Pregenerated sensors for CHRNB3 (Homo sapiens)
Ensembl gene IDs: ENSG00000147432Ensembl transcript IDs: ENST00000289957.3, ENST00000531610.5, ENST00000534391.1
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGTTTGCAGCTCAGACAAAACCACCAAGGAGGCCAGTGCAGGGTaGGAGATCCAGGCTCTGCCCACACAGATAGCTCGACACCGAGAC | + |
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Preference number: 1 (lower is better) Translates to: PVCSSDKTTKEASAG*EIQALPTQIARHRD Trigger: GTCTCGGTGTCGAGCTATCTGTGTGGGCAGAGCCTGGATCTCCCACCCTGCACTGGCCTCCTTGGTGGTTTTGTCTGAGCTGCAAACTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| 3UTR TCA 90 bp | GCTTTTTGTGCACTCTGGCCACATGTGAGCTCAAGCCTGGACCTATaGTCCCTCCCTGAATGTCTGGGAAAGCCAAGGCAGGGGTCTGAG | + |
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Preference number: 1 (lower is better) Translates to: AFCALWPHVSSSLDL*SLPECLGKPRQGSE Trigger: CTCAGACCCCTGCCTTGGCTTTCCCAGACATTCAGGGAGGGATCATAGGTCCAGGCTTGAGCTCACATGTGGCCAGAGTGCACAAAAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| 3UTR GCA 90 bp | AGATTTGCCTGGCCCATTGCTAACAAGCATAACACGGCCCCAGTTTaGAGCTCAGACAAAACCACCAAGGAGGCCAGTGCAGGGTGGGAG | + |
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Preference number: 1 (lower is better) Translates to: RFAWPIANKHNTAPV*SSDKTTKEASAGWE Trigger: CTCCCACCCTGCACTGGCCTCCTTGGTGGTTTTGTCTGAGCTGCAAACTGGGGCCGTGTTATGCTTGTTAGCAATGGGCCAGGCAAATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| 3UTR GCA 90 bp | CTGCTTCTAGGAGGTGTTCCTCCACCAAGTAGCAACAGCTTTTTGTaGACTCTGGCCACATGTGAGCTCAAGCCTGGACCTATGATCCCT | + |
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Preference number: 1 (lower is better) Translates to: LLLGGVPPPSSNSFL*TLATCELKPGPMIP Trigger: AGGGATCATAGGTCCAGGCTTGAGCTCACATGTGGCCAGAGTGCACAAAAAGCTGTTGCTACTTGGTGGAGGAACACCTCCTAGAAGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| 3UTR CCA 90 bp | AGCTATCCTGCCAGTGTAATCCCCAAACCCTTGTTGAGATTTGCCTaGCCCATTGCTAACAAGCATAACACGGCCCCAGTTTGCAGCTCA | + |
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Preference number: 1 (lower is better) Translates to: SYPASVIPKPLLRFA*PIANKHNTAPVCSS Trigger: TGAGCTGCAAACTGGGGCCGTGTTATGCTTGTTAGCAATGGGCCAGGCAAATCTCAACAAGGGTTTGGGGATTACACTGGCAGGATAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| 3UTR GCA 90 bp | GGTAGGCCAGGCAACTTGGAATCTGTGTTATTGTTAAGTGTGCAGTaGCAGCTATCCTGCCAGTGTAATCCCCAAACCCTTGTTGAGATT | + |
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Preference number: 1 (lower is better) Translates to: GRPGNLESVLLLSVQ*QLSCQCNPQTLVEI Trigger: AATCTCAACAAGGGTTTGGGGATTACACTGGCAGGATAGCTGGCACTGCACACTTAACAATAACACAGATTCCAAGTTGCCTGGCCTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| 3UTR GCA 90 bp | AACTTGGAATCTGTGTTATTGTTAAGTGTGCAGTGCCAGCTATCCTaGCAGTGTAATCCCCAAACCCTTGTTGAGATTTGCCTGGCCCAT | + |
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Preference number: 1 (lower is better) Translates to: NLESVLLLSVQCQLS*QCNPQTLVEICLAH Trigger: ATGGGCCAGGCAAATCTCAACAAGGGTTTGGGGATTACACTGGCAGGATAGCTGGCACTGCACACTTAACAATAACACAGATTCCAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| 3UTR CAA 90 bp | GTGTGCAGTGCCAGCTATCCTGCCAGTGTAATCCCCAAACCCTTGTaGAGATTTGCCTGGCCCATTGCTAACAAGCATAACACGGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: VCSASYPASVIPKPL*RFAWPIANKHNTAP Trigger: TGGGGCCGTGTTATGCTTGTTAGCAATGGGCCAGGCAAATCTCAACAAGGGTTTGGGGATTACACTGGCAGGATAGCTGGCACTGCACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| 3UTR CAA 90 bp | CTGCTGCTTCTAGGAGGTGTTCCTCCACCAAGTAGCAACAGCTTTTaGTGCACTCTGGCCACATGTGAGCTCAAGCCTGGACCTATGATC | + |
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Preference number: 2 (lower is better) Translates to: LLLLGGVPPPSSNSF*CTLATCELKPGPMI Trigger: GATCATAGGTCCAGGCTTGAGCTCACATGTGGCCAGAGTGCACAAAAAGCTGTTGCTACTTGGTGGAGGAACACCTCCTAGAAGCAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| 3UTR-3UTR TCA 90 bp | GTGTGCAGTGCCAGCTATCCTGCCAGTGTAATCCCCAAACCCTTGTTGAGATTTCCTATGATCCCTCCCTaGATGTCTGGGAAAGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: VCSASYPASVIPKPLLRFPMIPP*MSGKAK Trigger: CTTGGCTTTCCCAGACATTCAGGGAGGGATCATAGG...AAATCTCAACAAGGGTTTGGGGATTACACTGGCAGGATAGCTGGCACTGCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| 3UTR-3UTR TCA 90 bp | ACCATGAATAACACCTGCTTCGGTAGGCCAGGCAACTTGGAATCTGTGTTATTGTCAAGCCTGGACCTATaGTCCCTCCCTGAATGTCTG | + |
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Preference number: 2 (lower is better) Translates to: TMNNTCFGRPGNLESVLLSSLDL*SLPECL Trigger: CAGACATTCAGGGAGGGATCATAGGTCCAGGCTTGA...CAATAACACAGATTCCAAGTTGCCTGGCCTACCGAAGCAGGTGTTATTCATGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| 3UTR CAA 90 bp | AATAACACCTGCTTCGGTAGGCCAGGCAACTTGGAATCTGTGTTATaGTTAAGTGTGCAGTGCCAGCTATCCTGCCAGTGTAATCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: NNTCFGRPGNLESVL*LSVQCQLSCQCNPQ Trigger: TTGGGGATTACACTGGCAGGATAGCTGGCACTGCACACTTAACAATAACACAGATTCCAAGTTGCCTGGCCTACCGAAGCAGGTGTTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| 3UTR CCA 72 bp | GCTCAAGCCTGGACCTATGATCCCTCCCTGAATGTCTaGGAAAGCCAAGGCAGGGGTCTGAGGAGGCTCCAC | + |
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Preference number: 3 (lower is better) Translates to: AQAWTYDPSLNV*ESQGRGLRRLH Trigger: GTGGAGCCTCCTCAGACCCCTGCCTTGGCTTTCCCAGACATTCAGGGAGGGATCATAGGTCCAGGCTTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| 3UTR TCA 72 bp | GCACTCTGGCCACATGTGAGCTCAAGCCTGGACCTATaGTCCCTCCCTGAATGTCTGGGAAAGCCAAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: ALWPHVSSSLDL*SLPECLGKPRQ Trigger: CTGCCTTGGCTTTCCCAGACATTCAGGGAGGGATCATAGGTCCAGGCTTGAGCTCACATGTGGCCAGAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| 3UTR GCA 72 bp | GGAGGTGTTCCTCCACCAAGTAGCAACAGCTTTTTGTaGACTCTGGCCACATGTGAGCTCAAGCCTGGACCT | + |
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Preference number: 3 (lower is better) Translates to: GGVPPPSSNSFL*TLATCELKPGP Trigger: AGGTCCAGGCTTGAGCTCACATGTGGCCAGAGTGCACAAAAAGCTGTTGCTACTTGGTGGAGGAACACCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| 3UTR-3UTR CAA 90 bp | TTTGCAGCTCAGACAAAACCACCAAGGAGGCCAGTGCAGGGTGGGAGATCCAGGAGTAGCAACAGCTTTTaGTGCACTCTGGCCACATGT | + |
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Preference number: 3 (lower is better) Translates to: FAAQTKPPRRPVQGGRSRSSNSF*CTLATC Trigger: ACATGTGGCCAGAGTGCACAAAAAGCTGTTGCTACT...CCTGGATCTCCCACCCTGCACTGGCCTCCTTGGTGGTTTTGTCTGAGCTGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| 3UTR CCA 72 bp | GCCAGTGTAATCCCCAAACCCTTGTTGAGATTTGCCTaGCCCATTGCTAACAAGCATAACACGGCCCCAGTT | + |
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Preference number: 3 (lower is better) Translates to: ASVIPKPLLRFA*PIANKHNTAPV Trigger: AACTGGGGCCGTGTTATGCTTGTTAGCAATGGGCCAGGCAAATCTCAACAAGGGTTTGGGGATTACACTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| 3UTR-3UTR CAA 90 bp | ATCCAGGCTCTGCCCACACAGATAGCTCGACACCGAGACTTCCTTAATTCCAGGAACAAGCACATGCATTaGGATTCTGTCTGTGTGATA | + |
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Preference number: 3 (lower is better) Translates to: IQALPTQIARHRDFLNSRNKHMH*DSVCVI Trigger: TATCACACAGACAGAATCCAAATGCATGTGCTTGTT...CCTGGAATTAAGGAAGTCTCGGTGTCGAGCTATCTGTGTGGGCAGAGCCTGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| 3UTR GCA 72 bp | GGCAACTTGGAATCTGTGTTATTGTTAAGTGTGCAGTaGCAGCTATCCTGCCAGTGTAATCCCCAAACCCTT | + |
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Preference number: 3 (lower is better) Translates to: GNLESVLLLSVQ*QLSCQCNPQTL Trigger: AAGGGTTTGGGGATTACACTGGCAGGATAGCTGGCACTGCACACTTAACAATAACACAGATTCCAAGTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| 3UTR CCA 72 bp | GGTATGCATGACCTTAAAGGAAGTCACAGCTCACAGTaGGCTCCAGTTTCACCATCTGAAAGCCTTATCATG | + |
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Preference number: 3 (lower is better) Translates to: GMHDLKGSHSSQ*APVSPSESLIM Trigger: CATGATAAGGCTTTCAGATGGTGAAACTGGAGCCCACTGTGAGCTGTGACTTCCTTTAAGGTCATGCATACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| 3UTR GCA 72 bp | TCTGTGTTATTGTTAAGTGTGCAGTGCCAGCTATCCTaGCAGTGTAATCCCCAAACCCTTGTTGAGATTTGC | + |
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Preference number: 3 (lower is better) Translates to: SVLLLSVQCQLS*QCNPQTLVEIC Trigger: GCAAATCTCAACAAGGGTTTGGGGATTACACTGGCAGGATAGCTGGCACTGCACACTTAACAATAACACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| CDS-3UTR GCA 90 bp | AGCAACAGCTTTTTGTGCACTCTGGCCACATGTGAGCTCAAGCCTGGACCTATGCACCAAGGAGGCCAGTaGAGGGTGGGAGATCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: SNSFLCTLATCELKPGPMHQGGQ*RVGDPG Trigger: GCCTGGATCTCCCACCCTGCACTGGCCTCCTTGGTG...CATAGGTCCAGGCTTGAGCTCACATGTGGCCAGAGTGCACAAAAAGCTGTTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| CDS-3UTR TCA 90 bp | GCTCAAGCCTGGACCTATGATCCCTCCCTGAATGTCTGGGAAAGCCAAGGCAGGCCTTTCACTACTGGTTaGCTCTCCTCTTTCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: AQAWTYDPSLNVWESQGRPFTTG*LSSFSG Trigger: CCCAGAGAAAGAGGAGAGTCAACCAGTAGTGAAAGG...CCTGCCTTGGCTTTCCCAGACATTCAGGGAGGGATCATAGGTCCAGGCTTGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| CDS-3UTR CCA 90 bp | GAGCACATTTACCAGAGTTTCTCCCATGAGGAGATGTTCCATTTCCACAAAGACGAGGCCAGTGCAGGGTaGGAGATCCAGGCTCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: EHIYQSFSHEEMFHFHKDEASAG*EIQALP Trigger: GGGCAGAGCCTGGATCTCCCACCCTGCACTGGCCTC...GTCTTTGTGGAAATGGAACATCTCCTCATGGGAGAAACTCTGGTAAATGTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| CDS-3UTR GCA 90 bp | TTGAGATTTGCCTGGCCCATTGCTAACAAGCATAACACGGCCCCAGTTTGCAGCAACACGGCCCCAGTTTaGAGCTCAGACAAAACCACC | + |
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Preference number: 4 (lower is better) Translates to: LRFAWPIANKHNTAPVCSNTAPV*SSDKTT Trigger: GGTGGTTTTGTCTGAGCTGCAAACTGGGGCCGTGTT...GCTGCAAACTGGGGCCGTGTTATGCTTGTTAGCAATGGGCCAGGCAAATCTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| CDS-3UTR GCA 90 bp | AGCAACAGCTTTTTGTGCACTCTGGCCACATGTGAGCTCAAGCCTGGACCTATGCAGTGCCAGCTATCCTaGCAGTGTAATCCCCAAACC | + |
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Preference number: 4 (lower is better) Translates to: SNSFLCTLATCELKPGPMQCQLS*QCNPQT Trigger: GGTTTGGGGATTACACTGGCAGGATAGCTGGCACTG...CATAGGTCCAGGCTTGAGCTCACATGTGGCCAGAGTGCACAAAAAGCTGTTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| CDS-3UTR CCA 90 bp | TTGGTATGCATGACCTTAAAGGAAGTCACAGCTCACAGTGGGCTCCAGTTTCACCCCTCCCTGAATGTCTaGGAAAGCCAAGGCAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: LVCMTLKEVTAHSGLQFHPSLNV*ESQGRG Trigger: ACCCCTGCCTTGGCTTTCCCAGACATTCAGGGAGGG...GTGAAACTGGAGCCCACTGTGAGCTGTGACTTCCTTTAAGGTCATGCATACCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| CDS-3UTR CCA 90 bp | AACAAGCATAACACGGCCCCAGTTTGCAGCTCAGACAAAACCACCAAGGAGGCCGCTTTTTGTGCACTCTaGCCACATGTGAGCTCAAGC | + |
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Preference number: 4 (lower is better) Translates to: NKHNTAPVCSSDKTTKEAAFCAL*PHVSSS Trigger: GCTTGAGCTCACATGTGGCCAGAGTGCACAAAAAGC...GGCCTCCTTGGTGGTTTTGTCTGAGCTGCAAACTGGGGCCGTGTTATGCTTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| CDS-3UTR TCA 90 bp | TGTTCCATTTCCACAAAGACAACGCATTCGGGGTTCGTAGAACAAGCACATGCAGCCAAGGCAGGGGTCTaGGGAGGCTCCACTTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: CSISTKTTHSGFVEQAHAAKAGV*GGSTFF Trigger: AAAGAAAGTGGAGCCTCCTCAGACCCCTGCCTTGGC...TGCATGTGCTTGTTCTACGAACCCCGAATGCGTTGTCTTTGTGGAAATGGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| CDS-3UTR GCA 90 bp | AACAAGCATAACACGGCCCCAGTTTGCAGCTCAGACAAAACCACCAAGGAGGCCCCCCTTCATCCCCTTTaGGTTCAGTATTTCCCATTC | + |
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Preference number: 4 (lower is better) Translates to: NKHNTAPVCSSDKTTKEAPLHPL*VQYFPF Trigger: GAATGGGAAATACTGAACGCAAAGGGGATGAAGGGG...GGCCTCCTTGGTGGTTTTGTCTGAGCTGCAAACTGGGGCCGTGTTATGCTTGTT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| CDS-3UTR CCA 90 bp | GCTCAAGCCTGGACCTATGATCCCTCCCTGAATGTCTGGGAAAGCCAAGGCAGGGAGGACAGCAACACCTaGAGTGGAATAAAACAATCT | + |
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Preference number: 4 (lower is better) Translates to: AQAWTYDPSLNVWESQGREDSNT*SGIKQS Trigger: AGATTGTTTTATTCCACTCCAGGTGTTGCTGTCCTC...CCTGCCTTGGCTTTCCCAGACATTCAGGGAGGGATCATAGGTCCAGGCTTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| CDS-3UTR CCA 90 bp | GCTCAAGCCTGGACCTATGATCCCTCCCTGAATGTCTGGGAAAGCCAAGGCAGGTTTGCCTTTCACTACTaGTTGACTCTCCTCTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: AQAWTYDPSLNVWESQGRFAFHY*LTLLFL Trigger: GAGAAAGAGGAGAGTCAACCAGTAGTGAAAGGCAAA...CCTGCCTTGGCTTTCCCAGACATTCAGGGAGGGATCATAGGTCCAGGCTTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| CDS-3UTR CCA 90 bp | ACCATGAATAACACCTGCTTCGGTAGGCCAGGCAACTTGGAATCTGTGTTATTGAGGAGCTTTTGTAGCTaGCGGGAGGGGTCCAGACAA | + |
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Preference number: 4 (lower is better) Translates to: TMNNTCFGRPGNLESVLLRSFCS*REGSRQ Trigger: TTGTCTGGACCCCTCCCGCCAGCTACAAAAGCTCCT...CAATAACACAGATTCCAAGTTGCCTGGCCTACCGAAGCAGGTGTTATTCATGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| 3UTR CAA 72 bp | GCCAGCTATCCTGCCAGTGTAATCCCCAAACCCTTGTaGAGATTTGCCTGGCCCATTGCTAACAAGCATAAC | + |
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Preference number: 4 (lower is better) Translates to: ASYPASVIPKPL*RFAWPIANKHN Trigger: GTTATGCTTGTTAGCAATGGGCCAGGCAAATCTCAACAAGGGTTTGGGGATTACACTGGCAGGATAGCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| 3UTR CAA 72 bp | TGCTTCGGTAGGCCAGGCAACTTGGAATCTGTGTTATaGTTAAGTGTGCAGTGCCAGCTATCCTGCCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: CFGRPGNLESVL*LSVQCQLSCQC Trigger: ACACTGGCAGGATAGCTGGCACTGCACACTTAACAATAACACAGATTCCAAGTTGCCTGGCCTACCGAAGCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| CDS-3UTR TCA 90 bp | ACCATGAATAACACCTGCTTCGGTAGGCCAGGCAACTTGGAATCTGTGTTATTGTTTCGGCGATTGAGTTaGAACCTGTGGTGGCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: TMNNTCFGRPGNLESVLLFRRLS*NLWWLR Trigger: CCTCAGCCACCACAGGTTTCAACTCAATCGCCGAAA...CAATAACACAGATTCCAAGTTGCCTGGCCTACCGAAGCAGGTGTTATTCATGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| CDS-3UTR TCA 90 bp | GTGTGCAGTGCCAGCTATCCTGCCAGTGTAATCCCCAAACCCTTGTTGAGATTTTTCATTTTCGGCGATTaGGTTGAAACCTGTGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: VCSASYPASVIPKPLLRFFIFGD*VETCGG Trigger: GCCACCACAGGTTTCAACTCAATCGCCGAAAATGAA...AAATCTCAACAAGGGTTTGGGGATTACACTGGCAGGATAGCTGGCACTGCACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| CDS-3UTR TCA 90 bp | GTGTGCAGTGCCAGCTATCCTGCCAGTGTAATCCCCAAACCCTTGTTGAGATTTCCAGAGTTTCTCCCATaGGGAGATGTTCCATTTCCA | + |
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Preference number: 4 (lower is better) Translates to: VCSASYPASVIPKPLLRFPEFLP*GDVPFP Trigger: TGGAAATGGAACATCTCCTCATGGGAGAAACTCTGG...AAATCTCAACAAGGGTTTGGGGATTACACTGGCAGGATAGCTGGCACTGCACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| CDS-3UTR TCA 90 bp | GAGCACATTTACCAGAGTTTCTCCCATGAGGAGATGTTCCATTTCCACAAAGACCACTCTGGCCACATGTaGGCTCAAGCCTGGACCTAT | + |
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Preference number: 4 (lower is better) Translates to: EHIYQSFSHEEMFHFHKDHSGHM*AQAWTY Trigger: ATAGGTCCAGGCTTGAGCTCACATGTGGCCAGAGTG...GTCTTTGTGGAAATGGAACATCTCCTCATGGGAGAAACTCTGGTAAATGTGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| CDS-3UTR CCA 90 bp | TTGGTATGCATGACCTTAAAGGAAGTCACAGCTCACAGTGGGCTCCAGTTTCACCCATGGGGTGGTACGTaGAAGAAGATCTGTGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: LVCMTLKEVTAHSGLQFHPWGGT*KKICGE Trigger: TTCACCACAGATCTTCTTCCACGTACCACCCCATGG...GTGAAACTGGAGCCCACTGTGAGCTGTGACTTCCTTTAAGGTCATGCATACCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| CDS-3UTR TCA 90 bp | GATTTGCCTGGCCCATTGCTAACAAGCATAACACGGCCCCAGTTTGCAGCTCAGAAGCCACAGAGATTCTaGTGGAACTTTAATGGAATG | + |
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Preference number: 4 (lower is better) Translates to: DLPGPLLTSITRPQFAAQKPQRF*WNFNGM Trigger: CATTCCATTAAAGTTCCATCAGAATCTCTGTGGCTT...CTGAGCTGCAAACTGGGGCCGTGTTATGCTTGTTAGCAATGGGCCAGGCAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| CDS-3UTR TCA 90 bp | GCATTTGGATTCTGTCTGTGTGATAGCCAGATGTCAGGTCTAAGGTGTAATTTACGAACGGGAAAAACGTaGCGTCCATGGTGCAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: AFGFCLCDSQMSGLRCNLRTGKT*RPWCRS Trigger: GCTCCTGCACCATGGACGTCACGTTTTTCCCGTTCG...TAAATTACACCTTAGACCTGACATCTGGCTATCACACAGACAGAATCCAAATGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| CDS-3UTR TCA 90 bp | ACCATGAATAACACCTGCTTCGGTAGGCCAGGCAACTTGGAATCTGTGTTATTGCTCTTTCTCTGGGGATaGGTAGCGATCCACATGATC | + |
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Preference number: 4 (lower is better) Translates to: TMNNTCFGRPGNLESVLLLFLWG*VAIHMI Trigger: GATCATGTGGATCGCTACTCATCCCCAGAGAAAGAG...CAATAACACAGATTCCAAGTTGCCTGGCCTACCGAAGCAGGTGTTATTCATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| CDS-3UTR TCA 90 bp | ATGAGGAGATGTTCCATTTCCACAAAGACAACGCATTCGGGGTTCGTAGAACAACCTATGATCCCTCCCTaGATGTCTGGGAAAGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: MRRCSISTKTTHSGFVEQPMIPP*MSGKAK Trigger: CTTGGCTTTCCCAGACATTCAGGGAGGGATCATAGG...TTGTTCTACGAACCCCGAATGCGTTGTCTTTGTGGAAATGGAACATCTCCTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| CDS-3UTR GCA 90 bp | ACCATGAATAACACCTGCTTCGGTAGGCCAGGCAACTTGGAATCTGTGTTATTGACCATGAATAACACCTaGTTCGGTAGGCCAGGCAAC | + |
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Preference number: 4 (lower is better) Translates to: TMNNTCFGRPGNLESVLLTMNNT*FGRPGN Trigger: GTTGCCTGGCCTACCGAAGCAGGTGTTATTCATGGT...CAATAACACAGATTCCAAGTTGCCTGGCCTACCGAAGCAGGTGTTATTCATGGT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| CDS-3UTR CCA 90 bp | AGCAACAGCTTTTTGTGCACTCTGGCCACATGTGAGCTCAAGCCTGGACCTATGCAGCAACACCTGGAGTaGAATAAAACAATCTCAACC | + |
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Preference number: 4 (lower is better) Translates to: SNSFLCTLATCELKPGPMQQHLE*NKTIST Trigger: GGTTGAGATTGTTTTATTCCACTCCAGGTGTTGCTG...CATAGGTCCAGGCTTGAGCTCACATGTGGCCAGAGTGCACAAAAAGCTGTTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| CDS-3UTR CCA 90 bp | TTAAGTGTGCAGTGCCAGCTATCCTGCCAGTGTAATCCCCAAACCCTTGTTGAGTTCCAGCGTAACTTGTaGTCTGTCCATTCCTGTTTG | + |
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Preference number: 4 (lower is better) Translates to: LSVQCQLSCQCNPQTLVEFQRNL*SVHSCL Trigger: CAAACAGGAATGGACAGACCACAAGTTACGCTGGAA...CTCAACAAGGGTTTGGGGATTACACTGGCAGGATAGCTGGCACTGCACACTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| CDS-3UTR TCA 90 bp | ATCCAGGCTCTGCCCACACAGATAGCTCGACACCGAGACTTCCTTAATTCCAGGTGGAAGACGATGGGATaGTTTCTTCAATCACTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: IQALPTQIARHRDFLNSRWKTMG*FLQSLK Trigger: TTTTAGTGATTGAAGAAATCATCCCATCGTCTTCCA...CCTGGAATTAAGGAAGTCTCGGTGTCGAGCTATCTGTGTGGGCAGAGCCTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR GCA 90 bp | GATTTGCCTGGCCCATTGCTAACAAGCATAACACGGCCCCAGTTTGCAGCTCAGAATTTTGGAAGTTTCTaGAGAAAGAGCCTCTTAACC | + |
|
Preference number: 4 (lower is better) Translates to: DLPGPLLTSITRPQFAAQNFGSF*RKSLLT Trigger: GGTTAAGAGGCTCTTTCTGCAGAAACTTCCAAAATT...CTGAGCTGCAAACTGGGGCCGTGTTATGCTTGTTAGCAATGGGCCAGGCAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR GCA 90 bp | ACCATGAATAACACCTGCTTCGGTAGGCCAGGCAACTTGGAATCTGTGTTATTGAGCAACAGCTTTTTGTaGACTCTGGCCACATGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TMNNTCFGRPGNLESVLLSNSFL*TLATCE Trigger: CTCACATGTGGCCAGAGTGCACAAAAAGCTGTTGCT...CAATAACACAGATTCCAAGTTGCCTGGCCTACCGAAGCAGGTGTTATTCATGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR CCA 90 bp | GTGTGCAGTGCCAGCTATCCTGCCAGTGTAATCCCCAAACCCTTGTTGAGATTTAACCAGCATAAAATCTaGGAGCATCGTGATGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VCSASYPASVIPKPLLRFNQHKI*EHRDVS Trigger: ACTGACATCACGATGCTCCCAGATTTTATGCTGGTT...AAATCTCAACAAGGGTTTGGGGATTACACTGGCAGGATAGCTGGCACTGCACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR CCA 90 bp | TTGAGATTTGCCTGGCCCATTGCTAACAAGCATAACACGGCCCCAGTTTGCAGCGACTTTGGAAGACGATaGGATGATTTCTTCAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LRFAWPIANKHNTAPVCSDFGRR*DDFFNH Trigger: GTGATTGAAGAAATCATCCCATCGTCTTCCAAAGTC...GCTGCAAACTGGGGCCGTGTTATGCTTGTTAGCAATGGGCCAGGCAAATCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| 3UTR CAA 72 bp | ACCATGAATAACACCTGCTTCGGTAGGCCAGGCAACTaGGAATCTGTGTTATTGTTAAGTGTGCAGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TMNNTCFGRPGN*ESVLLLSVQCQ Trigger: CTGGCACTGCACACTTAACAATAACACAGATTCCAAGTTGCCTGGCCTACCGAAGCAGGTGTTATTCATGGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR GCA 90 bp | GAGCACATTTACCAGAGTTTCTCCCATGAGGAGATGTTCCATTTCCACAAAGACTTGTTAAGTGTGCAGTaGCAGCTATCCTGCCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: EHIYQSFSHEEMFHFHKDLLSVQ*QLSCQC Trigger: ACACTGGCAGGATAGCTGGCACTGCACACTTAACAA...GTCTTTGTGGAAATGGAACATCTCCTCATGGGAGAAACTCTGGTAAATGTGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR CCA 90 bp | TGTTCCATTTCCACAAAGACAACGCATTCGGGGTTCGTAGAACAAGCACATGCAGTTCAAAATCCGAAGTaGAACCCAAGAGGACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CSISTKTTHSGFVEQAHAVQNPK*NPRGQQ Trigger: TTGCTGTCCTCTTGGGTTCCACTTCGGATTTTGAAC...TGCATGTGCTTGTTCTACGAACCCCGAATGCGTTGTCTTTGTGGAAATGGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR TCA 90 bp | GAGCACATTTACCAGAGTTTCTCCCATGAGGAGATGTTCCATTTCCACAAAGACAATCTGGGAGCATCGTaGTGTCAGTTTCAGAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: EHIYQSFSHEEMFHFHKDNLGAS*CQFQKD Trigger: GTCTTTCTGAAACTGACATCACGATGCTCCCAGATT...GTCTTTGTGGAAATGGAACATCTCCTCATGGGAGAAACTCTGGTAAATGTGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR TCA 90 bp | ATTTACCAGAGTTTCTCCCATGAGGAGATGTTCCATTTCCACAAAGACAACGCACTGTCCATTCCTGTTTaGGCCACACATTGGTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: IYQSFSHEEMFHFHKDNALSIPV*ATHWLS Trigger: TGACAACCAATGTGTGGCTCAAACAGGAATGGACAG...TGCGTTGTCTTTGTGGAAATGGAACATCTCCTCATGGGAGAAACTCTGGTAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR TCA 90 bp | ACCATGAATAACACCTGCTTCGGTAGGCCAGGCAACTTGGAATCTGTGTTATTGTTGGTTGTCATCAGCTaGTTCTTTTCATCCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: TMNNTCFGRPGNLESVLLLVVIS*FFSSTS Trigger: AGATGTGGATGAAAAGAATCAGCTGATGACAACCAA...CAATAACACAGATTCCAAGTTGCCTGGCCTACCGAAGCAGGTGTTATTCATGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR TCA 90 bp | CACATTTACCAGAGTTTCTCCCATGAGGAGATGTTCCATTTCCACAAAGACAACGACAACAGTTCCGTTTaGTTTCACGATGACCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HIYQSFSHEEMFHFHKDNDNSSV*FHDDLG Trigger: ACCAAGGTCATCGTGAAATCAAACGGAACTGTTGTC...GTTGTCTTTGTGGAAATGGAACATCTCCTCATGGGAGAAACTCTGGTAAATGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR TCA 90 bp | GAGCACATTTACCAGAGTTTCTCCCATGAGGAGATGTTCCATTTCCACAAAGACGAAGAAGATCTGTGGTaGACGTTAATGACAAACACG | + |
|
Preference number: 4 (lower is better) Translates to: EHIYQSFSHEEMFHFHKDEEDLW*TLMTNT Trigger: CGTGTTTGTCATTAACGTTCACCACAGATCTTCTTC...GTCTTTGTGGAAATGGAACATCTCCTCATGGGAGAAACTCTGGTAAATGTGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR TCA 90 bp | TGTTCCATTTCCACAAAGACAACGCATTCGGGGTTCGTAGAACAAGCACATGCAATTCGGTCAAGAACTTaGGCTACAAATTTCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSISTKTTHSGFVEQAHAIRSRT*ATNFQS Trigger: AGACTGGAAATTTGTAGCTCAAGTTCTTGACCGAAT...TGCATGTGCTTGTTCTACGAACCCCGAATGCGTTGTCTTTGTGGAAATGGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR CCA 90 bp | TTAAGTGTGCAGTGCCAGCTATCCTGCCAGTGTAATCCCCAAACCCTTGTTGAGTCCACATCTACAAGCTaGGATATTTTCAATCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSVQCQLSCQCNPQTLVESTSTS*DIFNPK Trigger: TTTTGGATTGAAAATATCCCAGCTTGTAGATGTGGA...CTCAACAAGGGTTTGGGGATTACACTGGCAGGATAGCTGGCACTGCACACTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR TCA 90 bp | CACATTTACCAGAGTTTCTCCCATGAGGAGATGTTCCATTTCCACAAAGACAACCTTGGAACAAATGTCTaGGGAGGGCATCTTCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: HIYQSFSHEEMFHFHKDNLGTNV*GGHLHF Trigger: AAAATGAAGATGCCCTCCTCAGACATTTGTTCCAAG...GTTGTCTTTGTGGAAATGGAACATCTCCTCATGGGAGAAACTCTGGTAAATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR CCA 90 bp | TTCTCCCATGAGGAGATGTTCCATTTCCACAAAGACAACGCATTCGGGGTTCGTAAACCAAGACCGATGTaGATAATGAAAGTTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FSHEEMFHFHKDNAFGVRKPRPM*IMKVFL Trigger: GAGAAAAACTTTCATTATCCACATCGGTCTTGGTTT...ACGAACCCCGAATGCGTTGTCTTTGTGGAAATGGAACATCTCCTCATGGGAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR CCA 90 bp | GCATTTGGATTCTGTCTGTGTGATAGCCAGATGTCAGGTCTAAGGTGTAATTTATTGTTGAGATTTGCCTaGCCCATTGCTAACAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AFGFCLCDSQMSGLRCNLLLRFA*PIANKH Trigger: ATGCTTGTTAGCAATGGGCCAGGCAAATCTCAACAA...TAAATTACACCTTAGACCTGACATCTGGCTATCACACAGACAGAATCCAAATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR CCA 90 bp | ATTTACCAGAGTTTCTCCCATGAGGAGATGTTCCATTTCCACAAAGACAACGCACAGTCTTGTACTACCTaGCTGATAAAATGTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IYQSFSHEEMFHFHKDNAQSCTT*LIKCSF Trigger: GAAAGAACATTTTATCAGCCAGGTAGTACAAGACTG...TGCGTTGTCTTTGTGGAAATGGAACATCTCCTCATGGGAGAAACTCTGGTAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS GCA 90 bp | AACCTGTGGTGGGCAGCTGTGCTCCCTGTGAAGGTACAGGAATCCTaGTCCTCACCAAGATCCAGGGGCAGCAAGCAGCTCTGCTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NLWWAAVLPVKVQES*SSPRSRGSKQLCSF Trigger: GAAAGAGCAGAGCTGCTTGCTGCCCCTGGATCTTGGTGAGGAGCAGGATTCCTGTACCTTCACAGGGAGCACAGCTGCCCACCACAGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531610.5 ENST00000534391.1 |
||
| CDS TCA 90 bp | GGAGCTTTTGTAGCTGGCGGGAGGGGTCCAGACAACAGTTCCGTTTaGTTTCACGATGACCTTGGTCATCAGGGAGCCTTCGAAGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GAFVAGGRGPDNSSV*FHDDLGHQGAFEAA Trigger: GGCCGCTTCGAAGGCTCCCTGATGACCAAGGTCATCGTGAAATCAAACGGAACTGTTGTCTGGACCCCTCCCGCCAGCTACAAAAGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS TCA 90 bp | AGCTGGCGGGAGGGGTCCAGACAACAGTTCCGTTTGATTTCACGATaGCCTTGGTCATCAGGGAGCCTTCGAAGCGGCCGTCAGCATTTT | + |
|
Preference number: 5 (lower is better) Translates to: SWREGSRQQFRLISR*PWSSGSLRSGRQHF Trigger: AAAATGCTGACGGCCGCTTCGAAGGCTCCCTGATGACCAAGGTCATCGTGAAATCAAACGGAACTGTTGTCTGGACCCCTCCCGCCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS GCA 90 bp | CAGGAATCCTGCTCCTCACCAAGATCCAGGGGCAGCAAGCAGCTCTaGTCTTTCACGCACAGCATACATCTCCACCTGTGTTACCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: QESCSSPRSRGSKQL*SFTHSIHLHLCYHC Trigger: ACAGTGGTAACACAGGTGGAGATGTATGCTGTGCGTGAAAGAGCAGAGCTGCTTGCTGCCCCTGGATCTTGGTGAGGAGCAGGATTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531610.5 ENST00000534391.1 |
||
| CDS-3UTR CAA 90 bp | TTTGCAGCTCAGACAAAACCACCAAGGAGGCCAGTGCAGGGTGGGAGATCCAGGGATTTGCCTGGCCCATaGCTAACAAGCATAACACGG | + |
|
Preference number: 5 (lower is better) Translates to: FAAQTKPPRRPVQGGRSRDLPGP*LTSITR Trigger: CCGTGTTATGCTTGTTAGCAATGGGCCAGGCAAATC...CCTGGATCTCCCACCCTGCACTGGCCTCCTTGGTGGTTTTGTCTGAGCTGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR CAA 90 bp | TTTGCAGCTCAGACAAAACCACCAAGGAGGCCAGTGCAGGGTGGGAGATCCAGGATCCCCAAACCCTTGTaGAGATTTGCCTGGCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: FAAQTKPPRRPVQGGRSRIPKPL*RFAWPI Trigger: AATGGGCCAGGCAAATCTCAACAAGGGTTTGGGGAT...CCTGGATCTCCCACCCTGCACTGGCCTCCTTGGTGGTTTTGTCTGAGCTGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR CAA 90 bp | TTTGCAGCTCAGACAAAACCACCAAGGAGGCCAGTGCAGGGTGGGAGATCCAGGTCTGTCCATTCCTGTTaGAGCCACACATTGGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: FAAQTKPPRRPVQGGRSRSVHSC*SHTLVV Trigger: GACAACCAATGTGTGGCTCAAACAGGAATGGACAGA...CCTGGATCTCCCACCCTGCACTGGCCTCCTTGGTGGTTTTGTCTGAGCTGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR CAA 90 bp | TTGAGATTTGCCTGGCCCATTGCTAACAAGCATAACACGGCCCCAGTTTGCAGCTCCCCTTCATCCCCTTaGCGTTCAGTATTTCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: LRFAWPIANKHNTAPVCSSPSSP*RSVFPI Trigger: AATGGGAAATACTGAACGCAAAGGGGATGAAGGGGA...GCTGCAAACTGGGGCCGTGTTATGCTTGTTAGCAATGGGCCAGGCAAATCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR CAA 90 bp | TGTTCCATTTCCACAAAGACAACGCATTCGGGGTTCGTAGAACAAGCACATGCAGATTTCACGATGACCTaGGTCATCAGGGAGCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: CSISTKTTHSGFVEQAHADFTMT*VIREPS Trigger: CGAAGGCTCCCTGATGACCAAGGTCATCGTGAAATC...TGCATGTGCTTGTTCTACGAACCCCGAATGCGTTGTCTTTGTGGAAATGGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR CAA 90 bp | ACCATGAATAACACCTGCTTCGGTAGGCCAGGCAACTTGGAATCTGTGTTATTGGCCTTTCACTACTGGTaGACTCTCCTCTTTCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TMNNTCFGRPGNLESVLLAFHYW*TLLFLW Trigger: CCAGAGAAAGAGGAGAGTCAACCAGTAGTGAAAGGC...CAATAACACAGATTCCAAGTTGCCTGGCCTACCGAAGCAGGTGTTATTCATGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR CAA 90 bp | ATGAGGAGATGTTCCATTTCCACAAAGACAACGCATTCGGGGTTCGTAGAACAAGTAATCCCCAAACCCTaGTTGAGATTTGCCTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: MRRCSISTKTTHSGFVEQVIPKP*LRFAWP Trigger: GGGCCAGGCAAATCTCAACAAGGGTTTGGGGATTAC...TTGTTCTACGAACCCCGAATGCGTTGTCTTTGTGGAAATGGAACATCTCCTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR CAA 90 bp | TTGAGATTTGCCTGGCCCATTGCTAACAAGCATAACACGGCCCCAGTTTGCAGCTTGGAATCTGTGTTATaGTTAAGTGTGCAGTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LRFAWPIANKHNTAPVCSLESVL*LSVQCQ Trigger: CTGGCACTGCACACTTAACAATAACACAGATTCCAA...GCTGCAAACTGGGGCCGTGTTATGCTTGTTAGCAATGGGCCAGGCAAATCTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR CAA 90 bp | ATCCAGGCTCTGCCCACACAGATAGCTCGACACCGAGACTTCCTTAATTCCAGGTACAAATTTCCAGTCTaGTACTACCTGGCTGATAAA | + |
|
Preference number: 5 (lower is better) Translates to: IQALPTQIARHRDFLNSRYKFPV*YYLADK Trigger: TTTATCAGCCAGGTAGTACAAGACTGGAAATTTGTA...CCTGGAATTAAGGAAGTCTCGGTGTCGAGCTATCTGTGTGGGCAGAGCCTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS TCA 90 bp | CCACATCTTCAAAGCAGGGGTAAAAATCAGAACCGAGCCTGTTACTaGCACTATCAGAAAGAGCCACAGGAAGATTCGGTCAAGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: PHLQSRGKNQNRACY*HYQKEPQEDSVKNL Trigger: CAAGTTCTTGACCGAATCTTCCTGTGGCTCTTTCTGATAGTGTCAGTAACAGGCTCGGTTCTGATTTTTACCCCTGCTTTGAAGATGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR CAA 90 bp | ATTTACCAGAGTTTCTCCCATGAGGAGATGTTCCATTTCCACAAAGACAACGCAGGATTCCAGCGTAACTaGTGGTCTGTCCATTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: IYQSFSHEEMFHFHKDNAGFQRN*WSVHSC Trigger: ACAGGAATGGACAGACCACAAGTTACGCTGGAATCC...TGCGTTGTCTTTGTGGAAATGGAACATCTCCTCATGGGAGAAACTCTGGTAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR CAA 90 bp | TTGGTATGCATGACCTTAAAGGAAGTCACAGCTCACAGTGGGCTCCAGTTTCACATGAGAGGAATGACTTaGGAAGACGATGGGATGATT | + |
|
Preference number: 5 (lower is better) Translates to: LVCMTLKEVTAHSGLQFHMRGMT*EDDGMI Trigger: AATCATCCCATCGTCTTCCAAAGTCATTCCTCTCAT...GTGAAACTGGAGCCCACTGTGAGCTGTGACTTCCTTTAAGGTCATGCATACCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR CAA 90 bp | GTGTGCAGTGCCAGCTATCCTGCCAGTGTAATCCCCAAACCCTTGTTGAGATTTAACAAGCACATGCATTaGGATTCTGTCTGTGTGATA | + |
|
Preference number: 5 (lower is better) Translates to: VCSASYPASVIPKPLLRFNKHMH*DSVCVI Trigger: TATCACACAGACAGAATCCAAATGCATGTGCTTGTT...AAATCTCAACAAGGGTTTGGGGATTACACTGGCAGGATAGCTGGCACTGCACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR CAA 90 bp | ATGAGGAGATGTTCCATTTCCACAAAGACAACGCATTCGGGGTTCGTAGAACAAAGTAGCAACAGCTTTTaGTGCACTCTGGCCACATGT | + |
|
Preference number: 5 (lower is better) Translates to: MRRCSISTKTTHSGFVEQSSNSF*CTLATC Trigger: ACATGTGGCCAGAGTGCACAAAAAGCTGTTGCTACT...TTGTTCTACGAACCCCGAATGCGTTGTCTTTGTGGAAATGGAACATCTCCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR CAA 90 bp | TGTTCCATTTCCACAAAGACAACGCATTCGGGGTTCGTAGAACAAGCACATGCAGGTAGGCCAGGCAACTaGGAATCTGTGTTATTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: CSISTKTTHSGFVEQAHAGRPGN*ESVLLL Trigger: TAACAATAACACAGATTCCAAGTTGCCTGGCCTACC...TGCATGTGCTTGTTCTACGAACCCCGAATGCGTTGTCTTTGTGGAAATGGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR CAA 90 bp | GCATTTGGATTCTGTCTGTGTGATAGCCAGATGTCAGGTCTAAGGTGTAATTTATTTTCGGCGATTGAGTaGAAACCTGTGGTGGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: AFGFCLCDSQMSGLRCNLFSAIE*KPVVAE Trigger: CTCAGCCACCACAGGTTTCAACTCAATCGCCGAAAA...TAAATTACACCTTAGACCTGACATCTGGCTATCACACAGACAGAATCCAAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS-3UTR CAA 90 bp | GAGCACATTTACCAGAGTTTCTCCCATGAGGAGATGTTCCATTTCCACAAAGACGATTCGGTCAAGAACTaGAGCTACAAATTTCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: EHIYQSFSHEEMFHFHKDDSVKN*SYKFPV Trigger: GACTGGAAATTTGTAGCTCAAGTTCTTGACCGAATC...GTCTTTGTGGAAATGGAACATCTCCTCATGGGAGAAACTCTGGTAAATGTGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS TCA 90 bp | ACTGACACTATCAGAAAGAGCCACAGGAAGATTCGGTCAAGAACTTaGGCTACAAATTTCCAGTCTTGTACTACCTGGCTGATAAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: TDTIRKSHRKIRSRT*ATNFQSCTTWLIKC Trigger: ACATTTTATCAGCCAGGTAGTACAAGACTGGAAATTTGTAGCTCAAGTTCTTGACCGAATCTTCCTGTGGCTCTTTCTGATAGTGTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS TCA 90 bp | GTCAGCATTTTCAAAGAGAACTATGTCAGGAAGCCACAGAGATTCTaGTGGAACTTTAATGGAATGGATCCCACCATAATCATCAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: VSIFKENYVRKPQRF*WNFNGMDPTIIIRI Trigger: AATCCTGATGATTATGGTGGGATCCATTCCATTAAAGTTCCATCAGAATCTCTGTGGCTTCCTGACATAGTTCTCTTTGAAAATGCTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS GCA 72 bp | TGGGCAGCTGTGCTCCCTGTGAAGGTACAGGAATCCTaGTCCTCACCAAGATCCAGGGGCAGCAAGCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: WAAVLPVKVQES*SSPRSRGSKQL Trigger: GAGCTGCTTGCTGCCCCTGGATCTTGGTGAGGAGCAGGATTCCTGTACCTTCACAGGGAGCACAGCTGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531610.5 ENST00000534391.1 |
||
| CDS TCA 72 bp | GAGGGGTCCAGACAACAGTTCCGTTTGATTTCACGATaGCCTTGGTCATCAGGGAGCCTTCGAAGCGGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: EGSRQQFRLISR*PWSSGSLRSGR Trigger: ACGGCCGCTTCGAAGGCTCCCTGATGACCAAGGTCATCGTGAAATCAAACGGAACTGTTGTCTGGACCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS TCA 72 bp | GTAGCTGGCGGGAGGGGTCCAGACAACAGTTCCGTTTaGTTTCACGATGACCTTGGTCATCAGGGAGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VAGGRGPDNSSV*FHDDLGHQGAF Trigger: GAAGGCTCCCTGATGACCAAGGTCATCGTGAAATCAAACGGAACTGTTGTCTGGACCCCTCCCGCCAGCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
||
| CDS GCA 72 bp | TGCTCCTCACCAAGATCCAGGGGCAGCAAGCAGCTCTaGTCTTTCACGCACAGCATACATCTCCACCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: CSSPRSRGSKQL*SFTHSIHLHLC Trigger: ACACAGGTGGAGATGTATGCTGTGCGTGAAAGAGCAGAGCTGCTTGCTGCCCCTGGATCTTGGTGAGGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531610.5 ENST00000534391.1 |
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| CDS CAA 90 bp | GCGGGAGGGGTCCAGACAACAGTTCCGTTTGATTTCACGATGACCTaGGTCATCAGGGAGCCTTCGAAGCGGCCGTCAGCATTTTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: AGGVQTTVPFDFTMT*VIREPSKRPSAFSK Trigger: CTTTGAAAATGCTGACGGCCGCTTCGAAGGCTCCCTGATGACCAAGGTCATCGTGAAATCAAACGGAACTGTTGTCTGGACCCCTCCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| CDS TCA 72 bp | CAAATGTCTGAGGAGGGCATCTTCATTTTCGGCGATTaGGTTGAAACCTGTGGTGGGCAGCTGTGCTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: QMSEEGIFIFGD*VETCGGQLCSL Trigger: CAGGGAGCACAGCTGCCCACCACAGGTTTCAACTCAATCGCCGAAAATGAAGATGCCCTCCTCAGACATTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534391.1 |
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| CDS GCA 72 bp | GCATACATCTCCACCTGTGTTACCACTGTCAGAAGGTaGACTTTCCGTCTGAGGAAGGGATGCCAAGGACGA | + |
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Preference number: 6 (lower is better) Translates to: AYISTCVTTVRR*TFRLRKGCQGR Trigger: TCGTCCTTGGCATCCCTTCCTCAGACGGAAAGTGCACCTTCTGACAGTGGTAACACAGGTGGAGATGTATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534391.1 |
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| CDS GCA 72 bp | GCATACATCTCCACCTGTGTTACCACTGTCAGAAGGTaGACTTTCCGTCTTGGCCTCCCAAAGTGTTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: AYISTCVTTVRR*TFRLGLPKCWD Trigger: ATCCCAACACTTTGGGAGGCCAAGACGGAAAGTGCACCTTCTGACAGTGGTAACACAGGTGGAGATGTATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531610.5 |
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| CDS TCA 72 bp | GGGGCCATGGGGTGGTACGTGGAAGAAGATCTGTGGTaGACGTTAATGACAAACACGGTAACAATGATGGAC | + |
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Preference number: 6 (lower is better) Translates to: GAMGWYVEEDLW*TLMTNTVTMMD Trigger: GTCCATCATTGTTACCGTGTTTGTCATTAACGTTCACCACAGATCTTCTTCCACGTACCACCCCATGGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| CDS TCA 72 bp | ATTTCCTCTTGCATTCCTAGACACTGGAACCATTCCTaGGGAAGGGATGCCAAGGACGATGAGAACCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: ISSCIPRHWNHS*GRDAKDDENQH Trigger: ATGCTGGTTCTCATCGTCCTTGGCATCCCTTCCTCAGGAATGGTTCCAGTGTCTAGGAATGCAAGAGGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531610.5 |
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| CDS CCA 72 bp | AGGGATGCCAAGGACGATGAGAACCAGCATAAAATCTaGGAGCATCGTGATGTCAGTTTCAGAAAGACAGTT | + |
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Preference number: 6 (lower is better) Translates to: RDAKDDENQHKI*EHRDVSFRKTV Trigger: AACTGTCTTTCTGAAACTGACATCACGATGCTCCCAGATTTTATGCTGGTTCTCATCGTCCTTGGCATCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000289957.3 ENST00000531610.5 ENST00000534391.1 |
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| CDS TCA 72 bp | ATCAGAAAGAGCCACAGGAAGATTCGGTCAAGAACTTaGGCTACAAATTTCCAGTCTTGTACTACCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: IRKSHRKIRSRT*ATNFQSCTTWL Trigger: CAGCCAGGTAGTACAAGACTGGAAATTTGTAGCTCAAGTTCTTGACCGAATCTTCCTGTGGCTCTTTCTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| CDS CAA 72 bp | TATCAGAAAGAGCCACAGGAAGATTCGGTCAAGAACTaGAGCTACAAATTTCCAGTCTTGTACTACCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: YQKEPQEDSVKN*SYKFPVLYYLA Trigger: AGCCAGGTAGTACAAGACTGGAAATTTGTAGCTCAAGTTCTTGACCGAATCTTCCTGTGGCTCTTTCTGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| CDS TCA 72 bp | CATTCCTGTTTGAGCCACACATTGGTTGTCATCAGCTaGTTCTTTTCATCCACATCTACAAGCTGGGATATT | + |
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Preference number: 6 (lower is better) Translates to: HSCLSHTLVVIS*FFSSTSTSWDI Trigger: AATATCCCAGCTTGTAGATGTGGATGAAAAGAATCAGCTGATGACAACCAATGTGTGGCTCAAACAGGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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| CDS TCA 72 bp | TTCAAAGAGAACTATGTCAGGAAGCCACAGAGATTCTaGTGGAACTTTAATGGAATGGATCCCACCATAATC | + |
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Preference number: 6 (lower is better) Translates to: FKENYVRKPQRF*WNFNGMDPTII Trigger: GATTATGGTGGGATCCATTCCATTAAAGTTCCATCAGAATCTCTGTGGCTTCCTGACATAGTTCTCTTTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289957.3 |
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