RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHRNB2 (Homo sapiens)

Ensembl gene IDs: ENSG00000160716

Ensembl transcript IDs: ENST00000368476.4, ENST00000635876.1, ENST00000636034.1, ENST00000637900.1

Found 575 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACTTGGCAGGAATCGCTGACCACTGTGGGGCCCACCCAGTCCAGCTaGTGTCCACTCAAGCAGCGGCAGGTGTCAGGTCACACCCAGGCC +
Preference number: 1 (lower is better)
Translates to: TWQESLTTVGPTQSS*CPLKQRQVSGHTQA
Trigger: GGCCTGGGTGTGACCTGACACCTGCCGCTGCTTGAGTGGACAGCAGCTGGACTGGGTGGGCCCCACAGTGGTCAGCGATTCCTGCCAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR GCA 90 bp CAGGGTACAGCTTCCAGGGACACATGGGGCAGGAAGCCGAGGCTATaGTTTCTGAGGTGTCGCTGGCAGCAGCAGCCCTGTCCTTCCCAA +
Preference number: 1 (lower is better)
Translates to: QGTASRDTWGRKPRL*FLRCRWQQQPCPSQ
Trigger: TTGGGAAGGACAGGGCTGCTGCTGCCAGCGACACCTCAGAAAGCATAGCCTCGGCTTCCTGCCCCATGTGTCCCTGGAAGCTGTACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR CCA 90 bp GTTCGCTGTCTAGTCAAGGTCGGTGAATGGGAGTCTGGCCAGCACTaGTTGGGCGGGGAGGGATGGTATGACACCTGCCTGACTCTGCCC +
Preference number: 1 (lower is better)
Translates to: VRCLVKVGEWESGQH*LGGEGWYDTCLTLP
Trigger: GGGCAGAGTCAGGCAGGTGTCATACCATCCCTCCCCGCCCAACCAGTGCTGGCCAGACTCCCATTCACCGACCTTGACTAGACAGCGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR TCA 90 bp AGAGACACTCCCTGCTACCAAGAAAAGGTGTCCGTGAGCCCATCCTaGCAGACGAGATGCGCTGAGGCCTGTCTCCTGCAGCCACTGGCT +
Preference number: 1 (lower is better)
Translates to: RDTPCYQEKVSVSPS*QTRCAEACLLQPLA
Trigger: AGCCAGTGGCTGCAGGAGACAGGCCTCAGCGCATCTCGTCTGTCAGGATGGGCTCACGGACACCTTTTCTTGGTAGCAGGGAGTGTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR GCA 90 bp CATGACTTGGAGGCAGCAGACAATCCTGTCCCCTTCCTGGCCCCTTaGCCATCACTCCTCAGGGTGGATGGCTCTGCCATCTCTGTCTTC +
Preference number: 1 (lower is better)
Translates to: HDLEAADNPVPFLAP*PSLLRVDGSAISVF
Trigger: GAAGACAGAGATGGCAGAGCCATCCACCCTGAGGAGTGATGGGCAAGGGGCCAGGAAGGGGACAGGATTGTCTGCTGCCTCCAAGTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR CCA 90 bp CAAAGCAGTTGGTCCAGCCTCCAGGTTGGAGCTGCTGTGTGTGGATaGAGGCGTGGGGGAGGAGGGACTCCAGATGAAGCAAAAGGATGG +
Preference number: 1 (lower is better)
Translates to: QSSWSSLQVGAAVCG*RRGGGGTPDEAKGW
Trigger: CCATCCTTTTGCTTCATCTGGAGTCCCTCCTCCCCCACGCCTCCATCCACACACAGCAGCTCCAACCTGGAGGCTGGACCAACTGCTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR CCA 90 bp TCTTCTCCCATGACTTGGAGGCAGCAGACAATCCTGTCCCCTTCCTaGCCCCTTGCCCATCACTCCTCAGGGTGGATGGCTCTGCCATCT +
Preference number: 1 (lower is better)
Translates to: SSPMTWRQQTILSPS*PLAHHSSGWMALPS
Trigger: AGATGGCAGAGCCATCCACCCTGAGGAGTGATGGGCAAGGGGCCAGGAAGGGGACAGGATTGTCTGCTGCCTCCAAGTCATGGGAGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR CCA 90 bp GACACATGGGGCAGGAAGCCGAGGCTATGCTTTCTGAGGTGTCGCTaGCAGCAGCAGCCCTGTCCTTCCCAAGTTCTGCTTCAAAGCTGC +
Preference number: 1 (lower is better)
Translates to: DTWGRKPRLCFLRCR*QQQPCPSQVLLQSC
Trigger: GCAGCTTTGAAGCAGAACTTGGGAAGGACAGGGCTGCTGCTGCCAGCGACACCTCAGAAAGCATAGCCTCGGCTTCCTGCCCCATGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR TCA 90 bp AAATGGCTTGTGTCAGGTCAGGTCCCTCAGGTGCACTTGGCAGGCTaGCCCGTCTGTAACCCACCATCTGCTGGCCTCTGGAAGCAGAGT +
Preference number: 1 (lower is better)
Translates to: KWLVSGQVPQVHLAG*PVCNPPSAGLWKQS
Trigger: ACTCTGCTTCCAGAGGCCAGCAGATGGTGGGTTACAGACGGGTCAGCCTGCCAAGTGCACCTGAGGGACCTGACCTGACACAAGCCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR TCA 90 bp CAAGGGTGGAAGAGACTGTGGTTCCCCAAAGCTTCCCAGTGCACTTaGGGGTTCACACTCTCCCACCACATGGTAGCACCTTGCCTGGGC +
Preference number: 1 (lower is better)
Translates to: QGWKRLWFPKASQCT*GFTLSHHMVAPCLG
Trigger: GCCCAGGCAAGGTGCTACCATGTGGTGGGAGAGTGTGAACCCTCAAGTGCACTGGGAAGCTTTGGGGAACCACAGTCTCTTCCACCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR TCA 90 bp TTCCATAGTGCAGAGACACTCCCTGCTACCAAGAAAAGGTGTCCGTaGGCCCATCCTGACAGACGAGATGCGCTGAGGCCTGTCTCCTGC +
Preference number: 1 (lower is better)
Translates to: FHSAETLPATKKRCP*AHPDRRDALRPVSC
Trigger: GCAGGAGACAGGCCTCAGCGCATCTCGTCTGTCAGGATGGGCTCACGGACACCTTTTCTTGGTAGCAGGGAGTGTCTCTGCACTATGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR TCA 90 bp GGGGTTCAGGCCCAGCACTACTCACTAGCTGTCACTTGGTCTTTCTaGGCCGCATTTCTGTTACGTAGGTGGAGGCCCCTTCCCATAGGA +
Preference number: 1 (lower is better)
Translates to: GVQAQHYSLAVTWSF*AAFLLRRWRPLPIG
Trigger: TCCTATGGGAAGGGGCCTCCACCTACGTAACAGAAATGCGGCTCAGAAAGACCAAGTGACAGCTAGTGAGTAGTGCTGGGCCTGAACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR GCA 90 bp CGACAGATGGATCTCAGGGCAGGGAGGAAGAGTCAGACCCACCTGTaGTTGTCTCACCGTGTGGGTCAGTTTCTTCATCTGCAACATGGC +
Preference number: 1 (lower is better)
Translates to: RQMDLRAGRKSQTHL*LSHRVGQFLHLQHG
Trigger: GCCATGTTGCAGATGAAGAAACTGACCCACACGGTGAGACAAGCACAGGTGGGTCTGACTCTTCCTCCCTGCCCTGAGATCCATCTGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR CCA 90 bp CCTTGCTCCCCTCCTCAACACTATTGCCTGGGCTGGTACAAGAGATaGAGAGCAGCCAAAACAAAGCAGTTGGTCCAGCCTCCAGGTTGG +
Preference number: 1 (lower is better)
Translates to: PCSPPQHYCLGWYKR*RAAKTKQLVQPPGW
Trigger: CCAACCTGGAGGCTGGACCAACTGCTTTGTTTTGGCTGCTCTCCATCTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGGGGAGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR CCA 90 bp GGGAAGTCCAGAGGGTGCAGAATTCTTCAGTGGGGAAAGAGGATCTaGAGCAGGTCTCTGGATCCCTTAGAAGCAAGGGGCTGTGGGACT +
Preference number: 1 (lower is better)
Translates to: GKSRGCRILQWGKRI*SRSLDPLEARGCGT
Trigger: AGTCCCACAGCCCCTTGCTTCTAAGGGATCCAGAGACCTGCTCCAGATCCTCTTTCCCCACTGAAGAATTCTGCACCCTCTGGACTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR CCA 90 bp GGCATCCTACCCTTCAGAGGGAGGCTCCTTTCCTGTTGCTGTTTCTaGTTCCAAGACGCCTTCCCCAGGACCATGAGTTCAAGGAGGGTT +
Preference number: 1 (lower is better)
Translates to: GILPFRGRLLSCCCF*FQDAFPRTMSSRRV
Trigger: AACCCTCCTTGAACTCATGGTCCTGGGGAAGGCGTCTTGGAACCAGAAACAGCAACAGGAAAGGAGCCTCCCTCTGAAGGGTAGGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR TCA 90 bp GGAACCAGGTCTACTCTGGCTTGGGGAGTGATTCAGAGAAGGCTTTaGATGCCCCTTACTTTCCTCCCAAGGAGCTCTTCTGCCTGCCTC +
Preference number: 1 (lower is better)
Translates to: GTRSTLAWGVIQRRL*MPLTFLPRSSSACL
Trigger: GAGGCAGGCAGAAGAGCTCCTTGGGAGGAAAGTAAGGGGCATTCAAAGCCTTCTCTGAATCACTCCCCAAGCCAGAGTAGACCTGGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR GCA 90 bp TCCCTGTTTCCTCTTCCGTTTCAAGACCATTGGGGGAAACGGTCTTaGCCTTCCTCTGCCGTAGCCTTCCTCAGTAGAACACACCACCTG +
Preference number: 1 (lower is better)
Translates to: SLFPLPFQDHWGKRS*PSSAVAFLSRTHHL
Trigger: CAGGTGGTGTGTTCTACTGAGGAAGGCTACGGCAGAGGAAGGGCAAGACCGTTTCCCCCAATGGTCTTGAAACGGAAGAGGAAACAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR GCA 90 bp AATCTTGAGTTCCTAATGAGTCTGACCTGGAGTAGGCTAGACCAGTaGAAATACTCCAGGCGTGCAGAGCGGGGAGGCCAAGGGCAGTGT +
Preference number: 1 (lower is better)
Translates to: NLEFLMSLTWSRLDQ*KYSRRAERGGQGQC
Trigger: ACACTGCCCTTGGCCTCCCCGCTCTGCACGCCTGGAGTATTTGCACTGGTCTAGCCTACTCCAGGTCAGACTCATTAGGAACTCAAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR CCA 90 bp TCTAGGCCTGTTTACTCGTGTGTTAACCGGGTCATGGAGAGGAGCTaGACAAGCTGCTCTCTGCCATCCCCTCTAGCACCATTTGGTGAC +
Preference number: 1 (lower is better)
Translates to: SRPVYSCVNRVMERS*TSCSLPSPLAPFGD
Trigger: GTCACCAAATGGTGCTAGAGGGGATGGCAGAGAGCAGCTTGTCCAGCTCCTCTCCATGACCCGGTTAACACACGAGTAAACAGGCCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR CCA 90 bp AGGGTTCACACTCTCCCACCACATGGTAGCACCTTGCCTGGGCAGTaGATCCTTCACCTCTGCCCTCACCTCTTCCTTATTGTGATGGTT +
Preference number: 1 (lower is better)
Translates to: RVHTLPPHGSTLPGQ*ILHLCPHLFLIVMV
Trigger: AACCATCACAATAAGGAAGAGGTGAGGGCAGAGGTGAAGGATCCACTGCCCAGGCAAGGTGCTACCATGTGGTGGGAGAGTGTGAACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR GCA 90 bp CATCTACTCTGTGCCAGGTACAGCGCTAGACTTTTTCACAAGCACTaGCTTATCCTCCCAGCAACCTCAGGAAGAGGGCATTGCCACCTA +
Preference number: 1 (lower is better)
Translates to: HLLCARYSARLFHKH*LILPATSGRGHCHL
Trigger: TAGGTGGCAATGCCCTCTTCCTGAGGTTGCTGGGAGGATAAGGCAGTGCTTGTGAAAAAGTCTAGCGCTGTACCTGGCACAGAGTAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR GCA 90 bp GTTTACTCGTGTGTTAACCGGGTCATGGAGAGGAGCTGGACAAGCTaGTCTCTGCCATCCCCTCTAGCACCATTTGGTGACTTAACTTGG +
Preference number: 1 (lower is better)
Translates to: VYSCVNRVMERSWTS*SLPSPLAPFGDLTW
Trigger: CCAAGTTAAGTCACCAAATGGTGCTAGAGGGGATGGCAGAGAGCAGCTTGTCCAGCTCCTCTCCATGACCCGGTTAACACACGAGTAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR CCA 90 bp GGGCAGGGAGGAAGAGTCAGACCCACCTGTGCTTGTCTCACCGTGTaGGTCAGTTTCTTCATCTGCAACATGGCTTATGTTGGAATCCAT +
Preference number: 1 (lower is better)
Translates to: GQGGRVRPTCACLTV*VSFFICNMAYVGIH
Trigger: ATGGATTCCAACATAAGCCATGTTGCAGATGAAGAAACTGACCCACACGGTGAGACAAGCACAGGTGGGTCTGACTCTTCCTCCCTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR TCA 90 bp TTTCCTGTTGCTGTTTCTGGTTCCAAGACGCCTTCCCCAGGACCATaGGTTCAAGGAGGGTTCAGGCATAATACAGGCAACTCCCAATCC +
Preference number: 1 (lower is better)
Translates to: FPVAVSGSKTPSPGP*VQGGFRHNTGNSQS
Trigger: GGATTGGGAGTTGCCTGTATTATGCCTGAACCCTCCTTGAACTCATGGTCCTGGGGAAGGCGTCTTGGAACCAGAAACAGCAACAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR TCA 90 bp TGCCCAGGTAACCCTTTCATATACACTGACCCCTTTCTTCCTTGCTaGAGACCTCGGCTAGCTCTGTCATCTTCATTTTGTAGATGCAGC +
Preference number: 1 (lower is better)
Translates to: CPGNPFIYTDPFLPC*RPRLALSSSFCRCS
Trigger: GCTGCATCTACAAAATGAAGATGACAGAGCTAGCCGAGGTCTTCAGCAAGGAAGAAAGGGGTCAGTGTATATGAAAGGGTTACCTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR GCA 90 bp AGACCCACCTGTGCTTGTCTCACCGTGTGGGTCAGTTTCTTCATCTaGAACATGGCTTATGTTGGAATCCATGGCTGTACAAAGTTCTTC +
Preference number: 1 (lower is better)
Translates to: RPTCACLTVWVSFFI*NMAYVGIHGCTKFF
Trigger: GAAGAACTTTGTACAGCCATGGATTCCAACATAAGCCATGTTGCAGATGAAGAAACTGACCCACACGGTGAGACAAGCACAGGTGGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR GCA 90 bp CCTCAGCTCTGTGCTTGTCTCACCGTGTGGGTCAGTTTCTTCATCTaGAACATGGCTTATGTTGGAATCCATGGCTGTACAAAGTTCTTC +
Preference number: 1 (lower is better)
Translates to: PQLCACLTVWVSFFI*NMAYVGIHGCTKFF
Trigger: GAAGAACTTTGTACAGCCATGGATTCCAACATAAGCCATGTTGCAGATGAAGAAACTGACCCACACGGTGAGACAAGCACAGAGCTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636034.1
3UTR CCA 90 bp CCTGTGCTTGTCTCACCGTGTGGGTCAGTTTCTTCATCTGCAACATaGCTTATGTTGGAATCCATGGCTGTACAAAGTTCTTCCAGTTCC +
Preference number: 1 (lower is better)
Translates to: PVLVSPCGSVSSSAT*LMLESMAVQSSSSS
Trigger: GGAACTGGAAGAACTTTGTACAGCCATGGATTCCAACATAAGCCATGTTGCAGATGAAGAAACTGACCCACACGGTGAGACAAGCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR CCA 90 bp TCTGTGCTTGTCTCACCGTGTGGGTCAGTTTCTTCATCTGCAACATaGCTTATGTTGGAATCCATGGCTGTACAAAGTTCTTCCAGTTCC +
Preference number: 1 (lower is better)
Translates to: SVLVSPCGSVSSSAT*LMLESMAVQSSSSS
Trigger: GGAACTGGAAGAACTTTGTACAGCCATGGATTCCAACATAAGCCATGTTGCAGATGAAGAAACTGACCCACACGGTGAGACAAGCACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636034.1
3UTR TCA 90 bp AAGCCCATGAACTTGGACTTCTCACAGATTTCAAGTATTTGGACCTaGGACTCCAAGCAGGTCACCCAAAGATTCAGAACTCAGAAGCTC +
Preference number: 1 (lower is better)
Translates to: KPMNLDFSQISSIWT*DSKQVTQRFRTQKL
Trigger: GAGCTTCTGAGTTCTGAATCTTTGGGTGACCTGCTTGGAGTCTCAGGTCCAAATACTTGAAATCTGTGAGAAGTCCAAGTTCATGGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR CCA 90 bp TCTCACCGTGTGGGTCAGTTTCTTCATCTGCAACATGGCTTATGTTaGAATCCATGGCTGTACAAAGTTCTTCCAGTTCCAAAAGCCCAT +
Preference number: 1 (lower is better)
Translates to: SHRVGQFLHLQHGLC*NPWLYKVLPVPKAH
Trigger: ATGGGCTTTTGGAACTGGAAGAACTTTGTACAGCCATGGATTCCAACATAAGCCATGTTGCAGATGAAGAAACTGACCCACACGGTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR CCA 90 bp GTGGGTCAGTTTCTTCATCTGCAACATGGCTTATGTTGGAATCCATaGCTGTACAAAGTTCTTCCAGTTCCAAAAGCCCATGAACTTGGA +
Preference number: 1 (lower is better)
Translates to: VGQFLHLQHGLCWNP*LYKVLPVPKAHELG
Trigger: TCCAAGTTCATGGGCTTTTGGAACTGGAAGAACTTTGTACAGCCATGGATTCCAACATAAGCCATGTTGCAGATGAAGAAACTGACCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR TCA 90 bp TTGGAATCCATGGCTGTACAAAGTTCTTCCAGTTCCAAAAGCCCATaGACTTGGACTTCTCACAGATTTCAAGTATTTGGACCTGAGACT +
Preference number: 1 (lower is better)
Translates to: LESMAVQSSSSSKSP*TWTSHRFQVFGPET
Trigger: AGTCTCAGGTCCAAATACTTGAAATCTGTGAGAAGTCCAAGTTCATGGGCTTTTGGAACTGGAAGAACTTTGTACAGCCATGGATTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR-3UTR CCA 90 bp GTGGGGCCCACCCAGTCCAGCTGCTGTCCACTCAAGCAGCGGCAGGTGTCAGGTGCTGCTGTGTGTGGATaGAGGCGTGGGGGAGGAGGG +
Preference number: 2 (lower is better)
Translates to: VGPTQSSCCPLKQRQVSGAAVCG*RRGGGG
Trigger: CCCTCCTCCCCCACGCCTCCATCCACACACAGCAGC...ACCTGACACCTGCCGCTGCTTGAGTGGACAGCAGCTGGACTGGGTGGGCCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR-3UTR GCA 90 bp GGGCCCACCCAGTCCAGCTGCTGTCCACTCAAGCAGCGGCAGGTGTCAGGTCACCACCCAACACTACTGTaGAGCAGAGGGTGGCAGGGT +
Preference number: 2 (lower is better)
Translates to: GPTQSSCCPLKQRQVSGHHPTLL*SRGWQG
Trigger: ACCCTGCCACCCTCTGCTGCACAGTAGTGTTGGGTG...GTGACCTGACACCTGCCGCTGCTTGAGTGGACAGCAGCTGGACTGGGTGGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR-3UTR CCA 90 bp ACTTGGCAGGAATCGCTGACCACTGTGGGGCCCACCCAGTCCAGCTGCTGTCCAGTGTGGATGGAGGCGTaGGGGAGGAGGGACTCCAGA +
Preference number: 2 (lower is better)
Translates to: TWQESLTTVGPTQSSCCPVWMEA*GRRDSR
Trigger: TCTGGAGTCCCTCCTCCCCCACGCCTCCATCCACAC...TGGACAGCAGCTGGACTGGGTGGGCCCCACAGTGGTCAGCGATTCCTGCCAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR CAA 90 bp CGCTGTCTAGTCAAGGTCGGTGAATGGGAGTCTGGCCAGCACTGGTaGGGCGGGGAGGGATGGTATGACACCTGCCTGACTCTGCCCGGA +
Preference number: 2 (lower is better)
Translates to: RCLVKVGEWESGQHW*GGEGWYDTCLTLPG
Trigger: TCCGGGCAGAGTCAGGCAGGTGTCATACCATCCCTCCCCGCCCAACCAGTGCTGGCCAGACTCCCATTCACCGACCTTGACTAGACAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR-3UTR GCA 90 bp GACGACACACGACCCAAGGGTGGAAGAGACTGTGGTTCCCCAAAGCTTCCCAGTAGCCACAGCAGCAGCTaGTGGGGCCTCGGGGTAGCC +
Preference number: 2 (lower is better)
Translates to: DDTRPKGGRDCGSPKLPSSHSSS*WGLGVA
Trigger: GGCTACCCCGAGGCCCCAGCAGCTGCTGCTGTGGCT...ACTGGGAAGCTTTGGGGAACCACAGTCTCTTCCACCCTTGGGTCGTGTGTCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR-3UTR CCA 90 bp GCTGACCACTGTGGGGCCCACCCAGTCCAGCTGCTGTCCACTCAAGCAGCGGCAGATGAAGCAAAAGGATaGATCTGTGGGGGCAGCGCC +
Preference number: 2 (lower is better)
Translates to: ADHCGAHPVQLLSTQAAADEAKG*ICGGSA
Trigger: GGCGCTGCCCCCACAGATCCATCCTTTTGCTTCATC...TGCCGCTGCTTGAGTGGACAGCAGCTGGACTGGGTGGGCCCCACAGTGGTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR-3UTR TCA 90 bp TCTGCCTGCCTCAGCGGCTATAGCAAGAGTGTGGACTTTGGGGTTCAGGCCCAGGGAGGGAGGCTGGCATaGCAGTCAGGGGACCCCATT +
Preference number: 2 (lower is better)
Translates to: SACLSGYSKSVDFGVQAQGGRLA*QSGDPI
Trigger: AATGGGGTCCCCTGACTGTCATGCCAGCCTCCCTCC...CTGGGCCTGAACCCCAAAGTCCACACTCTTGCTATAGCCGCTGAGGCAGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR-3UTR GCA 90 bp CTGGGCACCCGATTCTCTGCAGAGATAGCCCCACCACGGGAAGGAGGCATAGGGCCCAATCCGCTCATCTaGTGGCCTCTGGAAGCAGAG +
Preference number: 2 (lower is better)
Translates to: LGTRFSAEIAPPREGGIGPNPLI*WPLEAE
Trigger: CTCTGCTTCCAGAGGCCAGCAGATGAGCGGATTGGG...CCCTATGCCTCCTTCCCGTGGTGGGGCTATCTCTGCAGAGAATCGGGTGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636034.1
3UTR-3UTR CCA 90 bp TCAGAGCTACCATTGTGTCAGGCCAGCCCGGTGCGGTGTGAGCTCCTGCCCTTCGTCCAGCCTCCAGGTTaGAGCTGCTGTGTGTGGATG +
Preference number: 2 (lower is better)
Translates to: SELPLCQASPVRCELLPFVQPPG*SCCVWM
Trigger: CATCCACACACAGCAGCTCCAACCTGGAGGCTGGAC...GAAGGGCAGGAGCTCACACCGCACCGGGCTGGCCTGACACAATGGTAGCTCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR-3UTR TCA 90 bp CTGTGGGGCCCACCCAGTCCAGCTGCTGTCCACTCAAGCAGCGGCAGGTGTCAGAGGAGGGACTCCAGATaGAGCAAAAGGATGGATCTG +
Preference number: 2 (lower is better)
Translates to: LWGPPSPAAVHSSSGRCQRRDSR*SKRMDL
Trigger: CAGATCCATCCTTTTGCTTCATCTGGAGTCCCTCCT...CTGACACCTGCCGCTGCTTGAGTGGACAGCAGCTGGACTGGGTGGGCCCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR-3UTR CCA 90 bp CTGGGCACCCGATTCTCTGCAGAGATAGCCCCACCACGGGAAGGAGGCATAGGGGATGAAGCAAAAGGATaGATCTGTGGGGGCAGCGCC +
Preference number: 2 (lower is better)
Translates to: LGTRFSAEIAPPREGGIGDEAKG*ICGGSA
Trigger: GGCGCTGCCCCCACAGATCCATCCTTTTGCTTCATC...CCCTATGCCTCCTTCCCGTGGTGGGGCTATCTCTGCAGAGAATCGGGTGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR-3UTR CCA 90 bp GACGACACACGACCCAAGGGTGGAAGAGACTGTGGTTCCCCAAAGCTTCCCAGTGTGTGGATGGAGGCGTaGGGGAGGAGGGACTCCAGA +
Preference number: 2 (lower is better)
Translates to: DDTRPKGGRDCGSPKLPSVWMEA*GRRDSR
Trigger: TCTGGAGTCCCTCCTCCCCCACGCCTCCATCCACAC...ACTGGGAAGCTTTGGGGAACCACAGTCTCTTCCACCCTTGGGTCGTGTGTCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR-3UTR CCA 90 bp GCTGACCACTGTGGGGCCCACCCAGTCCAGCTGCTGTCCACTCAAGCAGCGGCACCAAAACAAAGCAGTTaGTCCAGCCTCCAGGTTGGA +
Preference number: 2 (lower is better)
Translates to: ADHCGAHPVQLLSTQAAAPKQSS*SSLQVG
Trigger: TCCAACCTGGAGGCTGGACCAACTGCTTTGTTTTGG...TGCCGCTGCTTGAGTGGACAGCAGCTGGACTGGGTGGGCCCCACAGTGGTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR-3UTR CCA 90 bp CTACCATTGTGTCAGGCCAGCCCGGTGCGGTGTGAGCTCCTGCCCTTCCACCCCTCTTCTCCCATGACTTaGAGGCAGCAGACAATCCTG +
Preference number: 2 (lower is better)
Translates to: LPLCQASPVRCELLPFHPSSPMT*RQQTIL
Trigger: CAGGATTGTCTGCTGCCTCCAAGTCATGGGAGAAGA...GGGGTGGAAGGGCAGGAGCTCACACCGCACCGGGCTGGCCTGACACAATGGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR CAA 90 bp GCCTCAGGCCGGCATCCTACCCTTCAGAGGGAGGCTCCTTTCCTGTaGCTGTTTCTGGTTCCAAGACGCCTTCCCCAGGACCATGAGTTC +
Preference number: 2 (lower is better)
Translates to: ASGRHPTLQREAPFL*LFLVPRRLPQDHEF
Trigger: GAACTCATGGTCCTGGGGAAGGCGTCTTGGAACCAGAAACAGCAACAGGAAAGGAGCCTCCCTCTGAAGGGTAGGATGCCGGCCTGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR-3UTR TCA 90 bp TCCAGATCTGGAGCTTCCTCCAGTCCTTGCCCAGCATTAAGCTGGGCACCCGATGTGCACTTGGCAGGCTaGCCCGTCTGTAACCCACCA +
Preference number: 2 (lower is better)
Translates to: SRSGASSSPCPALSWAPDVHLAG*PVCNPP
Trigger: TGGTGGGTTACAGACGGGTCAGCCTGCCAAGTGCAC...ATCGGGTGCCCAGCTTAATGCTGGGCAAGGACTGGAGGAAGCTCCAGATCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR-3UTR GCA 90 bp AGCTACCATTGTGTCAGGCCAGCCCGGTGCGGTGTGAGCTCCTGCCCTTCCACCCCTCCTCAACACTATTaGCTGGGCTGGTACAAGAGA +
Preference number: 2 (lower is better)
Translates to: SYHCVRPARCGVSSCPSTPPQHY*LGWYKR
Trigger: TCTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGG...GGTGGAAGGGCAGGAGCTCACACCGCACCGGGCTGGCCTGACACAATGGTAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR-3UTR CCA 90 bp CAGGAATCGCTGACCACTGTGGGGCCCACCCAGTCCAGCTGCTGTCCACTCAAGACTCCTCAGGGTGGATaGCTCTGCCATCTCTGTCTT +
Preference number: 2 (lower is better)
Translates to: QESLTTVGPTQSSCCPLKTPQGG*LCHLCL
Trigger: AAGACAGAGATGGCAGAGCCATCCACCCTGAGGAGT...CTTGAGTGGACAGCAGCTGGACTGGGTGGGCCCCACAGTGGTCAGCGATTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR CAA 90 bp TGCCTGGGCTGGTACAAGAGATGGAGAGCAGCCAAAACAAAGCAGTaGGTCCAGCCTCCAGGTTGGAGCTGCTGTGTGTGGATGGAGGCG +
Preference number: 2 (lower is better)
Translates to: CLGWYKRWRAAKTKQ*VQPPGWSCCVWMEA
Trigger: CGCCTCCATCCACACACAGCAGCTCCAACCTGGAGGCTGGACCAACTGCTTTGTTTTGGCTGCTCTCCATCTCTTGTACCAGCCCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR CAA 90 bp CCAAGGGTGGAAGAGACTGTGGTTCCCCAAAGCTTCCCAGTGCACTaGAGGGTTCACACTCTCCCACCACATGGTAGCACCTTGCCTGGG +
Preference number: 2 (lower is better)
Translates to: PRVEETVVPQSFPVH*RVHTLPPHGSTLPG
Trigger: CCCAGGCAAGGTGCTACCATGTGGTGGGAGAGTGTGAACCCTCAAGTGCACTGGGAAGCTTTGGGGAACCACAGTCTCTTCCACCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR-3UTR TCA 90 bp ACTGGGATACAAACAGCCCCAGGTCCCCAAACCATCCAAAGAGCCCTCCCTGTTCGAGGCTATGCTTTCTaGGGTGTCGCTGGCAGCAGC +
Preference number: 2 (lower is better)
Translates to: TGIQTAPGPQTIQRALPVRGYAF*GVAGSS
Trigger: GCTGCTGCCAGCGACACCTCAGAAAGCATAGCCTCG...AACAGGGAGGGCTCTTTGGATGGTTTGGGGACCTGGGGCTGTTTGTATCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR-3UTR GCA 90 bp TCCAGATCTGGAGCTTCCTCCAGTCCTTGCCCAGCATTAAGCTGGGCACCCGATCACCCAACACTACTGTaGAGCAGAGGGTGGCAGGGT +
Preference number: 2 (lower is better)
Translates to: SRSGASSSPCPALSWAPDHPTLL*SRGWQG
Trigger: ACCCTGCCACCCTCTGCTGCACAGTAGTGTTGGGTG...ATCGGGTGCCCAGCTTAATGCTGGGCAAGGACTGGAGGAAGCTCCAGATCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR-3UTR GCA 90 bp AGCAGCCTTGCTCCCCTCCTCAACACTATTGCCTGGGCTGGTACAAGAGATGGACCTCCAGGTTGGAGCTaGTGTGTGTGGATGGAGGCG +
Preference number: 2 (lower is better)
Translates to: SSLAPLLNTIAWAGTRDGPPGWS*CVWMEA
Trigger: CGCCTCCATCCACACACAGCAGCTCCAACCTGGAGG...TCCATCTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGGGGAGCAAGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR-3UTR GCA 90 bp TCTGCCTGCCTCAGCGGCTATAGCAAGAGTGTGGACTTTGGGGTTCAGGCCCAGCACATGGTAGCACCTTaGCTGGGCAGTGGATCCTTC +
Preference number: 2 (lower is better)
Translates to: SACLSGYSKSVDFGVQAQHMVAP*LGSGSF
Trigger: GAAGGATCCACTGCCCAGGCAAGGTGCTACCATGTG...CTGGGCCTGAACCCCAAAGTCCACACTCTTGCTATAGCCGCTGAGGCAGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR-3UTR CCA 90 bp TCAGAGCTACCATTGTGTCAGGCCAGCCCGGTGCGGTGTGAGCTCCTGCCCTTCCACTATTGCCTGGGCTaGTACAAGAGATGGAGAGCA +
Preference number: 2 (lower is better)
Translates to: SELPLCQASPVRCELLPFHYCLG*YKRWRA
Trigger: TGCTCTCCATCTCTTGTACCAGCCCAGGCAATAGTG...GAAGGGCAGGAGCTCACACCGCACCGGGCTGGCCTGACACAATGGTAGCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR-3UTR CCA 90 bp CGGGTCATGGAGAGGAGCTGGACAAGCTGCTCTCTGCCATCCCCTCTAGCACCAACTCCTCAGGGTGGATaGCTCTGCCATCTCTGTCTT +
Preference number: 2 (lower is better)
Translates to: RVMERSWTSCSLPSPLAPTPQGG*LCHLCL
Trigger: AAGACAGAGATGGCAGAGCCATCCACCCTGAGGAGT...TGGTGCTAGAGGGGATGGCAGAGAGCAGCTTGTCCAGCTCCTCTCCATGACCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR-3UTR CCA 90 bp AAGACAACGCATGCTGAGGACCTGGCGCAGAGCAGACCCTTAGTAACAGGAGCTGCTTCCAGGGACACATaGGGCAGGAAGCCGAGGCTA +
Preference number: 2 (lower is better)
Translates to: KTTHAEDLAQSRPLVTGAASRDT*GRKPRL
Trigger: TAGCCTCGGCTTCCTGCCCCATGTGTCCCTGGAAGC...AGCTCCTGTTACTAAGGGTCTGCTCTGCGCCAGGTCCTCAGCATGCGTTGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR-3UTR CCA 90 bp CGGGTCATGGAGAGGAGCTGGACAAGCTGCTCTCTGCCATCCCCTCTAGCACCATCATCTGCTGGCCTCTaGAAGCAGAGTCAGGGTACA +
Preference number: 2 (lower is better)
Translates to: RVMERSWTSCSLPSPLAPSSAGL*KQSQGT
Trigger: TGTACCCTGACTCTGCTTCCAGAGGCCAGCAGATGA...TGGTGCTAGAGGGGATGGCAGAGAGCAGCTTGTCCAGCTCCTCTCCATGACCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636034.1
3UTR-3UTR GCA 90 bp TGCCACCTCCAGATCTGGAGCTTCCTCCAGTCCTTGCCCAGCATTAAGCTGGGCTTCACCTCAGCTCTGTaGTTGTCTCACCGTGTGGGT +
Preference number: 2 (lower is better)
Translates to: CHLQIWSFLQSLPSIKLGFTSAL*LSHRVG
Trigger: ACCCACACGGTGAGACAAGCACAGAGCTGAGGTGAA...GCCCAGCTTAATGCTGGGCAAGGACTGGAGGAAGCTCCAGATCTGGAGGTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636034.1
3UTR-3UTR CCA 90 bp CAGGAATCGCTGACCACTGTGGGGCCCACCCAGTCCAGCTGCTGTCCACTCAAGGGCTGGTACAAGAGATaGAGAGCAGCCAAAACAAAG +
Preference number: 2 (lower is better)
Translates to: QESLTTVGPTQSSCCPLKGWYKR*RAAKTK
Trigger: CTTTGTTTTGGCTGCTCTCCATCTCTTGTACCAGCC...CTTGAGTGGACAGCAGCTGGACTGGGTGGGCCCCACAGTGGTCAGCGATTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR-3UTR CCA 90 bp TCCCTGTTTCCTCTTCCGTTTCAAGACCATTGGGGGAAACGGTCTTGCCCTTCCATCCTGTCCCCTTCCTaGCCCCTTGCCCATCACTCC +
Preference number: 2 (lower is better)
Translates to: SLFPLPFQDHWGKRSCPSILSPS*PLAHHS
Trigger: GGAGTGATGGGCAAGGGGCCAGGAAGGGGACAGGAT...GGAAGGGCAAGACCGTTTCCCCCAATGGTCTTGAAACGGAAGAGGAAACAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR-3UTR CCA 90 bp GCTAAACCCTACTTGGCAGGAATCGCTGACCACTGTGGGGCCCACCCAGTCCAGTCTTCTCCCATGACTTaGAGGCAGCAGACAATCCTG +
Preference number: 2 (lower is better)
Translates to: AKPYLAGIADHCGAHPVQSSPMT*RQQTIL
Trigger: CAGGATTGTCTGCTGCCTCCAAGTCATGGGAGAAGA...CTGGACTGGGTGGGCCCCACAGTGGTCAGCGATTCCTGCCAAGTAGGGTTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR CAA 90 bp CTCAGGGTGGATGGCTCTGCCATCTCTGTCTTCCACTTAGCAGCCTaGCTCCCCTCCTCAACACTATTGCCTGGGCTGGTACAAGAGATG +
Preference number: 2 (lower is better)
Translates to: LRVDGSAISVFHLAA*LPSSTLLPGLVQEM
Trigger: CATCTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGGGGAGCAAGGCTGCTAAGTGGAAGACAGAGATGGCAGAGCCATCCACCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR CAA 90 bp ATCCAGTATCTCTGCCACCTCCAGATCTGGAGCTTCCTCCAGTCCTaGCCCAGCATTAAGCTGGGCACCCGATTCTCTGCAGAGATAGCC +
Preference number: 2 (lower is better)
Translates to: IQYLCHLQIWSFLQS*PSIKLGTRFSAEIA
Trigger: GGCTATCTCTGCAGAGAATCGGGTGCCCAGCTTAATGCTGGGCAAGGACTGGAGGAAGCTCCAGATCTGGAGGTGGCAGAGATACTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR-3UTR TCA 90 bp TGCCACCTCCAGATCTGGAGCTTCCTCCAGTCCTTGCCCAGCATTAAGCTGGGCTCAAGTATTTGGACCTaGGACTCCAAGCAGGTCACC +
Preference number: 2 (lower is better)
Translates to: CHLQIWSFLQSLPSIKLGSSIWT*DSKQVT
Trigger: GGTGACCTGCTTGGAGTCTCAGGTCCAAATACTTGA...GCCCAGCTTAATGCTGGGCAAGGACTGGAGGAAGCTCCAGATCTGGAGGTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR-3UTR GCA 90 bp GGGGACAACTGGAACCAGGTCTACTCTGGCTTGGGGAGTGATTCAGAGAAGGCTAGGAAGCCGAGGCTATaGTTTCTGAGGTGTCGCTGG +
Preference number: 2 (lower is better)
Translates to: GDNWNQVYSGLGSDSEKARKPRL*FLRCRW
Trigger: CCAGCGACACCTCAGAAAGCATAGCCTCGGCTTCCT...AGCCTTCTCTGAATCACTCCCCAAGCCAGAGTAGACCTGGTTCCAGTTGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR-3UTR GCA 90 bp CGGGTCATGGAGAGGAGCTGGACAAGCTGCTCTCTGCCATCCCCTCTAGCACCATCAGGAAGAGGGCATTaGCACCTACGTTTTATAGGC +
Preference number: 2 (lower is better)
Translates to: RVMERSWTSCSLPSPLAPSGRGH*HLRFIG
Trigger: GCCTATAAAACGTAGGTGGCAATGCCCTCTTCCTGA...TGGTGCTAGAGGGGATGGCAGAGAGCAGCTTGTCCAGCTCCTCTCCATGACCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR-3UTR CCA 90 bp ACTGGGATACAAACAGCCCCAGGTCCCCAAACCATCCAAAGAGCCCTCCCTGTTAGCAGGAGTCCCAGCTaGGCTCTAGGGACAAAATGG +
Preference number: 2 (lower is better)
Translates to: TGIQTAPGPQTIQRALPVSRSPS*ALGTKW
Trigger: CCATTTTGTCCCTAGAGCCCAGCTGGGACTCCTGCT...AACAGGGAGGGCTCTTTGGATGGTTTGGGGACCTGGGGCTGTTTGTATCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR-3UTR GCA 90 bp TCCCTGTTTCCTCTTCCGTTTCAAGACCATTGGGGGAAACGGTCTTGCCCTTCCAGTCAGACCCACCTGTaGTTGTCTCACCGTGTGGGT +
Preference number: 2 (lower is better)
Translates to: SLFPLPFQDHWGKRSCPSSQTHL*LSHRVG
Trigger: ACCCACACGGTGAGACAAGCACAGGTGGGTCTGACT...GGAAGGGCAAGACCGTTTCCCCCAATGGTCTTGAAACGGAAGAGGAAACAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR-3UTR GCA 90 bp CTTCTGCCTGCCTCAGCGGCTATAGCAAGAGTGTGGACTTTGGGGTTCAGGCCCGTTCTGCTTCAAAGCTaGTCAGGTTTGGTTGGGAAG +
Preference number: 2 (lower is better)
Translates to: LLPASAAIARVWTLGFRPVLLQS*SGLVGK
Trigger: CTTCCCAACCAAACCTGAGCAGCTTTGAAGCAGAAC...GGGCCTGAACCCCAAAGTCCACACTCTTGCTATAGCCGCTGAGGCAGGCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR-3UTR GCA 90 bp TACTCTGGCTTGGGGAGTGATTCAGAGAAGGCTTTGAATGCCCCTTACTTTCCTCCTCCAGGTTGGAGCTaGTGTGTGTGGATGGAGGCG +
Preference number: 2 (lower is better)
Translates to: YSGLGSDSEKALNAPYFPPPGWS*CVWMEA
Trigger: CGCCTCCATCCACACACAGCAGCTCCAACCTGGAGG...AGGAAAGTAAGGGGCATTCAAAGCCTTCTCTGAATCACTCCCCAAGCCAGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR-3UTR GCA 90 bp GTAGCCTTCCTCAGTAGAACACACCACCTGGGGGCTGCTGTGTCTTGTTTGCTTTGGTTCCCAAAGGGCTaGGTACAGAGATGGAGGGAA +
Preference number: 2 (lower is better)
Translates to: VAFLSRTHHLGAAVSCLLWFPKG*VQRWRE
Trigger: TTCCCTCCATCTCTGTACGCAGCCCTTTGGGAACCA...AAGCAAACAAGACACAGCAGCCCCCAGGTGGTGTGTTCTACTGAGGAAGGCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR-3UTR CCA 90 bp CCCTCCCTGTTTCCTCTTCCGTTTCAAGACCATTGGGGGAAACGGTCTTGCCCTGCTTGTCTCACCGTGTaGGTCAGTTTCTTCATCTGC +
Preference number: 2 (lower is better)
Translates to: PSLFPLPFQDHWGKRSCPACLTV*VSFFIC
Trigger: GCAGATGAAGAAACTGACCCACACGGTGAGACAAGC...AGGGCAAGACCGTTTCCCCCAATGGTCTTGAAACGGAAGAGGAAACAGGGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR-3UTR TCA 90 bp CCTCCCTGTTTCCTCTTCCGTTTCAAGACCATTGGGGGAAACGGTCTTGCCCTTTCAAGTATTTGGACCTaGGACTCCAAGCAGGTCACC +
Preference number: 2 (lower is better)
Translates to: PPCFLFRFKTIGGNGLALSSIWT*DSKQVT
Trigger: GGTGACCTGCTTGGAGTCTCAGGTCCAAATACTTGA...AAGGGCAAGACCGTTTCCCCCAATGGTCTTGAAACGGAAGAGGAAACAGGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR-3UTR GCA 90 bp ACCCGATTCTCTGCAGAGATAGCCCCACCACGGGAAGGAGGCATAGGGGCTTCCGTCAGTTTCTTCATCTaGAACATGGCTTATGTTGGA +
Preference number: 2 (lower is better)
Translates to: TRFSAEIAPPREGGIGASVSFFI*NMAYVG
Trigger: TCCAACATAAGCCATGTTGCAGATGAAGAAACTGAC...GGAAGCCCCTATGCCTCCTTCCCGTGGTGGGGCTATCTCTGCAGAGAATCGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR-3UTR CCA 90 bp ATCAAGAGAAGAGGACGACACACGACCCAAGGGTGGAAGAGACTGTGGTTCCCCCTCAACACTATTGCCTaGGCTGGTACAAGAGATGGA +
Preference number: 2 (lower is better)
Translates to: IKRRGRHTTQGWKRLWFPLNTIA*AGTRDG
Trigger: TCCATCTCTTGTACCAGCCCAGGCAATAGTGTTGAG...GGGGAACCACAGTCTCTTCCACCCTTGGGTCGTGTGTCGTCCTCTTCTCTTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR-3UTR CCA 90 bp CACTGCAACGCCACCTGTCAAAAGCAGAGAGCCTGTGCATGCCTTCTTTTCAGACGGCTAAACCCTACTTaGCAGGAATCGCTGACCACT +
Preference number: 2 (lower is better)
Translates to: HCNATCQKQRACACLLFRRLNPT*QESLTT
Trigger: AGTGGTCAGCGATTCCTGCCAAGTAGGGTTTAGCCG...TCTGAAAAGAAGGCATGCACAGGCTCTCTGCTTTTGACAGGTGGCGTTGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR-3UTR CCA 90 bp CTTCTGCCTGCCTCAGCGGCTATAGCAAGAGTGTGGACTTTGGGGTTCAGGCCCTCTTCATCTGCAACATaGCTTATGTTGGAATCCATG +
Preference number: 2 (lower is better)
Translates to: LLPASAAIARVWTLGFRPSSSAT*LMLESM
Trigger: CATGGATTCCAACATAAGCCATGTTGCAGATGAAGA...GGGCCTGAACCCCAAAGTCCACACTCTTGCTATAGCCGCTGAGGCAGGCAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR-3UTR CCA 90 bp CACTGCAACGCCACCTGTCAAAAGCAGAGAGCCTGTGCATGCCTTCTTTTCAGAGCTTGTCTCACCGTGTaGGTCAGTTTCTTCATCTGC +
Preference number: 2 (lower is better)
Translates to: HCNATCQKQRACACLLFRACLTV*VSFFIC
Trigger: GCAGATGAAGAAACTGACCCACACGGTGAGACAAGC...TCTGAAAAGAAGGCATGCACAGGCTCTCTGCTTTTGACAGGTGGCGTTGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR-3UTR TCA 90 bp AACAGCAGACAAGCTCTAGGCCTGTTTACTCGTGTGTTAACCGGGTCATGGAGAAGGAGGGACTCCAGATaGAGCAAAAGGATGGATCTG +
Preference number: 2 (lower is better)
Translates to: NSRQALGLFTRVLTGSWRRRDSR*SKRMDL
Trigger: CAGATCCATCCTTTTGCTTCATCTGGAGTCCCTCCT...TCTCCATGACCCGGTTAACACACGAGTAAACAGGCCTAGAGCTTGTCTGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR-3UTR GCA 90 bp CGACCCAAGGGTGGAAGAGACTGTGGTTCCCCAAAGCTTCCCAGTGCACTTGAGGTCAGTTTCTTCATCTaGAACATGGCTTATGTTGGA +
Preference number: 2 (lower is better)
Translates to: RPKGGRDCGSPKLPSALEVSFFI*NMAYVG
Trigger: TCCAACATAAGCCATGTTGCAGATGAAGAAACTGAC...CTCAAGTGCACTGGGAAGCTTTGGGGAACCACAGTCTCTTCCACCCTTGGGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR-3UTR CCA 90 bp TGCAACGCCACCTGTCAAAAGCAGAGAGCCTGTGCATGCCTTCTTTTCAGACAACCAAAACAAAGCAGTTaGTCCAGCCTCCAGGTTGGA +
Preference number: 2 (lower is better)
Translates to: CNATCQKQRACACLLFRQPKQSS*SSLQVG
Trigger: TCCAACCTGGAGGCTGGACCAACTGCTTTGTTTTGG...TTGTCTGAAAAGAAGGCATGCACAGGCTCTCTGCTTTTGACAGGTGGCGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR-3UTR CCA 90 bp ATCAAGAGAAGAGGACGACACACGACCCAAGGGTGGAAGAGACTGTGGTTCCCCTTTGGTGACTTAACTTaGACAACAGCCATGTATGGG +
Preference number: 2 (lower is better)
Translates to: IKRRGRHTTQGWKRLWFPFGDLT*TTAMYG
Trigger: CCCATACATGGCTGTTGTCCAAGTTAAGTCACCAAA...GGGGAACCACAGTCTCTTCCACCCTTGGGTCGTGTGTCGTCCTCTTCTCTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR-3UTR CCA 90 bp ATAGTTCTCAGATCACCTGTGGCCTTGCCATCTCTGATGGAGATAGTCTCAACCAATCCGCTCATCTGCTaGCCTCTGGAAGCAGAGTCA +
Preference number: 2 (lower is better)
Translates to: IVLRSPVALPSLMEIVSTNPLIC*PLEAES
Trigger: TGACTCTGCTTCCAGAGGCCAGCAGATGAGCGGATT...GGTTGAGACTATCTCCATCAGAGATGGCAAGGCCACAGGTGATCTGAGAACTAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636034.1
3UTR-3UTR CCA 90 bp AGGCATAGGGGCTTCCCTGACATCAAGAGAAGAGGACGACACACGACCCAAGGGTTATGTTGGAATCCATaGCTGTACAAAGTTCTTCCA +
Preference number: 2 (lower is better)
Translates to: RHRGFPDIKRRGRHTTQGLCWNP*LYKVLP
Trigger: TGGAAGAACTTTGTACAGCCATGGATTCCAACATAA...CCCTTGGGTCGTGTGTCGTCCTCTTCTCTTGATGTCAGGGAAGCCCCTATGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR-3UTR TCA 90 bp CTTGCCATCTCTGATGGAGATAGTCTCAACCTGTTTCCTCACTTCCCCTCCCAAAGTTCCAAAAGCCCATaGACTTGGACTTCTCACAGA +
Preference number: 2 (lower is better)
Translates to: LAISDGDSLNLFPHFPSQSSKSP*TWTSHR
Trigger: TCTGTGAGAAGTCCAAGTTCATGGGCTTTTGGAACT...TTGGGAGGGGAAGTGAGGAAACAGGTTGAGACTATCTCCATCAGAGATGGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR-3UTR TCA 90 bp TCAAACAGCAGACAAGCTCTAGGCCTGTTTACTCGTGTGTTAACCGGGTCATGGTCTAGCACCATTTGGTaGCTTAACTTGGACAACAGC +
Preference number: 2 (lower is better)
Translates to: SNSRQALGLFTRVLTGSWSSTIW*LNLDNS
Trigger: GCTGTTGTCCAAGTTAAGTCACCAAATGGTGCTAGA...CCATGACCCGGTTAACACACGAGTAAACAGGCCTAGAGCTTGTCTGCTGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR-3UTR CCA 90 bp TACTCTGGCTTGGGGAGTGATTCAGAGAAGGCTTTGAATGCCCCTTACTTTCCTGGCTGGTACAAGAGATaGAGAGCAGCCAAAACAAAG +
Preference number: 2 (lower is better)
Translates to: YSGLGSDSEKALNAPYFPGWYKR*RAAKTK
Trigger: CTTTGTTTTGGCTGCTCTCCATCTCTTGTACCAGCC...AGGAAAGTAAGGGGCATTCAAAGCCTTCTCTGAATCACTCCCCAAGCCAGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR-3UTR CCA 90 bp ATCAAGAGAAGAGGACGACACACGACCCAAGGGTGGAAGAGACTGTGGTTCCCCTTATGTTGGAATCCATaGCTGTACAAAGTTCTTCCA +
Preference number: 2 (lower is better)
Translates to: IKRRGRHTTQGWKRLWFPLCWNP*LYKVLP
Trigger: TGGAAGAACTTTGTACAGCCATGGATTCCAACATAA...GGGGAACCACAGTCTCTTCCACCCTTGGGTCGTGTGTCGTCCTCTTCTCTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR CAA 90 bp GTCTCACCGTGTGGGTCAGTTTCTTCATCTGCAACATGGCTTATGTaGGAATCCATGGCTGTACAAAGTTCTTCCAGTTCCAAAAGCCCA +
Preference number: 2 (lower is better)
Translates to: VSPCGSVSSSATWLM*ESMAVQSSSSSKSP
Trigger: TGGGCTTTTGGAACTGGAAGAACTTTGTACAGCCATGGATTCCAACATAAGCCATGTTGCAGATGAAGAAACTGACCCACACGGTGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR-3UTR CCA 90 bp GAGGACCTGGCGCAGAGCAGACCCTTAGTAACAGGAGCTAATACTGGGATACAATCTTCATCTGCAACATaGCTTATGTTGGAATCCATG +
Preference number: 2 (lower is better)
Translates to: EDLAQSRPLVTGANTGIQSSSAT*LMLESM
Trigger: CATGGATTCCAACATAAGCCATGTTGCAGATGAAGA...TTGTATCCCAGTATTAGCTCCTGTTACTAAGGGTCTGCTCTGCGCCAGGTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR CAA 90 bp GTTCCAAAAGCCCATGAACTTGGACTTCTCACAGATTTCAAGTATTaGGACCTGAGACTCCAAGCAGGTCACCCAAAGATTCAGAACTCA +
Preference number: 2 (lower is better)
Translates to: VPKAHELGLLTDFKY*DLRLQAGHPKIQNS
Trigger: TGAGTTCTGAATCTTTGGGTGACCTGCTTGGAGTCTCAGGTCCAAATACTTGAAATCTGTGAGAAGTCCAAGTTCATGGGCTTTTGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR CAA 90 bp ATGCCTTCTTTTCAGACAAAAATAGTTCTCAGATCACCTGTGGCCTaGCCATCTCTGATGGAGATAGTCTCAACCTGTTTCCTCACTTCC +
Preference number: 2 (lower is better)
Translates to: MPSFQTKIVLRSPVA*PSLMEIVSTCFLTS
Trigger: GGAAGTGAGGAAACAGGTTGAGACTATCTCCATCAGAGATGGCAAGGCCACAGGTGATCTGAGAACTATTTTTGTCTGAAAAGAAGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR TCA 72 bp GGGACACATGGGGCAGGAAGCCGAGGCTATGCTTTCTaGGGTGTCGCTGGCAGCAGCAGCCCTGTCCTTCCC +
Preference number: 3 (lower is better)
Translates to: GTHGAGSRGYAF*GVAGSSSPVLP
Trigger: GGGAAGGACAGGGCTGCTGCTGCCAGCGACACCTCAGAAAGCATAGCCTCGGCTTCCTGCCCCATGTGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR GCA 72 bp GAATCGCTGACCACTGTGGGGCCCACCCAGTCCAGCTaGTGTCCACTCAAGCAGCGGCAGGTGTCAGGTCAC +
Preference number: 3 (lower is better)
Translates to: ESLTTVGPTQSS*CPLKQRQVSGH
Trigger: GTGACCTGACACCTGCCGCTGCTTGAGTGGACAGCAGCTGGACTGGGTGGGCCCCACAGTGGTCAGCGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR-3UTR CAA 90 bp CAGGAATCGCTGACCACTGTGGGGCCCACCCAGTCCAGCTGCTGTCCACTCAAGGGTCCAGCCTCCAGGTaGGAGCTGCTGTGTGTGGAT +
Preference number: 3 (lower is better)
Translates to: QESLTTVGPTQSSCCPLKGPASR*ELLCVD
Trigger: ATCCACACACAGCAGCTCCAACCTGGAGGCTGGACC...CTTGAGTGGACAGCAGCTGGACTGGGTGGGCCCCACAGTGGTCAGCGATTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR-3UTR CAA 90 bp TGTGGGGCCCACCCAGTCCAGCTGCTGTCCACTCAAGCAGCGGCAGGTGTCAGGGCCAAAACAAAGCAGTaGGTCCAGCCTCCAGGTTGG +
Preference number: 3 (lower is better)
Translates to: CGAHPVQLLSTQAAAGVRAKTKQ*VQPPGW
Trigger: CCAACCTGGAGGCTGGACCAACTGCTTTGTTTTGGC...CCTGACACCTGCCGCTGCTTGAGTGGACAGCAGCTGGACTGGGTGGGCCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR TCA 72 bp GTGTCAGGTCAGGTCCCTCAGGTGCACTTGGCAGGCTaGCCCGTCTGTAACCCACCATCTGCTGGCCTCTGG +
Preference number: 3 (lower is better)
Translates to: VSGQVPQVHLAG*PVCNPPSAGLW
Trigger: CCAGAGGCCAGCAGATGGTGGGTTACAGACGGGTCAGCCTGCCAAGTGCACCTGAGGGACCTGACCTGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR GCA 72 bp GAGGCAGCAGACAATCCTGTCCCCTTCCTGGCCCCTTaGCCATCACTCCTCAGGGTGGATGGCTCTGCCATC +
Preference number: 3 (lower is better)
Translates to: EAADNPVPFLAP*PSLLRVDGSAI
Trigger: GATGGCAGAGCCATCCACCCTGAGGAGTGATGGGCAAGGGGCCAGGAAGGGGACAGGATTGTCTGCTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR GCA 72 bp CAGGACTTGAATCCAGACTCGGGGGTCCCTGTCCCATaGTCTGTGCCTGTGCTGTGTCTCCTCCCTCTGCCC +
Preference number: 3 (lower is better)
Translates to: QDLNPDSGVPVP*SVPVLCLLPLP
Trigger: GGGCAGAGGGAGGAGACACAGCACAGGCACAGAGCATGGGACAGGGACCCCCGAGTCTGGATTCAAGTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR CCA 72 bp TGGGAGTCTGGCCAGCACTGGTTGGGCGGGGAGGGATaGTATGACACCTGCCTGACTCTGCCCGGAAACAAG +
Preference number: 3 (lower is better)
Translates to: WESGQHWLGGEG*YDTCLTLPGNK
Trigger: CTTGTTTCCGGGCAGAGTCAGGCAGGTGTCATACCATCCCTCCCCGCCCAACCAGTGCTGGCCAGACTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR-3UTR CAA 90 bp CAGGAATCGCTGACCACTGTGGGGCCCACCCAGTCCAGCTGCTGTCCACTCAAGCTGCCCTTCCACCCCTaGTCCTATACCCCTCTTCTC +
Preference number: 3 (lower is better)
Translates to: QESLTTVGPTQSSCCPLKLPFHP*SYTPLL
Trigger: GAGAAGAGGGGTATAGGACAAGGGGTGGAAGGGCAG...CTTGAGTGGACAGCAGCTGGACTGGGTGGGCCCCACAGTGGTCAGCGATTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR-3UTR CAA 90 bp GCTAAACCCTACTTGGCAGGAATCGCTGACCACTGTGGGGCCCACCCAGTCCAGCCTTCAGAGCTACCATaGTGTCAGGCCAGCCCGGTG +
Preference number: 3 (lower is better)
Translates to: AKPYLAGIADHCGAHPVQPSELP*CQASPV
Trigger: CACCGGGCTGGCCTGACACAATGGTAGCTCTGAAGG...CTGGACTGGGTGGGCCCCACAGTGGTCAGCGATTCCTGCCAAGTAGGGTTTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR CCA 72 bp TGCAGAGAGAAGCCTGCCCACCCGCTAGACTCCCTCTaGTGTTCCTGTAATGTTCCTCCCAGCTCCCCCAGC +
Preference number: 3 (lower is better)
Translates to: CREKPAHPLDSL*CSCNVPPSSPS
Trigger: GCTGGGGGAGCTGGGAGGAACATTACAGGAACACCAGAGGGAGTCTAGCGGGTGGGCAGGCTTCTCTCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR CCA 72 bp CTAGTCAAGGTCGGTGAATGGGAGTCTGGCCAGCACTaGTTGGGCGGGGAGGGATGGTATGACACCTGCCTG +
Preference number: 3 (lower is better)
Translates to: LVKVGEWESGQH*LGGEGWYDTCL
Trigger: CAGGCAGGTGTCATACCATCCCTCCCCGCCCAACCAGTGCTGGCCAGACTCCCATTCACCGACCTTGACTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR TCA 72 bp CCCTGCTACCAAGAAAAGGTGTCCGTGAGCCCATCCTaGCAGACGAGATGCGCTGAGGCCTGTCTCCTGCAG +
Preference number: 3 (lower is better)
Translates to: PCYQEKVSVSPS*QTRCAEACLLQ
Trigger: CTGCAGGAGACAGGCCTCAGCGCATCTCGTCTGTCAGGATGGGCTCACGGACACCTTTTCTTGGTAGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR GCA 72 bp CATCCTGACAGACGAGATGCGCTGAGGCCTGTCTCCTaGAGCCACTGGCTTCCTGTCCCAGTGATAGGCTTC +
Preference number: 3 (lower is better)
Translates to: HPDRRDALRPVS*SHWLPVPVIGF
Trigger: GAAGCCTATCACTGGGACAGGAAGCCAGTGGCTGCAGGAGACAGGCCTCAGCGCATCTCGTCTGTCAGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR CCA 72 bp ATGACTTGGAGGCAGCAGACAATCCTGTCCCCTTCCTaGCCCCTTGCCCATCACTCCTCAGGGTGGATGGCT +
Preference number: 3 (lower is better)
Translates to: MTWRQQTILSPS*PLAHHSSGWMA
Trigger: AGCCATCCACCCTGAGGAGTGATGGGCAAGGGGCCAGGAAGGGGACAGGATTGTCTGCTGCCTCCAAGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR CCA 72 bp GGCAGGAAGCCGAGGCTATGCTTTCTGAGGTGTCGCTaGCAGCAGCAGCCCTGTCCTTCCCAAGTTCTGCTT +
Preference number: 3 (lower is better)
Translates to: GRKPRLCFLRCR*QQQPCPSQVLL
Trigger: AAGCAGAACTTGGGAAGGACAGGGCTGCTGCTGCCAGCGACACCTCAGAAAGCATAGCCTCGGCTTCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR-3UTR CAA 90 bp CTTCTGCCTGCCTCAGCGGCTATAGCAAGAGTGTGGACTTTGGGGTTCAGGCCCCCCTCCTCAACACTATaGCCTGGGCTGGTACAAGAG +
Preference number: 3 (lower is better)
Translates to: LLPASAAIARVWTLGFRPPSSTL*PGLVQE
Trigger: CTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGGG...GGGCCTGAACCCCAAAGTCCACACTCTTGCTATAGCCGCTGAGGCAGGCAGAAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR-3UTR CAA 90 bp CGGGTCATGGAGAGGAGCTGGACAAGCTGCTCTCTGCCATCCCCTCTAGCACCATTCCACTTAGCAGCCTaGCTCCCCTCCTCAACACTA +
Preference number: 3 (lower is better)
Translates to: RVMERSWTSCSLPSPLAPFHLAA*LPSSTL
Trigger: TAGTGTTGAGGAGGGGAGCAAGGCTGCTAAGTGGAA...TGGTGCTAGAGGGGATGGCAGAGAGCAGCTTGTCCAGCTCCTCTCCATGACCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR TCA 72 bp GCAGAGACACTCCCTGCTACCAAGAAAAGGTGTCCGTaGGCCCATCCTGACAGACGAGATGCGCTGAGGCCT +
Preference number: 3 (lower is better)
Translates to: AETLPATKKRCP*AHPDRRDALRP
Trigger: AGGCCTCAGCGCATCTCGTCTGTCAGGATGGGCTCACGGACACCTTTTCTTGGTAGCAGGGAGTGTCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR TCA 72 bp CTAAAAGGTGGCTGTTCGCTGTCTAGTCAAGGTCGGTaGATGGGAGTCTGGCCAGCACTGGTTGGGCGGGGA +
Preference number: 3 (lower is better)
Translates to: LKGGCSLSSQGR*MGVWPALVGRG
Trigger: TCCCCGCCCAACCAGTGCTGGCCAGACTCCCATTCACCGACCTTGACTAGACAGCGAACAGCCACCTTTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR CCA 72 bp AATGGCTTGTGTCAGGTCAGGTCCCTCAGGTGCACTTaGCAGGCTGACCCGTCTGTAACCCACCATCTGCTG +
Preference number: 3 (lower is better)
Translates to: NGLCQVRSLRCT*QADPSVTHHLL
Trigger: CAGCAGATGGTGGGTTACAGACGGGTCAGCCTGCCAAGTGCACCTGAGGGACCTGACCTGACACAAGCCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR-3UTR CAA 90 bp ATAGTGCAGAGACACTCCCTGCTACCAAGAAAAGGTGTCCGTGAGCCCATCCTGGGTCCAGCCTCCAGGTaGGAGCTGCTGTGTGTGGAT +
Preference number: 3 (lower is better)
Translates to: IVQRHSLLPRKGVREPILGPASR*ELLCVD
Trigger: ATCCACACACAGCAGCTCCAACCTGGAGGCTGGACC...CAGGATGGGCTCACGGACACCTTTTCTTGGTAGCAGGGAGTGTCTCTGCACTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR TCA 72 bp GGGCAGTGTGGGGAAGATGGGGGCATCGAGGGTGGCTaGGTGAGTGTCCTAATGATTCCTAGACCTACAGTC +
Preference number: 3 (lower is better)
Translates to: GQCGEDGGIEGG*VSVLMIPRPTV
Trigger: GACTGTAGGTCTAGGAATCATTAGGACACTCACTCAGCCACCCTCGATGCCCCCATCTTCCCCACACTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR GCA 72 bp GTAGCTCACTCGTCCATCCTCCACCCAACACTACTGTaGAGCAGAGGGTGGCAGGGTGAAAGAGCATGGAGA +
Preference number: 3 (lower is better)
Translates to: VAHSSILHPTLL*SRGWQGERAWR
Trigger: TCTCCATGCTCTTTCACCCTGCCACCCTCTGCTGCACAGTAGTGTTGGGTGGAGGATGGACGAGTGAGCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR GCA 72 bp GGACAAAATGGCTTGTGTCAGGTCAGGTCCCTCAGGTaGACTTGGCAGGCTGACCCGTCTGTAACCCACCAT +
Preference number: 3 (lower is better)
Translates to: GQNGLCQVRSLR*TWQADPSVTHH
Trigger: ATGGTGGGTTACAGACGGGTCAGCCTGCCAAGTGCACCTGAGGGACCTGACCTGACACAAGCCATTTTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR CCA 72 bp GCTCTAGGCCTGTTTACTCGTGTGTTAACCGGGTCATaGAGAGGAGCTGGACAAGCTGCTCTCTGCCATCCC +
Preference number: 3 (lower is better)
Translates to: ALGLFTRVLTGS*RGAGQAALCHP
Trigger: GGGATGGCAGAGAGCAGCTTGTCCAGCTCCTCTCCATGACCCGGTTAACACACGAGTAAACAGGCCTAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR GCA 72 bp GATCTCAGGGCAGGGAGGAAGAGTCAGACCCACCTGTaGTTGTCTCACCGTGTGGGTCAGTTTCTTCATCTG +
Preference number: 3 (lower is better)
Translates to: DLRAGRKSQTHL*LSHRVGQFLHL
Trigger: CAGATGAAGAAACTGACCCACACGGTGAGACAAGCACAGGTGGGTCTGACTCTTCCTCCCTGCCCTGAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR GCA 72 bp CCCAAACCCTTGCTCCAGGTTTCCATCCAGTATCTCTaGCACCTCCAGATCTGGAGCTTCCTCCAGTCCTTG +
Preference number: 3 (lower is better)
Translates to: PKPLLQVSIQYL*HLQIWSFLQSL
Trigger: CAAGGACTGGAGGAAGCTCCAGATCTGGAGGTGGCAGAGATACTGGATGGAAACCTGGAGCAAGGGTTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR GCA 72 bp TTCCTAATGAGTCTGACCTGGAGTAGGCTAGACCAGTaGAAATACTCCAGGCGTGCAGAGCGGGGAGGCCAA +
Preference number: 3 (lower is better)
Translates to: FLMSLTWSRLDQ*KYSRRAERGGQ
Trigger: TTGGCCTCCCCGCTCTGCACGCCTGGAGTATTTGCACTGGTCTAGCCTACTCCAGGTCAGACTCATTAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR TCA 72 bp GCCCAGCACTACTCACTAGCTGTCACTTGGTCTTTCTaGGCCGCATTTCTGTTACGTAGGTGGAGGCCCCTT +
Preference number: 3 (lower is better)
Translates to: AQHYSLAVTWSF*AAFLLRRWRPL
Trigger: AAGGGGCCTCCACCTACGTAACAGAAATGCGGCTCAGAAAGACCAAGTGACAGCTAGTGAGTAGTGCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR GCA 72 bp GGTAGCACCTTGCCTGGGCAGTGGATCCTTCACCTCTaGCCTCACCTCTTCCTTATTGTGATGGTTCCCAAA +
Preference number: 3 (lower is better)
Translates to: GSTLPGQWILHL*PHLFLIVMVPK
Trigger: TTTGGGAACCATCACAATAAGGAAGAGGTGAGGGCAGAGGTGAAGGATCCACTGCCCAGGCAAGGTGCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR GCA 72 bp CCTCTTCCGTTTCAAGACCATTGGGGGAAACGGTCTTaGCCTTCCTCTGCCGTAGCCTTCCTCAGTAGAACA +
Preference number: 3 (lower is better)
Translates to: PLPFQDHWGKRS*PSSAVAFLSRT
Trigger: TGTTCTACTGAGGAAGGCTACGGCAGAGGAAGGGCAAGACCGTTTCCCCCAATGGTCTTGAAACGGAAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR CCA 72 bp GGTACAAGAGATGGAGAGCAGCCAAAACAAAGCAGTTaGTCCAGCCTCCAGGTTGGAGCTGCTGTGTGTGGA +
Preference number: 3 (lower is better)
Translates to: GTRDGEQPKQSS*SSLQVGAAVCG
Trigger: TCCACACACAGCAGCTCCAACCTGGAGGCTGGACCAACTGCTTTGTTTTGGCTGCTCTCCATCTCTTGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR CCA 72 bp CAGCCTTGCTCCCCTCCTCAACACTATTGCCTGGGCTaGTACAAGAGATGGAGAGCAGCCAAAACAAAGCAG +
Preference number: 3 (lower is better)
Translates to: QPCSPPQHYCLG*YKRWRAAKTKQ
Trigger: CTGCTTTGTTTTGGCTGCTCTCCATCTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGGGGAGCAAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR-3UTR CAA 90 bp ACCCGATTCTCTGCAGAGATAGCCCCACCACGGGAAGGAGGCATAGGGGCTTCCACAGATTTCAAGTATTaGGACCTGAGACTCCAAGCA +
Preference number: 3 (lower is better)
Translates to: TRFSAEIAPPREGGIGASTDFKY*DLRLQA
Trigger: TGCTTGGAGTCTCAGGTCCAAATACTTGAAATCTGT...GGAAGCCCCTATGCCTCCTTCCCGTGGTGGGGCTATCTCTGCAGAGAATCGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR TCA 72 bp CATAGGATTGTCACGCGGAATAAAGACAACGCATGCTaGGGACCTGGCGCAGAGCAGACCCTTAGTAACAGG +
Preference number: 3 (lower is better)
Translates to: HRIVTRNKDNAC*GPGAEQTLSNR
Trigger: CCTGTTACTAAGGGTCTGCTCTGCGCCAGGTCCTCAGCATGCGTTGTCTTTATTCCGCGTGACAATCCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR GCA 72 bp TGCCTTATCCTCCCAGCAACCTCAGGAAGAGGGCATTaGCACCTACGTTTTATAGGCAAGGAAGCTGAGCTC +
Preference number: 3 (lower is better)
Translates to: CLILPATSGRGH*HLRFIGKEAEL
Trigger: GAGCTCAGCTTCCTTGCCTATAAAACGTAGGTGGCAATGCCCTCTTCCTGAGGTTGCTGGGAGGATAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR GCA 72 bp TGTGCCAGGTACAGCGCTAGACTTTTTCACAAGCACTaGCTTATCCTCCCAGCAACCTCAGGAAGAGGGCAT +
Preference number: 3 (lower is better)
Translates to: CARYSARLFHKH*LILPATSGRGH
Trigger: ATGCCCTCTTCCTGAGGTTGCTGGGAGGATAAGGCAGTGCTTGTGAAAAAGTCTAGCGCTGTACCTGGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR GCA 72 bp GATGTAGCAGGGTTCCAGCTGTTCACCTCAGCTCTGTaGTTGTCTCACCGTGTGGGTCAGTTTCTTCATCTG +
Preference number: 3 (lower is better)
Translates to: DVAGFQLFTSAL*LSHRVGQFLHL
Trigger: CAGATGAAGAAACTGACCCACACGGTGAGACAAGCACAGAGCTGAGGTGAACAGCTGGAACCCTGCTACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636034.1
3UTR CCA 72 bp CCTCCTCAACACTATTGCCTGGGCTGGTACAAGAGATaGAGAGCAGCCAAAACAAAGCAGTTGGTCCAGCCT +
Preference number: 3 (lower is better)
Translates to: PPQHYCLGWYKR*RAAKTKQLVQP
Trigger: AGGCTGGACCAACTGCTTTGTTTTGGCTGCTCTCCATCTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR CCA 72 bp CTTAGCAGCCTTGCTCCCCTCCTCAACACTATTGCCTaGGCTGGTACAAGAGATGGAGAGCAGCCAAAACAA +
Preference number: 3 (lower is better)
Translates to: LSSLAPLLNTIA*AGTRDGEQPKQ
Trigger: TTGTTTTGGCTGCTCTCCATCTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGGGGAGCAAGGCTGCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
3UTR-3UTR CAA 90 bp TACTCTGGCTTGGGGAGTGATTCAGAGAAGGCTTTGAATGCCCCTTACTTTCCTCCGGCTAAACCCTACTaGGCAGGAATCGCTGACCAC +
Preference number: 3 (lower is better)
Translates to: YSGLGSDSEKALNAPYFPPAKPY*AGIADH
Trigger: GTGGTCAGCGATTCCTGCCAAGTAGGGTTTAGCCGG...AGGAAAGTAAGGGGCATTCAAAGCCTTCTCTGAATCACTCCCCAAGCCAGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR-3UTR CAA 90 bp AGGCATAGGGGCTTCCCTGACATCAAGAGAAGAGGACGACACACGACCCAAGGGCAAAAGCCCATGAACTaGGACTTCTCACAGATTTCA +
Preference number: 3 (lower is better)
Translates to: RHRGFPDIKRRGRHTTQGQKPMN*DFSQIS
Trigger: TGAAATCTGTGAGAAGTCCAAGTTCATGGGCTTTTG...CCCTTGGGTCGTGTGTCGTCCTCTTCTCTTGATGTCAGGGAAGCCCCTATGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR TCA 72 bp CGTGGCTATCACACTGACCGCCTGGACCTGTTGGGATaGATACTAAAAGGTGGCTGTTCGCTGTCTAGTCAA +
Preference number: 3 (lower is better)
Translates to: RGYHTDRLDLLG*ILKGGCSLSSQ
Trigger: TTGACTAGACAGCGAACAGCCACCTTTTAGTATTCATCCCAACAGGTCCAGGCGGTCAGTGTGATAGCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR TCA 72 bp ACCTACAGTCCCTTAGGAACTGCGTGGCTATCACACTaGCCGCCTGGACCTGTTGGGATGAATACTAAAAGG +
Preference number: 3 (lower is better)
Translates to: TYSPLGTAWLSH*PPGPVGMNTKR
Trigger: CCTTTTAGTATTCATCCCAACAGGTCCAGGCGGTCAGTGTGATAGCCACGCAGTTCCTAAGGGACTGTAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR-3UTR CAA 90 bp TCAAACAGCAGACAAGCTCTAGGCCTGTTTACTCGTGTGTTAACCGGGTCATGGGAGGCTCCTTTCCTGTaGCTGTTTCTGGTTCCAAGA +
Preference number: 3 (lower is better)
Translates to: SNSRQALGLFTRVLTGSWEAPFL*LFLVPR
Trigger: TCTTGGAACCAGAAACAGCAACAGGAAAGGAGCCTC...CCATGACCCGGTTAACACACGAGTAAACAGGCCTAGAGCTTGTCTGCTGTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR TCA 72 bp TCTACTCTGGCTTGGGGAGTGATTCAGAGAAGGCTTTaGATGCCCCTTACTTTCCTCCCAAGGAGCTCTTCT +
Preference number: 3 (lower is better)
Translates to: STLAWGVIQRRL*MPLTFLPRSSS
Trigger: AGAAGAGCTCCTTGGGAGGAAAGTAAGGGGCATTCAAAGCCTTCTCTGAATCACTCCCCAAGCCAGAGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR CCA 72 bp GGAAGAGTCAGACCCACCTGTGCTTGTCTCACCGTGTaGGTCAGTTTCTTCATCTGCAACATGGCTTATGTT +
Preference number: 3 (lower is better)
Translates to: GRVRPTCACLTV*VSFFICNMAYV
Trigger: AACATAAGCCATGTTGCAGATGAAGAAACTGACCCACACGGTGAGACAAGCACAGGTGGGTCTGACTCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR CCA 72 bp AGCTGTTCACCTCAGCTCTGTGCTTGTCTCACCGTGTaGGTCAGTTTCTTCATCTGCAACATGGCTTATGTT +
Preference number: 3 (lower is better)
Translates to: SCSPQLCACLTV*VSFFICNMAYV
Trigger: AACATAAGCCATGTTGCAGATGAAGAAACTGACCCACACGGTGAGACAAGCACAGAGCTGAGGTGAACAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636034.1
3UTR TCA 72 bp AAGCTGCTCTCTGCCATCCCCTCTAGCACCATTTGGTaGCTTAACTTGGACAACAGCCATGTATGGGAAATA +
Preference number: 3 (lower is better)
Translates to: KLLSAIPSSTIW*LNLDNSHVWEI
Trigger: TATTTCCCATACATGGCTGTTGTCCAAGTTAAGTCACCAAATGGTGCTAGAGGGGATGGCAGAGAGCAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR GCA 72 bp TGTGCTTGTCTCACCGTGTGGGTCAGTTTCTTCATCTaGAACATGGCTTATGTTGGAATCCATGGCTGTACA +
Preference number: 3 (lower is better)
Translates to: CACLTVWVSFFI*NMAYVGIHGCT
Trigger: TGTACAGCCATGGATTCCAACATAAGCCATGTTGCAGATGAAGAAACTGACCCACACGGTGAGACAAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR-3UTR CAA 90 bp TACTCTGGCTTGGGGAGTGATTCAGAGAAGGCTTTGAATGCCCCTTACTTTCCTCAAAAGCCCATGAACTaGGACTTCTCACAGATTTCA +
Preference number: 3 (lower is better)
Translates to: YSGLGSDSEKALNAPYFPQKPMN*DFSQIS
Trigger: TGAAATCTGTGAGAAGTCCAAGTTCATGGGCTTTTG...AGGAAAGTAAGGGGCATTCAAAGCCTTCTCTGAATCACTCCCCAAGCCAGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR CCA 72 bp GTCTCACCGTGTGGGTCAGTTTCTTCATCTGCAACATaGCTTATGTTGGAATCCATGGCTGTACAAAGTTCT +
Preference number: 3 (lower is better)
Translates to: VSPCGSVSSSAT*LMLESMAVQSS
Trigger: AGAACTTTGTACAGCCATGGATTCCAACATAAGCCATGTTGCAGATGAAGAAACTGACCCACACGGTGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR CCA 72 bp GTGGGTCAGTTTCTTCATCTGCAACATGGCTTATGTTaGAATCCATGGCTGTACAAAGTTCTTCCAGTTCCA +
Preference number: 3 (lower is better)
Translates to: VGQFLHLQHGLC*NPWLYKVLPVP
Trigger: TGGAACTGGAAGAACTTTGTACAGCCATGGATTCCAACATAAGCCATGTTGCAGATGAAGAAACTGACCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR CCA 72 bp TTTCTTCATCTGCAACATGGCTTATGTTGGAATCCATaGCTGTACAAAGTTCTTCCAGTTCCAAAAGCCCAT +
Preference number: 3 (lower is better)
Translates to: FLHLQHGLCWNP*LYKVLPVPKAH
Trigger: ATGGGCTTTTGGAACTGGAAGAACTTTGTACAGCCATGGATTCCAACATAAGCCATGTTGCAGATGAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR TCA 90 bp GGGCCCACCCAGTCCAGCTGCTGTCCACTCAAGCAGCGGCAGGTGTCAGGTCACCAGCCCGGTGCGGTGTaGGCTCCTGCCCTTCCACCC +
Preference number: 4 (lower is better)
Translates to: GPTQSSCCPLKQRQVSGHQPGAV*APALPP
Trigger: GGGTGGAAGGGCAGGAGCTCACACCGCACCGGGCTG...GTGACCTGACACCTGCCGCTGCTTGAGTGGACAGCAGCTGGACTGGGTGGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR GCA 90 bp GGGGGCAGCGCCCCTCTTCCTGGTAGCTCACTCGTCCATCCTCCACCCAACACTCGTCGGGGTTCTCGTTaGGCCGGCCCGGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: GGSAPLPGSSLVHPPPNTRRGSR*AGPAAP
Trigger: TGGCGCTGCCGGGCCGGCGCAACGAGAACCCCGACG...AGTGTTGGGTGGAGGATGGACGAGTGAGCTACCAGGAAGAGGGGCGCTGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR GCA 90 bp ACTTGGCAGGAATCGCTGACCACTGTGGGGCCCACCCAGTCCAGCTGCTGTCCAGCCCCGGCCAACCCCTaGACCGACGCGCGGTTGACG +
Preference number: 4 (lower is better)
Translates to: TWQESLTTVGPTQSSCCPAPANP*TDARLT
Trigger: CGTCAACCGCGCGTCGGTGCAGGGGTTGGCCGGGGC...TGGACAGCAGCTGGACTGGGTGGGCCCCACAGTGGTCAGCGATTCCTGCCAAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR GCA 90 bp GGATGGATCTGTGGGGGCAGCGCCCCTCTTCCTGGTAGCTCACTCGTCCATCCTGGGGCCCGCCACTGGTaGAGGCTCAGCCCCGAAGGC +
Preference number: 4 (lower is better)
Translates to: GWICGGSAPLPGSSLVHPGARHW*RLSPEG
Trigger: GCCTTCGGGGCTGAGCCTGCACCAGTGGCGGGCCCC...AGGATGGACGAGTGAGCTACCAGGAAGAGGGGCGCTGCCCCCACAGATCCATCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp TCAGAGCTACCATTGTGTCAGGCCAGCCCGGTGCGGTGTGAGCTCCTGCCCTTCCGCCGCGGTGGTTCCTaGGCCTCAGGGAGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: SELPLCQASPVRCELLPFRRGGS*ASGSRL
Trigger: CAGCCGGCTCCCTGAGGCCCAGGAACCACCGCGGCG...GAAGGGCAGGAGCTCACACCGCACCGGGCTGGCCTGACACAATGGTAGCTCTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR TCA 90 bp GGATGGATCTGTGGGGGCAGCGCCCCTCTTCCTGGTAGCTCACTCGTCCATCCTCAGCCCGGTGCGGTGTaGGCTCCTGCCCTTCCACCC +
Preference number: 4 (lower is better)
Translates to: GWICGGSAPLPGSSLVHPQPGAV*APALPP
Trigger: GGGTGGAAGGGCAGGAGCTCACACCGCACCGGGCTG...AGGATGGACGAGTGAGCTACCAGGAAGAGGGGCGCTGCCCCCACAGATCCATCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR GCA 90 bp CTGGCCCCTTGCCCATCACTCCTCAGGGTGGATGGCTCTGCCATCTCTGTCTTCCGCAGCGCCGGGCCATaGCGCGGGCATAGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: LAPCPSLLRVDGSAISVFRSAGP*RGHSSL
Trigger: CAGCGAGCTATGCCCGCGGCATGGCCCGGCGCTGCG...GAAGACAGAGATGGCAGAGCCATCCACCCTGAGGAGTGATGGGCAAGGGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR TCA 90 bp GGGGGCAGCGCCCCTCTTCCTGGTAGCTCACTCGTCCATCCTCCACCCAACACTCTTGGCAGGAATCGCTaGCCACTGTGGGGCCCACCC +
Preference number: 4 (lower is better)
Translates to: GGSAPLPGSSLVHPPPNTLGRNR*PLWGPP
Trigger: GGGTGGGCCCCACAGTGGTCAGCGATTCCTGCCAAG...AGTGTTGGGTGGAGGATGGACGAGTGAGCTACCAGGAAGAGGGGCGCTGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR TCA 90 bp CTACCATTGTGTCAGGCCAGCCCGGTGCGGTGTGAGCTCCTGCCCTTCCACCCCTGTGTCAGGAGGTGCTaGCCCAGAAGGGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LPLCQASPVRCELLPFHPCVRRC*PRREAG
Trigger: CCCTGCCTCCCTTCTGGGTCAGCACCTCCTGACACA...GGGGTGGAAGGGCAGGAGCTCACACCGCACCGGGCTGGCCTGACACAATGGTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp GCTGACCACTGTGGGGCCCACCCAGTCCAGCTGCTGTCCACTCAAGCAGCGGCAGCTCCGCATGTGGTCTaGGATGAAGCGCACGCCGTC +
Preference number: 4 (lower is better)
Translates to: ADHCGAHPVQLLSTQAAAAPHVV*DEAHAV
Trigger: GACGGCGTGCGCTTCATCGCAGACCACATGCGGAGC...TGCCGCTGCTTGAGTGGACAGCAGCTGGACTGGGTGGGCCCCACAGTGGTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp CGGGTCATGGAGAGGAGCTGGACAAGCTGCTCTCTGCCATCCCCTCTAGCACCAGAAGCCGCGCCCGCCTaGAGCTGGGTCCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RVMERSWTSCSLPSPLAPEAAPA*SWVQVV
Trigger: CACCACCTGGACCCAGCTCCAGGCGGGCGCGGCTTC...TGGTGCTAGAGGGGATGGCAGAGAGCAGCTTGTCCAGCTCCTCTCCATGACCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR TCA 90 bp TGCCACCTCCAGATCTGGAGCTTCCTCCAGTCCTTGCCCAGCATTAAGCTGGGCCGTACCCCACACCCCTaGGCACAGCCGGAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: CHLQIWSFLQSLPSIKLGRTPHP*AQPEEA
Trigger: GGCCTCCTCCGGCTGTGCTCAGGGGTGTGGGGTACG...GCCCAGCTTAATGCTGGGCAAGGACTGGAGGAAGCTCCAGATCTGGAGGTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp CCTCTTCCTGGTAGCTCACTCGTCCATCCTCCACCCAACACTACTGTGCAGCAGGCTGGGTCCAGGTGGTaGCGGCCGCCGCGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: PLPGSSLVHPPPNTTVQQAGSRW*RPPRWF
Trigger: GAACCACCGCGGCGGCCGGCACCACCTGGACCCAGC...CTGCTGCACAGTAGTGTTGGGTGGAGGATGGACGAGTGAGCTACCAGGAAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR GCA 90 bp CCATGGGGCCCGGCTAAACCCTACTTGGCAGGAATCGCTGACCACTGTGGGGCCCCCTTCCTGGCCCCTTaGCCATCACTCCTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: PWGPAKPYLAGIADHCGAPFLAP*PSLLRV
Trigger: CACCCTGAGGAGTGATGGGCAAGGGGCCAGGAAGGG...GGCCCCACAGTGGTCAGCGATTCCTGCCAAGTAGGGTTTAGCCGGGCCCCATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR GCA 90 bp GCCAAGAGGGAGGGCCTCAGGCCGGCATCCTACCCTTCAGAGGGAGGCTCCTTTCCCACCCAGTCCAGCTaGTGTCCACTCAAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: AKREGLRPASYPSEGGSFPTQSS*CPLKQR
Trigger: CCGCTGCTTGAGTGGACAGCAGCTGGACTGGGTGGG...AAAGGAGCCTCCCTCTGAAGGGTAGGATGCCGGCCTGAGGCCCTCCCTCTTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp CCTCTTCCTGGTAGCTCACTCGTCCATCCTCCACCCAACACTACTGTGCAGCAGTGCCGGCCGCCGCGGTaGTTCCTGGGCCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PLPGSSLVHPPPNTTVQQCRPPR*FLGLRE
Trigger: CTCCCTGAGGCCCAGGAACCACCGCGGCGGCCGGCA...CTGCTGCACAGTAGTGTTGGGTGGAGGATGGACGAGTGAGCTACCAGGAAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp CTGGCCCCTTGCCCATCACTCCTCAGGGTGGATGGCTCTGCCATCTCTGTCTTCTCACCCAGGGCGCCATaGTGTGCGTGGTGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: LAPCPSLLRVDGSAISVFSPRAP*CAWWAS
Trigger: GCTCGCCCACCACGCACACCATGGCGCCCTGGGTGA...GAAGACAGAGATGGCAGAGCCATCCACCCTGAGGAGTGATGGGCAAGGGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp CTGTGGGGCCCACCCAGTCCAGCTGCTGTCCACTCAAGCAGCGGCAGGTGTCAGGAGCTGGGGGCTGAGTaGTCTGAGTGGAGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: LWGPPSPAAVHSSSGRCQELGAE*SEWRKV
Trigger: CACCTTCCTCCACTCAGACCACTCAGCCCCCAGCTC...CTGACACCTGCCGCTGCTTGAGTGGACAGCAGCTGGACTGGGTGGGCCCCACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp CCATGGGGCCCGGCTAAACCCTACTTGGCAGGAATCGCTGACCACTGTGGGGCCTGTATTCGCCAACGCTaGCCCCCACGGGCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: PWGPAKPYLAGIADHCGACIRQR*PPRALS
Trigger: GGAGAGAGCCCGTGGGGGCCAGCGTTGGCGAATACA...GGCCCCACAGTGGTCAGCGATTCCTGCCAAGTAGGGTTTAGCCGGGCCCCATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR TCA 90 bp AGGCCTCTCTCTTCCCCTCCCTTCAGAGCTACCATTGTGTCAGGCCAGCCCGGTGCACCGACGCGCGGTTaGCGAAGCACGTGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: RPLSSPPFRATIVSGQPGAPTRG*RSTCRS
Trigger: ACTCCTGCACGTGCTTCGTCAACCGCGCGTCGGTGC...ACCGGGCTGGCCTGACACAATGGTAGCTCTGAAGGGAGGGGAAGAGAGAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR TCA 90 bp CTGGCCCCTTGCCCATCACTCCTCAGGGTGGATGGCTCTGCCATCTCTGTCTTCGCATGTGGTCTGCGATaGAGCGCACGCCGTCCACCG +
Preference number: 4 (lower is better)
Translates to: LAPCPSLLRVDGSAISVFACGLR*SARRPP
Trigger: CGGTGGACGGCGTGCGCTTCATCGCAGACCACATGC...GAAGACAGAGATGGCAGAGCCATCCACCCTGAGGAGTGATGGGCAAGGGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR TCA 90 bp CTACCATTGTGTCAGGCCAGCCCGGTGCGGTGTGAGCTCCTGCCCTTCCACCCCGGTATGACACCTGCCTaGCTCTGCCCGGAAACAAGG +
Preference number: 4 (lower is better)
Translates to: LPLCQASPVRCELLPFHPGMTPA*LCPETR
Trigger: CCTTGTTTCCGGGCAGAGTCAGGCAGGTGTCATACC...GGGGTGGAAGGGCAGGAGCTCACACCGCACCGGGCTGGCCTGACACAATGGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp GATGGAGAGCAGCCAAAACAAAGCAGTTGGTCCAGCCTCCAGGTTGGAGCTGCTGCTGGGTCCAGGTGGTaGCGGCCGCCGCGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: DGEQPKQSSWSSLQVGAAAGSRW*RPPRWF
Trigger: GAACCACCGCGGCGGCCGGCACCACCTGGACCCAGC...AGCAGCTCCAACCTGGAGGCTGGACCAACTGCTTTGTTTTGGCTGCTCTCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR GCA 90 bp GCCACCTCCAGATCTGGAGCTTCCTCCAGTCCTTGCCCAGCATTAAGCTGGGCAGCGGGCATAGCTCGCTaGCTCGCCTACACCGGCTGG +
Preference number: 4 (lower is better)
Translates to: ATSRSGASSSPCPALSWAAGIAR*LAYTGW
Trigger: CCAGCCGGTGTAGGCGAGGCAGCGAGCTATGCCCGC...TGCCCAGCTTAATGCTGGGCAAGGACTGGAGGAAGCTCCAGATCTGGAGGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp GATGGAGAGCAGCCAAAACAAAGCAGTTGGTCCAGCCTCCAGGTTGGAGCTGCTCGCAGCGCCGGGCCATaGCGCGGGCATAGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: DGEQPKQSSWSSLQVGAARSAGP*RGHSSL
Trigger: CAGCGAGCTATGCCCGCGGCATGGCCCGGCGCTGCG...AGCAGCTCCAACCTGGAGGCTGGACCAACTGCTTTGTTTTGGCTGCTCTCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR GCA 90 bp CCCTCCCTGTTTCCTCTTCCGTTTCAAGACCATTGGGGGAAACGGTCTTGCCCTGGGGCCCGCCACTGGTaGAGGCTCAGCCCCGAAGGC +
Preference number: 4 (lower is better)
Translates to: PSLFPLPFQDHWGKRSCPGARHW*RLSPEG
Trigger: GCCTTCGGGGCTGAGCCTGCACCAGTGGCGGGCCCC...AGGGCAAGACCGTTTCCCCCAATGGTCTTGAAACGGAAGAGGAAACAGGGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp CTGGGCACCCGATTCTCTGCAGAGATAGCCCCACCACGGGAAGGAGGCATAGGGGCTCCGCATGTGGTCTaGGATGAAGCGCACGCCGTC +
Preference number: 4 (lower is better)
Translates to: LGTRFSAEIAPPREGGIGAPHVV*DEAHAV
Trigger: GACGGCGTGCGCTTCATCGCAGACCACATGCGGAGC...CCCTATGCCTCCTTCCCGTGGTGGGGCTATCTCTGCAGAGAATCGGGTGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp GCCAAGAGGGAGGGCCTCAGGCCGGCATCCTACCCTTCAGAGGGAGGCTCCTTTCCTCCAGGTTGGAGCTaGTGTGTGTGGATGGAGGCG +
Preference number: 4 (lower is better)
Translates to: AKREGLRPASYPSEGGSFPPGWS*CVWMEA
Trigger: CGCCTCCATCCACACACAGCAGCTCCAACCTGGAGG...AAAGGAGCCTCCCTCTGAAGGGTAGGATGCCGGCCTGAGGCCCTCCCTCTTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp CAGGAATCGCTGACCACTGTGGGGCCCACCCAGTCCAGCTGCTGTCCACTCAAGGTCAGGTCCCTCAGGTaGACTTGGCAGGCTGACCCG +
Preference number: 4 (lower is better)
Translates to: QESLTTVGPTQSSCCPLKVRSLR*TWQADP
Trigger: CGGGTCAGCCTGCCAAGTGCACCTGAGGGACCTGAC...CTTGAGTGGACAGCAGCTGGACTGGGTGGGCCCCACAGTGGTCAGCGATTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp GATGGTTCCCAAAGGGCTGCGTACAGAGATGGAGGGAATGACACTGCCCAGGTATGCCGGCCGCCGCGGTaGTTCCTGGGCCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: DGSQRAAYRDGGNDTAQVCRPPR*FLGLRE
Trigger: CTCCCTGAGGCCCAGGAACCACCGCGGCGGCCGGCA...TACCTGGGCAGTGTCATTCCCTCCATCTCTGTACGCAGCCCTTTGGGAACCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp CCCTCCCTGTTTCCTCTTCCGTTTCAAGACCATTGGGGGAAACGGTCTTGCCCTTGCCGGCCGCCGCGGTaGTTCCTGGGCCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PSLFPLPFQDHWGKRSCPCRPPR*FLGLRE
Trigger: CTCCCTGAGGCCCAGGAACCACCGCGGCGGCCGGCA...AGGGCAAGACCGTTTCCCCCAATGGTCTTGAAACGGAAGAGGAAACAGGGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp GACGACACACGACCCAAGGGTGGAAGAGACTGTGGTTCCCCAAAGCTTCCCAGTGAAGCCGCGCCCGCCTaGAGCTGGGTCCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: DDTRPKGGRDCGSPKLPSEAAPA*SWVQVV
Trigger: CACCACCTGGACCCAGCTCCAGGCGGGCGCGGCTTC...ACTGGGAAGCTTTGGGGAACCACAGTCTCTTCCACCCTTGGGTCGTGTGTCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp GCCAAGAGGGAGGGCCTCAGGCCGGCATCCTACCCTTCAGAGGGAGGCTCCTTTGAGCTGGGGGCTGAGTaGTCTGAGTGGAGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: AKREGLRPASYPSEGGSFELGAE*SEWRKV
Trigger: CACCTTCCTCCACTCAGACCACTCAGCCCCCAGCTC...AAAGGAGCCTCCCTCTGAAGGGTAGGATGCCGGCCTGAGGCCCTCCCTCTTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp GGGCCCACCCAGTCCAGCTGCTGTCCACTCAAGCAGCGGCAGGTGTCAGGTCACGTCCAGCCTCCAGGTTaGAGCTGCTGTGTGTGGATG +
Preference number: 4 (lower is better)
Translates to: GPTQSSCCPLKQRQVSGHVQPPG*SCCVWM
Trigger: CATCCACACACAGCAGCTCCAACCTGGAGGCTGGAC...GTGACCTGACACCTGCCGCTGCTTGAGTGGACAGCAGCTGGACTGGGTGGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR TCA 90 bp GGGGACAACTGGAACCAGGTCTACTCTGGCTTGGGGAGTGATTCAGAGAAGGCTCGTACCCCACACCCCTaGGCACAGCCGGAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: GDNWNQVYSGLGSDSEKARTPHP*AQPEEA
Trigger: GGCCTCCTCCGGCTGTGCTCAGGGGTGTGGGGTACG...AGCCTTCTCTGAATCACTCCCCAAGCCAGAGTAGACCTGGTTCCAGTTGTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR TCA 90 bp GCCAAGAGGGAGGGCCTCAGGCCGGCATCCTACCCTTCAGAGGGAGGCTCCTTTCCTTCCCCAGGACCATaGGTTCAAGGAGGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: AKREGLRPASYPSEGGSFPSPGP*VQGGFR
Trigger: CCTGAACCCTCCTTGAACTCATGGTCCTGGGGAAGG...AAAGGAGCCTCCCTCTGAAGGGTAGGATGCCGGCCTGAGGCCCTCCCTCTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR TCA 90 bp GTGGGGCCCACCCAGTCCAGCTGCTGTCCACTCAAGCAGCGGCAGGTGTCAGGTCCCTTTCTTCCTTGCTaGAGACCTCGGCTAGCTCTG +
Preference number: 4 (lower is better)
Translates to: VGPTQSSCCPLKQRQVSGPFLPC*RPRLAL
Trigger: CAGAGCTAGCCGAGGTCTTCAGCAAGGAAGAAAGGG...ACCTGACACCTGCCGCTGCTTGAGTGGACAGCAGCTGGACTGGGTGGGCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp TTAGCAGCCTTGCTCCCCTCCTCAACACTATTGCCTGGGCTGGTACAAGAGATGGCCCCGGCCAACCCCTaGACCGACGCGCGGTTGACG +
Preference number: 4 (lower is better)
Translates to: LAALLPSSTLLPGLVQEMAPANP*TDARLT
Trigger: CGTCAACCGCGCGTCGGTGCAGGGGTTGGCCGGGGC...CATCTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGGGGAGCAAGGCTGCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR GCA 90 bp TTCCTGGCCCCTTGCCCATCACTCCTCAGGGTGGATGGCTCTGCCATCTCTGTCCCCTTCCTGGCCCCTTaGCCATCACTCCTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: FLAPCPSLLRVDGSAISVPFLAP*PSLLRV
Trigger: CACCCTGAGGAGTGATGGGCAAGGGGCCAGGAAGGG...GACAGAGATGGCAGAGCCATCCACCCTGAGGAGTGATGGGCAAGGGGCCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR GCA 90 bp CAGGAATCGCTGACCACTGTGGGGCCCACCCAGTCCAGCTGCTGTCCACTCAAGCTGCAGAGAGAAGCCTaGCCACCCGCTAGACTCCCT +
Preference number: 4 (lower is better)
Translates to: QESLTTVGPTQSSCCPLKLQREA*PPARLP
Trigger: AGGGAGTCTAGCGGGTGGGCAGGCTTCTCTCTGCAG...CTTGAGTGGACAGCAGCTGGACTGGGTGGGCCCCACAGTGGTCAGCGATTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp CTACCATTGTGTCAGGCCAGCCCGGTGCGGTGTGAGCTCCTGCCCTTCCACCCCGCTTCCTCCAGTCCTTaGCCAGCATTAAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LPLCQASPVRCELLPFHPASSSP*PALSWA
Trigger: TGCCCAGCTTAATGCTGGGCAAGGACTGGAGGAAGC...GGGGTGGAAGGGCAGGAGCTCACACCGCACCGGGCTGGCCTGACACAATGGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp GCCAAGAGGGAGGGCCTCAGGCCGGCATCCTACCCTTCAGAGGGAGGCTCCTTTCCCAATCCGCTCATCTaGTGGCCTCTGGAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: AKREGLRPASYPSEGGSFPNPLI*WPLEAE
Trigger: CTCTGCTTCCAGAGGCCAGCAGATGAGCGGATTGGG...AAAGGAGCCTCCCTCTGAAGGGTAGGATGCCGGCCTGAGGCCCTCCCTCTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636034.1
CDS-3UTR CCA 90 bp GGATGGATCTGTGGGGGCAGCGCCCCTCTTCCTGGTAGCTCACTCGTCCATCCTTCCTCACTCACGCTCTaGTCATCGTCCTCGCTCCGC +
Preference number: 4 (lower is better)
Translates to: GWICGGSAPLPGSSLVHPSSLTL*SSSSLR
Trigger: GCGGAGCGAGGACGATGACCAGAGCGTGAGTGAGGA...AGGATGGACGAGTGAGCTACCAGGAAGAGGGGCGCTGCCCCCACAGATCCATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp AACCCTACTTGGCAGGAATCGCTGACCACTGTGGGGCCCACCCAGTCCAGCTGCAGGAAGGGCCTCACTTaGAGCTGGGGGCTGAGTGGT +
Preference number: 4 (lower is better)
Translates to: NPTWQESLTTVGPTQSSCRKGLT*SWGLSG
Trigger: ACCACTCAGCCCCCAGCTCCAAGTGAGGCCCTTCCT...GCAGCTGGACTGGGTGGGCCCCACAGTGGTCAGCGATTCCTGCCAAGTAGGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp CTGTGGGGCCCACCCAGTCCAGCTGCTGTCCACTCAAGCAGCGGCAGGTGTCAGGATGAAGCAAAAGGATaGATCTGTGGGGGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: LWGPPSPAAVHSSSGRCQDEAKG*ICGGSA
Trigger: GGCGCTGCCCCCACAGATCCATCCTTTTGCTTCATC...CTGACACCTGCCGCTGCTTGAGTGGACAGCAGCTGGACTGGGTGGGCCCCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp GCCACCTCCAGATCTGGAGCTTCCTCCAGTCCTTGCCCAGCATTAAGCTGGGCAGCTGCTGTGTGTGGATaGAGGCGTGGGGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: ATSRSGASSSPCPALSWAAAVCG*RRGGGG
Trigger: CCCTCCTCCCCCACGCCTCCATCCACACACAGCAGC...TGCCCAGCTTAATGCTGGGCAAGGACTGGAGGAAGCTCCAGATCTGGAGGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp CTACCATTGTGTCAGGCCAGCCCGGTGCGGTGTGAGCTCCTGCCCTTCCACCCCGTCATGGAGAGGAGCTaGACAAGCTGCTCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LPLCQASPVRCELLPFHPVMERS*TSCSLP
Trigger: TGGCAGAGAGCAGCTTGTCCAGCTCCTCTCCATGAC...GGGGTGGAAGGGCAGGAGCTCACACCGCACCGGGCTGGCCTGACACAATGGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp GGGCCCACCCAGTCCAGCTGCTGTCCACTCAAGCAGCGGCAGGTGTCAGGTCACTGCCCAGCATTAAGCTaGGCACCCGATTCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: GPTQSSCCPLKQRQVSGHCPALS*APDSLQ
Trigger: CTGCAGAGAATCGGGTGCCCAGCTTAATGCTGGGCA...GTGACCTGACACCTGCCGCTGCTTGAGTGGACAGCAGCTGGACTGGGTGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp CTTCTGCCTGCCTCAGCGGCTATAGCAAGAGTGTGGACTTTGGGGTTCAGGCCCGAGTCTGGCCAGCACTaGTTGGGCGGGGAGGGATGG +
Preference number: 4 (lower is better)
Translates to: LLPASAAIARVWTLGFRPESGQH*LGGEGW
Trigger: CCATCCCTCCCCGCCCAACCAGTGCTGGCCAGACTC...GGGCCTGAACCCCAAAGTCCACACTCTTGCTATAGCCGCTGAGGCAGGCAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR TCA 90 bp GCTGACCACTGTGGGGCCCACCCAGTCCAGCTGCTGTCCACTCAAGCAGCGGCACTTCAGGCTTCCAGGTaGGGCGATAATCTTCCCACT +
Preference number: 4 (lower is better)
Translates to: ADHCGAHPVQLLSTQAAALQASR*GDNLPT
Trigger: AGTGGGAAGATTATCGCCTCACCTGGAAGCCTGAAG...TGCCGCTGCTTGAGTGGACAGCAGCTGGACTGGGTGGGCCCCACAGTGGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR TCA 90 bp CGACCCAAGGGTGGAAGAGACTGTGGTTCCCCAAAGCTTCCCAGTGCACTTGAGGCATGTGGTCTGCGATaGAGCGCACGCCGTCCACCG +
Preference number: 4 (lower is better)
Translates to: RPKGGRDCGSPKLPSALEACGLR*SARRPP
Trigger: CGGTGGACGGCGTGCGCTTCATCGCAGACCACATGC...CTCAAGTGCACTGGGAAGCTTTGGGGAACCACAGTCTCTTCCACCCTTGGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR TCA 90 bp GACGACACACGACCCAAGGGTGGAAGAGACTGTGGTTCCCCAAAGCTTCCCAGTCTTGGCAGGAATCGCTaGCCACTGTGGGGCCCACCC +
Preference number: 4 (lower is better)
Translates to: DDTRPKGGRDCGSPKLPSLGRNR*PLWGPP
Trigger: GGGTGGGCCCCACAGTGGTCAGCGATTCCTGCCAAG...ACTGGGAAGCTTTGGGGAACCACAGTCTCTTCCACCCTTGGGTCGTGTGTCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR TCA 90 bp TCTGCCTGCCTCAGCGGCTATAGCAAGAGTGTGGACTTTGGGGTTCAGGCCCAGAGCAGGGCCAGGACTTaGATCCAGACTCGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SACLSGYSKSVDFGVQAQSRART*IQTRGS
Trigger: GGACCCCCGAGTCTGGATTCAAGTCCTGGCCCTGCT...CTGGGCCTGAACCCCAAAGTCCACACTCTTGCTATAGCCGCTGAGGCAGGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR TCA 90 bp TGCCACCTCCAGATCTGGAGCTTCCTCCAGTCCTTGCCCAGCATTAAGCTGGGCGGAGGGAGGCTGGCATaGCAGTCAGGGGACCCCATT +
Preference number: 4 (lower is better)
Translates to: CHLQIWSFLQSLPSIKLGGGRLA*QSGDPI
Trigger: AATGGGGTCCCCTGACTGTCATGCCAGCCTCCCTCC...GCCCAGCTTAATGCTGGGCAAGGACTGGAGGAAGCTCCAGATCTGGAGGTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR TCA 90 bp CCAGTGCACTTGAGGGTTCACACTCTCCCACCACATGGTAGCACCTTGCCTGGGACAGACGAGATGCGCTaGGGCCTGTCTCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PVHLRVHTLPPHGSTLPGTDEMR*GLSPAA
Trigger: GGCTGCAGGAGACAGGCCTCAGCGCATCTCGTCTGT...CCCAGGCAAGGTGCTACCATGTGGTGGGAGAGTGTGAACCCTCAAGTGCACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR TCA 90 bp TGGCAGGCTGACCCGTCTGTAACCCACCATCTGCTGGCCTCTGGAAGCAGAGTCTCCGTGAGCCCATCCTaGCAGACGAGATGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: WQADPSVTHHLLASGSRVSVSPS*QTRCAE
Trigger: CTCAGCGCATCTCGTCTGTCAGGATGGGCTCACGGA...GACTCTGCTTCCAGAGGCCAGCAGATGGTGGGTTACAGACGGGTCAGCCTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR TCA 90 bp CTACCATTGTGTCAGGCCAGCCCGGTGCGGTGTGAGCTCCTGCCCTTCCACCCCAAGAAAAGGTGTCCGTaGGCCCATCCTGACAGACGA +
Preference number: 4 (lower is better)
Translates to: LPLCQASPVRCELLPFHPKKRCP*AHPDRR
Trigger: TCGTCTGTCAGGATGGGCTCACGGACACCTTTTCTT...GGGGTGGAAGGGCAGGAGCTCACACCGCACCGGGCTGGCCTGACACAATGGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp TGCCCTCACCTCTTCCTTATTGTGATGGTTCCCAAAGGGCTGCGTACAGAGATGGCTGGGTCCAGGTGGTaGCGGCCGCCGCGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: CPHLFLIVMVPKGLRTEMAGSRW*RPPRWF
Trigger: GAACCACCGCGGCGGCCGGCACCACCTGGACCCAGC...CATCTCTGTACGCAGCCCTTTGGGAACCATCACAATAAGGAAGAGGTGAGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp TGTTTCCTCTTCCGTTTCAAGACCATTGGGGGAAACGGTCTTGCCCTTCCTCTGCGCAGCGCCGGGCCATaGCGCGGGCATAGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: CFLFRFKTIGGNGLALPLRSAGP*RGHSSL
Trigger: CAGCGAGCTATGCCCGCGGCATGGCCCGGCGCTGCG...CAGAGGAAGGGCAAGACCGTTTCCCCCAATGGTCTTGAAACGGAAGAGGAAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp GGATGGATCTGTGGGGGCAGCGCCCCTCTTCCTGGTAGCTCACTCGTCCATCCTATCTGCTCCCGCTCATaGACACTGATGAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GWICGGSAPLPGSSLVHPICSRS*TLMSWA
Trigger: GGCCCAGCTCATCAGTGTGCATGAGCGGGAGCAGAT...AGGATGGACGAGTGAGCTACCAGGAAGAGGGGCGCTGCCCCCACAGATCCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR GCA 90 bp CACTGCAACGCCACCTGTCAAAAGCAGAGAGCCTGTGCATGCCTTCTTTTCAGACGTCGGGGTTCTCGTTaGGCCGGCCCGGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: HCNATCQKQRACACLLFRRRGSR*AGPAAP
Trigger: TGGCGCTGCCGGGCCGGCGCAACGAGAACCCCGACG...TCTGAAAAGAAGGCATGCACAGGCTCTCTGCTTTTGACAGGTGGCGTTGCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp CAGGAATCGCTGACCACTGTGGGGCCCACCCAGTCCAGCTGCTGTCCACTCAAGCACCCAACACTACTGTaGAGCAGAGGGTGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: QESLTTVGPTQSSCCPLKHPTLL*SRGWQG
Trigger: ACCCTGCCACCCTCTGCTGCACAGTAGTGTTGGGTG...CTTGAGTGGACAGCAGCTGGACTGGGTGGGCCCCACAGTGGTCAGCGATTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR GCA 90 bp AGCAGCCTTGCTCCCCTCCTCAACACTATTGCCTGGGCTGGTACAAGAGATGGAGTCAGGCCAGCCCGGTaGGGTGTGAGCTCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SSLAPLLNTIAWAGTRDGVRPAR*GVSSCP
Trigger: AGGGCAGGAGCTCACACCGCACCGGGCTGGCCTGAC...TCCATCTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGGGGAGCAAGGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR GCA 90 bp TGTGGGGCCCACCCAGTCCAGCTGCTGTCCACTCAAGCAGCGGCAGGTGTCAGGTGTTCACCTCAGCTCTaGTGTGGACAAAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: CGAHPVQLLSTQAAAGVRCSPQL*CGQRGW
Trigger: CCAGCCTCTTTGTCCACAGCAGAGCTGAGGTGAACA...CCTGACACCTGCCGCTGCTTGAGTGGACAGCAGCTGGACTGGGTGGGCCCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp ACTGGGATACAAACAGCCCCAGGTCCCCAAACCATCCAAAGAGCCCTCCCTGTTAGCCACAGCAGCAGCTaGTGGGGCCTCGGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: TGIQTAPGPQTIQRALPVSHSSS*WGLGVA
Trigger: GGCTACCCCGAGGCCCCAGCAGCTGCTGCTGTGGCT...AACAGGGAGGGCTCTTTGGATGGTTTGGGGACCTGGGGCTGTTTGTATCCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp GGGGGCAGCGCCCCTCTTCCTGGTAGCTCACTCGTCCATCCTCCACCCAACACTCCCCTCCCAAACCCTTaGTCCAGGTTTCCATCCAGT +
Preference number: 4 (lower is better)
Translates to: GGSAPLPGSSLVHPPPNTPLPNP*SRFPSS
Trigger: ACTGGATGGAAACCTGGAGCAAGGGTTTGGGAGGGG...AGTGTTGGGTGGAGGATGGACGAGTGAGCTACCAGGAAGAGGGGCGCTGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp TTAGCAGCCTTGCTCCCCTCCTCAACACTATTGCCTGGGCTGGTACAAGAGATGGAAGCCGCGCCCGCCTaGAGCTGGGTCCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LAALLPSSTLLPGLVQEMEAAPA*SWVQVV
Trigger: CACCACCTGGACCCAGCTCCAGGCGGGCGCGGCTTC...CATCTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGGGGAGCAAGGCTGCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp GCTTCCCTGACATCAAGAGAAGAGGACGACACACGACCCAAGGGTGGAAGAGACTCACCCAGGGCGCCATaGTGTGCGTGGTGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: ASLTSREEDDTRPKGGRDSPRAP*CAWWAS
Trigger: GCTCGCCCACCACGCACACCATGGCGCCCTGGGTGA...GTCTCTTCCACCCTTGGGTCGTGTGTCGTCCTCTTCTCTTGATGTCAGGGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp CTGGCCCCTTGCCCATCACTCCTCAGGGTGGATGGCTCTGCCATCTCTGTCTTCTCCTCACTCACGCTCTaGTCATCGTCCTCGCTCCGC +
Preference number: 4 (lower is better)
Translates to: LAPCPSLLRVDGSAISVFSSLTL*SSSSLR
Trigger: GCGGAGCGAGGACGATGACCAGAGCGTGAGTGAGGA...GAAGACAGAGATGGCAGAGCCATCCACCCTGAGGAGTGATGGGCAAGGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp CGGGTCATGGAGAGGAGCTGGACAAGCTGCTCTCTGCCATCCCCTCTAGCACCAGAGCTGGGGGCTGAGTaGTCTGAGTGGAGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: RVMERSWTSCSLPSPLAPELGAE*SEWRKV
Trigger: CACCTTCCTCCACTCAGACCACTCAGCCCCCAGCTC...TGGTGCTAGAGGGGATGGCAGAGAGCAGCTTGTCCAGCTCCTCTCCATGACCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp CTGGCCCCTTGCCCATCACTCCTCAGGGTGGATGGCTCTGCCATCTCTGTCTTCAGGAAGGGCCTCACTTaGAGCTGGGGGCTGAGTGGT +
Preference number: 4 (lower is better)
Translates to: LAPCPSLLRVDGSAISVFRKGLT*SWGLSG
Trigger: ACCACTCAGCCCCCAGCTCCAAGTGAGGCCCTTCCT...GAAGACAGAGATGGCAGAGCCATCCACCCTGAGGAGTGATGGGCAAGGGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp AACCCTACTTGGCAGGAATCGCTGACCACTGTGGGGCCCACCCAGTCCAGCTGCGTCCAGCCTCCAGGTTaGAGCTGCTGTGTGTGGATG +
Preference number: 4 (lower is better)
Translates to: NPTWQESLTTVGPTQSSCVQPPG*SCCVWM
Trigger: CATCCACACACAGCAGCTCCAACCTGGAGGCTGGAC...GCAGCTGGACTGGGTGGGCCCCACAGTGGTCAGCGATTCCTGCCAAGTAGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp AGGGCCTCAGGCCGGCATCCTACCCTTCAGAGGGAGGCTCCTTTCCTGTTGCTGGTCAAGGTCGGTGAATaGGAGTCTGGCCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: RASGRHPTLQREAPFLLLVKVGE*ESGQHW
Trigger: CCAGTGCTGGCCAGACTCCCATTCACCGACCTTGAC...CAGCAACAGGAAAGGAGCCTCCCTCTGAAGGGTAGGATGCCGGCCTGAGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp ATCTGTGGGGGCAGCGCCCCTCTTCCTGGTAGCTCACTCGTCCATCCTCCACCCTCCCACTCGCTTACCTaGGTCAGCCAGACATTGGTG +
Preference number: 4 (lower is better)
Translates to: ICGGSAPLPGSSLVHPPPSHSLT*VSQTLV
Trigger: CACCAATGTCTGGCTGACCCAGGTAAGCGAGTGGGA...GGGTGGAGGATGGACGAGTGAGCTACCAGGAAGAGGGGCGCTGCCCCCACAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637900.1
CDS-3UTR TCA 90 bp ATTGCCTGGGCTGGTACAAGAGATGGAGAGCAGCCAAAACAAAGCAGTTGGTCCCGTACCCCACACCCCTaGGCACAGCCGGAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: IAWAGTRDGEQPKQSSWSRTPHP*AQPEEA
Trigger: GGCCTCCTCCGGCTGTGCTCAGGGGTGTGGGGTACG...GGACCAACTGCTTTGTTTTGGCTGCTCTCCATCTCTTGTACCAGCCCAGGCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR TCA 90 bp CTACCATTGTGTCAGGCCAGCCCGGTGCGGTGTGAGCTCCTGCCCTTCCACCCCACCTCTTCCTTATTGTaGTGGTTCCCAAAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LPLCQASPVRCELLPFHPTSSLL*WFPKGC
Trigger: GCAGCCCTTTGGGAACCATCACAATAAGGAAGAGGT...GGGGTGGAAGGGCAGGAGCTCACACCGCACCGGGCTGGCCTGACACAATGGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR TCA 90 bp AGGCATAGGGGCTTCCCTGACATCAAGAGAAGAGGACGACACACGACCCAAGGGGCGTGGCTATCACACTaGCCGCCTGGACCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: RHRGFPDIKRRGRHTTQGAWLSH*PPGPVG
Trigger: CCCAACAGGTCCAGGCGGTCAGTGTGATAGCCACGC...CCCTTGGGTCGTGTGTCGTCCTCTTCTCTTGATGTCAGGGAAGCCCCTATGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp AACCCTACTTGGCAGGAATCGCTGACCACTGTGGGGCCCACCCAGTCCAGCTGCGCAGCCAGAAGATGCTaGCATCATAGGAGACCACGG +
Preference number: 4 (lower is better)
Translates to: NPTWQESLTTVGPTQSSCAARRC*HHRRPR
Trigger: CCGTGGTCTCCTATGATGGCAGCATCTTCTGGCTGC...GCAGCTGGACTGGGTGGGCCCCACAGTGGTCAGCGATTCCTGCCAAGTAGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR GCA 90 bp AGGGCCTCAGGCCGGCATCCTACCCTTCAGAGGGAGGCTCCTTTCCTGTTGCTGGCGGCAGCCAGAAGATaGTGCCATCATAGGAGACCA +
Preference number: 4 (lower is better)
Translates to: RASGRHPTLQREAPFLLLAAARR*CHHRRP
Trigger: TGGTCTCCTATGATGGCAGCATCTTCTGGCTGCCGC...CAGCAACAGGAAAGGAGCCTCCCTCTGAAGGGTAGGATGCCGGCCTGAGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp GCCCAGGTAACCCTTTCATATACACTGACCCCTTTCTTCCTTGCTGAAGACCTCCGTCGGGGTTCTCGTTaGGCCGGCCCGGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: AQVTLSYTLTPFFLAEDLRRGSR*AGPAAP
Trigger: TGGCGCTGCCGGGCCGGCGCAACGAGAACCCCGACG...GAGGTCTTCAGCAAGGAAGAAAGGGGTCAGTGTATATGAAAGGGTTACCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp AACAGCAGACAAGCTCTAGGCCTGTTTACTCGTGTGTTAACCGGGTCATGGAGAGCCCCGGCCAACCCCTaGACCGACGCGCGGTTGACG +
Preference number: 4 (lower is better)
Translates to: NSRQALGLFTRVLTGSWRAPANP*TDARLT
Trigger: CGTCAACCGCGCGTCGGTGCAGGGGTTGGCCGGGGC...TCTCCATGACCCGGTTAACACACGAGTAAACAGGCCTAGAGCTTGTCTGCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp CAGCCAGAAGGATGGAGCCATGAGCAGAACAGACTGGAGCAGCACGGATGTAGCGCTCCGCATGTGGTCTaGGATGAAGCGCACGCCGTC +
Preference number: 4 (lower is better)
Translates to: QPEGWSHEQNRLEQHGCSAPHVV*DEAHAV
Trigger: GACGGCGTGCGCTTCATCGCAGACCACATGCGGAGC...GCTACATCCGTGCTGCTCCAGTCTGTTCTGCTCATGGCTCCATCCTTCTGGCTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp AGCCAAAACAAAGCAGTTGGTCCAGCCTCCAGGTTGGAGCTGCTGTGTGTGGATGTCAGGCCAGCCCGGTaGGGTGTGAGCTCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SQNKAVGPASRLELLCVDVRPAR*GVSSCP
Trigger: AGGGCAGGAGCTCACACCGCACCGGGCTGGCCTGAC...ATCCACACACAGCAGCTCCAACCTGGAGGCTGGACCAACTGCTTTGTTTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR GCA 90 bp CCAGTGCACTTGAGGGTTCACACTCTCCCACCACATGGTAGCACCTTGCCTGGGGGGCACCCGATTCTCTaGAGAGATAGCCCCACCACG +
Preference number: 4 (lower is better)
Translates to: PVHLRVHTLPPHGSTLPGGHPIL*RDSPTT
Trigger: CGTGGTGGGGCTATCTCTGCAGAGAATCGGGTGCCC...CCCAGGCAAGGTGCTACCATGTGGTGGGAGAGTGTGAACCCTCAAGTGCACTGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp CTTCTGCCTGCCTCAGCGGCTATAGCAAGAGTGTGGACTTTGGGGTTCAGGCCCTGGGGGAAACGGTCTTaGCCTTCCTCTGCCGTAGCC +
Preference number: 4 (lower is better)
Translates to: LLPASAAIARVWTLGFRPWGKRS*PSSAVA
Trigger: GGCTACGGCAGAGGAAGGGCAAGACCGTTTCCCCCA...GGGCCTGAACCCCAAAGTCCACACTCTTGCTATAGCCGCTGAGGCAGGCAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp TCTGCCTGCCTCAGCGGCTATAGCAAGAGTGTGGACTTTGGGGTTCAGGCCCAGTGGGGGAAACGGTCTTaGCCTTCCTCTGCCGTAGCC +
Preference number: 4 (lower is better)
Translates to: SACLSGYSKSVDFGVQAQWGKRS*PSSAVA
Trigger: GGCTACGGCAGAGGAAGGGCAAGACCGTTTCCCCCA...CTGGGCCTGAACCCCAAAGTCCACACTCTTGCTATAGCCGCTGAGGCAGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp CTTGCCATCTCTGATGGAGATAGTCTCAACCTGTTTCCTCACTTCCCCTCCCAACGCCGCGGTGGTTCCTaGGCCTCAGGGAGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: LAISDGDSLNLFPHFPSQRRGGS*ASGSRL
Trigger: CAGCCGGCTCCCTGAGGCCCAGGAACCACCGCGGCG...TTGGGAGGGGAAGTGAGGAAACAGGTTGAGACTATCTCCATCAGAGATGGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp CTACCATTGTGTCAGGCCAGCCCGGTGCGGTGTGAGCTCCTGCCCTTCCACCCCAGAGCCATTGGTGGCTaGGCGGATAAGCTTGTTGTA +
Preference number: 4 (lower is better)
Translates to: LPLCQASPVRCELLPFHPRAIGG*ADKLVV
Trigger: TACAACAAGCTTATCCGCCCAGCCACCAATGGCTCT...GGGGTGGAAGGGCAGGAGCTCACACCGCACCGGGCTGGCCTGACACAATGGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp GGGGGCAGCGCCCCTCTTCCTGGTAGCTCACTCGTCCATCCTCCACCCAACACTTGCACACTGATGAGCTaGGCCAGTGACACCATAAGC +
Preference number: 4 (lower is better)
Translates to: GGSAPLPGSSLVHPPPNTCTLMS*ASDTIS
Trigger: GCTTATGGTGTCACTGGCCCAGCTCATCAGTGTGCA...AGTGTTGGGTGGAGGATGGACGAGTGAGCTACCAGGAAGAGGGGCGCTGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp CTACCATTGTGTCAGGCCAGCCCGGTGCGGTGTGAGCTCCTGCCCTTCCACCCCAGGAGACCACGGCATTaGAATAGAAGGACACCTCGT +
Preference number: 4 (lower is better)
Translates to: LPLCQASPVRCELLPFHPRRPRH*NRRTPR
Trigger: ACGAGGTGTCCTTCTATTCCAATGCCGTGGTCTCCT...GGGGTGGAAGGGCAGGAGCTCACACCGCACCGGGCTGGCCTGACACAATGGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp GCTGTTCTAGTATTTCTATCTCCCCGCCAGGAAGCTGCCTTCCTCCCACTGCAATCACCCAGGGCGCCATaGTGTGCGTGGTGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: AVLVFLSPRQEAAFLPLQSPRAP*CAWWAS
Trigger: GCTCGCCCACCACGCACACCATGGCGCCCTGGGTGA...TTGCAGTGGGAGGAAGGCAGCTTCCTGGCGGGGAGATAGAAATACTAGAACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp GCTAAACCCTACTTGGCAGGAATCGCTGACCACTGTGGGGCCCACCCAGTCCAGGGCGCAATGATGGCGTaGCTGCTGCATGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: AKPYLAGIADHCGAHPVQGAMMA*LLHEEQ
Trigger: CTGCTCTTCATGCAGCAGCCACGCCATCATTGCGCC...CTGGACTGGGTGGGCCCCACAGTGGTCAGCGATTCCTGCCAAGTAGGGTTTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp TGCCACCTCCAGATCTGGAGCTTCCTCCAGTCCTTGCCCAGCATTAAGCTGGGCTCCTCGCTCCGCATGTaGTCTGCGATGAAGCGCACG +
Preference number: 4 (lower is better)
Translates to: CHLQIWSFLQSLPSIKLGSSLRM*SAMKRT
Trigger: CGTGCGCTTCATCGCAGACCACATGCGGAGCGAGGA...GCCCAGCTTAATGCTGGGCAAGGACTGGAGGAAGCTCCAGATCTGGAGGTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp GCTCCCCTCCTCAACACTATTGCCTGGGCTGGTACAAGAGATGGAGAGCAGCCAGTGTGGATGGAGGCGTaGGGGAGGAGGGACTCCAGA +
Preference number: 4 (lower is better)
Translates to: APLLNTIAWAGTRDGEQPVWMEA*GRRDSR
Trigger: TCTGGAGTCCCTCCTCCCCCACGCCTCCATCCACAC...TGGCTGCTCTCCATCTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp AGCAGCCTTGCTCCCCTCCTCAACACTATTGCCTGGGCTGGTACAAGAGATGGAGCTGCTGTGTGTGGATaGAGGCGTGGGGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: SSLAPLLNTIAWAGTRDGAAVCG*RRGGGG
Trigger: CCCTCCTCCCCCACGCCTCCATCCACACACAGCAGC...TCCATCTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGGGGAGCAAGGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp GGGGACAACTGGAACCAGGTCTACTCTGGCTTGGGGAGTGATTCAGAGAAGGCTGCTGTGGGACTGAGCTaGAAGCCTCCCCCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: GDNWNQVYSGLGSDSEKAAVGLS*KPPPGV
Trigger: GACCCCTGGGGGAGGCTTCCAGCTCAGTCCCACAGC...AGCCTTCTCTGAATCACTCCCCAAGCCAGAGTAGACCTGGTTCCAGTTGTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp GAGCAGCCAAAACAAAGCAGTTGGTCCAGCCTCCAGGTTGGAGCTGCTGTGTGTGCTGTGGGACTGAGCTaGAAGCCTCCCCCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: EQPKQSSWSSLQVGAAVCAVGLS*KPPPGV
Trigger: GACCCCTGGGGGAGGCTTCCAGCTCAGTCCCACAGC...ACACACAGCAGCTCCAACCTGGAGGCTGGACCAACTGCTTTGTTTTGGCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp CACCCAGTCCAGCTGCTGTCCACTCAAGCAGCGGCAGGTGTCAGGTCACACCCATGGGGAAAGAGGATCTaGAGCAGGTCTCTGGATCCC +
Preference number: 4 (lower is better)
Translates to: HPVQLLSTQAAAGVRSHPWGKRI*SRSLDP
Trigger: GGGATCCAGAGACCTGCTCCAGATCCTCTTTCCCCA...TGGGTGTGACCTGACACCTGCCGCTGCTTGAGTGGACAGCAGCTGGACTGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp GCTTCCCTGACATCAAGAGAAGAGGACGACACACGACCCAAGGGTGGAAGAGACGCCTGGGAGGGAGGCTaGCATGACAGTCAGGGGACC +
Preference number: 4 (lower is better)
Translates to: ASLTSREEDDTRPKGGRDAWEGG*HDSQGT
Trigger: GGTCCCCTGACTGTCATGCCAGCCTCCCTCCCAGGC...GTCTCTTCCACCCTTGGGTCGTGTGTCGTCCTCTTCTCTTGATGTCAGGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp GGATGGATCTGTGGGGGCAGCGCCCCTCTTCCTGGTAGCTCACTCGTCCATCCTGGGTGGAAGAGACTGTaGTTCCCCAAAGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: GWICGGSAPLPGSSLVHPGWKRL*FPKASQ
Trigger: CTGGGAAGCTTTGGGGAACCACAGTCTCTTCCACCC...AGGATGGACGAGTGAGCTACCAGGAAGAGGGGCGCTGCCCCCACAGATCCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR TCA 90 bp CCCTCCTCAACACTATTGCCTGGGCTGGTACAAGAGATGGAGAGCAGCCAAAACGCACCGACGCGCGGTTaGCGAAGCACGTGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: PSSTLLPGLVQEMESSQNAPTRG*RSTCRS
Trigger: ACTCCTGCACGTGCTTCGTCAACCGCGCGTCGGTGC...GTTTTGGCTGCTCTCCATCTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR TCA 90 bp CACCCAGTCCAGCTGCTGTCCACTCAAGCAGCGGCAGGTGTCAGGTCACACCCAGAAAGAGCATGGAGATaGGGAAGGGCCTCACTTGGA +
Preference number: 4 (lower is better)
Translates to: HPVQLLSTQAAAGVRSHPERAWR*GRASLG
Trigger: TCCAAGTGAGGCCCTTCCTCATCTCCATGCTCTTTC...TGGGTGTGACCTGACACCTGCCGCTGCTTGAGTGGACAGCAGCTGGACTGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR TCA 90 bp CCAGAAGGATGGAGCCATGAGCAGAACAGACTGGAGCAGCACGGATGTAGCAGGCGAGGCTATGCTTTCTaGGGTGTCGCTGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PEGWSHEQNRLEQHGCSRRGYAF*GVAGSS
Trigger: GCTGCTGCCAGCGACACCTCAGAAAGCATAGCCTCG...CCTGCTACATCCGTGCTGCTCCAGTCTGTTCTGCTCATGGCTCCATCCTTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR TCA 90 bp TCTGCCTGCCTCAGCGGCTATAGCAAGAGTGTGGACTTTGGGGTTCAGGCCCAGGGTATGACACCTGCCTaGCTCTGCCCGGAAACAAGG +
Preference number: 4 (lower is better)
Translates to: SACLSGYSKSVDFGVQAQGMTPA*LCPETR
Trigger: CCTTGTTTCCGGGCAGAGTCAGGCAGGTGTCATACC...CTGGGCCTGAACCCCAAAGTCCACACTCTTGCTATAGCCGCTGAGGCAGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR TCA 90 bp CTGGCCCCTTGCCCATCACTCCTCAGGGTGGATGGCTCTGCCATCTCTGTCTTCTCTAGTCAAGGTCGGTaGATGGGAGTCTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LAPCPSLLRVDGSAISVFSSQGR*MGVWPA
Trigger: TGCTGGCCAGACTCCCATTCACCGACCTTGACTAGA...GAAGACAGAGATGGCAGAGCCATCCACCCTGAGGAGTGATGGGCAAGGGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp ATTGCCTGGGCTGGTACAAGAGATGGAGAGCAGCCAAAACAAAGCAGTTGGTCCGCGGGCATAGCTCGCTaGCTCGCCTACACCGGCTGG +
Preference number: 4 (lower is better)
Translates to: IAWAGTRDGEQPKQSSWSAGIAR*LAYTGW
Trigger: CCAGCCGGTGTAGGCGAGGCAGCGAGCTATGCCCGC...GGACCAACTGCTTTGTTTTGGCTGCTCTCCATCTCTTGTACCAGCCCAGGCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR GCA 90 bp ATAGTTCTCAGATCACCTGTGGCCTTGCCATCTCTGATGGAGATAGTCTCAACCGGGGCCCGCCACTGGTaGAGGCTCAGCCCCGAAGGC +
Preference number: 4 (lower is better)
Translates to: IVLRSPVALPSLMEIVSTGARHW*RLSPEG
Trigger: GCCTTCGGGGCTGAGCCTGCACCAGTGGCGGGCCCC...GGTTGAGACTATCTCCATCAGAGATGGCAAGGCCACAGGTGATCTGAGAACTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp AGAGCAGCCAAAACAAAGCAGTTGGTCCAGCCTCCAGGTTGGAGCTGCTGTGTGCCCACCCAGTCCAGCTaGTGTCCACTCAAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: RAAKTKQLVQPPGWSCCVPTQSS*CPLKQR
Trigger: CCGCTGCTTGAGTGGACAGCAGCTGGACTGGGTGGG...CACACAGCAGCTCCAACCTGGAGGCTGGACCAACTGCTTTGTTTTGGCTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp TGCCACCTCCAGATCTGGAGCTTCCTCCAGTCCTTGCCCAGCATTAAGCTGGGCGGCGCAATGATGGCGTaGCTGCTGCATGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: CHLQIWSFLQSLPSIKLGGAMMA*LLHEEQ
Trigger: CTGCTCTTCATGCAGCAGCCACGCCATCATTGCGCC...GCCCAGCTTAATGCTGGGCAAGGACTGGAGGAAGCTCCAGATCTGGAGGTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp CGACCCAAGGGTGGAAGAGACTGTGGTTCCCCAAAGCTTCCCAGTGCACTTGAGTCCTCACTCACGCTCTaGTCATCGTCCTCGCTCCGC +
Preference number: 4 (lower is better)
Translates to: RPKGGRDCGSPKLPSALESSLTL*SSSSLR
Trigger: GCGGAGCGAGGACGATGACCAGAGCGTGAGTGAGGA...CTCAAGTGCACTGGGAAGCTTTGGGGAACCACAGTCTCTTCCACCCTTGGGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp GGGGGCAGCGCCCCTCTTCCTGGTAGCTCACTCGTCCATCCTCCACCCAACACTGCAGGAACATGCCGATaGTGCCAAAGACACAGACAA +
Preference number: 4 (lower is better)
Translates to: GGSAPLPGSSLVHPPPNTAGTCR*CQRHRQ
Trigger: TTGTCTGTGTCTTTGGCACCATCGGCATGTTCCTGC...AGTGTTGGGTGGAGGATGGACGAGTGAGCTACCAGGAAGAGGGGCGCTGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp ACTTGGCAGGAATCGCTGACCACTGTGGGGCCCACCCAGTCCAGCTGCTGTCCACTGAGTGGAGGAAGGTaGTGGTGGTGTAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: TWQESLTTVGPTQSSCCPLSGGR*WWCSSG
Trigger: TCCAGAACTACACCACCACCACCTTCCTCCACTCAG...TGGACAGCAGCTGGACTGGGTGGGCCCCACAGTGGTCAGCGATTCCTGCCAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp ATCTGTGGGGGCAGCGCCCCTCTTCCTGGTAGCTCACTCGTCCATCCTCCACCCTCTTCTCCCATGACTTaGAGGCAGCAGACAATCCTG +
Preference number: 4 (lower is better)
Translates to: ICGGSAPLPGSSLVHPPPSSPMT*RQQTIL
Trigger: CAGGATTGTCTGCTGCCTCCAAGTCATGGGAGAAGA...GGGTGGAGGATGGACGAGTGAGCTACCAGGAAGAGGGGCGCTGCCCCCACAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp CGGCTAAACCCTACTTGGCAGGAATCGCTGACCACTGTGGGGCCCACCCAGTCCCGGCTAAACCCTACTTaGCAGGAATCGCTGACCACT +
Preference number: 4 (lower is better)
Translates to: RLNPTWQESLTTVGPTQSRLNPT*QESLTT
Trigger: AGTGGTCAGCGATTCCTGCCAAGTAGGGTTTAGCCG...GGACTGGGTGGGCCCCACAGTGGTCAGCGATTCCTGCCAAGTAGGGTTTAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp GGATGGATCTGTGGGGGCAGCGCCCCTCTTCCTGGTAGCTCACTCGTCCATCCTCGGCTAAACCCTACTTaGCAGGAATCGCTGACCACT +
Preference number: 4 (lower is better)
Translates to: GWICGGSAPLPGSSLVHPRLNPT*QESLTT
Trigger: AGTGGTCAGCGATTCCTGCCAAGTAGGGTTTAGCCG...AGGATGGACGAGTGAGCTACCAGGAAGAGGGGCGCTGCCCCCACAGATCCATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp AGGCCTCTCTCTTCCCCTCCCTTCAGAGCTACCATTGTGTCAGGCCAGCCCGGTCCATCTGCTGGCCTCTaGAAGCAGAGTCAGGGTACA +
Preference number: 4 (lower is better)
Translates to: RPLSSPPFRATIVSGQPGPSAGL*KQSQGT
Trigger: TGTACCCTGACTCTGCTTCCAGAGGCCAGCAGATGG...ACCGGGCTGGCCTGACACAATGGTAGCTCTGAAGGGAGGGGAAGAGAGAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp GAGGACCTGGCGCAGAGCAGACCCTTAGTAACAGGAGCTAATACTGGGATACAACACAGCAGCAGCTGCTaGGGCCTCGGGGTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: EDLAQSRPLVTGANTGIQHSSSC*GLGVAQ
Trigger: CTGGGCTACCCCGAGGCCCCAGCAGCTGCTGCTGTG...TTGTATCCCAGTATTAGCTCCTGTTACTAAGGGTCTGCTCTGCGCCAGGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp ACTTGGCAGGAATCGCTGACCACTGTGGGGCCCACCCAGTCCAGCTGCTGTCCAGCTATAGCAAGAGTGTaGACTTTGGGGTTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: TWQESLTTVGPTQSSCCPAIARV*TLGFRP
Trigger: GGGCCTGAACCCCAAAGTCCACACTCTTGCTATAGC...TGGACAGCAGCTGGACTGGGTGGGCCCCACAGTGGTCAGCGATTCCTGCCAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp GTAGCCTTCCTCAGTAGAACACACCACCTGGGGGCTGCTGTGTCTTGTTTGCTTGAGTCTGGCCAGCACTaGTTGGGCGGGGAGGGATGG +
Preference number: 4 (lower is better)
Translates to: VAFLSRTHHLGAAVSCLLESGQH*LGGEGW
Trigger: CCATCCCTCCCCGCCCAACCAGTGCTGGCCAGACTC...AAGCAAACAAGACACAGCAGCCCCCAGGTGGTGTGTTCTACTGAGGAAGGCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR TCA 90 bp TGTTTCCTCTTCCGTTTCAAGACCATTGGGGGAAACGGTCTTGCCCTTCCTCTGGCACCGACGCGCGGTTaGCGAAGCACGTGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: CFLFRFKTIGGNGLALPLAPTRG*RSTCRS
Trigger: ACTCCTGCACGTGCTTCGTCAACCGCGCGTCGGTGC...CAGAGGAAGGGCAAGACCGTTTCCCCCAATGGTCTTGAAACGGAAGAGGAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR TCA 90 bp AGGCCTCTCTCTTCCCCTCCCTTCAGAGCTACCATTGTGTCAGGCCAGCCCGGTGAAAGAGCATGGAGATaGGGAAGGGCCTCACTTGGA +
Preference number: 4 (lower is better)
Translates to: RPLSSPPFRATIVSGQPGERAWR*GRASLG
Trigger: TCCAAGTGAGGCCCTTCCTCATCTCCATGCTCTTTC...ACCGGGCTGGCCTGACACAATGGTAGCTCTGAAGGGAGGGGAAGAGAGAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR TCA 90 bp GCCACCTCCAGATCTGGAGCTTCCTCCAGTCCTTGCCCAGCATTAAGCTGGGCAACCCCTCTTCTCCCATaGCTTGGAGGCAGCAGACAA +
Preference number: 4 (lower is better)
Translates to: ATSRSGASSSPCPALSWATPLLP*LGGSRQ
Trigger: TTGTCTGCTGCCTCCAAGTCATGGGAGAAGAGGGGT...TGCCCAGCTTAATGCTGGGCAAGGACTGGAGGAAGCTCCAGATCTGGAGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR TCA 90 bp AGCCAAAACAAAGCAGTTGGTCCAGCCTCCAGGTTGGAGCTGCTGTGTGTGGATAGAGCCTGGGGTCCCTaGGCACACACCTGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: SQNKAVGPASRLELLCVDRAWGP*AHTCVR
Trigger: CCTGACACAGGTGTGTGCTCAGGGACCCCAGGCTCT...ATCCACACACAGCAGCTCCAACCTGGAGGCTGGACCAACTGCTTTGTTTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR TCA 90 bp CTTCTGCCTGCCTCAGCGGCTATAGCAAGAGTGTGGACTTTGGGGTTCAGGCCCCAGAGATGGAGGGAATaGCACTGCCCAGGTAACCCT +
Preference number: 4 (lower is better)
Translates to: LLPASAAIARVWTLGFRPQRWRE*HCPGNP
Trigger: AGGGTTACCTGGGCAGTGTCATTCCCTCCATCTCTG...GGGCCTGAACCCCAAAGTCCACACTCTTGCTATAGCCGCTGAGGCAGGCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR TCA 90 bp ACTTGGCAGGAATCGCTGACCACTGTGGGGCCCACCCAGTCCAGCTGCTGTCCACTCTGGCTTGGGGAGTaGTTCAGAGAAGGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: TWQESLTTVGPTQSSCCPLWLGE*FREGFE
Trigger: TTCAAAGCCTTCTCTGAATCACTCCCCAAGCCAGAG...TGGACAGCAGCTGGACTGGGTGGGCCCCACAGTGGTCAGCGATTCCTGCCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp ACTTGGCAGGAATCGCTGACCACTGTGGGGCCCACCCAGTCCAGCTGCTGTCCAGGAGGCTTTTCCGGCTaGTCTTCCAGGGAATACAAT +
Preference number: 4 (lower is better)
Translates to: TWQESLTTVGPTQSSCCPGGFSG*SSREYN
Trigger: ATTGTATTCCCTGGAAGAGCAGCCGGAAAAGCCTCC...TGGACAGCAGCTGGACTGGGTGGGCCCCACAGTGGTCAGCGATTCCTGCCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp GCCCAGGTAACCCTTTCATATACACTGACCCCTTTCTTCCTTGCTGAAGACCTCGCGGGCATAGCTCGCTaGCTCGCCTACACCGGCTGG +
Preference number: 4 (lower is better)
Translates to: AQVTLSYTLTPFFLAEDLAGIAR*LAYTGW
Trigger: CCAGCCGGTGTAGGCGAGGCAGCGAGCTATGCCCGC...GAGGTCTTCAGCAAGGAAGAAAGGGGTCAGTGTATATGAAAGGGTTACCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp GCTTCCCTGACATCAAGAGAAGAGGACGACACACGACCCAAGGGTGGAAGAGACCTGAGGCCTGTCTCCTaGAGCCACTGGCTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: ASLTSREEDDTRPKGGRDLRPVS*SHWLPV
Trigger: GACAGGAAGCCAGTGGCTGCAGGAGACAGGCCTCAG...GTCTCTTCCACCCTTGGGTCGTGTGTCGTCCTCTTCTCTTGATGTCAGGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp CGGCTAAACCCTACTTGGCAGGAATCGCTGACCACTGTGGGGCCCACCCAGTCCTGCAGAGACACTCCCTaGTACCAAGAAAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: RLNPTWQESLTTVGPTQSCRDTP*YQEKVS
Trigger: GGACACCTTTTCTTGGTAGCAGGGAGTGTCTCTGCA...GGACTGGGTGGGCCCCACAGTGGTCAGCGATTCCTGCCAAGTAGGGTTTAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp TGCAACGCCACCTGTCAAAAGCAGAGAGCCTGTGCATGCCTTCTTTTCAGACAAAGCCACAGCAGCAGCTaGTGGGGCCTCGGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: CNATCQKQRACACLLFRQSHSSS*WGLGVA
Trigger: GGCTACCCCGAGGCCCCAGCAGCTGCTGCTGTGGCT...TTGTCTGAAAAGAAGGCATGCACAGGCTCTCTGCTTTTGACAGGTGGCGTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp CTGGCCCCTTGCCCATCACTCCTCAGGGTGGATGGCTCTGCCATCTCTGTCTTCTGGTTCCCAAAGGGCTaGGTACAGAGATGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: LAPCPSLLRVDGSAISVFWFPKG*VQRWRE
Trigger: TTCCCTCCATCTCTGTACGCAGCCCTTTGGGAACCA...GAAGACAGAGATGGCAGAGCCATCCACCCTGAGGAGTGATGGGCAAGGGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp CAGGCAACTCCCAATCCGCTCATCTGCTGGCCTCTGGAAGCAGAGTCAGGGTACCCCCTCCCAAACCCTTaGTCCAGGTTTCCATCCAGT +
Preference number: 4 (lower is better)
Translates to: QATPNPLICWPLEAESGYPLPNP*SRFPSS
Trigger: ACTGGATGGAAACCTGGAGCAAGGGTTTGGGAGGGG...GTACCCTGACTCTGCTTCCAGAGGCCAGCAGATGAGCGGATTGGGAGTTGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636034.1
CDS-3UTR GCA 90 bp CTACCATTGTGTCAGGCCAGCCCGGTGCGGTGTGAGCTCCTGCCCTTCCACCCCAAAGCAGAGAGCCTGTaGATGCCTTCTTTTCAGACA +
Preference number: 4 (lower is better)
Translates to: LPLCQASPVRCELLPFHPKAESL*MPSFQT
Trigger: TGTCTGAAAAGAAGGCATGCACAGGCTCTCTGCTTT...GGGGTGGAAGGGCAGGAGCTCACACCGCACCGGGCTGGCCTGACACAATGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp CCAGTGCACTTGAGGGTTCACACTCTCCCACCACATGGTAGCACCTTGCCTGGGAGGAGCTCTTCTGCCTaGCTCAGCGGCTATAGCAAG +
Preference number: 4 (lower is better)
Translates to: PVHLRVHTLPPHGSTLPGRSSSA*LSGYSK
Trigger: CTTGCTATAGCCGCTGAGGCAGGCAGAAGAGCTCCT...CCCAGGCAAGGTGCTACCATGTGGTGGGAGAGTGTGAACCCTCAAGTGCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp CCCCTTGCCCATCACTCCTCAGGGTGGATGGCTCTGCCATCTCTGTCTTCCACTGCTTCTTGCCTATCCTaGTATGAGCAGGCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PLAHHSSGWMALPSLSSTASCLS*YEQAEA
Trigger: AGCCTCCGCCTGCTCATACCAGGATAGGCAAGAAGC...AGTGGAAGACAGAGATGGCAGAGCCATCCACCCTGAGGAGTGATGGGCAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp CGGCTAAACCCTACTTGGCAGGAATCGCTGACCACTGTGGGGCCCACCCAGTCCGTACAGGACCACATCTaGGAGCCAGATGTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: RLNPTWQESLTTVGPTQSVQDHI*EPDVFG
Trigger: TCCAAACACATCTGGCTCCCAGATGTGGTCCTGTAC...GGACTGGGTGGGCCCCACAGTGGTCAGCGATTCCTGCCAAGTAGGGTTTAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp GGATGGATCTGTGGGGGCAGCGCCCCTCTTCCTGGTAGCTCACTCGTCCATCCTCACTATTGCCTGGGCTaGTACAAGAGATGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: GWICGGSAPLPGSSLVHPHYCLG*YKRWRA
Trigger: TGCTCTCCATCTCTTGTACCAGCCCAGGCAATAGTG...AGGATGGACGAGTGAGCTACCAGGAAGAGGGGCGCTGCCCCCACAGATCCATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp CTGGGCACCCGATTCTCTGCAGAGATAGCCCCACCACGGGAAGGAGGCATAGGGGCTTGTCTCACCGTGTaGGTCAGTTTCTTCATCTGC +
Preference number: 4 (lower is better)
Translates to: LGTRFSAEIAPPREGGIGACLTV*VSFFIC
Trigger: GCAGATGAAGAAACTGACCCACACGGTGAGACAAGC...CCCTATGCCTCCTTCCCGTGGTGGGGCTATCTCTGCAGAGAATCGGGTGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp GGGGACAACTGGAACCAGGTCTACTCTGGCTTGGGGAGTGATTCAGAGAAGGCTGCTTCCAGGGACACATaGGGCAGGAAGCCGAGGCTA +
Preference number: 4 (lower is better)
Translates to: GDNWNQVYSGLGSDSEKAASRDT*GRKPRL
Trigger: TAGCCTCGGCTTCCTGCCCCATGTGTCCCTGGAAGC...AGCCTTCTCTGAATCACTCCCCAAGCCAGAGTAGACCTGGTTCCAGTTGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp CTATTGCCTGGGCTGGTACAAGAGATGGAGAGCAGCCAAAACAAAGCAGTTGGTCACAGCAGCAGCTGCTaGGGCCTCGGGGTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: LLPGLVQEMESSQNKAVGHSSSC*GLGVAQ
Trigger: CTGGGCTACCCCGAGGCCCCAGCAGCTGCTGCTGTG...ACCAACTGCTTTGTTTTGGCTGCTCTCCATCTCTTGTACCAGCCCAGGCAATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp TCTGCCTGCCTCAGCGGCTATAGCAAGAGTGTGGACTTTGGGGTTCAGGCCCAGGTCATGGAGAGGAGCTaGACAAGCTGCTCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: SACLSGYSKSVDFGVQAQVMERS*TSCSLP
Trigger: TGGCAGAGAGCAGCTTGTCCAGCTCCTCTCCATGAC...CTGGGCCTGAACCCCAAAGTCCACACTCTTGCTATAGCCGCTGAGGCAGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp TCCAGATCTGGAGCTTCCTCCAGTCCTTGCCCAGCATTAAGCTGGGCACCCGATACCTTGCCTGGGCAGTaGATCCTTCACCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SRSGASSSPCPALSWAPDTLPGQ*ILHLCP
Trigger: AGGGCAGAGGTGAAGGATCCACTGCCCAGGCAAGGT...ATCGGGTGCCCAGCTTAATGCTGGGCAAGGACTGGAGGAAGCTCCAGATCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp CCAGAAGGATGGAGCCATGAGCAGAACAGACTGGAGCAGCACGGATGTAGCAGGCACACGACCCAAGGGTaGAAGAGACTGTGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: PEGWSHEQNRLEQHGCSRHTTQG*KRLWFP
Trigger: GGGGAACCACAGTCTCTTCCACCCTTGGGTCGTGTG...CCTGCTACATCCGTGCTGCTCCAGTCTGTTCTGCTCATGGCTCCATCCTTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp CTGGGCACCCGATTCTCTGCAGAGATAGCCCCACCACGGGAAGGAGGCATAGGGAGGTCTACTCTGGCTTaGGGAGTGATTCAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LGTRFSAEIAPPREGGIGRSTLA*GVIQRR
Trigger: CCTTCTCTGAATCACTCCCCAAGCCAGAGTAGACCT...CCCTATGCCTCCTTCCCGTGGTGGGGCTATCTCTGCAGAGAATCGGGTGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR CAA 72 bp CGGCATCCTACCCTTCAGAGGGAGGCTCCTTTCCTGTaGCTGTTTCTGGTTCCAAGACGCCTTCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: RHPTLQREAPFL*LFLVPRRLPQD
Trigger: GTCCTGGGGAAGGCGTCTTGGAACCAGAAACAGCAACAGGAAAGGAGCCTCCCTCTGAAGGGTAGGATGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR TCA 90 bp AGGCCTCTCTCTTCCCCTCCCTTCAGAGCTACCATTGTGTCAGGCCAGCCCGGTAGGAGGGACTCCAGATaGAGCAAAAGGATGGATCTG +
Preference number: 4 (lower is better)
Translates to: RPLSSPPFRATIVSGQPGRRDSR*SKRMDL
Trigger: CAGATCCATCCTTTTGCTTCATCTGGAGTCCCTCCT...ACCGGGCTGGCCTGACACAATGGTAGCTCTGAAGGGAGGGGAAGAGAGAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR TCA 90 bp GGCTATAGCAAGAGTGTGGACTTTGGGGTTCAGGCCCAGCACTACTCACTAGCTCGAGGCTATGCTTTCTaGGGTGTCGCTGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GYSKSVDFGVQAQHYSLARGYAF*GVAGSS
Trigger: GCTGCTGCCAGCGACACCTCAGAAAGCATAGCCTCG...AGCTAGTGAGTAGTGCTGGGCCTGAACCCCAAAGTCCACACTCTTGCTATAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR TCA 90 bp GATGGTTCCCAAAGGGCTGCGTACAGAGATGGAGGGAATGACACTGCCCAGGTAGCTTCCCAGTGCACTTaGGGGTTCACACTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: DGSQRAAYRDGGNDTAQVASQCT*GFTLSH
Trigger: GTGGGAGAGTGTGAACCCTCAAGTGCACTGGGAAGC...TACCTGGGCAGTGTCATTCCCTCCATCTCTGTACGCAGCCCTTTGGGAACCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR TCA 90 bp TCTGCCTGCCTCAGCGGCTATAGCAAGAGTGTGGACTTTGGGGTTCAGGCCCAGGGCATCGAGGGTGGCTaGGTGAGTGTCCTAATGATT +
Preference number: 4 (lower is better)
Translates to: SACLSGYSKSVDFGVQAQGIEGG*VSVLMI
Trigger: AATCATTAGGACACTCACTCAGCCACCCTCGATGCC...CTGGGCCTGAACCCCAAAGTCCACACTCTTGCTATAGCCGCTGAGGCAGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp AACCCTACTTGGCAGGAATCGCTGACCACTGTGGGGCCCACCCAGTCCAGCTGCGAGAAACCAGCTTCTTaGCTATCCTGGTATGAGCAG +
Preference number: 4 (lower is better)
Translates to: NPTWQESLTTVGPTQSSCEKPAS*LSWYEQ
Trigger: CTGCTCATACCAGGATAGGCAAGAAGCTGGTTTCTC...GCAGCTGGACTGGGTGGGCCCCACAGTGGTCAGCGATTCCTGCCAAGTAGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR GCA 90 bp ATCAAGAGAAGAGGACGACACACGACCCAAGGGTGGAAGAGACTGTGGTTCCCCATCTGCTCCCGCTCATaGACACTGATGAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: IKRRGRHTTQGWKRLWFPICSRS*TLMSWA
Trigger: GGCCCAGCTCATCAGTGTGCATGAGCGGGAGCAGAT...GGGGAACCACAGTCTCTTCCACCCTTGGGTCGTGTGTCGTCCTCTTCTCTTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp CACCCAGTCCAGCTGCTGTCCACTCAAGCAGCGGCAGGTGTCAGGTCACACCCAAGGACACCTCGTACATaGCGTCAGCATTGTTGTACA +
Preference number: 4 (lower is better)
Translates to: HPVQLLSTQAAAGVRSHPRTPRT*RQHCCT
Trigger: TGTACAACAATGCTGACGGCATGTACGAGGTGTCCT...TGGGTGTGACCTGACACCTGCCGCTGCTTGAGTGGACAGCAGCTGGACTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR GCA 90 bp GACGACACACGACCCAAGGGTGGAAGAGACTGTGGTTCCCCAAAGCTTCCCAGTGCAGCCAGAAGATGCTaGCATCATAGGAGACCACGG +
Preference number: 4 (lower is better)
Translates to: DDTRPKGGRDCGSPKLPSAARRC*HHRRPR
Trigger: CCGTGGTCTCCTATGATGGCAGCATCTTCTGGCTGC...ACTGGGAAGCTTTGGGGAACCACAGTCTCTTCCACCCTTGGGTCGTGTGTCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp CCTCTTCCTGGTAGCTCACTCGTCCATCCTCCACCCAACACTACTGTGCAGCAGGCGGCAGCCAGAAGATaGTGCCATCATAGGAGACCA +
Preference number: 4 (lower is better)
Translates to: PLPGSSLVHPPPNTTVQQAAARR*CHHRRP
Trigger: TGGTCTCCTATGATGGCAGCATCTTCTGGCTGCCGC...CTGCTGCACAGTAGTGTTGGGTGGAGGATGGACGAGTGAGCTACCAGGAAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR GCA 90 bp CCTCTTCCTGGTAGCTCACTCGTCCATCCTCCACCCAACACTACTGTGCAGCAGCCAAGTCGATCTCTGTaGGGTCGTAGGTCCACGAAC +
Preference number: 4 (lower is better)
Translates to: PLPGSSLVHPPPNTTVQQPSRSL*GRRSTN
Trigger: GTTCGTGGACCTACGACCGCACAGAGATCGACTTGG...CTGCTGCACAGTAGTGTTGGGTGGAGGATGGACGAGTGAGCTACCAGGAAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR GCA 90 bp TTCCTGGCCCCTTGCCCATCACTCCTCAGGGTGGATGGCTCTGCCATCTCTGTCCCTCCTCAACACTATTaGCTGGGCTGGTACAAGAGA +
Preference number: 4 (lower is better)
Translates to: FLAPCPSLLRVDGSAISVPPQHY*LGWYKR
Trigger: TCTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGG...GACAGAGATGGCAGAGCCATCCACCCTGAGGAGTGATGGGCAAGGGGCCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR GCA 90 bp ACAGGCAACTCCCAATCCGCTCATCTGCTGGCCTCTGGAAGCAGAGTCAGGGTAAGGAAGCCGAGGCTATaGTTTCTGAGGTGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: TGNSQSAHLLASGSRVRVRKPRL*FLRCRW
Trigger: CCAGCGACACCTCAGAAAGCATAGCCTCGGCTTCCT...TACCCTGACTCTGCTTCCAGAGGCCAGCAGATGAGCGGATTGGGAGTTGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636034.1
CDS-3UTR GCA 90 bp CACCCAGTCCAGCTGCTGTCCACTCAAGCAGCGGCAGGTGTCAGGTCACACCCAAGGCTCCTTTCCTGTTaGTGTTTCTGGTTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: HPVQLLSTQAAAGVRSHPRLLSC*CFWFQD
Trigger: GTCTTGGAACCAGAAACAGCAACAGGAAAGGAGCCT...TGGGTGTGACCTGACACCTGCCGCTGCTTGAGTGGACAGCAGCTGGACTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp AGGGCCTCAGGCCGGCATCCTACCCTTCAGAGGGAGGCTCCTTTCCTGTTGCTGTGGATCCTTCACCTCTaGCCTCACCTCTTCCTTATT +
Preference number: 4 (lower is better)
Translates to: RASGRHPTLQREAPFLLLWILHL*PHLFLI
Trigger: AATAAGGAAGAGGTGAGGGCAGAGGTGAAGGATCCA...CAGCAACAGGAAAGGAGCCTCCCTCTGAAGGGTAGGATGCCGGCCTGAGGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp CCCTCCTCAACACTATTGCCTGGGCTGGTACAAGAGATGGAGAGCAGCCAAAACGGGCACCCGATTCTCTaGAGAGATAGCCCCACCACG +
Preference number: 4 (lower is better)
Translates to: PSSTLLPGLVQEMESSQNGHPIL*RDSPTT
Trigger: CGTGGTGGGGCTATCTCTGCAGAGAATCGGGTGCCC...GTTTTGGCTGCTCTCCATCTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp TCTGCCTGCCTCAGCGGCTATAGCAAGAGTGTGGACTTTGGGGTTCAGGCCCAGTCCATCCAGTATCTCTaGCACCTCCAGATCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SACLSGYSKSVDFGVQAQSIQYL*HLQIWS
Trigger: GCTCCAGATCTGGAGGTGGCAGAGATACTGGATGGA...CTGGGCCTGAACCCCAAAGTCCACACTCTTGCTATAGCCGCTGAGGCAGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp CGACCCAAGGGTGGAAGAGACTGTGGTTCCCCAAAGCTTCCCAGTGCACTTGAGCTGCCTTCCTCCCACTaGAACGCCACCTGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: RPKGGRDCGSPKLPSALELPSSH*NATCQK
Trigger: CTTTTGACAGGTGGCGTTGCAGTGGGAGGAAGGCAG...CTCAAGTGCACTGGGAAGCTTTGGGGAACCACAGTCTCTTCCACCCTTGGGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp TTCCTGGCCCCTTGCCCATCACTCCTCAGGGTGGATGGCTCTGCCATCTCTGTCACACCACCTGGGGGCTaGTGTGTCTTGTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: FLAPCPSLLRVDGSAISVTPPGG*CVLFAF
Trigger: AAAAGCAAACAAGACACAGCAGCCCCCAGGTGGTGT...GACAGAGATGGCAGAGCCATCCACCCTGAGGAGTGATGGGCAAGGGGCCAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp GACGACACACGACCCAAGGGTGGAAGAGACTGTGGTTCCCCAAAGCTTCCCAGTGGATGGTATGACACCTaGCTGACTCTGCCCGGAAAC +
Preference number: 4 (lower is better)
Translates to: DDTRPKGGRDCGSPKLPSGWYDT*LTLPGN
Trigger: GTTTCCGGGCAGAGTCAGGCAGGTGTCATACCATCC...ACTGGGAAGCTTTGGGGAACCACAGTCTCTTCCACCCTTGGGTCGTGTGTCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp TCAAGAGAAGAGGACGACACACGACCCAAGGGTGGAAGAGACTGTGGTTCCCCAGGCGCAATGATGGCGTaGCTGCTGCATGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SREEDDTRPKGGRDCGSPGAMMA*LLHEEQ
Trigger: CTGCTCTTCATGCAGCAGCCACGCCATCATTGCGCC...TGGGGAACCACAGTCTCTTCCACCCTTGGGTCGTGTGTCGTCCTCTTCTCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp TCCCTGTTTCCTCTTCCGTTTCAAGACCATTGGGGGAAACGGTCTTGCCCTTCCTCCTCGCTCCGCATGTaGTCTGCGATGAAGCGCACG +
Preference number: 4 (lower is better)
Translates to: SLFPLPFQDHWGKRSCPSSSLRM*SAMKRT
Trigger: CGTGCGCTTCATCGCAGACCACATGCGGAGCGAGGA...GGAAGGGCAAGACCGTTTCCCCCAATGGTCTTGAAACGGAAGAGGAAACAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp AACCCTACTTGGCAGGAATCGCTGACCACTGTGGGGCCCACCCAGTCCAGCTGCGGCTGGTACAAGAGATaGAGAGCAGCCAAAACAAAG +
Preference number: 4 (lower is better)
Translates to: NPTWQESLTTVGPTQSSCGWYKR*RAAKTK
Trigger: CTTTGTTTTGGCTGCTCTCCATCTCTTGTACCAGCC...GCAGCTGGACTGGGTGGGCCCCACAGTGGTCAGCGATTCCTGCCAAGTAGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp TCAGAGCTACCATTGTGTCAGGCCAGCCCGGTGCGGTGTGAGCTCCTGCCCTTCCTCAACACTATTGCCTaGGCTGGTACAAGAGATGGA +
Preference number: 4 (lower is better)
Translates to: SELPLCQASPVRCELLPFLNTIA*AGTRDG
Trigger: TCCATCTCTTGTACCAGCCCAGGCAATAGTGTTGAG...GAAGGGCAGGAGCTCACACCGCACCGGGCTGGCCTGACACAATGGTAGCTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp TTAGCAGCCTTGCTCCCCTCCTCAACACTATTGCCTGGGCTGGTACAAGAGATGATCCTGTCCCCTTCCTaGCCCCTTGCCCATCACTCC +
Preference number: 4 (lower is better)
Translates to: LAALLPSSTLLPGLVQEMILSPS*PLAHHS
Trigger: GGAGTGATGGGCAAGGGGCCAGGAAGGGGACAGGAT...CATCTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGGGGAGCAAGGCTGCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp GACGACACACGACCCAAGGGTGGAAGAGACTGTGGTTCCCCAAAGCTTCCCAGTTGGGGAAAGAGGATCTaGAGCAGGTCTCTGGATCCC +
Preference number: 4 (lower is better)
Translates to: DDTRPKGGRDCGSPKLPSWGKRI*SRSLDP
Trigger: GGGATCCAGAGACCTGCTCCAGATCCTCTTTCCCCA...ACTGGGAAGCTTTGGGGAACCACAGTCTCTTCCACCCTTGGGTCGTGTGTCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp GGCTATAGCAAGAGTGTGGACTTTGGGGTTCAGGCCCAGCACTACTCACTAGCTGCTTCCAGGGACACATaGGGCAGGAAGCCGAGGCTA +
Preference number: 4 (lower is better)
Translates to: GYSKSVDFGVQAQHYSLAASRDT*GRKPRL
Trigger: TAGCCTCGGCTTCCTGCCCCATGTGTCCCTGGAAGC...AGCTAGTGAGTAGTGCTGGGCCTGAACCCCAAAGTCCACACTCTTGCTATAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp GACGACACACGACCCAAGGGTGGAAGAGACTGTGGTTCCCCAAAGCTTCCCAGTAGCAGGAGTCCCAGCTaGGCTCTAGGGACAAAATGG +
Preference number: 4 (lower is better)
Translates to: DDTRPKGGRDCGSPKLPSSRSPS*ALGTKW
Trigger: CCATTTTGTCCCTAGAGCCCAGCTGGGACTCCTGCT...ACTGGGAAGCTTTGGGGAACCACAGTCTCTTCCACCCTTGGGTCGTGTGTCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp TTCTCCCATGACTTGGAGGCAGCAGACAATCCTGTCCCCTTCCTGGCCCCTTGCCCGTTTCAAGACCATTaGGGGAAACGGTCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: FSHDLEAADNPVPFLAPCPFQDH*GKRSCP
Trigger: AGGGCAAGACCGTTTCCCCCAATGGTCTTGAAACGG...GCAAGGGGCCAGGAAGGGGACAGGATTGTCTGCTGCCTCCAAGTCATGGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp AGAGCAGCCAAAACAAAGCAGTTGGTCCAGCCTCCAGGTTGGAGCTGCTGTGTGTTGGGCGGGGAGGGATaGTATGACACCTGCCTGACT +
Preference number: 4 (lower is better)
Translates to: RAAKTKQLVQPPGWSCCVLGGEG*YDTCLT
Trigger: AGTCAGGCAGGTGTCATACCATCCCTCCCCGCCCAA...CACACAGCAGCTCCAACCTGGAGGCTGGACCAACTGCTTTGTTTTGGCTGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp CCCTCCCTGTTTCCTCTTCCGTTTCAAGACCATTGGGGGAAACGGTCTTGCCCTGTCAAGGTCGGTGAATaGGAGTCTGGCCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: PSLFPLPFQDHWGKRSCPVKVGE*ESGQHW
Trigger: CCAGTGCTGGCCAGACTCCCATTCACCGACCTTGAC...AGGGCAAGACCGTTTCCCCCAATGGTCTTGAAACGGAAGAGGAAACAGGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR TCA 90 bp ATAGTTCTCAGATCACCTGTGGCCTTGCCATCTCTGATGGAGATAGTCTCAACCGCATGTGGTCTGCGATaGAGCGCACGCCGTCCACCG +
Preference number: 4 (lower is better)
Translates to: IVLRSPVALPSLMEIVSTACGLR*SARRPP
Trigger: CGGTGGACGGCGTGCGCTTCATCGCAGACCACATGC...GGTTGAGACTATCTCCATCAGAGATGGCAAGGCCACAGGTGATCTGAGAACTAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR TCA 90 bp AGCAGCCTTGCTCCCCTCCTCAACACTATTGCCTGGGCTGGTACAAGAGATGGAACCCCTCTTCTCCCATaGCTTGGAGGCAGCAGACAA +
Preference number: 4 (lower is better)
Translates to: SSLAPLLNTIAWAGTRDGTPLLP*LGGSRQ
Trigger: TTGTCTGCTGCCTCCAAGTCATGGGAGAAGAGGGGT...TCCATCTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGGGGAGCAAGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR TCA 90 bp TCAGGCCCAGCACTACTCACTAGCTGTCACTTGGTCTTTCTGAGCCGCATTTCTGTGCACTTGGCAGGCTaGCCCGTCTGTAACCCACCA +
Preference number: 4 (lower is better)
Translates to: SGPALLTSCHLVFLSRISVHLAG*PVCNPP
Trigger: TGGTGGGTTACAGACGGGTCAGCCTGCCAAGTGCAC...AGAAATGCGGCTCAGAAAGACCAAGTGACAGCTAGTGAGTAGTGCTGGGCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR TCA 90 bp GTAGCCTTCCTCAGTAGAACACACCACCTGGGGGCTGCTGTGTCTTGTTTGCTTCCTTCCCCAGGACCATaGGTTCAAGGAGGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: VAFLSRTHHLGAAVSCLLPSPGP*VQGGFR
Trigger: CCTGAACCCTCCTTGAACTCATGGTCCTGGGGAAGG...AAGCAAACAAGACACAGCAGCCCCCAGGTGGTGTGTTCTACTGAGGAAGGCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR TCA 90 bp AGCCAAAACAAAGCAGTTGGTCCAGCCTCCAGGTTGGAGCTGCTGTGTGTGGATGCTTCCCAGTGCACTTaGGGGTTCACACTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SQNKAVGPASRLELLCVDASQCT*GFTLSH
Trigger: GTGGGAGAGTGTGAACCCTCAAGTGCACTGGGAAGC...ATCCACACACAGCAGCTCCAACCTGGAGGCTGGACCAACTGCTTTGTTTTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp CCCTCCTCAACACTATTGCCTGGGCTGGTACAAGAGATGGAGAGCAGCCAAAACATCTGCTCCCGCTCATaGACACTGATGAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PSSTLLPGLVQEMESSQNICSRS*TLMSWA
Trigger: GGCCCAGCTCATCAGTGTGCATGAGCGGGAGCAGAT...GTTTTGGCTGCTCTCCATCTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR GCA 90 bp GCTTCCCTGACATCAAGAGAAGAGGACGACACACGACCCAAGGGTGGAAGAGACGAGGCTGCAGGAACATaGCGATGGTGCCAAAGACAC +
Preference number: 4 (lower is better)
Translates to: ASLTSREEDDTRPKGGRDEAAGT*RWCQRH
Trigger: GTGTCTTTGGCACCATCGGCATGTTCCTGCAGCCTC...GTCTCTTCCACCCTTGGGTCGTGTGTCGTCCTCTTCTCTTGATGTCAGGGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp ATCAAGAGAAGAGGACGACACACGACCCAAGGGTGGAAGAGACTGTGGTTCCCCAGTCAGACCCACCTGTaGTTGTCTCACCGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: IKRRGRHTTQGWKRLWFPSQTHL*LSHRVG
Trigger: ACCCACACGGTGAGACAAGCACAGGTGGGTCTGACT...GGGGAACCACAGTCTCTTCCACCCTTGGGTCGTGTGTCGTCCTCTTCTCTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp ACTGGGATACAAACAGCCCCAGGTCCCCAAACCATCCAAAGAGCCCTCCCTGTTCACATGGTAGCACCTTaGCTGGGCAGTGGATCCTTC +
Preference number: 4 (lower is better)
Translates to: TGIQTAPGPQTIQRALPVHMVAP*LGSGSF
Trigger: GAAGGATCCACTGCCCAGGCAAGGTGCTACCATGTG...AACAGGGAGGGCTCTTTGGATGGTTTGGGGACCTGGGGCTGTTTGTATCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp ACTGGGATACAAACAGCCCCAGGTCCCCAAACCATCCAAAGAGCCCTCCCTGTTAGGAGCTCTTCTGCCTaGCTCAGCGGCTATAGCAAG +
Preference number: 4 (lower is better)
Translates to: TGIQTAPGPQTIQRALPVRSSSA*LSGYSK
Trigger: CTTGCTATAGCCGCTGAGGCAGGCAGAAGAGCTCCT...AACAGGGAGGGCTCTTTGGATGGTTTGGGGACCTGGGGCTGTTTGTATCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp AGCTGGACAAGCTGCTCTCTGCCATCCCCTCTAGCACCATTTGGTGACTTAACTCAAATACTCCAGGCGTaGAGAGCGGGGAGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: SWTSCSLPSPLAPFGDLTQILQA*RAGRPR
Trigger: CCTTGGCCTCCCCGCTCTGCACGCCTGGAGTATTTG...AGTTAAGTCACCAAATGGTGCTAGAGGGGATGGCAGAGAGCAGCTTGTCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp GGGGACAACTGGAACCAGGTCTACTCTGGCTTGGGGAGTGATTCAGAGAAGGCTTCCAGGGAATACAATTaGGACGGTGAGGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GDNWNQVYSGLGSDSEKASREYN*DGEGEE
Trigger: CTCCTCCCCCTCACCGTCCCAATTGTATTCCCTGGA...AGCCTTCTCTGAATCACTCCCCAAGCCAGAGTAGACCTGGTTCCAGTTGTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp CCCCTTGCCCATCACTCCTCAGGGTGGATGGCTCTGCCATCTCTGTCTTCCACTGTACAGGACCACATCTaGGAGCCAGATGTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: PLAHHSSGWMALPSLSSTVQDHI*EPDVFG
Trigger: TCCAAACACATCTGGCTCCCAGATGTGGTCCTGTAC...AGTGGAAGACAGAGATGGCAGAGCCATCCACCCTGAGGAGTGATGGGCAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp ATTGCCTGGGCTGGTACAAGAGATGGAGAGCAGCCAAAACAAAGCAGTTGGTCCTCCTCGCTCCGCATGTaGTCTGCGATGAAGCGCACG +
Preference number: 4 (lower is better)
Translates to: IAWAGTRDGEQPKQSSWSSSLRM*SAMKRT
Trigger: CGTGCGCTTCATCGCAGACCACATGCGGAGCGAGGA...GGACCAACTGCTTTGTTTTGGCTGCTCTCCATCTCTTGTACCAGCCCAGGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp CACTATTGCCTGGGCTGGTACAAGAGATGGAGAGCAGCCAAAACAAAGCAGTTGGTGTGGATGGAGGCGTaGGGGAGGAGGGACTCCAGA +
Preference number: 4 (lower is better)
Translates to: HYCLGWYKRWRAAKTKQLVWMEA*GRRDSR
Trigger: TCTGGAGTCCCTCCTCCCCCACGCCTCCATCCACAC...CAACTGCTTTGTTTTGGCTGCTCTCCATCTCTTGTACCAGCCCAGGCAATAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp ACCCGATTCTCTGCAGAGATAGCCCCACCACGGGAAGGAGGCATAGGGGCTTCCCTCAACACTATTGCCTaGGCTGGTACAAGAGATGGA +
Preference number: 4 (lower is better)
Translates to: TRFSAEIAPPREGGIGASLNTIA*AGTRDG
Trigger: TCCATCTCTTGTACCAGCCCAGGCAATAGTGTTGAG...GGAAGCCCCTATGCCTCCTTCCCGTGGTGGGGCTATCTCTGCAGAGAATCGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp GAGGACCTGGCGCAGAGCAGACCCTTAGTAACAGGAGCTAATACTGGGATACAAATCCTGTCCCCTTCCTaGCCCCTTGCCCATCACTCC +
Preference number: 4 (lower is better)
Translates to: EDLAQSRPLVTGANTGIQILSPS*PLAHHS
Trigger: GGAGTGATGGGCAAGGGGCCAGGAAGGGGACAGGAT...TTGTATCCCAGTATTAGCTCCTGTTACTAAGGGTCTGCTCTGCGCCAGGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp TCAAGAGAAGAGGACGACACACGACCCAAGGGTGGAAGAGACTGTGGTTCCCCAACCTCAGCTCTGCTGTaGACAAAGAGGCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: SREEDDTRPKGGRDCGSPTSALL*TKRLGW
Trigger: CCAACCCAGCCTCTTTGTCCACAGCAGAGCTGAGGT...TGGGGAACCACAGTCTCTTCCACCCTTGGGTCGTGTGTCGTCCTCTTCTCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp AAGACAACGCATGCTGAGGACCTGGCGCAGAGCAGACCCTTAGTAACAGGAGCTGGGTGGAAGAGACTGTaGTTCCCCAAAGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: KTTHAEDLAQSRPLVTGAGWKRL*FPKASQ
Trigger: CTGGGAAGCTTTGGGGAACCACAGTCTCTTCCACCC...AGCTCCTGTTACTAAGGGTCTGCTCTGCGCCAGGTCCTCAGCATGCGTTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp ACTTGGCAGGCTGACCCGTCTGTAACCCACCATCTGCTGGCCTCTGGAAGCAGAAGGTCTACTCTGGCTTaGGGAGTGATTCAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: TWQADPSVTHHLLASGSRRSTLA*GVIQRR
Trigger: CCTTCTCTGAATCACTCCCCAAGCCAGAGTAGACCT...TCTGCTTCCAGAGGCCAGCAGATGGTGGGTTACAGACGGGTCAGCCTGCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp TCCCTGTTTCCTCTTCCGTTTCAAGACCATTGGGGGAAACGGTCTTGCCCTTCCTTGGGCGGGGAGGGATaGTATGACACCTGCCTGACT +
Preference number: 4 (lower is better)
Translates to: SLFPLPFQDHWGKRSCPSLGGEG*YDTCLT
Trigger: AGTCAGGCAGGTGTCATACCATCCCTCCCCGCCCAA...GGAAGGGCAAGACCGTTTCCCCCAATGGTCTTGAAACGGAAGAGGAAACAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp GATGGTTCCCAAAGGGCTGCGTACAGAGATGGAGGGAATGACACTGCCCAGGTATGGGGGCATCGAGGGTaGCTGAGTGAGTGTCCTAAT +
Preference number: 4 (lower is better)
Translates to: DGSQRAAYRDGGNDTAQVWGHRG*LSECPN
Trigger: ATTAGGACACTCACTCAGCCACCCTCGATGCCCCCA...TACCTGGGCAGTGTCATTCCCTCCATCTCTGTACGCAGCCCTTTGGGAACCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp TCAAGAGAAGAGGACGACACACGACCCAAGGGTGGAAGAGACTGTGGTTCCCCATGGGGGCATCGAGGGTaGCTGAGTGAGTGTCCTAAT +
Preference number: 4 (lower is better)
Translates to: SREEDDTRPKGGRDCGSPWGHRG*LSECPN
Trigger: ATTAGGACACTCACTCAGCCACCCTCGATGCCCCCA...TGGGGAACCACAGTCTCTTCCACCCTTGGGTCGTGTGTCGTCCTCTTCTCTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR CAA 72 bp GAAGAGACTGTGGTTCCCCAAAGCTTCCCAGTGCACTaGAGGGTTCACACTCTCCCACCACATGGTAGCACC +
Preference number: 4 (lower is better)
Translates to: EETVVPQSFPVH*RVHTLPPHGST
Trigger: GGTGCTACCATGTGGTGGGAGAGTGTGAACCCTCAAGTGCACTGGGAAGCTTTGGGGAACCACAGTCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR TCA 90 bp GAGCAGCCAAAACAAAGCAGTTGGTCCAGCCTCCAGGTTGGAGCTGCTGTGTGTGATGAGCTGGGCCAGTaGCACCATAAGCTGTACTGT +
Preference number: 4 (lower is better)
Translates to: EQPKQSSWSSLQVGAAVCDELGQ*HHKLYC
Trigger: ACAGTACAGCTTATGGTGTCACTGGCCCAGCTCATC...ACACACAGCAGCTCCAACCTGGAGGCTGGACCAACTGCTTTGTTTTGGCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR TCA 90 bp GGGGACAACTGGAACCAGGTCTACTCTGGCTTGGGGAGTGATTCAGAGAAGGCTCTTCAGGCTTCCAGGTaGGGCGATAATCTTCCCACT +
Preference number: 4 (lower is better)
Translates to: GDNWNQVYSGLGSDSEKALQASR*GDNLPT
Trigger: AGTGGGAAGATTATCGCCTCACCTGGAAGCCTGAAG...AGCCTTCTCTGAATCACTCCCCAAGCCAGAGTAGACCTGGTTCCAGTTGTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR TCA 90 bp CAGCCAGAAGGATGGAGCCATGAGCAGAACAGACTGGAGCAGCACGGATGTAGCAGGAGGGACTCCAGATaGAGCAAAAGGATGGATCTG +
Preference number: 4 (lower is better)
Translates to: QPEGWSHEQNRLEQHGCSRRDSR*SKRMDL
Trigger: CAGATCCATCCTTTTGCTTCATCTGGAGTCCCTCCT...GCTACATCCGTGCTGCTCCAGTCTGTTCTGCTCATGGCTCCATCCTTCTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR TCA 90 bp TCCAGATCTGGAGCTTCCTCCAGTCCTTGCCCAGCATTAAGCTGGGCACCCGATACCTCTTCCTTATTGTaGTGGTTCCCAAAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SRSGASSSPCPALSWAPDTSSLL*WFPKGC
Trigger: GCAGCCCTTTGGGAACCATCACAATAAGGAAGAGGT...ATCGGGTGCCCAGCTTAATGCTGGGCAAGGACTGGAGGAAGCTCCAGATCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR TCA 90 bp CCCTCCCTGTTTCCTCTTCCGTTTCAAGACCATTGGGGGAAACGGTCTTGCCCTGGCATCGAGGGTGGCTaGGTGAGTGTCCTAATGATT +
Preference number: 4 (lower is better)
Translates to: PSLFPLPFQDHWGKRSCPGIEGG*VSVLMI
Trigger: AATCATTAGGACACTCACTCAGCCACCCTCGATGCC...AGGGCAAGACCGTTTCCCCCAATGGTCTTGAAACGGAAGAGGAAACAGGGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp GCCACCTCCAGATCTGGAGCTTCCTCCAGTCCTTGCCCAGCATTAAGCTGGGCAAGGACACCTCGTACATaGCGTCAGCATTGTTGTACA +
Preference number: 4 (lower is better)
Translates to: ATSRSGASSSPCPALSWARTPRT*RQHCCT
Trigger: TGTACAACAATGCTGACGGCATGTACGAGGTGTCCT...TGCCCAGCTTAATGCTGGGCAAGGACTGGAGGAAGCTCCAGATCTGGAGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp CCTCCCTGTTTCCTCTTCCGTTTCAAGACCATTGGGGGAAACGGTCTTGCCCTTGCAGCCAGAAGATGCTaGCATCATAGGAGACCACGG +
Preference number: 4 (lower is better)
Translates to: PPCFLFRFKTIGGNGLALAARRC*HHRRPR
Trigger: CCGTGGTCTCCTATGATGGCAGCATCTTCTGGCTGC...AAGGGCAAGACCGTTTCCCCCAATGGTCTTGAAACGGAAGAGGAAACAGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp CCCTCCTCAACACTATTGCCTGGGCTGGTACAAGAGATGGAGAGCAGCCAAAACCCAAGTCGATCTCTGTaGGGTCGTAGGTCCACGAAC +
Preference number: 4 (lower is better)
Translates to: PSSTLLPGLVQEMESSQNPSRSL*GRRSTN
Trigger: GTTCGTGGACCTACGACCGCACAGAGATCGACTTGG...GTTTTGGCTGCTCTCCATCTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR GCA 90 bp GGCTATAGCAAGAGTGTGGACTTTGGGGTTCAGGCCCAGCACTACTCACTAGCTCCAAGTCGATCTCTGTaGGGTCGTAGGTCCACGAAC +
Preference number: 4 (lower is better)
Translates to: GYSKSVDFGVQAQHYSLAPSRSL*GRRSTN
Trigger: GTTCGTGGACCTACGACCGCACAGAGATCGACTTGG...AGCTAGTGAGTAGTGCTGGGCCTGAACCCCAAAGTCCACACTCTTGCTATAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp TCTGCCTGCCTCAGCGGCTATAGCAAGAGTGTGGACTTTGGGGTTCAGGCCCAGGGAACATGCCGATGGTaGCAAAGACACAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: SACLSGYSKSVDFGVQAQGTCRW*QRHRQR
Trigger: TCTTTGTCTGTGTCTTTGGCACCATCGGCATGTTCC...CTGGGCCTGAACCCCAAAGTCCACACTCTTGCTATAGCCGCTGAGGCAGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp TCACCTCTTCCTTATTGTGATGGTTCCCAAAGGGCTGCGTACAGAGATGGAGGGCACCCAACACTACTGTaGAGCAGAGGGTGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: SPLPYCDGSQRAAYRDGGHPTLL*SRGWQG
Trigger: ACCCTGCCACCCTCTGCTGCACAGTAGTGTTGGGTG...CCCTCCATCTCTGTACGCAGCCCTTTGGGAACCATCACAATAAGGAAGAGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp CACTATTGCCTGGGCTGGTACAAGAGATGGAGAGCAGCCAAAACAAAGCAGTTGCCTCCAGGTTGGAGCTaGTGTGTGTGGATGGAGGCG +
Preference number: 4 (lower is better)
Translates to: HYCLGWYKRWRAAKTKQLPPGWS*CVWMEA
Trigger: CGCCTCCATCCACACACAGCAGCTCCAACCTGGAGG...CAACTGCTTTGTTTTGGCTGCTCTCCATCTCTTGTACCAGCCCAGGCAATAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR GCA 90 bp CAGCCAGAAGGATGGAGCCATGAGCAGAACAGACTGGAGCAGCACGGATGTAGCCCTCCTCAACACTATTaGCTGGGCTGGTACAAGAGA +
Preference number: 4 (lower is better)
Translates to: QPEGWSHEQNRLEQHGCSPPQHY*LGWYKR
Trigger: TCTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGG...GCTACATCCGTGCTGCTCCAGTCTGTTCTGCTCATGGCTCCATCCTTCTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp CACTATTGCCTGGGCTGGTACAAGAGATGGAGAGCAGCCAAAACAAAGCAGTTGGGGGTCCCTGTCCCATaGTCTGTGCCTGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: HYCLGWYKRWRAAKTKQLGVPVP*SVPVLC
Trigger: ACACAGCACAGGCACAGAGCATGGGACAGGGACCCC...CAACTGCTTTGTTTTGGCTGCTCTCCATCTCTTGTACCAGCCCAGGCAATAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp CCTCTTCCTGGTAGCTCACTCGTCCATCCTCCACCCAACACTACTGTGCAGCAGCTCACCAGCTCCAGTTaGCTGTCAGACTCAACATTC +
Preference number: 4 (lower is better)
Translates to: PLPGSSLVHPPPNTTVQQLTSSS*LSDSTF
Trigger: GAATGTTGAGTCTGACAGGCAACTGGAGCTGGTGAG...CTGCTGCACAGTAGTGTTGGGTGGAGGATGGACGAGTGAGCTACCAGGAAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp CCTCCCTGTTTCCTCTTCCGTTTCAAGACCATTGGGGGAAACGGTCTTGCCCTTCACATGGTAGCACCTTaGCTGGGCAGTGGATCCTTC +
Preference number: 4 (lower is better)
Translates to: PPCFLFRFKTIGGNGLALHMVAP*LGSGSF
Trigger: GAAGGATCCACTGCCCAGGCAAGGTGCTACCATGTG...AAGGGCAAGACCGTTTCCCCCAATGGTCTTGAAACGGAAGAGGAAACAGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp AGCCAAAACAAAGCAGTTGGTCCAGCCTCCAGGTTGGAGCTGCTGTGTGTGGATCTGCCTTCCTCCCACTaGAACGCCACCTGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: SQNKAVGPASRLELLCVDLPSSH*NATCQK
Trigger: CTTTTGACAGGTGGCGTTGCAGTGGGAGGAAGGCAG...ATCCACACACAGCAGCTCCAACCTGGAGGCTGGACCAACTGCTTTGTTTTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp TGCAACGCCACCTGTCAAAAGCAGAGAGCCTGTGCATGCCTTCTTTTCAGACAACAAATACTCCAGGCGTaGAGAGCGGGGAGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: CNATCQKQRACACLLFRQQILQA*RAGRPR
Trigger: CCTTGGCCTCCCCGCTCTGCACGCCTGGAGTATTTG...TTGTCTGAAAAGAAGGCATGCACAGGCTCTCTGCTTTTGACAGGTGGCGTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp CCTCCCTGTTTCCTCTTCCGTTTCAAGACCATTGGGGGAAACGGTCTTGCCCTTGCTTCTTGCCTATCCTaGTATGAGCAGGCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PPCFLFRFKTIGGNGLALASCLS*YEQAEA
Trigger: AGCCTCCGCCTGCTCATACCAGGATAGGCAAGAAGC...AAGGGCAAGACCGTTTCCCCCAATGGTCTTGAAACGGAAGAGGAAACAGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp GGGGACAACTGGAACCAGGTCTACTCTGGCTTGGGGAGTGATTCAGAGAAGGCTTGCACACTGATGAGCTaGGCCAGTGACACCATAAGC +
Preference number: 4 (lower is better)
Translates to: GDNWNQVYSGLGSDSEKACTLMS*ASDTIS
Trigger: GCTTATGGTGTCACTGGCCCAGCTCATCAGTGTGCA...AGCCTTCTCTGAATCACTCCCCAAGCCAGAGTAGACCTGGTTCCAGTTGTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp CCAGAAGGATGGAGCCATGAGCAGAACAGACTGGAGCAGCACGGATGTAGCAGGGCAGGAACATGCCGATaGTGCCAAAGACACAGACAA +
Preference number: 4 (lower is better)
Translates to: PEGWSHEQNRLEQHGCSRAGTCR*CQRHRQ
Trigger: TTGTCTGTGTCTTTGGCACCATCGGCATGTTCCTGC...CCTGCTACATCCGTGCTGCTCCAGTCTGTTCTGCTCATGGCTCCATCCTTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp ACAGGCAACTCCCAATCCGCTCATCTGCTGGCCTCTGGAAGCAGAGTCAGGGTAATGAGCAGAACAGACTaGAGCAGCACGGATGTAGCA +
Preference number: 4 (lower is better)
Translates to: TGNSQSAHLLASGSRVRVMSRTD*SSTDVA
Trigger: TGCTACATCCGTGCTGCTCCAGTCTGTTCTGCTCAT...TACCCTGACTCTGCTTCCAGAGGCCAGCAGATGAGCGGATTGGGAGTTGCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636034.1
CDS-3UTR CCA 90 bp GGGGACAACTGGAACCAGGTCTACTCTGGCTTGGGGAGTGATTCAGAGAAGGCTTCCTGTTGCTGTTTCTaGTTCCAAGACGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: GDNWNQVYSGLGSDSEKASCCCF*FQDAFP
Trigger: GGGGAAGGCGTCTTGGAACCAGAAACAGCAACAGGA...AGCCTTCTCTGAATCACTCCCCAAGCCAGAGTAGACCTGGTTCCAGTTGTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp GATGGAGAGCAGCCAAAACAAAGCAGTTGGTCCAGCCTCCAGGTTGGAGCTGCTGTGTTAACCGGGTCATaGAGAGGAGCTGGACAAGCT +
Preference number: 4 (lower is better)
Translates to: DGEQPKQSSWSSLQVGAAVLTGS*RGAGQA
Trigger: AGCTTGTCCAGCTCCTCTCCATGACCCGGTTAACAC...AGCAGCTCCAACCTGGAGGCTGGACCAACTGCTTTGTTTTGGCTGCTCTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp CACTGCAACGCCACCTGTCAAAAGCAGAGAGCCTGTGCATGCCTTCTTTTCAGAACCTTGCCTGGGCAGTaGATCCTTCACCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: HCNATCQKQRACACLLFRTLPGQ*ILHLCP
Trigger: AGGGCAGAGGTGAAGGATCCACTGCCCAGGCAAGGT...TCTGAAAAGAAGGCATGCACAGGCTCTCTGCTTTTGACAGGTGGCGTTGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
3UTR CAA 72 bp TGGTACAAGAGATGGAGAGCAGCCAAAACAAAGCAGTaGGTCCAGCCTCCAGGTTGGAGCTGCTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: WYKRWRAAKTKQ*VQPPGWSCCVW
Trigger: CCACACACAGCAGCTCCAACCTGGAGGCTGGACCAACTGCTTTGTTTTGGCTGCTCTCCATCTCTTGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR TCA 90 bp AAGACAACGCATGCTGAGGACCTGGCGCAGAGCAGACCCTTAGTAACAGGAGCTTCAAGTATTTGGACCTaGGACTCCAAGCAGGTCACC +
Preference number: 4 (lower is better)
Translates to: KTTHAEDLAQSRPLVTGASSIWT*DSKQVT
Trigger: GGTGACCTGCTTGGAGTCTCAGGTCCAAATACTTGA...AGCTCCTGTTACTAAGGGTCTGCTCTGCGCCAGGTCCTCAGCATGCGTTGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR TCA 90 bp TGCCACCTCCAGATCTGGAGCTTCCTCCAGTCCTTGCCCAGCATTAAGCTGGGCTCTAGCACCATTTGGTaGCTTAACTTGGACAACAGC +
Preference number: 4 (lower is better)
Translates to: CHLQIWSFLQSLPSIKLGSSTIW*LNLDNS
Trigger: GCTGTTGTCCAAGTTAAGTCACCAAATGGTGCTAGA...GCCCAGCTTAATGCTGGGCAAGGACTGGAGGAAGCTCCAGATCTGGAGGTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR TCA 90 bp TGCCACCTCCAGATCTGGAGCTTCCTCCAGTCCTTGCCCAGCATTAAGCTGGGCATTCAGAGAAGGCTTTaGATGCCCCTTACTTTCCTC +
Preference number: 4 (lower is better)
Translates to: CHLQIWSFLQSLPSIKLGIQRRL*MPLTFL
Trigger: GAGGAAAGTAAGGGGCATTCAAAGCCTTCTCTGAAT...GCCCAGCTTAATGCTGGGCAAGGACTGGAGGAAGCTCCAGATCTGGAGGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR TCA 90 bp ACTGGGATACAAACAGCCCCAGGTCCCCAAACCATCCAAAGAGCCCTCCCTGTTCTCTGGCTTGGGGAGTaGTTCAGAGAAGGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: TGIQTAPGPQTIQRALPVLWLGE*FREGFE
Trigger: TTCAAAGCCTTCTCTGAATCACTCCCCAAGCCAGAG...AACAGGGAGGGCTCTTTGGATGGTTTGGGGACCTGGGGCTGTTTGTATCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR TCA 90 bp TCAGGCCCAGCACTACTCACTAGCTGTCACTTGGTCTTTCTGAGCCGCATTTCTTCTAGTCAAGGTCGGTaGATGGGAGTCTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SGPALLTSCHLVFLSRISSSQGR*MGVWPA
Trigger: TGCTGGCCAGACTCCCATTCACCGACCTTGACTAGA...AGAAATGCGGCTCAGAAAGACCAAGTGACAGCTAGTGAGTAGTGCTGGGCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR TCA 90 bp AGGCATAGGGGCTTCCCTGACATCAAGAGAAGAGGACGACACACGACCCAAGGGCTGGACCTGTTGGGATaGATACTAAAAGGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: RHRGFPDIKRRGRHTTQGLDLLG*ILKGGC
Trigger: ACAGCCACCTTTTAGTATTCATCCCAACAGGTCCAG...CCCTTGGGTCGTGTGTCGTCCTCTTCTCTTGATGTCAGGGAAGCCCCTATGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp TCACCTCTTCCTTATTGTGATGGTTCCCAAAGGGCTGCGTACAGAGATGGAGGGGAGGCTGCAGGAACATaGCGATGGTGCCAAAGACAC +
Preference number: 4 (lower is better)
Translates to: SPLPYCDGSQRAAYRDGGEAAGT*RWCQRH
Trigger: GTGTCTTTGGCACCATCGGCATGTTCCTGCAGCCTC...CCCTCCATCTCTGTACGCAGCCCTTTGGGAACCATCACAATAAGGAAGAGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp ATTGCCTGGGCTGGTACAAGAGATGGAGAGCAGCCAAAACAAAGCAGTTGGTCCGAGGCTGCAGGAACATaGCGATGGTGCCAAAGACAC +
Preference number: 4 (lower is better)
Translates to: IAWAGTRDGEQPKQSSWSEAAGT*RWCQRH
Trigger: GTGTCTTTGGCACCATCGGCATGTTCCTGCAGCCTC...GGACCAACTGCTTTGTTTTGGCTGCTCTCCATCTCTTGTACCAGCCCAGGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR GCA 90 bp AGGGCCTCAGGCCGGCATCCTACCCTTCAGAGGGAGGCTCCTTTCCTGTTGCTGGTCAGTTTCTTCATCTaGAACATGGCTTATGTTGGA +
Preference number: 4 (lower is better)
Translates to: RASGRHPTLQREAPFLLLVSFFI*NMAYVG
Trigger: TCCAACATAAGCCATGTTGCAGATGAAGAAACTGAC...CAGCAACAGGAAAGGAGCCTCCCTCTGAAGGGTAGGATGCCGGCCTGAGGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp CTTGCCATCTCTGATGGAGATAGTCTCAACCTGTTTCCTCACTTCCCCTCCCAACTGTCCCATGCTCTGTaGCTGTGCTGTGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LAISDGDSLNLFPHFPSQLSHAL*LCCVSS
Trigger: GGAGGAGACACAGCACAGGCACAGAGCATGGGACAG...TTGGGAGGGGAAGTGAGGAAACAGGTTGAGACTATCTCCATCAGAGATGGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp GACGACACACGACCCAAGGGTGGAAGAGACTGTGGTTCCCCAAAGCTTCCCAGTTGGATCCTTCACCTCTaGCCTCACCTCTTCCTTATT +
Preference number: 4 (lower is better)
Translates to: DDTRPKGGRDCGSPKLPSWILHL*PHLFLI
Trigger: AATAAGGAAGAGGTGAGGGCAGAGGTGAAGGATCCA...ACTGGGAAGCTTTGGGGAACCACAGTCTCTTCCACCCTTGGGTCGTGTGTCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp ATAGTGCAGAGACACTCCCTGCTACCAAGAAAAGGTGTCCGTGAGCCCATCCTGTCCATCCAGTATCTCTaGCACCTCCAGATCTGGAGC +
Preference number: 4 (lower is better)
Translates to: IVQRHSLLPRKGVREPILSIQYL*HLQIWS
Trigger: GCTCCAGATCTGGAGGTGGCAGAGATACTGGATGGA...CAGGATGGGCTCACGGACACCTTTTCTTGGTAGCAGGGAGTGTCTCTGCACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp CCCTCCCTGTTTCCTCTTCCGTTTCAAGACCATTGGGGGAAACGGTCTTGCCCTAGAGCCATTGGTGGCTaGGCGGATAAGCTTGTTGTA +
Preference number: 4 (lower is better)
Translates to: PSLFPLPFQDHWGKRSCPRAIGG*ADKLVV
Trigger: TACAACAAGCTTATCCGCCCAGCCACCAATGGCTCT...AGGGCAAGACCGTTTCCCCCAATGGTCTTGAAACGGAAGAGGAAACAGGGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp TCAAGAGAAGAGGACGACACACGACCCAAGGGTGGAAGAGACTGTGGTTCCCCAAGAGCCATTGGTGGCTaGGCGGATAAGCTTGTTGTA +
Preference number: 4 (lower is better)
Translates to: SREEDDTRPKGGRDCGSPRAIGG*ADKLVV
Trigger: TACAACAAGCTTATCCGCCCAGCCACCAATGGCTCT...TGGGGAACCACAGTCTCTTCCACCCTTGGGTCGTGTGTCGTCCTCTTCTCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp CCCTCCTCAACACTATTGCCTGGGCTGGTACAAGAGATGGAGAGCAGCCAAAACTGCACACTGATGAGCTaGGCCAGTGACACCATAAGC +
Preference number: 4 (lower is better)
Translates to: PSSTLLPGLVQEMESSQNCTLMS*ASDTIS
Trigger: GCTTATGGTGTCACTGGCCCAGCTCATCAGTGTGCA...GTTTTGGCTGCTCTCCATCTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp TCAAGAGAAGAGGACGACACACGACCCAAGGGTGGAAGAGACTGTGGTTCCCCAAGGAGACCACGGCATTaGAATAGAAGGACACCTCGT +
Preference number: 4 (lower is better)
Translates to: SREEDDTRPKGGRDCGSPRRPRH*NRRTPR
Trigger: ACGAGGTGTCCTTCTATTCCAATGCCGTGGTCTCCT...TGGGGAACCACAGTCTCTTCCACCCTTGGGTCGTGTGTCGTCCTCTTCTCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp TCAGGCCCAGCACTACTCACTAGCTGTCACTTGGTCTTTCTGAGCCGCATTTCTGATGAAGCAAAAGGATaGATCTGTGGGGGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: SGPALLTSCHLVFLSRISDEAKG*ICGGSA
Trigger: GGCGCTGCCCCCACAGATCCATCCTTTTGCTTCATC...AGAAATGCGGCTCAGAAAGACCAAGTGACAGCTAGTGAGTAGTGCTGGGCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp GAGCAGCCAAAACAAAGCAGTTGGTCCAGCCTCCAGGTTGGAGCTGCTGTGTGTCCAAAACAAAGCAGTTaGTCCAGCCTCCAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: EQPKQSSWSSLQVGAAVCPKQSS*SSLQVG
Trigger: TCCAACCTGGAGGCTGGACCAACTGCTTTGTTTTGG...ACACACAGCAGCTCCAACCTGGAGGCTGGACCAACTGCTTTGTTTTGGCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp AGCAGCCTTGCTCCCCTCCTCAACACTATTGCCTGGGCTGGTACAAGAGATGGACACTATTGCCTGGGCTaGTACAAGAGATGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: SSLAPLLNTIAWAGTRDGHYCLG*YKRWRA
Trigger: TGCTCTCCATCTCTTGTACCAGCCCAGGCAATAGTG...TCCATCTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGGGGAGCAAGGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp GGCTATAGCAAGAGTGTGGACTTTGGGGTTCAGGCCCAGCACTACTCACTAGCTACTCCTCAGGGTGGATaGCTCTGCCATCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: GYSKSVDFGVQAQHYSLATPQGG*LCHLCL
Trigger: AAGACAGAGATGGCAGAGCCATCCACCCTGAGGAGT...AGCTAGTGAGTAGTGCTGGGCCTGAACCCCAAAGTCCACACTCTTGCTATAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp CGGCTAAACCCTACTTGGCAGGAATCGCTGACCACTGTGGGGCCCACCCAGTCCTCTTCATCTGCAACATaGCTTATGTTGGAATCCATG +
Preference number: 4 (lower is better)
Translates to: RLNPTWQESLTTVGPTQSSSSAT*LMLESM
Trigger: CATGGATTCCAACATAAGCCATGTTGCAGATGAAGA...GGACTGGGTGGGCCCCACAGTGGTCAGCGATTCCTGCCAAGTAGGGTTTAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp TCAAACAGCAGACAAGCTCTAGGCCTGTTTACTCGTGTGTTAACCGGGTCATGGAGGGCACTCGACAGATaGATCTCAGGGCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: SNSRQALGLFTRVLTGSWRALDR*ISGQGG
Trigger: TCCTCCCTGCCCTGAGATCCATCTGTCGAGTGCCCT...CCATGACCCGGTTAACACACGAGTAAACAGGCCTAGAGCTTGTCTGCTGTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp AGCAGCCTTGCTCCCCTCCTCAACACTATTGCCTGGGCTGGTACAAGAGATGGAATGAGCAGAACAGACTaGAGCAGCACGGATGTAGCA +
Preference number: 4 (lower is better)
Translates to: SSLAPLLNTIAWAGTRDGMSRTD*SSTDVA
Trigger: TGCTACATCCGTGCTGCTCCAGTCTGTTCTGCTCAT...TCCATCTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGGGGAGCAAGGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp AGCTGGACAAGCTGCTCTCTGCCATCCCCTCTAGCACCATTTGGTGACTTAACTGTCTCCTGCAGCCACTaGCTTCCTGTCCCAGTGATA +
Preference number: 4 (lower is better)
Translates to: SWTSCSLPSPLAPFGDLTVSCSH*LPVPVI
Trigger: TATCACTGGGACAGGAAGCCAGTGGCTGCAGGAGAC...AGTTAAGTCACCAAATGGTGCTAGAGGGGATGGCAGAGAGCAGCTTGTCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp CGGGTCATGGAGAGGAGCTGGACAAGCTGCTCTCTGCCATCCCCTCTAGCACCATTTGGTGACTTAACTTaGACAACAGCCATGTATGGG +
Preference number: 4 (lower is better)
Translates to: RVMERSWTSCSLPSPLAPFGDLT*TTAMYG
Trigger: CCCATACATGGCTGTTGTCCAAGTTAAGTCACCAAA...TGGTGCTAGAGGGGATGGCAGAGAGCAGCTTGTCCAGCTCCTCTCCATGACCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp TTCAGGCATAATACAGGCAACTCCCAATCCGCTCATCTGCTGGCCTCTGGAAGCGTGTTAACCGGGTCATaGAGAGGAGCTGGACAAGCT +
Preference number: 4 (lower is better)
Translates to: FRHNTGNSQSAHLLASGSVLTGS*RGAGQA
Trigger: AGCTTGTCCAGCTCCTCTCCATGACCCGGTTAACAC...GCTTCCAGAGGCCAGCAGATGAGCGGATTGGGAGTTGCCTGTATTATGCCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636034.1
CDS-3UTR CCA 90 bp GTAGCCTTCCTCAGTAGAACACACCACCTGGGGGCTGCTGTGTCTTGTTTGCTTGTAGAACACACCACCTaGGGGCTGCTGTGTCTTGTT +
Preference number: 4 (lower is better)
Translates to: VAFLSRTHHLGAAVSCLLVEHTT*GLLCLV
Trigger: AACAAGACACAGCAGCCCCCAGGTGGTGTGTTCTAC...AAGCAAACAAGACACAGCAGCCCCCAGGTGGTGTGTTCTACTGAGGAAGGCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp GCTGTTCTAGTATTTCTATCTCCCCGCCAGGAAGCTGCCTTCCTCCCACTGCAACCGTTTCAAGACCATTaGGGGAAACGGTCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: AVLVFLSPRQEAAFLPLQPFQDH*GKRSCP
Trigger: AGGGCAAGACCGTTTCCCCCAATGGTCTTGAAACGG...TTGCAGTGGGAGGAAGGCAGCTTCCTGGCGGGGAGATAGAAATACTAGAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp CCCTCCCTGTTTCCTCTTCCGTTTCAAGACCATTGGGGGAAACGGTCTTGCCCTATCACACTGACCGCCTaGACCTGTTGGGATGAATAC +
Preference number: 4 (lower is better)
Translates to: PSLFPLPFQDHWGKRSCPITLTA*TCWDEY
Trigger: GTATTCATCCCAACAGGTCCAGGCGGTCAGTGTGAT...AGGGCAAGACCGTTTCCCCCAATGGTCTTGAAACGGAAGAGGAAACAGGGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR TCA 90 bp ATTGCCTGGGCTGGTACAAGAGATGGAGAGCAGCCAAAACAAAGCAGTTGGTCCCTTCAGGCTTCCAGGTaGGGCGATAATCTTCCCACT +
Preference number: 4 (lower is better)
Translates to: IAWAGTRDGEQPKQSSWSLQASR*GDNLPT
Trigger: AGTGGGAAGATTATCGCCTCACCTGGAAGCCTGAAG...GGACCAACTGCTTTGTTTTGGCTGCTCTCCATCTCTTGTACCAGCCCAGGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR TCA 90 bp TTCAGGCATAATACAGGCAACTCCCAATCCGCTCATCTGCTGGCCTCTGGAAGCTCAAGTATTTGGACCTaGGACTCCAAGCAGGTCACC +
Preference number: 4 (lower is better)
Translates to: FRHNTGNSQSAHLLASGSSSIWT*DSKQVT
Trigger: GGTGACCTGCTTGGAGTCTCAGGTCCAAATACTTGA...GCTTCCAGAGGCCAGCAGATGAGCGGATTGGGAGTTGCCTGTATTATGCCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636034.1
CDS-3UTR TCA 90 bp GCTCCCCTCCTCAACACTATTGCCTGGGCTGGTACAAGAGATGGAGAGCAGCCAAGTTCCAAAAGCCCATaGACTTGGACTTCTCACAGA +
Preference number: 4 (lower is better)
Translates to: APLLNTIAWAGTRDGEQPSSKSP*TWTSHR
Trigger: TCTGTGAGAAGTCCAAGTTCATGGGCTTTTGGAACT...TGGCTGCTCTCCATCTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR TCA 90 bp CTTGCCATCTCTGATGGAGATAGTCTCAACCTGTTTCCTCACTTCCCCTCCCAACCCTTTCTTCCTTGCTaGAGACCTCGGCTAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LAISDGDSLNLFPHFPSQPFLPC*RPRLAL
Trigger: CAGAGCTAGCCGAGGTCTTCAGCAAGGAAGAAAGGG...TTGGGAGGGGAAGTGAGGAAACAGGTTGAGACTATCTCCATCAGAGATGGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR TCA 90 bp TGCAACGCCACCTGTCAAAAGCAGAGAGCCTGTGCATGCCTTCTTTTCAGACAACAGAGATGGAGGGAATaGCACTGCCCAGGTAACCCT +
Preference number: 4 (lower is better)
Translates to: CNATCQKQRACACLLFRQQRWRE*HCPGNP
Trigger: AGGGTTACCTGGGCAGTGTCATTCCCTCCATCTCTG...TTGTCTGAAAAGAAGGCATGCACAGGCTCTCTGCTTTTGACAGGTGGCGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR TCA 90 bp TGTGGGTCAGTTTCTTCATCTGCAACATGGCTTATGTTGGAATCCATGGCTGTAGCGTGGCTATCACACTaGCCGCCTGGACCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: CGSVSSSATWLMLESMAVAWLSH*PPGPVG
Trigger: CCCAACAGGTCCAGGCGGTCAGTGTGATAGCCACGC...TACAGCCATGGATTCCAACATAAGCCATGTTGCAGATGAAGAAACTGACCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp GCTTCCCTGACATCAAGAGAAGAGGACGACACACGACCCAAGGGTGGAAGAGACGAGAAACCAGCTTCTTaGCTATCCTGGTATGAGCAG +
Preference number: 4 (lower is better)
Translates to: ASLTSREEDDTRPKGGRDEKPAS*LSWYEQ
Trigger: CTGCTCATACCAGGATAGGCAAGAAGCTGGTTTCTC...GTCTCTTCCACCCTTGGGTCGTGTGTCGTCCTCTTCTCTTGATGTCAGGGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp AAGACAACGCATGCTGAGGACCTGGCGCAGAGCAGACCCTTAGTAACAGGAGCTAGGACACCTCGTACATaGCGTCAGCATTGTTGTACA +
Preference number: 4 (lower is better)
Translates to: KTTHAEDLAQSRPLVTGARTPRT*RQHCCT
Trigger: TGTACAACAATGCTGACGGCATGTACGAGGTGTCCT...AGCTCCTGTTACTAAGGGTCTGCTCTGCGCCAGGTCCTCAGCATGCGTTGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp TCAAACAGCAGACAAGCTCTAGGCCTGTTTACTCGTGTGTTAACCGGGTCATGGGCGGCAGCCAGAAGATaGTGCCATCATAGGAGACCA +
Preference number: 4 (lower is better)
Translates to: SNSRQALGLFTRVLTGSWAAARR*CHHRRP
Trigger: TGGTCTCCTATGATGGCAGCATCTTCTGGCTGCCGC...CCATGACCCGGTTAACACACGAGTAAACAGGCCTAGAGCTTGTCTGCTGTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp GCTTCCCTGACATCAAGAGAAGAGGACGACACACGACCCAAGGGTGGAAGAGACGTCCTTCCCAAGTTCTaGTTCAAAGCTGCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: ASLTSREEDDTRPKGGRDVLPKF*FKAAQV
Trigger: AACCTGAGCAGCTTTGAAGCAGAACTTGGGAAGGAC...GTCTCTTCCACCCTTGGGTCGTGTGTCGTCCTCTTCTCTTGATGTCAGGGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp TCAAACAGCAGACAAGCTCTAGGCCTGTTTACTCGTGTGTTAACCGGGTCATGGAGGAAGCCGAGGCTATaGTTTCTGAGGTGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: SNSRQALGLFTRVLTGSWRKPRL*FLRCRW
Trigger: CCAGCGACACCTCAGAAAGCATAGCCTCGGCTTCCT...CCATGACCCGGTTAACACACGAGTAAACAGGCCTAGAGCTTGTCTGCTGTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp CCCTCCCTGTTTCCTCTTCCGTTTCAAGACCATTGGGGGAAACGGTCTTGCCCTCTTTTTCACAAGCACTaGCTTATCCTCCCAGCAACC +
Preference number: 4 (lower is better)
Translates to: PSLFPLPFQDHWGKRSCPLFHKH*LILPAT
Trigger: GGTTGCTGGGAGGATAAGGCAGTGCTTGTGAAAAAG...AGGGCAAGACCGTTTCCCCCAATGGTCTTGAAACGGAAGAGGAAACAGGGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp TCACCTCTTCCTTATTGTGATGGTTCCCAAAGGGCTGCGTACAGAGATGGAGGGTGGTTCCCAAAGGGCTaGGTACAGAGATGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: SPLPYCDGSQRAAYRDGGWFPKG*VQRWRE
Trigger: TTCCCTCCATCTCTGTACGCAGCCCTTTGGGAACCA...CCCTCCATCTCTGTACGCAGCCCTTTGGGAACCATCACAATAAGGAAGAGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp TGCAACGCCACCTGTCAAAAGCAGAGAGCCTGTGCATGCCTTCTTTTCAGACAAGCTTCCTCCAGTCCTTaGCCAGCATTAAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: CNATCQKQRACACLLFRQASSSP*PALSWA
Trigger: TGCCCAGCTTAATGCTGGGCAAGGACTGGAGGAAGC...TTGTCTGAAAAGAAGGCATGCACAGGCTCTCTGCTTTTGACAGGTGGCGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp GTAGCCTTCCTCAGTAGAACACACCACCTGGGGGCTGCTGTGTCTTGTTTGCTTACACCACCTGGGGGCTaGTGTGTCTTGTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: VAFLSRTHHLGAAVSCLLTPPGG*CVLFAF
Trigger: AAAAGCAAACAAGACACAGCAGCCCCCAGGTGGTGT...AAGCAAACAAGACACAGCAGCCCCCAGGTGGTGTGTTCTACTGAGGAAGGCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp TGTTTCCTCTTCCGTTTCAAGACCATTGGGGGAAACGGTCTTGCCCTTCCTCTGCAGTCCCTTAGGAACTaGGTGGCTATCACACTGACC +
Preference number: 4 (lower is better)
Translates to: CFLFRFKTIGGNGLALPLQSLRN*VAITLT
Trigger: GGTCAGTGTGATAGCCACGCAGTTCCTAAGGGACTG...CAGAGGAAGGGCAAGACCGTTTCCCCCAATGGTCTTGAAACGGAAGAGGAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp GGCTATAGCAAGAGTGTGGACTTTGGGGTTCAGGCCCAGCACTACTCACTAGCTGCAGGAACATGCCGATaGTGCCAAAGACACAGACAA +
Preference number: 4 (lower is better)
Translates to: GYSKSVDFGVQAQHYSLAAGTCR*CQRHRQ
Trigger: TTGTCTGTGTCTTTGGCACCATCGGCATGTTCCTGC...AGCTAGTGAGTAGTGCTGGGCCTGAACCCCAAAGTCCACACTCTTGCTATAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp TCACCTCTTCCTTATTGTGATGGTTCCCAAAGGGCTGCGTACAGAGATGGAGGGCTGAGTGGAGGAAGGTaGTGGTGGTGTAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SPLPYCDGSQRAAYRDGGLSGGR*WWCSSG
Trigger: TCCAGAACTACACCACCACCACCTTCCTCCACTCAG...CCCTCCATCTCTGTACGCAGCCCTTTGGGAACCATCACAATAAGGAAGAGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp GAGGACCTGGCGCAGAGCAGACCCTTAGTAACAGGAGCTAATACTGGGATACAACTGAGTGGAGGAAGGTaGTGGTGGTGTAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: EDLAQSRPLVTGANTGIQLSGGR*WWCSSG
Trigger: TCCAGAACTACACCACCACCACCTTCCTCCACTCAG...TTGTATCCCAGTATTAGCTCCTGTTACTAAGGGTCTGCTCTGCGCCAGGTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp AGCCAAAACAAAGCAGTTGGTCCAGCCTCCAGGTTGGAGCTGCTGTGTGTGGATCCAAAACAAAGCAGTTaGTCCAGCCTCCAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: SQNKAVGPASRLELLCVDPKQSS*SSLQVG
Trigger: TCCAACCTGGAGGCTGGACCAACTGCTTTGTTTTGG...ATCCACACACAGCAGCTCCAACCTGGAGGCTGGACCAACTGCTTTGTTTTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp GCTGTTCTAGTATTTCTATCTCCCCGCCAGGAAGCTGCCTTCCTCCCACTGCAATCTTCTCCCATGACTTaGAGGCAGCAGACAATCCTG +
Preference number: 4 (lower is better)
Translates to: AVLVFLSPRQEAAFLPLQSSPMT*RQQTIL
Trigger: CAGGATTGTCTGCTGCCTCCAAGTCATGGGAGAAGA...TTGCAGTGGGAGGAAGGCAGCTTCCTGGCGGGGAGATAGAAATACTAGAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp TCCAGATCTGGAGCTTCCTCCAGTCCTTGCCCAGCATTAAGCTGGGCACCCGATTGTGGACAAAGAGGCTaGGTTGGCTTAAAGCTAACA +
Preference number: 4 (lower is better)
Translates to: SRSGASSSPCPALSWAPDCGQRG*VGLKLT
Trigger: TGTTAGCTTTAAGCCAACCCAGCCTCTTTGTCCACA...ATCGGGTGCCCAGCTTAATGCTGGGCAAGGACTGGAGGAAGCTCCAGATCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp TACTCTGGCTTGGGGAGTGATTCAGAGAAGGCTTTGAATGCCCCTTACTTTCCTCACACGACCCAAGGGTaGAAGAGACTGTGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: YSGLGSDSEKALNAPYFPHTTQG*KRLWFP
Trigger: GGGGAACCACAGTCTCTTCCACCCTTGGGTCGTGTG...AGGAAAGTAAGGGGCATTCAAAGCCTTCTCTGAATCACTCCCCAAGCCAGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp CTTGCCATCTCTGATGGAGATAGTCTCAACCTGTTTCCTCACTTCCCCTCCCAATGCCCAGCATTAAGCTaGGCACCCGATTCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LAISDGDSLNLFPHFPSQCPALS*APDSLQ
Trigger: CTGCAGAGAATCGGGTGCCCAGCTTAATGCTGGGCA...TTGGGAGGGGAAGTGAGGAAACAGGTTGAGACTATCTCCATCAGAGATGGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp TTAGCAGCCTTGCTCCCCTCCTCAACACTATTGCCTGGGCTGGTACAAGAGATGATCACACTGACCGCCTaGACCTGTTGGGATGAATAC +
Preference number: 4 (lower is better)
Translates to: LAALLPSSTLLPGLVQEMITLTA*TCWDEY
Trigger: GTATTCATCCCAACAGGTCCAGGCGGTCAGTGTGAT...CATCTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGGGGAGCAAGGCTGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp TCACCTCTTCCTTATTGTGATGGTTCCCAAAGGGCTGCGTACAGAGATGGAGGGAATCCGCTCATCTGCTaGCCTCTGGAAGCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: SPLPYCDGSQRAAYRDGGNPLIC*PLEAES
Trigger: TGACTCTGCTTCCAGAGGCCAGCAGATGAGCGGATT...CCCTCCATCTCTGTACGCAGCCCTTTGGGAACCATCACAATAAGGAAGAGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636034.1
CDS-3UTR GCA 90 bp CACTGCAACGCCACCTGTCAAAAGCAGAGAGCCTGTGCATGCCTTCTTTTCAGAGGAGGCTTTTCCGGCTaGTCTTCCAGGGAATACAAT +
Preference number: 4 (lower is better)
Translates to: HCNATCQKQRACACLLFRGGFSG*SSREYN
Trigger: ATTGTATTCCCTGGAAGAGCAGCCGGAAAAGCCTCC...TCTGAAAAGAAGGCATGCACAGGCTCTCTGCTTTTGACAGGTGGCGTTGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp AGCCAAAACAAAGCAGTTGGTCCAGCCTCCAGGTTGGAGCTGCTGTGTGTGGATGAGAAACCAGCTTCTTaGCTATCCTGGTATGAGCAG +
Preference number: 4 (lower is better)
Translates to: SQNKAVGPASRLELLCVDEKPAS*LSWYEQ
Trigger: CTGCTCATACCAGGATAGGCAAGAAGCTGGTTTCTC...ATCCACACACAGCAGCTCCAACCTGGAGGCTGGACCAACTGCTTTGTTTTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR GCA 90 bp CCCTCCTCAACACTATTGCCTGGGCTGGTACAAGAGATGGAGAGCAGCCAAAACGGAACATGCCGATGGTaGCAAAGACACAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: PSSTLLPGLVQEMESSQNGTCRW*QRHRQR
Trigger: TCTTTGTCTGTGTCTTTGGCACCATCGGCATGTTCC...GTTTTGGCTGCTCTCCATCTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR GCA 90 bp AACAGCAGACAAGCTCTAGGCCTGTTTACTCGTGTGTTAACCGGGTCATGGAGAGGGAAGTCCAGAGGGTaGAGAATTCTTCAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: NSRQALGLFTRVLTGSWRGKSRG*RILQWG
Trigger: TCCCCACTGAAGAATTCTGCACCCTCTGGACTTCCC...TCTCCATGACCCGGTTAACACACGAGTAAACAGGCCTAGAGCTTGTCTGCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp CCCCTTGCCCATCACTCCTCAGGGTGGATGGCTCTGCCATCTCTGTCTTCCACTGTCAGTTTCTTCATCTaGAACATGGCTTATGTTGGA +
Preference number: 4 (lower is better)
Translates to: PLAHHSSGWMALPSLSSTVSFFI*NMAYVG
Trigger: TCCAACATAAGCCATGTTGCAGATGAAGAAACTGAC...AGTGGAAGACAGAGATGGCAGAGCCATCCACCCTGAGGAGTGATGGGCAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp GTAGCCTTCCTCAGTAGAACACACCACCTGGGGGCTGCTGTGTCTTGTTTGCTTAGGCTCCTTTCCTGTTaGTGTTTCTGGTTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: VAFLSRTHHLGAAVSCLLRLLSC*CFWFQD
Trigger: GTCTTGGAACCAGAAACAGCAACAGGAAAGGAGCCT...AAGCAAACAAGACACAGCAGCCCCCAGGTGGTGTGTTCTACTGAGGAAGGCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp AGCAGCCTTGCTCCCCTCCTCAACACTATTGCCTGGGCTGGTACAAGAGATGGAAGAGAAGGCTTTGAATaGCCCTTACTTTCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: SSLAPLLNTIAWAGTRDGREGFE*PLLSSQ
Trigger: TTGGGAGGAAAGTAAGGGGCATTCAAAGCCTTCTCT...TCCATCTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGGGGAGCAAGGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp TCAAGAGAAGAGGACGACACACGACCCAAGGGTGGAAGAGACTGTGGTTCCCCAAGAGAAGGCTTTGAATaGCCCTTACTTTCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: SREEDDTRPKGGRDCGSPREGFE*PLLSSQ
Trigger: TTGGGAGGAAAGTAAGGGGCATTCAAAGCCTTCTCT...TGGGGAACCACAGTCTCTTCCACCCTTGGGTCGTGTGTCGTCCTCTTCTCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp ATAGTTCTCAGATCACCTGTGGCCTTGCCATCTCTGATGGAGATAGTCTCAACCGGATGGTATGACACCTaGCTGACTCTGCCCGGAAAC +
Preference number: 4 (lower is better)
Translates to: IVLRSPVALPSLMEIVSTGWYDT*LTLPGN
Trigger: GTTTCCGGGCAGAGTCAGGCAGGTGTCATACCATCC...GGTTGAGACTATCTCCATCAGAGATGGCAAGGCCACAGGTGATCTGAGAACTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp ATTGCCTGGGCTGGTACAAGAGATGGAGAGCAGCCAAAACAAAGCAGTTGGTCCAGTAGGCTAGACCAGTaGAAATACTCCAGGCGTGCA +
Preference number: 4 (lower is better)
Translates to: IAWAGTRDGEQPKQSSWSSRLDQ*KYSRRA
Trigger: TGCACGCCTGGAGTATTTGCACTGGTCTAGCCTACT...GGACCAACTGCTTTGTTTTGGCTGCTCTCCATCTCTTGTACCAGCCCAGGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp CTTGCCATCTCTGATGGAGATAGTCTCAACCTGTTTCCTCACTTCCCCTCCCAATTCACCTCAGCTCTGTaGTTGTCTCACCGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: LAISDGDSLNLFPHFPSQFTSAL*LSHRVG
Trigger: ACCCACACGGTGAGACAAGCACAGAGCTGAGGTGAA...TTGGGAGGGGAAGTGAGGAAACAGGTTGAGACTATCTCCATCAGAGATGGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636034.1
CDS-3UTR CCA 90 bp TGCCACCTCCAGATCTGGAGCTTCCTCCAGTCCTTGCCCAGCATTAAGCTGGGCGTTCTGCTGGTCAAATaGGAAGTGCTTTACTTCAAT +
Preference number: 4 (lower is better)
Translates to: CHLQIWSFLQSLPSIKLGVLLVK*EVLYFN
Trigger: ATTGAAGTAAAGCACTTCCCATTTGACCAGCAGAAC...GCCCAGCTTAATGCTGGGCAAGGACTGGAGGAAGCTCCAGATCTGGAGGTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp CTATTGCCTGGGCTGGTACAAGAGATGGAGAGCAGCCAAAACAAAGCAGTTGGTACTCCTCAGGGTGGATaGCTCTGCCATCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: LLPGLVQEMESSQNKAVGTPQGG*LCHLCL
Trigger: AAGACAGAGATGGCAGAGCCATCCACCCTGAGGAGT...ACCAACTGCTTTGTTTTGGCTGCTCTCCATCTCTTGTACCAGCCCAGGCAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp CGGGTCATGGAGAGGAGCTGGACAAGCTGCTCTCTGCCATCCCCTCTAGCACCATTATGTTGGAATCCATaGCTGTACAAAGTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: RVMERSWTSCSLPSPLAPLCWNP*LYKVLP
Trigger: TGGAAGAACTTTGTACAGCCATGGATTCCAACATAA...TGGTGCTAGAGGGGATGGCAGAGAGCAGCTTGTCCAGCTCCTCTCCATGACCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp TGCCACCTCCAGATCTGGAGCTTCCTCCAGTCCTTGCCCAGCATTAAGCTGGGCTCTTCATCTGCAACATaGCTTATGTTGGAATCCATG +
Preference number: 4 (lower is better)
Translates to: CHLQIWSFLQSLPSIKLGSSSAT*LMLESM
Trigger: CATGGATTCCAACATAAGCCATGTTGCAGATGAAGA...GCCCAGCTTAATGCTGGGCAAGGACTGGAGGAAGCTCCAGATCTGGAGGTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp GAGGACCTGGCGCAGAGCAGACCCTTAGTAACAGGAGCTAATACTGGGATACAAGCTTGTCTCACCGTGTaGGTCAGTTTCTTCATCTGC +
Preference number: 4 (lower is better)
Translates to: EDLAQSRPLVTGANTGIQACLTV*VSFFIC
Trigger: GCAGATGAAGAAACTGACCCACACGGTGAGACAAGC...TTGTATCCCAGTATTAGCTCCTGTTACTAAGGGTCTGCTCTGCGCCAGGTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp ATCAAGAGAAGAGGACGACACACGACCCAAGGGTGGAAGAGACTGTGGTTCCCCACAAAGAGGCTGGGTTaGCTTAAAGCTAACATCCTC +
Preference number: 4 (lower is better)
Translates to: IKRRGRHTTQGWKRLWFPTKRLG*LKANIL
Trigger: GAGGATGTTAGCTTTAAGCCAACCCAGCCTCTTTGT...GGGGAACCACAGTCTCTTCCACCCTTGGGTCGTGTGTCGTCCTCTTCTCTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp AGCTGGACAAGCTGCTCTCTGCCATCCCCTCTAGCACCATTTGGTGACTTAACTCTGATAAGGGAGACTTaGTTTCCTCAGGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: SWTSCSLPSPLAPFGDLTLIRET*FPQGRG
Trigger: CCCTCTTCCCTGAGGAAACCAAGTCTCCCTTATCAG...AGTTAAGTCACCAAATGGTGCTAGAGGGGATGGCAGAGAGCAGCTTGTCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp AAACAGCAGACAAGCTCTAGGCCTGTTTACTCGTGTGTTAACCGGGTCATGGAGGCTATAGCAAGAGTGTaGACTTTGGGGTTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: KQQTSSRPVYSCVNRVMEAIARV*TLGFRP
Trigger: GGGCCTGAACCCCAAAGTCCACACTCTTGCTATAGC...CTCCATGACCCGGTTAACACACGAGTAAACAGGCCTAGAGCTTGTCTGCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR TCA 90 bp TACTCTGGCTTGGGGAGTGATTCAGAGAAGGCTTTGAATGCCCCTTACTTTCCTGATGAGCTGGGCCAGTaGCACCATAAGCTGTACTGT +
Preference number: 4 (lower is better)
Translates to: YSGLGSDSEKALNAPYFPDELGQ*HHKLYC
Trigger: ACAGTACAGCTTATGGTGTCACTGGCCCAGCTCATC...AGGAAAGTAAGGGGCATTCAAAGCCTTCTCTGAATCACTCCCCAAGCCAGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp CACTGCAACGCCACCTGTCAAAAGCAGAGAGCCTGTGCATGCCTTCTTTTCAGAGGAACATGCCGATGGTaGCAAAGACACAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: HCNATCQKQRACACLLFRGTCRW*QRHRQR
Trigger: TCTTTGTCTGTGTCTTTGGCACCATCGGCATGTTCC...TCTGAAAAGAAGGCATGCACAGGCTCTCTGCTTTTGACAGGTGGCGTTGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp TCAGGCCCAGCACTACTCACTAGCTGTCACTTGGTCTTTCTGAGCCGCATTTCTGTTCTGCTTCAAAGCTaGTCAGGTTTGGTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SGPALLTSCHLVFLSRISVLLQS*SGLVGK
Trigger: CTTCCCAACCAAACCTGAGCAGCTTTGAAGCAGAAC...AGAAATGCGGCTCAGAAAGACCAAGTGACAGCTAGTGAGTAGTGCTGGGCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp TCACCTCTTCCTTATTGTGATGGTTCCCAAAGGGCTGCGTACAGAGATGGAGGGGTCCTTCCCAAGTTCTaGTTCAAAGCTGCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: SPLPYCDGSQRAAYRDGGVLPKF*FKAAQV
Trigger: AACCTGAGCAGCTTTGAAGCAGAACTTGGGAAGGAC...CCCTCCATCTCTGTACGCAGCCCTTTGGGAACCATCACAATAAGGAAGAGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp TCACCTCTTCCTTATTGTGATGGTTCCCAAAGGGCTGCGTACAGAGATGGAGGGTCAGGAAGAGGGCATTaGCACCTACGTTTTATAGGC +
Preference number: 4 (lower is better)
Translates to: SPLPYCDGSQRAAYRDGGSGRGH*HLRFIG
Trigger: GCCTATAAAACGTAGGTGGCAATGCCCTCTTCCTGA...CCCTCCATCTCTGTACGCAGCCCTTTGGGAACCATCACAATAAGGAAGAGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp ATAGTTCTCAGATCACCTGTGGCCTTGCCATCTCTGATGGAGATAGTCTCAACCCCTAATACTCAGCCTTaGCCCCCACACCTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: IVLRSPVALPSLMEIVSTPNTQP*PPHLEL
Trigger: AAGCTCAAGGTGTGGGGGGCAAGGCTGAGTATTAGG...GGTTGAGACTATCTCCATCAGAGATGGCAAGGCCACAGGTGATCTGAGAACTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636034.1
CDS-3UTR CCA 90 bp TCAAACAGCAGACAAGCTCTAGGCCTGTTTACTCGTGTGTTAACCGGGTCATGGGTACAGGACCACATCTaGGAGCCAGATGTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: SNSRQALGLFTRVLTGSWVQDHI*EPDVFG
Trigger: TCCAAACACATCTGGCTCCCAGATGTGGTCCTGTAC...CCATGACCCGGTTAACACACGAGTAAACAGGCCTAGAGCTTGTCTGCTGTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp TCAAACAGCAGACAAGCTCTAGGCCTGTTTACTCGTGTGTTAACCGGGTCATGGAGGAGACCACGGCATTaGAATAGAAGGACACCTCGT +
Preference number: 4 (lower is better)
Translates to: SNSRQALGLFTRVLTGSWRRPRH*NRRTPR
Trigger: ACGAGGTGTCCTTCTATTCCAATGCCGTGGTCTCCT...CCATGACCCGGTTAACACACGAGTAAACAGGCCTAGAGCTTGTCTGCTGTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp TACTCTGGCTTGGGGAGTGATTCAGAGAAGGCTTTGAATGCCCCTTACTTTCCTGGTTCAGCCCAGGAATaGAATGAAACTGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: YSGLGSDSEKALNAPYFPGSAQE*NETAEG
Trigger: CCCCTCAGCAGTTTCATTCCATTCCTGGGCTGAACC...AGGAAAGTAAGGGGCATTCAAAGCCTTCTCTGAATCACTCCCCAAGCCAGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp TCAAGAGAAGAGGACGACACACGACCCAAGGGTGGAAGAGACTGTGGTTCCCCATTTGGTGACTTAACTTaGACAACAGCCATGTATGGG +
Preference number: 4 (lower is better)
Translates to: SREEDDTRPKGGRDCGSPFGDLT*TTAMYG
Trigger: CCCATACATGGCTGTTGTCCAAGTTAAGTCACCAAA...TGGGGAACCACAGTCTCTTCCACCCTTGGGTCGTGTGTCGTCCTCTTCTCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp CTCTGCTGTGGACAAAGAGGCTGGGTTGGCTTAAAGCTAACATCCTCAGTTCACCTAATGAGTCTGACCTaGAGTAGGCTAGACCAGTGC +
Preference number: 4 (lower is better)
Translates to: LCCGQRGWVGLKLTSSVHLMSLT*SRLDQC
Trigger: GCACTGGTCTAGCCTACTCCAGGTCAGACTCATTAG...GTGAACTGAGGATGTTAGCTTTAAGCCAACCCAGCCTCTTTGTCCACAGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
3UTR CAA 72 bp ATGACAGTCAGGGGACCCCATTCTCACCAGCTCCAGTaGCCTGTCAGACTCAACATTCATGAAGCATCTACT +
Preference number: 4 (lower is better)
Translates to: MTVRGPHSHQLQ*PVRLNIHEAST
Trigger: AGTAGATGCTTCATGAATGTTGAGTCTGACAGGCAACTGGAGCTGGTGAGAATGGGGTCCCCTGACTGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR TCA 90 bp GAGGACCTGGCGCAGAGCAGACCCTTAGTAACAGGAGCTAATACTGGGATACAAAGTTCCAAAAGCCCATaGACTTGGACTTCTCACAGA +
Preference number: 4 (lower is better)
Translates to: EDLAQSRPLVTGANTGIQSSKSP*TWTSHR
Trigger: TCTGTGAGAAGTCCAAGTTCATGGGCTTTTGGAACT...TTGTATCCCAGTATTAGCTCCTGTTACTAAGGGTCTGCTCTGCGCCAGGTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR TCA 90 bp TGCAACGCCACCTGTCAAAAGCAGAGAGCCTGTGCATGCCTTCTTTTCAGACAACTGGACCTGTTGGGATaGATACTAAAAGGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: CNATCQKQRACACLLFRQLDLLG*ILKGGC
Trigger: ACAGCCACCTTTTAGTATTCATCCCAACAGGTCCAG...TTGTCTGAAAAGAAGGCATGCACAGGCTCTCTGCTTTTGACAGGTGGCGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR TCA 90 bp AGCAGCCTTGCTCCCCTCCTCAACACTATTGCCTGGGCTGGTACAAGAGATGGATCTTTACGAGAATCTTaGGTTCCTAATGAGTCTGAC +
Preference number: 4 (lower is better)
Translates to: SSLAPLLNTIAWAGTRDGSLRES*VPNESD
Trigger: GTCAGACTCATTAGGAACTCAAGATTCTCGTAAAGA...TCCATCTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGGGGAGCAAGGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR TCA 90 bp GGCTATAGCAAGAGTGTGGACTTTGGGGTTCAGGCCCAGCACTACTCACTAGCTAACCCCCAAATAGAGTaGCAAGACAACTTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: GYSKSVDFGVQAQHYSLANPQIE*QDNFGN
Trigger: GTTTCCAAAGTTGTCTTGTCACTCTATTTGGGGGTT...AGCTAGTGAGTAGTGCTGGGCCTGAACCCCAAAGTCCACACTCTTGCTATAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp CACTATTGCCTGGGCTGGTACAAGAGATGGAGAGCAGCCAAAACAAAGCAGTTGGTTCTGCTTCAAAGCTaGTCAGGTTTGGTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: HYCLGWYKRWRAAKTKQLVLLQS*SGLVGK
Trigger: CTTCCCAACCAAACCTGAGCAGCTTTGAAGCAGAAC...CAACTGCTTTGTTTTGGCTGCTCTCCATCTCTTGTACCAGCCCAGGCAATAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR GCA 90 bp TGTTTCCTCTTCCGTTTCAAGACCATTGGGGGAAACGGTCTTGCCCTTCCTCTGAAAGCAGAGAGCCTGTaGATGCCTTCTTTTCAGACA +
Preference number: 4 (lower is better)
Translates to: CFLFRFKTIGGNGLALPLKAESL*MPSFQT
Trigger: TGTCTGAAAAGAAGGCATGCACAGGCTCTCTGCTTT...CAGAGGAAGGGCAAGACCGTTTCCCCCAATGGTCTTGAAACGGAAGAGGAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR GCA 90 bp CTTCTCACAGATTTCAAGTATTTGGACCTGAGACTCCAAGCAGGTCACCCAAAGCAGTCCCTTAGGAACTaGGTGGCTATCACACTGACC +
Preference number: 4 (lower is better)
Translates to: LLTDFKYLDLRLQAGHPKQSLRN*VAITLT
Trigger: GGTCAGTGTGATAGCCACGCAGTTCCTAAGGGACTG...CTTTGGGTGACCTGCTTGGAGTCTCAGGTCCAAATACTTGAAATCTGTGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp AGAGCAGCCAAAACAAAGCAGTTGGTCCAGCCTCCAGGTTGGAGCTGCTGTGTGGTTCTGCTGGTCAAATaGGAAGTGCTTTACTTCAAT +
Preference number: 4 (lower is better)
Translates to: RAAKTKQLVQPPGWSCCVVLLVK*EVLYFN
Trigger: ATTGAAGTAAAGCACTTCCCATTTGACCAGCAGAAC...CACACAGCAGCTCCAACCTGGAGGCTGGACCAACTGCTTTGTTTTGGCTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CCA 90 bp CTCTGCTGTGGACAAAGAGGCTGGGTTGGCTTAAAGCTAACATCCTCAGTTCACTGCAGAATTCTTCAGTaGGGAAAGAGGATCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LCCGQRGWVGLKLTSSVHCRILQ*GKRIWS
Trigger: GCTCCAGATCCTCTTTCCCCACTGAAGAATTCTGCA...GTGAACTGAGGATGTTAGCTTTAAGCCAACCCAGCCTCTTTGTCCACAGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp CTTCTGCCTGCCTCAGCGGCTATAGCAAGAGTGTGGACTTTGGGGTTCAGGCCCGACAACAGCCATGTATaGGAAATATTAAAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: LLPASAAIARVWTLGFRPDNSHV*EILKAS
Trigger: ACTTGCTTTTAATATTTCCCATACATGGCTGTTGTC...GGGCCTGAACCCCAAAGTCCACACTCTTGCTATAGCCGCTGAGGCAGGCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp CTTCTCACAGATTTCAAGTATTTGGACCTGAGACTCCAAGCAGGTCACCCAAAGTCATCTGCTGGCCTCTaGAAGCAGAGTCAGGGTACA +
Preference number: 4 (lower is better)
Translates to: LLTDFKYLDLRLQAGHPKSSAGL*KQSQGT
Trigger: TGTACCCTGACTCTGCTTCCAGAGGCCAGCAGATGA...CTTTGGGTGACCTGCTTGGAGTCTCAGGTCCAAATACTTGAAATCTGTGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636034.1
CDS-3UTR TCA 90 bp GCCCAGGTAACCCTTTCATATACACTGACCCCTTTCTTCCTTGCTGAAGACCTCATTCAGAGAAGGCTTTaGATGCCCCTTACTTTCCTC +
Preference number: 4 (lower is better)
Translates to: AQVTLSYTLTPFFLAEDLIQRRL*MPLTFL
Trigger: GAGGAAAGTAAGGGGCATTCAAAGCCTTCTCTGAAT...GAGGTCTTCAGCAAGGAAGAAAGGGGTCAGTGTATATGAAAGGGTTACCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp AGGCATAGGGGCTTCCCTGACATCAAGAGAAGAGGACGACACACGACCCAAGGGGACAACAGCCATGTATaGGAAATATTAAAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: RHRGFPDIKRRGRHTTQGDNSHV*EILKAS
Trigger: ACTTGCTTTTAATATTTCCCATACATGGCTGTTGTC...CCCTTGGGTCGTGTGTCGTCCTCTTCTCTTGATGTCAGGGAAGCCCCTATGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp AGCTGGACAAGCTGCTCTCTGCCATCCCCTCTAGCACCATTTGGTGACTTAACTGTTCTGCTGGTCAAATaGGAAGTGCTTTACTTCAAT +
Preference number: 4 (lower is better)
Translates to: SWTSCSLPSPLAPFGDLTVLLVK*EVLYFN
Trigger: ATTGAAGTAAAGCACTTCCCATTTGACCAGCAGAAC...AGTTAAGTCACCAAATGGTGCTAGAGGGGATGGCAGAGAGCAGCTTGTCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp TTCAGGCATAATACAGGCAACTCCCAATCCGCTCATCTGCTGGCCTCTGGAAGCTTATGTTGGAATCCATaGCTGTACAAAGTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: FRHNTGNSQSAHLLASGSLCWNP*LYKVLP
Trigger: TGGAAGAACTTTGTACAGCCATGGATTCCAACATAA...GCTTCCAGAGGCCAGCAGATGAGCGGATTGGGAGTTGCCTGTATTATGCCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636034.1
3UTR CAA 72 bp GCCCATGAACTTGGACTTCTCACAGATTTCAAGTATTaGGACCTGAGACTCCAAGCAGGTCACCCAAAGATT +
Preference number: 4 (lower is better)
Translates to: AHELGLLTDFKY*DLRLQAGHPKI
Trigger: AATCTTTGGGTGACCTGCTTGGAGTCTCAGGTCCAAATACTTGAAATCTGTGAGAAGTCCAAGTTCATGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CCA 90 bp TTCTTCCAGTTCCAAAAGCCCATGAACTTGGACTTCTCACAGATTTCAAGTATTTCCTGTTGCTGTTTCTaGTTCCAAGACGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: FFQFQKPMNLDFSQISSISCCCF*FQDAFP
Trigger: GGGGAAGGCGTCTTGGAACCAGAAACAGCAACAGGA...AATACTTGAAATCTGTGAGAAGTCCAAGTTCATGGGCTTTTGGAACTGGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp TTCTTCCAGTTCCAAAAGCCCATGAACTTGGACTTCTCACAGATTTCAAGTATTGTAGAACACACCACCTaGGGGCTGCTGTGTCTTGTT +
Preference number: 4 (lower is better)
Translates to: FFQFQKPMNLDFSQISSIVEHTT*GLLCLV
Trigger: AACAAGACACAGCAGCCCCCAGGTGGTGTGTTCTAC...AATACTTGAAATCTGTGAGAAGTCCAAGTTCATGGGCTTTTGGAACTGGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CCA 90 bp TTCTTCCAGTTCCAAAAGCCCATGAACTTGGACTTCTCACAGATTTCAAGTATTGGCTGGTACAAGAGATaGAGAGCAGCCAAAACAAAG +
Preference number: 4 (lower is better)
Translates to: FFQFQKPMNLDFSQISSIGWYKR*RAAKTK
Trigger: CTTTGTTTTGGCTGCTCTCCATCTCTTGTACCAGCC...AATACTTGAAATCTGTGAGAAGTCCAAGTTCATGGGCTTTTGGAACTGGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR TCA 90 bp TTCTTCCAGTTCCAAAAGCCCATGAACTTGGACTTCTCACAGATTTCAAGTATTTCTAGCACCATTTGGTaGCTTAACTTGGACAACAGC +
Preference number: 4 (lower is better)
Translates to: FFQFQKPMNLDFSQISSISSTIW*LNLDNS
Trigger: GCTGTTGTCCAAGTTAAGTCACCAAATGGTGCTAGA...AATACTTGAAATCTGTGAGAAGTCCAAGTTCATGGGCTTTTGGAACTGGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS GCA 90 bp TCCGTGGTGCTGAAGCCGCGCCCGCCTGGAGCTGGGTCCAGGTGGTaGCGGCCGCCGCGGTGGTTCCTGGGCCTCAGGGAGCCGGCTGCG +
Preference number: 5 (lower is better)
Translates to: SVVLKPRPPGAGSRW*RPPRWFLGLREPAA
Trigger: CGCAGCCGGCTCCCTGAGGCCCAGGAACCACCGCGGCGGCCGGCACCACCTGGACCCAGCTCCAGGCGGGCGCGGCTTCAGCACCACGGA
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368476.4
ENST00000636034.1
ENST00000637900.1
CDS GCA 90 bp GGCCGAAGCCAAGGAGCAGCGCCACGGGGCCGCAGCGCCGGGCCATaGCGCGGGCATAGCTCGCTGCCTCGCCTACACCGGCTGGAGCGC +
Preference number: 5 (lower is better)
Translates to: GRSQGAAPRGRSAGP*RGHSSLPRLHRLER
Trigger: GCGCTCCAGCCGGTGTAGGCGAGGCAGCGAGCTATGCCCGCGGCATGGCCCGGCGCTGCGGCCCCGTGGCGCTGCTCCTTGGCTTCGGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368476.4
ENST00000636034.1
ENST00000637900.1
CDS CCA 90 bp CCGCGCCCGCCTGGAGCTGGGTCCAGGTGGTGCCGGCCGCCGCGGTaGTTCCTGGGCCTCAGGGAGCCGGCTGCGAGGAGAAACCAGCTT +
Preference number: 5 (lower is better)
Translates to: PRPPGAGSRWCRPPR*FLGLREPAARRNQL
Trigger: AAGCTGGTTTCTCCTCGCAGCCGGCTCCCTGAGGCCCAGGAACCACCGCGGCGGCCGGCACCACCTGGACCCAGCTCCAGGCGGGCGCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368476.4
ENST00000636034.1
ENST00000637900.1
CDS CCA 90 bp CGCCTGGAGCTGGGTCCAGGTGGTGCCGGCCGCCGCGGTGGTTCCTaGGCCTCAGGGAGCCGGCTGCGAGGAGAAACCAGCTTCTTGCCT +
Preference number: 5 (lower is better)
Translates to: RLELGPGGAGRRGGS*ASGSRLRGETSFLP
Trigger: AGGCAAGAAGCTGGTTTCTCCTCGCAGCCGGCTCCCTGAGGCCCAGGAACCACCGCGGCGGCCGGCACCACCTGGACCCAGCTCCAGGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368476.4
ENST00000636034.1
ENST00000637900.1
CDS-3UTR CAA 90 bp CTACCATTGTGTCAGGCCAGCCCGGTGCGGTGTGAGCTCCTGCCCTTCCACCCCTCGTCGGGGTTCTCGTaGCGCCGGCCCGGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: LPLCQASPVRCELLPFHPSSGFS*RRPGSA
Trigger: GGCGCTGCCGGGCCGGCGCAACGAGAACCCCGACGA...GGGGTGGAAGGGCAGGAGCTCACACCGCACCGGGCTGGCCTGACACAATGGTAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS TCA 90 bp CACTCACGCTCTGGTCATCGTCCTCGCTCCGCATGTGGTCTGCGATaGAGCGCACGCCGTCCACCGCCTCCCGGAGGCCACAGCCACACG +
Preference number: 5 (lower is better)
Translates to: HSRSGHRPRSACGLR*SARRPPPPGGHSHT
Trigger: CGTGTGGCTGTGGCCTCCGGGAGGCGGTGGACGGCGTGCGCTTCATCGCAGACCACATGCGGAGCGAGGACGATGACCAGAGCGTGAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368476.4
ENST00000636034.1
ENST00000637900.1
CDS GCA 90 bp GTCCTCACTCACGCTCTGGTCATCGTCCTCGCTCCGCATGTGGTCTaGGATGAAGCGCACGCCGTCCACCGCCTCCCGGAGGCCACAGCC +
Preference number: 5 (lower is better)
Translates to: VLTHALVIVLAPHVV*DEAHAVHRLPEATA
Trigger: GGCTGTGGCCTCCGGGAGGCGGTGGACGGCGTGCGCTTCATCGCAGACCACATGCGGAGCGAGGACGATGACCAGAGCGTGAGTGAGGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368476.4
ENST00000636034.1
ENST00000637900.1
CDS TCA 90 bp GCAGGCGCAGGCGCTGACGGGCGCAATGATGGCGTGGCTGCTGCATaGAGAGCAGCGCGGGCAGCTTCTCCAGGAAGACGACCTTCACCC +
Preference number: 5 (lower is better)
Translates to: AGAGADGRNDGVAAA*RAARAASPGRRPSP
Trigger: GGGTGAAGGTCGTCTTCCTGGAGAAGCTGCCCGCGCTGCTCTTCATGCAGCAGCCACGCCATCATTGCGCCCGTCAGCGCCTGCGCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368476.4
ENST00000636034.1
ENST00000637900.1
CDS-3UTR CAA 90 bp CAGGCAACTCCCAATCCGCTCATCTGCTGGCCTCTGGAAGCAGAGTCAGGGTACTCGTCGGGGTTCTCGTaGCGCCGGCCCGGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: QATPNPLICWPLEAESGYSSGFS*RRPGSA
Trigger: GGCGCTGCCGGGCCGGCGCAACGAGAACCCCGACGA...GTACCCTGACTCTGCTTCCAGAGGCCAGCAGATGAGCGGATTGGGAGTTGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636034.1
CDS CCA 90 bp TTCCAGTCCTCACTCACGCTCTGGTCATCGTCCTCGCTCCGCATGTaGTCTGCGATGAAGCGCACGCCGTCCACCGCCTCCCGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: FQSSLTLWSSSSLRM*SAMKRTPSTASRRP
Trigger: TGGCCTCCGGGAGGCGGTGGACGGCGTGCGCTTCATCGCAGACCACATGCGGAGCGAGGACGATGACCAGAGCGTGAGTGAGGACTGGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368476.4
ENST00000636034.1
ENST00000637900.1
CDS-3UTR CAA 90 bp GGGGGCAGCGCCCCTCTTCCTGGTAGCTCACTCGTCCATCCTCCACCCAACACTCCCCTTCCTGGCCCCTaGCCCATCACTCCTCAGGGT +
Preference number: 5 (lower is better)
Translates to: GGSAPLPGSSLVHPPPNTPLPGP*PITPQG
Trigger: ACCCTGAGGAGTGATGGGCAAGGGGCCAGGAAGGGG...AGTGTTGGGTGGAGGATGGACGAGTGAGCTACCAGGAAGAGGGGCGCTGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CAA 90 bp CAGGAATCGCTGACCACTGTGGGGCCCACCCAGTCCAGCTGCTGTCCACTCAAGGAGGAAGGGCCTCACTaGGAGCTGGGGGCTGAGTGG +
Preference number: 5 (lower is better)
Translates to: QESLTTVGPTQSSCCPLKEEGPH*ELGAEW
Trigger: CCACTCAGCCCCCAGCTCCAAGTGAGGCCCTTCCTC...CTTGAGTGGACAGCAGCTGGACTGGGTGGGCCCCACAGTGGTCAGCGATTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CAA 90 bp AGGCCTCTCTCTTCCCCTCCCTTCAGAGCTACCATTGTGTCAGGCCAGCCCGGTGAGGAAGGGCCTCACTaGGAGCTGGGGGCTGAGTGG +
Preference number: 5 (lower is better)
Translates to: RPLSSPPFRATIVSGQPGEEGPH*ELGAEW
Trigger: CCACTCAGCCCCCAGCTCCAAGTGAGGCCCTTCCTC...ACCGGGCTGGCCTGACACAATGGTAGCTCTGAAGGGAGGGGAAGAGAGAGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CAA 90 bp CTACCATTGTGTCAGGCCAGCCCGGTGCGGTGTGAGCTCCTGCCCTTCCACCCCCCGGCTAAACCCTACTaGGCAGGAATCGCTGACCAC +
Preference number: 5 (lower is better)
Translates to: LPLCQASPVRCELLPFHPPAKPY*AGIADH
Trigger: GTGGTCAGCGATTCCTGCCAAGTAGGGTTTAGCCGG...GGGGTGGAAGGGCAGGAGCTCACACCGCACCGGGCTGGCCTGACACAATGGTAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CAA 90 bp GAGGACCTGGCGCAGAGCAGACCCTTAGTAACAGGAGCTAATACTGGGATACAATCGTCGGGGTTCTCGTaGCGCCGGCCCGGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: EDLAQSRPLVTGANTGIQSSGFS*RRPGSA
Trigger: GGCGCTGCCGGGCCGGCGCAACGAGAACCCCGACGA...TTGTATCCCAGTATTAGCTCCTGTTACTAAGGGTCTGCTCTGCGCCAGGTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS GCA 90 bp GTTCCTGGGCCTCAGGGAGCCGGCTGCGAGGAGAAACCAGCTTCTTaGCTATCCTGGTATGAGCAGGCGGAGGCTTTTCCGGCTGCTCTT +
Preference number: 5 (lower is better)
Translates to: VPGPQGAGCEEKPAS*LSWYEQAEAFPAAL
Trigger: AAGAGCAGCCGGAAAAGCCTCCGCCTGCTCATACCAGGATAGGCAAGAAGCTGGTTTCTCCTCGCAGCCGGCTCCCTGAGGCCCAGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CAA 90 bp GGGGGCAGCGCCCCTCTTCCTGGTAGCTCACTCGTCCATCCTCCACCCAACACTCCCTCCTCAACACTATaGCCTGGGCTGGTACAAGAG +
Preference number: 5 (lower is better)
Translates to: GGSAPLPGSSLVHPPPNTPSSTL*PGLVQE
Trigger: CTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGGG...AGTGTTGGGTGGAGGATGGACGAGTGAGCTACCAGGAAGAGGGGCGCTGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CAA 90 bp GGATGGATCTGTGGGGGCAGCGCCCCTCTTCCTGGTAGCTCACTCGTCCATCCTTCCCCTCCCAAACCCTaGCTCCAGGTTTCCATCCAG +
Preference number: 5 (lower is better)
Translates to: GWICGGSAPLPGSSLVHPSPPKP*LQVSIQ
Trigger: CTGGATGGAAACCTGGAGCAAGGGTTTGGGAGGGGA...AGGATGGACGAGTGAGCTACCAGGAAGAGGGGCGCTGCCCCCACAGATCCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS CCA 90 bp CCTCAGGGAGCCGGCTGCGAGGAGAAACCAGCTTCTTGCCTATCCTaGTATGAGCAGGCGGAGGCTTTTCCGGCTGCTCTTCCAGGGAAT +
Preference number: 5 (lower is better)
Translates to: PQGAGCEEKPASCLS*YEQAEAFPAALPGN
Trigger: ATTCCCTGGAAGAGCAGCCGGAAAAGCCTCCGCCTGCTCATACCAGGATAGGCAAGAAGCTGGTTTCTCCTCGCAGCCGGCTCCCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CAA 90 bp AGCTACCATTGTGTCAGGCCAGCCCGGTGCGGTGTGAGCTCCTGCCCTTCCACCATGCCGTCAGCATTGTaGTACAGGACCACATCTGGG +
Preference number: 5 (lower is better)
Translates to: SYHCVRPARCGVSSCPSTMPSAL*YRTTSG
Trigger: CCCAGATGTGGTCCTGTACAACAATGCTGACGGCAT...GGTGGAAGGGCAGGAGCTCACACCGCACCGGGCTGGCCTGACACAATGGTAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CAA 90 bp AGCTACCATTGTGTCAGGCCAGCCCGGTGCGGTGTGAGCTCCTGCCCTTCCACCTTCCACTTAGCAGCCTaGCTCCCCTCCTCAACACTA +
Preference number: 5 (lower is better)
Translates to: SYHCVRPARCGVSSCPSTFHLAA*LPSSTL
Trigger: TAGTGTTGAGGAGGGGAGCAAGGCTGCTAAGTGGAA...GGTGGAAGGGCAGGAGCTCACACCGCACCGGGCTGGCCTGACACAATGGTAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CAA 90 bp GGGGACAACTGGAACCAGGTCTACTCTGGCTTGGGGAGTGATTCAGAGAAGGCTCCCCTTCCTGGCCCCTaGCCCATCACTCCTCAGGGT +
Preference number: 5 (lower is better)
Translates to: GDNWNQVYSGLGSDSEKAPLPGP*PITPQG
Trigger: ACCCTGAGGAGTGATGGGCAAGGGGCCAGGAAGGGG...AGCCTTCTCTGAATCACTCCCCAAGCCAGAGTAGACCTGGTTCCAGTTGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CAA 90 bp CTGGCCCCTTGCCCATCACTCCTCAGGGTGGATGGCTCTGCCATCTCTGTCTTCCTGCCCTTCCACCCCTaGTCCTATACCCCTCTTCTC +
Preference number: 5 (lower is better)
Translates to: LAPCPSLLRVDGSAISVFLPFHP*SYTPLL
Trigger: GAGAAGAGGGGTATAGGACAAGGGGTGGAAGGGCAG...GAAGACAGAGATGGCAGAGCCATCCACCCTGAGGAGTGATGGGCAAGGGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CAA 90 bp GCTTCCCTGACATCAAGAGAAGAGGACGACACACGACCCAAGGGTGGAAGAGACCCCCACACCTTGAGCTaGGAGCTGGGGGCTGAGTGG +
Preference number: 5 (lower is better)
Translates to: ASLTSREEDDTRPKGGRDPHTLS*ELGAEW
Trigger: CCACTCAGCCCCCAGCTCCAAGCTCAAGGTGTGGGG...GTCTCTTCCACCCTTGGGTCGTGTGTCGTCCTCTTCTCTTGATGTCAGGGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000636034.1
CDS-3UTR CAA 90 bp TTCCTGGCCCCTTGCCCATCACTCCTCAGGGTGGATGGCTCTGCCATCTCTGTCGCCAAAACAAAGCAGTaGGTCCAGCCTCCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: FLAPCPSLLRVDGSAISVAKTKQ*VQPPGW
Trigger: CCAACCTGGAGGCTGGACCAACTGCTTTGTTTTGGC...GACAGAGATGGCAGAGCCATCCACCCTGAGGAGTGATGGGCAAGGGGCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CAA 90 bp GCCACCTCCAGATCTGGAGCTTCCTCCAGTCCTTGCCCAGCATTAAGCTGGGCACCGGCTAAACCCTACTaGGCAGGAATCGCTGACCAC +
Preference number: 5 (lower is better)
Translates to: ATSRSGASSSPCPALSWAPAKPY*AGIADH
Trigger: GTGGTCAGCGATTCCTGCCAAGTAGGGTTTAGCCGG...TGCCCAGCTTAATGCTGGGCAAGGACTGGAGGAAGCTCCAGATCTGGAGGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CAA 90 bp ATCTGTGGGGGCAGCGCCCCTCTTCCTGGTAGCTCACTCGTCCATCCTCCACCCGAGGCTCCTTTCCTGTaGCTGTTTCTGGTTCCAAGA +
Preference number: 5 (lower is better)
Translates to: ICGGSAPLPGSSLVHPPPEAPFL*LFLVPR
Trigger: TCTTGGAACCAGAAACAGCAACAGGAAAGGAGCCTC...GGGTGGAGGATGGACGAGTGAGCTACCAGGAAGAGGGGCGCTGCCCCCACAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CAA 90 bp AGGCCTCTCTCTTCCCCTCCCTTCAGAGCTACCATTGTGTCAGGCCAGCCCGGTAGCTTCCCAGTGCACTaGAGGGTTCACACTCTCCCA +
Preference number: 5 (lower is better)
Translates to: RPLSSPPFRATIVSGQPGSFPVH*RVHTLP
Trigger: TGGGAGAGTGTGAACCCTCAAGTGCACTGGGAAGCT...ACCGGGCTGGCCTGACACAATGGTAGCTCTGAAGGGAGGGGAAGAGAGAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CAA 90 bp ATCTGTGGGGGCAGCGCCCCTCTTCCTGGTAGCTCACTCGTCCATCCTCCACCCCTCACTAGCTGTCACTaGGTCTTTCTGAGCCGCATT +
Preference number: 5 (lower is better)
Translates to: ICGGSAPLPGSSLVHPPPLTSCH*VFLSRI
Trigger: AATGCGGCTCAGAAAGACCAAGTGACAGCTAGTGAG...GGGTGGAGGATGGACGAGTGAGCTACCAGGAAGAGGGGCGCTGCCCCCACAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CAA 90 bp CAGCCAGAAGGATGGAGCCATGAGCAGAACAGACTGGAGCAGCACGGATGTAGCCTGCCCTTCCACCCCTaGTCCTATACCCCTCTTCTC +
Preference number: 5 (lower is better)
Translates to: QPEGWSHEQNRLEQHGCSLPFHP*SYTPLL
Trigger: GAGAAGAGGGGTATAGGACAAGGGGTGGAAGGGCAG...GCTACATCCGTGCTGCTCCAGTCTGTTCTGCTCATGGCTCCATCCTTCTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CAA 90 bp ACCCGATTCTCTGCAGAGATAGCCCCACCACGGGAAGGAGGCATAGGGGCTTCCCCTGATAAGGGAGACTaGGTTTCCTCAGGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: TRFSAEIAPPREGGIGASPDKGD*VSSGKR
Trigger: CCTCTTCCCTGAGGAAACCAAGTCTCCCTTATCAGG...GGAAGCCCCTATGCCTCCTTCCCGTGGTGGGGCTATCTCTGCAGAGAATCGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CAA 90 bp ACTTGGCAGGAATCGCTGACCACTGTGGGGCCCACCCAGTCCAGCTGCTGTCCATACATGCCGTCAGCATaGTTGTACAGGACCACATCT +
Preference number: 5 (lower is better)
Translates to: TWQESLTTVGPTQSSCCPYMPSA*LYRTTS
Trigger: AGATGTGGTCCTGTACAACAATGCTGACGGCATGTA...TGGACAGCAGCTGGACTGGGTGGGCCCCACAGTGGTCAGCGATTCCTGCCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CAA 90 bp CACTATTGCCTGGGCTGGTACAAGAGATGGAGAGCAGCCAAAACAAAGCAGTTGTGCACCGACGCGCGGTaGACGAAGCACGTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: HYCLGWYKRWRAAKTKQLCTDAR*TKHVQE
Trigger: CTCCTGCACGTGCTTCGTCAACCGCGCGTCGGTGCA...CAACTGCTTTGTTTTGGCTGCTCTCCATCTCTTGTACCAGCCCAGGCAATAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CAA 90 bp TGCCACCTCCAGATCTGGAGCTTCCTCCAGTCCTTGCCCAGCATTAAGCTGGGCCAGGTCTACTCTGGCTaGGGGAGTGATTCAGAGAAG +
Preference number: 5 (lower is better)
Translates to: CHLQIWSFLQSLPSIKLGQVYSG*GSDSEK
Trigger: CTTCTCTGAATCACTCCCCAAGCCAGAGTAGACCTG...GCCCAGCTTAATGCTGGGCAAGGACTGGAGGAAGCTCCAGATCTGGAGGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CAA 90 bp GAGCAGCCAAAACAAAGCAGTTGGTCCAGCCTCCAGGTTGGAGCTGCTGTGTGTGGGAGCCAGATGTGTTaGGAAGGGAGCCGAACTTTC +
Preference number: 5 (lower is better)
Translates to: EQPKQSSWSSLQVGAAVCGSQMC*EGSRTF
Trigger: GAAAGTTCGGCTCCCTTCCAAACACATCTGGCTCCC...ACACACAGCAGCTCCAACCTGGAGGCTGGACCAACTGCTTTGTTTTGGCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CAA 90 bp ATTGCCTGGGCTGGTACAAGAGATGGAGAGCAGCCAAAACAAAGCAGTTGGTCCGGTCCAGCCTCCAGGTaGGAGCTGCTGTGTGTGGAT +
Preference number: 5 (lower is better)
Translates to: IAWAGTRDGEQPKQSSWSGPASR*ELLCVD
Trigger: ATCCACACACAGCAGCTCCAACCTGGAGGCTGGACC...GGACCAACTGCTTTGTTTTGGCTGCTCTCCATCTCTTGTACCAGCCCAGGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CAA 90 bp ATTGCCTGGGCTGGTACAAGAGATGGAGAGCAGCCAAAACAAAGCAGTTGGTCCCCTTCAGAGCTACCATaGTGTCAGGCCAGCCCGGTG +
Preference number: 5 (lower is better)
Translates to: IAWAGTRDGEQPKQSSWSPSELP*CQASPV
Trigger: CACCGGGCTGGCCTGACACAATGGTAGCTCTGAAGG...GGACCAACTGCTTTGTTTTGGCTGCTCTCCATCTCTTGTACCAGCCCAGGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CAA 90 bp ACTGGGATACAAACAGCCCCAGGTCCCCAAACCATCCAAAGAGCCCTCCCTGTTAGCTTCCCAGTGCACTaGAGGGTTCACACTCTCCCA +
Preference number: 5 (lower is better)
Translates to: TGIQTAPGPQTIQRALPVSFPVH*RVHTLP
Trigger: TGGGAGAGTGTGAACCCTCAAGTGCACTGGGAAGCT...AACAGGGAGGGCTCTTTGGATGGTTTGGGGACCTGGGGCTGTTTGTATCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CAA 90 bp TCCCTGTTTCCTCTTCCGTTTCAAGACCATTGGGGGAAACGGTCTTGCCCTTCCAGCTTCCTCCAGTCCTaGCCCAGCATTAAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: SLFPLPFQDHWGKRSCPSSFLQS*PSIKLG
Trigger: GCCCAGCTTAATGCTGGGCAAGGACTGGAGGAAGCT...GGAAGGGCAAGACCGTTTCCCCCAATGGTCTTGAAACGGAAGAGGAAACAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CAA 90 bp GCTGTTCTAGTATTTCTATCTCCCCGCCAGGAAGCTGCCTTCCTCCCACTGCAATCCCCTCCCAAACCCTaGCTCCAGGTTTCCATCCAG +
Preference number: 5 (lower is better)
Translates to: AVLVFLSPRQEAAFLPLQSPPKP*LQVSIQ
Trigger: CTGGATGGAAACCTGGAGCAAGGGTTTGGGAGGGGA...TTGCAGTGGGAGGAAGGCAGCTTCCTGGCGGGGAGATAGAAATACTAGAACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CAA 90 bp GCTTCCCTGACATCAAGAGAAGAGGACGACACACGACCCAAGGGTGGAAGAGACATGCCGTCAGCATTGTaGTACAGGACCACATCTGGG +
Preference number: 5 (lower is better)
Translates to: ASLTSREEDDTRPKGGRDMPSAL*YRTTSG
Trigger: CCCAGATGTGGTCCTGTACAACAATGCTGACGGCAT...GTCTCTTCCACCCTTGGGTCGTGTGTCGTCCTCTTCTCTTGATGTCAGGGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CAA 90 bp CTTCTCACAGATTTCAAGTATTTGGACCTGAGACTCCAAGCAGGTCACCCAAAGTGCACCGACGCGCGGTaGACGAAGCACGTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: LLTDFKYLDLRLQAGHPKCTDAR*TKHVQE
Trigger: CTCCTGCACGTGCTTCGTCAACCGCGCGTCGGTGCA...CTTTGGGTGACCTGCTTGGAGTCTCAGGTCCAAATACTTGAAATCTGTGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CAA 90 bp AACAGCAGACAAGCTCTAGGCCTGTTTACTCGTGTGTTAACCGGGTCATGGAGATTGGGGGAAACGGTCTaGCCCTTCCTCTGCCGTAGC +
Preference number: 5 (lower is better)
Translates to: NSRQALGLFTRVLTGSWRLGETV*PFLCRS
Trigger: GCTACGGCAGAGGAAGGGCAAGACCGTTTCCCCCAA...TCTCCATGACCCGGTTAACACACGAGTAAACAGGCCTAGAGCTTGTCTGCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CAA 90 bp ACTGGGATACAAACAGCCCCAGGTCCCCAAACCATCCAAAGAGCCCTCCCTGTTCAGGTCTACTCTGGCTaGGGGAGTGATTCAGAGAAG +
Preference number: 5 (lower is better)
Translates to: TGIQTAPGPQTIQRALPVQVYSG*GSDSEK
Trigger: CTTCTCTGAATCACTCCCCAAGCCAGAGTAGACCTG...AACAGGGAGGGCTCTTTGGATGGTTTGGGGACCTGGGGCTGTTTGTATCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CAA 90 bp TCACCTCTTCCTTATTGTGATGGTTCCCAAAGGGCTGCGTACAGAGATGGAGGGCCCTCCTCAACACTATaGCCTGGGCTGGTACAAGAG +
Preference number: 5 (lower is better)
Translates to: SPLPYCDGSQRAAYRDGGPSSTL*PGLVQE
Trigger: CTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGGG...CCCTCCATCTCTGTACGCAGCCCTTTGGGAACCATCACAATAAGGAAGAGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CAA 90 bp CCCCTTGCCCATCACTCCTCAGGGTGGATGGCTCTGCCATCTCTGTCTTCCACTGCAACATGGCTTATGTaGGAATCCATGGCTGTACAA +
Preference number: 5 (lower is better)
Translates to: PLAHHSSGWMALPSLSSTATWLM*ESMAVQ
Trigger: TTGTACAGCCATGGATTCCAACATAAGCCATGTTGC...AGTGGAAGACAGAGATGGCAGAGCCATCCACCCTGAGGAGTGATGGGCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CAA 90 bp ATAGTTCTCAGATCACCTGTGGCCTTGCCATCTCTGATGGAGATAGTCTCAACCTTGGGGGAAACGGTCTaGCCCTTCCTCTGCCGTAGC +
Preference number: 5 (lower is better)
Translates to: IVLRSPVALPSLMEIVSTLGETV*PFLCRS
Trigger: GCTACGGCAGAGGAAGGGCAAGACCGTTTCCCCCAA...GGTTGAGACTATCTCCATCAGAGATGGCAAGGCCACAGGTGATCTGAGAACTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CAA 90 bp TCACCTCTTCCTTATTGTGATGGTTCCCAAAGGGCTGCGTACAGAGATGGAGGGTCCGTTTCAAGACCATaGGGGGAAACGGTCTTGCCC +
Preference number: 5 (lower is better)
Translates to: SPLPYCDGSQRAAYRDGGSVSRP*GETVLP
Trigger: GGGCAAGACCGTTTCCCCCAATGGTCTTGAAACGGA...CCCTCCATCTCTGTACGCAGCCCTTTGGGAACCATCACAATAAGGAAGAGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CAA 90 bp CCAGTGCACTTGAGGGTTCACACTCTCCCACCACATGGTAGCACCTTGCCTGGGGATTCAGAGAAGGCTTaGAATGCCCCTTACTTTCCT +
Preference number: 5 (lower is better)
Translates to: PVHLRVHTLPPHGSTLPGDSEKA*NAPYFP
Trigger: AGGAAAGTAAGGGGCATTCAAAGCCTTCTCTGAATC...CCCAGGCAAGGTGCTACCATGTGGTGGGAGAGTGTGAACCCTCAAGTGCACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS TCA 90 bp GGAGCCGAACTTTCTTCATGTTGTCAAACTCTTCAGGCTTCCAGGTaGGGCGATAATCTTCCCACTCCTGGGTCAGCCAGACATTGGTGG +
Preference number: 5 (lower is better)
Translates to: GAELSSCCQTLQASR*GDNLPTPGSARHWW
Trigger: CCACCAATGTCTGGCTGACCCAGGAGTGGGAAGATTATCGCCTCACCTGGAAGCCTGAAGAGTTTGACAACATGAAGAAAGTTCGGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS GCA 90 bp GGAAGGTGGTGGTGGTGTAGTTCTGGAAGAGAGGCTGCAGGAACATaGCGATGGTGCCAAAGACACAGACAAAGACAAAGATCCAGAGGA +
Preference number: 5 (lower is better)
Translates to: GRWWWCSSGREAAGT*RWCQRHRQRQRSRG
Trigger: TCCTCTGGATCTTTGTCTTTGTCTGTGTCTTTGGCACCATCGGCATGTTCCTGCAGCCTCTCTTCCAGAACTACACCACCACCACCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368476.4
ENST00000636034.1
ENST00000637900.1
CDS GCA 90 bp CAAGGAGGGTTCAGGCATAATACAGGCAACTCCCAATCCGCTCTGTaGTTGTCTCACCGTGTGGGTCAGTTTCTTCATCTGCAACATGGC +
Preference number: 5 (lower is better)
Translates to: QGGFRHNTGNSQSAL*LSHRVGQFLHLQHG
Trigger: GCCATGTTGCAGATGAAGAAACTGACCCACACGGTGAGACAAGCACAGAGCGGATTGGGAGTTGCCTGTATTATGCCTGAACCCTCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635876.1
CDS-3UTR CAA 90 bp GCCCAGGTAACCCTTTCATATACACTGACCCCTTTCTTCCTTGCTGAAGACCTCGGGAGCCAGATGTGTTaGGAAGGGAGCCGAACTTTC +
Preference number: 5 (lower is better)
Translates to: AQVTLSYTLTPFFLAEDLGSQMC*EGSRTF
Trigger: GAAAGTTCGGCTCCCTTCCAAACACATCTGGCTCCC...GAGGTCTTCAGCAAGGAAGAAAGGGGTCAGTGTATATGAAAGGGTTACCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CAA 90 bp AGAGCAGCCAAAACAAAGCAGTTGGTCCAGCCTCCAGGTTGGAGCTGCTGTGTGTACATGCCGTCAGCATaGTTGTACAGGACCACATCT +
Preference number: 5 (lower is better)
Translates to: RAAKTKQLVQPPGWSCCVYMPSA*LYRTTS
Trigger: AGATGTGGTCCTGTACAACAATGCTGACGGCATGTA...CACACAGCAGCTCCAACCTGGAGGCTGGACCAACTGCTTTGTTTTGGCTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CAA 90 bp GCCACCTCCAGATCTGGAGCTTCCTCCAGTCCTTGCCCAGCATTAAGCTGGGCAACAGATTTCAAGTATTaGGACCTGAGACTCCAAGCA +
Preference number: 5 (lower is better)
Translates to: ATSRSGASSSPCPALSWATDFKY*DLRLQA
Trigger: TGCTTGGAGTCTCAGGTCCAAATACTTGAAATCTGT...TGCCCAGCTTAATGCTGGGCAAGGACTGGAGGAAGCTCCAGATCTGGAGGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CAA 90 bp CGACCCAAGGGTGGAAGAGACTGTGGTTCCCCAAAGCTTCCCAGTGCACTTGAGGCAACATGGCTTATGTaGGAATCCATGGCTGTACAA +
Preference number: 5 (lower is better)
Translates to: RPKGGRDCGSPKLPSALEATWLM*ESMAVQ
Trigger: TTGTACAGCCATGGATTCCAACATAAGCCATGTTGC...CTCAAGTGCACTGGGAAGCTTTGGGGAACCACAGTCTCTTCCACCCTTGGGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CAA 90 bp CCCTCCTCAACACTATTGCCTGGGCTGGTACAAGAGATGGAGAGCAGCCAAAACTCTCACCAGCTCCAGTaGCCTGTCAGACTCAACATT +
Preference number: 5 (lower is better)
Translates to: PSSTLLPGLVQEMESSQNSHQLQ*PVRLNI
Trigger: AATGTTGAGTCTGACAGGCAACTGGAGCTGGTGAGA...GTTTTGGCTGCTCTCCATCTCTTGTACCAGCCCAGGCAATAGTGTTGAGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CAA 90 bp CACTATTGCCTGGGCTGGTACAAGAGATGGAGAGCAGCCAAAACAAAGCAGTTGTCCGTTTCAAGACCATaGGGGGAAACGGTCTTGCCC +
Preference number: 5 (lower is better)
Translates to: HYCLGWYKRWRAAKTKQLSVSRP*GETVLP
Trigger: GGGCAAGACCGTTTCCCCCAATGGTCTTGAAACGGA...CAACTGCTTTGTTTTGGCTGCTCTCCATCTCTTGTACCAGCCCAGGCAATAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS TCA 90 bp GGAGCCGAACTTTCTTCATGTTGTCAAACTCTTCAGGCTTCCAGGTaGGGCGATAATCTTCCCACTCGCTTACCTGGGTCAGCCAGACAT +
Preference number: 5 (lower is better)
Translates to: GAELSSCCQTLQASR*GDNLPTRLPGSARH
Trigger: ATGTCTGGCTGACCCAGGTAAGCGAGTGGGAAGATTATCGCCTCACCTGGAAGCCTGAAGAGTTTGACAACATGAAGAAAGTTCGGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637900.1
CDS-3UTR CAA 90 bp AGGCATAGGGGCTTCCCTGACATCAAGAGAAGAGGACGACACACGACCCAAGGGCGAACTTTCTTCATGTaGTCAAACTCTTCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: RHRGFPDIKRRGRHTTQGRTFFM*SNSSGF
Trigger: GAAGCCTGAAGAGTTTGACAACATGAAGAAAGTTCG...CCCTTGGGTCGTGTGTCGTCCTCTTCTCTTGATGTCAGGGAAGCCCCTATGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CAA 90 bp GCCCAGGTAACCCTTTCATATACACTGACCCCTTTCTTCCTTGCTGAAGACCTCATGCCGTCAGCATTGTaGTACAGGACCACATCTGGG +
Preference number: 5 (lower is better)
Translates to: AQVTLSYTLTPFFLAEDLMPSAL*YRTTSG
Trigger: CCCAGATGTGGTCCTGTACAACAATGCTGACGGCAT...GAGGTCTTCAGCAAGGAAGAAAGGGGTCAGTGTATATGAAAGGGTTACCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CAA 90 bp TTCAGGCATAATACAGGCAACTCCCAATCCGCTCATCTGCTGGCCTCTGGAAGCTACATGCCGTCAGCATaGTTGTACAGGACCACATCT +
Preference number: 5 (lower is better)
Translates to: FRHNTGNSQSAHLLASGSYMPSA*LYRTTS
Trigger: AGATGTGGTCCTGTACAACAATGCTGACGGCATGTA...GCTTCCAGAGGCCAGCAGATGAGCGGATTGGGAGTTGCCTGTATTATGCCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636034.1
CDS-3UTR CAA 90 bp GATGGAGAGCAGCCAAAACAAAGCAGTTGGTCCAGCCTCCAGGTTGGAGCTGCTCGAACTTTCTTCATGTaGTCAAACTCTTCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: DGEQPKQSSWSSLQVGAARTFFM*SNSSGF
Trigger: GAAGCCTGAAGAGTTTGACAACATGAAGAAAGTTCG...AGCAGCTCCAACCTGGAGGCTGGACCAACTGCTTTGTTTTGGCTGCTCTCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000637900.1
CDS-3UTR CAA 90 bp TTCTTCCAGTTCCAAAAGCCCATGAACTTGGACTTCTCACAGATTTCAAGTATTTGCACCGACGCGCGGTaGACGAAGCACGTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: FFQFQKPMNLDFSQISSICTDAR*TKHVQE
Trigger: CTCCTGCACGTGCTTCGTCAACCGCGCGTCGGTGCA...AATACTTGAAATCTGTGAGAAGTCCAAGTTCATGGGCTTTTGGAACTGGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CAA 90 bp CTTCTCACAGATTTCAAGTATTTGGACCTGAGACTCCAAGCAGGTCACCCAAAGGCCAAAACAAAGCAGTaGGTCCAGCCTCCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: LLTDFKYLDLRLQAGHPKAKTKQ*VQPPGW
Trigger: CCAACCTGGAGGCTGGACCAACTGCTTTGTTTTGGC...CTTTGGGTGACCTGCTTGGAGTCTCAGGTCCAAATACTTGAAATCTGTGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CAA 90 bp AAACAGCAGACAAGCTCTAGGCCTGTTTACTCGTGTGTTAACCGGGTCATGGAGGAGGCTCCTTTCCTGTaGCTGTTTCTGGTTCCAAGA +
Preference number: 5 (lower is better)
Translates to: KQQTSSRPVYSCVNRVMEEAPFL*LFLVPR
Trigger: TCTTGGAACCAGAAACAGCAACAGGAAAGGAGCCTC...CTCCATGACCCGGTTAACACACGAGTAAACAGGCCTAGAGCTTGTCTGCTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CAA 90 bp CCTCCCTGTTTCCTCTTCCGTTTCAAGACCATTGGGGGAAACGGTCTTGCCCTTGATTCAGAGAAGGCTTaGAATGCCCCTTACTTTCCT +
Preference number: 5 (lower is better)
Translates to: PPCFLFRFKTIGGNGLALDSEKA*NAPYFP
Trigger: AGGAAAGTAAGGGGCATTCAAAGCCTTCTCTGAATC...AAGGGCAAGACCGTTTCCCCCAATGGTCTTGAAACGGAAGAGGAAACAGGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS CCA 90 bp CGTCAGCATTGTTGTACAGGACCACATCTGGGAGCCAGATGTGTTTaGAAGGGAGCCGAACTTTCTTCATGTTGTCAAACTCTTCAGGCT +
Preference number: 5 (lower is better)
Translates to: RQHCCTGPHLGARCV*KGAELSSCCQTLQA
Trigger: AGCCTGAAGAGTTTGACAACATGAAGAAAGTTCGGCTCCCTTCCAAACACATCTGGCTCCCAGATGTGGTCCTGTACAACAATGCTGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368476.4
ENST00000636034.1
ENST00000637900.1
CDS-3UTR CAA 90 bp TACTCTGGCTTGGGGAGTGATTCAGAGAAGGCTTTGAATGCCCCTTACTTTCCTCTCACTAGCTGTCACTaGGTCTTTCTGAGCCGCATT +
Preference number: 5 (lower is better)
Translates to: YSGLGSDSEKALNAPYFPLTSCH*VFLSRI
Trigger: AATGCGGCTCAGAAAGACCAAGTGACAGCTAGTGAG...AGGAAAGTAAGGGGCATTCAAAGCCTTCTCTGAATCACTCCCCAAGCCAGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CAA 90 bp ATTGCCTGGGCTGGTACAAGAGATGGAGAGCAGCCAAAACAAAGCAGTTGGTCCACAGATTTCAAGTATTaGGACCTGAGACTCCAAGCA +
Preference number: 5 (lower is better)
Translates to: IAWAGTRDGEQPKQSSWSTDFKY*DLRLQA
Trigger: TGCTTGGAGTCTCAGGTCCAAATACTTGAAATCTGT...GGACCAACTGCTTTGTTTTGGCTGCTCTCCATCTCTTGTACCAGCCCAGGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368476.4
CDS-3UTR CAA 90 bp GCCCAGGTAACCCTTTCATATACACTGACCCCTTTCTTCCTTGCTGAAGACCTCCGAACTTTCTTCATGTaGTCAAACTCTTCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: AQVTLSYTLTPFFLAEDLRTFFM*SNSSGF
Trigger: GAAGCCTGAAGAGTTTGACAACATGAAGAAAGTTCG...GAGGTCTTCAGCAAGGAAGAAAGGGGTCAGTGTATATGAAAGGGTTACCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CAA 90 bp AAACAGCAGACAAGCTCTAGGCCTGTTTACTCGTGTGTTAACCGGGTCATGGAGCAAAAGCCCATGAACTaGGACTTCTCACAGATTTCA +
Preference number: 5 (lower is better)
Translates to: KQQTSSRPVYSCVNRVMEQKPMN*DFSQIS
Trigger: TGAAATCTGTGAGAAGTCCAAGTTCATGGGCTTTTG...CTCCATGACCCGGTTAACACACGAGTAAACAGGCCTAGAGCTTGTCTGCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CAA 90 bp AACAGCAGACAAGCTCTAGGCCTGTTTACTCGTGTGTTAACCGGGTCATGGAGACAAAAGCCCATGAACTaGGACTTCTCACAGATTTCA +
Preference number: 5 (lower is better)
Translates to: NSRQALGLFTRVLTGSWRQKPMN*DFSQIS
Trigger: TGAAATCTGTGAGAAGTCCAAGTTCATGGGCTTTTG...TCTCCATGACCCGGTTAACACACGAGTAAACAGGCCTAGAGCTTGTCTGCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS-3UTR CAA 90 bp TTCTTCCAGTTCCAAAAGCCCATGAACTTGGACTTCTCACAGATTTCAAGTATTAGCTTCCTCCAGTCCTaGCCCAGCATTAAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: FFQFQKPMNLDFSQISSISFLQS*PSIKLG
Trigger: GCCCAGCTTAATGCTGGGCAAGGACTGGAGGAAGCT...AATACTTGAAATCTGTGAGAAGTCCAAGTTCATGGGCTTTTGGAACTGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS GCA 72 bp CAAGGAGCAGCGCCACGGGGCCGCAGCGCCGGGCCATaGCGCGGGCATAGCTCGCTGCCTCGCCTACACCGG +
Preference number: 6 (lower is better)
Translates to: QGAAPRGRSAGP*RGHSSLPRLHR
Trigger: CCGGTGTAGGCGAGGCAGCGAGCTATGCCCGCGGCATGGCCCGGCGCTGCGGCCCCGTGGCGCTGCTCCTTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368476.4
ENST00000636034.1
ENST00000637900.1
CDS CCA 72 bp GTGCTGAAGCCGCGCCCGCCTGGAGCTGGGTCCAGGTaGTGCCGGCCGCCGCGGTGGTTCCTGGGCCTCAGG +
Preference number: 6 (lower is better)
Translates to: VLKPRPPGAGSR*CRPPRWFLGLR
Trigger: CCTGAGGCCCAGGAACCACCGCGGCGGCCGGCACCACCTGGACCCAGCTCCAGGCGGGCGCGGCTTCAGCAC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368476.4
ENST00000636034.1
ENST00000637900.1
CDS CCA 72 bp CTGGGTCCAGGTGGTGCCGGCCGCCGCGGTGGTTCCTaGGCCTCAGGGAGCCGGCTGCGAGGAGAAACCAGC +
Preference number: 6 (lower is better)
Translates to: LGPGGAGRRGGS*ASGSRLRGETS
Trigger: GCTGGTTTCTCCTCGCAGCCGGCTCCCTGAGGCCCAGGAACCACCGCGGCGGCCGGCACCACCTGGACCCAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368476.4
ENST00000636034.1
ENST00000637900.1
CDS TCA 72 bp TCTGGTCATCGTCCTCGCTCCGCATGTGGTCTGCGATaGAGCGCACGCCGTCCACCGCCTCCCGGAGGCCAC +
Preference number: 6 (lower is better)
Translates to: SGHRPRSACGLR*SARRPPPPGGH
Trigger: GTGGCCTCCGGGAGGCGGTGGACGGCGTGCGCTTCATCGCAGACCACATGCGGAGCGAGGACGATGACCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368476.4
ENST00000636034.1
ENST00000637900.1
CDS GCA 72 bp CACGCTCTGGTCATCGTCCTCGCTCCGCATGTGGTCTaGGATGAAGCGCACGCCGTCCACCGCCTCCCGGAG +
Preference number: 6 (lower is better)
Translates to: HALVIVLAPHVV*DEAHAVHRLPE
Trigger: CTCCGGGAGGCGGTGGACGGCGTGCGCTTCATCGCAGACCACATGCGGAGCGAGGACGATGACCAGAGCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368476.4
ENST00000636034.1
ENST00000637900.1
CDS CCA 72 bp TCACTCACGCTCTGGTCATCGTCCTCGCTCCGCATGTaGTCTGCGATGAAGCGCACGCCGTCCACCGCCTCC +
Preference number: 6 (lower is better)
Translates to: SLTLWSSSSLRM*SAMKRTPSTAS
Trigger: GGAGGCGGTGGACGGCGTGCGCTTCATCGCAGACCACATGCGGAGCGAGGACGATGACCAGAGCGTGAGTGA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368476.4
ENST00000636034.1
ENST00000637900.1
CDS CAA 72 bp GTGATGTCCACGTACGTAGAGTCGTCGGGGTTCTCGTaGCGCCGGCCCGGCAGCGCCACGATGTCCCACTCA +
Preference number: 6 (lower is better)
Translates to: VMSTYVESSGFS*RRPGSATMSHS
Trigger: TGAGTGGGACATCGTGGCGCTGCCGGGCCGGCGCAACGAGAACCCCGACGACTCTACGTACGTGGACATCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368476.4
ENST00000636034.1
ENST00000637900.1
CDS GCA 72 bp CCTCAGGGAGCCGGCTGCGAGGAGAAACCAGCTTCTTaGCTATCCTGGTATGAGCAGGCGGAGGCTTTTCCG +
Preference number: 6 (lower is better)
Translates to: PQGAGCEEKPAS*LSWYEQAEAFP
Trigger: CGGAAAAGCCTCCGCCTGCTCATACCAGGATAGGCAAGAAGCTGGTTTCTCCTCGCAGCCGGCTCCCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS CCA 72 bp GCCAGAAGATGCTGCCATCATAGGAGACCACGGCATTaGAATAGAAGGACACCTCGTACATGCCGTCAGCAT +
Preference number: 6 (lower is better)
Translates to: ARRCCHHRRPRH*NRRTPRTCRQH
Trigger: ATGCTGACGGCATGTACGAGGTGTCCTTCTATTCCAATGCCGTGGTCTCCTATGATGGCAGCATCTTCTGGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368476.4
ENST00000636034.1
ENST00000637900.1
CDS CCA 72 bp GTACATGCCGTCAGCATTGTTGTACAGGACCACATCTaGGAGCCAGATGTGTTTGGAAGGGAGCCGAACTTT +
Preference number: 6 (lower is better)
Translates to: VHAVSIVVQDHI*EPDVFGREPNF
Trigger: AAAGTTCGGCTCCCTTCCAAACACATCTGGCTCCCAGATGTGGTCCTGTACAACAATGCTGACGGCATGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368476.4
ENST00000636034.1
ENST00000637900.1
CDS CAA 90 bp CCGTCAGCATTGTTGTACAGGACCACATCTGGGAGCCAGATGTGTTaGGAAGGGAGCCGAACTTTCTTCATGTTGTCAAACTCTTCAGGC +
Preference number: 6 (lower is better)
Translates to: PSALLYRTTSGSQMC*EGSRTFFMLSNSSG
Trigger: GCCTGAAGAGTTTGACAACATGAAGAAAGTTCGGCTCCCTTCCAAACACATCTGGCTCCCAGATGTGGTCCTGTACAACAATGCTGACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368476.4
ENST00000636034.1
ENST00000637900.1
CDS TCA 72 bp CTTTCTTCATGTTGTCAAACTCTTCAGGCTTCCAGGTaGGGCGATAATCTTCCCACTCCTGGGTCAGCCAGA +
Preference number: 6 (lower is better)
Translates to: LSSCCQTLQASR*GDNLPTPGSAR
Trigger: TCTGGCTGACCCAGGAGTGGGAAGATTATCGCCTCACCTGGAAGCCTGAAGAGTTTGACAACATGAAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368476.4
ENST00000636034.1
CDS GCA 72 bp TGGTGGTGTAGTTCTGGAAGAGAGGCTGCAGGAACATaGCGATGGTGCCAAAGACACAGACAAAGACAAAGA +
Preference number: 6 (lower is better)
Translates to: WWCSSGREAAGT*RWCQRHRQRQR
Trigger: TCTTTGTCTTTGTCTGTGTCTTTGGCACCATCGGCATGTTCCTGCAGCCTCTCTTCCAGAACTACACCACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368476.4
ENST00000636034.1
ENST00000637900.1
CDS GCA 72 bp TTCAGGCATAATACAGGCAACTCCCAATCCGCTCTGTaGTTGTCTCACCGTGTGGGTCAGTTTCTTCATCTG +
Preference number: 6 (lower is better)
Translates to: FRHNTGNSQSAL*LSHRVGQFLHL
Trigger: CAGATGAAGAAACTGACCCACACGGTGAGACAAGCACAGAGCGGATTGGGAGTTGCCTGTATTATGCCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635876.1
CDS CCA 72 bp GCAACTCCCAATCCGCTCTGTGCTTGTCTCACCGTGTaGGTCAGTTTCTTCATCTGCAACATGGCTTATGTT +
Preference number: 6 (lower is better)
Translates to: ATPNPLCACLTV*VSFFICNMAYV
Trigger: AACATAAGCCATGTTGCAGATGAAGAAACTGACCCACACGGTGAGACAAGCACAGAGCGGATTGGGAGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635876.1
CDS TCA 72 bp CTTTCTTCATGTTGTCAAACTCTTCAGGCTTCCAGGTaGGGCGATAATCTTCCCACTCGCTTACCTGGGTCA +
Preference number: 6 (lower is better)
Translates to: LSSCCQTLQASR*GDNLPTRLPGS
Trigger: TGACCCAGGTAAGCGAGTGGGAAGATTATCGCCTCACCTGGAAGCCTGAAGAGTTTGACAACATGAAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637900.1
CDS CCA 72 bp TGTTGTACAGGACCACATCTGGGAGCCAGATGTGTTTaGAAGGGAGCCGAACTTTCTTCATGTTGTCAAACT +
Preference number: 6 (lower is better)
Translates to: CCTGPHLGARCV*KGAELSSCCQT
Trigger: AGTTTGACAACATGAAGAAAGTTCGGCTCCCTTCCAAACACATCTGGCTCCCAGATGTGGTCCTGTACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368476.4
ENST00000636034.1
ENST00000637900.1
CDS CAA 72 bp TTGTTGTACAGGACCACATCTGGGAGCCAGATGTGTTaGGAAGGGAGCCGAACTTTCTTCATGTTGTCAAAC +
Preference number: 6 (lower is better)
Translates to: LLYRTTSGSQMC*EGSRTFFMLSN
Trigger: GTTTGACAACATGAAGAAAGTTCGGCTCCCTTCCAAACACATCTGGCTCCCAGATGTGGTCCTGTACAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368476.4
ENST00000636034.1
ENST00000637900.1