RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHST10 (Homo sapiens)

Ensembl gene IDs: ENSG00000115526

Ensembl transcript IDs: ENST00000264249.8, ENST00000409046.5, ENST00000409701.5, ENST00000418201.5, ENST00000420858.5, ENST00000421474.5, ENST00000435960.5, ENST00000448989.5, ENST00000466583.1, ENST00000484382.5, ENST00000485085.5, ENST00000487860.1

Found 221 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACAGGCCTGTGGGAGACCCCGGGCGTCCTCAAAGGAGGGGTGTGGTaGAGGAAGGGTCATTTCTGGGCTCAGATCTTCACCTGGTTAGCC +
Preference number: 1 (lower is better)
Translates to: TGLWETPGVLKGGVW*RKGHFWAQIFTWLA
Trigger: GGCTAACCAGGTGAAGATCTGAGCCCAGAAATGACCCTTCCTCCACCACACCCCTCCTTTGAGGACGCCCGGGGTCTCCCACAGGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR CCA 90 bp CTCACAGGCCTGTGGGAGACCCCGGGCGTCCTCAAAGGAGGGGTGTaGTGGAGGAAGGGTCATTTCTGGGCTCAGATCTTCACCTGGTTA +
Preference number: 1 (lower is better)
Translates to: LTGLWETPGVLKGGV*WRKGHFWAQIFTWL
Trigger: TAACCAGGTGAAGATCTGAGCCCAGAAATGACCCTTCCTCCACCACACCCCTCCTTTGAGGACGCCCGGGGTCTCCCACAGGCCTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR TCA 90 bp AGGTGGAGATTCACTGCTGTCCACCCAGGTAAGGCAAGTCAGAACTaGTGCGCCGGGATCCACAGCAGCCTGAGCTCCAAGCCCAACCAG +
Preference number: 1 (lower is better)
Translates to: RWRFTAVHPGKASQN*CAGIHSSLSSKPNQ
Trigger: CTGGTTGGGCTTGGAGCTCAGGCTGCTGTGGATCCCGGCGCATCAGTTCTGACTTGCCTTACCTGGGTGGACAGCAGTGAATCTCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR TCA 90 bp CTGACTAGCCAGGAGAACCTCAGGGGCATCCCCTTCCTTAACACCTaGAGGAAACGGCTCCTAACGCTGTGTGATGCTTCCTCCCTGCTG +
Preference number: 1 (lower is better)
Translates to: LTSQENLRGIPFLNT*RKRLLTLCDASSLL
Trigger: CAGCAGGGAGGAAGCATCACACAGCGTTAGGAGCCGTTTCCTTCAGGTGTTAAGGAAGGGGATGCCCCTGAGGTTCTCCTGGCTAGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR CCA 90 bp TCAGAAGCATGGACCAGCATTACACAGGCATGGATTCTGGAAAGATaGACCCCTGGACACCACACCACCCTCTGGCCATCGCTGACTGTC +
Preference number: 1 (lower is better)
Translates to: SEAWTSITQAWILER*TPGHHTTLWPSLTV
Trigger: GACAGTCAGCGATGGCCAGAGGGTGGTGTGGTGTCCAGGGGTCCATCTTTCCAGAATCCATGCCTGTGTAATGCTGGTCCATGCTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR CCA 90 bp ACACAGGTTCAGAAGCATGGACCAGCATTACACAGGCATGGATTCTaGAAAGATGGACCCCTGGACACCACACCACCCTCTGGCCATCGC +
Preference number: 1 (lower is better)
Translates to: TQVQKHGPALHRHGF*KDGPLDTTPPSGHR
Trigger: GCGATGGCCAGAGGGTGGTGTGGTGTCCAGGGGTCCATCTTTCCAGAATCCATGCCTGTGTAATGCTGGTCCATGCTTCTGAACCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR CCA 90 bp ATGGACCAGCATTACACAGGCATGGATTCTGGAAAGATGGACCCCTaGACACCACACCACCCTCTGGCCATCGCTGACTGTCTACAGGAA +
Preference number: 1 (lower is better)
Translates to: MDQHYTGMDSGKMDP*TPHHPLAIADCLQE
Trigger: TTCCTGTAGACAGTCAGCGATGGCCAGAGGGTGGTGTGGTGTCCAGGGGTCCATCTTTCCAGAATCCATGCCTGTGTAATGCTGGTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR CCA 90 bp GCAGGGTCCTCAGAGCATCTTACATCCAAACTAAGTTGTAACAGTTaGGGTTCTGCGTCATATGCCGAGGCAACTCACAGGCCTGTGGGA +
Preference number: 1 (lower is better)
Translates to: AGSSEHLTSKLSCNS*GSASYAEATHRPVG
Trigger: TCCCACAGGCCTGTGAGTTGCCTCGGCATATGACGCAGAACCCCAACTGTTACAACTTAGTTTGGATGTAAGATGCTCTGAGGACCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR CCA 90 bp GCATGGATTCTGGAAAGATGGACCCCTGGACACCACACCACCCTCTaGCCATCGCTGACTGTCTACAGGAACAAAATAGTCACAGAAAGA +
Preference number: 1 (lower is better)
Translates to: AWILERWTPGHHTTL*PSLTVYRNKIVTER
Trigger: TCTTTCTGTGACTATTTTGTTCCTGTAGACAGTCAGCGATGGCCAGAGGGTGGTGTGGTGTCCAGGGGTCCATCTTTCCAGAATCCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR TCA 90 bp TCACAGAAAGAATGCTTTGCCTCCACAATTGTCGCAGCACCAAGATaGAGGCCAGAGGTGCCGTTTTACTCCTCAGATCTGATGCTGCAA +
Preference number: 1 (lower is better)
Translates to: SQKECFASTIVAAPR*RPEVPFYSSDLMLQ
Trigger: TTGCAGCATCAGATCTGAGGAGTAAAACGGCACCTCTGGCCTTCATCTTGGTGCTGCGACAATTGTGGAGGCAAAGCATTCTTTCTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR GCA 90 bp TCGCTGACTGTCTACAGGAACAAAATAGTCACAGAAAGAATGCTTTaGCTCCACAATTGTCGCAGCACCAAGATGAAGGCCAGAGGTGCC +
Preference number: 1 (lower is better)
Translates to: SLTVYRNKIVTERML*LHNCRSTKMKARGA
Trigger: GGCACCTCTGGCCTTCATCTTGGTGCTGCGACAATTGTGGAGGCAAAGCATTCTTTCTGTGACTATTTTGTTCCTGTAGACAGTCAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR-3UTR GCA 90 bp CCAGGGCCTACCTTGTTGCCAGGAAGCCGCACTGCTGGAGGCTACCTGGGCGCTGTGATGCTTCCTCCCTaGTGGGCTGTCAAACTGCAA +
Preference number: 2 (lower is better)
Translates to: PGPTLLPGSRTAGGYLGAVMLPP*WAVKLQ
Trigger: TTGCAGTTTGACAGCCCAGCAGGGAGGAAGCATCAC...AGCGCCCAGGTAGCCTCCAGCAGTGCGGCTTCCTGGCAACAAGGTAGGCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR-3UTR CCA 90 bp ATGGGTGAAGCCACCCTGACTAGCCAGGAGAACCTCAGGGGCATCCCCTTCCTTATGCACGCAGGGGTGTaGGCAGGGTCCTCAGAGCAT +
Preference number: 2 (lower is better)
Translates to: MGEATLTSQENLRGIPFLMHAGV*AGSSEH
Trigger: ATGCTCTGAGGACCCTGCCCACACCCCTGCGTGCAT...AAGGAAGGGGATGCCCCTGAGGTTCTCCTGGCTAGTCAGGGTGGCTTCACCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR CAA 90 bp GCCAGGAAGCCGCACTGCTGGAGGCTACCTGGGCGCTGGGTTTTATaGCTGGTGAACTTGGTTACCCACCTTCCAGTCACATGGTCCAGG +
Preference number: 2 (lower is better)
Translates to: ARKPHCWRLPGRWVL*LVNLVTHLPVTWSR
Trigger: CCTGGACCATGTGACTGGAAGGTGGGTAACCAAGTTCACCAGCAATAAAACCCAGCGCCCAGGTAGCCTCCAGCAGTGCGGCTTCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR-3UTR TCA 90 bp GAAGCCACCCTGACTAGCCAGGAGAACCTCAGGGGCATCCCCTTCCTTAACACCTTCTCCCCTCTGAGGTaGGCAAAGGCCAGCGACATC +
Preference number: 2 (lower is better)
Translates to: EATLTSQENLRGIPFLNTFSPLR*AKASDI
Trigger: GATGTCGCTGGCCTTTGCTCACCTCAGAGGGGAGAA...GGTGTTAAGGAAGGGGATGCCCCTGAGGTTCTCCTGGCTAGTCAGGGTGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR-3UTR TCA 90 bp CCCCAACATGGGAGCTCCCTGGAGAAGACAGGTGGAGATTCACTGCTGTCCACCTGGGTGAAGCCACCCTaGCTAGCCAGGAGAACCTCA +
Preference number: 2 (lower is better)
Translates to: PQHGSSLEKTGGDSLLSTWVKPP*LARRTS
Trigger: TGAGGTTCTCCTGGCTAGTCAGGGTGGCTTCACCCA...GGTGGACAGCAGTGAATCTCCACCTGTCTTCTCCAGGGAGCTCCCATGTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR-3UTR CCA 90 bp TGCCCCTGCTCGTCTTCAGCCCCAACATGGGAGCTCCCTGGAGAAGACAGGTGGCACAGGCATGGATTCTaGAAAGATGGACCCCTGGAC +
Preference number: 2 (lower is better)
Translates to: CPCSSSAPTWELPGEDRWHRHGF*KDGPLD
Trigger: GTCCAGGGGTCCATCTTTCCAGAATCCATGCCTGTG...CCACCTGTCTTCTCCAGGGAGCTCCCATGTTGGGGCTGAAGACGAGCAGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR-3UTR GCA 90 bp CCAGGGCCTACCTTGTTGCCAGGAAGCCGCACTGCTGGAGGCTACCTGGGCGCTACAGAAAGAATGCTTTaGCTCCACAATTGTCGCAGC +
Preference number: 2 (lower is better)
Translates to: PGPTLLPGSRTAGGYLGATERML*LHNCRS
Trigger: GCTGCGACAATTGTGGAGGCAAAGCATTCTTTCTGT...AGCGCCCAGGTAGCCTCCAGCAGTGCGGCTTCCTGGCAACAAGGTAGGCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR-3UTR GCA 90 bp TACACAGGCATGGATTCTGGAAAGATGGACCCCTGGACACCACACCACCCTCTGCCTGGGTGCTGTTCCTaGAACCCACCAGTGATGGGT +
Preference number: 2 (lower is better)
Translates to: YTGMDSGKMDPWTPHHPLPGCCS*NPPVMG
Trigger: ACCCATCACTGGTGGGTTGCAGGAACAGCACCCAGG...CAGAGGGTGGTGTGGTGTCCAGGGGTCCATCTTTCCAGAATCCATGCCTGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR-3UTR GCA 90 bp TACACAGGCATGGATTCTGGAAAGATGGACCCCTGGACACCACACCACCCTCTGCCTCAGAGTCCTGGGTaGTGTTCCTGCAACCCACCA +
Preference number: 2 (lower is better)
Translates to: YTGMDSGKMDPWTPHHPLPQSPG*CSCNPP
Trigger: TGGTGGGTTGCAGGAACAGCACCCAGGACTCTGAGG...CAGAGGGTGGTGTGGTGTCCAGGGGTCCATCTTTCCAGAATCCATGCCTGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR-3UTR CCA 90 bp CAGAGTCCTGGGTGCTGTTCCTGCAACCCACCAGTGATGGGTGAAGCCACCCTGAGGAAGGGTCATTTCTaGGCTCAGATCTTCACCTGG +
Preference number: 2 (lower is better)
Translates to: QSPGCCSCNPPVMGEATLRKGHF*AQIFTW
Trigger: CCAGGTGAAGATCTGAGCCCAGAAATGACCCTTCCT...CAGGGTGGCTTCACCCATCACTGGTGGGTTGCAGGAACAGCACCCAGGACTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR-3UTR CCA 90 bp CCCCAACATGGGAGCTCCCTGGAGAAGACAGGTGGAGATTCACTGCTGTCCACCCTCAAAGGAGGGGTGTaGTGGAGGAAGGGTCATTTC +
Preference number: 2 (lower is better)
Translates to: PQHGSSLEKTGGDSLLSTLKGGV*WRKGHF
Trigger: GAAATGACCCTTCCTCCACCACACCCCTCCTTTGAG...GGTGGACAGCAGTGAATCTCCACCTGTCTTCTCCAGGGAGCTCCCATGTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR-3UTR CCA 90 bp AGAAAGAATGCTTTGCCTCCACAATTGTCGCAGCACCAAGATGAAGGCCAGAGGCAACTCACAGGCCTGTaGGAGACCCCGGGCGTCCTC +
Preference number: 2 (lower is better)
Translates to: RKNALPPQLSQHQDEGQRQLTGL*ETPGVL
Trigger: GAGGACGCCCGGGGTCTCCCACAGGCCTGTGAGTTG...CCTCTGGCCTTCATCTTGGTGCTGCGACAATTGTGGAGGCAAAGCATTCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR-3UTR CCA 90 bp ACCTTGTTGCCAGGAAGCCGCACTGCTGGAGGCTACCTGGGCGCTGGGTTTTATCATGGTCCAGGATGGTaGTGTGATCAGAAATGGCTC +
Preference number: 2 (lower is better)
Translates to: TLLPGSRTAGGYLGAGFYHGPGW*CDQKWL
Trigger: GAGCCATTTCTGATCACACCACCATCCTGGACCATG...ATAAAACCCAGCGCCCAGGTAGCCTCCAGCAGTGCGGCTTCCTGGCAACAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR-3UTR TCA 90 bp CCCCAACATGGGAGCTCCCTGGAGAAGACAGGTGGAGATTCACTGCTGTCCACCATGTCTTGTGCTGAATaGAATAGGCGCTTGGCAGAC +
Preference number: 2 (lower is better)
Translates to: PQHGSSLEKTGGDSLLSTMSCAE*NRRLAD
Trigger: GTCTGCCAAGCGCCTATTTCATTCAGCACAAGACAT...GGTGGACAGCAGTGAATCTCCACCTGTCTTCTCCAGGGAGCTCCCATGTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR-3UTR CCA 90 bp GAAGCCACCCTGACTAGCCAGGAGAACCTCAGGGGCATCCCCTTCCTTAACACCCTAAGTTGTAACAGTTaGGGTTCTGCGTCATATGCC +
Preference number: 2 (lower is better)
Translates to: EATLTSQENLRGIPFLNTLSCNS*GSASYA
Trigger: GGCATATGACGCAGAACCCCAACTGTTACAACTTAG...GGTGTTAAGGAAGGGGATGCCCCTGAGGTTCTCCTGGCTAGTCAGGGTGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR-3UTR CCA 90 bp TACACAGGCATGGATTCTGGAAAGATGGACCCCTGGACACCACACCACCCTCTGATGCTTCCTCCCTGCTaGGCTGTCAAACTGCAAATC +
Preference number: 2 (lower is better)
Translates to: YTGMDSGKMDPWTPHHPLMLPPC*AVKLQI
Trigger: GATTTGCAGTTTGACAGCCCAGCAGGGAGGAAGCAT...CAGAGGGTGGTGTGGTGTCCAGGGGTCCATCTTTCCAGAATCCATGCCTGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR-3UTR GCA 90 bp ACCTTGTTGCCAGGAAGCCGCACTGCTGGAGGCTACCTGGGCGCTGGGTTTTATGCTGGGCTGTCAAACTaGAAATCTTTAGCCTTTTCT +
Preference number: 2 (lower is better)
Translates to: TLLPGSRTAGGYLGAGFYAGLSN*KSLAFS
Trigger: AGAAAAGGCTAAAGATTTGCAGTTTGACAGCCCAGC...ATAAAACCCAGCGCCCAGGTAGCCTCCAGCAGTGCGGCTTCCTGGCAACAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR-3UTR CCA 90 bp TACACAGGCATGGATTCTGGAAAGATGGACCCCTGGACACCACACCACCCTCTGGCTCAGATCTTCACCTaGTTAGCCCCAGGTCTAATA +
Preference number: 2 (lower is better)
Translates to: YTGMDSGKMDPWTPHHPLAQIFT*LAPGLI
Trigger: TATTAGACCTGGGGCTAACCAGGTGAAGATCTGAGC...CAGAGGGTGGTGTGGTGTCCAGGGGTCCATCTTTCCAGAATCCATGCCTGTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR CAA 90 bp ATCGCTGACTGTCTACAGGAACAAAATAGTCACAGAAAGAATGCTTaGCCTCCACAATTGTCGCAGCACCAAGATGAAGGCCAGAGGTGC +
Preference number: 2 (lower is better)
Translates to: IADCLQEQNSHRKNA*PPQLSQHQDEGQRC
Trigger: GCACCTCTGGCCTTCATCTTGGTGCTGCGACAATTGTGGAGGCAAAGCATTCTTTCTGTGACTATTTTGTTCCTGTAGACAGTCAGCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR CAA 90 bp CTACAGGAACAAAATAGTCACAGAAAGAATGCTTTGCCTCCACAATaGTCGCAGCACCAAGATGAAGGCCAGAGGTGCCGTTTTACTCCT +
Preference number: 2 (lower is better)
Translates to: LQEQNSHRKNALPPQ*SQHQDEGQRCRFTP
Trigger: AGGAGTAAAACGGCACCTCTGGCCTTCATCTTGGTGCTGCGACAATTGTGGAGGCAAAGCATTCTTTCTGTGACTATTTTGTTCCTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR CCA 72 bp TGGGAGACCCCGGGCGTCCTCAAAGGAGGGGTGTGGTaGAGGAAGGGTCATTTCTGGGCTCAGATCTTCACC +
Preference number: 3 (lower is better)
Translates to: WETPGVLKGGVW*RKGHFWAQIFT
Trigger: GGTGAAGATCTGAGCCCAGAAATGACCCTTCCTCCACCACACCCCTCCTTTGAGGACGCCCGGGGTCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR CCA 72 bp CTGTGGGAGACCCCGGGCGTCCTCAAAGGAGGGGTGTaGTGGAGGAAGGGTCATTTCTGGGCTCAGATCTTC +
Preference number: 3 (lower is better)
Translates to: LWETPGVLKGGV*WRKGHFWAQIF
Trigger: GAAGATCTGAGCCCAGAAATGACCCTTCCTCCACCACACCCCTCCTTTGAGGACGCCCGGGGTCTCCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR CCA 72 bp AGCCTGAGCTCCAAGCCCAACCAGCGCCCCCATTCCTaGGCCATGGTCCTTTTAAGGCCCTCAAAGACACTC +
Preference number: 3 (lower is better)
Translates to: SLSSKPNQRPHS*AMVLLRPSKTL
Trigger: GAGTGTCTTTGAGGGCCTTAAAAGGACCATGGCCCAGGAATGGGGGCGCTGGTTGGGCTTGGAGCTCAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR CCA 72 bp CTGGCAGGTTGCCCCTGCTCGTCTTCAGCCCCAACATaGGAGCTCCCTGGAGAAGACAGGTGGAGATTCACT +
Preference number: 3 (lower is better)
Translates to: LAGCPCSSSAPT*ELPGEDRWRFT
Trigger: AGTGAATCTCCACCTGTCTTCTCCAGGGAGCTCCCATGTTGGGGCTGAAGACGAGCAGGGGCAACCTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR CCA 72 bp CCAGGAAACTGTCCCAGTTCTCAGCGGTCCTGGCTGTaGACGGTATCTGAAATGGTCGCTGCGGCTTGCCCT +
Preference number: 3 (lower is better)
Translates to: PGNCPSSQRSWL*TVSEMVAAACP
Trigger: AGGGCAAGCCGCAGCGACCATTTCAGATACCGTCCACAGCCAGGACCGCTGAGAACTGGGACAGTTTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR CCA 72 bp TGGACCAGCATTACACAGGCATGGATTCTGGAAAGATaGACCCCTGGACACCACACCACCCTCTGGCCATCG +
Preference number: 3 (lower is better)
Translates to: WTSITQAWILER*TPGHHTTLWPS
Trigger: CGATGGCCAGAGGGTGGTGTGGTGTCCAGGGGTCCATCTTTCCAGAATCCATGCCTGTGTAATGCTGGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR TCA 72 bp CAGGAGAACCTCAGGGGCATCCCCTTCCTTAACACCTaGAGGAAACGGCTCCTAACGCTGTGTGATGCTTCC +
Preference number: 3 (lower is better)
Translates to: QENLRGIPFLNT*RKRLLTLCDAS
Trigger: GGAAGCATCACACAGCGTTAGGAGCCGTTTCCTTCAGGTGTTAAGGAAGGGGATGCCCCTGAGGTTCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR CCA 72 bp GCAAAGGCCAGCGACATCCTAATGCACGCAGGGGTGTaGGCAGGGTCCTCAGAGCATCTTACATCCAAACTA +
Preference number: 3 (lower is better)
Translates to: AKASDILMHAGV*AGSSEHLTSKL
Trigger: TAGTTTGGATGTAAGATGCTCTGAGGACCCTGCCCACACCCCTGCGTGCATTAGGATGTCGCTGGCCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR CCA 72 bp CATTACACAGGCATGGATTCTGGAAAGATGGACCCCTaGACACCACACCACCCTCTGGCCATCGCTGACTGT +
Preference number: 3 (lower is better)
Translates to: HYTGMDSGKMDP*TPHHPLAIADC
Trigger: ACAGTCAGCGATGGCCAGAGGGTGGTGTGGTGTCCAGGGGTCCATCTTTCCAGAATCCATGCCTGTGTAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR CCA 72 bp CTGGAAAGATGGACCCCTGGACACCACACCACCCTCTaGCCATCGCTGACTGTCTACAGGAACAAAATAGTC +
Preference number: 3 (lower is better)
Translates to: LERWTPGHHTTL*PSLTVYRNKIV
Trigger: GACTATTTTGTTCCTGTAGACAGTCAGCGATGGCCAGAGGGTGGTGTGGTGTCCAGGGGTCCATCTTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR CCA 72 bp CAGAAGCATGGACCAGCATTACACAGGCATGGATTCTaGAAAGATGGACCCCTGGACACCACACCACCCTCT +
Preference number: 3 (lower is better)
Translates to: QKHGPALHRHGF*KDGPLDTTPPS
Trigger: AGAGGGTGGTGTGGTGTCCAGGGGTCCATCTTTCCAGAATCCATGCCTGTGTAATGCTGGTCCATGCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR-3UTR CAA 90 bp CTGGAGAAGACAGGTGGAGATTCACTGCTGTCCACCCAGGTAAGGCAAGTCAGAGCTTTGCCTCCACAATaGTCGCAGCACCAAGATGAA +
Preference number: 3 (lower is better)
Translates to: LEKTGGDSLLSTQVRQVRALPPQ*SQHQDE
Trigger: TTCATCTTGGTGCTGCGACAATTGTGGAGGCAAAGC...TCTGACTTGCCTTACCTGGGTGGACAGCAGTGAATCTCCACCTGTCTTCTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR TCA 72 bp GAATGCTTTGCCTCCACAATTGTCGCAGCACCAAGATaGAGGCCAGAGGTGCCGTTTTACTCCTCAGATCTG +
Preference number: 3 (lower is better)
Translates to: ECFASTIVAAPR*RPEVPFYSSDL
Trigger: CAGATCTGAGGAGTAAAACGGCACCTCTGGCCTTCATCTTGGTGCTGCGACAATTGTGGAGGCAAAGCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR CCA 72 bp TGGAGGAAGGGTCATTTCTGGGCTCAGATCTTCACCTaGTTAGCCCCAGGTCTAATAAAGATATTTGAATTC +
Preference number: 3 (lower is better)
Translates to: WRKGHFWAQIFT*LAPGLIKIFEF
Trigger: GAATTCAAATATCTTTATTAGACCTGGGGCTAACCAGGTGAAGATCTGAGCCCAGAAATGACCCTTCCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR CCA 72 bp AAAATCGTATGTCTTGTGCTGAATGAAATAGGCGCTTaGCAGACACAGGTTCAGAAGCATGGACCAGCATTA +
Preference number: 3 (lower is better)
Translates to: KIVCLVLNEIGA*QTQVQKHGPAL
Trigger: TAATGCTGGTCCATGCTTCTGAACCTGTGTCTGCCAAGCGCCTATTTCATTCAGCACAAGACATACGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR GCA 90 bp GAGGCAACTCACAGGCCTGTGGGAGACCCCGGGCGTCCTCAAAGGAGGGGTGTGGCCAGGAAGCCGCACTaGTGGAGGCTACCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: EATHRPVGDPGRPQRRGVARKPH*WRLPGR
Trigger: GCGCCCAGGTAGCCTCCAGCAGTGCGGCTTCCTGGC...CACACCCCTCCTTTGAGGACGCCCGGGGTCTCCCACAGGCCTGTGAGTTGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR GCA 90 bp TGCCGAGGCAACTCACAGGCCTGTGGGAGACCCCGGGCGTCCTCAAAGGAGGGGCTGGCAGGTTGCCCCTaGTCGTCTTCAGCCCCAACA +
Preference number: 4 (lower is better)
Translates to: CRGNSQACGRPRASSKEGLAGCP*SSSAPT
Trigger: TGTTGGGGCTGAAGACGAGCAGGGGCAACCTGCCAG...CCCCTCCTTTGAGGACGCCCGGGGTCTCCCACAGGCCTGTGAGTTGCCTCGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp TGCCGAGGCAACTCACAGGCCTGTGGGAGACCCCGGGCGTCCTCAAAGGAGGGGCCCTCCTCAGAGTCCTaGGTGCTGTTCCTGCAACCC +
Preference number: 4 (lower is better)
Translates to: CRGNSQACGRPRASSKEGPSSES*VLFLQP
Trigger: GGGTTGCAGGAACAGCACCCAGGACTCTGAGGAGGG...CCCCTCCTTTGAGGACGCCCGGGGTCTCCCACAGGCCTGTGAGTTGCCTCGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR GCA 90 bp GAGGCAACTCACAGGCCTGTGGGAGACCCCGGGCGTCCTCAAAGGAGGGGTGTGCAGGGCCTACCTTGTTaGCAGGAAGCCGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: EATHRPVGDPGRPQRRGVQGLPC*QEAALL
Trigger: CAGCAGTGCGGCTTCCTGGCAACAAGGTAGGCCCTG...CACACCCCTCCTTTGAGGACGCCCGGGGTCTCCCACAGGCCTGTGAGTTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp TGCCCCTGCTCGTCTTCAGCCCCAACATGGGAGCTCCCTGGAGAAGACAGGTGGAGGAAGCCGCACTGCTaGAGGCTACCTGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: CPCSSSAPTWELPGEDRWRKPHC*RLPGRW
Trigger: CCAGCGCCCAGGTAGCCTCCAGCAGTGCGGCTTCCT...CCACCTGTCTTCTCCAGGGAGCTCCCATGTTGGGGCTGAAGACGAGCAGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR TCA 90 bp GAGGCAACTCACAGGCCTGTGGGAGACCCCGGGCGTCCTCAAAGGAGGGGTGTGGTCGCAGCACCAAGATaGAGGCCAGAGGTGCCGTTT +
Preference number: 4 (lower is better)
Translates to: EATHRPVGDPGRPQRRGVVAAPR*RPEVPF
Trigger: AAACGGCACCTCTGGCCTTCATCTTGGTGCTGCGAC...CACACCCCTCCTTTGAGGACGCCCGGGGTCTCCCACAGGCCTGTGAGTTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR TCA 90 bp CCAGGGCCTACCTTGTTGCCAGGAAGCCGCACTGCTGGAGGCTACCTGGGCGCTGCTGTGGACGGTATCTaGAATGGTCGCTGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: PGPTLLPGSRTAGGYLGAAVDGI*NGRCGL
Trigger: CAAGCCGCAGCGACCATTTCAGATACCGTCCACAGC...AGCGCCCAGGTAGCCTCCAGCAGTGCGGCTTCCTGGCAACAAGGTAGGCCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR GCA 90 bp GAAGCCACCCTGACTAGCCAGGAGAACCTCAGGGGCATCCCCTTCCTTAACACCGGCTCGGCGGCACCATaGAGGCTCAGGCTGGCACTC +
Preference number: 4 (lower is better)
Translates to: EATLTSQENLRGIPFLNTGSAAP*RLRLAL
Trigger: GAGTGCCAGCCTGAGCCTGCATGGTGCCGCCGAGCC...GGTGTTAAGGAAGGGGATGCCCCTGAGGTTCTCCTGGCTAGTCAGGGTGGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp TGCCGAGGCAACTCACAGGCCTGTGGGAGACCCCGGGCGTCCTCAAAGGAGGGGAACGAGCTGGCTGTCTaGAAGCTCCTTCCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: CRGNSQACGRPRASSKEGNELAV*KLLPSW
Trigger: CCAACTGGGAAGGAGCTTCCAGACAGCCAGCTCGTT...CCCCTCCTTTGAGGACGCCCGGGGTCTCCCACAGGCCTGTGAGTTGCCTCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp GAGGCAACTCACAGGCCTGTGGGAGACCCCGGGCGTCCTCAAAGGAGGGGTGTGCACCACACCACCCTCTaGCCATCGCTGACTGTCTAC +
Preference number: 4 (lower is better)
Translates to: EATHRPVGDPGRPQRRGVHHTTL*PSLTVY
Trigger: GTAGACAGTCAGCGATGGCCAGAGGGTGGTGTGGTG...CACACCCCTCCTTTGAGGACGCCCGGGGTCTCCCACAGGCCTGTGAGTTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp TGCCGAGGCAACTCACAGGCCTGTGGGAGACCCCGGGCGTCCTCAAAGGAGGGGCTGCTGGAGGCTACCTaGGCGCTGGGTTTTATTGCT +
Preference number: 4 (lower is better)
Translates to: CRGNSQACGRPRASSKEGLLEAT*ALGFIA
Trigger: AGCAATAAAACCCAGCGCCCAGGTAGCCTCCAGCAG...CCCCTCCTTTGAGGACGCCCGGGGTCTCCCACAGGCCTGTGAGTTGCCTCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR TCA 90 bp TGCCGAGGCAACTCACAGGCCTGTGGGAGACCCCGGGCGTCCTCAAAGGAGGGGCCCTCTGGCCATCGCTaGCTGTCTACAGGAACAAAA +
Preference number: 4 (lower is better)
Translates to: CRGNSQACGRPRASSKEGPSGHR*LSTGTK
Trigger: TTTTGTTCCTGTAGACAGTCAGCGATGGCCAGAGGG...CCCCTCCTTTGAGGACGCCCGGGGTCTCCCACAGGCCTGTGAGTTGCCTCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp CCACAATTGTCGCAGCACCAAGATGAAGGCCAGAGGTGCCGTTTTACTCCTCAGTCGGGTCCCGGGATGTaGCGGCGGCGGCAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: PQLSQHQDEGQRCRFTPQSGPGM*RRRQRK
Trigger: CTTCCGCTGCCGCCGCCGCCACATCCCGGGACCCGA...CTGAGGAGTAAAACGGCACCTCTGGCCTTCATCTTGGTGCTGCGACAATTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp CAGAGTCCTGGGTGCTGTTCCTGCAACCCACCAGTGATGGGTGAAGCCACCCTGCCTCTTGTCACCTACTaGAGCGGCGCTCGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: QSPGCCSCNPPVMGEATLPLVTY*SGARPG
Trigger: ACCCGGACGAGCGCCGCTCCAGTAGGTGACAAGAGG...CAGGGTGGCTTCACCCATCACTGGTGGGTTGCAGGAACAGCACCCAGGACTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp CCCTCTGAGGTGAGCAAAGGCCAGCGACATCCTAATGCACGCAGGGGTGTGGGCATGCACGCAGGGGTGTaGGCAGGGTCCTCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: PSEVSKGQRHPNARRGVGMHAGV*AGSSEH
Trigger: ATGCTCTGAGGACCCTGCCCACACCCCTGCGTGCAT...GCCCACACCCCTGCGTGCATTAGGATGTCGCTGGCCTTTGCTCACCTCAGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR GCA 90 bp GAGGCAACTCACAGGCCTGTGGGAGACCCCGGGCGTCCTCAAAGGAGGGGTGTGAATCACCCAAAAGCATaGGGCCAGCAGAAGCCACTG +
Preference number: 4 (lower is better)
Translates to: EATHRPVGDPGRPQRRGVNHPKA*GQQKPL
Trigger: CAGTGGCTTCTGCTGGCCGCATGCTTTTGGGTGATT...CACACCCCTCCTTTGAGGACGCCCGGGGTCTCCCACAGGCCTGTGAGTTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR TCA 90 bp GAGGCAACTCACAGGCCTGTGGGAGACCCCGGGCGTCCTCAAAGGAGGGGTGTGACGTCACCCAGTGAATaGTGTGGTCCCCAAACTGAA +
Preference number: 4 (lower is better)
Translates to: EATHRPVGDPGRPQRRGVTSPSE*CGPQTE
Trigger: TTCAGTTTGGGGACCACATCATTCACTGGGTGACGT...CACACCCCTCCTTTGAGGACGCCCGGGGTCTCCCACAGGCCTGTGAGTTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR TCA 90 bp GAGGCAACTCACAGGCCTGTGGGAGACCCCGGGCGTCCTCAAAGGAGGGGTGTGGGATGTCTCGTTTGCTaGTGCCCAGGAAATAGTGCT +
Preference number: 4 (lower is better)
Translates to: EATHRPVGDPGRPQRRGVGCLVC*CPGNSA
Trigger: AGCACTATTTCCTGGGCATCAGCAAACGAGACATCC...CACACCCCTCCTTTGAGGACGCCCGGGGTCTCCCACAGGCCTGTGAGTTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR TCA 90 bp TGCCGAGGCAACTCACAGGCCTGTGGGAGACCCCGGGCGTCCTCAAAGGAGGGGATGTCTTGTGCTGAATaGAATAGGCGCTTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: CRGNSQACGRPRASSKEGMSCAE*NRRLAD
Trigger: GTCTGCCAAGCGCCTATTTCATTCAGCACAAGACAT...CCCCTCCTTTGAGGACGCCCGGGGTCTCCCACAGGCCTGTGAGTTGCCTCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR GCA 90 bp GCCCAACCAGCGCCCCCATTCCTGGGCCATGGTCCTTTTAAGGCCCTCAAAGACCCTCAGAGTCCTGGGTaGTGTTCCTGCAACCCACCA +
Preference number: 4 (lower is better)
Translates to: AQPAPPFLGHGPFKALKDPQSPG*CSCNPP
Trigger: TGGTGGGTTGCAGGAACAGCACCCAGGACTCTGAGG...GTCTTTGAGGGCCTTAAAAGGACCATGGCCCAGGAATGGGGGCGCTGGTTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp CCAGGGCCTACCTTGTTGCCAGGAAGCCGCACTGCTGGAGGCTACCTGGGCGCTGGGTGTTGCCCACTTTaGGAGTCTGGCAGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: PGPTLLPGSRTAGGYLGAGCCPL*ESGRKE
Trigger: TTCTTTTCTGCCAGACTCCCAAAGTGGGCAACACCC...AGCGCCCAGGTAGCCTCCAGCAGTGCGGCTTCCTGGCAACAAGGTAGGCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp CCAGCGCCCCCATTCCTGGGCCATGGTCCTTTTAAGGCCCTCAAAGACACTCCCGGAAAGATGGACCCCTaGACACCACACCACCCTCTG +
Preference number: 4 (lower is better)
Translates to: PAPPFLGHGPFKALKDTPGKMDP*TPHHPL
Trigger: CAGAGGGTGGTGTGGTGTCCAGGGGTCCATCTTTCC...GGGAGTGTCTTTGAGGGCCTTAAAAGGACCATGGCCCAGGAATGGGGGCGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR TCA 90 bp CCAGCGCCCCCATTCCTGGGCCATGGTCCTTTTAAGGCCCTCAAAGACACTCCCACCGCAGCCATTCACTaGCTCTTCCTTCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PAPPFLGHGPFKALKDTPTAAIH*LFLLQP
Trigger: AGGCTGCAGAAGGAAGAGTCAGTGAATGGCTGCGGT...GGGAGTGTCTTTGAGGGCCTTAAAAGGACCATGGCCCAGGAATGGGGGCGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR TCA 90 bp CCAGGGCCTACCTTGTTGCCAGGAAGCCGCACTGCTGGAGGCTACCTGGGCGCTGAATTTCTGCATCACTaGAGGAAGAGAGCCGAGGAA +
Preference number: 4 (lower is better)
Translates to: PGPTLLPGSRTAGGYLGAEFLHH*RKRAEE
Trigger: TTCCTCGGCTCTCTTCCTTCAGTGATGCAGAAATTC...AGCGCCCAGGTAGCCTCCAGCAGTGCGGCTTCCTGGCAACAAGGTAGGCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR TCA 90 bp ATGGGTGAAGCCACCCTGACTAGCCAGGAGAACCTCAGGGGCATCCCCTTCCTTTGGGTGAAGCCACCCTaGCTAGCCAGGAGAACCTCA +
Preference number: 4 (lower is better)
Translates to: MGEATLTSQENLRGIPFLWVKPP*LARRTS
Trigger: TGAGGTTCTCCTGGCTAGTCAGGGTGGCTTCACCCA...AAGGAAGGGGATGCCCCTGAGGTTCTCCTGGCTAGTCAGGGTGGCTTCACCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR TCA 90 bp GAAGCCACCCTGACTAGCCAGGAGAACCTCAGGGGCATCCCCTTCCTTAACACCAAGGCAAGTCAGAACTaGTGCGCCGGGATCCACAGC +
Preference number: 4 (lower is better)
Translates to: EATLTSQENLRGIPFLNTKASQN*CAGIHS
Trigger: GCTGTGGATCCCGGCGCATCAGTTCTGACTTGCCTT...GGTGTTAAGGAAGGGGATGCCCCTGAGGTTCTCCTGGCTAGTCAGGGTGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR GCA 90 bp CCCTCTGAGGTGAGCAAAGGCCAGCGACATCCTAATGCACGCAGGGGTGTGGGCGTGATGCTTCCTCCCTaGTGGGCTGTCAAACTGCAA +
Preference number: 4 (lower is better)
Translates to: PSEVSKGQRHPNARRGVGVMLPP*WAVKLQ
Trigger: TTGCAGTTTGACAGCCCAGCAGGGAGGAAGCATCAC...GCCCACACCCCTGCGTGCATTAGGATGTCGCTGGCCTTTGCTCACCTCAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR GCA 90 bp TACACAGGCATGGATTCTGGAAAGATGGACCCCTGGACACCACACCACCCTCTGCGCTGCGGCTTGCCCTaGACCAGGGCCTACCTTGTT +
Preference number: 4 (lower is better)
Translates to: YTGMDSGKMDPWTPHHPLRCGLP*TRAYLV
Trigger: AACAAGGTAGGCCCTGGTGCAGGGCAAGCCGCAGCG...CAGAGGGTGGTGTGGTGTCCAGGGGTCCATCTTTCCAGAATCCATGCCTGTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp GCCCAACCAGCGCCCCCATTCCTGGGCCATGGTCCTTTTAAGGCCCTCAAAGACAGCAGAAGCCACTGGTaGTGCATGTTGTCACACCGC +
Preference number: 4 (lower is better)
Translates to: AQPAPPFLGHGPFKALKDSRSHW*CMLSHR
Trigger: GCGGTGTGACAACATGCACCACCAGTGGCTTCTGCT...GTCTTTGAGGGCCTTAAAAGGACCATGGCCCAGGAATGGGGGCGCTGGTTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp TGCCCCTGCTCGTCTTCAGCCCCAACATGGGAGCTCCCTGGAGAAGACAGGTGGTCCTCCAGGGTCTCGTaGTGTCCAATCACACTGTAC +
Preference number: 4 (lower is better)
Translates to: CPCSSSAPTWELPGEDRWSSRVS*CPITLY
Trigger: GTACAGTGTGATTGGACACCACGAGACCCTGGAGGA...CCACCTGTCTTCTCCAGGGAGCTCCCATGTTGGGGCTGAAGACGAGCAGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp GCCCAACCAGCGCCCCCATTCCTGGGCCATGGTCCTTTTAAGGCCCTCAAAGACTCTTCAGCCCCAACATaGGAGCTCCCTGGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: AQPAPPFLGHGPFKALKDSSAPT*ELPGED
Trigger: GTCTTCTCCAGGGAGCTCCCATGTTGGGGCTGAAGA...GTCTTTGAGGGCCTTAAAAGGACCATGGCCCAGGAATGGGGGCGCTGGTTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp GCCCAACCAGCGCCCCCATTCCTGGGCCATGGTCCTTTTAAGGCCCTCAAAGACCAGCGGTCCTGGCTGTaGACGGTATCTGAAATGGTC +
Preference number: 4 (lower is better)
Translates to: AQPAPPFLGHGPFKALKDQRSWL*TVSEMV
Trigger: GACCATTTCAGATACCGTCCACAGCCAGGACCGCTG...GTCTTTGAGGGCCTTAAAAGGACCATGGCCCAGGAATGGGGGCGCTGGTTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR GCA 90 bp TGCCCCTGCTCGTCTTCAGCCCCAACATGGGAGCTCCCTGGAGAAGACAGGTGGTTGGAGACAGGAGTGTaGGAGAGATTCTTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: CPCSSSAPTWELPGEDRWLETGV*ERFFRA
Trigger: TGCCCTGAAGAATCTCTCGCACACTCCTGTCTCCAA...CCACCTGTCTTCTCCAGGGAGCTCCCATGTTGGGGCTGAAGACGAGCAGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR GCA 90 bp CAGAGTCCTGGGTGCTGTTCCTGCAACCCACCAGTGATGGGTGAAGCCACCCTGTTCTTCTCGTGGTCGTaGACCACGTTTTCGGGGATC +
Preference number: 4 (lower is better)
Translates to: QSPGCCSCNPPVMGEATLFFSWS*TTFSGI
Trigger: GATCCCCGAAAACGTGGTGCACGACCACGAGAAGAA...CAGGGTGGCTTCACCCATCACTGGTGGGTTGCAGGAACAGCACCCAGGACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR GCA 90 bp TGCCGAGGCAACTCACAGGCCTGTGGGAGACCCCGGGCGTCCTCAAAGGAGGGGGCTGGGCTGTCAAACTaGAAATCTTTAGCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: CRGNSQACGRPRASSKEGAGLSN*KSLAFS
Trigger: AGAAAAGGCTAAAGATTTGCAGTTTGACAGCCCAGC...CCCCTCCTTTGAGGACGCCCGGGGTCTCCCACAGGCCTGTGAGTTGCCTCGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp TGGGCCATGGTCCTTTTAAGGCCCTCAAAGACACTCCCCTTCTCAGGTAGAAAAGCGCTAGACCGGCTTTaGGGGCCAGAACGCCGGCAC +
Preference number: 4 (lower is better)
Translates to: WAMVLLRPSKTLPFSGRKALDRL*GPERRH
Trigger: GTGCCGGCGTTCTGGCCCCCAAAGCCGGTCTAGCGC...TTTTCTACCTGAGAAGGGGAGTGTCTTTGAGGGCCTTAAAAGGACCATGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp CAGAGTCCTGGGTGCTGTTCCTGCAACCCACCAGTGATGGGTGAAGCCACCCTGAGGCTACCTGGGCGCTaGGTTTTATTGCTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: QSPGCCSCNPPVMGEATLRLPGR*VLLLVN
Trigger: GTTCACCAGCAATAAAACCCAGCGCCCAGGTAGCCT...CAGGGTGGCTTCACCCATCACTGGTGGGTTGCAGGAACAGCACCCAGGACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR TCA 90 bp ATGGGTGAAGCCACCCTGACTAGCCAGGAGAACCTCAGGGGCATCCCCTTCCTTCCCTTCCTTAACACCTaGAGGAAACGGCTCCTAACG +
Preference number: 4 (lower is better)
Translates to: MGEATLTSQENLRGIPFLPFLNT*RKRLLT
Trigger: CGTTAGGAGCCGTTTCCTTCAGGTGTTAAGGAAGGG...AAGGAAGGGGATGCCCCTGAGGTTCTCCTGGCTAGTCAGGGTGGCTTCACCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR GCA 90 bp GCCCAACCAGCGCCCCCATTCCTGGGCCATGGTCCTTTTAAGGCCCTCAAAGACGGGCTCACATTTCCTTaGTGTGTTTCCCCTGAACTG +
Preference number: 4 (lower is better)
Translates to: AQPAPPFLGHGPFKALKDGLTFP*CVSPEL
Trigger: CAGTTCAGGGGAAACACAGCAAGGAAATGTGAGCCC...GTCTTTGAGGGCCTTAAAAGGACCATGGCCCAGGAATGGGGGCGCTGGTTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR GCA 90 bp TACACAGGCATGGATTCTGGAAAGATGGACCCCTGGACACCACACCACCCTCTGGGGTTCTGCGTCATATaGCGAGGCAACTCACAGGCC +
Preference number: 4 (lower is better)
Translates to: YTGMDSGKMDPWTPHHPLGFCVI*RGNSQA
Trigger: GGCCTGTGAGTTGCCTCGGCATATGACGCAGAACCC...CAGAGGGTGGTGTGGTGTCCAGGGGTCCATCTTTCCAGAATCCATGCCTGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR GCA 90 bp AGAAAGAATGCTTTGCCTCCACAATTGTCGCAGCACCAAGATGAAGGCCAGAGGATGGTCGCTGCGGCTTaGCCTGCACCAGGGCCTACC +
Preference number: 4 (lower is better)
Translates to: RKNALPPQLSQHQDEGQRMVAAA*PAPGPT
Trigger: GGTAGGCCCTGGTGCAGGGCAAGCCGCAGCGACCAT...CCTCTGGCCTTCATCTTGGTGCTGCGACAATTGTGGAGGCAAAGCATTCTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp ACCTTGTTGCCAGGAAGCCGCACTGCTGGAGGCTACCTGGGCGCTGGGTTTTATCTTCCTTCTGCAGCCTaGGGCTCACATTTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: TLLPGSRTAGGYLGAGFYLPSAA*GSHFLA
Trigger: AGCAAGGAAATGTGAGCCCCAGGCTGCAGAAGGAAG...ATAAAACCCAGCGCCCAGGTAGCCTCCAGCAGTGCGGCTTCCTGGCAACAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp CCAGCGCCCCCATTCCTGGGCCATGGTCCTTTTAAGGCCCTCAAAGACACTCCCACGAAATCTTCAAACTaGATCCCCCGGGTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PAPPFLGHGPFKALKDTPTKSSN*IPRVSV
Trigger: GACAGAGACCCGGGGGATCCAGTTTGAAGATTTCGT...GGGAGTGTCTTTGAGGGCCTTAAAAGGACCATGGCCCAGGAATGGGGGCGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264249.8
3UTR CAA 72 bp GATGCTGCAAAAGTCTCTGCGATTTCAGCAGCCCCCTaGCTTCTCTGTCCCTCCTCAGAGTCCTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: DAAKVSAISAAP*LLCPSSESWVL
Trigger: CAGCACCCAGGACTCTGAGGAGGGACAGAGAAGCAAGGGGGCTGCTGAAATCGCAGAGACTTTTGCAGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR TCA 90 bp GAAGCCACCCTGACTAGCCAGGAGAACCTCAGGGGCATCCCCTTCCTTAACACCTTGCTGTGTTTCCCCTaGACTGAGGTTCTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: EATLTSQENLRGIPFLNTLLCFP*TEVLGS
Trigger: GGAACCAAGAACCTCAGTTCAGGGGAAACACAGCAA...GGTGTTAAGGAAGGGGATGCCCCTGAGGTTCTCCTGGCTAGTCAGGGTGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR TCA 90 bp CCACAATTGTCGCAGCACCAAGATGAAGGCCAGAGGTGCCGTTTTACTCCTCAGTTCTCCCCTCTGAGGTaGGCAAAGGCCAGCGACATC +
Preference number: 4 (lower is better)
Translates to: PQLSQHQDEGQRCRFTPQFSPLR*AKASDI
Trigger: GATGTCGCTGGCCTTTGCTCACCTCAGAGGGGAGAA...CTGAGGAGTAAAACGGCACCTCTGGCCTTCATCTTGGTGCTGCGACAATTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp GAAGCCACCCTGACTAGCCAGGAGAACCTCAGGGGCATCCCCTTCCTTAACACCAGGAAGGGTCATTTCTaGGCTCAGATCTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: EATLTSQENLRGIPFLNTRKGHF*AQIFTW
Trigger: CCAGGTGAAGATCTGAGCCCAGAAATGACCCTTCCT...GGTGTTAAGGAAGGGGATGCCCCTGAGGTTCTCCTGGCTAGTCAGGGTGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp TGCCCCTGCTCGTCTTCAGCCCCAACATGGGAGCTCCCTGGAGAAGACAGGTGGAATGAAATAGGCGCTTaGCAGACACAGGTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: CPCSSSAPTWELPGEDRWNEIGA*QTQVQK
Trigger: CTTCTGAACCTGTGTCTGCCAAGCGCCTATTTCATT...CCACCTGTCTTCTCCAGGGAGCTCCCATGTTGGGGCTGAAGACGAGCAGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp GAAGCCACCCTGACTAGCCAGGAGAACCTCAGGGGCATCCCCTTCCTTAACACCCATGGTCCAGGATGGTaGTGTGATCAGAAATGGCTC +
Preference number: 4 (lower is better)
Translates to: EATLTSQENLRGIPFLNTHGPGW*CDQKWL
Trigger: GAGCCATTTCTGATCACACCACCATCCTGGACCATG...GGTGTTAAGGAAGGGGATGCCCCTGAGGTTCTCCTGGCTAGTCAGGGTGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR TCA 90 bp AGAAAGAATGCTTTGCCTCCACAATTGTCGCAGCACCAAGATGAAGGCCAGAGGGCTCCTAACGCTGTGTaGTGCTTCCTCCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RKNALPPQLSQHQDEGQRAPNAV*CFLPAG
Trigger: CCCAGCAGGGAGGAAGCATCACACAGCGTTAGGAGC...CCTCTGGCCTTCATCTTGGTGCTGCGACAATTGTGGAGGCAAAGCATTCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR GCA 90 bp CCACAATTGTCGCAGCACCAAGATGAAGGCCAGAGGTGCCGTTTTACTCCTCAGAGAAGCCACTGGTGGTaGATGTTGTCACACCGCAGC +
Preference number: 4 (lower is better)
Translates to: PQLSQHQDEGQRCRFTPQRSHWW*MLSHRS
Trigger: GCTGCGGTGTGACAACATGCACCACCAGTGGCTTCT...CTGAGGAGTAAAACGGCACCTCTGGCCTTCATCTTGGTGCTGCGACAATTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp ACCTTGTTGCCAGGAAGCCGCACTGCTGGAGGCTACCTGGGCGCTGGGTTTTATTCCTCACTTCCGGCATaGTTGTCAGGAACAGAAACT +
Preference number: 4 (lower is better)
Translates to: TLLPGSRTAGGYLGAGFYSSLPA*LSGTET
Trigger: AGTTTCTGTTCCTGACAACCATGCCGGAAGTGAGGA...ATAAAACCCAGCGCCCAGGTAGCCTCCAGCAGTGCGGCTTCCTGGCAACAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp GAAGCCACCCTGACTAGCCAGGAGAACCTCAGGGGCATCCCCTTCCTTAACACCCCCACTTTGGGAGTCTaGCAGAAAAGAATCTTGTGC +
Preference number: 4 (lower is better)
Translates to: EATLTSQENLRGIPFLNTPTLGV*QKRILC
Trigger: GCACAAGATTCTTTTCTGCCAGACTCCCAAAGTGGG...GGTGTTAAGGAAGGGGATGCCCCTGAGGTTCTCCTGGCTAGTCAGGGTGGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp GCCCAACCAGCGCCCCCATTCCTGGGCCATGGTCCTTTTAAGGCCCTCAAAGACCTAAGTTGTAACAGTTaGGGTTCTGCGTCATATGCC +
Preference number: 4 (lower is better)
Translates to: AQPAPPFLGHGPFKALKDLSCNS*GSASYA
Trigger: GGCATATGACGCAGAACCCCAACTGTTACAACTTAG...GTCTTTGAGGGCCTTAAAAGGACCATGGCCCAGGAATGGGGGCGCTGGTTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR TCA 90 bp TACACAGGCATGGATTCTGGAAAGATGGACCCCTGGACACCACACCACCCTCTGATCAGGAAACCATTCTaGGAAAAGGTAGAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: YTGMDSGKMDPWTPHHPLIRKPF*EKVEAA
Trigger: GGCGGCCTCTACCTTTTCTCAGAATGGTTTCCTGAT...CAGAGGGTGGTGTGGTGTCCAGGGGTCCATCTTTCCAGAATCCATGCCTGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp GCCGTTTTACTCCTCAGATCTGATGCTGCAAAAGTCTCTGCGATTTCAGCAGCCGGACGGTATCTGAAATaGTCGCTGCGGCTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: AVLLLRSDAAKVSAISAAGRYLK*SLRLAL
Trigger: CAGGGCAAGCCGCAGCGACCATTTCAGATACCGTCC...GGCTGCTGAAATCGCAGAGACTTTTGCAGCATCAGATCTGAGGAGTAAAACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp CCACAATTGTCGCAGCACCAAGATGAAGGCCAGAGGTGCCGTTTTACTCCTCAGAGTTCTCAGCGGTCCTaGCTGTGGACGGTATCTGAA +
Preference number: 4 (lower is better)
Translates to: PQLSQHQDEGQRCRFTPQSSQRS*LWTVSE
Trigger: TTCAGATACCGTCCACAGCCAGGACCGCTGAGAACT...CTGAGGAGTAAAACGGCACCTCTGGCCTTCATCTTGGTGCTGCGACAATTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR TCA 90 bp CAGAGTCCTGGGTGCTGTTCCTGCAACCCACCAGTGATGGGTGAAGCCACCCTGGTTTTCAATCGCTTCTaGATTTCTGCATCACTGAAG +
Preference number: 4 (lower is better)
Translates to: QSPGCCSCNPPVMGEATLVFNRF*ISASLK
Trigger: CTTCAGTGATGCAGAAATTCAGAAGCGATTGAAAAC...CAGGGTGGCTTCACCCATCACTGGTGGGTTGCAGGAACAGCACCCAGGACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp TGGGCCATGGTCCTTTTAAGGCCCTCAAAGACACTCCCCTTCTCAGGTAGAAAAGCCAGCAGAAGCCACTaGTGGTGCATGTTGTCACAC +
Preference number: 4 (lower is better)
Translates to: WAMVLLRPSKTLPFSGRKASRSH*WCMLSH
Trigger: GTGTGACAACATGCACCACCAGTGGCTTCTGCTGGC...TTTTCTACCTGAGAAGGGGAGTGTCTTTGAGGGCCTTAAAAGGACCATGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp CATTTCTGGGCTCAGATCTTCACCTGGTTAGCCCCAGGTCTAATAAAGATATTTCAACTCACAGGCCTGTaGGAGACCCCGGGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: HFWAQIFTWLAPGLIKIFQLTGL*ETPGVL
Trigger: GAGGACGCCCGGGGTCTCCCACAGGCCTGTGAGTTG...AAATATCTTTATTAGACCTGGGGCTAACCAGGTGAAGATCTGAGCCCAGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp GCCGTTTTACTCCTCAGATCTGATGCTGCAAAAGTCTCTGCGATTTCAGCAGCCGGTCCAGGACAAACTTaGAGACAGGAGTGTGCGAGA +
Preference number: 4 (lower is better)
Translates to: AVLLLRSDAAKVSAISAAGPGQT*RQECAR
Trigger: TCTCGCACACTCCTGTCTCCAAGTTTGTCCTGGACC...GGCTGCTGAAATCGCAGAGACTTTTGCAGCATCAGATCTGAGGAGTAAAACGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp AGAAAGAATGCTTTGCCTCCACAATTGTCGCAGCACCAAGATGAAGGCCAGAGGAAAGGAGGGGTGTGGTaGAGGAAGGGTCATTTCTGG +
Preference number: 4 (lower is better)
Translates to: RKNALPPQLSQHQDEGQRKGGVW*RKGHFW
Trigger: CCAGAAATGACCCTTCCTCCACCACACCCCTCCTTT...CCTCTGGCCTTCATCTTGGTGCTGCGACAATTGTGGAGGCAAAGCATTCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp TGGGCCATGGTCCTTTTAAGGCCCTCAAAGACACTCCCCTTCTCAGGTAGAAAACTCAAAGGAGGGGTGTaGTGGAGGAAGGGTCATTTC +
Preference number: 4 (lower is better)
Translates to: WAMVLLRPSKTLPFSGRKLKGGV*WRKGHF
Trigger: GAAATGACCCTTCCTCCACCACACCCCTCCTTTGAG...TTTTCTACCTGAGAAGGGGAGTGTCTTTGAGGGCCTTAAAAGGACCATGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR TCA 90 bp AGAAAGAATGCTTTGCCTCCACAATTGTCGCAGCACCAAGATGAAGGCCAGAGGACATACGTCACCCAGTaGATGATGTGGTCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: RKNALPPQLSQHQDEGQRTYVTQ*MMWSPN
Trigger: GTTTGGGGACCACATCATTCACTGGGTGACGTATGT...CCTCTGGCCTTCATCTTGGTGCTGCGACAATTGTGGAGGCAAAGCATTCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR TCA 90 bp TGGGCTCAGATCTTCACCTGGTTAGCCCCAGGTCTAATAAAGATATTTGAATTCGCCTTTTCTCCCCTCTaGGGTGAGCAAAGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: WAQIFTWLAPGLIKIFEFAFSPL*GEQRPA
Trigger: CGCTGGCCTTTGCTCACCTCAGAGGGGAGAAAAGGC...GAATTCAAATATCTTTATTAGACCTGGGGCTAACCAGGTGAAGATCTGAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR GCA 90 bp TGGGCCATGGTCCTTTTAAGGCCCTCAAAGACACTCCCCTTCTCAGGTAGAAAACCAGGAGCAATCTCATaGCTGTACCAAGGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: WAMVLLRPSKTLPFSGRKPGAIS*LYQGSN
Trigger: GTTTGAGCCTTGGTACAGGCATGAGATTGCTCCTGG...TTTTCTACCTGAGAAGGGGAGTGTCTTTGAGGGCCTTAAAAGGACCATGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp TACACAGGCATGGATTCTGGAAAGATGGACCCCTGGACACCACACCACCCTCTGCGGGGATCTCCTCAATaGAAGAAAATGCTCCATTTA +
Preference number: 4 (lower is better)
Translates to: YTGMDSGKMDPWTPHHPLRGSPQ*KKMLHL
Trigger: TAAATGGAGCATTTTCTTCCATTGAGGAGATCCCCG...CAGAGGGTGGTGTGGTGTCCAGGGGTCCATCTTTCCAGAATCCATGCCTGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp TGGGCCATGGTCCTTTTAAGGCCCTCAAAGACACTCCCCTTCTCAGGTAGAAAAGCTCAGATCTTCACCTaGTTAGCCCCAGGTCTAATA +
Preference number: 4 (lower is better)
Translates to: WAMVLLRPSKTLPFSGRKAQIFT*LAPGLI
Trigger: TATTAGACCTGGGGCTAACCAGGTGAAGATCTGAGC...TTTTCTACCTGAGAAGGGGAGTGTCTTTGAGGGCCTTAAAAGGACCATGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp TCATTTCTGGGCTCAGATCTTCACCTGGTTAGCCCCAGGTCTAATAAAGATATTCAGCGCCCCCATTCCTaGGCCATGGTCCTTTTAAGG +
Preference number: 4 (lower is better)
Translates to: SFLGSDLHLVSPRSNKDIQRPHS*AMVLLR
Trigger: CCTTAAAAGGACCATGGCCCAGGAATGGGGGCGCTG...AATATCTTTATTAGACCTGGGGCTAACCAGGTGAAGATCTGAGCCCAGAAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR TCA 90 bp TCATTTCTGGGCTCAGATCTTCACCTGGTTAGCCCCAGGTCTAATAAAGATATTAGGGATAGTCGGGTATaGCACCAGGTGGTCAATGCC +
Preference number: 4 (lower is better)
Translates to: SFLGSDLHLVSPRSNKDIRDSRV*HQVVNA
Trigger: GGCATTGACCACCTGGTGTCATACCCGACTATCCCT...AATATCTTTATTAGACCTGGGGCTAACCAGGTGAAGATCTGAGCCCAGAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR GCA 90 bp AGAAAGAATGCTTTGCCTCCACAATTGTCGCAGCACCAAGATGAAGGCCAGAGGAGTTCCTCAGGAATGTaGTTCTCTTCTGGCAACTTC +
Preference number: 4 (lower is better)
Translates to: RKNALPPQLSQHQDEGQRSSSGM*FSSGNF
Trigger: GAAGTTGCCAGAAGAGAAGCACATTCCTGAGGAACT...CCTCTGGCCTTCATCTTGGTGCTGCGACAATTGTGGAGGCAAAGCATTCTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp TCATTTCTGGGCTCAGATCTTCACCTGGTTAGCCCCAGGTCTAATAAAGATATTAGGCCGTTCTTCTCGTaGTCGTGCACCACGTTTTCG +
Preference number: 4 (lower is better)
Translates to: SFLGSDLHLVSPRSNKDIRPFFS*SCTTFS
Trigger: CGAAAACGTGGTGCACGACCACGAGAAGAACGGCCT...AATATCTTTATTAGACCTGGGGCTAACCAGGTGAAGATCTGAGCCCAGAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp TCATTTCTGGGCTCAGATCTTCACCTGGTTAGCCCCAGGTCTAATAAAGATATTTGGATTCTGGAAAGATaGACCCCTGGACACCACACC +
Preference number: 4 (lower is better)
Translates to: SFLGSDLHLVSPRSNKDIWILER*TPGHHT
Trigger: GGTGTGGTGTCCAGGGGTCCATCTTTCCAGAATCCA...AATATCTTTATTAGACCTGGGGCTAACCAGGTGAAGATCTGAGCCCAGAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp CATTTCTGGGCTCAGATCTTCACCTGGTTAGCCCCAGGTCTAATAAAGATATTTCACAGGCATGGATTCTaGAAAGATGGACCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: HFWAQIFTWLAPGLIKIFHRHGF*KDGPLD
Trigger: GTCCAGGGGTCCATCTTTCCAGAATCCATGCCTGTG...AAATATCTTTATTAGACCTGGGGCTAACCAGGTGAAGATCTGAGCCCAGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR GCA 90 bp CATTTCTGGGCTCAGATCTTCACCTGGTTAGCCCCAGGTCTAATAAAGATATTTACTGACTCTTCCTTCTaGAGCCTGGGGCTCACATTT +
Preference number: 4 (lower is better)
Translates to: HFWAQIFTWLAPGLIKIFTDSSF*SLGLTF
Trigger: AAATGTGAGCCCCAGGCTGCAGAAGGAAGAGTCAGT...AAATATCTTTATTAGACCTGGGGCTAACCAGGTGAAGATCTGAGCCCAGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp CATTTCTGGGCTCAGATCTTCACCTGGTTAGCCCCAGGTCTAATAAAGATATTTAGCACTTTCTTCCACTaGGTGTTGCCCACTTTGGGA +
Preference number: 4 (lower is better)
Translates to: HFWAQIFTWLAPGLIKIFSTFFH*VLPTLG
Trigger: TCCCAAAGTGGGCAACACCCAGTGGAAGAAAGTGCT...AAATATCTTTATTAGACCTGGGGCTAACCAGGTGAAGATCTGAGCCCAGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp TCATTTCTGGGCTCAGATCTTCACCTGGTTAGCCCCAGGTCTAATAAAGATATTATGCTTCCTCCCTGCTaGGCTGTCAAACTGCAAATC +
Preference number: 4 (lower is better)
Translates to: SFLGSDLHLVSPRSNKDIMLPPC*AVKLQI
Trigger: GATTTGCAGTTTGACAGCCCAGCAGGGAGGAAGCAT...AATATCTTTATTAGACCTGGGGCTAACCAGGTGAAGATCTGAGCCCAGAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp TCATTTCTGGGCTCAGATCTTCACCTGGTTAGCCCCAGGTCTAATAAAGATATTAATGTGCTTCTCTTCTaGCAACTTCCTCACTTCCGG +
Preference number: 4 (lower is better)
Translates to: SFLGSDLHLVSPRSNKDINVLLF*QLPHFR
Trigger: CCGGAAGTGAGGAAGTTGCCAGAAGAGAAGCACATT...AATATCTTTATTAGACCTGGGGCTAACCAGGTGAAGATCTGAGCCCAGAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CCA 90 bp TCATTTCTGGGCTCAGATCTTCACCTGGTTAGCCCCAGGTCTAATAAAGATATTAAGCTCCTTCCCAGTTaGCTTCAGTTCCTCAGGAAT +
Preference number: 4 (lower is better)
Translates to: SFLGSDLHLVSPRSNKDIKLLPS*LQFLRN
Trigger: ATTCCTGAGGAACTGAAGCCAACTGGGAAGGAGCTT...AATATCTTTATTAGACCTGGGGCTAACCAGGTGAAGATCTGAGCCCAGAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR TCA 90 bp CATTTCTGGGCTCAGATCTTCACCTGGTTAGCCCCAGGTCTAATAAAGATATTTTTTACTCCTCAGATCTaGTGCTGCAAAAGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: HFWAQIFTWLAPGLIKIFFTPQI*CCKSLC
Trigger: GCAGAGACTTTTGCAGCATCAGATCTGAGGAGTAAA...AAATATCTTTATTAGACCTGGGGCTAACCAGGTGAAGATCTGAGCCCAGAAATG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR GCA 90 bp TGGGCTCAGATCTTCACCTGGTTAGCCCCAGGTCTAATAAAGATATTTGAATTCACACCAGGTGGTCAATaGCAGCCTCTTTTAAGATGT +
Preference number: 4 (lower is better)
Translates to: WAQIFTWLAPGLIKIFEFTPGGQ*QPLLRC
Trigger: ACATCTTAAAAGAGGCTGGCATTGACCACCTGGTGT...GAATTCAAATATCTTTATTAGACCTGGGGCTAACCAGGTGAAGATCTGAGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR GCA 90 bp TGGGCTCAGATCTTCACCTGGTTAGCCCCAGGTCTAATAAAGATATTTGAATTCACAGAAAGAATGCTTTaGCTCCACAATTGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: WAQIFTWLAPGLIKIFEFTERML*LHNCRS
Trigger: GCTGCGACAATTGTGGAGGCAAAGCATTCTTTCTGT...GAATTCAAATATCTTTATTAGACCTGGGGCTAACCAGGTGAAGATCTGAGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS CCA 90 bp ACTGGAGCGGCGCTCGTCCGGGTCCTTAGGCTCCTCCCCTGGCCCTaGGGGCGCCGCGCGGGTCGGGCTTCGCCGGGCCTGTGGGCGAAG +
Preference number: 5 (lower is better)
Translates to: TGAALVRVLRLLPWP*GRRAGRASPGLWAK
Trigger: CTTCGCCCACAGGCCCGGCGAAGCCCGACCCGCGCGGCGCCCCCAGGGCCAGGGGAGGAGCCTAAGGACCCGGACGAGCGCCGCTCCAGT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264249.8
ENST00000485085.5
CDS CCA 90 bp GCGGCAGCGGAAGTAAGGAAGACGCCCGGCGCGCTAGACCGGCTTTaGGGGCCAGAACGCCGGCACCGCCTCACGCGGCCCCCTCGCGCC +
Preference number: 5 (lower is better)
Translates to: AAAEVRKTPGALDRL*GPERRHRLTRPPRA
Trigger: GGCGCGAGGGGGCCGCGTGAGGCGGTGCCGGCGTTCTGGCCCCCAAAGCCGGTCTAGCGCGCCGGGCGTCTTCCTTACTTCCGCTGCCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CAA 90 bp TGCCCCTGCTCGTCTTCAGCCCCAACATGGGAGCTCCCTGGAGAAGACAGGTGGCGCGCTAGACCGGCTTaGGGGGCCAGAACGCCGGCA +
Preference number: 5 (lower is better)
Translates to: CPCSSSAPTWELPGEDRWRARPA*GARTPA
Trigger: TGCCGGCGTTCTGGCCCCCAAAGCCGGTCTAGCGCG...CCACCTGTCTTCTCCAGGGAGCTCCCATGTTGGGGCTGAAGACGAGCAGGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CAA 90 bp TGCCGAGGCAACTCACAGGCCTGTGGGAGACCCCGGGCGTCCTCAAAGGAGGGGCCAGGGCCTACCTTGTaGCCAGGAAGCCGCACTGCT +
Preference number: 5 (lower is better)
Translates to: CRGNSQACGRPRASSKEGPGPTL*PGSRTA
Trigger: AGCAGTGCGGCTTCCTGGCAACAAGGTAGGCCCTGG...CCCCTCCTTTGAGGACGCCCGGGGTCTCCCACAGGCCTGTGAGTTGCCTCGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CAA 90 bp TGCCCCTGCTCGTCTTCAGCCCCAACATGGGAGCTCCCTGGAGAAGACAGGTGGAAGGTAGAGGCCGCCTaGAAGCGAAGCCTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: CPCSSSAPTWELPGEDRWKVEAA*KRSLAP
Trigger: GGGAGCCAGGCTTCGCTTCAAGGCGGCCTCTACCTT...CCACCTGTCTTCTCCAGGGAGCTCCCATGTTGGGGCTGAAGACGAGCAGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CAA 90 bp CCAGGGCCTACCTTGTTGCCAGGAAGCCGCACTGCTGGAGGCTACCTGGGCGCTCACTGGTGGTGCATGTaGTCACACCGCAGCCATTCA +
Preference number: 5 (lower is better)
Translates to: PGPTLLPGSRTAGGYLGAHWWCM*SHRSHS
Trigger: TGAATGGCTGCGGTGTGACAACATGCACCACCAGTG...AGCGCCCAGGTAGCCTCCAGCAGTGCGGCTTCCTGGCAACAAGGTAGGCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CAA 90 bp CCAGGGCCTACCTTGTTGCCAGGAAGCCGCACTGCTGGAGGCTACCTGGGCGCTTCACTTCCGGCATGGTaGTCAGGAACAGAAACTCCT +
Preference number: 5 (lower is better)
Translates to: PGPTLLPGSRTAGGYLGASLPAW*SGTETP
Trigger: AGGAGTTTCTGTTCCTGACAACCATGCCGGAAGTGA...AGCGCCCAGGTAGCCTCCAGCAGTGCGGCTTCCTGGCAACAAGGTAGGCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CAA 90 bp GAAGCCACCCTGACTAGCCAGGAGAACCTCAGGGGCATCCCCTTCCTTAACACCGGTTCTTGGTTCCTCTaGTCACCTACTGGAGCGGCG +
Preference number: 5 (lower is better)
Translates to: EATLTSQENLRGIPFLNTGSWFL*SPTGAA
Trigger: CGCCGCTCCAGTAGGTGACAAGAGGAACCAAGAACC...GGTGTTAAGGAAGGGGATGCCCCTGAGGTTCTCCTGGCTAGTCAGGGTGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CAA 90 bp GAAGCCACCCTGACTAGCCAGGAGAACCTCAGGGGCATCCCCTTCCTTAACACCCGGTCCAGGACAAACTaGGAGACAGGAGTGTGCGAG +
Preference number: 5 (lower is better)
Translates to: EATLTSQENLRGIPFLNTRSRTN*ETGVCE
Trigger: CTCGCACACTCCTGTCTCCAAGTTTGTCCTGGACCG...GGTGTTAAGGAAGGGGATGCCCCTGAGGTTCTCCTGGCTAGTCAGGGTGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS-3UTR CAA 90 bp CAGAGTCCTGGGTGCTGTTCCTGCAACCCACCAGTGATGGGTGAAGCCACCCTGTTCTTCCACTGGGTGTaGCCCACTTTGGGAGTCTGG +
Preference number: 5 (lower is better)
Translates to: QSPGCCSCNPPVMGEATLFFHWV*PTLGVW
Trigger: CCAGACTCCCAAAGTGGGCAACACCCAGTGGAAGAA...CAGGGTGGCTTCACCCATCACTGGTGGGTTGCAGGAACAGCACCCAGGACTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS CCA 90 bp TCACAGGAACCAGGCATCTGCCAAGCTGCCTGGGTTTTCTCCGGATaGCTCGCAAACCACCCTCAGGTGCCCGTGTATAAGGCTTCGTGT +
Preference number: 5 (lower is better)
Translates to: SQEPGICQAAWVFSG*LANHPQVPVYKASC
Trigger: ACACGAAGCCTTATACACGGGCACCTGAGGGTGGTTTGCGAGCCATCCGGAGAAAACCCAGGCAGCTTGGCAGATGCCTGGTTCCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485085.5
CDS-3UTR CAA 90 bp CCACAATTGTCGCAGCACCAAGATGAAGGCCAGAGGTGCCGTTTTACTCCTCAGGCACCAGGGCCTACCTaGTTGCCAGGAAGCCGCACT +
Preference number: 5 (lower is better)
Translates to: PQLSQHQDEGQRCRFTPQAPGPT*LPGSRT
Trigger: AGTGCGGCTTCCTGGCAACAAGGTAGGCCCTGGTGC...CTGAGGAGTAAAACGGCACCTCTGGCCTTCATCTTGGTGCTGCGACAATTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS TCA 90 bp GGTCTTCTGCAGCCTGGGGCTCACATTTCCTTGCTGTGTTTCCCCTaGACTGAGGTTCTTGGTTCCTCTTGTCACGGGATGTGGCTCGCC +
Preference number: 5 (lower is better)
Translates to: GLLQPGAHISLLCFP*TEVLGSSCHGMWLA
Trigger: GGCGAGCCACATCCCGTGACAAGAGGAACCAAGAACCTCAGTTCAGGGGAAACACAGCAAGGAAATGTGAGCCCCAGGCTGCAGAAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421474.5
CDS GCA 90 bp AAGCTGCCTGGGTTTTCTCCGGATGGCTCGCAAACCACCCTCAGGTaGCCGTGTATAAGGCTTCGTGTGTTTCCTGGGGTCACCAATAGG +
Preference number: 5 (lower is better)
Translates to: KLPGFSPDGSQTTLR*PCIRLRVFPGVTNR
Trigger: CCTATTGGTGACCCCAGGAAACACACGAAGCCTTATACACGGGCACCTGAGGGTGGTTTGCGAGCCATCCGGAGAAAACCCAGGCAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485085.5
CDS CCA 90 bp TTCCAGGCGCTCCATGTAGACCAGGGGCTGAACGAGCTGGCTGTCTaGAAGCTCCTTCCCAGTTGGCTTCAGTTCCTCAGGAATGTGCTT +
Preference number: 5 (lower is better)
Translates to: FQALHVDQGLNELAV*KLLPSWLQFLRNVL
Trigger: AAGCACATTCCTGAGGAACTGAAGCCAACTGGGAAGGAGCTTCCAGACAGCCAGCTCGTTCAGCCCCTGGTCTACATGGAGCGCCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264249.8
ENST00000409046.5
ENST00000409701.5
ENST00000420858.5
ENST00000448989.5
CDS-3UTR CAA 90 bp TGCCCCTGCTCGTCTTCAGCCCCAACATGGGAGCTCCCTGGAGAAGACAGGTGGCACAGAAAGAATGCTTaGCCTCCACAATTGTCGCAG +
Preference number: 5 (lower is better)
Translates to: CPCSSSAPTWELPGEDRWHRKNA*PPQLSQ
Trigger: CTGCGACAATTGTGGAGGCAAAGCATTCTTTCTGTG...CCACCTGTCTTCTCCAGGGAGCTCCCATGTTGGGGCTGAAGACGAGCAGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS TCA 90 bp TTCCTTCTGCAGCCTGGGGCTCACATTTCCTTGCTGTGTTTCCCCTaGACTGAGGTTCTTGGTTCCTCTTGTCACGGGATGTGGCTCGCC +
Preference number: 5 (lower is better)
Translates to: FLLQPGAHISLLCFP*TEVLGSSCHGMWLA
Trigger: GGCGAGCCACATCCCGTGACAAGAGGAACCAAGAACCTCAGTTCAGGGGAAACACAGCAAGGAAATGTGAGCCCCAGGCTGCAGAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409046.5
CDS TCA 90 bp GCAGAAGCCACTGGTGGTGCATGTTGTCACACCGCAGCCATTCACTaGCTCTTCCTGGCCTGGTGCAGACCCCCAGTAAAAACTGACCAA +
Preference number: 5 (lower is better)
Translates to: AEATGGACCHTAAIH*LFLAWCRPPVKTDQ
Trigger: TTGGTCAGTTTTTACTGGGGGTCTGCACCAGGCCAGGAAGAGTCAGTGAATGGCTGCGGTGTGACAACATGCACCACCAGTGGCTTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000421474.5
CDS GCA 90 bp AGGTTCTTGGTTCCTCTTGTCACTTCCCAGCCAGAAGTGCAGAACTaGATGCCTCAACCTCCAACTTCGGACAGGCCTCCTGACAGCGAA +
Preference number: 5 (lower is better)
Translates to: RFLVPLVTSQPEVQN*MPQPPTSDRPPDSE
Trigger: TTCGCTGTCAGGAGGCCTGTCCGAAGTTGGAGGTTGAGGCATGCAGTTCTGCACTTCTGGCTGGGAAGTGACAAGAGGAACCAAGAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409701.5
CDS GCA 90 bp ATGAAAATCACCCAAAAGCATGCGGCCAGCAGAAGCCACTGGTGGTaGATGTTGTCACACCGCAGCCATTCACTGACTCTTCCTGGCCTG +
Preference number: 5 (lower is better)
Translates to: MKITQKHAASRSHWW*MLSHRSHSLTLPGL
Trigger: CAGGCCAGGAAGAGTCAGTGAATGGCTGCGGTGTGACAACATGCACCACCAGTGGCTTCTGCTGGCCGCATGCTTTTGGGTGATTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421474.5
CDS GCA 90 bp ATAATTCCGCGGGTCACAGCATCCCGCACAAGGACGCCTTCTTATTaGATAATTAACGCGAGGAAGGCTCTTCCCGCTACTCCCGCGAAC +
Preference number: 5 (lower is better)
Translates to: IIPRVTASRTRTPSY*IINARKALPATPAN
Trigger: GTTCGCGGGAGTAGCGGGAAGAGCCTTCCTCGCGTTAATTATGCAATAAGAAGGCGTCCTTGTGCGGGATGCTGTGACCCGCGGAATTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466583.1
CDS-3UTR CAA 90 bp GAAGCCACCCTGACTAGCCAGGAGAACCTCAGGGGCATCCCCTTCCTTAACACCGTCAACGTGATGAACTaGCTAGCCACCATGAACATG +
Preference number: 5 (lower is better)
Translates to: EATLTSQENLRGIPFLNTVNVMN*LATMNM
Trigger: CATGTTCATGGTGGCTAGCAAGTTCATCACGTTGAC...GGTGTTAAGGAAGGGGATGCCCCTGAGGTTCTCCTGGCTAGTCAGGGTGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS TCA 90 bp AGTCCCCTTCGAAACGGGCATACAGGCGTCGGATGTCTCGTTTGCTaGTGCCCAGGAAATAGTGCTCCACCTTGGTTCTGTTATACACGG +
Preference number: 5 (lower is better)
Translates to: SPLRNGHTGVGCLVC*CPGNSAPPWFCYTR
Trigger: CCGTGTATAACAGAACCAAGGTGGAGCACTATTTCCTGGGCATCAGCAAACGAGACATCCGACGCCTGTATGCCCGTTTCGAAGGGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264249.8
ENST00000409701.5
CDS GCA 90 bp CATTTTGGAAAACCTGGTTCACCTTCCCAGCCAGAAGTGCAGAACTaGATGCCTCAACCTCCAACTTCGGACAGGCCTCCTGACAGCGAA +
Preference number: 5 (lower is better)
Translates to: HFGKPGSPSQPEVQN*MPQPPTSDRPPDSE
Trigger: TTCGCTGTCAGGAGGCCTGTCCGAAGTTGGAGGTTGAGGCATGCAGTTCTGCACTTCTGGCTGGGAAGGTGAACCAGGTTTTCCAAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435960.5
CDS CCA 90 bp AACATGAAAATCACCCAAAAGCATGCGGCCAGCAGAAGCCACTGGTaGTGCATGTTGTCACACCGCAGCCATTCACTGACTCTTCCTGGC +
Preference number: 5 (lower is better)
Translates to: NMKITQKHAASRSHW*CMLSHRSHSLTLPG
Trigger: GCCAGGAAGAGTCAGTGAATGGCTGCGGTGTGACAACATGCACCACCAGTGGCTTCTGCTGGCCGCATGCTTTTGGGTGATTTTCATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421474.5
CDS-3UTR CAA 90 bp CCACAATTGTCGCAGCACCAAGATGAAGGCCAGAGGTGCCGTTTTACTCCTCAGTGGGTGTTGCCCACTTaGGGAGTCTGGCAGAAAAGA +
Preference number: 5 (lower is better)
Translates to: PQLSQHQDEGQRCRFTPQWVLPT*GVWQKR
Trigger: TCTTTTCTGCCAGACTCCCAAAGTGGGCAACACCCA...CTGAGGAGTAAAACGGCACCTCTGGCCTTCATCTTGGTGCTGCGACAATTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS TCA 90 bp TTCCTTCTGCAGCCTGGGGCTCACATTTCCTTGCTGTGTTTCCCCTaGACTGAGGTTCTTGGTTCCTCTTGTCACGAAGCTGCACATGCT +
Preference number: 5 (lower is better)
Translates to: FLLQPGAHISLLCFP*TEVLGSSCHEAAHA
Trigger: AGCATGTGCAGCTTCGTGACAAGAGGAACCAAGAACCTCAGTTCAGGGGAAACACAGCAAGGAAATGTGAGCCCCAGGCTGCAGAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448989.5
CDS GCA 90 bp CCATTCACTGACTCTTCCTTCTGCAGCCTGGGGCTCACATTTCCTTaGTGTGTTTCCCCTGAACTGAGGTTCTTGGTTCCTCTTGTCACC +
Preference number: 5 (lower is better)
Translates to: PFTDSSFCSLGLTFP*CVSPELRFLVPLVT
Trigger: GGTGACAAGAGGAACCAAGAACCTCAGTTCAGGGGAAACACAGCAAGGAAATGTGAGCCCCAGGCTGCAGAAGGAAGAGTCAGTGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264249.8
ENST00000484382.5
CDS GCA 90 bp ATGAAAATCACCCAAAAGCATGCGGCCAGCAGAAGCCACTGGTGGTaGATGTTGTCACACCGCAGCCATTCACTGACTCTTCCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: MKITQKHAASRSHWW*MLSHRSHSLTLPSA
Trigger: TGCAGAAGGAAGAGTCAGTGAATGGCTGCGGTGTGACAACATGCACCACCAGTGGCTTCTGCTGGCCGCATGCTTTTGGGTGATTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264249.8
ENST00000409046.5
ENST00000409701.5
ENST00000418201.5
ENST00000420858.5
ENST00000435960.5
ENST00000448989.5
ENST00000484382.5
CDS GCA 90 bp CCATTCACTGACTCTTCCTTCTGCAGCCTGGGGCTCACATTTCCTTaGTGTGTTTCCCCTGAACTGAGGTTCTTGGTTCCTCTTGTCACG +
Preference number: 5 (lower is better)
Translates to: PFTDSSFCSLGLTFP*CVSPELRFLVPLVT
Trigger: CGTGACAAGAGGAACCAAGAACCTCAGTTCAGGGGAAACACAGCAAGGAAATGTGAGCCCCAGGCTGCAGAAGGAAGAGTCAGTGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409046.5
ENST00000435960.5
ENST00000448989.5
CDS CCA 90 bp CCAGCCTCTTTTAAGATGTATGGGGCATCGTCCTCCAGGGTCTCGTaGTGTCCAATCACACTGTACATTATCTCACAGGGAGCACAGAGC +
Preference number: 5 (lower is better)
Translates to: PASFKMYGASSSRVS*CPITLYIISQGAQS
Trigger: GCTCTGTGCTCCCTGTGAGATAATGTACAGTGTGATTGGACACCACGAGACCCTGGAGGACGATGCCCCATACATCTTAAAAGAGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264249.8
ENST00000409701.5
CDS CCA 90 bp TTATACACGGTAATGCCCGGAGGGATAGTCGGGTATGACACCAGGTaGTCAATGCCAGCCTCTTTTAAGATGTATGGGGCATCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: LYTVMPGGIVGYDTR*SMPASFKMYGASSS
Trigger: GGAGGACGATGCCCCATACATCTTAAAAGAGGCTGGCATTGACCACCTGGTGTCATACCCGACTATCCCTCCGGGCATTACCGTGTATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264249.8
ENST00000409701.5
CDS-3UTR CAA 90 bp CCACAATTGTCGCAGCACCAAGATGAAGGCCAGAGGTGCCGTTTTACTCCTCAGCCTGAACTGAGGTTCTaGGTTCCTCTTGTCACCTAC +
Preference number: 5 (lower is better)
Translates to: PQLSQHQDEGQRCRFTPQPELRF*VPLVTY
Trigger: GTAGGTGACAAGAGGAACCAAGAACCTCAGTTCAGG...CTGAGGAGTAAAACGGCACCTCTGGCCTTCATCTTGGTGCTGCGACAATTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS TCA 90 bp TTCCTTCTGCAGCCTGGGGCTCACATTTCCTTGCTGTGTTTCCCCTaGACTGAGGTTCTTGGTTCCTCTTGTCACGTTATGACAGTCCTG +
Preference number: 5 (lower is better)
Translates to: FLLQPGAHISLLCFP*TEVLGSSCHVMTVL
Trigger: CAGGACTGTCATAACGTGACAAGAGGAACCAAGAACCTCAGTTCAGGGGAAACACAGCAAGGAAATGTGAGCCCCAGGCTGCAGAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435960.5
CDS GCA 90 bp CCATTCACTGACTCTTCCTTCTGCAGCCTGGGGCTCACATTTCCTTaGTGTGTTTCCCCTGAACTGAGGTTCTTGGTTCCTCTTGTCACT +
Preference number: 5 (lower is better)
Translates to: PFTDSSFCSLGLTFP*CVSPELRFLVPLVT
Trigger: AGTGACAAGAGGAACCAAGAACCTCAGTTCAGGGGAAACACAGCAAGGAAATGTGAGCCCCAGGCTGCAGAAGGAAGAGTCAGTGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409701.5
ENST00000418201.5
ENST00000420858.5
CDS CCA 90 bp AACATGAAAATCACCCAAAAGCATGCGGCCAGCAGAAGCCACTGGTaGTGCATGTTGTCACACCGCAGCCATTCACTGACTCTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: NMKITQKHAASRSHW*CMLSHRSHSLTLPS
Trigger: AGAAGGAAGAGTCAGTGAATGGCTGCGGTGTGACAACATGCACCACCAGTGGCTTCTGCTGGCCGCATGCTTTTGGGTGATTTTCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264249.8
ENST00000409046.5
ENST00000409701.5
ENST00000418201.5
ENST00000420858.5
ENST00000435960.5
ENST00000448989.5
ENST00000484382.5
CDS CCA 90 bp ATGAACATGAAAATCACCCAAAAGCATGCGGCCAGCAGAAGCCACTaGTGGTGCATGTTGTCACACCGCAGCCATTCACTGACTCTTCCT +
Preference number: 5 (lower is better)
Translates to: MNMKITQKHAASRSH*WCMLSHRSHSLTLP
Trigger: AGGAAGAGTCAGTGAATGGCTGCGGTGTGACAACATGCACCACCAGTGGCTTCTGCTGGCCGCATGCTTTTGGGTGATTTTCATGTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000264249.8
ENST00000409046.5
ENST00000409701.5
ENST00000418201.5
ENST00000420858.5
ENST00000421474.5
ENST00000435960.5
ENST00000448989.5
ENST00000484382.5
CDS CCA 90 bp CTCCTTCCCAGTTGGCTTCAGTTCCTCAGGAATGTGCTTCTCTTCTaGCAACTTCCTCACTTCCGGCATGGTTGTCAGGAACAGAAACTC +
Preference number: 5 (lower is better)
Translates to: LLPSWLQFLRNVLLF*QLPHFRHGCQEQKL
Trigger: GAGTTTCTGTTCCTGACAACCATGCCGGAAGTGAGGAAGTTGCCAGAAGAGAAGCACATTCCTGAGGAACTGAAGCCAACTGGGAAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264249.8
ENST00000409046.5
ENST00000409701.5
ENST00000420858.5
ENST00000421474.5
ENST00000448989.5
CDS-3UTR CAA 90 bp AGAAAGAATGCTTTGCCTCCACAATTGTCGCAGCACCAAGATGAAGGCCAGAGGGAAGCTCCTTCCCAGTaGGCTTCAGTTCCTCAGGAA +
Preference number: 5 (lower is better)
Translates to: RKNALPPQLSQHQDEGQREAPSQ*ASVPQE
Trigger: TTCCTGAGGAACTGAAGCCAACTGGGAAGGAGCTTC...CCTCTGGCCTTCATCTTGGTGCTGCGACAATTGTGGAGGCAAAGCATTCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS TCA 90 bp TTATCTCACAGGGAGCACAGAGCTCTACATACGTCACCCAGTGAATaGTGTGGTCCCCAAACTGAAGGTCTAGCCATCTGTGGTTCGGAT +
Preference number: 5 (lower is better)
Translates to: LSHREHRALHTSPSE*CGPQTEGLAICGSD
Trigger: ATCCGAACCACAGATGGCTAGACCTTCAGTTTGGGGACCACATCATTCACTGGGTGACGTATGTAGAGCTCTGTGCTCCCTGTGAGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264249.8
ENST00000409701.5
CDS CCA 90 bp CCTCAGGAATGTGCTTCTCTTCTGGCAACTTCCTCACTTCCGGCATaGTTGTCAGGAACAGAAACTCCTGTTTGGCACTGTACACATCTG +
Preference number: 5 (lower is better)
Translates to: PQECASLLATSSLPA*LSGTETPVWHCTHL
Trigger: CAGATGTGTACAGTGCCAAACAGGAGTTTCTGTTCCTGACAACCATGCCGGAAGTGAGGAAGTTGCCAGAAGAGAAGCACATTCCTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264249.8
ENST00000409046.5
ENST00000409701.5
ENST00000418201.5
ENST00000420858.5
ENST00000421474.5
ENST00000448989.5
CDS-3UTR CAA 90 bp AGAAAGAATGCTTTGCCTCCACAATTGTCGCAGCACCAAGATGAAGGCCAGAGGGCTTTGCCTCCACAATaGTCGCAGCACCAAGATGAA +
Preference number: 5 (lower is better)
Translates to: RKNALPPQLSQHQDEGQRALPPQ*SQHQDE
Trigger: TTCATCTTGGTGCTGCGACAATTGTGGAGGCAAAGC...CCTCTGGCCTTCATCTTGGTGCTGCGACAATTGTGGAGGCAAAGCATTCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS CCA 90 bp GAATCTTGTGCTTGTCACAGACAAATATTCGGTCCAGGACAAACTTaGAGACAGGAGTGTGCGAGAGATTCTTCAGGGCATCATCCCTGC +
Preference number: 5 (lower is better)
Translates to: ESCACHRQIFGPGQT*RQECARDSSGHHPC
Trigger: GCAGGGATGATGCCCTGAAGAATCTCTCGCACACTCCTGTCTCCAAGTTTGTCCTGGACCGAATATTTGTCTGTGACAAGCACAAGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264249.8
ENST00000409046.5
ENST00000409701.5
ENST00000420858.5
ENST00000484382.5
CDS-3UTR CAA 90 bp TGGGCCATGGTCCTTTTAAGGCCCTCAAAGACACTCCCCTTCTCAGGTAGAAAAAACAGAAACTCCTGTTaGGCACTGTACACATCTGGG +
Preference number: 5 (lower is better)
Translates to: WAMVLLRPSKTLPFSGRKNRNSC*ALYTSG
Trigger: CCCAGATGTGTACAGTGCCAAACAGGAGTTTCTGTT...TTTTCTACCTGAGAAGGGGAGTGTCTTTGAGGGCCTTAAAAGGACCATGGCCCA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS GCA 90 bp CACTGGGTGTTGCCCACTTTGGGAGTCTGGCAGAAAAGAATCTTGTaGTTGTCACAGACAAATATTCGGTCCAGGACAAACTTGGAGACA +
Preference number: 5 (lower is better)
Translates to: HWVLPTLGVWQKRIL*LSQTNIRSRTNLET
Trigger: TGTCTCCAAGTTTGTCCTGGACCGAATATTTGTCTGTGACAAGCACAAGATTCTTTTCTGCCAGACTCCCAAAGTGGGCAACACCCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264249.8
ENST00000409046.5
ENST00000409701.5
ENST00000484382.5
CDS-3UTR CAA 90 bp CCACAATTGTCGCAGCACCAAGATGAAGGCCAGAGGTGCCGTTTTACTCCTCAGTGGCAGAAAAGAATCTaGTGCTTGTCACAGACAAAT +
Preference number: 5 (lower is better)
Translates to: PQLSQHQDEGQRCRFTPQWQKRI*CLSQTN
Trigger: ATTTGTCTGTGACAAGCACAAGATTCTTTTCTGCCA...CTGAGGAGTAAAACGGCACCTCTGGCCTTCATCTTGGTGCTGCGACAATTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS CCA 90 bp ACAATCAGCACTTTCTTCCACTGGGTGTTGCCCACTTTGGGAGTCTaGCAGAAAAGAATCTTGTGCTTGTCACAGACAAATATTCGGTCC +
Preference number: 5 (lower is better)
Translates to: TISTFFHWVLPTLGV*QKRILCLSQTNIRS
Trigger: GGACCGAATATTTGTCTGTGACAAGCACAAGATTCTTTTCTGCCAGACTCCCAAAGTGGGCAACACCCAGTGGAAGAAAGTGCTGATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264249.8
ENST00000409046.5
ENST00000409701.5
ENST00000484382.5
CDS CCA 90 bp ATGGAAGAAAATGCTCCATTTAGAACAATCAGCACTTTCTTCCACTaGGTGTTGCCCACTTTGGGAGTCTGGCAGAAAAGAATCTTGTGC +
Preference number: 5 (lower is better)
Translates to: MEENAPFRTISTFFH*VLPTLGVWQKRILC
Trigger: GCACAAGATTCTTTTCTGCCAGACTCCCAAAGTGGGCAACACCCAGTGGAAGAAAGTGCTGATTGTTCTAAATGGAGCATTTTCTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264249.8
ENST00000409701.5
CDS-3UTR CAA 90 bp TGGGCCATGGTCCTTTTAAGGCCCTCAAAGACACTCCCCTTCTCAGGTAGAAAAAAAAGAATCTTGTGCTaGTCACAGACAAATATTCGG +
Preference number: 5 (lower is better)
Translates to: WAMVLLRPSKTLPFSGRKKRILC*SQTNIR
Trigger: CCGAATATTTGTCTGTGACAAGCACAAGATTCTTTT...TTTTCTACCTGAGAAGGGGAGTGTCTTTGAGGGCCTTAAAAGGACCATGGCCCA
44% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS TCA 90 bp CCAGGAGCAATCTCATGCCTGTACCAAGGCTCAAACCGGGGATTGTaGACAAATTTATCCTTAAATGCAGAAATAAGTCTTTCGAAGGGA +
Preference number: 5 (lower is better)
Translates to: PGAISCLYQGSNRGL*TNLSLNAEISLSKG
Trigger: TCCCTTCGAAAGACTTATTTCTGCATTTAAGGATAAATTTGTTCACAATCCCCGGTTTGAGCCTTGGTACAGGCATGAGATTGCTCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264249.8
ENST00000409701.5
CDS CAA 90 bp GGCGGCAGCGGAAGTAAGGAAGACGCCCGGCGCGCTAGACCGGCTTaGGGGGCCAGAACGCCGGCACCGCCTCACGCGGCCCCCTCGCGC +
Preference number: 6 (lower is better)
Translates to: GGSGSKEDARRARPA*GARTPAPPHAAPSR
Trigger: GCGCGAGGGGGCCGCGTGAGGCGGTGCCGGCGTTCTGGCCCCCAAAGCCGGTCTAGCGCGCCGGGCGTCTTCCTTACTTCCGCTGCCGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS CCA 72 bp GAAGTAAGGAAGACGCCCGGCGCGCTAGACCGGCTTTaGGGGCCAGAACGCCGGCACCGCCTCACGCGGCCC +
Preference number: 6 (lower is better)
Translates to: EVRKTPGALDRL*GPERRHRLTRP
Trigger: GGGCCGCGTGAGGCGGTGCCGGCGTTCTGGCCCCCAAAGCCGGTCTAGCGCGCCGGGCGTCTTCCTTACTTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS CAA 72 bp GGAAGTAAGGAAGACGCCCGGCGCGCTAGACCGGCTTaGGGGGCCAGAACGCCGGCACCGCCTCACGCGGCC +
Preference number: 6 (lower is better)
Translates to: GSKEDARRARPA*GARTPAPPHAA
Trigger: GGCCGCGTGAGGCGGTGCCGGCGTTCTGGCCCCCAAAGCCGGTCTAGCGCGCCGGGCGTCTTCCTTACTTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264249.8
CDS CCA 72 bp CCAGGCATCTGCCAAGCTGCCTGGGTTTTCTCCGGATaGCTCGCAAACCACCCTCAGGTGCCCGTGTATAAG +
Preference number: 6 (lower is better)
Translates to: PGICQAAWVFSG*LANHPQVPVYK
Trigger: CTTATACACGGGCACCTGAGGGTGGTTTGCGAGCCATCCGGAGAAAACCCAGGCAGCTTGGCAGATGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485085.5
CDS CAA 90 bp ATCACCCAAAAGCATGCGGCCAGCAGAAGCCACTGGTGGTGCATGTaGTCACACCGCAGCCATTCACTGACTCTTCCTGGCCTGGTGCAG +
Preference number: 6 (lower is better)
Translates to: ITQKHAASRSHWWCM*SHRSHSLTLPGLVQ
Trigger: CTGCACCAGGCCAGGAAGAGTCAGTGAATGGCTGCGGTGTGACAACATGCACCACCAGTGGCTTCTGCTGGCCGCATGCTTTTGGGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421474.5
CDS GCA 72 bp CAGCAACACCACCCAGCAGGGGCATGCCAAATTCCTTaGAAGCCAGCTGTCCTGTCTCCTGTCTCCATCCCA +
Preference number: 6 (lower is better)
Translates to: QQHHPAGACQIP*KPAVLSPVSIP
Trigger: TGGGATGGAGACAGGAGACAGGACAGCTGGCTTGCAAGGAATTTGGCATGCCCCTGCTGGGTGGTGTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487860.1
CDS GCA 72 bp GGGTTTTCTCCGGATGGCTCGCAAACCACCCTCAGGTaGCCGTGTATAAGGCTTCGTGTGTTTCCTGGGGTC +
Preference number: 6 (lower is better)
Translates to: GFSPDGSQTTLR*PCIRLRVFPGV
Trigger: GACCCCAGGAAACACACGAAGCCTTATACACGGGCACCTGAGGGTGGTTTGCGAGCCATCCGGAGAAAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485085.5
CDS CCA 72 bp CTCCATGTAGACCAGGGGCTGAACGAGCTGGCTGTCTaGAAGCTCCTTCCCAGTTGGCTTCAGTTCCTCAGG +
Preference number: 6 (lower is better)
Translates to: LHVDQGLNELAV*KLLPSWLQFLR
Trigger: CCTGAGGAACTGAAGCCAACTGGGAAGGAGCTTCCAGACAGCCAGCTCGTTCAGCCCCTGGTCTACATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264249.8
ENST00000409046.5
ENST00000409701.5
ENST00000420858.5
ENST00000421474.5
ENST00000448989.5
CDS CAA 72 bp AAGCATGCGGCCAGCAGAAGCCACTGGTGGTGCATGTaGTCACACCGCAGCCATTCACTGACTCTTCCTGGC +
Preference number: 6 (lower is better)
Translates to: KHAASRSHWWCM*SHRSHSLTLPG
Trigger: GCCAGGAAGAGTCAGTGAATGGCTGCGGTGTGACAACATGCACCACCAGTGGCTTCTGCTGGCCGCATGCTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421474.5
CDS CAA 90 bp ATCACCCAAAAGCATGCGGCCAGCAGAAGCCACTGGTGGTGCATGTaGTCACACCGCAGCCATTCACTGACTCTTCCTTCTGCAGCCTGG +
Preference number: 6 (lower is better)
Translates to: ITQKHAASRSHWWCM*SHRSHSLTLPSAAW
Trigger: CCAGGCTGCAGAAGGAAGAGTCAGTGAATGGCTGCGGTGTGACAACATGCACCACCAGTGGCTTCTGCTGGCCGCATGCTTTTGGGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264249.8
ENST00000409046.5
ENST00000409701.5
ENST00000418201.5
ENST00000420858.5
ENST00000435960.5
ENST00000448989.5
ENST00000484382.5
CDS GCA 72 bp CTGGTTCACCTTCCCAGCCAGAAGTGCAGAACTGCATaGCTCAACCTCCAACTTCGGACAGGCCTCCTGACA +
Preference number: 6 (lower is better)
Translates to: LVHLPSQKCRTA*LNLQLRTGLLT
Trigger: TGTCAGGAGGCCTGTCCGAAGTTGGAGGTTGAGGCATGCAGTTCTGCACTTCTGGCTGGGAAGGTGAACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435960.5
CDS CCA 72 bp CTGAAGGAAGAGAGCCGAGGAAGGCCGTTCTTCTCGTaGTCGTGCACCACGTTTTCGGGGATCTCCTCAATG +
Preference number: 6 (lower is better)
Translates to: LKEESRGRPFFS*SCTTFSGISSM
Trigger: CATTGAGGAGATCCCCGAAAACGTGGTGCACGACCACGAGAAGAACGGCCTTCCTCGGCTCTCTTCCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264249.8
ENST00000409701.5
CDS TCA 72 bp ACTGGTGGTGCATGTTGTCACACCGCAGCCATTCACTaGCTCTTCCTGGCCTGGTGCAGACCCCCAGTAAAA +
Preference number: 6 (lower is better)
Translates to: TGGACCHTAAIH*LFLAWCRPPVK
Trigger: TTTTACTGGGGGTCTGCACCAGGCCAGGAAGAGTCAGTGAATGGCTGCGGTGTGACAACATGCACCACCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421474.5
CDS GCA 72 bp ACCCAAAAGCATGCGGCCAGCAGAAGCCACTGGTGGTaGATGTTGTCACACCGCAGCCATTCACTGACTCTT +
Preference number: 6 (lower is better)
Translates to: TQKHAASRSHWW*MLSHRSHSLTL
Trigger: AAGAGTCAGTGAATGGCTGCGGTGTGACAACATGCACCACCAGTGGCTTCTGCTGGCCGCATGCTTTTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000264249.8
ENST00000409046.5
ENST00000409701.5
ENST00000418201.5
ENST00000420858.5
ENST00000421474.5
ENST00000435960.5
ENST00000448989.5
ENST00000484382.5
CDS GCA 72 bp GAAGAGAGCCGAGGAAGGCCGTTCTTCTCGTGGTCGTaGACCACGTTTTCGGGGATCTCCTCAATGGAAGAA +
Preference number: 6 (lower is better)
Translates to: EESRGRPFFSWS*TTFSGISSMEE
Trigger: TTCTTCCATTGAGGAGATCCCCGAAAACGTGGTGCACGACCACGAGAAGAACGGCCTTCCTCGGCTCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264249.8
ENST00000409701.5
CDS GCA 72 bp CTCTTGTCACTTCCCAGCCAGAAGTGCAGAACTGCATaGCTCAACCTCCAACTTCGGACAGGCCTCCTGACA +
Preference number: 6 (lower is better)
Translates to: LLSLPSQKCRTA*LNLQLRTGLLT
Trigger: TGTCAGGAGGCCTGTCCGAAGTTGGAGGTTGAGGCATGCAGTTCTGCACTTCTGGCTGGGAAGTGACAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409701.5
CDS GCA 72 bp GTTCCTCTTGTCACTTCCCAGCCAGAAGTGCAGAACTaGATGCCTCAACCTCCAACTTCGGACAGGCCTCCT +
Preference number: 6 (lower is better)
Translates to: VPLVTSQPEVQN*MPQPPTSDRPP
Trigger: AGGAGGCCTGTCCGAAGTTGGAGGTTGAGGCATGCAGTTCTGCACTTCTGGCTGGGAAGTGACAAGAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409701.5
CDS GCA 72 bp AAACCTGGTTCACCTTCCCAGCCAGAAGTGCAGAACTaGATGCCTCAACCTCCAACTTCGGACAGGCCTCCT +
Preference number: 6 (lower is better)
Translates to: KPGSPSQPEVQN*MPQPPTSDRPP
Trigger: AGGAGGCCTGTCCGAAGTTGGAGGTTGAGGCATGCAGTTCTGCACTTCTGGCTGGGAAGGTGAACCAGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435960.5
CDS CAA 72 bp AAGCATGCGGCCAGCAGAAGCCACTGGTGGTGCATGTaGTCACACCGCAGCCATTCACTGACTCTTCCTTCT +
Preference number: 6 (lower is better)
Translates to: KHAASRSHWWCM*SHRSHSLTLPS
Trigger: AGAAGGAAGAGTCAGTGAATGGCTGCGGTGTGACAACATGCACCACCAGTGGCTTCTGCTGGCCGCATGCTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264249.8
ENST00000409046.5
ENST00000409701.5
ENST00000418201.5
ENST00000420858.5
ENST00000435960.5
ENST00000448989.5
ENST00000484382.5
CDS CCA 72 bp AAAATCACCCAAAAGCATGCGGCCAGCAGAAGCCACTaGTGGTGCATGTTGTCACACCGCAGCCATTCACTG +
Preference number: 6 (lower is better)
Translates to: KITQKHAASRSH*WCMLSHRSHSL
Trigger: CAGTGAATGGCTGCGGTGTGACAACATGCACCACCAGTGGCTTCTGCTGGCCGCATGCTTTTGGGTGATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000264249.8
ENST00000409046.5
ENST00000409701.5
ENST00000418201.5
ENST00000420858.5
ENST00000421474.5
ENST00000435960.5
ENST00000448989.5
ENST00000484382.5
CDS GCA 72 bp GACTCTTCCTTCTGCAGCCTGGGGCTCACATTTCCTTaGTGTGTTTCCCCTGAACTGAGGTTCTTGGTTCCT +
Preference number: 6 (lower is better)
Translates to: DSSFCSLGLTFP*CVSPELRFLVP
Trigger: AGGAACCAAGAACCTCAGTTCAGGGGAAACACAGCAAGGAAATGTGAGCCCCAGGCTGCAGAAGGAAGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264249.8
ENST00000409046.5
ENST00000409701.5
ENST00000418201.5
ENST00000420858.5
ENST00000435960.5
ENST00000448989.5
ENST00000484382.5
CDS GCA 72 bp AGCTCCTTCCCAGTTGGCTTCAGTTCCTCAGGAATGTaGTTCTCTTCTGGCAACTTCCTCACTTCCGGCATG +
Preference number: 6 (lower is better)
Translates to: SSFPVGFSSSGM*FSSGNFLTSGM
Trigger: CATGCCGGAAGTGAGGAAGTTGCCAGAAGAGAAGCACATTCCTGAGGAACTGAAGCCAACTGGGAAGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264249.8
ENST00000409046.5
ENST00000409701.5
ENST00000420858.5
ENST00000421474.5
ENST00000448989.5
CDS GCA 72 bp AGTAGGGTCTTCTGCAGCCTGGGGCTCACATTTCCTTaGTGTGTTTCCCCTGAACTGAGGTTCTTGGTTCCT +
Preference number: 6 (lower is better)
Translates to: SRVFCSLGLTFP*CVSPELRFLVP
Trigger: AGGAACCAAGAACCTCAGTTCAGGGGAAACACAGCAAGGAAATGTGAGCCCCAGGCTGCAGAAGACCCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421474.5
ENST00000485085.5
ENST00000487860.1
CDS CCA 72 bp CGTTATGACAGTCCTGCCGCTGAGCTAACCAGAACCTaGCTGCACTACTTTCCATTCACTGCCCAACCCTTT +
Preference number: 6 (lower is better)
Translates to: RYDSPAAELTRT*LHYFPFTAQPF
Trigger: AAAGGGTTGGGCAGTGAATGGAAAGTAGTGCAGCCAGGTTCTGGTTAGCTCAGCGGCAGGACTGTCATAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435960.5
CDS TCA 72 bp AGGGAGCACAGAGCTCTACATACGTCACCCAGTGAATaGTGTGGTCCCCAAACTGAAGGTCTAGCCATCTGT +
Preference number: 6 (lower is better)
Translates to: REHRALHTSPSE*CGPQTEGLAIC
Trigger: ACAGATGGCTAGACCTTCAGTTTGGGGACCACATCATTCACTGGGTGACGTATGTAGAGCTCTGTGCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264249.8
ENST00000409701.5
CDS CAA 90 bp CAGGAATGTGCTTCTCTTCTGGCAACTTCCTCACTTCCGGCATGGTaGTCAGGAACAGAAACTCCTGTTTGGCACTGTACACATCTGGGT +
Preference number: 6 (lower is better)
Translates to: QECASLLATSSLPAW*SGTETPVWHCTHLG
Trigger: ACCCAGATGTGTACAGTGCCAAACAGGAGTTTCTGTTCCTGACAACCATGCCGGAAGTGAGGAAGTTGCCAGAAGAGAAGCACATTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264249.8
ENST00000409046.5
ENST00000409701.5
ENST00000418201.5
ENST00000420858.5
ENST00000421474.5
ENST00000448989.5
CDS CCA 72 bp TGTGCTTCTCTTCTGGCAACTTCCTCACTTCCGGCATaGTTGTCAGGAACAGAAACTCCTGTTTGGCACTGT +
Preference number: 6 (lower is better)
Translates to: CASLLATSSLPA*LSGTETPVWHC
Trigger: ACAGTGCCAAACAGGAGTTTCTGTTCCTGACAACCATGCCGGAAGTGAGGAAGTTGCCAGAAGAGAAGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264249.8
ENST00000409046.5
ENST00000409701.5
ENST00000418201.5
ENST00000420858.5
ENST00000421474.5
ENST00000448989.5
CDS CCA 72 bp AGTTGGCTTCAGTTCCTCAGGAATGTGCTTCTCTTCTaGCAACTTCCTCACTTCCGGCATGGTTGTCAGGAA +
Preference number: 6 (lower is better)
Translates to: SWLQFLRNVLLF*QLPHFRHGCQE
Trigger: TTCCTGACAACCATGCCGGAAGTGAGGAAGTTGCCAGAAGAGAAGCACATTCCTGAGGAACTGAAGCCAACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264249.8
ENST00000409046.5
ENST00000409701.5
ENST00000420858.5
ENST00000421474.5
ENST00000448989.5
CDS CAA 72 bp GCTTCTCTTCTGGCAACTTCCTCACTTCCGGCATGGTaGTCAGGAACAGAAACTCCTGTTTGGCACTGTACA +
Preference number: 6 (lower is better)
Translates to: ASLLATSSLPAW*SGTETPVWHCT
Trigger: TGTACAGTGCCAAACAGGAGTTTCTGTTCCTGACAACCATGCCGGAAGTGAGGAAGTTGCCAGAAGAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264249.8
ENST00000409046.5
ENST00000409701.5
ENST00000418201.5
ENST00000420858.5
ENST00000421474.5
ENST00000448989.5
CDS CCA 72 bp GCTTGTCACAGACAAATATTCGGTCCAGGACAAACTTaGAGACAGGAGTGTGCGAGAGATTCTTCAGGGCAT +
Preference number: 6 (lower is better)
Translates to: ACHRQIFGPGQT*RQECARDSSGH
Trigger: ATGCCCTGAAGAATCTCTCGCACACTCCTGTCTCCAAGTTTGTCCTGGACCGAATATTTGTCTGTGACAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264249.8
ENST00000409046.5
ENST00000409701.5
ENST00000420858.5
ENST00000484382.5
CDS CCA 72 bp TTTAAGATGTATGGGGCATCGTCCTCCAGGGTCTCGTaGTGTCCAATCACACTGTACATTATCTCACAGGGA +
Preference number: 6 (lower is better)
Translates to: FKMYGASSSRVS*CPITLYIISQG
Trigger: TCCCTGTGAGATAATGTACAGTGTGATTGGACACCACGAGACCCTGGAGGACGATGCCCCATACATCTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264249.8
ENST00000409701.5
CDS CAA 72 bp TGCTTGTCACAGACAAATATTCGGTCCAGGACAAACTaGGAGACAGGAGTGTGCGAGAGATTCTTCAGGGCA +
Preference number: 6 (lower is better)
Translates to: CLSQTNIRSRTN*ETGVCERFFRA
Trigger: TGCCCTGAAGAATCTCTCGCACACTCCTGTCTCCAAGTTTGTCCTGGACCGAATATTTGTCTGTGACAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264249.8
ENST00000409046.5
ENST00000409701.5
ENST00000420858.5
ENST00000484382.5
CDS CAA 90 bp AGAATCTTGTGCTTGTCACAGACAAATATTCGGTCCAGGACAAACTaGGAGACAGGAGTGTGCGAGAGATTCTTCAGGGCATCATCCCTG +
Preference number: 6 (lower is better)
Translates to: RILCLSQTNIRSRTN*ETGVCERFFRASSL
Trigger: CAGGGATGATGCCCTGAAGAATCTCTCGCACACTCCTGTCTCCAAGTTTGTCCTGGACCGAATATTTGTCTGTGACAAGCACAAGATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264249.8
ENST00000409046.5
ENST00000409701.5
ENST00000420858.5
ENST00000484382.5
CDS CAA 90 bp TGGGTGTTGCCCACTTTGGGAGTCTGGCAGAAAAGAATCTTGTGCTaGTCACAGACAAATATTCGGTCCAGGACAAACTTGGAGACAGGA +
Preference number: 6 (lower is better)
Translates to: WVLPTLGVWQKRILC*SQTNIRSRTNLETG
Trigger: TCCTGTCTCCAAGTTTGTCCTGGACCGAATATTTGTCTGTGACAAGCACAAGATTCTTTTCTGCCAGACTCCCAAAGTGGGCAACACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264249.8
ENST00000409046.5
ENST00000409701.5
ENST00000420858.5
ENST00000484382.5
CDS CAA 90 bp TTCCACTGGGTGTTGCCCACTTTGGGAGTCTGGCAGAAAAGAATCTaGTGCTTGTCACAGACAAATATTCGGTCCAGGACAAACTTGGAG +
Preference number: 6 (lower is better)
Translates to: FHWVLPTLGVWQKRI*CLSQTNIRSRTNLE
Trigger: CTCCAAGTTTGTCCTGGACCGAATATTTGTCTGTGACAAGCACAAGATTCTTTTCTGCCAGACTCCCAAAGTGGGCAACACCCAGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264249.8
ENST00000409046.5
ENST00000409701.5
ENST00000484382.5
CDS CAA 90 bp CTGGGGCTCACATTTCCTTGCTGTGTTTCCCCTGAACTGAGGTTCTaGGTTCCTCTTGTCACTTCTGAGAAATGTATCGTTAGGCGATGT +
Preference number: 6 (lower is better)
Translates to: LGLTFPCCVSPELRF*VPLVTSEKCIVRRC
Trigger: ACATCGCCTAACGATACATTTCTCAGAAGTGACAAGAGGAACCAAGAACCTCAGTTCAGGGGAAACACAGCAAGGAAATGTGAGCCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420858.5
CDS CAA 72 bp GTGTTGCCCACTTTGGGAGTCTGGCAGAAAAGAATCTaGTGCTTGTCACAGACAAATATTCGGTCCAGGACA +
Preference number: 6 (lower is better)
Translates to: VLPTLGVWQKRI*CLSQTNIRSRT
Trigger: TGTCCTGGACCGAATATTTGTCTGTGACAAGCACAAGATTCTTTTCTGCCAGACTCCCAAAGTGGGCAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264249.8
ENST00000409046.5
ENST00000409701.5
ENST00000420858.5
ENST00000484382.5
CDS CAA 72 bp ACAATCAGCACTTTCTTCCACTGGGTGTTGCCCACTTaGGGAGTCTGGCAGAAAAGAATCTTGTGCTTGTCA +
Preference number: 6 (lower is better)
Translates to: TISTFFHWVLPT*GVWQKRILCLS
Trigger: TGACAAGCACAAGATTCTTTTCTGCCAGACTCCCAAAGTGGGCAACACCCAGTGGAAGAAAGTGCTGATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264249.8
ENST00000409046.5
ENST00000409701.5
ENST00000484382.5
CDS TCA 72 bp AGTATGTTTTCAATCGCTTCTGAATTTCTGCATCACTaGAGGAAGAGAGCCGAGGAAGGCCGTTCTTCTCGT +
Preference number: 6 (lower is better)
Translates to: SMFSIASEFLHH*RKRAEEGRSSR
Trigger: ACGAGAAGAACGGCCTTCCTCGGCTCTCTTCCTTCAGTGATGCAGAAATTCAGAAGCGATTGAAAACATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264249.8
ENST00000409701.5
CDS GCA 72 bp GCTGCACTACTTTCCATTCACTGCCCAACCCTTTCCTaGCTTGCAGACTTGGAAAGCAAAAATGACATTTTG +
Preference number: 6 (lower is better)
Translates to: AALLSIHCPTLS*LADLESKNDIL
Trigger: CAAAATGTCATTTTTGCTTTCCAAGTCTGCAAGGCAGGAAAGGGTTGGGCAGTGAATGGAAAGTAGTGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435960.5
CDS CAA 72 bp CCCACTTTGGGAGTCTGGCAGAAAAGAATCTTGTGCTaGTCACAGACAAATATTCGGTCCAGGACAAACTTG +
Preference number: 6 (lower is better)
Translates to: PTLGVWQKRILC*SQTNIRSRTNL
Trigger: CAAGTTTGTCCTGGACCGAATATTTGTCTGTGACAAGCACAAGATTCTTTTCTGCCAGACTCCCAAAGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264249.8
ENST00000409046.5
ENST00000409701.5
ENST00000420858.5
ENST00000484382.5
CDS TCA 72 bp ATCTCATGCCTGTACCAAGGCTCAAACCGGGGATTGTaGACAAATTTATCCTTAAATGCAGAAATAAGTCTT +
Preference number: 6 (lower is better)
Translates to: ISCLYQGSNRGL*TNLSLNAEISL
Trigger: AAGACTTATTTCTGCATTTAAGGATAAATTTGTTCACAATCCCCGGTTTGAGCCTTGGTACAGGCATGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264249.8
ENST00000409701.5
CDS GCA 72 bp CTCAAACCGGGGATTGTGAACAAATTTATCCTTAAATaGAGAAATAAGTCTTTCGAAGGGATCTCTTACAAT +
Preference number: 6 (lower is better)
Translates to: LKPGIVNKFILK*RNKSFEGISYN
Trigger: ATTGTAAGAGATCCCTTCGAAAGACTTATTTCTGCATTTAAGGATAAATTTGTTCACAATCCCCGGTTTGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264249.8
ENST00000409701.5