAGCAGTAGAAGACAAC +
Preference number: 4 (lower is better)
Translates to: CQLYLSTDPDPTSQAFVGFHTCT*QAVEDN
Trigger: GTTGTCTTCTACTGCTTGCCACGTACAAGTGTGAAA...TCCCACAAATGCTTGGCTGGTGGGGTCTGGATCAGTGCTGAGATAGAGTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TGCCTGGAGAATCCATTCTGGGGCTTAAAGGCAGACATTACCCATCAGTTGGAGAGAGGAAATGGGGCATaGATTATGGAAGGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: CLENPFWGLKADITHQLERGNGA*IMEGCP
Trigger: AGGACAGCCTTCCATAATCCATGCCCCATTTCCTCT...CTCCAACTGATGGGTAATGTCTGCCTTTAAGCCCCAGAATGGATTCTCCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TGCCTGGAGAATCCATTCTGGGGCTTAAAGGCAGACATTACCCATCAGTTGGAGAGCTTTCTAGTAGCCTaGATTAATCGACCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: CLENPFWGLKADITHQLESFLVA*INRPLC
Trigger: GCACAGGGGTCGATTAATCCAGGCTACTAGAAAGCT...CTCCAACTGATGGGTAATGTCTGCCTTTAAGCCCCAGAATGGATTCTCCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTAAGGGATTTGGTCACTaGGATTGCACAGAATGGCGC +
Preference number: 4 (lower is better)
Translates to: CYQPRVKRILEGLVACRVKGFGH*DCTEWR
Trigger: GCGCCATTCTGTGCAATCCCAGTGACCAAATCCCTT...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CAA 72 bp CCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTaGTACGTGGCAAGCAGTAGAAGACAACACTTCTAC +
Preference number: 4 (lower is better)
Translates to: PQVYESHLGISH*YVASSRRQHFY
Trigger: GTAGAAGTGTTGTCTTCTACTGCTTGCCACGTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp GCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTCAAACTTCAACTGAGCAAACTCCTCGAATTTaGCATCGTCCCCTTTGCGCA +
Preference number: 4 (lower is better)
Translates to: ATNSFTSCKRDVAQTSTEQTPRI*HRPLCA
Trigger: TGCGCAAAGGGGACGATGTCAAATTCGAGGAGTTTG...CTCAGTTGAAGTTTGAGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp ACCATTGCAAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACCTGCGTTTGGTGCTCTaGGCTGATGTTCTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: TIANPQVYESHLGISHLYLRLVL*ADVLEE
Trigger: TTCTTCCAGAACATCAGCTCAGAGCACCAAACGCAG...GTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTTGCAATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp GCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTCAAACTTCAACTGAGGATGTGGTGCTAGGCTaGATGGAGATGACAGTAGGA +
Preference number: 4 (lower is better)
Translates to: ATNSFTSCKRDVAQTSTEDVVLG*MEMTVG
Trigger: TCCTACTGTCATCTCCATTCAGCCTAGCACCACATC...CTCAGTTGAAGTTTGAGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TGCCAACTCTATCTCAGCACTGATCCAGACCCCACCAGCCAAGCATTTGTGGGAAAATGCAAAGCAACGTaGATTTCCATTGAAAACCCC +
Preference number: 4 (lower is better)
Translates to: CQLYLSTDPDPTSQAFVGKCKAT*ISIENP
Trigger: GGGGTTTTCAATGGAAATTCACGTTGCTTTGCATTT...TCCCACAAATGCTTGGCTGGTGGGGTCTGGATCAGTGCTGAGATAGAGTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TCACCAGAACACAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGATCCCGCCGCATCTGGTaGAGGACAGCAGTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: SPEHKKPLRQCCSIHFYRSRRIW*RTAVFE
Trigger: CTCAAACACTGCTGTCCTGCACCAGATGCGGCGGGA...TCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp CAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGACAAGGACGACCCCACTTCACCTTCACTaGAACTGGCACCGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: QETFETVLQYSLLQTRTTPLHLH*NWHRQF
Trigger: AAACTGGCGGTGCCAGTTGCAGTGAAGGTGAAGTGG...GGTCGTCCTTGTCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TGCCAACTCTATCTCAGCACTGATCCAGACCCCACCAGCCAAGCATTTGTGGGAAATTGTCGAGCTGGATaGTCTATGTCACATAAAGCT +
Preference number: 4 (lower is better)
Translates to: CQLYLSTDPDPTSQAFVGNCRAG*SMSHKA
Trigger: AGCTTTATGTGACATAGAGCATCCAGCTCGACAATT...TCCCACAAATGCTTGGCTGGTGGGGTCTGGATCAGTGCTGAGATAGAGTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp CAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGACAAGGACGACCCAAGGGTATAGTTGCTaGGCCCTTCACAAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: QETFETVLQYSLLQTRTTQGYSC*ALHKGE
Trigger: CTCCCCTTTGTGAAGGGCGCAGCAACTATACCCTTG...GGTCGTCCTTGTCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTGAGGACAGTGTTCTCTaGCTGGAAATAAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: CYQPRVKRILEGLVACRVEDSVL*LEIRSR
Trigger: TCTGGACCTTATTTCCAGGCAGAGAACACTGTCCTC...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCACTGCCTGCTGCTCTCCTAGGCTGAAAAGTCCTTaGAGAAAGGAAACTGACTTA +
Preference number: 4 (lower is better)
Translates to: FATRRTSATEVSTACCSPRLKSP*RKETDL
Trigger: TAAGTCAGTTTCCTTTCTGCAAGGACTTTTCAGCCT...AGGAGAGCAGCAGGCAGTGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTTTTGGGGATTCACCATaGACAGCACACATTGAAGGC +
Preference number: 4 (lower is better)
Translates to: CYQPRVKRILEGLVACRVFGDSP*TAHIEG
Trigger: GCCTTCAATGTGTGCTGTGCATGGTGAATCCCCAAA...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TTATATACAGTAGCTGCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTGGAAGGTGCCGGAGTTaGTCTGGAAGTGCTGAGATG +
Preference number: 4 (lower is better)
Translates to: LYTVAATNSFTSCKRDVAGRCRS*SGSAEM
Trigger: CATCTCAGCACTTCCAGACCAACTCCGGCACCTTCC...AGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGCAGCTACTGTATATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp CTGCTAGATTTTTCAGAGATGCTACATAGAAAAAGGGTGACGGAGAAAGCAACCCACTTCCAGCAGCGCTaGCTTCATGGCTTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: LLDFSEMLHRKRVTEKATHFQQR*LHGFVL
Trigger: CAGGACAAAGCCATGAAGCCAGCGCTGCTGGAAGTG...GGTTGCTTTCTCCGTCACCCTTTTTCTATGTAGCATCTCTGAAAAATCTAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000547956.1
CDS-3UTR CCA 90 bp TTAAGAGAGAGAAGCCAGATGAAAGGCCATCTTCACATGACAGTGAGCAGGCTTTCGTACAGCTGCGTTTaGTGCTCTGAGCTGATGTTC +
Preference number: 4 (lower is better)
Translates to: LRERSQMKGHLHMTVSRLSYSCV*CSELMF
Trigger: GAACATCAGCTCAGAGCACCAAACGCAGCTGTACGA...AAGCCTGCTCACTGTCATGTGAAGATGGCCTTTCATCTGGCTTCTCTCTCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp GCCTGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGCGATTGGAATTGGTTTaGAATGAGTCCCTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: ACYQPRVKRILEGLVACRRLELV*NESLAK
Trigger: CTTTGCAAGGGACTCATTCCAAACCAATTCCAATCG...CCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp GCCTGTAGGGTTCTAACTGGTTGTGATGGAAAAAGGTTGGAGGAAATGCTGGTGCAACCTGATGCCTCCTaGAACCTGTGTTCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: ACRVLTGCDGKRLEEMLVQPDAS*NLCSVE
Trigger: TTCTACAGAACACAGGTTCCAGGAGGCATCAGGTTG...CACCAGCATTTCCTCCAACCTTTTTCCATCACAACCAGTTAGAACCCTACAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTGGAAGGGTGTTGGGGTaGCAGTTTTTATCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: CYQPRVKRILEGLVACRVGRVLG*QFLSLK
Trigger: CTTCAAGGATAAAAACTGCCACCCCAACACCCTTCC...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGGAGGACTGGCTATTAATGGAAGGGTGTTaGGGTGGCAGTTTTTATCCT +
Preference number: 4 (lower is better)
Translates to: LCVCVCVCVCVCVGEDWLLMEGC*GGSFYP
Trigger: AGGATAAAAACTGCCACCCCAACACCCTTCCATTAA...TAGCCAGTCCTCCCCTACACACACACACACACACACACACACACACACACACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp GCCTGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGGCACACTTCACAAGTaGATTTCTTTAACCAAGGAC +
Preference number: 4 (lower is better)
Translates to: ACYQPRVKRILEGLVACRGTLHK*ISLTKD
Trigger: GTCCTTGGTTAAAGAAATCCACTTGTGAAGTGTGCC...CCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp GCAAGCAAAGCAGGAATCATAGATTTCTTCTGGAAAGATGTTAGAATTTTGCTGCAGGGAGGCGGGGTCTaGAGGAGCTGCGGGAATCAT +
Preference number: 4 (lower is better)
Translates to: ASKAGIIDFFWKDVRILLQGGGV*RSCGNH
Trigger: ATGATTCCCGCAGCTCCTCCAGACCCCGCCTCCCTG...CAGCAAAATTCTAACATCTTTCCAGAAGAAATCTATGATTCCTGCTTTGCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp CAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGACAAGGACGACCCCGCACACTTTGCTCTaGAGCTTTCTAGTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: QETFETVLQYSLLQTRTTPHTLL*SFLVAW
Trigger: CCAGGCTACTAGAAAGCTCCAGAGCAAAGTGTGCGG...GGTCGTCCTTGTCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp CAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGACAAGGACGACCTGTGTAGGGGAGGACTaGCTAGGAAAGCAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: QETFETVLQYSLLQTRTTCVGED*LGKQAE
Trigger: CTCTGCTTGCTTTCCTAGCCAGTCCTCCCCTACACA...GGTCGTCCTTGTCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp GCAAGCAAAGCAGGAATCATAGATTTCTTCTGGAAAGATGTTAGAATTTTGCTGTTGGTCTGGAAGTGCTaGGATGCGTGGACCCGCTGG +
Preference number: 4 (lower is better)
Translates to: ASKAGIIDFFWKDVRILLLVWKC*DAWTRW
Trigger: CCAGCGGGTCCACGCATCTCAGCACTTCCAGACCAA...CAGCAAAATTCTAACATCTTTCCAGAAGAAATCTATGATTCCTGCTTTGCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTTTTGGTGCTCTGAGCTaGTGTTCTGGAAGAATTCTG +
Preference number: 4 (lower is better)
Translates to: CYQPRVKRILEGLVACRVFGALS*CSGRIL
Trigger: CAGAATTCTTCCAGAACATCAGCTCAGAGCACCAAA...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TGCCTGGAGAATCCATTCTGGGGCTTAAAGGCAGACATTACCCATCAGTTGGAGTATCACATGACTCCATaGGAGGTTAGTAAGGAGAAC +
Preference number: 4 (lower is better)
Translates to: CLENPFWGLKADITHQLEYHMTP*EVSKEN
Trigger: GTTCTCCTTACTAACCTCTCATGGAGTCATGTGATA...CTCCAACTGATGGGTAATGTCTGCCTTTAAGCCCCAGAATGGATTCTCCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TGCCTGGAGAATCCATTCTGGGGCTTAAAGGCAGACATTACCCATCAGTTGGAGATGGCTGTTATCACATaGCTCCATGAGAGGTTAGTA +
Preference number: 4 (lower is better)
Translates to: CLENPFWGLKADITHQLEMAVIT*LHERLV
Trigger: TACTAACCTCTCATGGAGTCATGTGATAACAGCCAT...CTCCAACTGATGGGTAATGTCTGCCTTTAAGCCCCAGAATGGATTCTCCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp GCCTGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGCCAAAAAGCACACAGTaGACGATTCCAAACTATGAA +
Preference number: 4 (lower is better)
Translates to: ACYQPRVKRILEGLVACRPKSTQ*TIPNYE
Trigger: TTCATAGTTTGGAATCGTTCACTGTGTGCTTTTTGG...CCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TTATATACAGTAGCTGCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTGCAGGCTTGCACAACTaGCCAAAGACGGACACAGAA +
Preference number: 4 (lower is better)
Translates to: LYTVAATNSFTSCKRDVAAGLHN*PKTDTE
Trigger: TTCTGTGTCCGTCTTTGGTCAGTTGTGCAAGCCTGC...AGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGCAGCTACTGTATATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TTATATACAGTAGCTGCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTGAGAACCAGTGCAACTaGAGTTTCCACTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LYTVAATNSFTSCKRDVAENQCN*SFHCLL
Trigger: CAGCAGGCAGTGGAAACTTCAGTTGCACTGGTTCTC...AGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGCAGCTACTGTATATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp AACTTGAGACTGTTAATCTCAGGAGTTCAAACCCTGGGCAGGTCTGAATGCTTAAACCCTGGGCAGGTCTaGATGCTTAGCACTAAACCT +
Preference number: 4 (lower is better)
Translates to: NLRLLISGVQTLGRSECLNPGQV*MLSTKP
Trigger: AGGTTTAGTGCTAAGCATTCAGACCTGCCCAGGGTT...TAAGCATTCAGACCTGCCCAGGGTTTGAACTCCTGAGATTAACAGTCTCAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547956.1
CDS-3UTR GCA 90 bp TCACCAGAACACAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGATCATCCACCACCAAGTaGTTCAGGTCGTTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: SPEHKKPLRQCCSIHFYRSSTTK*FRSLGV
Trigger: GACCCCCAACGACCTGAAGCACTTGGTGGTGGATGA...TCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp AGTGAACGATTCCAAACTATGAAACTGAAGAAGCACTCATCAAGAGATCATCTGGGAACTTCAGGTAGCTaGCCACTCCTGCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SERFQTMKLKKHSSRDHLGTSGS*PLLPAA
Trigger: TGCAGCTGGCAGGAGTGGGCAGCTACCTGAAGTTCC...CAGATGATCTCTTGATGAGTGCTTCTTCAGTTTCATAGTTTGGAATCGTTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp CAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGACAAGGACGACCCCATCCTATTTCCCCTaGAAAGACAGCTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: QETFETVLQYSLLQTRTTPSYFP*KDSCPS
Trigger: GGAAGGACAGCTGTCTTTGCAGGGGAAATAGGATGG...GGTCGTCCTTGTCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TTATATACAGTAGCTGCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTCAAGGGTATAGTTGCTaGGCCCTTCACAAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: LYTVAATNSFTSCKRDVAQGYSC*ALHKGE
Trigger: CTCCCCTTTGTGAAGGGCGCAGCAACTATACCCTTG...AGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGCAGCTACTGTATATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TGGAATTCACCAGAACACAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCGAAGTTTCCACTGCCTaGTGCTCTCCTGTGGCATCC +
Preference number: 4 (lower is better)
Translates to: WNSPEHKKPLRQCCSIHFEVSTA*CSPVAS
Trigger: GGATGCCACAGGAGAGCAGCAGGCAGTGGAAACTTC...GAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGAATTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp ACCATTGCAAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACATTAATCGACCCCTGTaGTTCATGCCTTTGCCACCA +
Preference number: 4 (lower is better)
Translates to: TIANPQVYESHLGISHLYINRPL*FMPLPP
Trigger: TGGTGGCAAAGGCATGAAGCACAGGGGTCGATTAAT...GTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTTGCAATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp GCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTCAAACTTCAACTGAGTGCCTCTGCTTCTTCTaGCAACTCTATCTCAGCACT +
Preference number: 4 (lower is better)
Translates to: ATNSFTSCKRDVAQTSTECLCFF*QLYLST
Trigger: AGTGCTGAGATAGAGTTGGCAGAAGAAGCAGAGGCA...CTCAGTTGAAGTTTGAGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TGGAATTCACCAGAACACAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCGGAAGGTGCCGGAGTTaGTCTGGAAGTGCTGAGATG +
Preference number: 4 (lower is better)
Translates to: WNSPEHKKPLRQCCSIHFGRCRS*SGSAEM
Trigger: CATCTCAGCACTTCCAGACCAACTCCGGCACCTTCC...GAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGAATTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TCACCAGAACACAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGACACTTCCAGCAGCGCTaGCTTCATGGCTTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: SPEHKKPLRQCCSIHFYRHFQQR*LHGFVL
Trigger: CAGGACAAAGCCATGAAGCCAGCGCTGCTGGAAGTG...TCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp GGAGTTCAAACCCTGGGCAGGTCTGAATGCTTAGCACTAAACCTAGGCATTTCTATTCCTCCGCATGACTaGGTGCAACATACTTTGGAA +
Preference number: 4 (lower is better)
Translates to: GVQTLGRSECLALNLGISIPPHD*VQHTLE
Trigger: TTCCAAAGTATGTTGCACCCAGTCATGCGGAGGAAT...AGAAATGCCTAGGTTTAGTGCTAAGCATTCAGACCTGCCCAGGGTTTGAACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547956.1
CDS-3UTR CCA 90 bp GTGTTGGGGTGGCAGTTTTTATCCTTGAAGACCTCAGATATGCTAAGTCAACCTGCGGTGGTTGATTTCTaGGATGCTGTACTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: VLGWQFLSLKTSDMLSQPAVVDF*DAVLVQ
Trigger: CTGAACCAGTACAGCATCCCAGAAATCAACCACCGC...AGGTTGACTTAGCATATCTGAGGTCTTCAAGGATAAAAACTGCCACCCCAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp AAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACGTGGCAAGCAGGTCGATTGGAATTaGTTTGGAATGAGTCCCTTG +
Preference number: 4 (lower is better)
Translates to: KSPSVRVSPWHFTLVRGKQVDWN*FGMSPL
Trigger: CAAGGGACTCATTCCAAACCAATTCCAATCGACCTG...CTTGCCACGTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp GTCCCTTGCAAAGATGACTCTAAGTGCAATAGCAACCTACTTATTTCTAGCAGAAGCACCTTTGAGAAGTaGCTGGGAGATGGGACGCCT +
Preference number: 4 (lower is better)
Translates to: VPCKDDSKCNSNLLISSRSTFEK*LGDGTP
Trigger: AGGCGTCCCATCTCCCAGCCACTTCTCAAAGGTGCT...TCTGCTAGAAATAAGTAGGTTGCTATTGCACTTAGAGTCATCTTTGCAAGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TTAAGAGAGAGAAGCCAGATGAAAGGCCATCTTCACATGACAGTGAGCAGGCTTAGCTTTCTAGTAGCCTaGATTAATCGACCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: LRERSQMKGHLHMTVSRLSFLVA*INRPLC
Trigger: GCACAGGGGTCGATTAATCCAGGCTACTAGAAAGCT...AAGCCTGCTCACTGTCATGTGAAGATGGCCTTTCATCTGGCTTCTCTCTCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TGGAATTCACCAGAACACAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCCCAGCCAAGCATTTGTaGGACCCGCACACTTTGCTC +
Preference number: 4 (lower is better)
Translates to: WNSPEHKKPLRQCCSIHFPAKHL*DPHTLL
Trigger: GAGCAAAGTGTGCGGGTCCCACAAATGCTTGGCTGG...GAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGAATTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCACTGCCTGCTGCTCTCCTTTTTCACGCTTTTGTTaGCAATGTGGAATTCAGCTT +
Preference number: 4 (lower is better)
Translates to: FATRRTSATEVSTACCSPFSRFC*QCGIQL
Trigger: AAGCTGAATTCCACATTGCCAACAAAAGCGTGAAAA...AGGAGAGCAGCAGGCAGTGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CAA 72 bp ACACGGGGAGAAAGAGTCCCTCATTCCAGAAACCTATaGATGTCATGTCCCCTGAAGGACAATCTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: TRGERVPHSRNL*MSCPLKDNLSH
Trigger: GTGAGAAAGATTGTCCTTCAGGGGACATGACATCAATAGGTTTCTGGAATGAGGGACTCTTTCTCCCCGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp GCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTCAAACTTCAACTGAGTTTGGTGCTCTGAGCTaGTGTTCTGGAAGAATTCTG +
Preference number: 4 (lower is better)
Translates to: ATNSFTSCKRDVAQTSTEFGALS*CSGRIL
Trigger: CAGAATTCTTCCAGAACATCAGCTCAGAGCACCAAA...CTCAGTTGAAGTTTGAGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTTCACATAAAGCTTTTTaGGGGCCAAGACTATTGGGT +
Preference number: 4 (lower is better)
Translates to: CYQPRVKRILEGLVACRVSHKAF*GPRLLG
Trigger: ACCCAATAGTCTTGGCCCTCAAAAAGCTTTATGTGA...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TGCCTGGAGAATCCATTCTGGGGCTTAAAGGCAGACATTACCCATCAGTTGGAGAGCAATGGCTGGAAATaGGAAGCATGTTTAGATGTT +
Preference number: 4 (lower is better)
Translates to: CLENPFWGLKADITHQLESNGWK*EACLDV
Trigger: AACATCTAAACATGCTTCTCATTTCCAGCCATTGCT...CTCCAACTGATGGGTAATGTCTGCCTTTAAGCCCCAGAATGGATTCTCCAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp CAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGACAAGGACGACCGGCTCAAACTTCAACTaGGAAGCATCAGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: QETFETVLQYSLLQTRTTGSNFN*EASAMA
Trigger: AGCCATTGCTGATGCTTCTCAGTTGAAGTTTGAGCC...GGTCGTCCTTGTCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp AGTGAACGATTCCAAACTATGAAACTGAAGAAGCACTCATCAAGAGATCATCTGTGTGGTCAGTCCTGCTaGCATAGAGGTGGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: SERFQTMKLKKHSSRDHLCGQSC*HRGGQG
Trigger: TCCTTGCCCACCTCTATGTCAGCAGGACTGACCACA...CAGATGATCTCTTGATGAGTGCTTCTTCAGTTTCATAGTTTGGAATCGTTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTCAAAGTGTAGCAGACTaGAATTTGCCTGTTATCAGC +
Preference number: 4 (lower is better)
Translates to: CYQPRVKRILEGLVACRVQSVAD*NLPVIS
Trigger: GCTGATAACAGGCAAATTTCAGTCTGCTACACTTTG...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TTGAGACTGTTAATCTCAGGAGTTCAAACCCTGGGCAGGTCTGAATGCTTAGCATACATAGAAAAAGGGTaGCGGAGAAAGCAACCACTG +
Preference number: 4 (lower is better)
Translates to: LRLLISGVQTLGRSECLAYIEKG*RRKQPL
Trigger: CAGTGGTTGCTTTCTCCGTCACCCTTTTTCTATGTA...TGCTAAGCATTCAGACCTGCCCAGGGTTTGAACTCCTGAGATTAACAGTCTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547956.1
CDS-3UTR GCA 90 bp TCACCAGAACACAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGACCAGTGTCTCGTACTTaGCCACGAGGTCATAGTGGA +
Preference number: 4 (lower is better)
Translates to: SPEHKKPLRQCCSIHFYRPVSRT*PRGHSG
Trigger: TCCACTATGACCTCGTGGGCAAGTACGAGACACTGG...TCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TGCCTGGAGAATCCATTCTGGGGCTTAAAGGCAGACATTACCCATCAGTTGGAGCCCAGTAAAACACATTaGGTAAATCTCCATCCATCA +
Preference number: 4 (lower is better)
Translates to: CLENPFWGLKADITHQLEPSKTH*VNLHPS
Trigger: TGATGGATGGAGATTTACGCAATGTGTTTTACTGGG...CTCCAACTGATGGGTAATGTCTGCCTTTAAGCCCCAGAATGGATTCTCCAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TGCCAACTCTATCTCAGCACTGATCCAGACCCCACCAGCCAAGCATTTGTGGGATGTAAGTTCAGGAAATaGTACAGACTCAAGGATTAT +
Preference number: 4 (lower is better)
Translates to: CQLYLSTDPDPTSQAFVGCKFRK*YRLKDY
Trigger: ATAATCCTTGAGTCTGTAGCATTTCCTGAACTTACA...TCCCACAAATGCTTGGCTGGTGGGGTCTGGATCAGTGCTGAGATAGAGTTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGGAGGACTGGCTAATAAAGTACCTCTGTTaGTATAAACCAGATGGAGAC +
Preference number: 4 (lower is better)
Translates to: LCVCVCVCVCVCVGEDWLIKYLC*YKPDGD
Trigger: GTCTCCATCTGGTTTATAGCAACAGAGGTACTTTAT...TAGCCAGTCCTCCCCTACACACACACACACACACACACACACACACACACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TCACCAGAACACAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGAGACAGTGAGCAGGCTTaGACAACTGACCAAAGACGG +
Preference number: 4 (lower is better)
Translates to: SPEHKKPLRQCCSIHFYRDSEQA*TTDQRR
Trigger: CCGTCTTTGGTCAGTTGTGCAAGCCTGCTCACTGTC...TCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TTATATACAGTAGCTGCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTTCTGGGATGCTGTACTaGTTCAGGGTCTTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LYTVAATNSFTSCKRDVASGMLY*FRVFRL
Trigger: CAACCTGAAGACCCTGAACCAGTACAGCATCCCAGA...AGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGCAGCTACTGTATATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TGGAATTCACCAGAACACAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCGTGGCGTTCTTCCGCTaGCGTTTGATGATCTTGGTG +
Preference number: 4 (lower is better)
Translates to: WNSPEHKKPLRQCCSIHFVAFFR*RLMILV
Trigger: CACCAAGATCATCAAACGCCAGCGGAAGAACGCCAC...GAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGAATTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp GCCTGTAGGGTTCTAACTGGTTGTGATGGAAAAAGGTTGGAGGAAATGCTGGTGCGATTGGAATTGGTTTaGAATGAGTCCCTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: ACRVLTGCDGKRLEEMLVRLELV*NESLAK
Trigger: CTTTGCAAGGGACTCATTCCAAACCAATTCCAATCG...CACCAGCATTTCCTCCAACCTTTTTCCATCACAACCAGTTAGAACCCTACAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TTAAGAGAGAGAAGCCAGATGAAAGGCCATCTTCACATGACAGTGAGCAGGCTTCTGGAGAATCCATTCTaGGGCTTAAAGGCAGACATT +
Preference number: 4 (lower is better)
Translates to: LRERSQMKGHLHMTVSRLLENPF*GLKADI
Trigger: AATGTCTGCCTTTAAGCCCCAGAATGGATTCTCCAG...AAGCCTGCTCACTGTCATGTGAAGATGGCCTTTCATCTGGCTTCTCTCTCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TTAAGAGAGAGAAGCCAGATGAAAGGCCATCTTCACATGACAGTGAGCAGGCTTGTACGAGTCTCACCTTaGCATTTCACACTTGTACGT +
Preference number: 4 (lower is better)
Translates to: LRERSQMKGHLHMTVSRLVRVSP*HFTLVR
Trigger: ACGTACAAGTGTGAAATGCCAAGGTGAGACTCGTAC...AAGCCTGCTCACTGTCATGTGAAGATGGCCTTTCATCTGGCTTCTCTCTCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp ACCATTGCAAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACGCTGTAAGAGGGATGTaGCTCAAACTTCAACTGAGA +
Preference number: 4 (lower is better)
Translates to: TIANPQVYESHLGISHLYAVRGM*LKLQLR
Trigger: TCTCAGTTGAAGTTTGAGCCACATCCCTCTTACAGC...GTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTTGCAATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TTATATACAGTAGCTGCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTAAGGGATTTGGTCACTaGGATTGCACAGAATGGCGC +
Preference number: 4 (lower is better)
Translates to: LYTVAATNSFTSCKRDVAKGFGH*DCTEWR
Trigger: GCGCCATTCTGTGCAATCCCAGTGACCAAATCCCTT...AGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGCAGCTACTGTATATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp GCCTGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGTTTTCACGCTTTTGTTaGCAATGTGGAATTCAGCTT +
Preference number: 4 (lower is better)
Translates to: ACYQPRVKRILEGLVACRFSRFC*QCGIQL
Trigger: AAGCTGAATTCCACATTGCCAACAAAAGCGTGAAAA...CCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp AACTTGAGACTGTTAATCTCAGGAGTTCAAACCCTGGGCAGGTCTGAATGCTTAGAAGCTTACCTGGATTaGGTTGTAGAGTTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: NLRLLISGVQTLGRSECLEAYLD*VVEFLQ
Trigger: CTGCAGGAACTCTACAACCCAATCCAGGTAAGCTTC...TAAGCATTCAGACCTGCCCAGGGTTTGAACTCCTGAGATTAACAGTCTCAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547956.1
3UTR CAA 72 bp AAACCATTGCAAATCCCCAAGTGTACGAGTCTCACCTaGGCATTTCACACTTGTACGTGGCAAGCAGTAGAA +
Preference number: 4 (lower is better)
Translates to: KPLQIPKCTSLT*AFHTCTWQAVE
Trigger: TTCTACTGCTTGCCACGTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTTGCAATGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp GCAAGCAAAGCAGGAATCATAGATTTCTTCTGGAAAGATGTTAGAATTTTGCTGGCACGTAGCAGTAGATaGGCTCGTGGTCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: ASKAGIIDFFWKDVRILLARSSR*ARGPHP
Trigger: TGGATGAGGACCACGAGCTCATCTACTGCTACGTGC...CAGCAAAATTCTAACATCTTTCCAGAAGAAATCTATGATTCCTGCTTTGCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TCACCAGAACACAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGACAAACTCCTCGAATTTaGCATCGTCCCCTTTGCGCA +
Preference number: 4 (lower is better)
Translates to: SPEHKKPLRQCCSIHFYRQTPRI*HRPLCA
Trigger: TGCGCAAAGGGGACGATGTCAAATTCGAGGAGTTTG...TCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp CAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGACAAGGACGACCGGAATTGGTTTGGAATaGGTCCCTTGCAAAGATGAC +
Preference number: 4 (lower is better)
Translates to: QETFETVLQYSLLQTRTTGIGLE*VPCKDD
Trigger: GTCATCTTTGCAAGGGACTCATTCCAAACCAATTCC...GGTCGTCCTTGTCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TTAAGAGAGAGAAGCCAGATGAAAGGCCATCTTCACATGACAGTGAGCAGGCTTCTCATGTCAAGTCCATaGATAATATCAGGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: LRERSQMKGHLHMTVSRLLMSSP*IISGVC
Trigger: GCAAACCCCTGATATTATTCATGGACTTGACATGAG...AAGCCTGCTCACTGTCATGTGAAGATGGCCTTTCATCTGGCTTCTCTCTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp ACCATTGCAAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACCCACTGAGCTTGCTGTaGGCTTTACAATACAATCTT +
Preference number: 4 (lower is better)
Translates to: TIANPQVYESHLGISHLYPLSLL*ALQYNL
Trigger: AAGATTGTATTGTAAAGCTCACAGCAAGCTCAGTGG...GTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTTGCAATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp ATTCACTTCTACAGACAAGGACGACCCATCCTATTTCCCCTGCAAAGACAGCTGCCAAAAAGCACACAGTaGACGATTCCAAACTATGAA +
Preference number: 4 (lower is better)
Translates to: IHFYRQGRPILFPLQRQLPKSTQ*TIPNYE
Trigger: TTCATAGTTTGGAATCGTTCACTGTGTGCTTTTTGG...CAGCTGTCTTTGCAGGGGAAATAGGATGGGTCGTCCTTGTCTGTAGAAGTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp ATTCACTTCTACAGACAAGGACGACCCATCCTATTTCCCCTGCAAAGACAGCTGAAATGCAAAGCAACGTaGATTTCCATTGAAAACCCC +
Preference number: 4 (lower is better)
Translates to: IHFYRQGRPILFPLQRQLKCKAT*ISIENP
Trigger: GGGGTTTTCAATGGAAATTCACGTTGCTTTGCATTT...CAGCTGTCTTTGCAGGGGAAATAGGATGGGTCGTCCTTGTCTGTAGAAGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TTAAGAGAGAGAAGCCAGATGAAAGGCCATCTTCACATGACAGTGAGCAGGCTTCACTCCACAAAGATGTaGCATTACATGTCCATATGC +
Preference number: 4 (lower is better)
Translates to: LRERSQMKGHLHMTVSRLHSTKM*HYMSIC
Trigger: GCATATGGACATGTAATGTCACATCTTTGTGGAGTG...AAGCCTGCTCACTGTCATGTGAAGATGGCCTTTCATCTGGCTTCTCTCTCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp AAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACGTGGCAAGCAAAGGCTACTTCATTaGGCTCCAACGATCTATATA +
Preference number: 4 (lower is better)
Translates to: KSPSVRVSPWHFTLVRGKQRLLH*APTIYI
Trigger: TATATAGATCGTTGGAGCGCAATGAAGTAGCCTTTG...CTTGCCACGTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp CAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGACAAGGACGACCAGTTCTCGTAGACTTTaGATAGGTGGGGAACTTCAG +
Preference number: 4 (lower is better)
Translates to: QETFETVLQYSLLQTRTTSSRRL*IGGELQ
Trigger: CTGAAGTTCCCCACCTATGCAAAGTCTACGAGAACT...GGTCGTCCTTGTCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TCACCAGAACACAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGACCATCCTATTTCCCCTaGAAAGACAGCTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SPEHKKPLRQCCSIHFYRPSYFP*KDSCPS
Trigger: GGAAGGACAGCTGTCTTTGCAGGGGAAATAGGATGG...TCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp GCCTGTAGGGTTCTAACTGGTTGTGATGGAAAAAGGTTGGAGGAAATGCTGGTGCCTTTGAGACAGTGTTaGAGTATTCACTTCTACAGA +
Preference number: 4 (lower is better)
Translates to: ACRVLTGCDGKRLEEMLVPLRQC*SIHFYR
Trigger: TCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGG...CACCAGCATTTCCTCCAACCTTTTTCCATCACAACCAGTTAGAACCCTACAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp AACTTGAGACTGTTAATCTCAGGAGTTCAAACCCTGGGCAGGTCTGAATGCTTACACATGCTGACAGAGTaGTTGAAGCTTACCTGGATT +
Preference number: 4 (lower is better)
Translates to: NLRLLISGVQTLGRSECLHMLTE*LKLTWI
Trigger: AATCCAGGTAAGCTTCAAGCACTCTGTCAGCATGTG...TAAGCATTCAGACCTGCCCAGGGTTTGAACTCCTGAGATTAACAGTCTCAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547956.1
CDS-3UTR GCA 90 bp CTAGATTTTTCAGAGATGCTACATAGAAAAAGGGTGACGGAGAAAGCAACCACTCTGGGCAGGTCTGAATaGTTAGCACTAAACCTAGGC +
Preference number: 4 (lower is better)
Translates to: LDFSEMLHRKRVTEKATTLGRSE*LALNLG
Trigger: GCCTAGGTTTAGTGCTAAGCATTCAGACCTGCCCAG...AGTGGTTGCTTTCTCCGTCACCCTTTTTCTATGTAGCATCTCTGAAAAATCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000547956.1
CDS-3UTR CCA 90 bp TCACCAGAACACAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGATCGTACAGCTGCGTTTaGTGCTCTGAGCTGATGTTC +
Preference number: 4 (lower is better)
Translates to: SPEHKKPLRQCCSIHFYRSYSCV*CSELMF
Trigger: GAACATCAGCTCAGAGCACCAAACGCAGCTGTACGA...TCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp GCCTGTAGGGTTCTAACTGGTTGTGATGGAAAAAGGTTGGAGGAAATGCTGGTGGGAATGCACAATTCATaGAATTCACCAGAACACAAG +
Preference number: 4 (lower is better)
Translates to: ACRVLTGCDGKRLEEMLVGMHNS*NSPEHK
Trigger: CTTGTGTTCTGGTGAATTCCATGAATTGTGCATTCC...CACCAGCATTTCCTCCAACCTTTTTCCATCACAACCAGTTAGAACCCTACAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp ACGATTCCAAACTATGAAACTGAAGAAGCACTCATCAAGAGATCATCTGTTCCCGACAACACTTCTACATaGGGATGTGGTGCTAGGCTG +
Preference number: 4 (lower is better)
Translates to: TIPNYETEEALIKRSSVPDNTST*GCGARL
Trigger: CAGCCTAGCACCACATCCCCATGTAGAAGTGTTGTC...GGGAACAGATGATCTCTTGATGAGTGCTTCTTCAGTTTCATAGTTTGGAATCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp GTCCCTTGCAAAGATGACTCTAAGTGCAATAGCAACCTACTTATTTCTAGCAGAGGCAAGGAAGGGATTTaGTCACTGGGATTGCACAGA +
Preference number: 4 (lower is better)
Translates to: VPCKDDSKCNSNLLISSRGKEGI*SLGLHR
Trigger: TCTGTGCAATCCCAGTGACCAAATCCCTTCCTTGCC...TCTGCTAGAAATAAGTAGGTTGCTATTGCACTTAGAGTCATCTTTGCAAGGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp CAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGACAAGGACGACCATGGCTGTTATCACATaGCTCCATGAGAGGTTAGTA +
Preference number: 4 (lower is better)
Translates to: QETFETVLQYSLLQTRTTMAVIT*LHERLV
Trigger: TACTAACCTCTCATGGAGTCATGTGATAACAGCCAT...GGTCGTCCTTGTCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp CAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGACAAGGACGACCTGGCATCCATACACATaGCAATGGCTGTTATCACAT +
Preference number: 4 (lower is better)
Translates to: QETFETVLQYSLLQTRTTWHPYT*QWLLSH
Trigger: ATGTGATAACAGCCATTGTCATGTGTATGGATGCCA...GGTCGTCCTTGTCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TCACCAGAACACAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGAGGCTCAAACTTCAACTaGGAAGCATCAGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: SPEHKKPLRQCCSIHFYRGSNFN*EASAMA
Trigger: AGCCATTGCTGATGCTTCTCAGTTGAAGTTTGAGCC...TCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TTAAGAGAGAGAAGCCAGATGAAAGGCCATCTTCACATGACAGTGAGCAGGCTTAAAAATAATCAGGCTTaGATGGCTTTTCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LRERSQMKGHLHMTVSRLKNNQA*MAFPGG
Trigger: TCCTCCAGGAAAAGCCATTCAAGCCTGATTATTTTT...AAGCCTGCTCACTGTCATGTGAAGATGGCCTTTCATCTGGCTTCTCTCTCTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp ACCATTGCAAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACAATTGTCGAGCTGGATaGTCTATGTCACATAAAGCT +
Preference number: 4 (lower is better)
Translates to: TIANPQVYESHLGISHLYNCRAG*SMSHKA
Trigger: AGCTTTATGTGACATAGAGCATCCAGCTCGACAATT...GTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTTGCAATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp ACCATTGCAAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACCCCAGTAAAACACATTaGGTAAATCTCCATCCATCA +
Preference number: 4 (lower is better)
Translates to: TIANPQVYESHLGISHLYPSKTH*VNLHPS
Trigger: TGATGGATGGAGATTTACGCAATGTGTTTTACTGGG...GTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTTGCAATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TGCCTGGAGAATCCATTCTGGGGCTTAAAGGCAGACATTACCCATCAGTTGGAGCTGTGTTCTGTAGAATaGGTATTAGAAAATGTTGGA +
Preference number: 4 (lower is better)
Translates to: CLENPFWGLKADITHQLELCSVE*VLENVG
Trigger: TCCAACATTTTCTAATACGCATTCTACAGAACACAG...CTCCAACTGATGGGTAATGTCTGCCTTTAAGCCCCAGAATGGATTCTCCAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp ACGATTCCAAACTATGAAACTGAAGAAGCACTCATCAAGAGATCATCTGTTCCCTTTGGGGATTCACCATaGACAGCACACATTGAAGGC +
Preference number: 4 (lower is better)
Translates to: TIPNYETEEALIKRSSVPFGDSP*TAHIEG
Trigger: GCCTTCAATGTGTGCTGTGCATGGTGAATCCCCAAA...GGGAACAGATGATCTCTTGATGAGTGCTTCTTCAGTTTCATAGTTTGGAATCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TCACCAGAACACAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGAAAGCAGGAATGTCCTTaGAAATACTGCCCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: SPEHKKPLRQCCSIHFYRKQECP*KYCPGC
Trigger: ACAGCCAGGGCAGTATTTGCAAGGACATTCCTGCTT...TCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp AGTGAACGATTCCAAACTATGAAACTGAAGAAGCACTCATCAAGAGATCATCTGGTGCCGTACCGCTTGTaGAAGGAGATGTTGTACTTC +
Preference number: 4 (lower is better)
Translates to: SERFQTMKLKKHSSRDHLVPYRL*KEMLYF
Trigger: GAAGTACAACATCTCCTTCCACAAGCGGTACGGCAC...CAGATGATCTCTTGATGAGTGCTTCTTCAGTTTCATAGTTTGGAATCGTTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp GCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTCAAACTTCAACTGAGGGAATGCACAATTCATaGAATTCACCAGAACACAAG +
Preference number: 4 (lower is better)
Translates to: ATNSFTSCKRDVAQTSTEGMHNS*NSPEHK
Trigger: CTTGTGTTCTGGTGAATTCCATGAATTGTGCATTCC...CTCAGTTGAAGTTTGAGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp GTCCCTTGCAAAGATGACTCTAAGTGCAATAGCAACCTACTTATTTCTAGCAGACAACCTGATGCCTCCTaGAACCTGTGTTCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: VPCKDDSKCNSNLLISSRQPDAS*NLCSVE
Trigger: TTCTACAGAACACAGGTTCCAGGAGGCATCAGGTTG...TCTGCTAGAAATAAGTAGGTTGCTATTGCACTTAGAGTCATCTTTGCAAGGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp GCAAGCAAAGCAGGAATCATAGATTTCTTCTGGAAAGATGTTAGAATTTTGCTGCCGCACACTTTGCTCTaGAGCTTTCTAGTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: ASKAGIIDFFWKDVRILLPHTLL*SFLVAW
Trigger: CCAGGCTACTAGAAAGCTCCAGAGCAAAGTGTGCGG...CAGCAAAATTCTAACATCTTTCCAGAAGAAATCTATGATTCCTGCTTTGCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp ACCATTGCAAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACTTGAATGGCTTTTCCTaGAGGAAGGTTCATGAACAT +
Preference number: 4 (lower is better)
Translates to: TIANPQVYESHLGISHLYLNGFS*RKVHEH
Trigger: ATGTTCATGAACCTTCCTCCAGGAAAAGCCATTCAA...GTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTTGCAATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TTAAGAGAGAGAAGCCAGATGAAAGGCCATCTTCACATGACAGTGAGCAGGCTTTTGAATGGCTTTTCCTaGAGGAAGGTTCATGAACAT +
Preference number: 4 (lower is better)
Translates to: LRERSQMKGHLHMTVSRLLNGFS*RKVHEH
Trigger: ATGTTCATGAACCTTCCTCCAGGAAAAGCCATTCAA...AAGCCTGCTCACTGTCATGTGAAGATGGCCTTTCATCTGGCTTCTCTCTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp GTCCCTTGCAAAGATGACTCTAAGTGCAATAGCAACCTACTTATTTCTAGCAGATTTTCAAGCGGTGGTTaGTTTCTGGGATGCTGTACT +
Preference number: 4 (lower is better)
Translates to: VPCKDDSKCNSNLLISSRFSSGG*FLGCCT
Trigger: AGTACAGCATCCCAGAAATCAACCACCGCTTGAAAA...TCTGCTAGAAATAAGTAGGTTGCTATTGCACTTAGAGTCATCTTTGCAAGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TTATATACAGTAGCTGCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTTGGCATCCATACACATaGCAATGGCTGTTATCACAT +
Preference number: 4 (lower is better)
Translates to: LYTVAATNSFTSCKRDVAWHPYT*QWLLSH
Trigger: ATGTGATAACAGCCATTGTCATGTGTATGGATGCCA...AGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGCAGCTACTGTATATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp AGTGAACGATTCCAAACTATGAAACTGAAGAAGCACTCATCAAGAGATCATCTGTTTTCTGTTGGTCAGTaGGCTTGGGATCACTCACGA +
Preference number: 4 (lower is better)
Translates to: SERFQTMKLKKHSSRDHLFSVGQ*AWDHSR
Trigger: TCGTGAGTGATCCCAAGCTCACTGACCAACAGAAAA...CAGATGATCTCTTGATGAGTGCTTCTTCAGTTTCATAGTTTGGAATCGTTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp ACGATTCCAAACTATGAAACTGAAGAAGCACTCATCAAGAGATCATCTGTTCCCGGTTCTAACTGGTTGTaGTGGAAAAAGGTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: TIPNYETEEALIKRSSVPGSNWL*WKKVGG
Trigger: TCCTCCAACCTTTTTCCATCACAACCAGTTAGAACC...GGGAACAGATGATCTCTTGATGAGTGCTTCTTCAGTTTCATAGTTTGGAATCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp GTGTTGGGGTGGCAGTTTTTATCCTTGAAGACCTCAGATATGCTAAGTCAACCTAAAAATAATCAGGCTTaGATGGCTTTTCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: VLGWQFLSLKTSDMLSQPKNNQA*MAFPGG
Trigger: TCCTCCAGGAAAAGCCATTCAAGCCTGATTATTTTT...AGGTTGACTTAGCATATCTGAGGTCTTCAAGGATAAAAACTGCCACCCCAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp GCAAGCAAAGCAGGAATCATAGATTTCTTCTGGAAAGATGTTAGAATTTTGCTGATGGAAGGCTGTCCTTaGTGCTCATGCATGGCAGTT +
Preference number: 4 (lower is better)
Translates to: ASKAGIIDFFWKDVRILLMEGCP*CSCMAV
Trigger: AACTGCCATGCATGAGCAGCAAGGACAGCCTTCCAT...CAGCAAAATTCTAACATCTTTCCAGAAGAAATCTATGATTCCTGCTTTGCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp GCAAGCAAAGCAGGAATCATAGATTTCTTCTGGAAAGATGTTAGAATTTTGCTGCATCAAGGGTATAGTTaGTGCGCCCTTCACAAAGGG +
Preference number: 4 (lower is better)
Translates to: ASKAGIIDFFWKDVRILLHQGYS*CALHKG
Trigger: CCCTTTGTGAAGGGCGCAGCAACTATACCCTTGATG...CAGCAAAATTCTAACATCTTTCCAGAAGAAATCTATGATTCCTGCTTTGCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp CTAGATTTTTCAGAGATGCTACATAGAAAAAGGGTGACGGAGAAAGCAACCACTCCACTGAAGGTAAAATaGCAGGCTGTGAAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LDFSEMLHRKRVTEKATTPLKVK*QAVKGS
Trigger: ACTTCCTTTCACAGCCTGGCATTTTACCTTCAGTGG...AGTGGTTGCTTTCTCCGTCACCCTTTTTCTATGTAGCATCTCTGAAAAATCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000547956.1
CDS-3UTR CCA 90 bp TGGAATTCACCAGAACACAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCATTCCTCCGCATGACTaGGTGCAACATACTTTGGAA +
Preference number: 4 (lower is better)
Translates to: WNSPEHKKPLRQCCSIHFIPPHD*VQHTLE
Trigger: TTCCAAAGTATGTTGCACCCAGTCATGCGGAGGAAT...GAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGAATTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303694.6
CDS-3UTR CCA 90 bp GCAAGCAAAGCAGGAATCATAGATTTCTTCTGGAAAGATGTTAGAATTTTGCTGTCTGGGATGCTGTACTaGTTCAGGGTCTTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: ASKAGIIDFFWKDVRILLSGMLY*FRVFRL
Trigger: CAACCTGAAGACCCTGAACCAGTACAGCATCCCAGA...CAGCAAAATTCTAACATCTTTCCAGAAGAAATCTATGATTCCTGCTTTGCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp CAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGACAAGGACGACCTCTGAGCTGATGTTCTaGAAGAATTCTGTGGTCATT +
Preference number: 4 (lower is better)
Translates to: QETFETVLQYSLLQTRTTSELMF*KNSVVI
Trigger: AATGACCACAGAATTCTTCCAGAACATCAGCTCAGA...GGTCGTCCTTGTCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TCACCAGAACACAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGACACCTTCACTGCAACTaGCACCGCCAGTTTAAAATT +
Preference number: 4 (lower is better)
Translates to: SPEHKKPLRQCCSIHFYRHLHCN*HRQFKI
Trigger: AATTTTAAACTGGCGGTGCCAGTTGCAGTGAAGGTG...TCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp GTCCCTTGCAAAGATGACTCTAAGTGCAATAGCAACCTACTTATTTCTAGCAGAACATTACCCATCAGTTaGAGCAGGCACATGATAGGA +
Preference number: 4 (lower is better)
Translates to: VPCKDDSKCNSNLLISSRTLPIS*SRHMIG
Trigger: TCCTATCATGTGCCTGCTCCAACTGATGGGTAATGT...TCTGCTAGAAATAAGTAGGTTGCTATTGCACTTAGAGTCATCTTTGCAAGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TTATATACAGTAGCTGCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTTTTCACACTTGTACGTaGCAAGCAGTAGAAGACAAC +
Preference number: 4 (lower is better)
Translates to: LYTVAATNSFTSCKRDVAFHTCT*QAVEDN
Trigger: GTTGTCTTCTACTGCTTGCCACGTACAAGTGTGAAA...AGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGCAGCTACTGTATATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp ACGATTCCAAACTATGAAACTGAAGAAGCACTCATCAAGAGATCATCTGTTCCCGCTGTAAGAGGGATGTaGCTCAAACTTCAACTGAGA +
Preference number: 4 (lower is better)
Translates to: TIPNYETEEALIKRSSVPAVRGM*LKLQLR
Trigger: TCTCAGTTGAAGTTTGAGCCACATCCCTCTTACAGC...GGGAACAGATGATCTCTTGATGAGTGCTTCTTCAGTTTCATAGTTTGGAATCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp AGTGAACGATTCCAAACTATGAAACTGAAGAAGCACTCATCAAGAGATCATCTGGGAAGGGTGTTGGGGTaGCAGTTTTTATCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: SERFQTMKLKKHSSRDHLGRVLG*QFLSLK
Trigger: CTTCAAGGATAAAAACTGCCACCCCAACACCCTTCC...CAGATGATCTCTTGATGAGTGCTTCTTCAGTTTCATAGTTTGGAATCGTTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp GTCCCTTGCAAAGATGACTCTAAGTGCAATAGCAACCTACTTATTTCTAGCAGACATAAGAAAGTAGTATaGGCAGCTCCTTCTGGACCT +
Preference number: 4 (lower is better)
Translates to: VPCKDDSKCNSNLLISSRHKKVV*AAPSGP
Trigger: AGGTCCAGAAGGAGCTGCCCATACTACTTTCTTATG...TCTGCTAGAAATAAGTAGGTTGCTATTGCACTTAGAGTCATCTTTGCAAGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CAA 72 bp AAATGTAAATTTGTAGGGGTCATGGACCTTCTGCTGTaGCTCATGAATAGTCCAAACCTCATGTCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: KCKFVGVMDLLL*LMNSPNLMSSP
Trigger: TGGACTTGACATGAGGTTTGGACTATTCATGAGCAACAGCAGAAGGTCCATGACCCCTACAAATTTACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp AGTGAACGATTCCAAACTATGAAACTGAAGAAGCACTCATCAAGAGATCATCTGTTTTCAAGCGGTGGTTaGTTTCTGGGATGCTGTACT +
Preference number: 4 (lower is better)
Translates to: SERFQTMKLKKHSSRDHLFSSGG*FLGCCT
Trigger: AGTACAGCATCCCAGAAATCAACCACCGCTTGAAAA...CAGATGATCTCTTGATGAGTGCTTCTTCAGTTTCATAGTTTGGAATCGTTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TCACCAGAACACAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGATATCACATGACTCCATaGGAGGTTAGTAAGGAGAAC +
Preference number: 4 (lower is better)
Translates to: SPEHKKPLRQCCSIHFYRYHMTP*EVSKEN
Trigger: GTTCTCCTTACTAACCTCTCATGGAGTCATGTGATA...TCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TCACCAGAACACAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGATCACATAAAGCTTTTTaGGGGCCAAGACTATTGGGT +
Preference number: 4 (lower is better)
Translates to: SPEHKKPLRQCCSIHFYRSHKAF*GPRLLG
Trigger: ACCCAATAGTCTTGGCCCTCAAAAAGCTTTATGTGA...TCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TTATATACAGTAGCTGCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTAGCAATGGCTGGAAATaGGAAGCATGTTTAGATGTT +
Preference number: 4 (lower is better)
Translates to: LYTVAATNSFTSCKRDVASNGWK*EACLDV
Trigger: AACATCTAAACATGCTTCTCATTTCCAGCCATTGCT...AGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGCAGCTACTGTATATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp TCACCAGAACACAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGACAAAGTGTAGCAGACTaGAATTTGCCTGTTATCAGC +
Preference number: 4 (lower is better)
Translates to: SPEHKKPLRQCCSIHFYRQSVAD*NLPVIS
Trigger: GCTGATAACAGGCAAATTTCAGTCTGCTACACTTTG...TCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TTATATACAGTAGCTGCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTAGGCTGAAAAGTCCTTaGAGAAAGGAAACTGACTTA +
Preference number: 4 (lower is better)
Translates to: LYTVAATNSFTSCKRDVARLKSP*RKETDL
Trigger: TAAGTCAGTTTCCTTTCTGCAAGGACTTTTCAGCCT...AGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGCAGCTACTGTATATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp AGTGAACGATTCCAAACTATGAAACTGAAGAAGCACTCATCAAGAGATCATCTGACATTACCCATCAGTTaGAGCAGGCACATGATAGGA +
Preference number: 4 (lower is better)
Translates to: SERFQTMKLKKHSSRDHLTLPIS*SRHMIG
Trigger: TCCTATCATGTGCCTGCTCCAACTGATGGGTAATGT...CAGATGATCTCTTGATGAGTGCTTCTTCAGTTTCATAGTTTGGAATCGTTCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TGGAATTCACCAGAACACAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCCTCAAGGATTATTTTTaGGGATTCACCATGCACAGC +
Preference number: 4 (lower is better)
Translates to: WNSPEHKKPLRQCCSIHFLKDYF*GFTMHS
Trigger: GCTGTGCATGGTGAATCCCCAAAAATAATCCTTGAG...GAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGAATTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TCACCAGAACACAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGATTAATGGAAGGGTGTTaGGGTGGCAGTTTTTATCCT +
Preference number: 4 (lower is better)
Translates to: SPEHKKPLRQCCSIHFYRLMEGC*GGSFYP
Trigger: AGGATAAAAACTGCCACCCCAACACCCTTCCATTAA...TCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp ACGATTCCAAACTATGAAACTGAAGAAGCACTCATCAAGAGATCATCTGTTCCCGGCACACTTCACAAGTaGATTTCTTTAACCAAGGAC +
Preference number: 4 (lower is better)
Translates to: TIPNYETEEALIKRSSVPGTLHK*ISLTKD
Trigger: GTCCTTGGTTAAAGAAATCCACTTGTGAAGTGTGCC...GGGAACAGATGATCTCTTGATGAGTGCTTCTTCAGTTTCATAGTTTGGAATCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp TCACCAGAACACAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGAATAATCAGGCTTGAATaGCTTTTCCTGGAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: SPEHKKPLRQCCSIHFYRIIRLE*LFLEEG
Trigger: ACCTTCCTCCAGGAAAAGCCATTCAAGCCTGATTAT...TCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp ACGATTCCAAACTATGAAACTGAAGAAGCACTCATCAAGAGATCATCTGTTCCCATAATCAGGCTTGAATaGCTTTTCCTGGAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: TIPNYETEEALIKRSSVPIIRLE*LFLEEG
Trigger: ACCTTCCTCCAGGAAAAGCCATTCAAGCCTGATTAT...GGGAACAGATGATCTCTTGATGAGTGCTTCTTCAGTTTCATAGTTTGGAATCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp AGTGAACGATTCCAAACTATGAAACTGAAGAAGCACTCATCAAGAGATCATCTGCCACTGAGCTTGCTGTaGGCTTTACAATACAATCTT +
Preference number: 4 (lower is better)
Translates to: SERFQTMKLKKHSSRDHLPLSLL*ALQYNL
Trigger: AAGATTGTATTGTAAAGCTCACAGCAAGCTCAGTGG...CAGATGATCTCTTGATGAGTGCTTCTTCAGTTTCATAGTTTGGAATCGTTCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp CTAGATTTTTCAGAGATGCTACATAGAAAAAGGGTGACGGAGAAAGCAACCACTCAAAGGCTACTTCATTaGGCTCCAACGATCTATATA +
Preference number: 4 (lower is better)
Translates to: LDFSEMLHRKRVTEKATTQRLLH*APTIYI
Trigger: TATATAGATCGTTGGAGCGCAATGAAGTAGCCTTTG...AGTGGTTGCTTTCTCCGTCACCCTTTTTCTATGTAGCATCTCTGAAAAATCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000547956.1
CDS-3UTR GCA 90 bp ACGATTCCAAACTATGAAACTGAAGAAGCACTCATCAAGAGATCATCTGTTCCCCCTTTGAGACAGTGTTaGAGTATTCACTTCTACAGA +
Preference number: 4 (lower is better)
Translates to: TIPNYETEEALIKRSSVPPLRQC*SIHFYR
Trigger: TCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGG...GGGAACAGATGATCTCTTGATGAGTGCTTCTTCAGTTTCATAGTTTGGAATCGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TCACCAGAACACAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGACATTACATGTCCATATaGCATACTGAGCATGCTCAT +
Preference number: 4 (lower is better)
Translates to: SPEHKKPLRQCCSIHFYRHYMSI*HTEHAH
Trigger: ATGAGCATGCTCAGTATGGCATATGGACATGTAATG...TCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp GTCCCTTGCAAAGATGACTCTAAGTGCAATAGCAACCTACTTATTTCTAGCAGACATTACATGTCCATATaGCATACTGAGCATGCTCAT +
Preference number: 4 (lower is better)
Translates to: VPCKDDSKCNSNLLISSRHYMSI*HTEHAH
Trigger: ATGAGCATGCTCAGTATGGCATATGGACATGTAATG...TCTGCTAGAAATAAGTAGGTTGCTATTGCACTTAGAGTCATCTTTGCAAGGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
3UTR CAA 72 bp AAACCTCATGTCAAGTCCATGAATAATATCAGGGGTTaGCTAATTGTCGAGCTGGATGCTCTATGTCACATA +
Preference number: 4 (lower is better)
Translates to: KPHVKSMNNIRG*LIVELDALCHI
Trigger: TATGTGACATAGAGCATCCAGCTCGACAATTAGCAAACCCCTGATATTATTCATGGACTTGACATGAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR TCA 90 bp GCAAGCAAAGCAGGAATCATAGATTTCTTCTGGAAAGATGTTAGAATTTTGCTGCTGGAGGAAGGTTCATaGACATTTTCACGCTTTTGT +
Preference number: 4 (lower is better)
Translates to: ASKAGIIDFFWKDVRILLLEEGS*TFSRFC
Trigger: ACAAAAGCGTGAAAATGTTCATGAACCTTCCTCCAG...CAGCAAAATTCTAACATCTTTCCAGAAGAAATCTATGATTCCTGCTTTGCTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp AGTGAACGATTCCAAACTATGAAACTGAAGAAGCACTCATCAAGAGATCATCTGTCTGAGCTGATGTTCTaGAAGAATTCTGTGGTCATT +
Preference number: 4 (lower is better)
Translates to: SERFQTMKLKKHSSRDHLSELMF*KNSVVI
Trigger: AATGACCACAGAATTCTTCCAGAACATCAGCTCAGA...CAGATGATCTCTTGATGAGTGCTTCTTCAGTTTCATAGTTTGGAATCGTTCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp GCAAGCAAAGCAGGAATCATAGATTTCTTCTGGAAAGATGTTAGAATTTTGCTGCAAAGGCTACTTCATTaGGCTCCAACGATCTATATA +
Preference number: 4 (lower is better)
Translates to: ASKAGIIDFFWKDVRILLQRLLH*APTIYI
Trigger: TATATAGATCGTTGGAGCGCAATGAAGTAGCCTTTG...CAGCAAAATTCTAACATCTTTCCAGAAGAAATCTATGATTCCTGCTTTGCTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp TGGAATTCACCAGAACACAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCCTGTGTTCTGTAGAATaGGTATTAGAAAATGTTGGA +
Preference number: 4 (lower is better)
Translates to: WNSPEHKKPLRQCCSIHFLCSVE*VLENVG
Trigger: TCCAACATTTTCTAATACGCATTCTACAGAACACAG...GAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGAATTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp ACGATTCCAAACTATGAAACTGAAGAAGCACTCATCAAGAGATCATCTGTTCCCCTTTTGTTGGCAATGTaGAATTCAGCTTTCTTTAAC +
Preference number: 4 (lower is better)
Translates to: TIPNYETEEALIKRSSVPLLLAM*NSAFFN
Trigger: GTTAAAGAAAGCTGAATTCCACATTGCCAACAAAAG...GGGAACAGATGATCTCTTGATGAGTGCTTCTTCAGTTTCATAGTTTGGAATCGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR GCA 90 bp GCAAGCAAAGCAGGAATCATAGATTTCTTCTGGAAAGATGTTAGAATTTTGCTGATAAAGTACCTCTGTTaGTATAAACCAGATGGAGAC +
Preference number: 4 (lower is better)
Translates to: ASKAGIIDFFWKDVRILLIKYLC*YKPDGD
Trigger: GTCTCCATCTGGTTTATAGCAACAGAGGTACTTTAT...CAGCAAAATTCTAACATCTTTCCAGAAGAAATCTATGATTCCTGCTTTGCTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CCA 90 bp GCAAGCAAAGCAGGAATCATAGATTTCTTCTGGAAAGATGTTAGAATTTTGCTGCTTTTGTTGGCAATGTaGAATTCAGCTTTCTTTAAC +
Preference number: 4 (lower is better)
Translates to: ASKAGIIDFFWKDVRILLLLLAM*NSAFFN
Trigger: GTTAAAGAAAGCTGAATTCCACATTGCCAACAAAAG...CAGCAAAATTCTAACATCTTTCCAGAAGAAATCTATGATTCCTGCTTTGCTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS GCA 90 bp GGTCTGGAAGTGCTGAGATGCGTGGACCCGCTGGCTGCGCGCTCCTaGTCCTCCTCCTCGCCGCTCCGCCGCCTCCTCCGATCCCGCCGG +
Preference number: 5 (lower is better)
Translates to: GLEVLRCVDPLAARS*SSSSPLRRLLRSRR
Trigger: CCGGCGGGATCGGAGGAGGCGGCGGAGCGGCGAGGAGGAGGAGCAGGAGCGCGCAGCCAGCGGGTCCACGCATCTCAGCACTTCCAGACC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303694.6
ENST00000546689.1
ENST00000547956.1
ENST00000549260.5
CDS GCA 90 bp TGCCGGAGTTGGTCTGGAAGTGCTGAGATGCGTGGACCCGCTGGCTaGGCGCTCCTGCTCCTCCTCCTCGCCGCTCCGCCGCCTCCTCCG +
Preference number: 5 (lower is better)
Translates to: CRSWSGSAEMRGPAG*ALLLLLLAAPPPPP
Trigger: CGGAGGAGGCGGCGGAGCGGCGAGGAGGAGGAGCAGGAGCGCGCAGCCAGCGGGTCCACGCATCTCAGCACTTCCAGACCAACTCCGGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303694.6
ENST00000546689.1
ENST00000547956.1
ENST00000549260.5
CDS TCA 90 bp GCCCGGGCAGGGGTGTGGAAGGTGCCGGAGTTGGTCTGGAAGTGCTaGGATGCGTGGACCCGCTGGCTGCGCGCTCCTGCTCCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: ARAGVWKVPELVWKC*DAWTRWLRAPAPPP
Trigger: AGGAGGAGGAGCAGGAGCGCGCAGCCAGCGGGTCCACGCATCTCAGCACTTCCAGACCAACTCCGGCACCTTCCACACCCCTGCCCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303694.6
ENST00000546689.1
ENST00000547956.1
ENST00000549260.5
CDS CCA 90 bp GGTCGTTGGGGGTCAGCACCCTCCGCTTACGGCTTGTGGCGCTGTTaGCTCGGCACGTGTCTGTCACCTGGTCCCGCCGCATCTGGTGCA +
Preference number: 5 (lower is better)
Translates to: GRWGSAPSAYGLWRC*LGTCLSPGPAASGA
Trigger: TGCACCAGATGCGGCGGGACCAGGTGACAGACACGTGCCGAGCCAACAGCGCCACAAGCCGTAAGCGGAGGGTGCTGACCCCCAACGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303694.6
ENST00000549016.1
ENST00000549260.5
CDS CCA 90 bp AGTGCTTCAGGTCGTTGGGGGTCAGCACCCTCCGCTTACGGCTTGTaGCGCTGTTGGCTCGGCACGTGTCTGTCACCTGGTCCCGCCGCA +
Preference number: 5 (lower is better)
Translates to: SASGRWGSAPSAYGL*RCWLGTCLSPGPAA
Trigger: TGCGGCGGGACCAGGTGACAGACACGTGCCGAGCCAACAGCGCCACAAGCCGTAAGCGGAGGGTGCTGACCCCCAACGACCTGAAGCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303694.6
ENST00000549016.1
ENST00000549260.5
CDS CCA 90 bp CGCTTACGGCTTGTGGCGCTGTTGGCTCGGCACGTGTCTGTCACCTaGTCCCGCCGCATCTGGTGCAGGACAGCAGTGTTTGAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: RLRLVALLARHVSVT*SRRIWCRTAVFESS
Trigger: GGAGCTCTCAAACACTGCTGTCCTGCACCAGATGCGGCGGGACCAGGTGACAGACACGTGCCGAGCCAACAGCGCCACAAGCCGTAAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303694.6
ENST00000549016.1
ENST00000549260.5
CDS CCA 90 bp TGTACTGGTTCAGGGTCTTCAGGTTGGCGGAGACGTGTGCCTCGTTaGCCGGGATCTCCATGGGGTCGCTGTACTTCCCCCGCCCGGTCA +
Preference number: 5 (lower is better)
Translates to: CTGSGSSGWRRRVPR*PGSPWGRCTSPARS
Trigger: TGACCGGGCGGGGGAAGTACAGCGACCCCATGGAGATCCCGGCCAACGAGGCACACGTCTCCGCCAACCTGAAGACCCTGAACCAGTACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303694.6
ENST00000549016.1
ENST00000549260.5
CDS GCA 90 bp TGGGATGCTGTACTGGTTCAGGGTCTTCAGGTTGGCGGAGACGTGTaGCTCGTTGGCCGGGATCTCCATGGGGTCGCTGTACTTCCCCCG +
Preference number: 5 (lower is better)
Translates to: WDAVLVQGLQVGGDV*LVGRDLHGVAVLPP
Trigger: CGGGGGAAGTACAGCGACCCCATGGAGATCCCGGCCAACGAGGCACACGTCTCCGCCAACCTGAAGACCCTGAACCAGTACAGCATCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303694.6
ENST00000549016.1
ENST00000549260.5
CDS CCA 90 bp GCGCTGTTGGCTCGGCACGTGTCTGTCACCTGGTCCCGCCGCATCTaGTGCAGGACAGCAGTGTTTGAGAGCTCCAGCTGGATTGGGTTG +
Preference number: 5 (lower is better)
Translates to: ALLARHVSVTWSRRI*CRTAVFESSSWIGL
Trigger: CAACCCAATCCAGCTGGAGCTCTCAAACACTGCTGTCCTGCACCAGATGCGGCGGGACCAGGTGACAGACACGTGCCGAGCCAACAGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303694.6
ENST00000549016.1
ENST00000549260.5
CDS-3UTR CAA 90 bp GGAGTAGGGAGCCACCCTGGGCCCTATACCCCACTCACCCTCTCCTCTCTTCCTTTCCCCGGTGAGATGTaGCAGCTGCTGCCCACTGAG +
Preference number: 5 (lower is better)
Translates to: GVGSHPGPYTPLTLSSLPFPGEM*QLLPTE
Trigger: CTCAGTGGGCAGCAGCTGCAACATCTCACCGGGGAA...AGGAAGAGAGGAGAGGGTGAGTGGGGTATAGGGCCCAGGGTGGCTCCCTACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS CCA 90 bp ACATCGTCCCCTTTGCGCAGGGCCTCCTGGGTGGCGTTCTTCCGCTaGCGTTTGATGATCTTGGTGCCGTACCGCTTGTGGAAGGAGATG +
Preference number: 5 (lower is better)
Translates to: TSSPLRRASWVAFFR*RLMILVPYRLWKEM
Trigger: CATCTCCTTCCACAAGCGGTACGGCACCAAGATCATCAAACGCCAGCGGAAGAACGCCACCCAGGAGGCCCTGCGCAAAGGGGACGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp TTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCACTGCCTGCTGCTCTCCTGAGACGTGTGCCTCGTaGGCCGGGATCTCCATGGGG +
Preference number: 5 (lower is better)
Translates to: FATRRTSATEVSTACCSPETCAS*AGISMG
Trigger: CCCCATGGAGATCCCGGCCAACGAGGCACACGTCTC...AGGAGAGCAGCAGGCAGTGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS CCA 90 bp ACAAACTCCTCGAATTTGACATCGTCCCCTTTGCGCAGGGCCTCCTaGGTGGCGTTCTTCCGCTGGCGTTTGATGATCTTGGTGCCGTAC +
Preference number: 5 (lower is better)
Translates to: TNSSNLTSSPLRRAS*VAFFRWRLMILVPY
Trigger: GTACGGCACCAAGATCATCAAACGCCAGCGGAAGAACGCCACCCAGGAGGCCCTGCGCAAAGGGGACGATGTCAAATTCGAGGAGTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp CCATTGCTCGAACTTGAGACTGTTAATCTCAGGAGTTCAAACCCTGGGCAGGTCGCTGGCTTCATGGCTTaGTCCTGGCTGCGGGGACCG +
Preference number: 5 (lower is better)
Translates to: PLLELETVNLRSSNPGQVAGFMA*SWLRGP
Trigger: CGGTCCCCGCAGCCAGGACAAAGCCATGAAGCCAGC...GACCTGCCCAGGGTTTGAACTCCTGAGATTAACAGTCTCAAGTTCGAGCAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547956.1
CDS-3UTR CAA 90 bp TTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCACTGCCTGCTGCTCTCCTTTCAGGGTCTTCAGGTaGGCGGAGACGTGTGCCTCG +
Preference number: 5 (lower is better)
Translates to: FATRRTSATEVSTACCSPFRVFR*AETCAS
Trigger: CGAGGCACACGTCTCCGCCAACCTGAAGACCCTGAA...AGGAGAGCAGCAGGCAGTGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp GGAGTAGGGAGCCACCCTGGGCCCTATACCCCACTCACCCTCTCCTCTCTTCCTCTTTTCAAGCGGTGGTaGATTTCTGGGATGCTGTAC +
Preference number: 5 (lower is better)
Translates to: GVGSHPGPYTPLTLSSLPLFKRW*ISGMLY
Trigger: GTACAGCATCCCAGAAATCAACCACCGCTTGAAAAG...AGGAAGAGAGGAGAGGGTGAGTGGGGTATAGGGCCCAGGGTGGCTCCCTACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp ATTCACTTCTACAGACAAGGACGACCCATCCTATTTCCCCTGCAAAGACAGCTGCGGCTTGTGGCGCTGTaGGCTCGGCACGTGTCTGTC +
Preference number: 5 (lower is better)
Translates to: IHFYRQGRPILFPLQRQLRLVAL*ARHVSV
Trigger: GACAGACACGTGCCGAGCCAACAGCGCCACAAGCCG...CAGCTGTCTTTGCAGGGGAAATAGGATGGGTCGTCCTTGTCTGTAGAAGTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp TTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCACTGCCTGCTGCTCTCCTGTTTGCCAGTGTTCGTaGAAAGGCTCCTCCCGCTGG +
Preference number: 5 (lower is better)
Translates to: FATRRTSATEVSTACCSPVCQCS*KGSSRW
Trigger: CCAGCGGGAGGAGCCTTTCAACGAACACTGGCAAAC...AGGAGAGCAGCAGGCAGTGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp CCCCTGTGCTTCATGCCTTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCACCACCAGCCAAGCATTaGTGGGACCCGCACACTTTG +
Preference number: 5 (lower is better)
Translates to: PLCFMPLPPGEPVQLKFPPPAKH*WDPHTL
Trigger: CAAAGTGTGCGGGTCCCACAAATGCTTGGCTGGTGG...TGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAAGGCATGAAGCACAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS CCA 90 bp GACGGTTTGCCAGTGTTCGTTGAAAGGCTCCTCCCGCTGGGTGTGTaGGTCGATGAGATAGGCCACAAACTCCTCGAATTTGACATCGTC +
Preference number: 5 (lower is better)
Translates to: DGLPVFVERLLPLGV*VDEIGHKLLEFDIV
Trigger: GACGATGTCAAATTCGAGGAGTTTGTGGCCTATCTCATCGACCCACACACCCAGCGGGAGGAGCCTTTCAACGAACACTGGCAAACCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTTTGACATCGTCCCCTTaGCGCAGGGCCTCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: CYQPRVKRILEGLVACRVLTSSP*RRASWV
Trigger: CACCCAGGAGGCCCTGCGCAAAGGGGACGATGTCAA...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp GCCTGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTTGCCAGTGTTCGTaGAAAGGCTCCTCCCGCTGG +
Preference number: 5 (lower is better)
Translates to: ACYQPRVKRILEGLVACRVCQCS*KGSSRW
Trigger: CCAGCGGGAGGAGCCTTTCAACGAACACTGGCAAAC...CCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS GCA 90 bp GGCTGTCCGACGGGCCCTCTCCCTTCTCTCCAAAGGCTACTTCATTaGGCTCCAACGATCTATATATTCCGGGGCTGGGTTTTACCAAAT +
Preference number: 5 (lower is better)
Translates to: GCPTGPLPSLQRLLH*APTIYIFRGWVLPN
Trigger: ATTTGGTAAAACCCAGCCCCGGAATATATAGATCGTTGGAGCGCAATGAAGTAGCCTTTGGAGAGAAGGGAGAGGGCCCGTCGGACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303694.6
CDS-3UTR CAA 90 bp GTGTTGGGGTGGCAGTTTTTATCCTTGAAGACCTCAGATATGCTAAGTCAACCTGCTGGCTTCATGGCTTaGTCCTGGCTGCGGGGACCG +
Preference number: 5 (lower is better)
Translates to: VLGWQFLSLKTSDMLSQPAGFMA*SWLRGP
Trigger: CGGTCCCCGCAGCCAGGACAAAGCCATGAAGCCAGC...AGGTTGACTTAGCATATCTGAGGTCTTCAAGGATAAAAACTGCCACCCCAACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp CAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGACAAGGACGACCCGGCTTGTGGCGCTGTaGGCTCGGCACGTGTCTGTC +
Preference number: 5 (lower is better)
Translates to: QETFETVLQYSLLQTRTTRLVAL*ARHVSV
Trigger: GACAGACACGTGCCGAGCCAACAGCGCCACAAGCCG...GGTCGTCCTTGTCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp GCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTCAAACTTCAACTGAGAAGTGCTTCAGGTCGTaGGGGGTCAGCACCCTCCGC +
Preference number: 5 (lower is better)
Translates to: ATNSFTSCKRDVAQTSTEKCFRS*GVSTLR
Trigger: GCGGAGGGTGCTGACCCCCAACGACCTGAAGCACTT...CTCAGTTGAAGTTTGAGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp GCCTGTAGGGTTCTAACTGGTTGTGATGGAAAAAGGTTGGAGGAAATGCTGGTGTTCAGGGTCTTCAGGTaGGCGGAGACGTGTGCCTCG +
Preference number: 5 (lower is better)
Translates to: ACRVLTGCDGKRLEEMLVFRVFR*AETCAS
Trigger: CGAGGCACACGTCTCCGCCAACCTGAAGACCCTGAA...CACCAGCATTTCCTCCAACCTTTTTCCATCACAACCAGTTAGAACCCTACAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS GCA 90 bp CGTAGACTTTGCATAGGTGGGGAACTTCAGGTAGCTGCCCACTCCTaGCAGCTGCAGGACGTAATTAGAATCCTCTTCCAGTGTCTCGTA +
Preference number: 5 (lower is better)
Translates to: RRLCIGGELQVAAHS*QLQDVIRILFQCLV
Trigger: TACGAGACACTGGAAGAGGATTCTAATTACGTCCTGCAGCTGGCAGGAGTGGGCAGCTACCTGAAGTTCCCCACCTATGCAAAGTCTACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp TCACCAGAACACAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGACCCTCCGCTTACGGCTaGTGGCGCTGTTGGCTCGGC +
Preference number: 5 (lower is better)
Translates to: SPEHKKPLRQCCSIHFYRPSAYG*WRCWLG
Trigger: GCCGAGCCAACAGCGCCACAAGCCGTAAGCGGAGGG...TCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp GTCCCTTGCAAAGATGACTCTAAGTGCAATAGCAACCTACTTATTTCTAGCAGACCCTCCGCTTACGGCTaGTGGCGCTGTTGGCTCGGC +
Preference number: 5 (lower is better)
Translates to: VPCKDDSKCNSNLLISSRPSAYG*WRCWLG
Trigger: GCCGAGCCAACAGCGCCACAAGCCGTAAGCGGAGGG...TCTGCTAGAAATAAGTAGGTTGCTATTGCACTTAGAGTCATCTTTGCAAGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp TGCCTGGAGAATCCATTCTGGGGCTTAAAGGCAGACATTACCCATCAGTTGGAGTGGCGTTTGATGATCTaGGTGCCGTACCGCTTGTGG +
Preference number: 5 (lower is better)
Translates to: CLENPFWGLKADITHQLEWRLMI*VPYRLW
Trigger: CCACAAGCGGTACGGCACCAAGATCATCAAACGCCA...CTCCAACTGATGGGTAATGTCTGCCTTTAAGCCCCAGAATGGATTCTCCAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp CAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGACAAGGACGACCTTGACATCGTCCCCTTaGCGCAGGGCCTCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: QETFETVLQYSLLQTRTTLTSSP*RRASWV
Trigger: CACCCAGGAGGCCCTGCGCAAAGGGGACGATGTCAA...GGTCGTCCTTGTCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp TGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGTTGCAGGACAGCAGTGTTaGAGAGCTCCAGCTGGATTG +
Preference number: 5 (lower is better)
Translates to: CYQPRVKRILEGLVACRVAGQQC*RAPAGL
Trigger: CAATCCAGCTGGAGCTCTCAAACACTGCTGTCCTGC...AACCCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp GTCCCTTGCAAAGATGACTCTAAGTGCAATAGCAACCTACTTATTTCTAGCAGAGAGACGTGTGCCTCGTaGGCCGGGATCTCCATGGGG +
Preference number: 5 (lower is better)
Translates to: VPCKDDSKCNSNLLISSRETCAS*AGISMG
Trigger: CCCCATGGAGATCCCGGCCAACGAGGCACACGTCTC...TCTGCTAGAAATAAGTAGGTTGCTATTGCACTTAGAGTCATCTTTGCAAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp TGCCTGGAGAATCCATTCTGGGGCTTAAAGGCAGACATTACCCATCAGTTGGAGTTGGTGCCGTACCGCTaGTGGAAGGAGATGTTGTAC +
Preference number: 5 (lower is better)
Translates to: CLENPFWGLKADITHQLELVPYR*WKEMLY
Trigger: GTACAACATCTCCTTCCACAAGCGGTACGGCACCAA...CTCCAACTGATGGGTAATGTCTGCCTTTAAGCCCCAGAATGGATTCTCCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp TGTGGTGCTAGGCTGAATGGAGATGACAGTAGGAGGCACTTGAGGAGTGTTCCCCTTGGCATTTCACACTaGTACGTGGCAAGCAGTAGA +
Preference number: 5 (lower is better)
Translates to: CGARLNGDDSRRHLRSVPLGISH*YVASSR
Trigger: TCTACTGCTTGCCACGTACAAGTGTGAAATGCCAAG...GGGAACACTCCTCAAGTGCCTCCTACTGTCATCTCCATTCAGCCTAGCACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp CCCCTGTGCTTCATGCCTTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCACTTGGCATTTCACACTaGTACGTGGCAAGCAGTAGA +
Preference number: 5 (lower is better)
Translates to: PLCFMPLPPGEPVQLKFPLGISH*YVASSR
Trigger: TCTACTGCTTGCCACGTACAAGTGTGAAATGCCAAG...TGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAAGGCATGAAGCACAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp TGCCTGGAGAATCCATTCTGGGGCTTAAAGGCAGACATTACCCATCAGTTGGAGTATGGAAGGCTGTCCTaGCTGCTCATGCATGGCAGT +
Preference number: 5 (lower is better)
Translates to: CLENPFWGLKADITHQLEYGRLS*LLMHGS
Trigger: ACTGCCATGCATGAGCAGCAAGGACAGCCTTCCATA...CTCCAACTGATGGGTAATGTCTGCCTTTAAGCCCCAGAATGGATTCTCCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp GCCTGTAGGGTTCTAACTGGTTGTGATGGAAAAAGGTTGGAGGAAATGCTGGTGCCACTGAGCATCCTTTaGAGCCTGAGGAGTAGGGAG +
Preference number: 5 (lower is better)
Translates to: ACRVLTGCDGKRLEEMLVPLSIL*SLRSRE
Trigger: CTCCCTACTCCTCAGGCTCAAAAGGATGCTCAGTGG...CACCAGCATTTCCTCCAACCTTTTTCCATCACAACCAGTTAGAACCCTACAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp ATTCACTTCTACAGACAAGGACGACCCATCCTATTTCCCCTGCAAAGACAGCTGCTGTGCTTCATGCCTTaGCCACCAGGAGAACCAGTG +
Preference number: 5 (lower is better)
Translates to: IHFYRQGRPILFPLQRQLLCFMP*PPGEPV
Trigger: CACTGGTTCTCCTGGTGGCAAAGGCATGAAGCACAG...CAGCTGTCTTTGCAGGGGAAATAGGATGGGTCGTCCTTGTCTGTAGAAGTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS TCA 90 bp CAAGGAAGCCAGGCTGAACAAGCTTCAGACAGAGTCGTTCTCCAGTaGTTCTTCTGCTCTGGTGATAGGAGATCAGGAATGGGAGTTGCA +
Preference number: 5 (lower is better)
Translates to: QGSQAEQASDRVVLQ*FFCSGDRRSGMGVA
Trigger: TGCAACTCCCATTCCTGATCTCCTATCACCAGAGCAGAAGAATCACTGGAGAACGACTCTGTCTGAAGCTTGTTCAGCCTGGCTTCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550711.1
CDS CCA 90 bp GACAAACAGGAACTTCATGTAGCTTTTCAAGCGGTGGTTGATTTCTaGGATGCTGTACTGGTTCAGGGTCTTCAGGTTGGCGGAGACGTG +
Preference number: 5 (lower is better)
Translates to: DKQELHVAFQAVVDF*DAVLVQGLQVGGDV
Trigger: CACGTCTCCGCCAACCTGAAGACCCTGAACCAGTACAGCATCCCAGAAATCAACCACCGCTTGAAAAGCTACATGAAGTTCCTGTTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303694.6
ENST00000549016.1
ENST00000549260.5
CDS-3UTR CAA 90 bp TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGGAGGACTGGCTACTTTTCAAGCGGTGGTaGATTTCTGGGATGCTGTAC +
Preference number: 5 (lower is better)
Translates to: LCVCVCVCVCVCVGEDWLLFKRW*ISGMLY
Trigger: GTACAGCATCCCAGAAATCAACCACCGCTTGAAAAG...TAGCCAGTCCTCCCCTACACACACACACACACACACACACACACACACACACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp TGCCAACTCTATCTCAGCACTGATCCAGACCCCACCAGCCAAGCATTTGTGGGATTGTGGAAGGAGATGTaGTACTTCTGGGTGAACTTG +
Preference number: 5 (lower is better)
Translates to: CQLYLSTDPDPTSQAFVGLWKEM*YFWVNL
Trigger: CAAGTTCACCCAGAAGTACAACATCTCCTTCCACAA...TCCCACAAATGCTTGGCTGGTGGGGTCTGGATCAGTGCTGAGATAGAGTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp ATTCACTTCTACAGACAAGGACGACCCATCCTATTTCCCCTGCAAAGACAGCTGTTGGTGCCGTACCGCTaGTGGAAGGAGATGTTGTAC +
Preference number: 5 (lower is better)
Translates to: IHFYRQGRPILFPLQRQLLVPYR*WKEMLY
Trigger: GTACAACATCTCCTTCCACAAGCGGTACGGCACCAA...CAGCTGTCTTTGCAGGGGAAATAGGATGGGTCGTCCTTGTCTGTAGAAGTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp GCCTGTAGGGTTCTAACTGGTTGTGATGGAAAAAGGTTGGAGGAAATGCTGGTGTATGGAAGGCTGTCCTaGCTGCTCATGCATGGCAGT +
Preference number: 5 (lower is better)
Translates to: ACRVLTGCDGKRLEEMLVYGRLS*LLMHGS
Trigger: ACTGCCATGCATGAGCAGCAAGGACAGCCTTCCATA...CACCAGCATTTCCTCCAACCTTTTTCCATCACAACCAGTTAGAACCCTACAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGGAGGACTGGCTACATGCACAGCACACATaGAAGGCTGAAAAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: LCVCVCVCVCVCVGEDWLHAQHT*KAEKSL
Trigger: CAAGGACTTTTCAGCCTTCAATGTGTGCTGTGCATG...TAGCCAGTCCTCCCCTACACACACACACACACACACACACACACACACACACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp GCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTCAAACTTCAACTGAGCTGTGCTTCATGCCTTaGCCACCAGGAGAACCAGTG +
Preference number: 5 (lower is better)
Translates to: ATNSFTSCKRDVAQTSTELCFMP*PPGEPV
Trigger: CACTGGTTCTCCTGGTGGCAAAGGCATGAAGCACAG...CTCAGTTGAAGTTTGAGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp CAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGACAAGGACGACCGCAGGACAGCAGTGTTaGAGAGCTCCAGCTGGATTG +
Preference number: 5 (lower is better)
Translates to: QETFETVLQYSLLQTRTTAGQQC*RAPAGL
Trigger: CAATCCAGCTGGAGCTCTCAAACACTGCTGTCCTGC...GGTCGTCCTTGTCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp TTAAGAGAGAGAAGCCAGATGAAAGGCCATCTTCACATGACAGTGAGCAGGCTTTTCTTCCGCTGGCGTTaGATGATCTTGGTGCCGTAC +
Preference number: 5 (lower is better)
Translates to: LRERSQMKGHLHMTVSRLFFRWR*MILVPY
Trigger: GTACGGCACCAAGATCATCAAACGCCAGCGGAAGAA...AAGCCTGCTCACTGTCATGTGAAGATGGCCTTTCATCTGGCTTCTCTCTCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp GCCTGTAGGGTTCTAACTGGTTGTGATGGAAAAAGGTTGGAGGAAATGCTGGTGACAAACTCCTCGAATTaGACATCGTCCCCTTTGCGC +
Preference number: 5 (lower is better)
Translates to: ACRVLTGCDGKRLEEMLVTNSSN*TSSPLR
Trigger: GCGCAAAGGGGACGATGTCAAATTCGAGGAGTTTGT...CACCAGCATTTCCTCCAACCTTTTTCCATCACAACCAGTTAGAACCCTACAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp GCCTGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGATGGACCTTCTGCTGTaGCTCATGAATAGTCCAAAC +
Preference number: 5 (lower is better)
Translates to: ACYQPRVKRILEGLVACRMDLLL*LMNSPN
Trigger: GTTTGGACTATTCATGAGCAACAGCAGAAGGTCCAT...CCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp CCCCTGTGCTTCATGCCTTTGCCACCAGGAGAACCAGTGCAACTGAAGTTTCCAACTCAAGGATTATTTTaGGGGATTCACCATGCACAG +
Preference number: 5 (lower is better)
Translates to: PLCFMPLPPGEPVQLKFPTQGLF*GIHHAQ
Trigger: CTGTGCATGGTGAATCCCCAAAAATAATCCTTGAGT...TGGAAACTTCAGTTGCACTGGTTCTCCTGGTGGCAAAGGCATGAAGCACAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp GCCTGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGCATTCCAGAAACCTATaGATGTCATGTCCCCTGAAG +
Preference number: 5 (lower is better)
Translates to: ACYQPRVKRILEGLVACRHSRNL*MSCPLK
Trigger: CTTCAGGGGACATGACATCAATAGGTTTCTGGAATG...CCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp TGCCTGGAGAATCCATTCTGGGGCTTAAAGGCAGACATTACCCATCAGTTGGAGCCAAAGGCTACTTCATaGCGCTCCAACGATCTATAT +
Preference number: 5 (lower is better)
Translates to: CLENPFWGLKADITHQLEPKATS*RSNDLY
Trigger: ATATAGATCGTTGGAGCGCAATGAAGTAGCCTTTGG...CTCCAACTGATGGGTAATGTCTGCCTTTAAGCCCCAGAATGGATTCTCCAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp GCAAGCAAAGCAGGAATCATAGATTTCTTCTGGAAAGATGTTAGAATTTTGCTGAAGTGCTTCAGGTCGTaGGGGGTCAGCACCCTCCGC +
Preference number: 5 (lower is better)
Translates to: ASKAGIIDFFWKDVRILLKCFRS*GVSTLR
Trigger: GCGGAGGGTGCTGACCCCCAACGACCTGAAGCACTT...CAGCAAAATTCTAACATCTTTCCAGAAGAAATCTATGATTCCTGCTTTGCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp GCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTCAAACTTCAACTGAGACAAACTCCTCGAATTaGACATCGTCCCCTTTGCGC +
Preference number: 5 (lower is better)
Translates to: ATNSFTSCKRDVAQTSTETNSSN*TSSPLR
Trigger: GCGCAAAGGGGACGATGTCAAATTCGAGGAGTTTGT...CTCAGTTGAAGTTTGAGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp TGCCTGGAGAATCCATTCTGGGGCTTAAAGGCAGACATTACCCATCAGTTGGAGGGACTTTCAGGTCGATaGGAATTGGTTTGGAATGAG +
Preference number: 5 (lower is better)
Translates to: CLENPFWGLKADITHQLEGLSGR*ELVWNE
Trigger: CTCATTCCAAACCAATTCCAATCGACCTGAAAGTCC...CTCCAACTGATGGGTAATGTCTGCCTTTAAGCCCCAGAATGGATTCTCCAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp GCCTGTAGGGTTCTAACTGGTTGTGATGGAAAAAGGTTGGAGGAAATGCTGGTGCATGCACAGCACACATaGAAGGCTGAAAAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: ACRVLTGCDGKRLEEMLVHAQHT*KAEKSL
Trigger: CAAGGACTTTTCAGCCTTCAATGTGTGCTGTGCATG...CACCAGCATTTCCTCCAACCTTTTTCCATCACAACCAGTTAGAACCCTACAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp TTATATACAGTAGCTGCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTCCACTGAGCATCCTTTaGAGCCTGAGGAGTAGGGAG +
Preference number: 5 (lower is better)
Translates to: LYTVAATNSFTSCKRDVAPLSIL*SLRSRE
Trigger: CTCCCTACTCCTCAGGCTCAAAAGGATGCTCAGTGG...AGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGCAGCTACTGTATATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp TGTGGTGCTAGGCTGAATGGAGATGACAGTAGGAGGCACTTGAGGAGTGTTCCCATTTTCACGCTTTTGTaGGCAATGTGGAATTCAGCT +
Preference number: 5 (lower is better)
Translates to: CGARLNGDDSRRHLRSVPIFTLL*AMWNSA
Trigger: AGCTGAATTCCACATTGCCAACAAAAGCGTGAAAAT...GGGAACACTCCTCAAGTGCCTCCTACTGTCATCTCCATTCAGCCTAGCACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp GGAGTTCAAACCCTGGGCAGGTCTGAATGCTTAGCACTAAACCTAGGCATTTCTCCAAAGGCTACTTCATaGCGCTCCAACGATCTATAT +
Preference number: 5 (lower is better)
Translates to: GVQTLGRSECLALNLGISPKATS*RSNDLY
Trigger: ATATAGATCGTTGGAGCGCAATGAAGTAGCCTTTGG...AGAAATGCCTAGGTTTAGTGCTAAGCATTCAGACCTGCCCAGGGTTTGAACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547956.1
CDS-3UTR CAA 90 bp AAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACGTGGCAAGCCAAAGGCTACTTCATaGCGCTCCAACGATCTATAT +
Preference number: 5 (lower is better)
Translates to: KSPSVRVSPWHFTLVRGKPKATS*RSNDLY
Trigger: ATATAGATCGTTGGAGCGCAATGAAGTAGCCTTTGG...CTTGCCACGTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp ACGATTCCAAACTATGAAACTGAAGAAGCACTCATCAAGAGATCATCTGTTCCCTGGCGTTTGATGATCTaGGTGCCGTACCGCTTGTGG +
Preference number: 5 (lower is better)
Translates to: TIPNYETEEALIKRSSVPWRLMI*VPYRLW
Trigger: CCACAAGCGGTACGGCACCAAGATCATCAAACGCCA...GGGAACAGATGATCTCTTGATGAGTGCTTCTTCAGTTTCATAGTTTGGAATCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp TTATATACAGTAGCTGCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTTTCTTCCGCTGGCGTTaGATGATCTTGGTGCCGTAC +
Preference number: 5 (lower is better)
Translates to: LYTVAATNSFTSCKRDVAFFRWR*MILVPY
Trigger: GTACGGCACCAAGATCATCAAACGCCAGCGGAAGAA...AGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGCAGCTACTGTATATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp GCCTGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGGAACACAAGAAACCTTaGAGACAGTGTTGCAGTATT +
Preference number: 5 (lower is better)
Translates to: ACYQPRVKRILEGLVACREHKKP*RQCCSI
Trigger: AATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTC...CCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp GCCTGTTATCAGCCAAGGGTTAAGCGGATTCTAGAAGGCCTTGTTGCCTGTAGGTGGCAGTTTTTATCCTaGAAGACCTCAGATATGCTA +
Preference number: 5 (lower is better)
Translates to: ACYQPRVKRILEGLVACRWQFLS*KTSDML
Trigger: TAGCATATCTGAGGTCTTCAAGGATAAAAACTGCCA...CCTACAGGCAACAAGGCCTTCTAGAATCCGCTTAACCCTTGGCTGATAACAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp AAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACGTGGCAAGTTTAATGGAAGGGTGTaGGGGTGGCAGTTTTTATCC +
Preference number: 5 (lower is better)
Translates to: KSPSVRVSPWHFTLVRGKFNGRV*GWQFLS
Trigger: GGATAAAAACTGCCACCCCAACACCCTTCCATTAAA...CTTGCCACGTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp TTATATACAGTAGCTGCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTATTTGGTCACTGGGATaGCACAGAATGGCGCAGCTG +
Preference number: 5 (lower is better)
Translates to: LYTVAATNSFTSCKRDVAIWSLG*HRMAQL
Trigger: CAGCTGCGCCATTCTGTGCAATCCCAGTGACCAAAT...AGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGCAGCTACTGTATATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp TGTGGTGCTAGGCTGAATGGAGATGACAGTAGGAGGCACTTGAGGAGTGTTCCCAACATTTTCACGCTTTaGTTGGCAATGTGGAATTCA +
Preference number: 5 (lower is better)
Translates to: CGARLNGDDSRRHLRSVPNIFTL*LAMWNS
Trigger: TGAATTCCACATTGCCAACAAAAGCGTGAAAATGTT...GGGAACACTCCTCAAGTGCCTCCTACTGTCATCTCCATTCAGCCTAGCACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp AACTTGAGACTGTTAATCTCAGGAGTTCAAACCCTGGGCAGGTCTGAATGCTTAATGCTGACAGAGTGCTaGAAGCTTACCTGGATTGGG +
Preference number: 5 (lower is better)
Translates to: NLRLLISGVQTLGRSECLMLTEC*KLTWIG
Trigger: CCCAATCCAGGTAAGCTTCAAGCACTCTGTCAGCAT...TAAGCATTCAGACCTGCCCAGGGTTTGAACTCCTGAGATTAACAGTCTCAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547956.1
CDS-3UTR CAA 90 bp GGAGTTCAAACCCTGGGCAGGTCTGAATGCTTAGCACTAAACCTAGGCATTTCTTCCCATTGCTCGAACTaGAGACTGTTAATCTCAGGA +
Preference number: 5 (lower is better)
Translates to: GVQTLGRSECLALNLGISSHCSN*RLLISG
Trigger: TCCTGAGATTAACAGTCTCAAGTTCGAGCAATGGGA...AGAAATGCCTAGGTTTAGTGCTAAGCATTCAGACCTGCCCAGGGTTTGAACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547956.1
CDS-3UTR CAA 90 bp ACCATTGCAAATCCCCAAGTGTACGAGTCTCACCTTGGCATTTCACACTTGTACTTGTGGAAGGAGATGTaGTACTTCTGGGTGAACTTG +
Preference number: 5 (lower is better)
Translates to: TIANPQVYESHLGISHLYLWKEM*YFWVNL
Trigger: CAAGTTCACCCAGAAGTACAACATCTCCTTCCACAA...GTACAAGTGTGAAATGCCAAGGTGAGACTCGTACACTTGGGGATTTGCAATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp GCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTCAAACTTCAACTGAGATGGACCTTCTGCTGTaGCTCATGAATAGTCCAAAC +
Preference number: 5 (lower is better)
Translates to: ATNSFTSCKRDVAQTSTEMDLLL*LMNSPN
Trigger: GTTTGGACTATTCATGAGCAACAGCAGAAGGTCCAT...CTCAGTTGAAGTTTGAGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp GCAAGCAAAGCAGGAATCATAGATTTCTTCTGGAAAGATGTTAGAATTTTGCTGCCACCAGCCAAGCATTaGTGGGACCCGCACACTTTG +
Preference number: 5 (lower is better)
Translates to: ASKAGIIDFFWKDVRILLPPAKH*WDPHTL
Trigger: CAAAGTGTGCGGGTCCCACAAATGCTTGGCTGGTGG...CAGCAAAATTCTAACATCTTTCCAGAAGAAATCTATGATTCCTGCTTTGCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp TGGAATTCACCAGAACACAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCATTTGGTCACTGGGATaGCACAGAATGGCGCAGCTG +
Preference number: 5 (lower is better)
Translates to: WNSPEHKKPLRQCCSIHFIWSLG*HRMAQL
Trigger: CAGCTGCGCCATTCTGTGCAATCCCAGTGACCAAAT...GAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGAATTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp GTGTTGGGGTGGCAGTTTTTATCCTTGAAGACCTCAGATATGCTAAGTCAACCTTGTGATGGAAAAAGGTaGGAGGAAATGCTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: VLGWQFLSLKTSDMLSQPCDGKR*EEMLVV
Trigger: CACCACCAGCATTTCCTCCAACCTTTTTCCATCACA...AGGTTGACTTAGCATATCTGAGGTCTTCAAGGATAAAAACTGCCACCCCAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp CAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGACAAGGACGACCTCAGGTCGATTGGAATaGGTTTGGAATGAGTCCCTT +
Preference number: 5 (lower is better)
Translates to: QETFETVLQYSLLQTRTTSGRLE*VWNESL
Trigger: AAGGGACTCATTCCAAACCAATTCCAATCGACCTGA...GGTCGTCCTTGTCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp CAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGACAAGGACGACCTTAGCATCTTTTCTGTaGGTCAGTGAGCTTGGGATC +
Preference number: 5 (lower is better)
Translates to: QETFETVLQYSLLQTRTTLASFL*VSELGI
Trigger: GATCCCAAGCTCACTGACCAACAGAAAAGATGCTAA...GGTCGTCCTTGTCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp GTGTTGGGGTGGCAGTTTTTATCCTTGAAGACCTCAGATATGCTAAGTCAACCTACTCAAGGATTATTTTaGGGGATTCACCATGCACAG +
Preference number: 5 (lower is better)
Translates to: VLGWQFLSLKTSDMLSQPTQGLF*GIHHAQ
Trigger: CTGTGCATGGTGAATCCCCAAAAATAATCCTTGAGT...AGGTTGACTTAGCATATCTGAGGTCTTCAAGGATAAAAACTGCCACCCCAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp TCACCAGAACACAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGATGTGATGGAAAAAGGTaGGAGGAAATGCTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: SPEHKKPLRQCCSIHFYRCDGKR*EEMLVV
Trigger: CACCACCAGCATTTCCTCCAACCTTTTTCCATCACA...TCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp CAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGACAAGGACGACCGAACACAAGAAACCTTaGAGACAGTGTTGCAGTATT +
Preference number: 5 (lower is better)
Translates to: QETFETVLQYSLLQTRTTEHKKP*RQCCSI
Trigger: AATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTC...GGTCGTCCTTGTCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp TCACCAGAACACAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCTACAGATCAGGTCGATTGGAATaGGTTTGGAATGAGTCCCTT +
Preference number: 5 (lower is better)
Translates to: SPEHKKPLRQCCSIHFYRSGRLE*VWNESL
Trigger: AAGGGACTCATTCCAAACCAATTCCAATCGACCTGA...TCTGTAGAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp GTCCCTTGCAAAGATGACTCTAAGTGCAATAGCAACCTACTTATTTCTAGCAGAGGACTTTCAGGTCGATaGGAATTGGTTTGGAATGAG +
Preference number: 5 (lower is better)
Translates to: VPCKDDSKCNSNLLISSRGLSGR*ELVWNE
Trigger: CTCATTCCAAACCAATTCCAATCGACCTGAAAGTCC...TCTGCTAGAAATAAGTAGGTTGCTATTGCACTTAGAGTCATCTTTGCAAGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp ACGATTCCAAACTATGAAACTGAAGAAGCACTCATCAAGAGATCATCTGTTCCCTTTAATGGAAGGGTGTaGGGGTGGCAGTTTTTATCC +
Preference number: 5 (lower is better)
Translates to: TIPNYETEEALIKRSSVPFNGRV*GWQFLS
Trigger: GGATAAAAACTGCCACCCCAACACCCTTCCATTAAA...GGGAACAGATGATCTCTTGATGAGTGCTTCTTCAGTTTCATAGTTTGGAATCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp TTATATACAGTAGCTGCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTATTTTCACGCTTTTGTaGGCAATGTGGAATTCAGCT +
Preference number: 5 (lower is better)
Translates to: LYTVAATNSFTSCKRDVAIFTLL*AMWNSA
Trigger: AGCTGAATTCCACATTGCCAACAAAAGCGTGAAAAT...AGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGCAGCTACTGTATATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp TGGAATTCACCAGAACACAAGAAACCTTTGAGACAGTGTTGCAGTATTCACTTCATTCCTCCGCATGATTaGGAAATAGAAGATGACCAG +
Preference number: 5 (lower is better)
Translates to: WNSPEHKKPLRQCCSIHFIPPHD*EIEDDQ
Trigger: CTGGTCATCTTCTATTTCCAAATCATGCGGAGGAAT...GAAGTGAATACTGCAACACTGTCTCAAAGGTTTCTTGTGTTCTGGTGAATTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549260.5
CDS-3UTR CAA 90 bp GTCCCTTGCAAAGATGACTCTAAGTGCAATAGCAACCTACTTATTTCTAGCAGATGGCAGTTTTTATCCTaGAAGACCTCAGATATGCTA +
Preference number: 5 (lower is better)
Translates to: VPCKDDSKCNSNLLISSRWQFLS*KTSDML
Trigger: TAGCATATCTGAGGTCTTCAAGGATAAAAACTGCCA...TCTGCTAGAAATAAGTAGGTTGCTATTGCACTTAGAGTCATCTTTGCAAGGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp GCAAGCAAAGCAGGAATCATAGATTTCTTCTGGAAAGATGTTAGAATTTTGCTGCATTCCAGAAACCTATaGATGTCATGTCCCCTGAAG +
Preference number: 5 (lower is better)
Translates to: ASKAGIIDFFWKDVRILLHSRNL*MSCPLK
Trigger: CTTCAGGGGACATGACATCAATAGGTTTCTGGAATG...CAGCAAAATTCTAACATCTTTCCAGAAGAAATCTATGATTCCTGCTTTGCTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS-3UTR CAA 90 bp TTATATACAGTAGCTGCTACCAACTCATTCACTAGCTGTAAGAGGGATGTGGCTAACATTTTCACGCTTTaGTTGGCAATGTGGAATTCA +
Preference number: 5 (lower is better)
Translates to: LYTVAATNSFTSCKRDVANIFTL*LAMWNS
Trigger: TGAATTCCACATTGCCAACAAAAGCGTGAAAATGTT...AGCCACATCCCTCTTACAGCTAGTGAATGAGTTGGTAGCAGCTACTGTATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS GCA 72 bp GTGCTGAGATGCGTGGACCCGCTGGCTGCGCGCTCCTaGTCCTCCTCCTCGCCGCTCCGCCGCCTCCTCCGA +
Preference number: 6 (lower is better)
Translates to: VLRCVDPLAARS*SSSSPLRRLLR
Trigger: TCGGAGGAGGCGGCGGAGCGGCGAGGAGGAGGAGCAGGAGCGCGCAGCCAGCGGGTCCACGCATCTCAGCAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303694.6
ENST00000546689.1
ENST00000547956.1
ENST00000549260.5
CDS CAA 72 bp GGGGTCAGCACCCTCCGCTTACGGCTTGTGGCGCTGTaGGCTCGGCACGTGTCTGTCACCTGGTCCCGCCGC +
Preference number: 6 (lower is better)
Translates to: GVSTLRLRLVAL*ARHVSVTWSRR
Trigger: GCGGCGGGACCAGGTGACAGACACGTGCCGAGCCAACAGCGCCACAAGCCGTAAGCGGAGGGTGCTGACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303694.6
ENST00000549016.1
ENST00000549260.5
CDS CCA 72 bp GGGTCAGCACCCTCCGCTTACGGCTTGTGGCGCTGTTaGCTCGGCACGTGTCTGTCACCTGGTCCCGCCGCA +
Preference number: 6 (lower is better)
Translates to: GSAPSAYGLWRC*LGTCLSPGPAA
Trigger: TGCGGCGGGACCAGGTGACAGACACGTGCCGAGCCAACAGCGCCACAAGCCGTAAGCGGAGGGTGCTGACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303694.6
ENST00000549016.1
ENST00000549260.5
CDS CCA 72 bp TGGCGGAGACGTGTGCCTCGTTGGCCGGGATCTCCATaGGGTCGCTGTACTTCCCCCGCCCGGTCAGGACCA +
Preference number: 6 (lower is better)
Translates to: WRRRVPRWPGSP*GRCTSPARSGP
Trigger: TGGTCCTGACCGGGCGGGGGAAGTACAGCGACCCCATGGAGATCCCGGCCAACGAGGCACACGTCTCCGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303694.6
ENST00000549016.1
ENST00000549260.5
CDS CAA 90 bp AGGTCGTTGGGGGTCAGCACCCTCCGCTTACGGCTTGTGGCGCTGTaGGCTCGGCACGTGTCTGTCACCTGGTCCCGCCGCATCTGGTGC +
Preference number: 6 (lower is better)
Translates to: RSLGVSTLRLRLVAL*ARHVSVTWSRRIWC
Trigger: GCACCAGATGCGGCGGGACCAGGTGACAGACACGTGCCGAGCCAACAGCGCCACAAGCCGTAAGCGGAGGGTGCTGACCCCCAACGACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303694.6
ENST00000549016.1
ENST00000549260.5
CDS TCA 72 bp GGGGTGTGGAAGGTGCCGGAGTTGGTCTGGAAGTGCTaGGATGCGTGGACCCGCTGGCTGCGCGCTCCTGCT +
Preference number: 6 (lower is better)
Translates to: GVWKVPELVWKC*DAWTRWLRAPA
Trigger: AGCAGGAGCGCGCAGCCAGCGGGTCCACGCATCTCAGCACTTCCAGACCAACTCCGGCACCTTCCACACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303694.6
ENST00000546689.1
ENST00000547956.1
ENST00000549260.5
CDS GCA 72 bp GTGGAAGGTGCCGGAGTTGGTCTGGAAGTGCTGAGATaGGTGGACCCGCTGGCTGCGCGCTCCTGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: VEGAGVGLEVLR*VDPLAARSCSS
Trigger: GGAGGAGCAGGAGCGCGCAGCCAGCGGGTCCACGCATCTCAGCACTTCCAGACCAACTCCGGCACCTTCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303694.6
ENST00000546689.1
ENST00000547956.1
ENST00000549260.5
CDS CAA 90 bp CCAAGTGCTTCAGGTCGTTGGGGGTCAGCACCCTCCGCTTACGGCTaGTGGCGCTGTTGGCTCGGCACGTGTCTGTCACCTGGTCCCGCC +
Preference number: 6 (lower is better)
Translates to: PSASGRWGSAPSAYG*WRCWLGTCLSPGPA
Trigger: GGCGGGACCAGGTGACAGACACGTGCCGAGCCAACAGCGCCACAAGCCGTAAGCGGAGGGTGCTGACCCCCAACGACCTGAAGCACTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303694.6
ENST00000549016.1
ENST00000549260.5
CDS CCA 72 bp GGTCGTTGGGGGTCAGCACCCTCCGCTTACGGCTTGTaGCGCTGTTGGCTCGGCACGTGTCTGTCACCTGGT +
Preference number: 6 (lower is better)
Translates to: GRWGSAPSAYGL*RCWLGTCLSPG
Trigger: ACCAGGTGACAGACACGTGCCGAGCCAACAGCGCCACAAGCCGTAAGCGGAGGGTGCTGACCCCCAACGACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303694.6
ENST00000549016.1
ENST00000549260.5
CDS CAA 90 bp CTGTACTGGTTCAGGGTCTTCAGGTTGGCGGAGACGTGTGCCTCGTaGGCCGGGATCTCCATGGGGTCGCTGTACTTCCCCCGCCCGGTC +
Preference number: 6 (lower is better)
Translates to: LYWFRVFRLAETCAS*AGISMGSLYFPRPV
Trigger: GACCGGGCGGGGGAAGTACAGCGACCCCATGGAGATCCCGGCCAACGAGGCACACGTCTCCGCCAACCTGAAGACCCTGAACCAGTACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303694.6
ENST00000549016.1
ENST00000549260.5
CDS CCA 72 bp GCTCGGCACGTGTCTGTCACCTGGTCCCGCCGCATCTaGTGCAGGACAGCAGTGTTTGAGAGCTCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: ARHVSVTWSRRI*CRTAVFESSSW
Trigger: CCAGCTGGAGCTCTCAAACACTGCTGTCCTGCACCAGATGCGGCGGGACCAGGTGACAGACACGTGCCGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303694.6
ENST00000549016.1
ENST00000549260.5
CDS CCA 72 bp CGTGGTCCTCATCCACCACCAAGTGCTTCAGGTCGTTaGGGGTCAGCACCCTCCGCTTACGGCTTGTGGCGC +
Preference number: 6 (lower is better)
Translates to: RGPHPPPSASGR*GSAPSAYGLWR
Trigger: GCGCCACAAGCCGTAAGCGGAGGGTGCTGACCCCCAACGACCTGAAGCACTTGGTGGTGGATGAGGACCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303694.6
ENST00000549016.1
ENST00000549260.5
CDS CCA 72 bp TCAGGGTCTTCAGGTTGGCGGAGACGTGTGCCTCGTTaGCCGGGATCTCCATGGGGTCGCTGTACTTCCCCC +
Preference number: 6 (lower is better)
Translates to: SGSSGWRRRVPR*PGSPWGRCTSP
Trigger: GGGGGAAGTACAGCGACCCCATGGAGATCCCGGCCAACGAGGCACACGTCTCCGCCAACCTGAAGACCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303694.6
ENST00000549016.1
ENST00000549260.5
CDS CAA 72 bp TCAGGTCGTTGGGGGTCAGCACCCTCCGCTTACGGCTaGTGGCGCTGTTGGCTCGGCACGTGTCTGTCACCT +
Preference number: 6 (lower is better)
Translates to: SGRWGSAPSAYG*WRCWLGTCLSP
Trigger: AGGTGACAGACACGTGCCGAGCCAACAGCGCCACAAGCCGTAAGCGGAGGGTGCTGACCCCCAACGACCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303694.6
ENST00000549016.1
ENST00000549260.5
CDS CCA 72 bp CTTGTGGCGCTGTTGGCTCGGCACGTGTCTGTCACCTaGTCCCGCCGCATCTGGTGCAGGACAGCAGTGTTT +
Preference number: 6 (lower is better)
Translates to: LVALLARHVSVT*SRRIWCRTAVF
Trigger: AAACACTGCTGTCCTGCACCAGATGCGGCGGGACCAGGTGACAGACACGTGCCGAGCCAACAGCGCCACAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303694.6
ENST00000549016.1
ENST00000549260.5
CDS CCA 72 bp CCTTTGCGCAGGGCCTCCTGGGTGGCGTTCTTCCGCTaGCGTTTGATGATCTTGGTGCCGTACCGCTTGTGG +
Preference number: 6 (lower is better)
Translates to: PLRRASWVAFFR*RLMILVPYRLW
Trigger: CCACAAGCGGTACGGCACCAAGATCATCAAACGCCAGCGGAAGAACGCCACCCAGGAGGCCCTGCGCAAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS CAA 72 bp TCGTGGTCCTCATCCACCACCAAGTGCTTCAGGTCGTaGGGGGTCAGCACCCTCCGCTTACGGCTTGTGGCG +
Preference number: 6 (lower is better)
Translates to: SWSSSTTKCFRS*GVSTLRLRLVA
Trigger: CGCCACAAGCCGTAAGCGGAGGGTGCTGACCCCCAACGACCTGAAGCACTTGGTGGTGGATGAGGACCACGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303694.6
ENST00000549016.1
ENST00000549260.5
CDS CAA 72 bp TTCAGGGTCTTCAGGTTGGCGGAGACGTGTGCCTCGTaGGCCGGGATCTCCATGGGGTCGCTGTACTTCCCC +
Preference number: 6 (lower is better)
Translates to: FRVFRLAETCAS*AGISMGSLYFP
Trigger: GGGGAAGTACAGCGACCCCATGGAGATCCCGGCCAACGAGGCACACGTCTCCGCCAACCTGAAGACCCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303694.6
ENST00000549016.1
ENST00000549260.5
CDS CAA 72 bp CGCAGGGCCTCCTGGGTGGCGTTCTTCCGCTGGCGTTaGATGATCTTGGTGCCGTACCGCTTGTGGAAGGAG +
Preference number: 6 (lower is better)
Translates to: RRASWVAFFRWR*MILVPYRLWKE
Trigger: CTCCTTCCACAAGCGGTACGGCACCAAGATCATCAAACGCCAGCGGAAGAACGCCACCCAGGAGGCCCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS GCA 72 bp CGGCACGTGTCTGTCACCTGGTCCCGCCGCATCTGGTaGAGGACAGCAGTGTTTGAGAGCTCCAGCTGGATT +
Preference number: 6 (lower is better)
Translates to: RHVSVTWSRRIW*RTAVFESSSWI
Trigger: AATCCAGCTGGAGCTCTCAAACACTGCTGTCCTGCACCAGATGCGGCGGGACCAGGTGACAGACACGTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303694.6
ENST00000549016.1
ENST00000549260.5
CDS GCA 72 bp GTACTGGTTCAGGGTCTTCAGGTTGGCGGAGACGTGTaGCTCGTTGGCCGGGATCTCCATGGGGTCGCTGTA +
Preference number: 6 (lower is better)
Translates to: VLVQGLQVGGDV*LVGRDLHGVAV
Trigger: TACAGCGACCCCATGGAGATCCCGGCCAACGAGGCACACGTCTCCGCCAACCTGAAGACCCTGAACCAGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303694.6
ENST00000549016.1
ENST00000549260.5
CDS CAA 90 bp CGGTGGTTGATTTCTGGGATGCTGTACTGGTTCAGGGTCTTCAGGTaGGCGGAGACGTGTGCCTCGTTGGCCGGGATCTCCATGGGGTCG +
Preference number: 6 (lower is better)
Translates to: RWLISGMLYWFRVFR*AETCASLAGISMGS
Trigger: CGACCCCATGGAGATCCCGGCCAACGAGGCACACGTCTCCGCCAACCTGAAGACCCTGAACCAGTACAGCATCCCAGAAATCAACCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303694.6
ENST00000549016.1
ENST00000549260.5
CDS CAA 90 bp CGCAGGGCCTCCTGGGTGGCGTTCTTCCGCTGGCGTTTGATGATCTaGGTGCCGTACCGCTTGTGGAAGGAGATGTTGTACTTCTGGGTG +
Preference number: 6 (lower is better)
Translates to: RRASWVAFFRWRLMI*VPYRLWKEMLYFWV
Trigger: CACCCAGAAGTACAACATCTCCTTCCACAAGCGGTACGGCACCAAGATCATCAAACGCCAGCGGAAGAACGCCACCCAGGAGGCCCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS CAA 90 bp TCCCCTTTGCGCAGGGCCTCCTGGGTGGCGTTCTTCCGCTGGCGTTaGATGATCTTGGTGCCGTACCGCTTGTGGAAGGAGATGTTGTAC +
Preference number: 6 (lower is better)
Translates to: SPLRRASWVAFFRWR*MILVPYRLWKEMLY
Trigger: GTACAACATCTCCTTCCACAAGCGGTACGGCACCAAGATCATCAAACGCCAGCGGAAGAACGCCACCCAGGAGGCCCTGCGCAAAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS CCA 72 bp TTTCTGGGATGCTGTACTGGTTCAGGGTCTTCAGGTTaGCGGAGACGTGTGCCTCGTTGGCCGGGATCTCCA +
Preference number: 6 (lower is better)
Translates to: FLGCCTGSGSSG*RRRVPRWPGSP
Trigger: TGGAGATCCCGGCCAACGAGGCACACGTCTCCGCCAACCTGAAGACCCTGAACCAGTACAGCATCCCAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303694.6
ENST00000549016.1
ENST00000549260.5
CDS CAA 72 bp ATTTCTGGGATGCTGTACTGGTTCAGGGTCTTCAGGTaGGCGGAGACGTGTGCCTCGTTGGCCGGGATCTCC +
Preference number: 6 (lower is better)
Translates to: ISGMLYWFRVFR*AETCASLAGIS
Trigger: GGAGATCCCGGCCAACGAGGCACACGTCTCCGCCAACCTGAAGACCCTGAACCAGTACAGCATCCCAGAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303694.6
ENST00000549016.1
ENST00000549260.5
CDS CCA 72 bp TCGAATTTGACATCGTCCCCTTTGCGCAGGGCCTCCTaGGTGGCGTTCTTCCGCTGGCGTTTGATGATCTTG +
Preference number: 6 (lower is better)
Translates to: SNLTSSPLRRAS*VAFFRWRLMIL
Trigger: CAAGATCATCAAACGCCAGCGGAAGAACGCCACCCAGGAGGCCCTGCGCAAAGGGGACGATGTCAAATTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS CAA 72 bp TCCTGGGTGGCGTTCTTCCGCTGGCGTTTGATGATCTaGGTGCCGTACCGCTTGTGGAAGGAGATGTTGTAC +
Preference number: 6 (lower is better)
Translates to: SWVAFFRWRLMI*VPYRLWKEMLY
Trigger: GTACAACATCTCCTTCCACAAGCGGTACGGCACCAAGATCATCAAACGCCAGCGGAAGAACGCCACCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS TCA 72 bp CGTACCGCTTGTGGAAGGAGATGTTGTACTTCTGGGTaGACTTGTTGCGGTAGGCGGACACTAGCCTCTCGA +
Preference number: 6 (lower is better)
Translates to: RTACGRRCCTSG*TCCGRRTLASR
Trigger: TCGAGAGGCTAGTGTCCGCCTACCGCAACAAGTTCACCCAGAAGTACAACATCTCCTTCCACAAGCGGTACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS CCA 72 bp CTTTTCAAGCGGTGGTTGATTTCTGGGATGCTGTACTaGTTCAGGGTCTTCAGGTTGGCGGAGACGTGTGCC +
Preference number: 6 (lower is better)
Translates to: LFKRWLISGMLY*FRVFRLAETCA
Trigger: GGCACACGTCTCCGCCAACCTGAAGACCCTGAACCAGTACAGCATCCCAGAAATCAACCACCGCTTGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303694.6
ENST00000549016.1
ENST00000549260.5
CDS CCA 72 bp CCAGTGTTCGTTGAAAGGCTCCTCCCGCTGGGTGTGTaGGTCGATGAGATAGGCCACAAACTCCTCGAATTT +
Preference number: 6 (lower is better)
Translates to: PVFVERLLPLGV*VDEIGHKLLEF
Trigger: AAATTCGAGGAGTTTGTGGCCTATCTCATCGACCCACACACCCAGCGGGAGGAGCCTTTCAACGAACACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS CAA 90 bp TGGCTGTCCGACGGGCCCTCTCCCTTCTCTCCAAAGGCTACTTCATaGCGCTCCAACGATCTATATATTCCGGGGCTGGGTTTTACCAAA +
Preference number: 6 (lower is better)
Translates to: WLSDGPSPFSPKATS*RSNDLYIPGLGFTK
Trigger: TTTGGTAAAACCCAGCCCCGGAATATATAGATCGTTGGAGCGCAATGAAGTAGCCTTTGGAGAGAAGGGAGAGGGCCCGTCGGACAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303694.6
CDS CCA 72 bp CGCTGGCGTTTGATGATCTTGGTGCCGTACCGCTTGTaGAAGGAGATGTTGTACTTCTGGGTGAACTTGTTG +
Preference number: 6 (lower is better)
Translates to: RWRLMILVPYRL*KEMLYFWVNLL
Trigger: CAACAAGTTCACCCAGAAGTACAACATCTCCTTCCACAAGCGGTACGGCACCAAGATCATCAAACGCCAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS CAA 72 bp TTCCGCTGGCGTTTGATGATCTTGGTGCCGTACCGCTaGTGGAAGGAGATGTTGTACTTCTGGGTGAACTTG +
Preference number: 6 (lower is better)
Translates to: FRWRLMILVPYR*WKEMLYFWVNL
Trigger: CAAGTTCACCCAGAAGTACAACATCTCCTTCCACAAGCGGTACGGCACCAAGATCATCAAACGCCAGCGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5
CDS GCA 72 bp ACCTCCCCACCATCATCACTAAGAAAGGGGATTCCTTaGAGAGGGCATGGCTTAGATGGGCATTTGCACAAA +
Preference number: 6 (lower is better)
Translates to: TSPPSSLRKGIP*RGHGLDGHLHK
Trigger: TTTGTGCAAATGCCCATCTAAGCCATGCCCTCTGCAAGGAATCCCCTTTCTTAGTGATGATGGTGGGGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550711.1
CDS CCA 72 bp GAACTTCATGTAGCTTTTCAAGCGGTGGTTGATTTCTaGGATGCTGTACTGGTTCAGGGTCTTCAGGTTGGC +
Preference number: 6 (lower is better)
Translates to: ELHVAFQAVVDF*DAVLVQGLQVG
Trigger: GCCAACCTGAAGACCCTGAACCAGTACAGCATCCCAGAAATCAACCACCGCTTGAAAAGCTACATGAAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303694.6
ENST00000549016.1
ENST00000549260.5
CDS TCA 72 bp CAAACAGGAACTTCATGTAGCTTTTCAAGCGGTGGTTaGTTTCTGGGATGCTGTACTGGTTCAGGGTCTTCA +
Preference number: 6 (lower is better)
Translates to: QTGTSCSFSSGG*FLGCCTGSGSS
Trigger: TGAAGACCCTGAACCAGTACAGCATCCCAGAAATCAACCACCGCTTGAAAAGCTACATGAAGTTCCTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303694.6
ENST00000549016.1
ENST00000549260.5
CDS TCA 72 bp TGTAGACTTCGTACAGCTGCGTTTGGTGCTCTGAGCTaGTGTTCTGGAAGAATTCTGTGGTCATTTCATCAG +
Preference number: 6 (lower is better)
Translates to: CRLRTAAFGALS*CSGRILWSFHQ
Trigger: CTGATGAAATGACCACAGAATTCTTCCAGAACATCAGCTCAGAGCACCAAACGCAGCTGTACGAAGTCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303694.6
ENST00000549260.5