RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHRNG (Homo sapiens)

Ensembl gene IDs: ENSG00000196811

Ensembl transcript IDs: ENST00000389492.3, ENST00000485094.1, ENST00000651502.1

Found 226 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGGCCGGGTGTCCCCATGTTGCCCAGGCTGGGTTCCTGGGTTCGTaGGCTCCTGAGCTCAAGCAGTCCACCCACCTTGTCCTCCCAAGG +
Preference number: 1 (lower is better)
Translates to: EAGCPHVAQAGFLGS*APELKQSTHLVLPR
Trigger: CCTTGGGAGGACAAGGTGGGTGGACTGCTTGAGCTCAGGAGCCCACGAACCCAGGAACCCAGCCTGGGCAACATGGGGACACCCGGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR TCA 90 bp CCTTCGGGCTTCAGACTGATGGGAATGAATAATGCTTTGCCTAAGTaGGGGGAGTGCACTGAGTGGAGGGGTGGCTGGTGCCAGGATGAG +
Preference number: 1 (lower is better)
Translates to: PSGFRLMGMNNALPK*GECTEWRGGWCQDE
Trigger: CTCATCCTGGCACCAGCCACCCCTCCACTCAGTGCACTCCCCTCACTTAGGCAAAGCATTATTCATTCCCATCAGTCTGAAGCCCGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR TCA 90 bp CTGGTGGGAACCGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTaGTTGAAGTTCTCCCCCACTCTCCCTAACTCCTCTAGTTCTCTA +
Preference number: 1 (lower is better)
Translates to: LVGTGNGPTVIRFPP*LKFSPTLPNSSSSL
Trigger: TAGAGAACTAGAGGAGTTAGGGAGAGTGGGGGAGAACTTCAATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCGGTTCCCACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR GCA 90 bp GCTTTGGAGAGAGCATCGGCTGCTACTCTTCACACCTCTTGTGACTaGCCTCTTTCAGGGAGAACTTGTAAAAGGGGAGCCAGTCCCAAG +
Preference number: 1 (lower is better)
Translates to: ALERASAATLHTSCD*PLSGRTCKRGASPK
Trigger: CTTGGGACTGGCTCCCCTTTTACAAGTTCTCCCTGAAAGAGGGCAGTCACAAGAGGTGTGAAGAGTAGCAGCCGATGCTCTCTCCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR GCA 90 bp GCAATCCTGTGCTTGGAGGGAGGGCATATTTCCAAGGTCCCCTCCTaGCAGCATATCCTGTCGTCAGGCCTTTATGTGGCACTTTCACTT +
Preference number: 1 (lower is better)
Translates to: AILCLEGGHISKVPS*QHILSSGLYVALSL
Trigger: AAGTGAAAGTGCCACATAAAGGCCTGACGACAGGATATGCTGGCAGGAGGGGACCTTGGAAATATGCCCTCCCTCCAAGCACAGGATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR CCA 90 bp GAGGTTGAGAGACTTGTGCCAGATACACAACTAGTAAGGGGCTGGTaGGAACCGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTGAT +
Preference number: 1 (lower is better)
Translates to: EVERLVPDTQLVRGW*EPEMAPLSSDSLPD
Trigger: ATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGTGTATCTGGCACAAGTCTCTCAACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR TCA 90 bp TGGGAACCGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTGATTaGAGTTCTCCCCCACTCTCCCTAACTCCTCTAGTTCTCTATAGC +
Preference number: 1 (lower is better)
Translates to: WEPEMAPLSSDSLPD*SSPPLSLTPLVLYS
Trigger: GCTATAGAGAACTAGAGGAGTTAGGGAGAGTGGGGGAGAACTTCAATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCGGTTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR TCA 90 bp GACTTGCTTTCTTGTGTTGGTCTGGAACTGAACCTGCAATGTCTTTaGGGTATGCCTCGACCTACCTCCTTAGGTTGCTGTATGGATCCC +
Preference number: 1 (lower is better)
Translates to: DLLSCVGLELNLQCL*GMPRPTSLGCCMDP
Trigger: GGGATCCATACAGCAACCTAAGGAGGTAGGTCGAGGCATACCTCAAAGACATTGCAGGTTCAGTTCCAGACCAACACAAGAAAGCAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR-3UTR GCA 90 bp GTGACTTGCCCAAGGGTGTCCCCTGGTTACCAGCCAAACTCGTGTGCCGGCTGTTGGAGGGGTGGCTGGTaGCAGGATGAGCTAGCCAAT +
Preference number: 2 (lower is better)
Translates to: VTCPRVSPGYQPNSCAGCWRGGW*QDELAN
Trigger: ATTGGCTAGCTCATCCTGGCACCAGCCACCCCTCCA...ACAGCCGGCACACGAGTTTGGCTGGTAACCAGGGGACACCCTTGGGCAAGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR-3UTR CCA 90 bp CTGCTTTGGAGAGAGCATCGGCTGCTACTCTTCACACCTCTTGTGACTGCCCTCGAGTGGAGGGGTGGCTaGTGCCAGGATGAGCTAGCC +
Preference number: 2 (lower is better)
Translates to: LLWREHRLLLFTPLVTALEWRGG*CQDELA
Trigger: GGCTAGCTCATCCTGGCACCAGCCACCCCTCCACTC...GAGGGCAGTCACAAGAGGTGTGAAGAGTAGCAGCCGATGCTCTCTCCAAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR-3UTR TCA 90 bp CTGCTTTGGAGAGAGCATCGGCTGCTACTCTTCACACCTCTTGTGACTGCCCTCATCCCACGTGTGTGCTaGCTGCAGCAGGACACTAGC +
Preference number: 2 (lower is better)
Translates to: LLWREHRLLLFTPLVTALIPRVC*LQQDTS
Trigger: GCTAGTGTCCTGCTGCAGTCAGCACACACGTGGGAT...GAGGGCAGTCACAAGAGGTGTGAAGAGTAGCAGCCGATGCTCTCTCCAAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR-3UTR TCA 90 bp CCCCTGGTTACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTAGGTTGAGGCTGCAGTaGGCCATGATCATGCCACTC +
Preference number: 2 (lower is better)
Translates to: PLVTSQTRVPAVISEQDLRLRLQ*AMIMPL
Trigger: GAGTGGCATGATCATGGCTCACTGCAGCCTCAACCT...AAGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTGGCTGGTAACCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR-3UTR GCA 90 bp CGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTGATTGAAGTTCTCCCCCACCACGTGTGTGCTGACTaGAGCAGGACACTAGCCACG +
Preference number: 2 (lower is better)
Translates to: RKWPHCHQIPSLIEVLPHHVCAD*SRTLAT
Trigger: CGTGGCTAGTGTCCTGCTGCAGTCAGCACACACGTG...GTGGGGGAGAACTTCAATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR-3UTR CCA 90 bp GTCAAAGTCTCCTCCTGGAATGAAGAGCTCAGTGGCTCTCTGTTAACTCCACACGGGGAGTGCACTGAGTaGAGGGGTGGCTGGTGCCAG +
Preference number: 2 (lower is better)
Translates to: VKVSSWNEELSGSLLTPHGECTE*RGGWCQ
Trigger: CTGGCACCAGCCACCCCTCCACTCAGTGCACTCCCC...GTGTGGAGTTAACAGAGAGCCACTGAGCTCTTCATTCCAGGAGGAGACTTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR-3UTR CCA 90 bp GTCAAAGTCTCCTCCTGGAATGAAGAGCTCAGTGGCTCTCTGTTAACTCCACACGGGGGAGATGCCAGCTaGTATGGGCTGCTGCCCTGC +
Preference number: 2 (lower is better)
Translates to: VKVSSWNEELSGSLLTPHGGDAS*YGLLPC
Trigger: GCAGGGCAGCAGCCCATACCAGCTGGCATCTCCCCC...GTGTGGAGTTAACAGAGAGCCACTGAGCTCTTCATTCCAGGAGGAGACTTTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR CAA 90 bp ACCTTATTTACAGATGAGGGAACAGCCTCAGGGAGCATAGGTGACTaGCCCAAGGGTGTCCCCTGGTTACCAGCCAAACTCGTGTGCCGG +
Preference number: 2 (lower is better)
Translates to: TLFTDEGTASGSIGD*PKGVPWLPAKLVCR
Trigger: CCGGCACACGAGTTTGGCTGGTAACCAGGGGACACCCTTGGGCAAGTCACCTATGCTCCCTGAGGCTGTTCCCTCATCTGTAAATAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR-3UTR GCA 90 bp CGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTGATTGAAGTTCTCCCCCACTGTGTGACTCCCACATaGCCCACAGTGGTTGGTTGG +
Preference number: 2 (lower is better)
Translates to: RKWPHCHQIPSLIEVLPHCVTPT*PTVVGW
Trigger: CCAACCAACCACTGTGGGGCATGTGGGAGTCACACA...GTGGGGGAGAACTTCAATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR-3UTR TCA 90 bp CGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTGATTGAAGTTCTCCCCCACAATGCTTTGCCTAAGTaGGGGGAGTGCACTGAGTGG +
Preference number: 2 (lower is better)
Translates to: RKWPHCHQIPSLIEVLPHNALPK*GECTEW
Trigger: CCACTCAGTGCACTCCCCTCACTTAGGCAAAGCATT...GTGGGGGAGAACTTCAATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR-3UTR TCA 90 bp GGAACTGAACCTGCAATGTCTTTGAGGTATGCCTCGACCTACCTCCTTAGGTTGGGCAGGAGCATTGCTTaGGCCCTGGAGGTTGAGGCT +
Preference number: 2 (lower is better)
Translates to: GTEPAMSLRYASTYLLRLGRSIA*ALEVEA
Trigger: AGCCTCAACCTCCAGGGCTCAAGCAATGCTCCTGCC...CAACCTAAGGAGGTAGGTCGAGGCATACCTCAAAGACATTGCAGGTTCAGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR-3UTR GCA 90 bp TGGGGTCAAGGGAGGCCAGTCAAAGTCTCCTCCTGGAATGAAGAGCTCAGTGGCCACACCTCTTGTGACTaGCCTCTTTCAGGGAGAACT +
Preference number: 2 (lower is better)
Translates to: WGQGRPVKVSSWNEELSGHTSCD*PLSGRT
Trigger: AGTTCTCCCTGAAAGAGGGCAGTCACAAGAGGTGTG...GCCACTGAGCTCTTCATTCCAGGAGGAGACTTTGACTGGCCTCCCTTGACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR-3UTR GCA 90 bp GGAACTGAACCTGCAATGTCTTTGAGGTATGCCTCGACCTACCTCCTTAGGTTGCTCAGAGCAGGACCTTaGCTCTCCCCCAGGAAGACC +
Preference number: 2 (lower is better)
Translates to: GTEPAMSLRYASTYLLRLLRAGP*LSPRKT
Trigger: GGTCTTCCTGGGGGAGAGGCAAGGTCCTGCTCTGAG...CAACCTAAGGAGGTAGGTCGAGGCATACCTCAAAGACATTGCAGGTTCAGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR-3UTR GCA 90 bp GTCAAAGTCTCCTCCTGGAATGAAGAGCTCAGTGGCTCTCTGTTAACTCCACACTATGGGCTGCTGCCCTaGTTTGGAGAGAGCATCGGC +
Preference number: 2 (lower is better)
Translates to: VKVSSWNEELSGSLLTPHYGLLP*FGESIG
Trigger: GCCGATGCTCTCTCCAAAGCAGGGCAGCAGCCCATA...GTGTGGAGTTAACAGAGAGCCACTGAGCTCTTCATTCCAGGAGGAGACTTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR-3UTR CCA 90 bp GTGACTTGCCCAAGGGTGTCCCCTGGTTACCAGCCAAACTCGTGTGCCGGCTGTTCGTCTTGTGGTCAGTaGCAGAAAAATGCACATGAA +
Preference number: 2 (lower is better)
Translates to: VTCPRVSPGYQPNSCAGCSSCGQ*QKNAHE
Trigger: TTCATGTGCATTTTTCTGCCACTGACCACAAGACGA...ACAGCCGGCACACGAGTTTGGCTGGTAACCAGGGGACACCCTTGGGCAAGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR-3UTR CCA 90 bp TACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTGCCTCTCCAAAAATGCACATGAATaGAAAGGCCACTGGGGCTGT +
Preference number: 2 (lower is better)
Translates to: YQPNSCAGCNLRAGPCLSKNAHE*KGHWGC
Trigger: ACAGCCCCAGTGGCCTTTCCATTCATGTGCATTTTT...GGAGAGGCAAGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTGGCTGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR-3UTR TCA 90 bp TTGAGTGTTTATTGTGTACAAGGAGCTAATCCTCTGCCCTCTGAGGCTTTCAGATGGCTGGTGCCAGGATaGGCTAGCCAATCCCACGTG +
Preference number: 2 (lower is better)
Translates to: LSVYCVQGANPLPSEAFRWLVPG*ASQSHV
Trigger: CACGTGGGATTGGCTAGCTCATCCTGGCACCAGCCA...TCTGAAAGCCTCAGAGGGCAGAGGATTAGCTCCTTGTACACAATAAACACTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR-3UTR CCA 90 bp ACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGCCCCACTGTCATCAGATTCGGGGCTGTTGAGAATTaGGTGCTTATTGTACCCAGA +
Preference number: 2 (lower is better)
Translates to: TTSKGLVGTGNGPTVIRFGAVEN*VLIVPR
Trigger: TCTGGGTACAATAAGCACCCAATTCTCAACAGCCCC...GAATCTGATGACAGTGGGGCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR-3UTR CCA 90 bp TTGAGTGTTTATTGTGTACAAGGAGCTAATCCTCTGCCCTCTGAGGCTTTCAGAGCTGCTGCCCTGCTTTaGAGAGAGCATCGGCTGCTA +
Preference number: 2 (lower is better)
Translates to: LSVYCVQGANPLPSEAFRAAALL*REHRLL
Trigger: TAGCAGCCGATGCTCTCTCCAAAGCAGGGCAGCAGC...TCTGAAAGCCTCAGAGGGCAGAGGATTAGCTCCTTGTACACAATAAACACTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR-3UTR CCA 90 bp ACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGCCCCACTGTCATCAGATTCCAGGAAATCGTCTTGTaGTCAGTGGCAGAAAAATGC +
Preference number: 2 (lower is better)
Translates to: TTSKGLVGTGNGPTVIRFQEIVL*SVAEKC
Trigger: GCATTTTTCTGCCACTGACCACAAGACGATTTCCTG...GAATCTGATGACAGTGGGGCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR-3UTR GCA 90 bp GGAACTGAACCTGCAATGTCTTTGAGGTATGCCTCGACCTACCTCCTTAGGTTGCTGTTGAGAATTGGGTaGTTATTGTACCCAGAAGGC +
Preference number: 2 (lower is better)
Translates to: GTEPAMSLRYASTYLLRLLLRIG*LLYPEG
Trigger: GCCTTCTGGGTACAATAAGCACCCAATTCTCAACAG...CAACCTAAGGAGGTAGGTCGAGGCATACCTCAAAGACATTGCAGGTTCAGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR-3UTR CCA 90 bp ACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGCCCCACTGTCATCAGATTCCGTCAGGCCTTTATGTaGCACTTTCACTTTTCTTTT +
Preference number: 2 (lower is better)
Translates to: TTSKGLVGTGNGPTVIRFRQAFM*HFHFSF
Trigger: AAAAGAAAAGTGAAAGTGCCACATAAAGGCCTGACG...GAATCTGATGACAGTGGGGCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR CAA 90 bp GTGCATGCACAGACACAGACTCACACTGGAGTAAATAATACGAACTaGCTGGTGATTGAATCCCAAAGACAGCAATCCTGTGCTTGGAGG +
Preference number: 2 (lower is better)
Translates to: VHAQTQTHTGVNNTN*LVIESQRQQSCAWR
Trigger: CCTCCAAGCACAGGATTGCTGTCTTTGGGATTCAATCACCAGCAAGTTCGTATTATTTACTCCAGTGTGAGTCTGTGTCTGTGCATGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR CAA 90 bp GAACCTGCAATGTCTTTGAGGTATGCCTCGACCTACCTCCTTAGGTaGCTGTATGGATCCCATGAGACAGTAACTTATAGTAATGGCAGC +
Preference number: 2 (lower is better)
Translates to: EPAMSLRYASTYLLR*LYGSHETVTYSNGS
Trigger: GCTGCCATTACTATAAGTTACTGTCTCATGGGATCCATACAGCAACCTAAGGAGGTAGGTCGAGGCATACCTCAAAGACATTGCAGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR-3UTR CCA 90 bp TTTCAGGGAGAACTTGTAAAAGGGGAGCCAGTCCCAAGTCCGAAGGTATTATACCTCAGTAGGAGAACGTaGCTGATAAGACTCAGTGTG +
Preference number: 2 (lower is better)
Translates to: FQGELVKGEPVPSPKVLYLSRRT*LIRLSV
Trigger: CACACTGAGTCTTATCAGCCACGTTCTCCTACTGAG...GTATAATACCTTCGGACTTGGGACTGGCTCCCCTTTTACAAGTTCTCCCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR-3UTR CCA 90 bp TTGAGTGTTTATTGTGTACAAGGAGCTAATCCTCTGCCCTCTGAGGCTTTCAGACTTAGAGTGTCAGATTaGGTCAGAGTCAGGAATTCT +
Preference number: 2 (lower is better)
Translates to: LSVYCVQGANPLPSEAFRLRVSD*VRVRNS
Trigger: AGAATTCCTGACTCTGACCCAATCTGACACTCTAAG...TCTGAAAGCCTCAGAGGGCAGAGGATTAGCTCCTTGTACACAATAAACACTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR CCA 72 bp AGGCCGGGTGTCCCCATGTTGCCCAGGCTGGGTTCCTaGGTTCGTGGGCTCCTGAGCTCAAGCAGTCCACCC +
Preference number: 3 (lower is better)
Translates to: RPGVPMLPRLGS*VRGLLSSSSPP
Trigger: GGGTGGACTGCTTGAGCTCAGGAGCCCACGAACCCAGGAACCCAGCCTGGGCAACATGGGGACACCCGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR CCA 72 bp TGTCCCCATGTTGCCCAGGCTGGGTTCCTGGGTTCGTaGGCTCCTGAGCTCAAGCAGTCCACCCACCTTGTC +
Preference number: 3 (lower is better)
Translates to: CPHVAQAGFLGS*APELKQSTHLV
Trigger: GACAAGGTGGGTGGACTGCTTGAGCTCAGGAGCCCACGAACCCAGGAACCCAGCCTGGGCAACATGGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR-3UTR CAA 90 bp CCCCTGGTTACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTGGCTGCTGCCCTGCTTaGGAGAGAGCATCGGCTGCT +
Preference number: 3 (lower is better)
Translates to: PLVTSQTRVPAVISEQDLGCCPA*ERASAA
Trigger: AGCAGCCGATGCTCTCTCCAAAGCAGGGCAGCAGCC...AAGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTGGCTGGTAACCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR-3UTR CAA 90 bp GTGACTTGCCCAAGGGTGTCCCCTGGTTACCAGCCAAACTCGTGTGCCGGCTGTAGGCCACTGGGGCTGTaGAGAATTGGGTGCTTATTG +
Preference number: 3 (lower is better)
Translates to: VTCPRVSPGYQPNSCAGCRPLGL*RIGCLL
Trigger: CAATAAGCACCCAATTCTCAACAGCCCCAGTGGCCT...ACAGCCGGCACACGAGTTTGGCTGGTAACCAGGGGACACCCTTGGGCAAGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR GCA 72 bp TGCTTGGAGGGAGGGCATATTTCCAAGGTCCCCTCCTaGCAGCATATCCTGTCGTCAGGCCTTTATGTGGCA +
Preference number: 3 (lower is better)
Translates to: CLEGGHISKVPS*QHILSSGLYVA
Trigger: TGCCACATAAAGGCCTGACGACAGGATATGCTGGCAGGAGGGGACCTTGGAAATATGCCCTCCCTCCAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR GCA 72 bp AGAGCATCGGCTGCTACTCTTCACACCTCTTGTGACTaGCCTCTTTCAGGGAGAACTTGTAAAAGGGGAGCC +
Preference number: 3 (lower is better)
Translates to: RASAATLHTSCD*PLSGRTCKRGA
Trigger: GGCTCCCCTTTTACAAGTTCTCCCTGAAAGAGGGCAGTCACAAGAGGTGTGAAGAGTAGCAGCCGATGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR CCA 72 bp AGACTTGTGCCAGATACACAACTAGTAAGGGGCTGGTaGGAACCGGAAATGGCCCCACTGTCATCAGATTCC +
Preference number: 3 (lower is better)
Translates to: RLVPDTQLVRGW*EPEMAPLSSDS
Trigger: GGAATCTGATGACAGTGGGGCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGTGTATCTGGCACAAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR-3UTR CAA 90 bp TACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTGCCTCTCCTGTCTTAACCATCCTTaGGGAAGAAGGGCCTGTTTT +
Preference number: 3 (lower is better)
Translates to: YQPNSCAGCNLRAGPCLSCLNHP*GRRACF
Trigger: AAAACAGGCCCTTCTTCCCAAAGGATGGTTAAGACA...GGAGAGGCAAGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTGGCTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR-3UTR CAA 90 bp GGAACTGAACCTGCAATGTCTTTGAGGTATGCCTCGACCTACCTCCTTAGGTTGACAGCAATCCTGTGCTaGGAGGGAGGGCATATTTCC +
Preference number: 3 (lower is better)
Translates to: GTEPAMSLRYASTYLLRLTAILC*EGGHIS
Trigger: GGAAATATGCCCTCCCTCCAAGCACAGGATTGCTGT...CAACCTAAGGAGGTAGGTCGAGGCATACCTCAAAGACATTGCAGGTTCAGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR TCA 72 bp TCTTGTGTTGGTCTGGAACTGAACCTGCAATGTCTTTaGGGTATGCCTCGACCTACCTCCTTAGGTTGCTGT +
Preference number: 3 (lower is better)
Translates to: SCVGLELNLQCL*GMPRPTSLGCC
Trigger: ACAGCAACCTAAGGAGGTAGGTCGAGGCATACCTCAAAGACATTGCAGGTTCAGTTCCAGACCAACACAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR-3UTR CAA 90 bp TTTCAGGGAGAACTTGTAAAAGGGGAGCCAGTCCCAAGTCCGAAGGTATTATACTTTTCTCAGGGCTGTTaGGCTCACACAGTCCTGAAG +
Preference number: 3 (lower is better)
Translates to: FQGELVKGEPVPSPKVLYFSQGC*AHTVLK
Trigger: CTTCAGGACTGTGTGAGCCAAACAGCCCTGAGAAAA...GTATAATACCTTCGGACTTGGGACTGGCTCCCCTTTTACAAGTTCTCCCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR CCA 72 bp AGGATTACAAAACTCAGGAAATCGTCTTGTGGTCAGTaGCAGAAAAATGCACATGAATGGAAAGGCCACTGG +
Preference number: 3 (lower is better)
Translates to: RITKLRKSSCGQ*QKNAHEWKGHW
Trigger: CCAGTGGCCTTTCCATTCATGTGCATTTTTCTGCCACTGACCACAAGACGATTTCCTGAGTTTTGTAATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR GCA 72 bp ATAACATGGGGAATAATGACTCTTGCTTATCCATACTaGTGTGAGGAGCTCTTAATTAAAAAGGAGGCCAGG +
Preference number: 3 (lower is better)
Translates to: ITWGIMTLAYPY*CEELLIKKEAR
Trigger: CCTGGCCTCCTTTTTAATTAAGAGCTCCTCACAGCAGTATGGATAAGCAAGAGTCATTATTCCCCATGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR TCA 72 bp ACTTTTATATGCATTGGGAAACCAAAAACATTCATGTaGCTTGCTTTCTTGTGTTGGTCTGGAACTGAACCT +
Preference number: 3 (lower is better)
Translates to: TFICIGKPKTFM*LAFLCWSGTEP
Trigger: AGGTTCAGTTCCAGACCAACACAAGAAAGCAAGTCACATGAATGTTTTTGGTTTCCCAATGCATATAAAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp GTGACTTGCCCAAGGGTGTCCCCTGGTTACCAGCCAAACTCGTGTGCCGGCTGTGCCTGCTTCCTGGGCTaGCGCCGCTGGGTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: VTCPRVSPGYQPNSCAGCACFLG*RRWVQE
Trigger: CTCCTGGACCCAGCGGCGCCAGCCCAGGAAGCAGGC...ACAGCCGGCACACGAGTTTGGCTGGTAACCAGGGGACACCCTTGGGCAAGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp CCCCTGGTTACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTCGGGACTGGGTGTCCTaGACAGCTGCCGGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PLVTSQTRVPAVISEQDLRDWVS*TAAGAS
Trigger: GCTGGCCCCGGCAGCTGTGCAGGACACCCAGTCCCG...AAGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTGGCTGGTAACCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp GTGACTTGCCCAAGGGTGTCCCCTGGTTACCAGCCAAACTCGTGTGCCGGCTGTCCCAGGCTGGGTTCCTaGGTTCGTGGGCTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: VTCPRVSPGYQPNSCAGCPRLGS*VRGLLS
Trigger: GCTCAGGAGCCCACGAACCCAGGAACCCAGCCTGGG...ACAGCCGGCACACGAGTTTGGCTGGTAACCAGGGGACACCCTTGGGCAAGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp CCCCTGGTTACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTCACCTTCTGGTGGCCTaGTTCCTGGGCTGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: PLVTSQTRVPAVISEQDLHLLVA*FLGWRR
Trigger: GCGGCGCCAGCCCAGGAAGCAGGCCACCAGAAGGTG...AAGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTGGCTGGTAACCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp CCCCTGGTTACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTCCGGCCGCCACACCATaGTGGACGGCACCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: PLVTSQTRVPAVISEQDLPAATP*WTAPSA
Trigger: TGCTGAGGGTGCCGTCCACCATGGTGTGGCGGCCGG...AAGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTGGCTGGTAACCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp GTGACTTGCCCAAGGGTGTCCCCTGGTTACCAGCCAAACTCGTGTGCCGGCTGTGAGTGGAGGGGTGGCTaGTGCCAGGATGAGCTAGCC +
Preference number: 4 (lower is better)
Translates to: VTCPRVSPGYQPNSCAGCEWRGG*CQDELA
Trigger: GGCTAGCTCATCCTGGCACCAGCCACCCCTCCACTC...ACAGCCGGCACACGAGTTTGGCTGGTAACCAGGGGACACCCTTGGGCAAGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp GTGACTTGCCCAAGGGTGTCCCCTGGTTACCAGCCAAACTCGTGTGCCGGCTGTCCGCGGGCCGCAGGTTaGGGTCGTAGTTTTGCATCA +
Preference number: 4 (lower is better)
Translates to: VTCPRVSPGYQPNSCAGCPRAAG*GRSFAS
Trigger: TGATGCAAAACTACGACCCCAACCTGCGGCCCGCGG...ACAGCCGGCACACGAGTTTGGCTGGTAACCAGGGGACACCCTTGGGCAAGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp TGGGGTCAAGGGAGGCCAGTCAAAGTCTCCTCCTGGAATGAAGAGCTCAGTGGCGGGGGAGATGCCAGCTaGTATGGGCTGCTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: WGQGRPVKVSSWNEELSGGGDAS*YGLLPC
Trigger: GCAGGGCAGCAGCCCATACCAGCTGGCATCTCCCCC...GCCACTGAGCTCTTCATTCCAGGAGGAGACTTTGACTGGCCTCCCTTGACCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR TCA 90 bp GTGACTTGCCCAAGGGTGTCCCCTGGTTACCAGCCAAACTCGTGTGCCGGCTGTTCCAGACATTGGTGGTaGGGGCTTCCTCTCGCTCGT +
Preference number: 4 (lower is better)
Translates to: VTCPRVSPGYQPNSCAGCSRHWW*GLPLAR
Trigger: ACGAGCGAGAGGAAGCCCTCACCACCAATGTCTGGA...ACAGCCGGCACACGAGTTTGGCTGGTAACCAGGGGACACCCTTGGGCAAGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR TCA 90 bp TACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTGCCTCTCCCCTCCTCCCCAGTTGTaGTCGACCATCCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: YQPNSCAGCNLRAGPCLSPPPQL*STIPRS
Trigger: GCTCCTCGGGATGGTCGATCACAACTGGGGAGGAGG...GGAGAGGCAAGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTGGCTGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp AGTCCTGAAGGGCACTTCCCAAAGAGCACACTTAGGACCTCAGTAGGAGAACGTGGTGTCCTGCACAGCTaGCGGGGCCAGCGGGCGAAC +
Preference number: 4 (lower is better)
Translates to: SPEGHFPKSTLRTSVGERGVLHS*RGQRAN
Trigger: GTTCGCCCGCTGGCCCCGGCAGCTGTGCAGGACACC...ACGTTCTCCTACTGAGGTCCTAAGTGTGCTCTTTGGGAAGTGCCCTTCAGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp ACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGCCCCACTGTCATCAGATTCGCCGCCACCAGCCCTTaGCGCTGCCACTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: TTSKGLVGTGNGPTVIRFAATSP*RCHCWK
Trigger: CTTCCAGCAGTGGCAGCGGCAAGGGCTGGTGGCGGC...GAATCTGATGACAGTGGGGCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp AGTCCTGAAGGGCACTTCCCAAAGAGCACACTTAGGACCTCAGTAGGAGAACGTTCCTGGTTCCGGCCCTaGGCCCCCAGGCAGACAGCC +
Preference number: 4 (lower is better)
Translates to: SPEGHFPKSTLRTSVGERSWFRP*APRQTA
Trigger: GGCTGTCTGCCTGGGGGCCCAGGGCCGGAACCAGGA...ACGTTCTCCTACTGAGGTCCTAAGTGTGCTCTTTGGGAAGTGCCCTTCAGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp GCTCTTCCTTGTCTTAACCATCCTTTGGGAAGAAGGGCCTGTTTTTCAGGCCGTAGCAGGCGCTCCTCCTaGTTCCGGCCCTGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: ALPCLNHPLGRRACFSGRSRRSS*FRPWAP
Trigger: GGGGGCCCAGGGCCGGAACCAGGAGGAGCGCCTGCT...ACGGCCTGAAAAACAGGCCCTTCTTCCCAAAGGATGGTTAAGACAAGGAAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp ACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGCCCCACTGTCATCAGATTCCTGGGCTGGCGCCGCTaGGTCCAGGAGCATCTTGGC +
Preference number: 4 (lower is better)
Translates to: TTSKGLVGTGNGPTVIRFLGWRR*VQEHLG
Trigger: GCCAAGATGCTCCTGGACCCAGCGGCGCCAGCCCAG...GAATCTGATGACAGTGGGGCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp CTGCTTTGGAGAGAGCATCGGCTGCTACTCTTCACACCTCTTGTGACTGCCCTCGCTTCCACACAGGCCTaGATGGCTGGGGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LLWREHRLLLFTPLVTALASTQA*MAGAAC
Trigger: GCAGGCTGCCCCAGCCATCCAGGCCTGTGTGGAAGC...GAGGGCAGTCACAAGAGGTGTGAAGAGTAGCAGCCGATGCTCTCTCCAAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp ACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGCCCCACTGTCATCAGATTCAGGAGCAGCGGCCCCTaGCCCCCATGCATGGTGCCT +
Preference number: 4 (lower is better)
Translates to: TTSKGLVGTGNGPTVIRFRSSGP*PPCMVP
Trigger: AGGCACCATGCATGGGGGCCAGGGGCCGCTGCTCCT...GAATCTGATGACAGTGGGGCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp CCCCTGGTTACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTCCATGTTGCCCAGGCTaGGTTCCTGGGTTCGTGGGC +
Preference number: 4 (lower is better)
Translates to: PLVTSQTRVPAVISEQDLPCCPG*VPGFVG
Trigger: GCCCACGAACCCAGGAACCCAGCCTGGGCAACATGG...AAGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTGGCTGGTAACCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR TCA 90 bp TGGGGTCAAGGGAGGCCAGTCAAAGTCTCCTCCTGGAATGAAGAGCTCAGTGGCTGGCTGGTGCCAGGATaGGCTAGCCAATCCCACGTG +
Preference number: 4 (lower is better)
Translates to: WGQGRPVKVSSWNEELSGWLVPG*ASQSHV
Trigger: CACGTGGGATTGGCTAGCTCATCCTGGCACCAGCCA...GCCACTGAGCTCTTCATTCCAGGAGGAGACTTTGACTGGCCTCCCTTGACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR TCA 90 bp CCCCTGGTTACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTCTCAGGGAGCATAGGTaGCTTGCCCAAGGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: PLVTSQTRVPAVISEQDLLREHR*LAQGCP
Trigger: GGGACACCCTTGGGCAAGTCACCTATGCTCCCTGAG...AAGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTGGCTGGTAACCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp CCCCTGGTTACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTATCTTGGCTGGTCGGTaGTGGATGGCCCACTCCCCA +
Preference number: 4 (lower is better)
Translates to: PLVTSQTRVPAVISEQDLILAGR*WMAHSP
Trigger: TGGGGAGTGGGCCATCCAGCACCGACCAGCCAAGAT...AAGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTGGCTGGTAACCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp TGGGGTCAAGGGAGGCCAGTCAAAGTCTCCTCCTGGAATGAAGAGCTCAGTGGCATGGCTGGGGCAGCCTaGTTCAGGCTGCCACAGAAC +
Preference number: 4 (lower is better)
Translates to: WGQGRPVKVSSWNEELSGMAGAA*FRLPQN
Trigger: GTTCTGTGGCAGCCTGAAGCAGGCTGCCCCAGCCAT...GCCACTGAGCTCTTCATTCCAGGAGGAGACTTTGACTGGCCTCCCTTGACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp TACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTGCCTCTCCGGTGCCTCAGCTCTCTaGAGTGACAGGGGTGGGACA +
Preference number: 4 (lower is better)
Translates to: YQPNSCAGCNLRAGPCLSGASAL*SDRGGT
Trigger: TGTCCCACCCCTGTCACTGCAGAGAGCTGAGGCACC...GGAGAGGCAAGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTGGCTGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp TACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTGCCTCTCCCTCAGAGCAGGACCTTaGCTCTCCCCCAGGAAGACC +
Preference number: 4 (lower is better)
Translates to: YQPNSCAGCNLRAGPCLSLRAGP*LSPRKT
Trigger: GGTCTTCCTGGGGGAGAGGCAAGGTCCTGCTCTGAG...GGAGAGGCAAGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTGGCTGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp TACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTGCCTCTCCCTGGTCGGTGCTGGATaGCCCACTCCCCATTCTCTG +
Preference number: 4 (lower is better)
Translates to: YQPNSCAGCNLRAGPCLSLVGAG*PTPHSL
Trigger: CAGAGAATGGGGAGTGGGCCATCCAGCACCGACCAG...GGAGAGGCAAGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTGGCTGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp CCCCTGGTTACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTGGTCCAGGAGCATCTTaGCTGGTCGGTGCTGGATGG +
Preference number: 4 (lower is better)
Translates to: PLVTSQTRVPAVISEQDLGPGAS*LVGAGW
Trigger: CCATCCAGCACCGACCAGCCAAGATGCTCCTGGACC...AAGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTGGCTGGTAACCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp ACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGCCCCACTGTCATCAGATTCGGGGAGTGCACTGAGTaGAGGGGTGGCTGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: TTSKGLVGTGNGPTVIRFGECTE*RGGWCQ
Trigger: CTGGCACCAGCCACCCCTCCACTCAGTGCACTCCCC...GAATCTGATGACAGTGGGGCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR TCA 90 bp TGGGGTCAAGGGAGGCCAGTCAAAGTCTCCTCCTGGAATGAAGAGCTCAGTGGCGGGGAAGTAGGTGACTaGGATAGAGCAGGCGGAACG +
Preference number: 4 (lower is better)
Translates to: WGQGRPVKVSSWNEELSGGEVGD*DRAGGT
Trigger: CGTTCCGCCTGCTCTATCTCAGTCACCTACTTCCCC...GCCACTGAGCTCTTCATTCCAGGAGGAGACTTTGACTGGCCTCCCTTGACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp AGTCCTGAAGGGCACTTCCCAAAGAGCACACTTAGGACCTCAGTAGGAGAACGTGCCTCAGGAACACCTTaGGGACCCCTCGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: SPEGHFPKSTLRTSVGERASGTP*GPLGPW
Trigger: CCATGGCCCGAGGGGTCCGCAAGGTGTTCCTGAGGC...ACGTTCTCCTACTGAGGTCCTAAGTGTGCTCTTTGGGAAGTGCCCTTCAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp GGAACTGAACCTGCAATGTCTTTGAGGTATGCCTCGACCTACCTCCTTAGGTTGGCCAGCGGGCGAACGTaGATCCTCAGCAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GTEPAMSLRYASTYLLRLASGRT*ILSSWG
Trigger: GCCCCAGCTGCTGAGGATGCACGTTCGCCCGCTGGC...CAACCTAAGGAGGTAGGTCGAGGCATACCTCAAAGACATTGCAGGTTCAGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp AGTCCTGAAGGGCACTTCCCAAAGAGCACACTTAGGACCTCAGTAGGAGAACGTCGGGTGTCCCCATGTTaGCCAGGCTGGGTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SPEGHFPKSTLRTSVGERRVSPC*PGWVPG
Trigger: CCCAGGAACCCAGCCTGGGCAACATGGGGACACCCG...ACGTTCTCCTACTGAGGTCCTAAGTGTGCTCTTTGGGAAGTGCCCTTCAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp TGGTGCCAGGATGAGCTAGCCAATCCCACGTGTGTGCTGACTGCAGCAGGACACTCCAAGGTCCCCTCCTaGCAGCATATCCTGTCGTCA +
Preference number: 4 (lower is better)
Translates to: WCQDELANPTCVLTAAGHSKVPS*QHILSS
Trigger: TGACGACAGGATATGCTGGCAGGAGGGGACCTTGGA...GTGTCCTGCTGCAGTCAGCACACACGTGGGATTGGCTAGCTCATCCTGGCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp CGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTGATTGAAGTTCTCCCCCACTTGGCTGGTCGGTGCTaGATGGCCCACTCCCCATTC +
Preference number: 4 (lower is better)
Translates to: RKWPHCHQIPSLIEVLPHLAGRC*MAHSPF
Trigger: GAATGGGGAGTGGGCCATCCAGCACCGACCAGCCAA...GTGGGGGAGAACTTCAATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp TGGTGCCAGGATGAGCTAGCCAATCCCACGTGTGTGCTGACTGCAGCAGGACACGTACTTGCTGATGAGTaGCACCGCCTGGGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: WCQDELANPTCVLTAAGHVLADE*HRLGGF
Trigger: GAAACCTCCCAGGCGGTGCCACTCATCAGCAAGTAC...GTGTCCTGCTGCAGTCAGCACACACGTGGGATTGGCTAGCTCATCCTGGCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp ACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGCCCCACTGTCATCAGATTCGGACCCCTCGGGCCATaGAGTGTGTGTGTGGAGACC +
Preference number: 4 (lower is better)
Translates to: TTSKGLVGTGNGPTVIRFGPLGP*SVCVET
Trigger: GGTCTCCACACACACACTCCATGGCCCGAGGGGTCC...GAATCTGATGACAGTGGGGCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp TACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTGCCTCTCCTGCATCCTCAGCAGCTaGGGCAAGAGCCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: YQPNSCAGCNLRAGPCLSCILSS*GKSLRN
Trigger: GTTCCTGAGGCTCTTGCCCCAGCTGCTGAGGATGCA...GGAGAGGCAAGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTGGCTGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp TACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTGCCTCTCCCCCAAGGGTGTCCCCTaGTTACCAGCCAAACTCGTG +
Preference number: 4 (lower is better)
Translates to: YQPNSCAGCNLRAGPCLSPKGVP*LPAKLV
Trigger: CACGAGTTTGGCTGGTAACCAGGGGACACCCTTGGG...GGAGAGGCAAGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTGGCTGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR TCA 90 bp CCCCTGGTTACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTTGGCTCACACAGTCCTaGAGGGCACTTCCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: PLVTSQTRVPAVISEQDLWLTQS*RALPKE
Trigger: CTCTTTGGGAAGTGCCCTTCAGGACTGTGTGAGCCA...AAGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTGGCTGGTAACCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR TCA 90 bp CGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTGATTGAAGTTCTCCCCCACATCCCACGTGTGTGCTaGCTGCAGCAGGACACTAGC +
Preference number: 4 (lower is better)
Translates to: RKWPHCHQIPSLIEVLPHIPRVC*LQQDTS
Trigger: GCTAGTGTCCTGCTGCAGTCAGCACACACGTGGGAT...GTGGGGGAGAACTTCAATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp GGAACTGAACCTGCAATGTCTTTGAGGTATGCCTCGACCTACCTCCTTAGGTTGGGCCCCTGGCCCCCATaGATGGTGCCTCAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: GTEPAMSLRYASTYLLRLGPWPP*MVPQLS
Trigger: AGAGAGCTGAGGCACCATGCATGGGGGCCAGGGGCC...CAACCTAAGGAGGTAGGTCGAGGCATACCTCAAAGACATTGCAGGTTCAGTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp CCCCTGGTTACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTTGTGTGACTCCCACATaGCCCACAGTGGTTGGTTGG +
Preference number: 4 (lower is better)
Translates to: PLVTSQTRVPAVISEQDLCVTPT*PTVVGW
Trigger: CCAACCAACCACTGTGGGGCATGTGGGAGTCACACA...AAGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTGGCTGGTAACCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp CTGCTTTGGAGAGAGCATCGGCTGCTACTCTTCACACCTCTTGTGACTGCCCTCTATGGGCTGCTGCCCTaGTTTGGAGAGAGCATCGGC +
Preference number: 4 (lower is better)
Translates to: LLWREHRLLLFTPLVTALYGLLP*FGESIG
Trigger: GCCGATGCTCTCTCCAAAGCAGGGCAGCAGCCCATA...GAGGGCAGTCACAAGAGGTGTGAAGAGTAGCAGCCGATGCTCTCTCCAAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp CCCCTGGTTACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTATGATCACAGCTCACTaGAGCCTAGACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PLVTSQTRVPAVISEQDLMITAH*SLDLLG
Trigger: GCCCAGGAGGTCTAGGCTGCAGTGAGCTGTGATCAT...AAGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTGGCTGGTAACCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp ACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGCCCCACTGTCATCAGATTCCAGGAGCATCTTGGCTaGTCGGTGCTGGATGGCCCA +
Preference number: 4 (lower is better)
Translates to: TTSKGLVGTGNGPTVIRFQEHLG*SVLDGP
Trigger: TGGGCCATCCAGCACCGACCAGCCAAGATGCTCCTG...GAATCTGATGACAGTGGGGCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp TGGTGCCAGGATGAGCTAGCCAATCCCACGTGTGTGCTGACTGCAGCAGGACACAAGAGGAAGACAGTCTaGGCCAGGAGCACGTTGATG +
Preference number: 4 (lower is better)
Translates to: WCQDELANPTCVLTAAGHKRKTV*ARSTLM
Trigger: CATCAACGTGCTCCTGGCCCAGACTGTCTTCCTCTT...GTGTCCTGCTGCAGTCAGCACACACGTGGGATTGGCTAGCTCATCCTGGCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp CGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTGATTGAAGTTCTCCCCCACGCTGCTGCCCTGCTTTaGAGAGAGCATCGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: RKWPHCHQIPSLIEVLPHAAALL*REHRLL
Trigger: TAGCAGCCGATGCTCTCTCCAAAGCAGGGCAGCAGC...GTGGGGGAGAACTTCAATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR TCA 90 bp AGTCCTGAAGGGCACTTCCCAAAGAGCACACTTAGGACCTCAGTAGGAGAACGTGGGCCAGGAGCACGTTaGTGGCGACGGTACACTTCT +
Preference number: 4 (lower is better)
Translates to: SPEGHFPKSTLRTSVGERGPGAR*WRRYTS
Trigger: AGAAGTGTACCGTCGCCATCAACGTGCTCCTGGCCC...ACGTTCTCCTACTGAGGTCCTAAGTGTGCTCTTTGGGAAGTGCCCTTCAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR TCA 90 bp GCTCTTCCTTGTCTTAACCATCCTTTGGGAAGAAGGGCCTGTTTTTCAGGCCGTGCCGGGCACAGGCAATaGGGTTGCAGGCTTCCACAC +
Preference number: 4 (lower is better)
Translates to: ALPCLNHPLGRRACFSGRAGHRQ*GCRLPH
Trigger: GTGTGGAAGCCTGCAACCTCATTGCCTGTGCCCGGC...ACGGCCTGAAAAACAGGCCCTTCTTCCCAAAGGATGGTTAAGACAAGGAAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR TCA 90 bp CTGCTTTGGAGAGAGCATCGGCTGCTACTCTTCACACCTCTTGTGACTGCCCTCAGGTTGAGGCTGCAGTaGGCCATGATCATGCCACTC +
Preference number: 4 (lower is better)
Translates to: LLWREHRLLLFTPLVTALRLRLQ*AMIMPL
Trigger: GAGTGGCATGATCATGGCTCACTGCAGCCTCAACCT...GAGGGCAGTCACAAGAGGTGTGAAGAGTAGCAGCCGATGCTCTCTCCAAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR TCA 90 bp TGGGGTCAAGGGAGGCCAGTCAAAGTCTCCTCCTGGAATGAAGAGCTCAGTGGCAGTGGGAGGATCACTTaGGCTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: WGQGRPVKVSSWNEELSGSGRIT*AQEFKT
Trigger: GGTCTTGAACTCCTGAGCTCAAGTGATCCTCCCACT...GCCACTGAGCTCTTCATTCCAGGAGGAGACTTTGACTGGCCTCCCTTGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR TCA 90 bp CGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTGATTGAAGTTCTCCCCCACCCCAGCCTTACTACCTaGTTAGTGGGGTCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: RKWPHCHQIPSLIEVLPHPSLTT*LVGSRE
Trigger: CTCCCTTGACCCCACTAATCAGGTAGTAAGGCTGGG...GTGGGGGAGAACTTCAATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR TCA 90 bp GCTCTTCCTTGTCTTAACCATCCTTTGGGAAGAAGGGCCTGTTTTTCAGGCCGTGGGTTCGTGGGCTCCTaGGCTCAAGCAGTCCACCCA +
Preference number: 4 (lower is better)
Translates to: ALPCLNHPLGRRACFSGRGFVGS*AQAVHP
Trigger: TGGGTGGACTGCTTGAGCTCAGGAGCCCACGAACCC...ACGGCCTGAAAAACAGGCCCTTCTTCCCAAAGGATGGTTAAGACAAGGAAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp AGTCCTGAAGGGCACTTCCCAAAGAGCACACTTAGGACCTCAGTAGGAGAACGTACCAGCCCTTGCCGCTaGCACTGCTGGAAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: SPEGHFPKSTLRTSVGERTSPCR*HCWKRS
Trigger: ACTCCTCTTCCAGCAGTGGCAGCGGCAAGGGCTGGT...ACGTTCTCCTACTGAGGTCCTAAGTGTGCTCTTTGGGAAGTGCCCTTCAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp ACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGCCCCACTGTCATCAGATTCGGGACACGAGCACATTaGAGTAGAGGGCCACCTCGA +
Preference number: 4 (lower is better)
Translates to: TTSKGLVGTGNGPTVIRFGTRAH*SRGPPR
Trigger: TCGAGGTGGCCCTCTACTGCAATGTGCTCGTGTCCC...GAATCTGATGACAGTGGGGCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp ACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGCCCCACTGTCATCAGATTCGCTGGTATGGGCTGCTaGCCTGCTTTGGAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: TTSKGLVGTGNGPTVIRFAGMGC*PALERA
Trigger: TGCTCTCTCCAAAGCAGGGCAGCAGCCCATACCAGC...GAATCTGATGACAGTGGGGCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp GCTCTTCCTTGTCTTAACCATCCTTTGGGAAGAAGGGCCTGTTTTTCAGGCCGTGCGACGGTACACTTCTaGCCCCCAGCCTTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: ALPCLNHPLGRRACFSGRATVHF*PPALAG
Trigger: TCCTGCCAAGGCTGGGGGCCAGAAGTGTACCGTCGC...ACGGCCTGAAAAACAGGCCCTTCTTCCCAAAGGATGGTTAAGACAAGGAAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp AGTCCTGAAGGGCACTTCCCAAAGAGCACACTTAGGACCTCAGTAGGAGAACGTAGGCTGCCACAGAACTaGCTCAGCCCTAACTCCGGG +
Preference number: 4 (lower is better)
Translates to: SPEGHFPKSTLRTSVGERRLPQN*LSPNSG
Trigger: CCCGGAGTTAGGGCTGAGCCAGTTCTGTGGCAGCCT...ACGTTCTCCTACTGAGGTCCTAAGTGTGCTCTTTGGGAAGTGCCCTTCAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp GTGACTTGCCCAAGGGTGTCCCCTGGTTACCAGCCAAACTCGTGTGCCGGCTGTGGGGCTGTTGAGAATTaGGTGCTTATTGTACCCAGA +
Preference number: 4 (lower is better)
Translates to: VTCPRVSPGYQPNSCAGCGAVEN*VLIVPR
Trigger: TCTGGGTACAATAAGCACCCAATTCTCAACAGCCCC...ACAGCCGGCACACGAGTTTGGCTGGTAACCAGGGGACACCCTTGGGCAAGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR TCA 90 bp GGAACTGAACCTGCAATGTCTTTGAGGTATGCCTCGACCTACCTCCTTAGGTTGGGGGCTTGCGCTGGATaGGCAGGTAGAACACCACCT +
Preference number: 4 (lower is better)
Translates to: GTEPAMSLRYASTYLLRLGACAG*AGRTPP
Trigger: AGGTGGTGTTCTACCTGCTCATCCAGCGCAAGCCCC...CAACCTAAGGAGGTAGGTCGAGGCATACCTCAAAGACATTGCAGGTTCAGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR TCA 90 bp TACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTGCCTCTCCACCGCAAGGAGACATTaGGCACAACCACAGCATTCA +
Preference number: 4 (lower is better)
Translates to: YQPNSCAGCNLRAGPCLSTARRH*AQPQHS
Trigger: TGAATGCTGTGGTTGTGCTCAATGTCTCCTTGCGGT...GGAGAGGCAAGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTGGCTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp GGAACTGAACCTGCAATGTCTTTGAGGTATGCCTCGACCTACCTCCTTAGGTTGCAGCCTGCTTCAGGCTaGCACAGAACTGGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: GTEPAMSLRYASTYLLRLQPASG*HRTGSA
Trigger: GGCTGAGCCAGTTCTGTGGCAGCCTGAAGCAGGCTG...CAACCTAAGGAGGTAGGTCGAGGCATACCTCAAAGACATTGCAGGTTCAGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp AGTCCTGAAGGGCACTTCCCAAAGAGCACACTTAGGACCTCAGTAGGAGAACGTTGGAGGGGTGGCTGGTaGCAGGATGAGCTAGCCAAT +
Preference number: 4 (lower is better)
Translates to: SPEGHFPKSTLRTSVGERWRGGW*QDELAN
Trigger: ATTGGCTAGCTCATCCTGGCACCAGCCACCCCTCCA...ACGTTCTCCTACTGAGGTCCTAAGTGTGCTCTTTGGGAAGTGCCCTTCAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp CCCCTGGTTACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTCACACCTCTTGTGACTaGCCTCTTTCAGGGAGAACT +
Preference number: 4 (lower is better)
Translates to: PLVTSQTRVPAVISEQDLHTSCD*PLSGRT
Trigger: AGTTCTCCCTGAAAGAGGGCAGTCACAAGAGGTGTG...AAGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTGGCTGGTAACCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp TACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTGCCTCTCCAAGGAGCTAATCCTCTaGCCTCTGAGGCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: YQPNSCAGCNLRAGPCLSKELIL*PLRLSE
Trigger: CTCTGAAAGCCTCAGAGGGCAGAGGATTAGCTCCTT...GGAGAGGCAAGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTGGCTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp GGAACTGAACCTGCAATGTCTTTGAGGTATGCCTCGACCTACCTCCTTAGGTTGAACACCACCTTCTGGTaGCCTGCTTCCTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GTEPAMSLRYASTYLLRLNTTFW*PASWAG
Trigger: GCCAGCCCAGGAAGCAGGCCACCAGAAGGTGGTGTT...CAACCTAAGGAGGTAGGTCGAGGCATACCTCAAAGACATTGCAGGTTCAGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp AGTCCTGAAGGGCACTTCCCAAAGAGCACACTTAGGACCTCAGTAGGAGAACGTATGAGTGGCACCGCCTaGGAGGTTTCAGGCACCTTC +
Preference number: 4 (lower is better)
Translates to: SPEGHFPKSTLRTSVGERMSGTA*EVSGTF
Trigger: GAAGGTGCCTGAAACCTCCCAGGCGGTGCCACTCAT...ACGTTCTCCTACTGAGGTCCTAAGTGTGCTCTTTGGGAAGTGCCCTTCAGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp GCTCTTCCTTGTCTTAACCATCCTTTGGGAAGAAGGGCCTGTTTTTCAGGCCGTTTCTGTAGCCGGGACTaGGTGTCCTGCACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: ALPCLNHPLGRRACFSGRFCSRD*VSCTAA
Trigger: GGCAGCTGTGCAGGACACCCAGTCCCGGCTACAGAA...ACGGCCTGAAAAACAGGCCCTTCTTCCCAAAGGATGGTTAAGACAAGGAAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp CTGCTTTGGAGAGAGCATCGGCTGCTACTCTTCACACCTCTTGTGACTGCCCTCAGCCTCCCGAGTAACTaGGACTACAGGCATGCATCA +
Preference number: 4 (lower is better)
Translates to: LLWREHRLLLFTPLVTALSLPSN*DYRHAS
Trigger: TGATGCATGCCTGTAGTCCCAGTTACTCGGGAGGCT...GAGGGCAGTCACAAGAGGTGTGAAGAGTAGCAGCCGATGCTCTCTCCAAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR TCA 90 bp GTCAAAGTCTCCTCCTGGAATGAAGAGCTCAGTGGCTCTCTGTTAACTCCACACGGTTGTAGTGGGCCATaGGGAAGATGCCAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: VKVSSWNEELSGSLLTPHGCSGP*GRCQLC
Trigger: GCACAGCTGGCATCTTCCTCATGGCCCACTACAACC...GTGTGGAGTTAACAGAGAGCCACTGAGCTCTTCATTCCAGGAGGAGACTTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR TCA 90 bp TTGAGTGTTTATTGTGTACAAGGAGCTAATCCTCTGCCCTCTGAGGCTTTCAGAGTTGGCTCAGTCTGGTaGGGGCAGGTAGGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LSVYCVQGANPLPSEAFRVGSVW*GQVGAW
Trigger: CCACGCCCCTACCTGCCCTCACCAGACTGAGCCAAC...TCTGAAAGCCTCAGAGGGCAGAGGATTAGCTCCTTGTACACAATAAACACTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR TCA 90 bp CTGCTTTGGAGAGAGCATCGGCTGCTACTCTTCACACCTCTTGTGACTGCCCTCCACCTTATTTACAGATaGGGGAACAGCCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LLWREHRLLLFTPLVTALHLIYR*GNSLRE
Trigger: CTCCCTGAGGCTGTTCCCTCATCTGTAAATAAGGTG...GAGGGCAGTCACAAGAGGTGTGAAGAGTAGCAGCCGATGCTCTCTCCAAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR TCA 90 bp CTGCTTTGGAGAGAGCATCGGCTGCTACTCTTCACACCTCTTGTGACTGCCCTCATCAGATTCCCTCCCTaGTTGAAGTTCTCCCCCACT +
Preference number: 4 (lower is better)
Translates to: LLWREHRLLLFTPLVTALIRFPP*LKFSPT
Trigger: AGTGGGGGAGAACTTCAATCAGGGAGGGAATCTGAT...GAGGGCAGTCACAAGAGGTGTGAAGAGTAGCAGCCGATGCTCTCTCCAAAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp GTCAAAGTCTCCTCCTGGAATGAAGAGCTCAGTGGCTCTCTGTTAACTCCACACGTTTTGCATCAGGTCTaGGAGCAGGCGCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: VKVSSWNEELSGSLLTPHVLHQV*EQALLL
Trigger: CAGGAGGAGCGCCTGCTCGCAGACCTGATGCAAAAC...GTGTGGAGTTAACAGAGAGCCACTGAGCTCTTCATTCCAGGAGGAGACTTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp GGAACTGAACCTGCAATGTCTTTGAGGTATGCCTCGACCTACCTCCTTAGGTTGCCTTGCCGCTGCCACTaGTGGAAGAGGAGTTCACTG +
Preference number: 4 (lower is better)
Translates to: GTEPAMSLRYASTYLLRLPCRCH*WKRSSL
Trigger: CAGTGAACTCCTCTTCCAGCAGTGGCAGCGGCAAGG...CAACCTAAGGAGGTAGGTCGAGGCATACCTCAAAGACATTGCAGGTTCAGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp GCTCTTCCTTGTCTTAACCATCCTTTGGGAAGAAGGGCCTGTTTTTCAGGCCGTCACGTGTGTGCTGACTaGAGCAGGACACTAGCCACG +
Preference number: 4 (lower is better)
Translates to: ALPCLNHPLGRRACFSGRHVCAD*SRTLAT
Trigger: CGTGGCTAGTGTCCTGCTGCAGTCAGCACACACGTG...ACGGCCTGAAAAACAGGCCCTTCTTCCCAAAGGATGGTTAAGACAAGGAAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp ACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGCCCCACTGTCATCAGATTCGGAGAGAGCATCGGCTaGTACTCTTCACACCTCTTG +
Preference number: 4 (lower is better)
Translates to: TTSKGLVGTGNGPTVIRFGESIG*YSSHLL
Trigger: CAAGAGGTGTGAAGAGTAGCAGCCGATGCTCTCTCC...GAATCTGATGACAGTGGGGCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp TTTCAGGGAGAACTTGTAAAAGGGGAGCCAGTCCCAAGTCCGAAGGTATTATACTGGATCTCCAGGGAATaGCAGGGCCGGCACCCGGTT +
Preference number: 4 (lower is better)
Translates to: FQGELVKGEPVPSPKVLYWISRE*QGRHPV
Trigger: AACCGGGTGCCGGCCCTGCCATTCCCTGGAGATCCA...GTATAATACCTTCGGACTTGGGACTGGCTCCCCTTTTACAAGTTCTCCCTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp GGAACTGAACCTGCAATGTCTTTGAGGTATGCCTCGACCTACCTCCTTAGGTTGCCCACAGTGGTTGGTTaGCTCAGTCTGGTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: GTEPAMSLRYASTYLLRLPTVVG*LSLVRA
Trigger: TGCCCTCACCAGACTGAGCCAACCAACCACTGTGGG...CAACCTAAGGAGGTAGGTCGAGGCATACCTCAAAGACATTGCAGGTTCAGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp TGGTGCCAGGATGAGCTAGCCAATCCCACGTGTGTGCTGACTGCAGCAGGACACAAAAATGCACATGAATaGAAAGGCCACTGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: WCQDELANPTCVLTAAGHKNAHE*KGHWGC
Trigger: ACAGCCCCAGTGGCCTTTCCATTCATGTGCATTTTT...GTGTCCTGCTGCAGTCAGCACACACGTGGGATTGGCTAGCTCATCCTGGCACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR TCA 90 bp ACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGCCCCACTGTCATCAGATTCAGGCCTCAGGGTCAATaGAAATCCACTCGATGGTCT +
Preference number: 4 (lower is better)
Translates to: TTSKGLVGTGNGPTVIRFRPQGQ*KSTRWS
Trigger: AGACCATCGAGTGGATTTTCATTGACCCTGAGGCCT...GAATCTGATGACAGTGGGGCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR TCA 90 bp GTCAAAGTCTCCTCCTGGAATGAAGAGCTCAGTGGCTCTCTGTTAACTCCACACCAGGAAGGAAGTGGATaGGGATGGCGACAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: VKVSSWNEELSGSLLTPHQEGSG*GWRQRR
Trigger: TCTCCTCTGTCGCCATCCTCATCCACTTCCTTCCTG...GTGTGGAGTTAACAGAGAGCCACTGAGCTCTTCATTCCAGGAGGAGACTTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR TCA 90 bp AGTCCTGAAGGGCACTTCCCAAAGAGCACACTTAGGACCTCAGTAGGAGAACGTCAGCATTCACGACAATaGGGATGGTCACCACCAGGA +
Preference number: 4 (lower is better)
Translates to: SPEGHFPKSTLRTSVGERQHSRQ*GWSPPG
Trigger: TCCTGGTGGTGACCATCCTCATTGTCGTGAATGCTG...ACGTTCTCCTACTGAGGTCCTAAGTGTGCTCTTTGGGAAGTGCCCTTCAGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR TCA 90 bp CGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTGATTGAAGTTCTCCCCCACGTGTTGGTCTGGAACTaGACCTGCAATGTCTTTGAG +
Preference number: 4 (lower is better)
Translates to: RKWPHCHQIPSLIEVLPHVLVWN*TCNVFE
Trigger: CTCAAAGACATTGCAGGTTCAGTTCCAGACCAACAC...GTGGGGGAGAACTTCAATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp TACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTGCCTCTCCGATCAATCTCATTGGTaGTGTAAGTCTGGGACTGGA +
Preference number: 4 (lower is better)
Translates to: YQPNSCAGCNLRAGPCLSDQSHW*CKSGTG
Trigger: TCCAGTCCCAGACTTACAGCACCAATGAGATTGATC...GGAGAGGCAAGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTGGCTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp TACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTGCCTCTCCCTGTTGAGAATTGGGTaGTTATTGTACCCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: YQPNSCAGCNLRAGPCLSLLRIG*LLYPEG
Trigger: GCCTTCTGGGTACAATAAGCACCCAATTCTCAACAG...GGAGAGGCAAGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTGGCTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp CGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTGATTGAAGTTCTCCCCCACCCTACCTCCTTAGGTTaGTGTATGGATCCCATGAGA +
Preference number: 4 (lower is better)
Translates to: RKWPHCHQIPSLIEVLPHPTSLG*CMDPMR
Trigger: TCTCATGGGATCCATACAGCAACCTAAGGAGGTAGG...GTGGGGGAGAACTTCAATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp TGGTGCCAGGATGAGCTAGCCAATCCCACGTGTGTGCTGACTGCAGCAGGACACTCGTCTTGTGGTCAGTaGCAGAAAAATGCACATGAA +
Preference number: 4 (lower is better)
Translates to: WCQDELANPTCVLTAAGHSSCGQ*QKNAHE
Trigger: TTCATGTGCATTTTTCTGCCACTGACCACAAGACGA...GTGTCCTGCTGCAGTCAGCACACACGTGGGATTGGCTAGCTCATCCTGGCACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR TCA 90 bp GCTCTTCCTTGTCTTAACCATCCTTTGGGAAGAAGGGCCTGTTTTTCAGGCCGTGTCTGGCCATCTTCCTaGCTCAGCTGCAGATCAATC +
Preference number: 4 (lower is better)
Translates to: ALPCLNHPLGRRACFSGRVWPSS*LSCRSI
Trigger: GATTGATCTGCAGCTGAGTCAGGAAGATGGCCAGAC...ACGGCCTGAAAAACAGGCCCTTCTTCCCAAAGGATGGTTAAGACAAGGAAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR TCA 90 bp TTGAGTGTTTATTGTGTACAAGGAGCTAATCCTCTGCCCTCTGAGGCTTTCAGAGGCAGGAGCATTGCTTaGGCCCTGGAGGTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: LSVYCVQGANPLPSEAFRGRSIA*ALEVEA
Trigger: AGCCTCAACCTCCAGGGCTCAAGCAATGCTCCTGCC...TCTGAAAGCCTCAGAGGGCAGAGGATTAGCTCCTTGTACACAATAAACACTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp TGGTGCCAGGATGAGCTAGCCAATCCCACGTGTGTGCTGACTGCAGCAGGACACAACATTCATGTGACTTaGTTTCTTGTGTTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: WCQDELANPTCVLTAAGHNIHVT*FLVLVW
Trigger: CCAGACCAACACAAGAAAGCAAGTCACATGAATGTT...GTGTCCTGCTGCAGTCAGCACACACGTGGGATTGGCTAGCTCATCCTGGCACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp TGGTGCCAGGATGAGCTAGCCAATCCCACGTGTGTGCTGACTGCAGCAGGACACATTAGACAATGCTATTaGACTCTTGCTGGTCTACAG +
Preference number: 4 (lower is better)
Translates to: WCQDELANPTCVLTAAGHIRQCY*TLAGLQ
Trigger: CTGTAGACCAGCAAGAGTGCAATAGCATTGTCTAAT...GTGTCCTGCTGCAGTCAGCACACACGTGGGATTGGCTAGCTCATCCTGGCACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp ACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGCCCCACTGTCATCAGATTCCTCAGTAGGAGAACGTaGCTGATAAGACTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: TTSKGLVGTGNGPTVIRFLSRRT*LIRLSV
Trigger: CACACTGAGTCTTATCAGCCACGTTCTCCTACTGAG...GAATCTGATGACAGTGGGGCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp CGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTGATTGAAGTTCTCCCCCACCTTGCTTTCTTGTGTTaGTCTGGAACTGAACCTGCA +
Preference number: 4 (lower is better)
Translates to: RKWPHCHQIPSLIEVLPHLAFLC*SGTEPA
Trigger: TGCAGGTTCAGTTCCAGACCAACACAAGAAAGCAAG...GTGGGGGAGAACTTCAATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR TCA 90 bp TTGAGTGTTTATTGTGTACAAGGAGCTAATCCTCTGCCCTCTGAGGCTTTCAGAGGCTGCAGTGAGCCATaGTCATGCCACTCCACTCCA +
Preference number: 4 (lower is better)
Translates to: LSVYCVQGANPLPSEAFRGCSEP*SCHSTP
Trigger: TGGAGTGGAGTGGCATGATCATGGCTCACTGCAGCC...TCTGAAAGCCTCAGAGGGCAGAGGATTAGCTCCTTGTACACAATAAACACTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR TCA 90 bp GCTCTTCCTTGTCTTAACCATCCTTTGGGAAGAAGGGCCTGTTTTTCAGGCCGTAACCTGCAATGTCTTTaGGGTATGCCTCGACCTACC +
Preference number: 4 (lower is better)
Translates to: ALPCLNHPLGRRACFSGRNLQCL*GMPRPT
Trigger: GGTAGGTCGAGGCATACCTCAAAGACATTGCAGGTT...ACGGCCTGAAAAACAGGCCCTTCTTCCCAAAGGATGGTTAAGACAAGGAAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp TTGAGTGTTTATTGTGTACAAGGAGCTAATCCTCTGCCCTCTGAGGCTTTCAGATGCCGCTGCCACTGCTaGAAGAGGAGTTCACTGCGA +
Preference number: 4 (lower is better)
Translates to: LSVYCVQGANPLPSEAFRCRCHC*KRSSLR
Trigger: TCGCAGTGAACTCCTCTTCCAGCAGTGGCAGCGGCA...TCTGAAAGCCTCAGAGGGCAGAGGATTAGCTCCTTGTACACAATAAACACTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp GGAACTGAACCTGCAATGTCTTTGAGGTATGCCTCGACCTACCTCCTTAGGTTGAAGACAGCAATCCTGTaGTTGGAGGGAGGGCATATT +
Preference number: 4 (lower is better)
Translates to: GTEPAMSLRYASTYLLRLKTAIL*LEGGHI
Trigger: AATATGCCCTCCCTCCAAGCACAGGATTGCTGTCTT...CAACCTAAGGAGGTAGGTCGAGGCATACCTCAAAGACATTGCAGGTTCAGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp AGTCCTGAAGGGCACTTCCCAAAGAGCACACTTAGGACCTCAGTAGGAGAACGTCAGGAAATCGTCTTGTaGTCAGTGGCAGAAAAATGC +
Preference number: 4 (lower is better)
Translates to: SPEGHFPKSTLRTSVGERQEIVL*SVAEKC
Trigger: GCATTTTTCTGCCACTGACCACAAGACGATTTCCTG...ACGTTCTCCTACTGAGGTCCTAAGTGTGCTCTTTGGGAAGTGCCCTTCAGGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR CAA 72 bp TTCTTGTGTTGGTCTGGAACTGAACCTGCAATGTCTTaGAGGTATGCCTCGACCTACCTCCTTAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: FLCWSGTEPAMS*RYASTYLLRLL
Trigger: CAGCAACCTAAGGAGGTAGGTCGAGGCATACCTCAAAGACATTGCAGGTTCAGTTCCAGACCAACACAAGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR GCA 90 bp TGGGGTCAAGGGAGGCCAGTCAAAGTCTCCTCCTGGAATGAAGAGCTCAGTGGCTGTTTTATTAGACAATaGTATTGCACTCTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: WGQGRPVKVSSWNEELSGCFIRQ*YCTLAG
Trigger: ACCAGCAAGAGTGCAATAGCATTGTCTAATAAAACA...GCCACTGAGCTCTTCATTCCAGGAGGAGACTTTGACTGGCCTCCCTTGACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp GCTCTTCCTTGTCTTAACCATCCTTTGGGAAGAAGGGCCTGTTTTTCAGGCCGTGCAGATCAATCTCATTaGTGCTGTAAGTCTGGGACT +
Preference number: 4 (lower is better)
Translates to: ALPCLNHPLGRRACFSGRADQSH*CCKSGT
Trigger: AGTCCCAGACTTACAGCACCAATGAGATTGATCTGC...ACGGCCTGAAAAACAGGCCCTTCTTCCCAAAGGATGGTTAAGACAAGGAAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp AGTCCTGAAGGGCACTTCCCAAAGAGCACACTTAGGACCTCAGTAGGAGAACGTGTCTTAACCATCCTTTaGGAAGAAGGGCCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: SPEGHFPKSTLRTSVGERVLTIL*EEGPVF
Trigger: AAAAACAGGCCCTTCTTCCCAAAGGATGGTTAAGAC...ACGTTCTCCTACTGAGGTCCTAAGTGTGCTCTTTGGGAAGTGCCCTTCAGGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR TCA 90 bp TTGAGTGTTTATTGTGTACAAGGAGCTAATCCTCTGCCCTCTGAGGCTTTCAGAGGCTTTCAGAGAGGTTaGGAGACTTGTGCCAGATAC +
Preference number: 4 (lower is better)
Translates to: LSVYCVQGANPLPSEAFRGFQRG*ETCARY
Trigger: GTATCTGGCACAAGTCTCTCAACCTCTCTGAAAGCC...TCTGAAAGCCTCAGAGGGCAGAGGATTAGCTCCTTGTACACAATAAACACTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp GTCAAAGTCTCCTCCTGGAATGAAGAGCTCAGTGGCTCTCTGTTAACTCCACACCTTAGAGTGTCAGATTaGGTCAGAGTCAGGAATTCT +
Preference number: 4 (lower is better)
Translates to: VKVSSWNEELSGSLLTPHLRVSD*VRVRNS
Trigger: AGAATTCCTGACTCTGACCCAATCTGACACTCTAAG...GTGTGGAGTTAACAGAGAGCCACTGAGCTCTTCATTCCAGGAGGAGACTTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR TCA 90 bp TTTCAGGGAGAACTTGTAAAAGGGGAGCCAGTCCCAAGTCCGAAGGTATTATACATACGAACTTGCTGGTaGTTGAATCCCAAAGACAGC +
Preference number: 4 (lower is better)
Translates to: FQGELVKGEPVPSPKVLYIRTCW*LNPKDS
Trigger: GCTGTCTTTGGGATTCAATCACCAGCAAGTTCGTAT...GTATAATACCTTCGGACTTGGGACTGGCTCCCCTTTTACAAGTTCTCCCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR TCA 90 bp GCTCTTCCTTGTCTTAACCATCCTTTGGGAAGAAGGGCCTGTTTTTCAGGCCGTCCAAAAACATTCATGTaGCTTGCTTTCTTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: ALPCLNHPLGRRACFSGRPKTFM*LAFLCW
Trigger: CCAACACAAGAAAGCAAGTCACATGAATGTTTTTGG...ACGGCCTGAAAAACAGGCCCTTCTTCCCAAAGGATGGTTAAGACAAGGAAGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CCA 90 bp GTCAAAGTCTCCTCCTGGAATGAAGAGCTCAGTGGCTCTCTGTTAACTCCACACCGTCAGGCCTTTATGTaGCACTTTCACTTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: VKVSSWNEELSGSLLTPHRQAFM*HFHFSF
Trigger: AAAAGAAAAGTGAAAGTGCCACATAAAGGCCTGACG...GTGTGGAGTTAACAGAGAGCCACTGAGCTCTTCATTCCAGGAGGAGACTTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR CAA 72 bp ATGTCTTTGAGGTATGCCTCGACCTACCTCCTTAGGTaGCTGTATGGATCCCATGAGACAGTAACTTATAGT +
Preference number: 4 (lower is better)
Translates to: MSLRYASTYLLR*LYGSHETVTYS
Trigger: ACTATAAGTTACTGTCTCATGGGATCCATACAGCAACCTAAGGAGGTAGGTCGAGGCATACCTCAAAGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR CAA 72 bp CAGACACAGACTCACACTGGAGTAAATAATACGAACTaGCTGGTGATTGAATCCCAAAGACAGCAATCCTGT +
Preference number: 4 (lower is better)
Translates to: QTQTHTGVNNTN*LVIESQRQQSC
Trigger: ACAGGATTGCTGTCTTTGGGATTCAATCACCAGCAAGTTCGTATTATTTACTCCAGTGTGAGTCTGTGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
3UTR CAA 72 bp TTATATGCATTGGGAAACCAAAAACATTCATGTGACTaGCTTTCTTGTGTTGGTCTGGAACTGAACCTGCAA +
Preference number: 4 (lower is better)
Translates to: LYALGNQKHSCD*LSCVGLELNLQ
Trigger: TTGCAGGTTCAGTTCCAGACCAACACAAGAAAGCAAGTCACATGAATGTTTTTGGTTTCCCAATGCATATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS GCA 90 bp CGGGACTGGGTGTCCTGCACAGCTGCCGGGGCCAGCGGGCGAACGTaGATCCTCAGCAGCTGGGGCAAGAGCCTCAGGAACACCTTGCGG +
Preference number: 5 (lower is better)
Translates to: RDWVSCTAAGASGRT*ILSSWGKSLRNTLR
Trigger: CCGCAAGGTGTTCCTGAGGCTCTTGCCCCAGCTGCTGAGGATGCACGTTCGCCCGCTGGCCCCGGCAGCTGTGCAGGACACCCAGTCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389492.3
ENST00000651502.1
CDS CCA 90 bp TGCACAGCTGCCGGGGCCAGCGGGCGAACGTGCATCCTCAGCAGCTaGGGCAAGAGCCTCAGGAACACCTTGCGGACCCCTCGGGCCATG +
Preference number: 5 (lower is better)
Translates to: CTAAGASGRTCILSS*GKSLRNTLRTPRAM
Trigger: CATGGCCCGAGGGGTCCGCAAGGTGTTCCTGAGGCTCTTGCCCCAGCTGCTGAGGATGCACGTTCGCCCGCTGGCCCCGGCAGCTGTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389492.3
ENST00000651502.1
CDS GCA 90 bp ATCGACCATCCCGAGGAGCCATTCTGTAGCCGGGACTGGGTGTCCTaGACAGCTGCCGGGGCCAGCGGGCGAACGTGCATCCTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: IDHPEEPFCSRDWVS*TAAGASGRTCILSS
Trigger: GCTGCTGAGGATGCACGTTCGCCCGCTGGCCCCGGCAGCTGTGCAGGACACCCAGTCCCGGCTACAGAATGGCTCCTCGGGATGGTCGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389492.3
ENST00000651502.1
CDS GCA 90 bp GGGCTTGCGCTGGATGAGCAGGTAGAACACCACCTTCTGGTGGCCTaGTTCCTGGGCTGGCGCCGCTGGGTCCAGGAGCATCTTGGCTGG +
Preference number: 5 (lower is better)
Translates to: GLALDEQVEHHLLVA*FLGWRRWVQEHLGW
Trigger: CCAGCCAAGATGCTCCTGGACCCAGCGGCGCCAGCCCAGGAAGCAGGCCACCAGAAGGTGGTGTTCTACCTGCTCATCCAGCGCAAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389492.3
ENST00000651502.1
CDS GCA 90 bp CCTTTCTCTAGCTTCTCCAGCGCTGCCGCCACCAGCCCTTGCCGCTaGCACTGCTGGAAGAGGAGTTCACTGCGAGGCAGGCAGAGGGCC +
Preference number: 5 (lower is better)
Translates to: PFSSFSSAAATSPCR*HCWKRSSLRGRQRA
Trigger: GGCCCTCTGCCTGCCTCGCAGTGAACTCCTCTTCCAGCAGTGGCAGCGGCAAGGGCTGGTGGCGGCAGCGCTGGAGAAGCTAGAGAAAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389492.3
ENST00000651502.1
CDS GCA 90 bp ATGGGCACAGAGGCCCAGGGGAGATGGAGCCAGGCCTCTAGGTGCTaGCAGAGCCAAGGCCAGAAGCCTTGCCCAGGCCTTACCCCACCA +
Preference number: 5 (lower is better)
Translates to: MGTEAQGRWSQASRC*QSQGQKPCPGLTPP
Trigger: TGGTGGGGTAAGGCCTGGGCAAGGCTTCTGGCCTTGGCTCTGGCAGCACCTAGAGGCCTGGCTCCATCTCCCCTGGGCCTCTGTGCCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485094.1
CDS GCA 90 bp GAGATGGGCACAGAGGCCCAGGGGAGATGGAGCCAGGCCTCTAGGTaGTGCCAGAGCCAAGGCCAGAAGCCTTGCCCAGGCCTTACCCCA +
Preference number: 5 (lower is better)
Translates to: EMGTEAQGRWSQASR*CQSQGQKPCPGLTP
Trigger: TGGGGTAAGGCCTGGGCAAGGCTTCTGGCCTTGGCTCTGGCAGCACCTAGAGGCCTGGCTCCATCTCCCCTGGGCCTCTGTGCCCATCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485094.1
CDS CCA 90 bp GTAGAACACCACCTTCTGGTGGCCTGCTTCCTGGGCTGGCGCCGCTaGGTCCAGGAGCATCTTGGCTGGTCGGTGCTGGATGGCCCACTC +
Preference number: 5 (lower is better)
Translates to: VEHHLLVACFLGWRR*VQEHLGWSVLDGPL
Trigger: GAGTGGGCCATCCAGCACCGACCAGCCAAGATGCTCCTGGACCCAGCGGCGCCAGCCCAGGAAGCAGGCCACCAGAAGGTGGTGTTCTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389492.3
ENST00000651502.1
CDS CCA 90 bp CCAGTTGTGATCGACCATCCCGAGGAGCCATTCTGTAGCCGGGACTaGGTGTCCTGCACAGCTGCCGGGGCCAGCGGGCGAACGTGCATC +
Preference number: 5 (lower is better)
Translates to: PVVIDHPEEPFCSRD*VSCTAAGASGRTCI
Trigger: GATGCACGTTCGCCCGCTGGCCCCGGCAGCTGTGCAGGACACCCAGTCCCGGCTACAGAATGGCTCCTCGGGATGGTCGATCACAACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389492.3
ENST00000651502.1
CDS CCA 90 bp GATGAGCAGGTAGAACACCACCTTCTGGTGGCCTGCTTCCTGGGCTaGCGCCGCTGGGTCCAGGAGCATCTTGGCTGGTCGGTGCTGGAT +
Preference number: 5 (lower is better)
Translates to: DEQVEHHLLVACFLG*RRWVQEHLGWSVLD
Trigger: ATCCAGCACCGACCAGCCAAGATGCTCCTGGACCCAGCGGCGCCAGCCCAGGAAGCAGGCCACCAGAAGGTGGTGTTCTACCTGCTCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389492.3
ENST00000651502.1
CDS-3UTR CAA 90 bp GTGACTTGCCCAAGGGTGTCCCCTGGTTACCAGCCAAACTCGTGTGCCGGCTGTCCCCACAGTGGTTGGTaGGCTCAGTCTGGTGAGGGC +
Preference number: 5 (lower is better)
Translates to: VTCPRVSPGYQPNSCAGCPHSGW*AQSGEG
Trigger: GCCCTCACCAGACTGAGCCAACCAACCACTGTGGGG...ACAGCCGGCACACGAGTTTGGCTGGTAACCAGGGGACACCCTTGGGCAAGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CAA 90 bp TGGGGTCAAGGGAGGCCAGTCAAAGTCTCCTCCTGGAATGAAGAGCTCAGTGGCCCGGGTGTCCCCATGTaGCCCAGGCTGGGTTCCTGG +
Preference number: 5 (lower is better)
Translates to: WGQGRPVKVSSWNEELSGPGVPM*PRLGSW
Trigger: CCAGGAACCCAGCCTGGGCAACATGGGGACACCCGG...GCCACTGAGCTCTTCATTCCAGGAGGAGACTTTGACTGGCCTCCCTTGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS CCA 90 bp CTTAGCAGGGAGAGCTTGGGCACCTTCAGGTGTCTTAGCCTGAGATaGGCACAGAGGCCCAGGGGAGATGGAGCCAGGCCTCTAGGTGCT +
Preference number: 5 (lower is better)
Translates to: LSRESLGTFRCLSLR*AQRPRGDGARPLGA
Trigger: AGCACCTAGAGGCCTGGCTCCATCTCCCCTGGGCCTCTGTGCCCATCTCAGGCTAAGACACCTGAAGGTGCCCAAGCTCTCCCTGCTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485094.1
CDS TCA 90 bp TCTTGGCCACAAGGAAGAGGAAGACAGTCTGGGCCAGGAGCACGTTaGTGGCGACGGTACACTTCTGGCCCCCAGCCTTGGCAGGAAGGA +
Preference number: 5 (lower is better)
Translates to: SWPQGRGRQSGPGAR*WRRYTSGPQPWQEG
Trigger: TCCTTCCTGCCAAGGCTGGGGGCCAGAAGTGTACCGTCGCCATCAACGTGCTCCTGGCCCAGACTGTCTTCCTCTTCCTTGTGGCCAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389492.3
ENST00000651502.1
CDS CCA 90 bp GAGGTTTCAGGCACCTTCTTGGCCACAAGGAAGAGGAAGACAGTCTaGGCCAGGAGCACGTTGATGGCGACGGTACACTTCTGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: EVSGTFLATRKRKTV*ARSTLMATVHFWPP
Trigger: TGGGGGCCAGAAGTGTACCGTCGCCATCAACGTGCTCCTGGCCCAGACTGTCTTCCTCTTCCTTGTGGCCAAGAAGGTGCCTGAAACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389492.3
ENST00000651502.1
CDS CCA 90 bp CCTCAGGAACACCTTGCGGACCCCTCGGGCCATGGAGTGTGTGTGTaGAGACCGCAAGGAGACATTGAGCACAACCACAGCATTCACGAC +
Preference number: 5 (lower is better)
Translates to: PQEHLADPSGHGVCV*RPQGDIEHNHSIHD
Trigger: GTCGTGAATGCTGTGGTTGTGCTCAATGTCTCCTTGCGGTCTCCACACACACACTCCATGGCCCGAGGGGTCCGCAAGGTGTTCCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389492.3
ENST00000651502.1
CDS-3UTR CAA 90 bp TACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTGCCTCTCCTTCTGGCCCCCAGCCTaGGCAGGAAGGAAGTGGATG +
Preference number: 5 (lower is better)
Translates to: YQPNSCAGCNLRAGPCLSFWPPA*AGRKWM
Trigger: CATCCACTTCCTTCCTGCCAAGGCTGGGGGCCAGAA...GGAGAGGCAAGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTGGCTGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CAA 90 bp CTGCTTTGGAGAGAGCATCGGCTGCTACTCTTCACACCTCTTGTGACTGCCCTCGGCTGCTGCCCTGCTTaGGAGAGAGCATCGGCTGCT +
Preference number: 5 (lower is better)
Translates to: LLWREHRLLLFTPLVTALGCCPA*ERASAA
Trigger: AGCAGCCGATGCTCTCTCCAAAGCAGGGCAGCAGCC...GAGGGCAGTCACAAGAGGTGTGAAGAGTAGCAGCCGATGCTCTCTCCAAAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CAA 90 bp ACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGCCCCACTGTCATCAGATTCGCACAGGCAATGAGGTaGCAGGCTTCCACACAGGCC +
Preference number: 5 (lower is better)
Translates to: TTSKGLVGTGNGPTVIRFAQAMR*QASTQA
Trigger: GGCCTGTGTGGAAGCCTGCAACCTCATTGCCTGTGC...GAATCTGATGACAGTGGGGCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CAA 90 bp TACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTGCCTCTCCTTCAGGGAGATGAGGTaGGTGAGGGTTAGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: YQPNSCAGCNLRAGPCLSFREMR*VRVSFR
Trigger: CCTGAAGCTAACCCTCACCAACCTCATCTCCCTGAA...GGAGAGGCAAGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTGGCTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CAA 90 bp GCTCTTCCTTGTCTTAACCATCCTTTGGGAAGAAGGGCCTGTTTTTCAGGCCGTGGGTCCAGGAGCATCTaGGCTGGTCGGTGCTGGATG +
Preference number: 5 (lower is better)
Translates to: ALPCLNHPLGRRACFSGRGSRSI*AGRCWM
Trigger: CATCCAGCACCGACCAGCCAAGATGCTCCTGGACCC...ACGGCCTGAAAAACAGGCCCTTCTTCCCAAAGGATGGTTAAGACAAGGAAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CAA 90 bp ACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGCCCCACTGTCATCAGATTCAGGAAGGTCAGGTACTaGCTGATGAGTGGCACCGCC +
Preference number: 5 (lower is better)
Translates to: TTSKGLVGTGNGPTVIRFRKVRY*LMSGTA
Trigger: GGCGGTGCCACTCATCAGCAAGTACCTGACCTTCCT...GAATCTGATGACAGTGGGGCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CAA 90 bp CCCCTGGTTACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTACAGCAATCCTGTGCTaGGAGGGAGGGCATATTTCC +
Preference number: 5 (lower is better)
Translates to: PLVTSQTRVPAVISEQDLTAILC*EGGHIS
Trigger: GGAAATATGCCCTCCCTCCAAGCACAGGATTGCTGT...AAGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTGGCTGGTAACCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CAA 90 bp ACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGCCCCACTGTCATCAGATTCGTTGGGGTCGTAGTTTaGCATCAGGTCTGCGAGCAG +
Preference number: 5 (lower is better)
Translates to: TTSKGLVGTGNGPTVIRFVGVVV*HQVCEQ
Trigger: CTGCTCGCAGACCTGATGCAAAACTACGACCCCAAC...GAATCTGATGACAGTGGGGCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CAA 90 bp GTCAAAGTCTCCTCCTGGAATGAAGAGCTCAGTGGCTCTCTGTTAACTCCACACTGGGCCAGGAGCACGTaGATGGCGACGGTACACTTC +
Preference number: 5 (lower is better)
Translates to: VKVSSWNEELSGSLLTPHWARST*MATVHF
Trigger: GAAGTGTACCGTCGCCATCAACGTGCTCCTGGCCCA...GTGTGGAGTTAACAGAGAGCCACTGAGCTCTTCATTCCAGGAGGAGACTTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CAA 90 bp CTGCTTTGGAGAGAGCATCGGCTGCTACTCTTCACACCTCTTGTGACTGCCCTCGTTTCAGGCACCTTCTaGGCCACAAGGAAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: LLWREHRLLLFTPLVTALVSGTF*ATRKRK
Trigger: CTTCCTCTTCCTTGTGGCCAAGAAGGTGCCTGAAAC...GAGGGCAGTCACAAGAGGTGTGAAGAGTAGCAGCCGATGCTCTCTCCAAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CAA 90 bp TTTCAGGGAGAACTTGTAAAAGGGGAGCCAGTCCCAAGTCCGAAGGTATTATACAGCCTCAGGAACACCTaGCGGACCCCTCGGGCCATG +
Preference number: 5 (lower is better)
Translates to: FQGELVKGEPVPSPKVLYSLRNT*RTPRAM
Trigger: CATGGCCCGAGGGGTCCGCAAGGTGTTCCTGAGGCT...GTATAATACCTTCGGACTTGGGACTGGCTCCCCTTTTACAAGTTCTCCCTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CAA 90 bp CTGCTTTGGAGAGAGCATCGGCTGCTACTCTTCACACCTCTTGTGACTGCCCTCAAGACACCGTCCACGTaGTTCTCCAGCACGATATCC +
Preference number: 5 (lower is better)
Translates to: LLWREHRLLLFTPLVTALKTPST*FSSTIS
Trigger: GGATATCGTGCTGGAGAACAACGTGGACGGTGTCTT...GAGGGCAGTCACAAGAGGTGTGAAGAGTAGCAGCCGATGCTCTCTCCAAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CAA 90 bp TGGGGTCAAGGGAGGCCAGTCAAAGTCTCCTCCTGGAATGAAGAGCTCAGTGGCTTTTCTCAGGGCTGTTaGGCTCACACAGTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: WGQGRPVKVSSWNEELSGFSQGC*AHTVLK
Trigger: CTTCAGGACTGTGTGAGCCAAACAGCCCTGAGAAAA...GCCACTGAGCTCTTCATTCCAGGAGGAGACTTTGACTGGCCTCCCTTGACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CAA 90 bp CGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTGATTGAAGTTCTCCCCCACATCTCTATCCAGACATaGGTGGTGAGGGCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: RKWPHCHQIPSLIEVLPHISIQT*VVRASS
Trigger: AGAGGAAGCCCTCACCACCAATGTCTGGATAGAGAT...GTGGGGGAGAACTTCAATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CAA 90 bp ACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGCCCCACTGTCATCAGATTCAGGCCACTGGGGCTGTaGAGAATTGGGTGCTTATTG +
Preference number: 5 (lower is better)
Translates to: TTSKGLVGTGNGPTVIRFRPLGL*RIGCLL
Trigger: CAATAAGCACCCAATTCTCAACAGCCCCAGTGGCCT...GAATCTGATGACAGTGGGGCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CAA 90 bp CGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTGATTGAAGTTCTCCCCCACACCTACCTCCTTAGGTaGCTGTATGGATCCCATGAG +
Preference number: 5 (lower is better)
Translates to: RKWPHCHQIPSLIEVLPHTYLLR*LYGSHE
Trigger: CTCATGGGATCCATACAGCAACCTAAGGAGGTAGGT...GTGGGGGAGAACTTCAATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CAA 90 bp GTGACTTGCCCAAGGGTGTCCCCTGGTTACCAGCCAAACTCGTGTGCCGGCTGTAATGCTATTGCACTCTaGCTGGTCTACAGTATAGTG +
Preference number: 5 (lower is better)
Translates to: VTCPRVSPGYQPNSCAGCNAIAL*LVYSIV
Trigger: CACTATACTGTAGACCAGCAAGAGTGCAATAGCATT...ACAGCCGGCACACGAGTTTGGCTGGTAACCAGGGGACACCCTTGGGCAAGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CAA 90 bp AGTCCTGAAGGGCACTTCCCAAAGAGCACACTTAGGACCTCAGTAGGAGAACGTAGAATTGGGTGCTTATaGTACCCAGAAGGCACGGGG +
Preference number: 5 (lower is better)
Translates to: SPEGHFPKSTLRTSVGERRIGCL*YPEGTG
Trigger: CCCCGTGCCTTCTGGGTACAATAAGCACCCAATTCT...ACGTTCTCCTACTGAGGTCCTAAGTGTGCTCTTTGGGAAGTGCCCTTCAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CAA 90 bp GCTCTTCCTTGTCTTAACCATCCTTTGGGAAGAAGGGCCTGTTTTTCAGGCCGTAGCTTCAGGCTGACATaGACCACATCCGAGTCTCGT +
Preference number: 5 (lower is better)
Translates to: ALPCLNHPLGRRACFSGRSFRLT*TTSESR
Trigger: ACGAGACTCGGATGTGGTCAATGTCAGCCTGAAGCT...ACGGCCTGAAAAACAGGCCCTTCTTCCCAAAGGATGGTTAAGACAAGGAAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CAA 90 bp TACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTGCCTCTCCAAACATTCATGTGACTaGCTTTCTTGTGTTGGTCTG +
Preference number: 5 (lower is better)
Translates to: YQPNSCAGCNLRAGPCLSKHSCD*LSCVGL
Trigger: CAGACCAACACAAGAAAGCAAGTCACATGAATGTTT...GGAGAGGCAAGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTGGCTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CAA 90 bp TTTCAGGGAGAACTTGTAAAAGGGGAGCCAGTCCCAAGTCCGAAGGTATTATACACTCCACACCTCCTCTaGCCTAGCTCTTCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: FQGELVKGEPVPSPKVLYTPHLL*PSSSLS
Trigger: AGACAAGGAAGAGCTAGGCAAGAGGAGGTGTGGAGT...GTATAATACCTTCGGACTTGGGACTGGCTCCCCTTTTACAAGTTCTCCCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CAA 90 bp CCCCTGGTTACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTGTAAATAATACGAACTaGCTGGTGATTGAATCCCAA +
Preference number: 5 (lower is better)
Translates to: PLVTSQTRVPAVISEQDLVNNTN*LVIESQ
Trigger: TTGGGATTCAATCACCAGCAAGTTCGTATTATTTAC...AAGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTGGCTGGTAACCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS-3UTR CAA 90 bp GCTCTTCCTTGTCTTAACCATCCTTTGGGAAGAAGGGCCTGTTTTTCAGGCCGTTGTCTTAACCATCCTTaGGGAAGAAGGGCCTGTTTT +
Preference number: 5 (lower is better)
Translates to: ALPCLNHPLGRRACFSGRCLNHP*GRRACF
Trigger: AAAACAGGCCCTTCTTCCCAAAGGATGGTTAAGACA...ACGGCCTGAAAAACAGGCCCTTCTTCCCAAAGGATGGTTAAGACAAGGAAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS GCA 72 bp CCCGAGGAGCCATTCTGTAGCCGGGACTGGGTGTCCTaGACAGCTGCCGGGGCCAGCGGGCGAACGTGCATC +
Preference number: 6 (lower is better)
Translates to: PEEPFCSRDWVS*TAAGASGRTCI
Trigger: GATGCACGTTCGCCCGCTGGCCCCGGCAGCTGTGCAGGACACCCAGTCCCGGCTACAGAATGGCTCCTCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389492.3
ENST00000651502.1
CDS CCA 72 bp GCCGGGGCCAGCGGGCGAACGTGCATCCTCAGCAGCTaGGGCAAGAGCCTCAGGAACACCTTGCGGACCCCT +
Preference number: 6 (lower is better)
Translates to: AGASGRTCILSS*GKSLRNTLRTP
Trigger: AGGGGTCCGCAAGGTGTTCCTGAGGCTCTTGCCCCAGCTGCTGAGGATGCACGTTCGCCCGCTGGCCCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389492.3
ENST00000651502.1
CDS GCA 72 bp GGGCCGCAGGTTGGGGTCGTAGTTTTGCATCAGGTCTaGGAGCAGGCGCTCCTCCTGGTTCCGGCCCTGGGC +
Preference number: 6 (lower is better)
Translates to: GPQVGVVVLHQV*EQALLLVPALG
Trigger: GCCCAGGGCCGGAACCAGGAGGAGCGCCTGCTCGCAGACCTGATGCAAAACTACGACCCCAACCTGCGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389492.3
ENST00000485094.1
ENST00000651502.1
CDS GCA 72 bp GTGTCCTGCACAGCTGCCGGGGCCAGCGGGCGAACGTaGATCCTCAGCAGCTGGGGCAAGAGCCTCAGGAAC +
Preference number: 6 (lower is better)
Translates to: VSCTAAGASGRT*ILSSWGKSLRN
Trigger: GTTCCTGAGGCTCTTGCCCCAGCTGCTGAGGATGCACGTTCGCCCGCTGGCCCCGGCAGCTGTGCAGGACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389492.3
ENST00000651502.1
CDS GCA 72 bp TCCAGCGCTGCCGCCACCAGCCCTTGCCGCTGCCACTaGTGGAAGAGGAGTTCACTGCGAGGCAGGCAGAGG +
Preference number: 6 (lower is better)
Translates to: SSAAATSPCRCH*WKRSSLRGRQR
Trigger: CCTCTGCCTGCCTCGCAGTGAACTCCTCTTCCAGCAGTGGCAGCGGCAAGGGCTGGTGGCGGCAGCGCTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389492.3
ENST00000651502.1
CDS CCA 72 bp ATCGACCATCCCGAGGAGCCATTCTGTAGCCGGGACTaGGTGTCCTGCACAGCTGCCGGGGCCAGCGGGCGA +
Preference number: 6 (lower is better)
Translates to: IDHPEEPFCSRD*VSCTAAGASGR
Trigger: TCGCCCGCTGGCCCCGGCAGCTGTGCAGGACACCCAGTCCCGGCTACAGAATGGCTCCTCGGGATGGTCGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389492.3
ENST00000651502.1
CDS GCA 72 bp AGCTTCTCCAGCGCTGCCGCCACCAGCCCTTGCCGCTaGCACTGCTGGAAGAGGAGTTCACTGCGAGGCAGG +
Preference number: 6 (lower is better)
Translates to: SFSSAAATSPCR*HCWKRSSLRGR
Trigger: CCTGCCTCGCAGTGAACTCCTCTTCCAGCAGTGGCAGCGGCAAGGGCTGGTGGCGGCAGCGCTGGAGAAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389492.3
ENST00000651502.1
CDS GCA 72 bp GAGGCCCAGGGGAGATGGAGCCAGGCCTCTAGGTGCTaGCAGAGCCAAGGCCAGAAGCCTTGCCCAGGCCTT +
Preference number: 6 (lower is better)
Translates to: EAQGRWSQASRC*QSQGQKPCPGL
Trigger: AAGGCCTGGGCAAGGCTTCTGGCCTTGGCTCTGGCAGCACCTAGAGGCCTGGCTCCATCTCCCCTGGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485094.1
CDS CCA 72 bp CTGGGCTGGCGCCGCTGGGTCCAGGAGCATCTTGGCTaGTCGGTGCTGGATGGCCCACTCCCCATTCTCTGT +
Preference number: 6 (lower is better)
Translates to: LGWRRWVQEHLG*SVLDGPLPILC
Trigger: ACAGAGAATGGGGAGTGGGCCATCCAGCACCGACCAGCCAAGATGCTCCTGGACCCAGCGGCGCCAGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389492.3
ENST00000651502.1
CDS CCA 72 bp CTTCCTGGGCTGGCGCCGCTGGGTCCAGGAGCATCTTaGCTGGTCGGTGCTGGATGGCCCACTCCCCATTCT +
Preference number: 6 (lower is better)
Translates to: LPGLAPLGPGAS*LVGAGWPTPHS
Trigger: AGAATGGGGAGTGGGCCATCCAGCACCGACCAGCCAAGATGCTCCTGGACCCAGCGGCGCCAGCCCAGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389492.3
ENST00000651502.1
CDS CAA 90 bp CACATCCGAGTCTCGTTCCGCGGGCCGCAGGTTGGGGTCGTAGTTTaGCATCAGGTCTGCGAGCAGGCGCTCCTCCTGGTTCCGGCCCTG +
Preference number: 6 (lower is better)
Translates to: HIRVSFRGPQVGVVV*HQVCEQALLLVPAL
Trigger: CAGGGCCGGAACCAGGAGGAGCGCCTGCTCGCAGACCTGATGCAAAACTACGACCCCAACCTGCGGCCCGCGGAACGAGACTCGGATGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389492.3
ENST00000485094.1
ENST00000651502.1
CDS TCA 72 bp TGCGAGGCAGGCAGAGGGCCACCTCCTCCCCAGTTGTaGTCGACCATCCCGAGGAGCCATTCTGTAGCCGGG +
Preference number: 6 (lower is better)
Translates to: CEAGRGPPPPQL*STIPRSHSVAG
Trigger: CCCGGCTACAGAATGGCTCCTCGGGATGGTCGATCACAACTGGGGAGGAGGTGGCCCTCTGCCTGCCTCGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389492.3
ENST00000651502.1
CDS CCA 72 bp GTAGAACACCACCTTCTGGTGGCCTGCTTCCTGGGCTaGCGCCGCTGGGTCCAGGAGCATCTTGGCTGGTCG +
Preference number: 6 (lower is better)
Translates to: VEHHLLVACFLG*RRWVQEHLGWS
Trigger: CGACCAGCCAAGATGCTCCTGGACCCAGCGGCGCCAGCCCAGGAAGCAGGCCACCAGAAGGTGGTGTTCTAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389492.3
ENST00000651502.1
CDS GCA 72 bp CTGGATGAGCAGGTAGAACACCACCTTCTGGTGGCCTaGTTCCTGGGCTGGCGCCGCTGGGTCCAGGAGCAT +
Preference number: 6 (lower is better)
Translates to: LDEQVEHHLLVA*FLGWRRWVQEH
Trigger: ATGCTCCTGGACCCAGCGGCGCCAGCCCAGGAAGCAGGCCACCAGAAGGTGGTGTTCTACCTGCTCATCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389492.3
ENST00000651502.1
CDS CCA 72 bp CACCTTGCGGACCCCTCGGGCCATGGAGTGTGTGTGTaGAGACCGCAAGGAGACATTGAGCACAACCACAGC +
Preference number: 6 (lower is better)
Translates to: HLADPSGHGVCV*RPQGDIEHNHS
Trigger: GCTGTGGTTGTGCTCAATGTCTCCTTGCGGTCTCCACACACACACTCCATGGCCCGAGGGGTCCGCAAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389492.3
ENST00000651502.1
CDS CCA 72 bp AATGAGGTTGCAGGCTTCCACACAGGCCTGGATGGCTaGGGCAGCCTGCTTCAGGCTGCCACAGAACTGGCT +
Preference number: 6 (lower is better)
Translates to: NEVAGFHTGLDG*GSLLQAATELA
Trigger: AGCCAGTTCTGTGGCAGCCTGAAGCAGGCTGCCCCAGCCATCCAGGCCTGTGTGGAAGCCTGCAACCTCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389492.3
ENST00000651502.1
CDS CCA 72 bp ACGTGTGTGACTCCCACATGCCCCACAGTGGTTGGTTaGCTCAGTCTGGTGAGGGCAGGTAGGGGCGTGGAT +
Preference number: 6 (lower is better)
Translates to: TCVTPTCPTVVG*LSLVRAGRGVD
Trigger: ATCCACGCCCCTACCTGCCCTCACCAGACTGAGCCAACCAACCACTGTGGGGCATGTGGGAGTCACACACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651502.1
CDS CAA 90 bp TCGTTCAGGGAGATGAGGTTGGTGAGGGTTAGCTTCAGGCTGACATaGACCACATCCGAGTCTCGTTCCGCGGGCCGCAGGTTGGGGTCG +
Preference number: 6 (lower is better)
Translates to: SFREMRLVRVSFRLT*TTSESRSAGRRLGS
Trigger: CGACCCCAACCTGCGGCCCGCGGAACGAGACTCGGATGTGGTCAATGTCAGCCTGAAGCTAACCCTCACCAACCTCATCTCCCTGAACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389492.3
ENST00000485094.1
ENST00000651502.1
CDS CAA 90 bp GGGCCTGGAGTGTGCAGTGGTTTCGTGTGTGCGCAGACACGCATCTaGTGTGCATGTGTGCCTTCTCACCCACGCACCCCAGGCGTGAAT +
Preference number: 6 (lower is better)
Translates to: GPGVCSGFVCAQTRI*CACVPSHPRTPGVN
Trigger: ATTCACGCCTGGGGTGCGTGGGTGAGAAGGCACACATGCACACAAGATGCGTGTCTGCGCACACACGAAACCACTGCACACTCCAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485094.1
CDS TCA 72 bp TGTCAAAGTGACTCTGCTGGTGCCGGGCACAGGCAATaGGGTTGCAGGCTTCCACACAGGCCTGGATGGCTG +
Preference number: 6 (lower is better)
Translates to: CQSDSAGAGHRQ*GCRLPHRPGWL
Trigger: CAGCCATCCAGGCCTGTGTGGAAGCCTGCAACCTCATTGCCTGTGCCCGGCACCAGCAGAGTCACTTTGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389492.3
ENST00000651502.1
CDS TCA 72 bp GTGCATGTGTGCCTTCTCACCCACGCACCCCAGGCGTaGATGTCTCCCCTTGGAGCACAGGTGAGGAAACTG +
Preference number: 6 (lower is better)
Translates to: VHVCLLTHAPQA*MSPLGAQVRKL
Trigger: CAGTTTCCTCACCTGTGCTCCAAGGGGAGACATTCACGCCTGGGGTGCGTGGGTGAGAAGGCACACATGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485094.1
CDS GCA 72 bp GCCAGTAGATACAGCCGTCAGGGGACACGAGCACATTaGAGTAGAGGGCCACCTCGAAGACACCGTCCACGT +
Preference number: 6 (lower is better)
Translates to: ASRYSRQGTRAH*SRGPPRRHRPR
Trigger: ACGTGGACGGTGTCTTCGAGGTGGCCCTCTACTGCAATGTGCTCGTGTCCCCTGACGGCTGTATCTACTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485094.1
ENST00000651502.1
CDS GCA 72 bp CAGTGGTTTCGTGTGTGCGCAGACACGCATCTTGTGTaGATGTGTGCCTTCTCACCCACGCACCCCAGGCGT +
Preference number: 6 (lower is better)
Translates to: QWFRVCADTHLV*MCAFSPTHPRR
Trigger: ACGCCTGGGGTGCGTGGGTGAGAAGGCACACATGCACACAAGATGCGTGTCTGCGCACACACGAAACCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485094.1
CDS CAA 72 bp GAGATGAGGTTGGTGAGGGTTAGCTTCAGGCTGACATaGACCACATCCGAGTCTCGTTCCGCGGGCCGCAGG +
Preference number: 6 (lower is better)
Translates to: EMRLVRVSFRLT*TTSESRSAGRR
Trigger: CCTGCGGCCCGCGGAACGAGACTCGGATGTGGTCAATGTCAGCCTGAAGCTAACCCTCACCAACCTCATCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389492.3
ENST00000485094.1
ENST00000651502.1
CDS CAA 72 bp ATGAGTGGCACCGCCTGGGAGGTTTCAGGCACCTTCTaGGCCACAAGGAAGAGGAAGACAGTCTGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: MSGTAWEVSGTF*ATRKRKTVWAR
Trigger: CCTGGCCCAGACTGTCTTCCTCTTCCTTGTGGCCAAGAAGGTGCCTGAAACCTCCCAGGCGGTGCCACTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389492.3
ENST00000651502.1
CDS CAA 90 bp ACCCCTCGGGCCATGGAGTGTGTGTGTGGAGACCGCAAGGAGACATaGAGCACAACCACAGCATTCACGACAATGAGGATGGTCACCACC +
Preference number: 6 (lower is better)
Translates to: TPRAMECVCGDRKET*STTTAFTTMRMVTT
Trigger: GGTGGTGACCATCCTCATTGTCGTGAATGCTGTGGTTGTGCTCAATGTCTCCTTGCGGTCTCCACACACACACTCCATGGCCCGAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389492.3
ENST00000651502.1
CDS CCA 72 bp GGCCATCTTCCTGACTCAGCTGCAGATCAATCTCATTaGTGCTGTAAGTCTGGGACTTGTTCTCCAGCACGA +
Preference number: 6 (lower is better)
Translates to: GHLPDSAADQSH*CCKSGTCSPAR
Trigger: TCGTGCTGGAGAACAAGTCCCAGACTTACAGCACCAATGAGATTGATCTGCAGCTGAGTCAGGAAGATGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389492.3
CDS CCA 72 bp CCTCTGAGAGCAGCTCTCTTAATCCTCCCCAATAAATaGCCTCACTGGAAGATAAGGGAGCAGTTCTGCCAG +
Preference number: 6 (lower is better)
Translates to: PLRAALLILPNK*PHWKIREQFCQ
Trigger: CTGGCAGAACTGCTCCCTTATCTTCCAGTGAGGCCATTTATTGGGGAGGATTAAGAGAGCTGCTCTCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485094.1
CDS GCA 72 bp CATCTTCCTGACTCAGCTGCAGATCAATCTCATTGGTaGTGTAAGTCTGGGACTTGTTCTCCAGCACGATAT +
Preference number: 6 (lower is better)
Translates to: HLPDSAADQSHW*CKSGTCSPARY
Trigger: ATATCGTGCTGGAGAACAAGTCCCAGACTTACAGCACCAATGAGATTGATCTGCAGCTGAGTCAGGAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389492.3