Pregenerated sensors for CHROMR (Homo sapiens)
Ensembl gene IDs: ENSG00000223960Ensembl transcript IDs: ENST00000415236.1, ENST00000420672.1, ENST00000436616.3, ENST00000442036.1, ENST00000450044.1, ENST00000453026.7, ENST00000454488.5, ENST00000659708.1, ENST00000660374.1, ENST00000661271.1, ENST00000662743.1, ENST00000663803.1, ENST00000665039.1, ENST00000666480.1, ENST00000668138.1, ENST00000671256.1, ENST00000671679.1
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TCTTCCATCTGTCAGCGCCGGCTCGTGCTAGCTTTCTACATTAGGTaGAAGTCTCAGCTCTGTGTTTGGAGTGCAGGGAAAGCCCATGGG | + |
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Preference number: 5 (lower is better) Translates to: SSICQRRLVLAFYIR*KSQLCVWSAGKAHG Trigger: CCCATGGGCTTTCCCTGCACTCCAAACACAGAGCTGAGACTTCCACCTAATGTAGAAAGCTAGCACGAGCCGGCGCTGACAGATGGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415236.1 |
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| CDS CCA 90 bp | TACTCAGCAGCACCAGCTGTAGGAGATGCATTCCACAGATCCTCTTaGCACAAACCTTTAGCCGGCCTTTCACACTGCCAGGATATCCGC | + |
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Preference number: 5 (lower is better) Translates to: YSAAPAVGDAFHRSS*HKPLAGLSHCQDIR Trigger: GCGGATATCCTGGCAGTGTGAAAGGCCGGCTAAAGGTTTGTGCCAAGAGGATCTGTGGAATGCATCTCCTACAGCTGGTGCTGCTGAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000415236.1 ENST00000453026.7 ENST00000659708.1 ENST00000662743.1 ENST00000663803.1 ENST00000665039.1 ENST00000666480.1 ENST00000668138.1 |
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| CDS CCA 90 bp | TCTTCCATCTGTCAGCGCCGGCTCGTGCTAGCTTTCTACATTAGGTaGAAGTCTCAGCTCTGTGTTTGGAGTGCAGGGAAAGCGAGGACA | + |
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Preference number: 5 (lower is better) Translates to: SSICQRRLVLAFYIR*KSQLCVWSAGKART Trigger: TGTCCTCGCTTTCCCTGCACTCCAAACACAGAGCTGAGACTTCCACCTAATGTAGAAAGCTAGCACGAGCCGGCGCTGACAGATGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000453026.7 ENST00000659708.1 |
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| CDS GCA 90 bp | GATGCCAGATCAGAGTGGTTACTCAGCAGCACCAGCTGTAGGAGATaGATTCCACAGATCCTCTTGGCACAAACCTTTAGCCGGCCTTTC | + |
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Preference number: 5 (lower is better) Translates to: DARSEWLLSSTSCRR*IPQILLAQTFSRPF Trigger: GAAAGGCCGGCTAAAGGTTTGTGCCAAGAGGATCTGTGGAATGCATCTCCTACAGCTGGTGCTGCTGAGTAACCACTCTGATCTGGCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000415236.1 ENST00000453026.7 ENST00000659708.1 ENST00000662743.1 ENST00000663803.1 ENST00000665039.1 ENST00000666480.1 ENST00000668138.1 |
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| CDS CCA 90 bp | CTCGTGCTAGCTTTCTACATTAGGTGGAAGTCTCAGCTCTGTGTTTaGAGTGCAGGGAAAGCGAGGACAACCAGAGACAAAGGGAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: LVLAFYIRWKSQLCV*SAGKARTTRDKGRR Trigger: CCTCCTCCCTTTGTCTCTGGTTGTCCTCGCTTTCCCTGCACTCCAAACACAGAGCTGAGACTTCCACCTAATGTAGAAAGCTAGCACGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000453026.7 ENST00000659708.1 |
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| CDS CCA 90 bp | TCTTCCATCTGTCAGCGCCGGCTCGTGCTAGCTTTCTACATTAGGTaGAAGTCTCAGCTCTGTGTTTGGAGTGCAGGGAAAGCTTTAGCC | + |
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Preference number: 5 (lower is better) Translates to: SSICQRRLVLAFYIR*KSQLCVWSAGKALA Trigger: GGCTAAAGCTTTCCCTGCACTCCAAACACAGAGCTGAGACTTCCACCTAATGTAGAAAGCTAGCACGAGCCGGCGCTGACAGATGGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454488.5 |
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| CDS TCA 90 bp | AAAGCCTCCCTCGTAGAATATGAGACTCTCAGGTTCTCAAGCCAATaGGGAGAGGAAGCTGAGGACCAGGCCCAGGACTTAGTCATGAGA | + |
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Preference number: 5 (lower is better) Translates to: KASLVEYETLRFSSQ*GEEAEDQAQDLVMR Trigger: TCTCATGACTAAGTCCTGGGCCTGGTCCTCAGCTTCCTCTCCTCATTGGCTTGAGAACCTGAGAGTCTCATATTCTACGAGGGAGGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS GCA 90 bp | AATTTGGGTCCAGGAGTTCAAGGTTACAGTAGCTTACTGTGCCACTaGACTCCCAGCCTGGGTGCAACTACACACTCAGCCTTAGTGACA | + |
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Preference number: 5 (lower is better) Translates to: NLGPGVQGYSSLLCH*TPSLGATTHSALVT Trigger: TGTCACTAAGGCTGAGTGTGTAGTTGCACCCAGGCTGGGAGTGCAGTGGCACAGTAAGCTACTGTAACCTTGAACTCCTGGACCCAAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS CCA 90 bp | CTCGTGCTAGCTTTCTACATTAGGTGGAAGTCTCAGCTCTGTGTTTaGAGTGCAGGGAAAGCTTTAGCCGGCCTTTCACACTGCCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: LVLAFYIRWKSQLCV*SAGKALAGLSHCQD Trigger: ATCCTGGCAGTGTGAAAGGCCGGCTAAAGCTTTCCCTGCACTCCAAACACAGAGCTGAGACTTCCACCTAATGTAGAAAGCTAGCACGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454488.5 |
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| CDS TCA 90 bp | ATTAGGTGGAAGTCTCAGCTCTGTGTTTGGAGTGCAGGGAAAGCTTaGGGGAAAAACATTACCGAGGACAACCAGAGACAAAGGGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: IRWKSQLCVWSAGKA*GKNITEDNQRQREE Trigger: CTCCTCCCTTTGTCTCTGGTTGTCCTCGGTAATGTTTTTCCCTCAAGCTTTCCCTGCACTCCAAACACAGAGCTGAGACTTCCACCTAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000662743.1 |
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| CDS TCA 90 bp | CAGTGTGCTTTTGGAGCCATTTCTCTTGCCTTCTCACTTATAGGATaGGAGTCTCCTCACTGGGGCAGGGAGAAGTTAACTGCTAGCACA | + |
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Preference number: 5 (lower is better) Translates to: QCAFGAISLAFSLIG*ESPHWGREKLTAST Trigger: TGTGCTAGCAGTTAACTTCTCCCTGCCCCAGTGAGGAGACTCTCATCCTATAAGTGAGAAGGCAAGAGAAATGGCTCCAAAAGCACACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS CCA 90 bp | CTCGTGCTAGCTTTCTACATTAGGTGGAAGTCTCAGCTCTGTGTTTaGAGTGCAGGGAAAGCCCATGGGAAGTATCATGAGTACCTTGAG | + |
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Preference number: 5 (lower is better) Translates to: LVLAFYIRWKSQLCV*SAGKAHGKYHEYLE Trigger: CTCAAGGTACTCATGATACTTCCCATGGGCTTTCCCTGCACTCCAAACACAGAGCTGAGACTTCCACCTAATGTAGAAAGCTAGCACGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415236.1 |
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| CDS CCA 90 bp | ACATGTGTGAGAAATTTTATATCCCTATCCAACCACAGAAAGATGTaGGGACCTTGCTTGTCAGGGTCCCCTGACCCTGGGAAAGTAGGG | + |
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Preference number: 5 (lower is better) Translates to: TCVRNFISLSNHRKM*GPCLSGSPDPGKVG Trigger: CCCTACTTTCCCAGGGTCAGGGGACCCTGACAAGCAAGGTCCCCACATCTTTCTGTGGTTGGATAGGGATATAAAATTTCTCACACATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663803.1 |
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| CDS TCA 90 bp | GCAGGGCATAGTGGCATGCATTTGTTGTTCTGTTACTCAAGAGGCTaGGGCCAGAGGATAATTTGGGTCCAGGAGTTCAAGGTTACAGTA | + |
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Preference number: 5 (lower is better) Translates to: AGHSGMHLLFCYSRG*GQRIIWVQEFKVTV Trigger: TACTGTAACCTTGAACTCCTGGACCCAAATTATCCTCTGGCCTCAGCCTCTTGAGTAACAGAACAACAAATGCATGCCACTATGCCCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS GCA 90 bp | GGGAAAGTAGGGCACTTAGGGGCTCAAAGAACTCCTGATATTCTGTaGTACTTTGGGATTGAAGGACGGGTGAAGTGCATTGTCTCAGTA | + |
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Preference number: 5 (lower is better) Translates to: GKVGHLGAQRTPDIL*YFGIEGRVKCIVSV Trigger: TACTGAGACAATGCACTTCACCCGTCCTTCAATCCCAAAGTAGCACAGAATATCAGGAGTTCTTTGAGCCCCTAAGTGCCCTACTTTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663803.1 |
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| CDS CCA 90 bp | TGGTATCAGAAGGGTTGCAGGAAAGTAGGTGCTCCAGTGTGCTTTTaGAGCCATTTCTCTTGCCTTCTCACTTATAGGATGAGAGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: WYQKGCRKVGAPVCF*SHFSCLLTYRMRVS Trigger: GGAGACTCTCATCCTATAAGTGAGAAGGCAAGAGAAATGGCTCCAAAAGCACACTGGAGCACCTACTTTCCTGCAACCCTTCTGATACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS CCA 90 bp | GAAACTCTGCTCTGTAACTTGATCAAAGAAGATGCCAGATCAGAGTaGTTACTCAGCAGCACCAGCTGTAGGAGATGCATTCCACAGATC | + |
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Preference number: 5 (lower is better) Translates to: ETLLCNLIKEDARSE*LLSSTSCRRCIPQI Trigger: GATCTGTGGAATGCATCTCCTACAGCTGGTGCTGCTGAGTAACCACTCTGATCTGGCATCTTCTTTGATCAAGTTACAGAGCAGAGTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000415236.1 ENST00000453026.7 ENST00000659708.1 ENST00000662743.1 ENST00000663803.1 ENST00000665039.1 ENST00000666480.1 ENST00000668138.1 |
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| CDS CCA 90 bp | CCACCTTTGAGATTGCATCATAGTCCATATTCTTCCTCCACCCAGTaGAGTTTCCTTTCTTTCCACAGGTGGCAATCCAAATCTCCTACC | + |
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Preference number: 5 (lower is better) Translates to: PPLRLHHSPYSSSTQ*SFLSFHRWQSKSPT Trigger: GGTAGGAGATTTGGATTGCCACCTGTGGAAAGAAAGGAAACTCCACTGGGTGGAGGAAGAATATGGACTATGATGCAATCTCAAAGGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS GCA 90 bp | GATACTTGGTATCAGAAGGGTTGCAGGAAAGTAGGTGCTCCAGTGTaGTTTTGGAGCCATTTCTCTTGCCTTCTCACTTATAGGATGAGA | + |
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Preference number: 5 (lower is better) Translates to: DTWYQKGCRKVGAPV*FWSHFSCLLTYRMR Trigger: TCTCATCCTATAAGTGAGAAGGCAAGAGAAATGGCTCCAAAAGCACACTGGAGCACCTACTTTCCTGCAACCCTTCTGATACCAAGTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS CCA 90 bp | CCTGACAGTGCAGTTATTAAAACTTTGACTAGTGGTGAACTGAGATaGCATGTCAACACAAAGAAATGCACCGGCAGGCACGAAGATCAG | + |
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Preference number: 5 (lower is better) Translates to: PDSAVIKTLTSGELR*HVNTKKCTGRHEDQ Trigger: CTGATCTTCGTGCCTGCCGGTGCATTTCTTTGTGTTGACATGCCATCTCAGTTCACCACTAGTCAAAGTTTTAATAACTGCACTGTCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS CCA 90 bp | CCAAATCTCCTACCCACTAATCTTCATCTCAGCATCTGTGATACTTaGTATCAGAAGGGTTGCAGGAAAGTAGGTGCTCCAGTGTGCTTT | + |
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Preference number: 5 (lower is better) Translates to: PNLLPTNLHLSICDT*YQKGCRKVGAPVCF Trigger: AAAGCACACTGGAGCACCTACTTTCCTGCAACCCTTCTGATACCAAGTATCACAGATGCTGAGATGAAGATTAGTGGGTAGGAGATTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS TCA 90 bp | TCAGCTCTGTGTTTGGAGTGCAGGGAAAGCTTCATAGAGGAAACATaGATGAAGGTAGGTCTCATGTATTCATACAGAAGGAAGCATGTA | + |
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Preference number: 5 (lower is better) Translates to: SALCLECRESFIEET*MKVGLMYSYRRKHV Trigger: TACATGCTTCCTTCTGTATGAATACATGAGACCTACCTTCATTCATGTTTCCTCTATGAAGCTTTCCCTGCACTCCAAACACAGAGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000420672.1 ENST00000436616.3 ENST00000450044.1 ENST00000660374.1 ENST00000663803.1 ENST00000665039.1 ENST00000666480.1 ENST00000668138.1 ENST00000671256.1 ENST00000671679.1 |
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| CDS GCA 90 bp | CAGTTCAGCCTCCATGGAATAAGCTTCTCAGTTCCTCAAATGAATTaGCATATGACCCAGCAACTCCACTCCTTTTGTGTTTCCATATAT | + |
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Preference number: 5 (lower is better) Translates to: QFSLHGISFSVPQMN*HMTQQLHSFCVSIY Trigger: ATATATGGAAACACAAAAGGAGTGGAGTTGCTGGGTCATATGGCAATTCATTTGAGGAACTGAGAAGCTTATTCCATGGAGGCTGAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000436616.3 ENST00000453026.7 ENST00000454488.5 ENST00000659708.1 ENST00000661271.1 ENST00000662743.1 ENST00000663803.1 ENST00000665039.1 ENST00000671256.1 ENST00000671679.1 |
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| CDS TCA 90 bp | ACAGTGACCCAAGCACAGGATTCCAAGGTTATTTATGGCATTCTCTaGATCTCTGTAGTACTTCCTATTGTTACAATCTGTCCTGCATTG | + |
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Preference number: 5 (lower is better) Translates to: TVTQAQDSKVIYGIL*ISVVLPIVTICPAL Trigger: CAATGCAGGACAGATTGTAACAATAGGAAGTACTACAGAGATTCAGAGAATGCCATAAATAACCTTGGAATCCTGTGCTTGGGTCACTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662743.1 |
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| CDS TCA 90 bp | AAAGGATATTACGTGGTTGTAGACAGTCCGTATGTATTGATAAAATaGGGTCTGAGGATAAGGTGCCCAGAAGATAAAATTGCTGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: KGYYVVVDSPYVLIK*GLRIRCPEDKIAAA Trigger: GGCAGCAGCAATTTTATCTTCTGGGCACCTTATCCTCAGACCTCATTTTATCAATACATACGGACTGTCTACAACCACGTAATATCCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000665039.1 ENST00000671679.1 |
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| CDS TCA 90 bp | GAACAAAACCAAGCACAGGATTCCAAGGTTATTTATGGCATTCTCTaGATCTCTGTAGTACTTCCTATTGTTACAATCTGTCCTGCATTG | + |
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Preference number: 5 (lower is better) Translates to: EQNQAQDSKVIYGIL*ISVVLPIVTICPAL Trigger: CAATGCAGGACAGATTGTAACAATAGGAAGTACTACAGAGATTCAGAGAATGCCATAAATAACCTTGGAATCCTGTGCTTGGTTTTGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420672.1 |
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| CDS GCA 72 bp | CAAGCACGAGCAAGAGGCCCCGGGCGGCTGTATCCCTaGCCGGCGAATTCAGAGGGAGCGGGCGCCGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: QARARGPGRLYP*PANSEGAGAAA Trigger: GGCCGCGGCGCCCGCTCCCTCTGAATTCGCCGGGCAGGGATACAGCCGCCCGGGGCCTCTTGCTCGTGCTTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000453026.7 ENST00000663803.1 ENST00000665039.1 ENST00000666480.1 |
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| CDS CAA 72 bp | TCCCTATCCAACCACAGAAAGATGTGGGGACCTTGCTaGTCAGGGTCCCCTGACCCTGGGAAAGTAGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: SLSNHRKMWGPC*SGSPDPGKVGH Trigger: GTGCCCTACTTTCCCAGGGTCAGGGGACCCTGACAAGCAAGGTCCCCACATCTTTCTGTGGTTGGATAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663803.1 |
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| CDS TCA 72 bp | GATGAAGAGCCGCTCCCTTGTTCTCGGGGTGTGCTGTaGTATGCCACACAGTCCCCTTCCCTACAGAGGATT | + |
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Preference number: 6 (lower is better) Translates to: DEEPLPCSRGVL*YATQSPSLQRI Trigger: AATCCTCTGTAGGGAAGGGGACTGTGTGGCATATCACAGCACACCCCGAGAACAAGGGAGCGGCTCTTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS GCA 72 bp | CCAGGAGTTCAAGGTTACAGTAGCTTACTGTGCCACTaGACTCCCAGCCTGGGTGCAACTACACACTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: PGVQGYSSLLCH*TPSLGATTHSA Trigger: GGCTGAGTGTGTAGTTGCACCCAGGCTGGGAGTGCAGTGGCACAGTAAGCTACTGTAACCTTGAACTCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS GCA 72 bp | ATATCCCTATCCAACCACAGAAAGATGTGGGGACCTTaGTTGTCAGGGTCCCCTGACCCTGGGAAAGTAGGG | + |
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Preference number: 6 (lower is better) Translates to: ISLSNHRKMWGP*LSGSPDPGKVG Trigger: CCCTACTTTCCCAGGGTCAGGGGACCCTGACAAGCAAGGTCCCCACATCTTTCTGTGGTTGGATAGGGATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663803.1 |
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| CDS GCA 72 bp | TTGGGTCCAGGAGTTCAAGGTTACAGTAGCTTACTGTaGCACTGCACTCCCAGCCTGGGTGCAACTACACAC | + |
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Preference number: 6 (lower is better) Translates to: LGPGVQGYSSLL*HCTPSLGATTH Trigger: GTGTGTAGTTGCACCCAGGCTGGGAGTGCAGTGGCACAGTAAGCTACTGTAACCTTGAACTCCTGGACCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS GCA 72 bp | TATTTGATGAAGAGCCGCTCCCTTGTTCTCGGGGTGTaGTGTGATATGCCACACAGTCCCCTTCCCTACAGA | + |
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Preference number: 6 (lower is better) Translates to: YLMKSRSLVLGV*CDMPHSPLPYR Trigger: TCTGTAGGGAAGGGGACTGTGTGGCATATCACAGCACACCCCGAGAACAAGGGAGCGGCTCTTCATCAAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS CAA 72 bp | CAGCCTCTGGGAATATGTGGGCCCATATTGTGTTATTaGATGAAGAGCCGCTCCCTTGTTCTCGGGGTGTGC | + |
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Preference number: 6 (lower is better) Translates to: QPLGICGPILCY*MKSRSLVLGVC Trigger: GCACACCCCGAGAACAAGGGAGCGGCTCTTCATCAAATAACACAATATGGGCCCACATATTCCCAGAGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS CAA 90 bp | TTACTCAGCAGCACCAGCTGTAGGAGATGCATTCCACAGATCCTCTaGGCACAAACCTTTAGCCGGCCTTTCACACTGCCAGGATATCCG | + |
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Preference number: 6 (lower is better) Translates to: LLSSTSCRRCIPQIL*AQTFSRPFTLPGYP Trigger: CGGATATCCTGGCAGTGTGAAAGGCCGGCTAAAGGTTTGTGCCAAGAGGATCTGTGGAATGCATCTCCTACAGCTGGTGCTGCTGAGTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000415236.1 ENST00000453026.7 ENST00000659708.1 ENST00000662743.1 ENST00000663803.1 ENST00000665039.1 ENST00000666480.1 ENST00000668138.1 |
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| CDS TCA 72 bp | GACTCTCAGGTTCTCAAGCCAATGAGGAGAGGAAGCTaGGGACCAGGCCCAGGACTTAGTCATGAGAATAAA | + |
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Preference number: 6 (lower is better) Translates to: DSQVLKPMRRGS*GPGPGLSHENK Trigger: TTTATTCTCATGACTAAGTCCTGGGCCTGGTCCTCAGCTTCCTCTCCTCATTGGCTTGAGAACCTGAGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS TCA 72 bp | AGAATTGCCCTCTTAAGTGAAAAGAGCCACCTCATCTaGAGTCACACTTCCTTCTTGGGCCAGGCTGCATGC | + |
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Preference number: 6 (lower is better) Translates to: RIALLSEKSHLI*SHTSFLGQAAC Trigger: GCATGCAGCCTGGCCCAAGAAGGAAGTGTGACTTCAGATGAGGTGGCTCTTTTCACTTAAGAGGGCAATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS GCA 72 bp | TCAGAGTGGTTACTCAGCAGCACCAGCTGTAGGAGATaGATTCCACAGATCCTCTTGGCACAAACCTTTAGC | + |
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Preference number: 6 (lower is better) Translates to: SEWLLSSTSCRR*IPQILLAQTFS Trigger: GCTAAAGGTTTGTGCCAAGAGGATCTGTGGAATGCATCTCCTACAGCTGGTGCTGCTGAGTAACCACTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000415236.1 ENST00000453026.7 ENST00000659708.1 ENST00000662743.1 ENST00000663803.1 ENST00000665039.1 ENST00000666480.1 ENST00000668138.1 |
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| CDS GCA 72 bp | CCTCATCTGAAGTCACACTTCCTTCTTGGGCCAGGCTaGATGCAAAGACTAGTCCCATTGCCCCATATTAGA | + |
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Preference number: 6 (lower is better) Translates to: PHLKSHFLLGPG*MQRLVPLPHIR Trigger: TCTAATATGGGGCAATGGGACTAGTCTTTGCATGCAGCCTGGCCCAAGAAGGAAGTGTGACTTCAGATGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS CCA 72 bp | GCTTTCTACATTAGGTGGAAGTCTCAGCTCTGTGTTTaGAGTGCAGGGAAAGCTTTAGCCGGCCTTTCACAC | + |
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Preference number: 6 (lower is better) Translates to: AFYIRWKSQLCV*SAGKALAGLSH Trigger: GTGTGAAAGGCCGGCTAAAGCTTTCCCTGCACTCCAAACACAGAGCTGAGACTTCCACCTAATGTAGAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454488.5 |
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| CDS CAA 90 bp | GTGTTTGGAGTGCAGGGAAAGCCCATGGGAAGTATCATGAGTACCTaGAGGGAAAAACATTACCGAGGACAACCAGAGACAAAGGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: VFGVQGKPMGSIMST*REKHYRGQPETKGG Trigger: TCCTCCCTTTGTCTCTGGTTGTCCTCGGTAATGTTTTTCCCTCAAGGTACTCATGATACTTCCCATGGGCTTTCCCTGCACTCCAAACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000415236.1 |
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| CDS GCA 72 bp | GGGCACTTAGGGGCTCAAAGAACTCCTGATATTCTGTaGTACTTTGGGATTGAAGGACGGGTGAAGTGCATT | + |
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Preference number: 6 (lower is better) Translates to: GHLGAQRTPDIL*YFGIEGRVKCI Trigger: AATGCACTTCACCCGTCCTTCAATCCCAAAGTAGCACAGAATATCAGGAGTTCTTTGAGCCCCTAAGTGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663803.1 |
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| CDS GCA 72 bp | CATCTCAGCATCTGTGATACTTGGTATCAGAAGGGTTaGAGGAAAGTAGGTGCTCCAGTGTGCTTTTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: HLSICDTWYQKG*RKVGAPVCFWS Trigger: GCTCCAAAAGCACACTGGAGCACCTACTTTCCTGCAACCCTTCTGATACCAAGTATCACAGATGCTGAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS CCA 72 bp | GCTTTCTACATTAGGTGGAAGTCTCAGCTCTGTGTTTaGAGTGCAGGGAAAGCCCATGGGAAGTATCATGAG | + |
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Preference number: 6 (lower is better) Translates to: AFYIRWKSQLCV*SAGKAHGKYHE Trigger: CTCATGATACTTCCCATGGGCTTTCCCTGCACTCCAAACACAGAGCTGAGACTTCCACCTAATGTAGAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415236.1 |
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| CDS CCA 72 bp | GCTTTCTACATTAGGTGGAAGTCTCAGCTCTGTGTTTaGAGTGCAGGGAAAGCGAGGACAACCAGAGACAAA | + |
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Preference number: 6 (lower is better) Translates to: AFYIRWKSQLCV*SAGKARTTRDK Trigger: TTTGTCTCTGGTTGTCCTCGCTTTCCCTGCACTCCAAACACAGAGCTGAGACTTCCACCTAATGTAGAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000453026.7 ENST00000659708.1 |
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| CDS CAA 72 bp | GTGCAGGGAAAGCCCATGGGAAGTATCATGAGTACCTaGAGGGAAAAACATTACCGAGGACAACCAGAGACA | + |
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Preference number: 6 (lower is better) Translates to: VQGKPMGSIMST*REKHYRGQPET Trigger: TGTCTCTGGTTGTCCTCGGTAATGTTTTTCCCTCAAGGTACTCATGATACTTCCCATGGGCTTTCCCTGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000415236.1 |
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| CDS CAA 72 bp | CTCCAATTGTACCTACAGAGACAGCTACAGGCATCTTaGTTAGAGCAGACCCACATGGCATCAGGTGGACTT | + |
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Preference number: 6 (lower is better) Translates to: LQLYLQRQLQAS*LEQTHMASGGL Trigger: AAGTCCACCTGATGCCATGTGGGTCTGCTCTAACAAAGATGCCTGTAGCTGTCTCTGTAGGTACAATTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS CAA 90 bp | GAAGTGCCCCTCTCTTCTCTAATAAGGGCTAGTGTGCTCCCTCTTTaGCTTGAAGACAATGAGCTCTCTCTCCAAGGACAAAACATACAC | + |
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Preference number: 6 (lower is better) Translates to: EVPLSSLIRASVLPL*LEDNELSLQGQNIH Trigger: GTGTATGTTTTGTCCTTGGAGAGAGAGCTCATTGTCTTCAAGCAAAAGAGGGAGCACACTAGCCCTTATTAGAGAAGAGAGGGGCACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS TCA 72 bp | AGTGGCATGCATTTGTTGTTCTGTTACTCAAGAGGCTaGGGCCAGAGGATAATTTGGGTCCAGGAGTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: SGMHLLFCYSRG*GQRIIWVQEFK Trigger: CTTGAACTCCTGGACCCAAATTATCCTCTGGCCTCAGCCTCTTGAGTAACAGAACAACAAATGCATGCCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS TCA 72 bp | TTTGGAGCCATTTCTCTTGCCTTCTCACTTATAGGATaGGAGTCTCCTCACTGGGGCAGGGAGAAGTTAACT | + |
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Preference number: 6 (lower is better) Translates to: FGAISLAFSLIG*ESPHWGREKLT Trigger: AGTTAACTTCTCCCTGCCCCAGTGAGGAGACTCTCATCCTATAAGTGAGAAGGCAAGAGAAATGGCTCCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS CAA 72 bp | CTTCAATCCCCAGCCCTGGAAACTCTGCTCTGTAACTaGATCAAAGAAGATGCCAGATCAGAGTGGTTACTC | + |
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Preference number: 6 (lower is better) Translates to: LQSPALETLLCN*IKEDARSEWLL Trigger: GAGTAACCACTCTGATCTGGCATCTTCTTTGATCAAGTTACAGAGCAGAGTTTCCAGGGCTGGGGATTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000415236.1 ENST00000453026.7 ENST00000659708.1 ENST00000662743.1 ENST00000663803.1 ENST00000665039.1 ENST00000666480.1 ENST00000668138.1 |
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| CDS CAA 72 bp | GTTCTGTTACTCAAGAGGCTGAGGCCAGAGGATAATTaGGGTCCAGGAGTTCAAGGTTACAGTAGCTTACTG | + |
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Preference number: 6 (lower is better) Translates to: VLLLKRLRPEDN*GPGVQGYSSLL Trigger: CAGTAAGCTACTGTAACCTTGAACTCCTGGACCCAAATTATCCTCTGGCCTCAGCCTCTTGAGTAACAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS TCA 72 bp | TTCAATCCCCAGCCCTGGAAACTCTGCTCTGTAACTTaGTCAAAGAAGATGCCAGATCAGAGTGGTTACTCA | + |
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Preference number: 6 (lower is better) Translates to: FNPQPWKLCSVT*SKKMPDQSGYS Trigger: TGAGTAACCACTCTGATCTGGCATCTTCTTTGATCAAGTTACAGAGCAGAGTTTCCAGGGCTGGGGATTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000415236.1 ENST00000453026.7 ENST00000659708.1 ENST00000662743.1 ENST00000663803.1 ENST00000665039.1 ENST00000666480.1 ENST00000668138.1 |
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| CDS TCA 72 bp | CGAAGATCAGGTGGGAAACAGTGTAGACAGTGGAACTaGAGAGTTATTACTGAGCTAGACCGATACCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: RRSGGKQCRQWN*RVITELDRYLG Trigger: TCCAAGGTATCGGTCTAGCTCAGTAATAACTCTTCAGTTCCACTGTCTACACTGTTTCCCACCTGATCTTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS GCA 72 bp | TATCAGAAGGGTTGCAGGAAAGTAGGTGCTCCAGTGTaGTTTTGGAGCCATTTCTCTTGCCTTCTCACTTAT | + |
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Preference number: 6 (lower is better) Translates to: YQKGCRKVGAPV*FWSHFSCLLTY Trigger: ATAAGTGAGAAGGCAAGAGAAATGGCTCCAAAAGCACACTGGAGCACCTACTTTCCTGCAACCCTTCTGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS CCA 72 bp | CTCTGTAACTTGATCAAAGAAGATGCCAGATCAGAGTaGTTACTCAGCAGCACCAGCTGTAGGAGATGCATT | + |
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Preference number: 6 (lower is better) Translates to: LCNLIKEDARSE*LLSSTSCRRCI Trigger: AATGCATCTCCTACAGCTGGTGCTGCTGAGTAACCACTCTGATCTGGCATCTTCTTTGATCAAGTTACAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000415236.1 ENST00000453026.7 ENST00000659708.1 ENST00000662743.1 ENST00000663803.1 ENST00000665039.1 ENST00000666480.1 ENST00000668138.1 |
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| CDS CCA 72 bp | CTACCCACTAATCTTCATCTCAGCATCTGTGATACTTaGTATCAGAAGGGTTGCAGGAAAGTAGGTGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: LPTNLHLSICDT*YQKGCRKVGAP Trigger: TGGAGCACCTACTTTCCTGCAACCCTTCTGATACCAAGTATCACAGATGCTGAGATGAAGATTAGTGGGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS CAA 72 bp | CTCTCTTCTCTAATAAGGGCTAGTGTGCTCCCTCTTTaGCTTGAAGACAATGAGCTCTCTCTCCAAGGACAA | + |
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Preference number: 6 (lower is better) Translates to: LSSLIRASVLPL*LEDNELSLQGQ Trigger: TTGTCCTTGGAGAGAGAGCTCATTGTCTTCAAGCAAAAGAGGGAGCACACTAGCCCTTATTAGAGAAGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS TCA 72 bp | GAGGGTTTAGAATACAGAGATGAACGACCCATGTCATaGATAGGACTATGGAGGATACAGAATCTGGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: EGLEYRDERPMS*IGLWRIQNLGE Trigger: TTCCCCCAGATTCTGTATCCTCCATAGTCCTATTCATGACATGGGTCGTTCATCTCTGTATTCTAAACCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000436616.3 ENST00000659708.1 ENST00000661271.1 ENST00000662743.1 ENST00000663803.1 ENST00000665039.1 ENST00000671679.1 |
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| CDS CAA 72 bp | CCTCCATGGAATAAGCTTCTCAGTTCCTCAAATGAATaGCCATATGACCCAGCAACTCCACTCCTTTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: PPWNKLLSSSNE*PYDPATPLLLC Trigger: ACACAAAAGGAGTGGAGTTGCTGGGTCATATGGCAATTCATTTGAGGAACTGAGAAGCTTATTCCATGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000436616.3 ENST00000453026.7 ENST00000454488.5 ENST00000659708.1 ENST00000661271.1 ENST00000662743.1 ENST00000663803.1 ENST00000665039.1 ENST00000671256.1 ENST00000671679.1 |
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| CDS CAA 72 bp | CTGCTAGCACACCCTGACAGTGCAGTTATTAAAACTTaGACTAGTGGTGAACTGAGATGGCATGTCAACACA | + |
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Preference number: 6 (lower is better) Translates to: LLAHPDSAVIKT*TSGELRWHVNT Trigger: TGTGTTGACATGCCATCTCAGTTCACCACTAGTCAAAGTTTTAATAACTGCACTGTCAGGGTGTGCTAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS CCA 72 bp | CGTTGCTGGTGGGAATATAAAACAGTTCAGCCTCCATaGAATAAGCTTCTCAGTTCCTCAAATGAATTGCCA | + |
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Preference number: 6 (lower is better) Translates to: RCWWEYKTVQPP*NKLLSSSNELP Trigger: TGGCAATTCATTTGAGGAACTGAGAAGCTTATTCCATGGAGGCTGAACTGTTTTATATTCCCACCAGCAACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000436616.3 ENST00000453026.7 ENST00000454488.5 ENST00000659708.1 ENST00000661271.1 ENST00000662743.1 ENST00000663803.1 ENST00000665039.1 ENST00000671256.1 ENST00000671679.1 |
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| CDS CAA 90 bp | ACAGTTCAGCCTCCATGGAATAAGCTTCTCAGTTCCTCAAATGAATaGCCATATGACCCAGCAACTCCACTCCTTTTGTGTTTCCATATA | + |
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Preference number: 6 (lower is better) Translates to: TVQPPWNKLLSSSNE*PYDPATPLLLCFHI Trigger: TATATGGAAACACAAAAGGAGTGGAGTTGCTGGGTCATATGGCAATTCATTTGAGGAACTGAGAAGCTTATTCCATGGAGGCTGAACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000436616.3 ENST00000453026.7 ENST00000454488.5 ENST00000659708.1 ENST00000661271.1 ENST00000662743.1 ENST00000663803.1 ENST00000665039.1 ENST00000671256.1 ENST00000671679.1 |
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| CDS CAA 90 bp | CTCATGTATTCATACAGAAGGAAGCATGTAGCAGGTATTTTTGTCTaGAGGGAAAAACATTACCGAGGACAACCAGAGACAAAGGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: LMYSYRRKHVAGIFV*REKHYRGQPETKGG Trigger: TCCTCCCTTTGTCTCTGGTTGTCCTCGGTAATGTTTTTCCCTCAAGACAAAAATACCTGCTACATGCTTCCTTCTGTATGAATACATGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000663803.1 ENST00000666480.1 |
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| CDS CAA 90 bp | TCACTTCTCAGACTATCCAGACCTTCTAGGGAGTTAGGGATTTTCTaGGACCATCAGGTGTATTCTTTAACACCATTTTGTTTAGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: SLLRLSRPSRELGIF*DHQVYSLTPFCLAL Trigger: GAGGGCTAAACAAAATGGTGTTAAAGAATACACCTGATGGTCCAAGAAAATCCCTAACTCCCTAGAAGGTCTGGATAGTCTGAGAAGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS CCA 72 bp | GACAGTGACCCAAGCACAGGATTCCAAGGTTATTTATaGCATTCTCTGAATCTCTGTAGTACTTCCTATTGT | + |
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Preference number: 6 (lower is better) Translates to: DSDPSTGFQGYL*HSLNLCSTSYC Trigger: ACAATAGGAAGTACTACAGAGATTCAGAGAATGCCATAAATAACCTTGGAATCCTGTGCTTGGGTCACTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662743.1 |
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| CDS CAA 90 bp | CTACTTCAAATAAATCATACCGCACACGTTTCTATTTCTTCCTCTTaGCCCTCATTTCAGCCATCTTTAGTAAGAGTGGCTCATCAGTTG | + |
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Preference number: 6 (lower is better) Translates to: LLQINHTAHVSISSS*PSFQPSLVRVAHQL Trigger: CAACTGATGAGCCACTCTTACTAAAGATGGCTGAAATGAGGGCAAAGAGGAAGAAATAGAAACGTGTGCGGTATGATTTATTTGAAGTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666480.1 |
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| CDS TCA 72 bp | GGACCTATCACCATTACTCAGGAAATCATACAGTGGTaGAAGGGGAATACTCAACATTTTGATATCTGTTGG | + |
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Preference number: 6 (lower is better) Translates to: GPITITQEIIQW*KGNTQHFDICW Trigger: CCAACAGATATCAAAATGTTGAGTATTCCCCTTTCACCACTGTATGATTTCCTGAGTAATGGTGATAGGTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS CAA 72 bp | ATAAATCATACCGCACACGTTTCTATTTCTTCCTCTTaGCCCTCATTTCAGCCATCTTTAGTAAGAGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: INHTAHVSISSS*PSFQPSLVRVA Trigger: AGCCACTCTTACTAAAGATGGCTGAAATGAGGGCAAAGAGGAAGAAATAGAAACGTGTGCGGTATGATTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666480.1 |
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| CDS TCA 72 bp | TCTAATTTAAGGGTAACTGACTTCTGCTTCCAAACATaGTATAATAACATGTGTGGGCTAGCCCTCCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: SNLRVTDFCFQT*YNNMCGLALLS Trigger: TGAAAGGAGGGCTAGCCCACACATGTTATTATATCATGTTTGGAAGCAGAAGTCAGTTACCCTTAAATTAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442036.1 |
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| CDS TCA 72 bp | TACGTGGTTGTAGACAGTCCGTATGTATTGATAAAATaGGGTCTGAGGATAAGGTGCCCAGAAGATAAAATT | + |
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Preference number: 6 (lower is better) Translates to: YVVVDSPYVLIK*GLRIRCPEDKI Trigger: AATTTTATCTTCTGGGCACCTTATCCTCAGACCTCATTTTATCAATACATACGGACTGTCTACAACCACGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000665039.1 ENST00000671679.1 |
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| CDS CAA 72 bp | TTTCTTGGACCATCAGGTGTATTCTTTAACACCATTTaGTTTAGCCCTCTGCTAAGGCTCTTAACCAATCTA | + |
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Preference number: 6 (lower is better) Translates to: FLGPSGVFFNTI*FSPLLRLLTNL Trigger: TAGATTGGTTAAGAGCCTTAGCAGAGGGCTAAACAAAATGGTGTTAAAGAATACACCTGATGGTCCAAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS CAA 90 bp | GTTAGGGATTTTCTTGGACCATCAGGTGTATTCTTTAACACCATTTaGTTTAGCCCTCTGCTAAGGCTCTTAACCAATCTAATTAGTCAA | + |
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Preference number: 6 (lower is better) Translates to: VRDFLGPSGVFFNTI*FSPLLRLLTNLISQ Trigger: TTGACTAATTAGATTGGTTAAGAGCCTTAGCAGAGGGCTAAACAAAATGGTGTTAAAGAATACACCTGATGGTCCAAGAAAATCCCTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS TCA 72 bp | CAAGCACAGGATTCCAAGGTTATTTATGGCATTCTCTaGATCTCTGTAGTACTTCCTATTGTTACAATCTGT | + |
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Preference number: 6 (lower is better) Translates to: QAQDSKVIYGIL*ISVVLPIVTIC Trigger: ACAGATTGTAACAATAGGAAGTACTACAGAGATTCAGAGAATGCCATAAATAACCTTGGAATCCTGTGCTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420672.1 ENST00000662743.1 |
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| CDS TCA 72 bp | AATCATACAGTGGTGAAAGGGGAATACTCAACATTTTaGTATCTGTTGGAAACAGGGTCTGAGTTAACAATG | + |
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Preference number: 6 (lower is better) Translates to: NHTVVKGEYSTF*YLLETGSELTM Trigger: CATTGTTAACTCAGACCCTGTTTCCAACAGATATCAAAATGTTGAGTATTCCCCTTTCACCACTGTATGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS CCA 72 bp | AGAACAAAACCAAGCACAGGATTCCAAGGTTATTTATaGCATTCTCTGAATCTCTGTAGTACTTCCTATTGT | + |
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Preference number: 6 (lower is better) Translates to: RTKPSTGFQGYL*HSLNLCSTSYC Trigger: ACAATAGGAAGTACTACAGAGATTCAGAGAATGCCATAAATAACCTTGGAATCCTGTGCTTGGTTTTGTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420672.1 |
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| CDS TCA 72 bp | TTCCACACCAGAAAACCAAAAACAAATATACAGCACTaGGATTATCACCAACAATATCCCAGAACTCAGATA | + |
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Preference number: 6 (lower is better) Translates to: FHTRKPKTNIQH*DYHQQYPRTQI Trigger: TATCTGAGTTCTGGGATATTGTTGGTGATAATCTCAGTGCTGTATATTTGTTTTTGGTTTTCTGGTGTGGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665039.1 |
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| CDS TCA 72 bp | AGATATCTGTATGTCTTTAACACTGTCAGATCATTATaGAGTGTAATGTGTTTGAAAACTGCTACAGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: RYLYVFNTVRSL*SVMCLKTATAE Trigger: CTCAGCTGTAGCAGTTTTCAAACACATTACACTTCATAATGATCTGACAGTGTTAAAGACATACAGATATCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666480.1 |
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