Pregenerated sensors for CHRNA9 (Homo sapiens)
Ensembl gene IDs: ENSG00000174343Ensembl transcript IDs: ENST00000310169.3, ENST00000502377.1, ENST00000509518.1
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CAGCTGATGCTTAGACTTTCTTTACATGGGACAAAACCTTTTATTCCACTATTTCACCCACCACTACGGTaGGCTATAAAAGGGCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: QLMLRLSLHGTKPFIPLFHPPLR*AIKGLF Trigger: AAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTG...AAATAGTGGAATAAAAGGTTTTGTCCCATGTAAAGAAAGTCTAAGCATCAGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| 3UTR-3UTR CCA 90 bp | CAGCTGATGCTTAGACTTTCTTTACATGGGACAAAACCTTTTATTCCACTATTTATCTTGGAAGAACATTaGAATAGATCACAGGGAATT | + |
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Preference number: 2 (lower is better) Translates to: QLMLRLSLHGTKPFIPLFILEEH*NRSQGI Trigger: AATTCCCTGTGATCTATTCCAATGTTCTTCCAAGAT...AAATAGTGGAATAAAAGGTTTTGTCCCATGTAAAGAAAGTCTAAGCATCAGCTG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| 3UTR-3UTR CAA 90 bp | GAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCTCCATCTTCCTACCCTaGAAATTTTGGTTCTTCTGC | + |
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Preference number: 3 (lower is better) Translates to: EASHPPLRWAIKGLFPYFSIFLP*KFWFFC Trigger: GCAGAAGAACCAAAATTTCAAGGGTAGGAAGATGGA...GAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| 3UTR CCA 72 bp | TTATATAAACTAGAGGCCAGTCACCCACCACTACGGTaGGCTATAAAAGGGCTCTTTCCCTATTTCTTCCAT | + |
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Preference number: 3 (lower is better) Translates to: LYKLEASHPPLR*AIKGLFPYFFH Trigger: ATGGAAGAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTCTAGTTTATATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR TCA 90 bp | GAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCGGTCACTGGGGATCCTaGTGGAGTCTAGGCCATCGT | + |
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Preference number: 4 (lower is better) Translates to: EASHPPLRWAIKGLFPYFGHWGS*WSLGHR Trigger: ACGATGGCCTAGACTCCATCAGGATCCCCAGTGACC...GAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR GCA 90 bp | TATAAACTAGAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTAGGAGCCCACACCGCTaGAGCCTTATGGCGGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: YKLEASHPPLRWAIKGLFRSPHR*SLMAGE Trigger: CTCTCCCGCCATAAGGCTGCAGCGGTGTGGGCTCCT...AAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTCTAGTTTATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR TCA 90 bp | GAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCACATGTATTTCAGGATaGCCACCCTGGCCCAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: EASHPPLRWAIKGLFPYFTCISG*PPWPSV Trigger: CACACTGGGCCAGGGTGGTCATCCTGAAATACATGT...GAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR CCA 90 bp | TATAAACTAGAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTACCGCTGCAGCCTTATaGCGGGAGAGCTCAGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: YKLEASHPPLRWAIKGLFTAAAL*RESSGL Trigger: CAAGCCTGAGCTCTCCCGCCATAAGGCTGCAGCGGT...AAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTCTAGTTTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR CCA 90 bp | GAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCGAATTGGTGGCCTTGTaGTCTTTGAGGCACTTGGCG | + |
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Preference number: 4 (lower is better) Translates to: EASHPPLRWAIKGLFPYFELVAL*SLRHLA Trigger: CGCCAAGTGCCTCAAAGACCACAAGGCCACCAATTC...GAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR TCA 90 bp | TATAAACTAGAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTGATCTCGGTCCCACGTaGGATAGGCATCGTGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: YKLEASHPPLRWAIKGLFDLGPT*DRHRAR Trigger: TCTGGCACGATGCCTATCTCACGTGGGACCGAGATC...AAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTCTAGTTTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR TCA 90 bp | ACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCTTCCATCTTCCTACCCGGTGCATCCCAGGTaGTCAGCCCATCATACCGCA | + |
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Preference number: 4 (lower is better) Translates to: TTTVGYKRALSLFLPSSYPVHPR*SAHHTA Trigger: TGCGGTATGATGGGCTGATCACCTGGGATGCACCGG...GTAGGAAGATGGAAGAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR TCA 90 bp | ACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCTTCCATCTTCCTACCACAGGAGCTTTTGGTaGTGGCCGGTGCATCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: TTTVGYKRALSLFLPSSYHRSFW*WPVHPR Trigger: CCTGGGATGCACCGGCCATCACCAAAAGCTCCTGTG...GTAGGAAGATGGAAGAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR TCA 90 bp | GAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCGGATATTCATCACCATaGTGGTCAACGCAGTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: EASHPPLRWAIKGLFPYFGYSSP*WSTQWR Trigger: CCTCCACTGCGTTGACCATCATGGTGATGAATATCC...GAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR CCA 90 bp | ACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCTTCCATCTTCCTACTCCCGCTCTCTACTGTaGTGCGGGCTGAGGCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: TTTVGYKRALSLFLPSSYSRSLL*CGLRQL Trigger: AAGCTGCCTCAGCCCGCACCACAGTAGAGAGCGGGA...GTAGGAAGATGGAAGAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR TCA 90 bp | TATAAACTAGAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTTCTAGGCCATCGTACTaGTCTCGGTCCCACGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: YKLEASHPPLRWAIKGLFSRPSY*SRSHVR Trigger: TCTCACGTGGGACCGAGATCAGTACGATGGCCTAGA...AAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTCTAGTTTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR TCA 90 bp | TATAAACTAGAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTCAGGGGCACATTTTCTaGGGCCGGCATGATTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: YKLEASHPPLRWAIKGLFQGHIF*GRHDFC Trigger: GCAGAAATCATGCCGGCCTCAGAAAATGTGCCCCTG...AAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTCTAGTTTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR TCA 90 bp | ACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCTTCCATCTTCCTACTACTGTGGTGCGGGCTaGGGCAGCTTTCACCCACAT | + |
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Preference number: 4 (lower is better) Translates to: TTTVGYKRALSLFLPSSYYCGAG*GSFHPH Trigger: ATGTGGGTGAAAGCTGCCTCAGCCCGCACCACAGTA...GTAGGAAGATGGAAGAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR GCA 90 bp | GAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCTCCAGCAAAAGGAGATaGAGGAATGGGACCAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: EASHPPLRWAIKGLFPYFSSKRR*RNGTSS Trigger: TGAACTGGTCCCATTCCTGCATCTCCTTTTGCTGGA...GAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR GCA 90 bp | GAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCAGCATATTTTCCATCTaGCGTCTCTGCAGCTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: EASHPPLRWAIKGLFPYFSIFSI*RLCSSQ Trigger: CTGAGAGCTGCAGAGACGGCAGATGGAAAATATGCT...GAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR GCA 90 bp | TATAAACTAGAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTTCTTCACAGCGGGCATaGCATGGACCTCCCATTCCA | + |
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Preference number: 4 (lower is better) Translates to: YKLEASHPPLRWAIKGLFSSQRA*HGPPIP Trigger: TGGAATGGGAGGTCCATGGCATGCCCGCTGTGAAGA...AAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTCTAGTTTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR GCA 90 bp | GAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCCTTTTCTCCGGAGGCTaGTGGGAGATAAAAACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EASHPPLRWAIKGLFPYFLFSGG*WEIKTQ Trigger: CTGAGTTTTTATCTCCCAGCAGCCTCCGGAGAAAAG...GAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR GCA 90 bp | ACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCTTCCATCTTCCTACCGCTCTCTACTGTGGTaGGGGCTGAGGCAGCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: TTTVGYKRALSLFLPSSYRSLLW*GLRQLS Trigger: TGAAAGCTGCCTCAGCCCGCACCACAGTAGAGAGCG...GTAGGAAGATGGAAGAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR GCA 90 bp | GAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCGTCTTTGTTCCTGGCTaGTTTCAGGTTAGACTCTGG | + |
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Preference number: 4 (lower is better) Translates to: EASHPPLRWAIKGLFPYFVFVPG*FQVRLW Trigger: CCAGAGTCTAACCTGAAAGCAGCCAGGAACAAAGAC...GAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR CCA 90 bp | TATAAACTAGAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTACAGCGGGCATGCCATaGACCTCCCATTCCACATCT | + |
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Preference number: 4 (lower is better) Translates to: YKLEASHPPLRWAIKGLFTAGMP*TSHSTS Trigger: AGATGTGGAATGGGAGGTCCATGGCATGCCCGCTGT...AAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTCTAGTTTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR CCA 90 bp | TATAAACTAGAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTTCATGGCCAACAGGATaGTCACTCCCAGGGAGACCT | + |
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Preference number: 4 (lower is better) Translates to: YKLEASHPPLRWAIKGLFSWPTG*SLPGRP Trigger: AGGTCTCCCTGGGAGTGACCATCCTGTTGGCCATGA...AAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTCTAGTTTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR GCA 90 bp | ACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCTTCCATCTTCCTACTCCATCTGCCGTCTCTaGAGCTCTCAGTCTGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: TTTVGYKRALSLFLPSSYSICRL*SSQSGS Trigger: GCTTCCAGACTGAGAGCTGCAGAGACGGCAGATGGA...GTAGGAAGATGGAAGAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR GCA 90 bp | GAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCATATGTCCACCTGATTaGCATTGTAGGTCCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: EASHPPLRWAIKGLFPYFICPPD*HCRSRN Trigger: GTTCCTGGACCTACAATGGCAATCAGGTGGACATAT...GAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR CCA 90 bp | ACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCTTCCATCTTCCTACCTCAGTCAGGCAGCGTaGTCTTCCACTTCCCCCTAT | + |
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Preference number: 4 (lower is better) Translates to: TTTVGYKRALSLFLPSSYLSQAA*SSTSPY Trigger: ATAGGGGGAAGTGGAAGACCACGCTGCCTGACTGAG...GTAGGAAGATGGAAGAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR TCA 90 bp | ACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCTTCCATCTTCCTACCGCTGTCCAAGGCGTTaGATATGTCCACCTGATTGC | + |
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Preference number: 4 (lower is better) Translates to: TTTVGYKRALSLFLPSSYRCPRR*ICPPDC Trigger: GCAATCAGGTGGACATATTCAACGCCTTGGACAGCG...GTAGGAAGATGGAAGAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR TCA 90 bp | TATAAACTAGAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTTGCTATAAACTTTCGTaGGGTGGTCCCGCTCTCTAC | + |
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Preference number: 4 (lower is better) Translates to: YKLEASHPPLRWAIKGLFCYKLS*GGPALY Trigger: GTAGAGAGCGGGACCACCTCACGAAAGTTTATAGCA...AAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTCTAGTTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR TCA 90 bp | GAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCCCATCTTCCTACCCTTaGAATTTTGGTTCTTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: EASHPPLRWAIKGLFPYFPSSYP*NFGSSA Trigger: AGCAGAAGAACCAAAATTTCAAGGGTAGGAAGATGG...GAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR GCA 90 bp | TATAAACTAGAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTCAGCACTTTGTACTGTaGACAGTAACTCTCGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: YKLEASHPPLRWAIKGLFQHFVL*TVTLGL Trigger: GAGGCCGAGAGTTACTGTGCACAGTACAAAGTGCTG...AAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTCTAGTTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR CCA 90 bp | ACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCTTCCATCTTCCTACACCGCAGGACCACATTaGTGTTCACAGGCTCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: TTTVGYKRALSLFLPSSYTAGPH*CSQALK Trigger: CTTCAGAGCCTGTGAACACCAATGTGGTCCTGCGGT...GTAGGAAGATGGAAGAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR CCA 90 bp | TATAAACTAGAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTCACCCACCACTACGGTaGGCTATAAAAGGGCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: YKLEASHPPLRWAIKGLFHPPLR*AIKGLF Trigger: AAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTG...AAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTCTAGTTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR TCA 90 bp | TATAAACTAGAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTGGTGTTCACAGGCTCTaGAGATTCATCATCAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: YKLEASHPPLRWAIKGLFGVHRL*RFIISL Trigger: AAGGCTGATGATGAATCTTCAGAGCCTGTGAACACC...AAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTCTAGTTTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR TCA 90 bp | ACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCTTCCATCTTCCTACTTTCTGAGGCCGGCATaGTTTCTGCCACCATTAGCT | + |
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Preference number: 4 (lower is better) Translates to: TTTVGYKRALSLFLPSSYFLRPA*FLPPLA Trigger: AGCTAATGGTGGCAGAAATCATGCCGGCCTCAGAAA...GTAGGAAGATGGAAGAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR CCA 90 bp | TATAAACTAGAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTTCGGCCCCACAGAAGTaGATATTCATCACCATGATG | + |
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Preference number: 4 (lower is better) Translates to: YKLEASHPPLRWAIKGLFSAPQK*IFITMM Trigger: CATCATGGTGATGAATATCCACTTCTGTGGGGCCGA...AAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTCTAGTTTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR TCA 90 bp | ACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCTTCCATCTTCCTACTTCCACTTCCCCCTATaGATACAAAGGATCTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: TTTVGYKRALSLFLPSSYFHFPL*IQRIWA Trigger: TGCCCAGATCCTTTGTATTCATAGGGGGAAGTGGAA...GTAGGAAGATGGAAGAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR GCA 90 bp | TATAAACTAGAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTAAAGTCAGGTTGCACTaGTGGTTGTCAAAAGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: YKLEASHPPLRWAIKGLFKVRLH*WLSKGK Trigger: CTTCCCTTTTGACAACCAGCAGTGCAACCTGACTTT...AAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTCTAGTTTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR TCA 90 bp | ACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCTTCCATCTTCCTACATTCCACATCTTCAATaGAGTCAGAGAGATCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: TTTVGYKRALSLFLPSSYIPHLQ*SQRDLR Trigger: GCGGAGATCTCTCTGACTTCATTGAAGATGTGGAAT...GTAGGAAGATGGAAGAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR TCA 90 bp | CAGCTGATGCTTAGACTTTCTTTACATGGGACAAAACCTTTTATTCCACTATTTACGCAGTGGAGGCTGTaGTCAGGGCCATCGTGGCTA | + |
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Preference number: 4 (lower is better) Translates to: QLMLRLSLHGTKPFIPLFTQWRL*SGPSWL Trigger: TAGCCACGATGGCCCTGATCACAGCCTCCACTGCGT...AAATAGTGGAATAAAAGGTTTTGTCCCATGTAAAGAAAGTCTAAGCATCAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR TCA 90 bp | TATAAACTAGAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTCAAAGCCAATATCTGTaGCTAATCCGCTCTTGCTAT | + |
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Preference number: 4 (lower is better) Translates to: YKLEASHPPLRWAIKGLFQSQYL*LIRSCY Trigger: ATAGCAAGAGCGGATTAGTCACAGATATTGGCTTTG...AAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTCTAGTTTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR GCA 90 bp | TATAAACTAGAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTAACCAAAAGTCAGGTTaGACTGCTGGTTGTCAAAAG | + |
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Preference number: 4 (lower is better) Translates to: YKLEASHPPLRWAIKGLFNQKSG*TAGCQK Trigger: CTTTTGACAACCAGCAGTGCAACCTGACTTTTGGTT...AAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTCTAGTTTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR GCA 90 bp | TATAAACTAGAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTACTTCAAATGCACTATaGCTGAATAAGGTACCATTG | + |
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Preference number: 4 (lower is better) Translates to: YKLEASHPPLRWAIKGLFTSNAL*LNKVPL Trigger: CAATGGTACCTTATTCAGGCATAGTGCATTTGAAGT...AAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTCTAGTTTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR TCA 90 bp | CAGCTGATGCTTAGACTTTCTTTACATGGGACAAAACCTTTTATTCCACTATTTTGGCCTTGTGGTCTTTaGGGCACTTGGCGATGTACT | + |
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Preference number: 4 (lower is better) Translates to: QLMLRLSLHGTKPFIPLFWPCGL*GTWRCT Trigger: AGTACATCGCCAAGTGCCTCAAAGACCACAAGGCCA...AAATAGTGGAATAAAAGGTTTTGTCCCATGTAAAGAAAGTCTAAGCATCAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR CCA 90 bp | CAGCTGATGCTTAGACTTTCTTTACATGGGACAAAACCTTTTATTCCACTATTTGCTGAAATACAGTCATaGCCAACAGGATGGTCACTC | + |
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Preference number: 4 (lower is better) Translates to: QLMLRLSLHGTKPFIPLFAEIQS*PTGWSL Trigger: GAGTGACCATCCTGTTGGCCATGACTGTATTTCAGC...AAATAGTGGAATAAAAGGTTTTGTCCCATGTAAAGAAAGTCTAAGCATCAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR TCA 90 bp | CAGCTGATGCTTAGACTTTCTTTACATGGGACAAAACCTTTTATTCCACTATTTTCCATATCCTTAATCTaGGAGAGCGTAATCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLMLRLSLHGTKPFIPLFSISLI*ESVICR Trigger: CCTGCAGATTACGCTCTCTCAGATTAAGGATATGGA...AAATAGTGGAATAAAAGGTTTTGTCCCATGTAAAGAAAGTCTAAGCATCAGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR TCA 90 bp | CAGCTGATGCTTAGACTTTCTTTACATGGGACAAAACCTTTTATTCCACTATTTCCACTATTTGAGATATaGCTTCAAATGCACTATGCC | + |
|
Preference number: 4 (lower is better) Translates to: QLMLRLSLHGTKPFIPLFPLFEI*LQMHYA Trigger: GGCATAGTGCATTTGAAGTCATATCTCAAATAGTGG...AAATAGTGGAATAAAAGGTTTTGTCCCATGTAAAGAAAGTCTAAGCATCAGCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR TCA 90 bp | CAGCTGATGCTTAGACTTTCTTTACATGGGACAAAACCTTTTATTCCACTATTTTCCCCATTAAACAGCTaGTGCTTAGACTTTCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: QLMLRLSLHGTKPFIPLFSPLNS*CLDFLY Trigger: GTAAAGAAAGTCTAAGCATCAGCTGTTTAATGGGGA...AAATAGTGGAATAAAAGGTTTTGTCCCATGTAAAGAAAGTCTAAGCATCAGCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR TCA 90 bp | CAGCTGATGCTTAGACTTTCTTTACATGGGACAAAACCTTTTATTCCACTATTTACGACATCACCATTATaGAGAAAGTTCTTTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QLMLRLSLHGTKPFIPLFTTSPL*RKFFSP Trigger: TGGGGAAAAGAACTTTCTTCATAATGGTGATGTCGT...AAATAGTGGAATAAAAGGTTTTGTCCCATGTAAAGAAAGTCTAAGCATCAGCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR TCA 90 bp | CAGCTGATGCTTAGACTTTCTTTACATGGGACAAAACCTTTTATTCCACTATTTTCATTAAACAACTTCTaGGCATATTTTCCATCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QLMLRLSLHGTKPFIPLFSLNNF*AYFPSA Trigger: GGCAGATGGAAAATATGCTCAGAAGTTGTTTAATGA...AAATAGTGGAATAAAAGGTTTTGTCCCATGTAAAGAAAGTCTAAGCATCAGCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR CCA 90 bp | CAGCTGATGCTTAGACTTTCTTTACATGGGACAAAACCTTTTATTCCACTATTTATCTGTATCTTCCACTaGACGAAGAGCATTAGAATA | + |
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Preference number: 4 (lower is better) Translates to: QLMLRLSLHGTKPFIPLFICIFH*TKSIRI Trigger: TATTCTAATGCTCTTCGTCCAGTGGAAGATACAGAT...AAATAGTGGAATAAAAGGTTTTGTCCCATGTAAAGAAAGTCTAAGCATCAGCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS CCA 90 bp | ACCCTGGCCCAGTGTGGCACCGGCCGGGCCTCGGCCCCACAGAAGTaGATATTCATCACCATGATGGTCAACGCAGTGGAGGCTGTGATC | + |
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Preference number: 5 (lower is better) Translates to: TLAQCGTGRASAPQK*IFITMMVNAVEAVI Trigger: GATCACAGCCTCCACTGCGTTGACCATCATGGTGATGAATATCCACTTCTGTGGGGCCGAGGCCCGGCCGGTGCCACACTGGGCCAGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS TCA 90 bp | CACCCACATCATAGACAAACAAGACCCTGGACATGTATTTCAGGATaGCCACCCTGGCCCAGTGTGGCACCGGCCGGGCCTCGGCCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: HPHHRQTRPWTCISG*PPWPSVAPAGPRPH Trigger: GTGGGGCCGAGGCCCGGCCGGTGCCACACTGGGCCAGGGTGGTCATCCTGAAATACATGTCCAGGGTCTTGTTTGTCTATGATGTGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS CCA 90 bp | CAAGACCCTGGACATGTATTTCAGGATGACCACCCTGGCCCAGTGTaGCACCGGCCGGGCCTCGGCCCCACAGAAGTGGATATTCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: QDPGHVFQDDHPGPV*HRPGLGPTEVDIHH Trigger: GTGATGAATATCCACTTCTGTGGGGCCGAGGCCCGGCCGGTGCCACACTGGGCCAGGGTGGTCATCCTGAAATACATGTCCAGGGTCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS GCA 90 bp | GAAGTAGGTGACATCCACCACACAGGAGCTTTTGGTGATGGCCGGTaGATCCCAGGTGATCAGCCCATCATACCGCAGGACCACATTGGT | + |
|
Preference number: 5 (lower is better) Translates to: EVGDIHHTGAFGDGR*IPGDQPIIPQDHIG Trigger: ACCAATGTGGTCCTGCGGTATGATGGGCTGATCACCTGGGATGCACCGGCCATCACCAAAAGCTCCTGTGTGGTGGATGTCACCTACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR CAA 90 bp | GAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCGTGGCCTTGTGGTCTTaGAGGCACTTGGCGATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: EASHPPLRWAIKGLFPYFVALWS*RHLAMY Trigger: GTACATCGCCAAGTGCCTCAAAGACCACAAGGCCAC...GAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS TCA 90 bp | ATAATAAAGTCTCAGTCAGGCAGCGTGGTCTTCCACTTCCCCCTATaGATACAAAGGATCTGGGCACAAGGAGCCCACACCGCTGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: IIKSQSGSVVFHFPL*IQRIWAQGAHTAAA Trigger: GGCTGCAGCGGTGTGGGCTCCTTGTGCCCAGATCCTTTGTATTCATAGGGGGAAGTGGAAGACCACGCTGCCTGACTGAGACTTTATTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS TCA 90 bp | AGGGGCACATTTTCTGAGGCCGGCATGATTTCTGCCACCATTAGCTaGAATACAGTCATGGCCAACAGGATGGTCACTCCCAGGGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: RGTFSEAGMISATIS*NTVMANRMVTPRET Trigger: GGTCTCCCTGGGAGTGACCATCCTGTTGGCCATGACTGTATTTCAGCTAATGGTGGCAGAAATCATGCCGGCCTCAGAAAATGTGCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS GCA 90 bp | GCACTTGGCGATGTACTCAATATTCCTCGTCAGCACTTTGTACTGTaGACAGTAACTCTCGGCCTCCTGAGGGTTCTTACCCTGGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ALGDVLNIPRQHFVL*TVTLGLLRVLTLAA Trigger: GGCTGCCAGGGTAAGAACCCTCAGGAGGCCGAGAGTTACTGTGCACAGTACAAAGTGCTGACGAGGAATATTGAGTACATCGCCAAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR CAA 90 bp | GAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCTACCGCAGGACCACATaGGTGTTCACAGGCTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: EASHPPLRWAIKGLFPYFYRRTT*VFTGSE Trigger: TTCAGAGCCTGTGAACACCAATGTGGTCCTGCGGTA...GAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR CAA 90 bp | GAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCTCACTCCCCTTGGAATaGGTGGCCTTGTGGTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: EASHPPLRWAIKGLFPYFSLPLE*VALWSL Trigger: CAAAGACCACAAGGCCACCAATTCCAAGGGGAGTGA...GAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR CAA 90 bp | TATAAACTAGAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTACCACACAGGAGCTTTaGGTGATGGCCGGTGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: YKLEASHPPLRWAIKGLFTTQEL*VMAGAS Trigger: GGATGCACCGGCCATCACCAAAAGCTCCTGTGTGGT...AAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTCTAGTTTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR CAA 90 bp | GAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCTTGGAATTGGTGGCCTaGTGGTCTTTGAGGCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: EASHPPLRWAIKGLFPYFLELVA*WSLRHL Trigger: CAAGTGCCTCAAAGACCACAAGGCCACCAATTCCAA...GAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS CCA 90 bp | TTCGCCACCTTCTTCCATTCACTCCCCTTGGAATTGGTGGCCTTGTaGTCTTTGAGGCACTTGGCGATGTACTCAATATTCCTCGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FATFFHSLPLELVAL*SLRHLAMYSIFLVS Trigger: GCTGACGAGGAATATTGAGTACATCGCCAAGTGCCTCAAAGACCACAAGGCCACCAATTCCAAGGGGAGTGAATGGAAGAAGGTGGCGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR CAA 90 bp | TATAAACTAGAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTGGCATCGTGCCAGATTaGGCGGATCCACAAATAAGC | + |
|
Preference number: 5 (lower is better) Translates to: YKLEASHPPLRWAIKGLFGIVPD*ADPQIS Trigger: GCTTATTTGTGGATCCGCCAAATCTGGCACGATGCC...AAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTCTAGTTTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR CAA 90 bp | GAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCGAACCAAAAGTCAGGTaGCACTGCTGGTTGTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: EASHPPLRWAIKGLFPYFEPKVR*HCWLSK Trigger: TTTTGACAACCAGCAGTGCAACCTGACTTTTGGTTC...GAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR CAA 90 bp | GAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCTGGTCTTTGAGGCACTaGGCGATGTACTCAATATTC | + |
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Preference number: 5 (lower is better) Translates to: EASHPPLRWAIKGLFPYFWSLRH*AMYSIF Trigger: GAATATTGAGTACATCGCCAAGTGCCTCAAAGACCA...GAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS TCA 90 bp | CCTTCTTCCATTCACTCCCCTTGGAATTGGTGGCCTTGTGGTCTTTaGGGCACTTGGCGATGTACTCAATATTCCTCGTCAGCACTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: PSSIHSPWNWWPCGL*GTWRCTQYSSSALC Trigger: ACAAAGTGCTGACGAGGAATATTGAGTACATCGCCAAGTGCCTCAAAGACCACAAGGCCACCAATTCCAAGGGGAGTGAATGGAAGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR CAA 90 bp | ACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCTTCCATCTTCCTACTTCCATTCACTCCCCTaGGAATTGGTGGCCTTGTGG | + |
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Preference number: 5 (lower is better) Translates to: TTTVGYKRALSLFLPSSYFHSLP*ELVALW Trigger: CCACAAGGCCACCAATTCCAAGGGGAGTGAATGGAA...GTAGGAAGATGGAAGAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS TCA 90 bp | TCCAGCAAAAGGAGATGCAGGAATGGGACCAGTTCATCTTTTTCCTaGGCCTCTATAATAAAGTCTCAGTCAGGCAGCGTGGTCTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: SSKRRCRNGTSSSFS*ASIIKSQSGSVVFH Trigger: GTGGAAGACCACGCTGCCTGACTGAGACTTTATTATAGAGGCTCAGGAAAAAGATGAACTGGTCCCATTCCTGCATCTCCTTTTGCTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS CCA 90 bp | CTTTCTGGAAAGGTCTTTGTTCCTGGCTGCTTTCAGGTTAGACTCTaGGAGTTTGCTATAAACTTTCGTGAGGTGGTCCCGCTCTCTACT | + |
|
Preference number: 5 (lower is better) Translates to: LSGKVFVPGCFQVRL*EFAINFREVVPLST Trigger: AGTAGAGAGCGGGACCACCTCACGAAAGTTTATAGCAAACTCCCAGAGTCTAACCTGAAAGCAGCCAGGAACAAAGACCTTTCCAGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR CAA 90 bp | TATAAACTAGAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTTTTCTGGAAAGGTCTTaGTTCCTGGCTGCTTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: YKLEASHPPLRWAIKGLFFLERS*FLAAFR Trigger: CCTGAAAGCAGCCAGGAACAAAGACCTTTCCAGAAA...AAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTCTAGTTTATA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR CAA 90 bp | GAGGCCAGTCACCCACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCTCGTTCTTTAAGCGTTaGTTCATGTCCTTCTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: EASHPPLRWAIKGLFPYFSFFKR*FMSFFL Trigger: CAGAAAGAAGGACATGAACAAACGCTTAAAGAACGA...GAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS TCA 90 bp | ATGTGGTATTCTGGATTGGATCCCGTTATACAATGCCCCTTGCTCTaGGACCGGGAAAACGTCACTTTGTATCCCGTAAACTGGTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: MWYSGLDPVIQCPLL*DRENVTLYPVNWFI Trigger: GATGAACCAGTTTACGGGATACAAAGTGACGTTTTCCCGGTCTCAGAGCAAGGGGCATTGTATAACGGGATCCAATCCAGAATACCACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000502377.1 |
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| CDS TCA 90 bp | CTATGTAGTATTTACCTATCAGGGGCACATTTTCTGAGGCCGGCATaGTTTCTGCCACCATTAGCTGAAATACAGTCATGGCCAACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LCSIYLSGAHFLRPA*FLPPLAEIQSWPTG Trigger: TCCTGTTGGCCATGACTGTATTTCAGCTAATGGTGGCAGAAATCATGCCGGCCTCAGAAAATGTGCCCCTGATAGGTAAATACTACATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS GCA 90 bp | GCGTTTGTTCATGTCCTTCTTTCTGGAAAGGTCTTTGTTCCTGGCTaGTTTCAGGTTAGACTCTGGGAGTTTGCTATAAACTTTCGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: AFVHVLLSGKVFVPG*FQVRLWEFAINFRE Trigger: CTCACGAAAGTTTATAGCAAACTCCCAGAGTCTAACCTGAAAGCAGCCAGGAACAAAGACCTTTCCAGAAAGAAGGACATGAACAAACGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR CAA 90 bp | ACCACTACGGTGGGCTATAAAAGGGCTCTTTCCCTATTTCTTCCATCTTCCTACTCCATCTTCCTACCCTaGAAATTTTGGTTCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TTTVGYKRALSLFLPSSYSIFLP*KFWFFC Trigger: GCAGAAGAACCAAAATTTCAAGGGTAGGAAGATGGA...GTAGGAAGATGGAAGAAATAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS CCA 90 bp | CGTAATCTGCAGGGTCACATTCAGGACTTTATCTGTATCTTCCACTaGACGAAGAGCATTAGAATAATCTTCAAAAAGGTCATTAAACAA | + |
|
Preference number: 5 (lower is better) Translates to: RNLQGHIQDFICIFH*TKSIRIIFKKVIKQ Trigger: TTGTTTAATGACCTTTTTGAAGATTATTCTAATGCTCTTCGTCCAGTGGAAGATACAGATAAAGTCCTGAATGTGACCCTGCAGATTACG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS-3UTR CAA 90 bp | CAGCTGATGCTTAGACTTTCTTTACATGGGACAAAACCTTTTATTCCACTATTTGATTCATCATCAGCCTaGTTATATAAGACGATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QLMLRLSLHGTKPFIPLFDSSSA*LYKTMS Trigger: AGACATCGTCTTATATAACAAGGCTGATGATGAATC...AAATAGTGGAATAAAAGGTTTTGTCCCATGTAAAGAAAGTCTAAGCATCAGCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS CCA 72 bp | GGACATGTATTTCAGGATGACCACCCTGGCCCAGTGTaGCACCGGCCGGGCCTCGGCCCCACAGAAGTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: GHVFQDDHPGPV*HRPGLGPTEVD Trigger: ATCCACTTCTGTGGGGCCGAGGCCCGGCCGGTGCCACACTGGGCCAGGGTGGTCATCCTGAAATACATGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS CCA 72 bp | CAGTGTGGCACCGGCCGGGCCTCGGCCCCACAGAAGTaGATATTCATCACCATGATGGTCAACGCAGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: QCGTGRASAPQK*IFITMMVNAVE Trigger: CTCCACTGCGTTGACCATCATGGTGATGAATATCCACTTCTGTGGGGCCGAGGCCCGGCCGGTGCCACACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310169.3 ENST00000509518.1 |
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| CDS TCA 72 bp | TCTCAGTCAGGCAGCGTGGTCTTCCACTTCCCCCTATaGATACAAAGGATCTGGGCACAAGGAGCCCACACC | + |
|
Preference number: 6 (lower is better) Translates to: SQSGSVVFHFPL*IQRIWAQGAHT Trigger: GGTGTGGGCTCCTTGTGCCCAGATCCTTTGTATTCATAGGGGGAAGTGGAAGACCACGCTGCCTGACTGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS TCA 72 bp | TGGAGTCTAGGCCATCGTACTGATCTCGGTCCCACGTaGGATAGGCATCGTGCCAGATTTGGCGGATCCACA | + |
|
Preference number: 6 (lower is better) Translates to: WSLGHRTDLGPT*DRHRARFGGST Trigger: TGTGGATCCGCCAAATCTGGCACGATGCCTATCTCACGTGGGACCGAGATCAGTACGATGGCCTAGACTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS CCA 72 bp | CCACCATTAGCTGAAATACAGTCATGGCCAACAGGATaGTCACTCCCAGGGAGACCTTTTCTCCGGAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PPLAEIQSWPTG*SLPGRPFLRRL Trigger: CAGCCTCCGGAGAAAAGGTCTCCCTGGGAGTGACCATCCTGTTGGCCATGACTGTATTTCAGCTAATGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS CAA 72 bp | TCCCAGGTGATCAGCCCATCATACCGCAGGACCACATaGGTGTTCACAGGCTCTGAAGATTCATCATCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SQVISPSYRRTT*VFTGSEDSSSA Trigger: GGCTGATGATGAATCTTCAGAGCCTGTGAACACCAATGTGGTCCTGCGGTATGATGGGCTGATCACCTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS CAA 72 bp | ACTTTCGCCACCTTCTTCCATTCACTCCCCTTGGAATaGGTGGCCTTGTGGTCTTTGAGGCACTTGGCGATG | + |
|
Preference number: 6 (lower is better) Translates to: TFATFFHSLPLE*VALWSLRHLAM Trigger: CATCGCCAAGTGCCTCAAAGACCACAAGGCCACCAATTCCAAGGGGAGTGAATGGAAGAAGGTGGCGAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS CAA 90 bp | ACTTTCGCCACCTTCTTCCATTCACTCCCCTTGGAATTGGTGGCCTaGTGGTCTTTGAGGCACTTGGCGATGTACTCAATATTCCTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: TFATFFHSLPLELVA*WSLRHLAMYSIFLV Trigger: GACGAGGAATATTGAGTACATCGCCAAGTGCCTCAAAGACCACAAGGCCACCAATTCCAAGGGGAGTGAATGGAAGAAGGTGGCGAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS CAA 90 bp | CGGTCTATGACTTTCGCCACCTTCTTCCATTCACTCCCCTTGGAATaGGTGGCCTTGTGGTCTTTGAGGCACTTGGCGATGTACTCAATA | + |
|
Preference number: 6 (lower is better) Translates to: RSMTFATFFHSLPLE*VALWSLRHLAMYSI Trigger: TATTGAGTACATCGCCAAGTGCCTCAAAGACCACAAGGCCACCAATTCCAAGGGGAGTGAATGGAAGAAGGTGGCGAAAGTCATAGACCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS CAA 90 bp | AAGAATCGGTCTATGACTTTCGCCACCTTCTTCCATTCACTCCCCTaGGAATTGGTGGCCTTGTGGTCTTTGAGGCACTTGGCGATGTAC | + |
|
Preference number: 6 (lower is better) Translates to: KNRSMTFATFFHSLP*ELVALWSLRHLAMY Trigger: GTACATCGCCAAGTGCCTCAAAGACCACAAGGCCACCAATTCCAAGGGGAGTGAATGGAAGAAGGTGGCGAAAGTCATAGACCGATTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS TCA 72 bp | TTTTCTGAGGCCGGCATGATTTCTGCCACCATTAGCTaGAATACAGTCATGGCCAACAGGATGGTCACTCCC | + |
|
Preference number: 6 (lower is better) Translates to: FSEAGMISATIS*NTVMANRMVTP Trigger: GGGAGTGACCATCCTGTTGGCCATGACTGTATTTCAGCTAATGGTGGCAGAAATCATGCCGGCCTCAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS GCA 72 bp | GGTATTCTGGATTGGATCCCGTTATACAATGCCCCTTaGTCTGAGACCGGGAAAACGTCACTTTGTATCCCG | + |
|
Preference number: 6 (lower is better) Translates to: GILDWIPLYNAP*SETGKTSLCIP Trigger: CGGGATACAAAGTGACGTTTTCCCGGTCTCAGAGCAAGGGGCATTGTATAACGGGATCCAATCCAGAATACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000502377.1 |
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| CDS CAA 72 bp | TCTATGACTTTCGCCACCTTCTTCCATTCACTCCCCTaGGAATTGGTGGCCTTGTGGTCTTTGAGGCACTTG | + |
|
Preference number: 6 (lower is better) Translates to: SMTFATFFHSLP*ELVALWSLRHL Trigger: CAAGTGCCTCAAAGACCACAAGGCCACCAATTCCAAGGGGAGTGAATGGAAGAAGGTGGCGAAAGTCATAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS CAA 72 bp | CAGACAGTCCCTCCTGCCTTGAACACTAGAGCAGCCTaGGTTCTGTCCTTTCCAAGAGCTGGTTGTTTACTT | + |
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Preference number: 6 (lower is better) Translates to: QTVPPALNTRAA*VLSFPRAGCLL Trigger: AAGTAAACAACCAGCTCTTGGAAAGGACAGAACCAAGGCTGCTCTAGTGTTCAAGGCAGGAGGGACTGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502377.1 |
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| CDS CAA 90 bp | CATTCACTCCCCTTGGAATTGGTGGCCTTGTGGTCTTTGAGGCACTaGGCGATGTACTCAATATTCCTCGTCAGCACTTTGTACTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: HSLPLELVALWSLRH*AMYSIFLVSTLYCA Trigger: TGCACAGTACAAAGTGCTGACGAGGAATATTGAGTACATCGCCAAGTGCCTCAAAGACCACAAGGCCACCAATTCCAAGGGGAGTGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS CAA 90 bp | ACCTTCTTCCATTCACTCCCCTTGGAATTGGTGGCCTTGTGGTCTTaGAGGCACTTGGCGATGTACTCAATATTCCTCGTCAGCACTTTG | + |
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Preference number: 6 (lower is better) Translates to: TFFHSLPLELVALWS*RHLAMYSIFLVSTL Trigger: CAAAGTGCTGACGAGGAATATTGAGTACATCGCCAAGTGCCTCAAAGACCACAAGGCCACCAATTCCAAGGGGAGTGAATGGAAGAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS TCA 72 bp | TCTGGATTGGATCCCGTTATACAATGCCCCTTGCTCTaGGACCGGGAAAACGTCACTTTGTATCCCGTAAAC | + |
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Preference number: 6 (lower is better) Translates to: SGLDPVIQCPLL*DRENVTLYPVN Trigger: GTTTACGGGATACAAAGTGACGTTTTCCCGGTCTCAGAGCAAGGGGCATTGTATAACGGGATCCAATCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000502377.1 |
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| CDS GCA 72 bp | GATGTACTCAATATTCCTCGTCAGCACTTTGTACTGTaGACAGTAACTCTCGGCCTCCTGAGGGTTCTTACC | + |
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Preference number: 6 (lower is better) Translates to: DVLNIPRQHFVL*TVTLGLLRVLT Trigger: GGTAAGAACCCTCAGGAGGCCGAGAGTTACTGTGCACAGTACAAAGTGCTGACGAGGAATATTGAGTACATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS CCA 72 bp | AAGGTCTTTGTTCCTGGCTGCTTTCAGGTTAGACTCTaGGAGTTTGCTATAAACTTTCGTGAGGTGGTCCCG | + |
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Preference number: 6 (lower is better) Translates to: KVFVPGCFQVRL*EFAINFREVVP Trigger: CGGGACCACCTCACGAAAGTTTATAGCAAACTCCCAGAGTCTAACCTGAAAGCAGCCAGGAACAAAGACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS CAA 90 bp | AAGTTCCCAGGGGATGCCGATGCTGTGCATCTGGGGACCACCACTTaGAGAACTACTGCTCTAAAGTATAATGTCTTTCATTGCTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: KFPGDADAVHLGTTT*RTTALKYNVFHCSF Trigger: GAAAGAGCAATGAAAGACATTATACTTTAGAGCAGTAGTTCTCAAAGTGGTGGTCCCCAGATGCACAGCATCGGCATCCCCTGGGAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509518.1 |
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| CDS TCA 72 bp | AGGAGATGCAGGAATGGGACCAGTTCATCTTTTTCCTaGGCCTCTATAATAAAGTCTCAGTCAGGCAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: RRCRNGTSSSFS*ASIIKSQSGSV Trigger: CACGCTGCCTGACTGAGACTTTATTATAGAGGCTCAGGAAAAAGATGAACTGGTCCCATTCCTGCATCTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS CAA 72 bp | GGGGATGCCGATGCTGTGCATCTGGGGACCACCACTTaGAGAACTACTGCTCTAAAGTATAATGTCTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: GDADAVHLGTTT*RTTALKYNVFH Trigger: ATGAAAGACATTATACTTTAGAGCAGTAGTTCTCAAAGTGGTGGTCCCCAGATGCACAGCATCGGCATCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509518.1 |
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| CDS TCA 72 bp | ATTTACCTATCAGGGGCACATTTTCTGAGGCCGGCATaGTTTCTGCCACCATTAGCTGAAATACAGTCATGG | + |
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Preference number: 6 (lower is better) Translates to: IYLSGAHFLRPA*FLPPLAEIQSW Trigger: CCATGACTGTATTTCAGCTAATGGTGGCAGAAATCATGCCGGCCTCAGAAAATGTGCCCCTGATAGGTAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS CAA 72 bp | AAGCGTTTGTTCATGTCCTTCTTTCTGGAAAGGTCTTaGTTCCTGGCTGCTTTCAGGTTAGACTCTGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: KRLFMSFFLERS*FLAAFRLDSGS Trigger: ACTCCCAGAGTCTAACCTGAAAGCAGCCAGGAACAAAGACCTTTCCAGAAAGAAGGACATGAACAAACGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS CAA 72 bp | TTCTTACCCTGGCAGCCCAGGTCGTTCTTTAAGCGTTaGTTCATGTCCTTCTTTCTGGAAAGGTCTTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: FLPWQPRSFFKR*FMSFFLERSLF Trigger: GAACAAAGACCTTTCCAGAAAGAAGGACATGAACAAACGCTTAAAGAACGACCTGGGCTGCCAGGGTAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS GCA 72 bp | CATGTCCTTCTTTCTGGAAAGGTCTTTGTTCCTGGCTaGTTTCAGGTTAGACTCTGGGAGTTTGCTATAAAC | + |
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Preference number: 6 (lower is better) Translates to: HVLLSGKVFVPG*FQVRLWEFAIN Trigger: GTTTATAGCAAACTCCCAGAGTCTAACCTGAAAGCAGCCAGGAACAAAGACCTTTCCAGAAAGAAGGACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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| CDS CAA 72 bp | GTGAGCAGTGAAGTCAGCGTTCAAATGCAAGTTTCTTaGACTTCAAAATCAGGTCTTAACCTCTGGGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: VSSEVSVQMQVS*TSKSGLNLWVS Trigger: ACTGACCCAGAGGTTAAGACCTGATTTTGAAGTCAAAGAAACTTGCATTTGAACGCTGACTTCACTGCTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509518.1 |
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| CDS TCA 72 bp | CGTGGCTATGTAGTATTTACCTGTTTGATCAAGGAGTaGGCAGTGAAGTCAGCGTTCAAATGCAAGTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: RGYVVFTCLIKE*AVKSAFKCKFL Trigger: AAGAAACTTGCATTTGAACGCTGACTTCACTGCTCACTCCTTGATCAAACAGGTAAATACTACATAGCCACG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509518.1 |
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| CDS CCA 72 bp | CAGGGTCACATTCAGGACTTTATCTGTATCTTCCACTaGACGAAGAGCATTAGAATAATCTTCAAAAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: QGHIQDFICIFH*TKSIRIIFKKV Trigger: GACCTTTTTGAAGATTATTCTAATGCTCTTCGTCCAGTGGAAGATACAGATAAAGTCCTGAATGTGACCCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000310169.3 |
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