RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHRNA4 (Homo sapiens)

Ensembl gene IDs: ENSG00000101204

Ensembl transcript IDs: ENST00000370263.9, ENST00000463705.5, ENST00000467563.3, ENST00000475033.5, ENST00000480012.1, ENST00000498043.6, ENST00000626188.1, ENST00000627000.1, ENST00000627869.1, ENST00000628606.1, ENST00000628665.1, ENST00000630240.1, ENST00000636481.1, ENST00000636652.1, ENST00000637443.1, ENST00000675470.1

Found 617 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACGCTGAGGGACCTGGCTTTGGCCAGCCCTGGTGCCTGGGTGCCGTaGGGCGGGCGGCAGGGTCCAGGCGAGGGGTGGGGGCTGGCTTTC +
Preference number: 1 (lower is better)
Translates to: TLRDLALASPGAWVP*GGRQGPGEGWGLAF
Trigger: GAAAGCCAGCCCCCACCCCTCGCCTGGACCCTGCCGCCCGCCCCACGGCACCCAGGCACCAGGGCTGGCCAAAGCCAGGTCCCTCAGCGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR GCA 90 bp GGACATGTGCTGGACGCTGAGGGACCTGGCTTTGGCCAGCCCTGGTaGCTGGGTGCCGTGGGGCGGGCGGCAGGGTCCAGGCGAGGGGTG +
Preference number: 1 (lower is better)
Translates to: GHVLDAEGPGFGQPW*LGAVGRAAGSRRGV
Trigger: CACCCCTCGCCTGGACCCTGCCGCCCGCCCCACGGCACCCAGGCACCAGGGCTGGCCAAAGCCAGGTCCCTCAGCGTCCAGCACATGTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR GCA 90 bp CGGCACCGGACGCCGCCTTCCACCGCTTCGCCAGGGCTGGACATGTaGTGGACGCTGAGGGACCTGGCTTTGGCCAGCCCTGGTGCCTGG +
Preference number: 1 (lower is better)
Translates to: RHRTPPSTASPGLDM*WTLRDLALASPGAW
Trigger: CCAGGCACCAGGGCTGGCCAAAGCCAGGTCCCTCAGCGTCCAGCACATGTCCAGCCCTGGCGAAGCGGTGGAAGGCGGCGTCCGGTGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR CCA 90 bp CCTGGCCCTACGCCTGGAAGGCAGAGTCCTGGTCTCCAGACTCGCTaGGGCTGGGTGTTCCTGTCCCCCGCGGAGGGCCTGCGCAGGGGA +
Preference number: 1 (lower is better)
Translates to: PGPTPGRQSPGLQTR*GWVFLSPAEGLRRG
Trigger: TCCCCTGCGCAGGCCCTCCGCGGGGGACAGGAACACCCAGCCCCAGCGAGTCTGGAGACCAGGACTCTGCCTTCCAGGCGTAGGGCCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR CCA 90 bp CACCGGACGCCGCCTTCCACCGCTTCGCCAGGGCTGGACATGTGCTaGACGCTGAGGGACCTGGCTTTGGCCAGCCCTGGTGCCTGGGTG +
Preference number: 1 (lower is better)
Translates to: HRTPPSTASPGLDMC*TLRDLALASPGAWV
Trigger: CACCCAGGCACCAGGGCTGGCCAAAGCCAGGTCCCTCAGCGTCCAGCACATGTCCAGCCCTGGCGAAGCGGTGGAAGGCGGCGTCCGGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR CCA 90 bp AGCTCAGCCGAGTGGGTGTTGCGAGAGGCCAGGGCGCCGGCAGCCTaGCCATCTGCCTCGGGGGCGGCATCGTCTCGGGGAACACAGTAC +
Preference number: 1 (lower is better)
Translates to: SSAEWVLREARAPAA*PSASGAASSRGTQY
Trigger: GTACTGTGTTCCCCGAGACGATGCCGCCCCCGAGGCAGATGGCCAGGCTGCCGGCGCCCTGGCCTCTCGCAACACCCACTCGGCTGAGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR CCA 90 bp CATTTGCACGGAGAGGGCTGGTCTGGGGGTGGGAGCTCAGCCGAGTaGGTGTTGCGAGAGGCCAGGGCGCCGGCAGCCTGGCCATCTGCC +
Preference number: 1 (lower is better)
Translates to: HLHGEGWSGGGSSAE*VLREARAPAAWPSA
Trigger: GGCAGATGGCCAGGCTGCCGGCGCCCTGGCCTCTCGCAACACCCACTCGGCTGAGCTCCCACCCCCAGACCAGCCCTCTCCGTGCAAATG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR GCA 90 bp CATCTGCCTCGGGGGCGGCATCGTCTCGGGGAACACAGTACTGGATaGTCCGAGACCGGCACCGGACGCCGCCTTCCACCGCTTCGCCAG +
Preference number: 1 (lower is better)
Translates to: HLPRGRHRLGEHSTG*SETGTGRRLPPLRQ
Trigger: CTGGCGAAGCGGTGGAAGGCGGCGTCCGGTGCCGGTCTCGGAGCATCCAGTACTGTGTTCCCCGAGACGATGCCGCCCCCGAGGCAGATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR GCA 90 bp CGAGTGGGTGTTGCGAGAGGCCAGGGCGCCGGCAGCCTGGCCATCTaGCTCGGGGGCGGCATCGTCTCGGGGAACACAGTACTGGATGCT +
Preference number: 1 (lower is better)
Translates to: RVGVARGQGAGSLAI*LGGGIVSGNTVLDA
Trigger: AGCATCCAGTACTGTGTTCCCCGAGACGATGCCGCCCCCGAGGCAGATGGCCAGGCTGCCGGCGCCCTGGCCTCTCGCAACACCCACTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR CCA 90 bp GCGGATCTCCCGGGCTGCGCGCCAAGGTGGAAACCCTCAGGGTCCTaGGGGAACCAGGGCCCAGGTCTGGACTCCATTCGGGACCTTCCC +
Preference number: 1 (lower is better)
Translates to: ADLPGCAPRWKPSGS*GNQGPGLDSIRDLP
Trigger: GGGAAGGTCCCGAATGGAGTCCAGACCTGGGCCCTGGTTCCCCCAGGACCCTGAGGGTTTCCACCTTGGCGCGCAGCCCGGGAGATCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR CCA 90 bp TGGCCATCTGCCTCGGGGGCGGCATCGTCTCGGGGAACACAGTACTaGATGCTCCGAGACCGGCACCGGACGCCGCCTTCCACCGCTTCG +
Preference number: 1 (lower is better)
Translates to: WPSASGAASSRGTQY*MLRDRHRTPPSTAS
Trigger: CGAAGCGGTGGAAGGCGGCGTCCGGTGCCGGTCTCGGAGCATCCAGTACTGTGTTCCCCGAGACGATGCCGCCCCCGAGGCAGATGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR GCA 90 bp AAGTCCTTCTTCCCGAACCCAGAGCCCAGGGCGGATCTCCCGGGCTaGGCGCCAAGGTGGAAACCCTCAGGGTCCTGGGGGAACCAGGGC +
Preference number: 1 (lower is better)
Translates to: KSFFPNPEPRADLPG*APRWKPSGSWGNQG
Trigger: GCCCTGGTTCCCCCAGGACCCTGAGGGTTTCCACCTTGGCGCGCAGCCCGGGAGATCCGCCCTGGGCTCTGGGTTCGGGAAGAAGGACTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR GCA 90 bp CAGCTTCCATGGCCCCGGGATGACCTCACTCTCCCAGGGTCTCCCTaGGTCCTGGGAGCTCTGGCCGAGGAGCAGCAGGGGCTGATGGCA +
Preference number: 1 (lower is better)
Translates to: QLPWPRDDLTLPGSP*VLGALAEEQQGLMA
Trigger: TGCCATCAGCCCCTGCTGCTCCTCGGCCAGAGCTCCCAGGACGCAGGGAGACCCTGGGAGAGTGAGGTCATCCCGGGGCCATGGAAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR GCA 90 bp TGTGCACACACTGGGAGCACATTCCAGGGCTTGGCAGACATTGCCTaGAGAAGCCGGGCGGCCGCACCTGGGCTCGGCGGGCCACACGGT +
Preference number: 1 (lower is better)
Translates to: CAHTGSTFQGLADIA*RSRAAAPGLGGPHG
Trigger: ACCGTGTGGCCCGCCGAGCCCAGGTGCGGCCGCCCGGCTTCTGCAGGCAATGTCTGCCAAGCCCTGGAATGTGCTCCCAGTGTGTGCACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR GCA 90 bp AGTCTGTGCACACACTGGGAGCACATTCCAGGGCTTGGCAGACATTaGCTGCAGAAGCCGGGCGGCCGCACCTGGGCTCGGCGGGCCACA +
Preference number: 1 (lower is better)
Translates to: SLCTHWEHIPGLGRH*LQKPGGRTWARRAT
Trigger: TGTGGCCCGCCGAGCCCAGGTGCGGCCGCCCGGCTTCTGCAGGCAATGTCTGCCAAGCCCTGGAATGTGCTCCCAGTGTGTGCACAGACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR CCA 90 bp ACCGAGAAGTCTGTGTCTTCGGCCTTCAGGTGGTCTGCAATGTACTaGACGCCCTCCACCGCCCGGGTCAGGGCCGGCGACAGGGGCAGG +
Preference number: 1 (lower is better)
Translates to: TEKSVSSAFRWSAMY*TPSTARVRAGDRGR
Trigger: CCTGCCCCTGTCGCCGGCCCTGACCCGGGCGGTGGAGGGCGTCCAGTACATTGCAGACCACCTGAAGGCCGAAGACACAGACTTCTCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR TCA 90 bp TTTCTCAGCTTCCAGGGGCTGCTGAGGAGGGAGCTGGTCGGAGGGTaGCTTGCAGGAAGGCCCAGGCTCAGCCGGCACATCCAGGGGGAC +
Preference number: 1 (lower is better)
Translates to: FLSFQGLLRRELVGG*LAGRPRLSRHIQGD
Trigger: GTCCCCCTGGATGTGCCGGCTGAGCCTGGGCCTTCCTGCAAGTCACCCTCCGACCAGCTCCCTCCTCAGCAGCCCCTGGAAGCTGAGAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR GCA 90 bp TGGCGCTCGGGGACACCGAAGAGGGCTCCTTCTTGCATGTGCATTTaGACGGAGAGGGCTGGTCTGGGGGTGGGAGCTCAGCCGAGTGGG +
Preference number: 1 (lower is better)
Translates to: WRSGTPKRAPSCMCI*TERAGLGVGAQPSG
Trigger: CCCACTCGGCTGAGCTCCCACCCCCAGACCAGCCCTCTCCGTGCAAATGCACATGCAAGAAGGAGCCCTCTTCGGTGTCCCCGAGCGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR CCA 90 bp CCCACCTCTGCTCCAAGCCACTGCCTCCTGAGGCCACAGTCCAACTaGAAGCAGCTCCACACTCGGTCTCCCCAGAGGCCGTGTCCCCGT +
Preference number: 1 (lower is better)
Translates to: PTSAPSHCLLRPQSN*KQLHTRSPQRPCPR
Trigger: ACGGGGACACGGCCTCTGGGGAGACCGAGTGTGGAGCTGCTTCCAGTTGGACTGTGGCCTCAGGAGGCAGTGGCTTGGAGCAGAGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR GCA 90 bp GTCCTCCTTCACCGAGAAGTCTGTGTCTTCGGCCTTCAGGTGGTCTaGAATGTACTGGACGCCCTCCACCGCCCGGGTCAGGGCCGGCGA +
Preference number: 1 (lower is better)
Translates to: VLLHREVCVFGLQVV*NVLDALHRPGQGRR
Trigger: TCGCCGGCCCTGACCCGGGCGGTGGAGGGCGTCCAGTACATTGCAGACCACCTGAAGGCCGAAGACACAGACTTCTCGGTGAAGGAGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR CCA 90 bp CCCTCTCCTAGCGAAGCAGATTGGAGCGCTGCTGGCTCACCCTCATaGGGCCCGAGAGGCTCAAGGACCCTGGGGGAGAAGTTGAAGCCC +
Preference number: 1 (lower is better)
Translates to: PSPSEADWSAAGSPS*GPRGSRTLGEKLKP
Trigger: GGGCTTCAACTTCTCCCCCAGGGTCCTTGAGCCTCTCGGGCCCCATGAGGGTGAGCCAGCAGCGCTCCAATCTGCTTCGCTAGGAGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR GCA 90 bp GACTTAGCCCGAGTCCTGCAGGTAGAAGGCGCCGACCCCCACCTCTaGTCCAAGCCACTGCCTCCTGAGGCCACAGTCCAACTGGAAGCA +
Preference number: 1 (lower is better)
Translates to: DLARVLQVEGADPHL*SKPLPPEATVQLEA
Trigger: TGCTTCCAGTTGGACTGTGGCCTCAGGAGGCAGTGGCTTGGAGCAGAGGTGGGGGTCGGCGCCTTCTACCTGCAGGACTCGGGCTAAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR GCA 90 bp TCCCCTTCTGGCTCGGGCCAGAAGCGCGGGGCACTGGCCATCTTATaGATGGACTCGATGAGCCGCCGGCAATTGTCCTTGACCACGGAC +
Preference number: 1 (lower is better)
Translates to: SPSGSGQKRGALAIL*MDSMSRRQLSLTTD
Trigger: GTCCGTGGTCAAGGACAATTGCCGGCGGCTCATCGAGTCCATGCATAAGATGGCCAGTGCCCCGCGCTTCTGGCCCGAGCCAGAAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR CCA 90 bp CGTCTCTATCCCTCCTCTGAGACCAGTGTCTCCTGCCAGCTTCCATaGCCCCGGGATGACCTCACTCTCCCAGGGTCTCCCTGCGTCCTG +
Preference number: 1 (lower is better)
Translates to: RLYPSSETSVSCQLP*PRDDLTLPGSPCVL
Trigger: CAGGACGCAGGGAGACCCTGGGAGAGTGAGGTCATCCCGGGGCCATGGAAGCTGGCAGGAGACACTGGTCTCAGAGGAGGGATAGAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR CCA 90 bp CAAGGTGGAAACCCTCAGGGTCCTGGGGGAACCAGGGCCCAGGTCTaGACTCCATTCGGGACCTTCCCAGCTCCGGGGAATCACAACACA +
Preference number: 1 (lower is better)
Translates to: QGGNPQGPGGTRAQV*TPFGTFPAPGNHNT
Trigger: TGTGTTGTGATTCCCCGGAGCTGGGAAGGTCCCGAATGGAGTCCAGACCTGGGCCCTGGTTCCCCCAGGACCCTGAGGGTTTCCACCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR CCA 90 bp GCAATTGTCCTTGACCACGGACGGCCGCTTCATGAGGAGCAGGCGTaGCACGATGTCCAGGAAGACCCTGCGTACCCAGGTGGGCATGGT +
Preference number: 1 (lower is better)
Translates to: AIVLDHGRPLHEEQA*HDVQEDPAYPGGHG
Trigger: ACCATGCCCACCTGGGTACGCAGGGTCTTCCTGGACATCGTGCCACGCCTGCTCCTCATGAAGCGGCCGTCCGTGGTCAAGGACAATTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR CCA 90 bp TTCCAGTCCTCCTTCACCGAGAAGTCTGTGTCTTCGGCCTTCAGGTaGTCTGCAATGTACTGGACGCCCTCCACCGCCCGGGTCAGGGCC +
Preference number: 1 (lower is better)
Translates to: FQSSFTEKSVSSAFR*SAMYWTPSTARVRA
Trigger: GGCCCTGACCCGGGCGGTGGAGGGCGTCCAGTACATTGCAGACCACCTGAAGGCCGAAGACACAGACTTCTCGGTGAAGGAGGACTGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR TCA 90 bp CAGAATGTGGACCACTCAGCAGGAGGCTTCCTGACTGTCTCCTCCTaGACCGATGTCACTCACAGGCAGGGGACACGCCATCCTGGCCCC +
Preference number: 1 (lower is better)
Translates to: QNVDHSAGGFLTVSS*TDVTHRQGTRHPGP
Trigger: GGGGCCAGGATGGCGTGTCCCCTGCCTGTGAGTGACATCGGTTCAGGAGGAGACAGTCAGGAAGCCTCCTGCTGAGTGGTCCACATTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR CCA 90 bp AACCAAACACAATCCCTGCCTGGACCCTCTCCTAGCGAAGCAGATTaGAGCGCTGCTGGCTCACCCTCATGGGGCCCGAGAGGCTCAAGG +
Preference number: 1 (lower is better)
Translates to: NQTQSLPGPSPSEAD*SAAGSPSWGPRGSR
Trigger: CCTTGAGCCTCTCGGGCCCCATGAGGGTGAGCCAGCAGCGCTCCAATCTGCTTCGCTAGGAGAGGGTCCAGGCAGGGATTGTGTTTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR TCA 90 bp ACTGGGAGGAGTGAGTTCCATCTGCAGGGGAGCTCAGGAGACTCTTaGACTGGACTTAGCCCGAGTCCTGCAGGTAGAAGGCGCCGACCC +
Preference number: 1 (lower is better)
Translates to: TGRSEFHLQGSSGDS*TGLSPSPAGRRRRP
Trigger: GGGTCGGCGCCTTCTACCTGCAGGACTCGGGCTAAGTCCAGTTCAAGAGTCTCCTGAGCTCCCCTGCAGATGGAACTCACTCCTCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR CCA 90 bp CTTAAGTCAGAGCCACAGATGGGGAGGGACGCCGACAGGAAGGGCTaGAGGGACCTTCTAGGGGCTGGGTCTCCACTGAAGAGCATGCAT +
Preference number: 1 (lower is better)
Translates to: LKSEPQMGRDADRKG*RDLLGAGSPLKSMH
Trigger: ATGCATGCTCTTCAGTGGAGACCCAGCCCCTAGAAGGTCCCTCCAGCCCTTCCTGTCGGCGTCCCTCCCCATCTGTGGCTCTGACTTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR CCA 90 bp TATTCATTGAAGTCTGTGCACACACTGGGAGCACATTCCAGGGCTTaGCAGACATTGCCTGCAGAAGCCGGGCGGCCGCACCTGGGCTCG +
Preference number: 1 (lower is better)
Translates to: YSLKSVHTLGAHSRA*QTLPAEAGRPHLGS
Trigger: CGAGCCCAGGTGCGGCCGCCCGGCTTCTGCAGGCAATGTCTGCCAAGCCCTGGAATGTGCTCCCAGTGTGTGCACAGACTTCAATGAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR TCA 90 bp GGGCGGTCGGGACCATCACCAGATCTGCTGAGAGACTGGGAGGAGTaGGTTCCATCTGCAGGGGAGCTCAGGAGACTCTTGAACTGGACT +
Preference number: 1 (lower is better)
Translates to: GRSGPSPDLLRDWEE*VPSAGELRRLLNWT
Trigger: AGTCCAGTTCAAGAGTCTCCTGAGCTCCCCTGCAGATGGAACTCACTCCTCCCAGTCTCTCAGCAGATCTGGTGATGGTCCCGACCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR GCA 90 bp GTCACTGCCCGCGGGGACACAGCGGCATTTCTGGGGCACTCGGCATaGCGGGTTCCTAACCTCAATTATTCATTCTGCTCTCAGGCACCT +
Preference number: 1 (lower is better)
Translates to: VTARGDTAAFLGHSA*RVPNLNYSFCSQAP
Trigger: AGGTGCCTGAGAGCAGAATGAATAATTGAGGTTAGGAACCCGGCATGCCGAGTGCCCCAGAAATGCCGCTGTGTCCCCGCGGGCAGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR CCA 90 bp CGTCCAAGGCCGTCTTACAGCAGACACAGAACAGGAAGGAAAATTTaGCAAACGTGTGGCCCCACAGAGTCCAGGGAGAAGCCAGCCCGG +
Preference number: 1 (lower is better)
Translates to: RPRPSYSRHRTGRKI*QTCGPTESREKPAR
Trigger: CCGGGCTGGCTTCTCCCTGGACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCTGTAAGACGGCCTTGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR GCA 90 bp ACCATCACCAGATCTGCTGAGAGACTGGGAGGAGTGAGTTCCATCTaGAGGGGAGCTCAGGAGACTCTTGAACTGGACTTAGCCCGAGTC +
Preference number: 1 (lower is better)
Translates to: TITRSAERLGGVSSI*RGAQETLELDLARV
Trigger: GACTCGGGCTAAGTCCAGTTCAAGAGTCTCCTGAGCTCCCCTGCAGATGGAACTCACTCCTCCCAGTCTCTCAGCAGATCTGGTGATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR CCA 90 bp TTGCATCCCCAGGTGCTGTGTGTGCTGCGCCTGATCCAGCATTTCTaGTGCAAGGTGAAAGGACTCAGCCACTTTAGAAATCCGAAGCCG +
Preference number: 1 (lower is better)
Translates to: LHPQVLCVLRLIQHF*CKVKGLSHFRNPKP
Trigger: CGGCTTCGGATTTCTAAAGTGGCTGAGTCCTTTCACCTTGCACCAGAAATGCTGGATCAGGCGCAGCACACACAGCACCTGGGGATGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR TCA 90 bp GGCAGCTGGGTCCACTTATGCAATGTGGATCGGGCTTCTTACATCTaGAATCTGCGTCTCTATCCCTCCTCTGAGACCAGTGTCTCCTGC +
Preference number: 1 (lower is better)
Translates to: GSWVHLCNVDRASYI*NLRLYPSSETSVSC
Trigger: GCAGGAGACACTGGTCTCAGAGGAGGGATAGAGACGCAGATTTCAGATGTAAGAAGCCCGATCCACATTGCATAAGTGGACCCAGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR GCA 90 bp GGGTCCACTTATGCAATGTGGATCGGGCTTCTTACATCTGAAATCTaGGTCTCTATCCCTCCTCTGAGACCAGTGTCTCCTGCCAGCTTC +
Preference number: 1 (lower is better)
Translates to: GSTYAMWIGLLTSEI*VSIPPLRPVSPASF
Trigger: GAAGCTGGCAGGAGACACTGGTCTCAGAGGAGGGATAGAGACGCAGATTTCAGATGTAAGAAGCCCGATCCACATTGCATAAGTGGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR GCA 90 bp GGATGCTCCGAGACCGGCACCGGACGCCGCCTTCCACCGCTTCGCCAGGGCTGGGGCCGGCCGCATGGATaGTGGCCCCGTGCACGGCAG +
Preference number: 2 (lower is better)
Translates to: GCSETGTGRRLPPLRQGWGRPHG*WPRARQ
Trigger: CTGCCGTGCACGGGGCCAGCATCCATGCGGCCGGCC...CCAGCCCTGGCGAAGCGGTGGAAGGCGGCGTCCGGTGCCGGTCTCGGAGCATCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CCA 90 bp GGAGAAGCCAGCCCGGCCCCAGGCCGGCCGCATGGATGCTGGCCCCGTGCACGGCGGAGAGGGCTGGTCTaGGGGTGGGAGCTCAGCCGA +
Preference number: 2 (lower is better)
Translates to: GEASPAPGRPHGCWPRARRRGLV*GWELSR
Trigger: TCGGCTGAGCTCCCACCCCCAGACCAGCCCTCTCCG...CCGTGCACGGGGCCAGCATCCATGCGGCCGGCCTGGGGCCGGGCTGGCTTCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR CAA 90 bp CACGGAGAGGGCTGGTCTGGGGGTGGGAGCTCAGCCGAGTGGGTGTaGCGAGAGGCCAGGGCGCCGGCAGCCTGGCCATCTGCCTCGGGG +
Preference number: 2 (lower is better)
Translates to: HGEGWSGGGSSAEWV*REARAPAAWPSASG
Trigger: CCCCGAGGCAGATGGCCAGGCTGCCGGCGCCCTGGCCTCTCGCAACACCCACTCGGCTGAGCTCCCACCCCCAGACCAGCCCTCTCCGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR TCA 90 bp CGGGTCAGGGCCGGCGACAGGGGCAGGTGCGGGGGCGGCGCTTTGGTGCTGCGGGCCGGCAATTGTCCTTaGCCACGGACGGCCGCTTCA +
Preference number: 2 (lower is better)
Translates to: RVRAGDRGRCGGGALVLRAGNCP*PRTAAS
Trigger: TGAAGCGGCCGTCCGTGGTCAAGGACAATTGCCGGC...CCGCAGCACCAAAGCGCCGCCCCCGCACCTGCCCCTGTCGCCGGCCCTGACCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR GCA 90 bp TGGGGGTGGGAGCTCAGCCGAGTGGGTGTTGCGAGAGGCCAGGGCGCCGGCAGCGGTGCAGGCTCTGGGTaGCGCTCGTGGCAGGGGGCT +
Preference number: 2 (lower is better)
Translates to: WGWELSRVGVARGQGAGSGAGSG*RSWQGA
Trigger: AGCCCCCTGCCACGAGCGGCACCCAGAGCCTGCACC...GCTGCCGGCGCCCTGGCCTCTCGCAACACCCACTCGGCTGAGCTCCCACCCCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CCA 90 bp GGGCCACGTCGCCCCAGGCCGGGCCACACGGGAAGCACCCAGGCCGGTCCGGAGCCCTGGCCCTACGCCTaGAAGGCAGAGTCCTGGTCT +
Preference number: 2 (lower is better)
Translates to: GPRRPRPGHTGSTQAGPEPWPYA*KAESWS
Trigger: AGACCAGGACTCTGCCTTCCAGGCGTAGGGCCAGGG...CTCCGGACCGGCCTGGGTGCTTCCCGTGTGGCCCGGCCTGGGGCGACGTGGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR CCA 90 bp GGAGAAGCCAGCCCGGCCCCAGGCCGGCCGCATGGATGCTGGCCCCGTGCACGGGGGCATGGGCCTGTGTaGAAACCCCAGGGCTCCCTG +
Preference number: 2 (lower is better)
Translates to: GEASPAPGRPHGCWPRARGHGPV*KPQGSL
Trigger: CAGGGAGCCCTGGGGTTTCCACACAGGCCCATGCCC...CCGTGCACGGGGCCAGCATCCATGCGGCCGGCCTGGGGCCGGGCTGGCTTCTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR CCA 90 bp GTCTGGGGGTGGGAGCTCAGCCGAGTGGGTGTTGCGAGAGGCCAGGGCGCCGGCAGGGGGCTCCCCTTCTaGCTCGGGCCAGAAGCGCGG +
Preference number: 2 (lower is better)
Translates to: VWGWELSRVGVARGQGAGRGLPF*LGPEAR
Trigger: CCGCGCTTCTGGCCCGAGCCAGAAGGGGAGCCCCCT...GCCGGCGCCCTGGCCTCTCGCAACACCCACTCGGCTGAGCTCCCACCCCCAGAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR GCA 90 bp GAGGGCTGGTCTGGGGGTGGGAGCTCAGCCGAGTGGGTGTTGCGAGAGGCCAGGGGCCGGCCGCATGGATaGTGGCCCCGTGCACGGCAG +
Preference number: 2 (lower is better)
Translates to: EGWSGGGSSAEWVLREARGRPHG*WPRARQ
Trigger: CTGCCGTGCACGGGGCCAGCATCCATGCGGCCGGCC...CCTGGCCTCTCGCAACACCCACTCGGCTGAGCTCCCACCCCCAGACCAGCCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR GCA 90 bp GGGCCACGTCGCCCCAGGCCGGGCCACACGGGAAGCACCCAGGCCGGTCCGGAGTTCTCAGGGACTTCCTaGCCCGAGGGTCCCAGCATC +
Preference number: 2 (lower is better)
Translates to: GPRRPRPGHTGSTQAGPEFSGTS*PEGPSI
Trigger: GATGCTGGGACCCTCGGGGCAGGAAGTCCCTGAGAA...CTCCGGACCGGCCTGGGTGCTTCCCGTGTGGCCCGGCCTGGGGCGACGTGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR CCA 90 bp CGGGTCAGGGCCGGCGACAGGGGCAGGTGCGGGGGCGGCGCTTTGGTGCTGCGGTCCCAGAAGTCCAGCTaGTCCACGCGGCTGTGCATG +
Preference number: 2 (lower is better)
Translates to: RVRAGDRGRCGGGALVLRSQKSS*STRLCM
Trigger: CATGCACAGCCGCGTGGACCAGCTGGACTTCTGGGA...CCGCAGCACCAAAGCGCCGCCCCCGCACCTGCCCCTGTCGCCGGCCCTGACCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR TCA 90 bp GTCTGGGGGTGGGAGCTCAGCCGAGTGGGTGTTGCGAGAGGCCAGGGCGCCGGCGAGCTGGTCGGAGGGTaGCTTGCAGGAAGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: VWGWELSRVGVARGQGAGELVGG*LAGRPR
Trigger: CCTGGGCCTTCCTGCAAGTCACCCTCCGACCAGCTC...GCCGGCGCCCTGGCCTCTCGCAACACCCACTCGGCTGAGCTCCCACCCCCAGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR GCA 90 bp CAGGTGGTCTGCAATGTACTGGACGCCCTCCACCGCCCGGGTCAGGGCCGGCGATTTGGCCAGCCCTGGTaGCTGGGTGCCGTGGGGCGG +
Preference number: 2 (lower is better)
Translates to: QVVCNVLDALHRPGQGRRFGQPW*LGAVGR
Trigger: CCGCCCCACGGCACCCAGGCACCAGGGCTGGCCAAA...TCGCCGGCCCTGACCCGGGCGGTGGAGGGCGTCCAGTACATTGCAGACCACCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR GCA 90 bp CGGCGCTTTGGTGCTGCGGGTCTTGACCGTGGCGCTCGGGGACACCGAAGAGGGCAGCCGAGTGGGTGTTaGGAGAGGCCAGGGCGCCGG +
Preference number: 2 (lower is better)
Translates to: RRFGAAGLDRGARGHRRGQPSGC*ERPGRR
Trigger: CCGGCGCCCTGGCCTCTCGCAACACCCACTCGGCTG...CCCTCTTCGGTGTCCCCGAGCGCCACGGTCAAGACCCGCAGCACCAAAGCGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CCA 90 bp CGCTTTGGTGCTGCGGGTCTTGACCGTGGCGCTCGGGGACACCGAAGAGGGCTCCCCAGGCCGGCCGCATaGATGCTGGCCCCGTGCACG +
Preference number: 2 (lower is better)
Translates to: RFGAAGLDRGARGHRRGLPRPAA*MLAPCT
Trigger: CGTGCACGGGGCCAGCATCCATGCGGCCGGCCTGGG...GAGCCCTCTTCGGTGTCCCCGAGCGCCACGGTCAAGACCCGCAGCACCAAAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CCA 90 bp GGAGAAGCCAGCCCGGCCCCAGGCCGGCCGCATGGATGCTGGCCCCGTGCACGGCCGTCATGGAACAGGTaGGCCTTGGTCAGGTGGGTG +
Preference number: 2 (lower is better)
Translates to: GEASPAPGRPHGCWPRARPSWNR*ALVRWV
Trigger: CACCCACCTGACCAAGGCCCACCTGTTCCATGACGG...CCGTGCACGGGGCCAGCATCCATGCGGCCGGCCTGGGGCCGGGCTGGCTTCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CCA 90 bp ACGGTGAGGGCGGGTGCAGGCTCTGGGTGCCGCTCGTGGCAGGGGGCTCCCCTTGTACCCAGGTGGGCATaGTGTGCGTGCGTGGCGAGC +
Preference number: 2 (lower is better)
Translates to: TVRAGAGSGCRSWQGAPLVPRWA*CACVAS
Trigger: GCTCGCCACGCACGCACACCATGCCCACCTGGGTAC...AAGGGGAGCCCCCTGCCACGAGCGGCACCCAGAGCCTGCACCCGCCCTCACCGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CCA 90 bp CGCTTTGGTGCTGCGGGTCTTGACCGTGGCGCTCGGGGACACCGAAGAGGGCTCGGCGGGTGCAGGCTCTaGGTGCCGCTCGTGGCAGGG +
Preference number: 2 (lower is better)
Translates to: RFGAAGLDRGARGHRRGLGGCRL*VPLVAG
Trigger: CCCTGCCACGAGCGGCACCCAGAGCCTGCACCCGCC...GAGCCCTCTTCGGTGTCCCCGAGCGCCACGGTCAAGACCCGCAGCACCAAAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR TCA 90 bp TGCTGGACGCTGAGGGACCTGGCTTTGGCCAGCCCTGGTGCCTGGGTGCCGTGGCGGACGGCCGCTTCATaGGGAGCAGGCGTGGCACGA +
Preference number: 2 (lower is better)
Translates to: CWTLRDLALASPGAWVPWRTAAS*GAGVAR
Trigger: TCGTGCCACGCCTGCTCCTCATGAAGCGGCCGTCCG...CCACGGCACCCAGGCACCAGGGCTGGCCAAAGCCAGGTCCCTCAGCGTCCAGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR TCA 90 bp GTCTGCAATGTACTGGACGCCCTCCACCGCCCGGGTCAGGGCCGGCGACAGGGGCCTTGGTCAGGTGGGTaGCCGCGAAGTCCCCGTCAG +
Preference number: 2 (lower is better)
Translates to: VCNVLDALHRPGQGRRQGPWSGG*PRSPRQ
Trigger: CTGACGGGGACTTCGCGGTCACCCACCTGACCAAGG...CCCCTGTCGCCGGCCCTGACCCGGGCGGTGGAGGGCGTCCAGTACATTGCAGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627000.1
3UTR-3UTR GCA 90 bp GGAGAAGCCAGCCCGGCCCCAGGCCGGCCGCATGGATGCTGGCCCCGTGCACGGCGGGCTCCAGGGTCATaGCTGGAAACATTTCAGGCC +
Preference number: 2 (lower is better)
Translates to: GEASPAPGRPHGCWPRARRAPGS*LETFQA
Trigger: GGCCTGAAATGTTTCCAGGCATGACCCTGGAGCCCG...CCGTGCACGGGGCCAGCATCCATGCGGCCGGCCTGGGGCCGGGCTGGCTTCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR GCA 90 bp GGGTGGGAGCTCAGCCGAGTGGGTGTTGCGAGAGGCCAGGGCGCCGGCAGCCTGCCAGGGCTGGACATGTaGTGGACGCTGAGGGACCTG +
Preference number: 2 (lower is better)
Translates to: GWELSRVGVARGQGAGSLPGLDM*WTLRDL
Trigger: CAGGTCCCTCAGCGTCCAGCACATGTCCAGCCCTGG...CAGGCTGCCGGCGCCCTGGCCTCTCGCAACACCCACTCGGCTGAGCTCCCACCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CCA 90 bp GGGGGTCACAGCCCTGGCAAGGTGGGTTCTAGGCAAGCTGTCCACCCCCGGGAACGGCCGCATGGATGCTaGCCCCGTGCACGGCAGCCC +
Preference number: 2 (lower is better)
Translates to: GGHSPGKVGSRQAVHPRERPHGC*PRARQP
Trigger: GGGCTGCCGTGCACGGGGCCAGCATCCATGCGGCCG...TTCCCGGGGGTGGACAGCTTGCCTAGAACCCACCTTGCCAGGGCTGTGACCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR CCA 90 bp CGGCATCGTCTCGGGGAACACAGTACTGGATGCTCCGAGACCGGCACCGGACGCCGGCCGCATGGATGCTaGCCCCGTGCACGGCAGCCC +
Preference number: 2 (lower is better)
Translates to: RHRLGEHSTGCSETGTGRRPHGC*PRARQP
Trigger: GGGCTGCCGTGCACGGGGCCAGCATCCATGCGGCCG...GCGTCCGGTGCCGGTCTCGGAGCATCCAGTACTGTGTTCCCCGAGACGATGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CCA 90 bp GGTCTGGGGGTGGGAGCTCAGCCGAGTGGGTGTTGCGAGAGGCCAGGGCGCCGGTGCACCCGCCCGTCATaGAACAGGTGGGCCTTGGTC +
Preference number: 2 (lower is better)
Translates to: GLGVGAQPSGCCERPGRRCTRPS*NRWALV
Trigger: GACCAAGGCCCACCTGTTCCATGACGGGCGGGTGCA...CCGGCGCCCTGGCCTCTCGCAACACCCACTCGGCTGAGCTCCCACCCCCAGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR TCA 90 bp TGCTGGACGCTGAGGGACCTGGCTTTGGCCAGCCCTGGTGCCTGGGTGCCGTGGGACACAGAAGGACGGTaGGGGCGGGTGCAGGCTCTG +
Preference number: 2 (lower is better)
Translates to: CWTLRDLALASPGAWVPWDTEGR*GRVQAL
Trigger: CAGAGCCTGCACCCGCCCTCACCGTCCTTCTGTGTC...CCACGGCACCCAGGCACCAGGGCTGGCCAAAGCCAGGTCCCTCAGCGTCCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR TCA 90 bp CTTCAGGTGGTCTGCAATGTACTGGACGCCCTCCACCGCCCGGGTCAGGGCCGGTGTCCGGCCGCCAGATaGGCTCGGAGGGGATGCGGA +
Preference number: 2 (lower is better)
Translates to: LQVVCNVLDALHRPGQGRCPAAR*ARRGCG
Trigger: TCCGCATCCCCTCCGAGCTCATCTGGCGGCCGGACA...CCGGCCCTGACCCGGGCGGTGGAGGGCGTCCAGTACATTGCAGACCACCTGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627000.1
3UTR-3UTR GCA 90 bp CAAGGGCCCCTTGGGGCGGTCGGGACCATCACCAGATCTGCTGAGAGACTGGGAGGCCGGCCGCATGGATaGTGGCCCCGTGCACGGCAG +
Preference number: 2 (lower is better)
Translates to: QGPLGAVGTITRSAERLGGRPHG*WPRARQ
Trigger: CTGCCGTGCACGGGGCCAGCATCCATGCGGCCGGCC...TCCCAGTCTCTCAGCAGATCTGGTGATGGTCCCGACCGCCCCAAGGGGCCCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR GCA 90 bp ACCACGCTTCCTGAGAGGAGGGCCACGTCGCCCCAGGCCGGGCCACACGGGAAGGCCATCTTTAGGGGGTaGACTGCCGGGCTCCAGGGT +
Preference number: 2 (lower is better)
Translates to: TTLPERRATSPQAGPHGKAIFRG*TAGLQG
Trigger: ACCCTGGAGCCCGGCAGTGCACCCCCTAAAGATGGC...CTTCCCGTGTGGCCCGGCCTGGGGCGACGTGGCCCTCCTCTCAGGAAGCGTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR GCA 90 bp CTTCAGGTGGTCTGCAATGTACTGGACGCCCTCCACCGCCCGGGTCAGGGCCGGGCCGGGGGAGTCCACTaGACCCGCCCGTCATGGAAC +
Preference number: 2 (lower is better)
Translates to: LQVVCNVLDALHRPGQGRAGGVH*TRPSWN
Trigger: GTTCCATGACGGGCGGGTGCAGTGGACTCCCCCGGC...CCGGCCCTGACCCGGGCGGTGGAGGGCGTCCAGTACATTGCAGACCACCTGAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CCA 90 bp AGGCGTGGCACGATGTCCAGGAAGACCCTGCGTACCCAGGTGGGCATGGTGTGCCGGCCGCATGGATGCTaGCCCCGTGCACGGCAGCCC +
Preference number: 2 (lower is better)
Translates to: RRGTMSRKTLRTQVGMVCRPHGC*PRARQP
Trigger: GGGCTGCCGTGCACGGGGCCAGCATCCATGCGGCCG...GCACACCATGCCCACCTGGGTACGCAGGGTCTTCCTGGACATCGTGCCACGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CCA 90 bp GAGCACATTCCAGGGCTTGGCAGACATTGCCTGCAGAAGCCGGGCGGCCGCACCGGAGGCAGAAGGGGCTaGGAAGCCCTGGCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: EHIPGLGRHCLQKPGGRTGGRRG*EALARA
Trigger: GGCCCTGGCCAGGGCTTCCCAGCCCCTTCTGCCTCC...GGTGCGGCCGCCCGGCTTCTGCAGGCAATGTCTGCCAAGCCCTGGAATGTGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR CCA 90 bp GGGTGGGAGCTCAGCCGAGTGGGTGTTGCGAGAGGCCAGGGCGCCGGCAGCCTGTCCCAGAAGTCCAGCTaGTCCACGCGGCTGTGCATG +
Preference number: 2 (lower is better)
Translates to: GWELSRVGVARGQGAGSLSQKSS*STRLCM
Trigger: CATGCACAGCCGCGTGGACCAGCTGGACTTCTGGGA...CAGGCTGCCGGCGCCCTGGCCTCTCGCAACACCCACTCGGCTGAGCTCCCACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR TCA 90 bp GGGGGTCACAGCCCTGGCAAGGTGGGTTCTAGGCAAGCTGTCCACCCCCGGGAAACCCGGGGGTGGGGGTaGCCAGCAGCAGTTCAGAGG +
Preference number: 2 (lower is better)
Translates to: GGHSPGKVGSRQAVHPRETRGWG*PAAVQR
Trigger: CCTCTGAACTGCTGCTGGTCACCCCCACCCCCGGGT...TTCCCGGGGGTGGACAGCTTGCCTAGAACCCACCTTGCCAGGGCTGTGACCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR TCA 90 bp CGGCATCGTCTCGGGGAACACAGTACTGGATGCTCCGAGACCGGCACCGGACGCGCTTCCAGGGGCTGCTaGGGAGGGAGCTGGTCGGAG +
Preference number: 2 (lower is better)
Translates to: RHRLGEHSTGCSETGTGRASRGC*GGSWSE
Trigger: CTCCGACCAGCTCCCTCCTCAGCAGCCCCTGGAAGC...GCGTCCGGTGCCGGTCTCGGAGCATCCAGTACTGTGTTCCCCGAGACGATGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR GCA 90 bp GGGGGTCACAGCCCTGGCAAGGTGGGTTCTAGGCAAGCTGTCCACCCCCGGGAAGTGCTGAGCTCTGCCTaGCCTGCCAGGACGGAGGGC +
Preference number: 2 (lower is better)
Translates to: GGHSPGKVGSRQAVHPREVLSSA*PARTEG
Trigger: GCCCTCCGTCCTGGCAGGGCAGGCAGAGCTCAGCAC...TTCCCGGGGGTGGACAGCTTGCCTAGAACCCACCTTGCCAGGGCTGTGACCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR GCA 90 bp GAGCACATTCCAGGGCTTGGCAGACATTGCCTGCAGAAGCCGGGCGGCCGCACCCCAGGGGGCTGGGGATaGCCAGGATTTGGCACGGGG +
Preference number: 2 (lower is better)
Translates to: EHIPGLGRHCLQKPGGRTPGGWG*PGFGTG
Trigger: CCCCGTGCCAAATCCTGGGCATCCCCAGCCCCCTGG...GGTGCGGCCGCCCGGCTTCTGCAGGCAATGTCTGCCAAGCCCTGGAATGTGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR GCA 90 bp CGGCATCGTCTCGGGGAACACAGTACTGGATGCTCCGAGACCGGCACCGGACGCGCCGGGGGAGTCCACTaGACCCGCCCGTCATGGAAC +
Preference number: 2 (lower is better)
Translates to: RHRLGEHSTGCSETGTGRAGGVH*TRPSWN
Trigger: GTTCCATGACGGGCGGGTGCAGTGGACTCCCCCGGC...GCGTCCGGTGCCGGTCTCGGAGCATCCAGTACTGTGTTCCCCGAGACGATGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR GCA 90 bp TGGGTGCCGCTCGTGGCAGGGGGCTCCCCTTCTGGCTCGGGCCAGAAGCGCGGGGCACTGGCCATCTTATaGATGGACTCGATGAGCCGC +
Preference number: 2 (lower is better)
Translates to: WVPLVAGGSPSGSGQKRGALAIL*MDSMSR
Trigger: GCGGCTCATCGAGTCCATGCATAAGATGGCCAGTGC...CCCGCGCTTCTGGCCCGAGCCAGAAGGGGAGCCCCCTGCCACGAGCGGCACCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CCA 90 bp GATGGGGAGGGACGCCGACAGGAAGGGCTGGAGGGACCTTCTAGGGGCTGGGTCGCTGGCTCACCCTCATaGGGCCCGAGAGGCTCAAGG +
Preference number: 2 (lower is better)
Translates to: DGEGRRQEGLEGPSRGWVAGSPS*GPRGSR
Trigger: CCTTGAGCCTCTCGGGCCCCATGAGGGTGAGCCAGC...GACCCAGCCCCTAGAAGGTCCCTCCAGCCCTTCCTGTCGGCGTCCCTCCCCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR CCA 90 bp CCTGCCCCGAGGGTCCCAGCATCTCCCAGGTGGAGGTCCTCAAGGATGCCCCCAAGAGCTGGTCCCGCGTaGGCCTCCCGATTCTCCCCA +
Preference number: 2 (lower is better)
Translates to: PAPRVPASPRWRSSRMPPRAGPA*ASRFSP
Trigger: TGGGGAGAATCGGGAGGCCCACGCGGGACCAGCTCT...TGGGGGCATCCTTGAGGACCTCCACCTGGGAGATGCTGGGACCCTCGGGGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR CCA 90 bp GGTCTGGGGGTGGGAGCTCAGCCGAGTGGGTGTTGCGAGAGGCCAGGGCGCCGGCATGAGGAGCAGGCGTaGCACGATGTCCAGGAAGAC +
Preference number: 2 (lower is better)
Translates to: GLGVGAQPSGCCERPGRRHEEQA*HDVQED
Trigger: GTCTTCCTGGACATCGTGCCACGCCTGCTCCTCATG...CCGGCGCCCTGGCCTCTCGCAACACCCACTCGGCTGAGCTCCCACCCCCAGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CCA 90 bp CCGGCAGGAGGGTCCCCCGGCAGGAGCGTCCCAGCCACTCCGCAGTCACTCCTGCTCCAGGGTCATGCCTaGAAACATTTCAGGCCTCCC +
Preference number: 2 (lower is better)
Translates to: PAGGSPGRSVPATPQSLLLQGHA*KHFRPP
Trigger: GGGAGGCCTGAAATGTTTCCAGGCATGACCCTGGAG...CAGGAGTGACTGCGGAGTGGCTGGGACGCTCCTGCCGGGGGACCCTCCTGCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR CCA 90 bp CTGGACATGTGCTGGACGCTGAGGGACCTGGCTTTGGCCAGCCCTGGTGCCTGGCCCTGCGTACCCAGGTaGGCATGGTGTGCGTGCGTG +
Preference number: 2 (lower is better)
Translates to: LDMCWTLRDLALASPGAWPCVPR*AWCACV
Trigger: CACGCACGCACACCATGCCCACCTGGGTACGCAGGG...CCAGGCACCAGGGCTGGCCAAAGCCAGGTCCCTCAGCGTCCAGCACATGTCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CCA 90 bp CAGCCTGGCCATCTGCCTCGGGGGCGGCATCGTCTCGGGGAACACAGTACTGGACCCTGCGTACCCAGGTaGGCATGGTGTGCGTGCGTG +
Preference number: 2 (lower is better)
Translates to: QPGHLPRGRHRLGEHSTGPCVPR*AWCACV
Trigger: CACGCACGCACACCATGCCCACCTGGGTACGCAGGG...TCCAGTACTGTGTTCCCCGAGACGATGCCGCCCCCGAGGCAGATGGCCAGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR GCA 90 bp CAGGCTCCCGGTCCCTTCCTAGATCATGCCAGCCAGCCAGGGCGGCAGGAAGAGCCAGGGCTGGACATGTaGTGGACGCTGAGGGACCTG +
Preference number: 2 (lower is better)
Translates to: QAPGPFLDHASQPGRQEEPGLDM*WTLRDL
Trigger: CAGGTCCCTCAGCGTCCAGCACATGTCCAGCCCTGG...CTCTTCCTGCCGCCCTGGCTGGCTGGCATGATCTAGGAAGGGACCGGGAGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CCA 90 bp TGCAGGCTCTGGGTGCCGCTCGTGGCAGGGGGCTCCCCTTCTGGCTCGGGCCAGAATTTGGCAAACGTGTaGCCCCACAGAGTCCAGGGA +
Preference number: 2 (lower is better)
Translates to: CRLWVPLVAGGSPSGSGQNLANV*PHRVQG
Trigger: TCCCTGGACTCTGTGGGGCCACACGTTTGCCAAATT...CTGGCCCGAGCCAGAAGGGGAGCCCCCTGCCACGAGCGGCACCCAGAGCCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR GCA 90 bp TGTCTCCTCCTGAACCGATGTCACTCACAGGCAGGGGACACGCCATCCTGGCCCGGGTGGGGCAGCCTGTaGCCATCCCAAGGGGAAGTG +
Preference number: 2 (lower is better)
Translates to: CLLLNRCHSQAGDTPSWPGWGSL*PSQGEV
Trigger: CACTTCCCCTTGGGATGGGCACAGGCTGCCCCACCC...GGGCCAGGATGGCGTGTCCCCTGCCTGTGAGTGACATCGGTTCAGGAGGAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR CCA 90 bp TGGATGCTCCGAGACCGGCACCGGACGCCGCCTTCCACCGCTTCGCCAGGGCTGAATTTGGCAAACGTGTaGCCCCACAGAGTCCAGGGA +
Preference number: 2 (lower is better)
Translates to: WMLRDRHRTPPSTASPGLNLANV*PHRVQG
Trigger: TCCCTGGACTCTGTGGGGCCACACGTTTGCCAAATT...CAGCCCTGGCGAAGCGGTGGAAGGCGGCGTCCGGTGCCGGTCTCGGAGCATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CCA 90 bp GAACCAGGGCCCAGGTCTGGACTCCATTCGGGACCTTCCCAGCTCCGGGGAATCGGTCTCCAGACTCGCTaGGGCTGGGTGTTCCTGTCC +
Preference number: 2 (lower is better)
Translates to: EPGPRSGLHSGPSQLRGIGLQTR*GWVFLS
Trigger: GGACAGGAACACCCAGCCCCAGCGAGTCTGGAGACC...GATTCCCCGGAGCTGGGAAGGTCCCGAATGGAGTCCAGACCTGGGCCCTGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR CCA 90 bp GCATCCACGATGACCCACTCGCCACTCTCCCAGAAGTCCAGCTGGTCCACGCGGTGCACCCGCCCGTCATaGAACAGGTGGGCCTTGGTC +
Preference number: 2 (lower is better)
Translates to: ASTMTHSPLSQKSSWSTRCTRPS*NRWALV
Trigger: GACCAAGGCCCACCTGTTCCATGACGGGCGGGTGCA...CCGCGTGGACCAGCTGGACTTCTGGGAGAGTGGCGAGTGGGTCATCGTGGATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR CAA 90 bp GGGGCACTGGCCATCTTATGCATGGACTCGATGAGCCGCCGGCAATaGTCCTTGACCACGGACGGCCGCTTCATGAGGAGCAGGCGTGGC +
Preference number: 2 (lower is better)
Translates to: GALAILCMDSMSRRQ*SLTTDGRFMRSRRG
Trigger: GCCACGCCTGCTCCTCATGAAGCGGCCGTCCGTGGTCAAGGACAATTGCCGGCGGCTCATCGAGTCCATGCATAAGATGGCCAGTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CCA 90 bp GGGGGTCACAGCCCTGGCAAGGTGGGTTCTAGGCAAGCTGTCCACCCCCGGGAAAGGCCACAGTCCAACTaGAAGCAGCTCCACACTCGG +
Preference number: 2 (lower is better)
Translates to: GGHSPGKVGSRQAVHPRERPQSN*KQLHTR
Trigger: CCGAGTGTGGAGCTGCTTCCAGTTGGACTGTGGCCT...TTCCCGGGGGTGGACAGCTTGCCTAGAACCCACCTTGCCAGGGCTGTGACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR CCA 90 bp ATTTGGCAAACGTGTGGCCCCACAGAGTCCAGGGAGAAGCCAGCCCGGCCCCAGGGGGGCAGCAGAATGTaGACCACTCAGCAGGAGGCT +
Preference number: 2 (lower is better)
Translates to: IWQTCGPTESREKPARPQGGSRM*TTQQEA
Trigger: AGCCTCCTGCTGAGTGGTCCACATTCTGCTGCCCCC...CTGGGGCCGGGCTGGCTTCTCCCTGGACTCTGTGGGGCCACACGTTTGCCAAAT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR CCA 90 bp GGGCCACGTCGCCCCAGGCCGGGCCACACGGGAAGCACCCAGGCCGGTCCGGAGAAGGTTAATTTGGCGTaGTGGGAATATGGTGCTTTA +
Preference number: 2 (lower is better)
Translates to: GPRRPRPGHTGSTQAGPEKVNLA*WEYGAL
Trigger: TAAAGCACCATATTCCCACCACGCCAAATTAACCTT...CTCCGGACCGGCCTGGGTGCTTCCCGTGTGGCCCGGCCTGGGGCGACGTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR TCA 90 bp GATGGGGAGGGACGCCGACAGGAAGGGCTGGAGGGACCTTCTAGGGGCTGGGTCAGCTCAGGAGACTCTTaGACTGGACTTAGCCCGAGT +
Preference number: 2 (lower is better)
Translates to: DGEGRRQEGLEGPSRGWVSSGDS*TGLSPS
Trigger: ACTCGGGCTAAGTCCAGTTCAAGAGTCTCCTGAGCT...GACCCAGCCCCTAGAAGGTCCCTCCAGCCCTTCCTGTCGGCGTCCCTCCCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR TCA 90 bp CAGCCTGGCCATCTGCCTCGGGGGCGGCATCGTCTCGGGGAACACAGTACTGGATATGCATGGACTCGATaGGCCGCCGGCAATTGTCCT +
Preference number: 2 (lower is better)
Translates to: QPGHLPRGRHRLGEHSTGYAWTR*AAGNCP
Trigger: AGGACAATTGCCGGCGGCTCATCGAGTCCATGCATA...TCCAGTACTGTGTTCCCCGAGACGATGCCGCCCCCGAGGCAGATGGCCAGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR GCA 90 bp TGTCTCCTCCTGAACCGATGTCACTCACAGGCAGGGGACACGCCATCCTGGCCCTCTGCTCCAAGCCACTaGCTCCTGAGGCCACAGTCC +
Preference number: 2 (lower is better)
Translates to: CLLLNRCHSQAGDTPSWPSAPSH*LLRPQS
Trigger: GGACTGTGGCCTCAGGAGGCAGTGGCTTGGAGCAGA...GGGCCAGGATGGCGTGTCCCCTGCCTGTGAGTGACATCGGTTCAGGAGGAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR GCA 90 bp GAGCACATTCCAGGGCTTGGCAGACATTGCCTGCAGAAGCCGGGCGGCCGCACCACGGATAGAGTGCCATaGACACACCGGCACCTCCAT +
Preference number: 2 (lower is better)
Translates to: EHIPGLGRHCLQKPGGRTTDRVP*THRHLH
Trigger: ATGGAGGTGCCGGTGTGTGCATGGCACTCTATCCGT...GGTGCGGCCGCCCGGCTTCTGCAGGCAATGTCTGCCAAGCCCTGGAATGTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR GCA 90 bp GGCATCGTCTCGGGGAACACAGTACTGGATGCTCCGAGACCGGCACCGGACGCCGCACTGGCCATCTTATaGATGGACTCGATGAGCCGC +
Preference number: 2 (lower is better)
Translates to: GIVSGNTVLDAPRPAPDAALAIL*MDSMSR
Trigger: GCGGCTCATCGAGTCCATGCATAAGATGGCCAGTGC...GGCGTCCGGTGCCGGTCTCGGAGCATCCAGTACTGTGTTCCCCGAGACGATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR GCA 90 bp TTCCAGTCCTCCTTCACCGAGAAGTCTGTGTCTTCGGCCTTCAGGTGGTCTGCAGGTGCAGGCTCTGGGTaGCGCTCGTGGCAGGGGGCT +
Preference number: 2 (lower is better)
Translates to: FQSSFTEKSVSSAFRWSAGAGSG*RSWQGA
Trigger: AGCCCCCTGCCACGAGCGGCACCCAGAGCCTGCACC...TGCAGACCACCTGAAGGCCGAAGACACAGACTTCTCGGTGAAGGAGGACTGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR GCA 90 bp CGTACTTCCAGTCCTCCTTCACCGAGAAGTCTGTGTCTTCGGCCTTCAGGTGGTTTTGGCCAGCCCTGGTaGCTGGGTGCCGTGGGGCGG +
Preference number: 2 (lower is better)
Translates to: RTSSPPSPRSLCLRPSGGFGQPW*LGAVGR
Trigger: CCGCCCCACGGCACCCAGGCACCAGGGCTGGCCAAA...ACCACCTGAAGGCCGAAGACACAGACTTCTCGGTGAAGGAGGACTGGAAGTACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CCA 90 bp GATGGGGAGGGACGCCGACAGGAAGGGCTGGAGGGACCTTCTAGGGGCTGGGTCAATTTGGCAAACGTGTaGCCCCACAGAGTCCAGGGA +
Preference number: 2 (lower is better)
Translates to: DGEGRRQEGLEGPSRGWVNLANV*PHRVQG
Trigger: TCCCTGGACTCTGTGGGGCCACACGTTTGCCAAATT...GACCCAGCCCCTAGAAGGTCCCTCCAGCCCTTCCTGTCGGCGTCCCTCCCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR CCA 90 bp CCCTTCTGGCTCGGGCCAGAAGCGCGGGGCACTGGCCATCTTATGCATGGACTCCATGAGGAGCAGGCGTaGCACGATGTCCAGGAAGAC +
Preference number: 2 (lower is better)
Translates to: PFWLGPEARGTGHLMHGLHEEQA*HDVQED
Trigger: GTCTTCCTGGACATCGTGCCACGCCTGCTCCTCATG...GAGTCCATGCATAAGATGGCCAGTGCCCCGCGCTTCTGGCCCGAGCCAGAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR CAA 90 bp CTGGCCATCTTATGCATGGACTCGATGAGCCGCCGGCAATTGTCCTaGACCACGGACGGCCGCTTCATGAGGAGCAGGCGTGGCACGATG +
Preference number: 2 (lower is better)
Translates to: LAILCMDSMSRRQLS*TTDGRFMRSRRGTM
Trigger: CATCGTGCCACGCCTGCTCCTCATGAAGCGGCCGTCCGTGGTCAAGGACAATTGCCGGCGGCTCATCGAGTCCATGCATAAGATGGCCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR TCA 90 bp TGTCTCCTCCTGAACCGATGTCACTCACAGGCAGGGGACACGCCATCCTGGCCCAGAGACTGGGAGGAGTaGGTTCCATCTGCAGGGGAG +
Preference number: 2 (lower is better)
Translates to: CLLLNRCHSQAGDTPSWPRDWEE*VPSAGE
Trigger: CTCCCCTGCAGATGGAACTCACTCCTCCCAGTCTCT...GGGCCAGGATGGCGTGTCCCCTGCCTGTGAGTGACATCGGTTCAGGAGGAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR GCA 90 bp TGCCCCCACCAGCTCCCCACAGCTACTGTAGCAGGAAGTCCTTCTTCCCGAACCAGCAGATTGGAGCGCTaGTGGCTCACCCTCATGGGG +
Preference number: 2 (lower is better)
Translates to: CPHQLPTATVAGSPSSRTSRLER*WLTLMG
Trigger: CCCCATGAGGGTGAGCCAGCAGCGCTCCAATCTGCT...GGTTCGGGAAGAAGGACTTCCTGCTACAGTAGCTGTGGGGAGCTGGTGGGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR GCA 90 bp CAGGCTCCCGGTCCCTTCCTAGATCATGCCAGCCAGCCAGGGCGGCAGGAAGAGTCTTGCATGTGCATTTaGACGGAGAGGGCTGGTCTG +
Preference number: 2 (lower is better)
Translates to: QAPGPFLDHASQPGRQEESCMCI*TERAGL
Trigger: CAGACCAGCCCTCTCCGTGCAAATGCACATGCAAGA...CTCTTCCTGCCGCCCTGGCTGGCTGGCATGATCTAGGAAGGGACCGGGAGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CCA 90 bp CGGCATTTCTGGGGCACTCGGCATGCCGGGTTCCTAACCTCAATTATTCATTCTCCCAGGCCGGCCGCATaGATGCTGGCCCCGTGCACG +
Preference number: 2 (lower is better)
Translates to: RHFWGTRHAGFLTSIIHSPRPAA*MLAPCT
Trigger: CGTGCACGGGGCCAGCATCCATGCGGCCGGCCTGGG...AGAATGAATAATTGAGGTTAGGAACCCGGCATGCCGAGTGCCCCAGAAATGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR CCA 90 bp CATCTTATGCATGGACTCGATGAGCCGCCGGCAATTGTCCTTGACCACGGACGGGTACCCAGGTGGGCATaGTGTGCGTGCGTGGCGAGC +
Preference number: 2 (lower is better)
Translates to: HLMHGLDEPPAIVLDHGRVPRWA*CACVAS
Trigger: GCTCGCCACGCACGCACACCATGCCCACCTGGGTAC...CCGTCCGTGGTCAAGGACAATTGCCGGCGGCTCATCGAGTCCATGCATAAGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR TCA 90 bp TACTTCCAGTCCTCCTTCACCGAGAAGTCTGTGTCTTCGGCCTTCAGGTGGTCTCGGACGGCCGCTTCATaGGGAGCAGGCGTGGCACGA +
Preference number: 2 (lower is better)
Translates to: YFQSSFTEKSVSSAFRWSRTAAS*GAGVAR
Trigger: TCGTGCCACGCCTGCTCCTCATGAAGCGGCCGTCCG...AGACCACCTGAAGGCCGAAGACACAGACTTCTCGGTGAAGGAGGACTGGAAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR TCA 90 bp TACTTCCAGTCCTCCTTCACCGAGAAGTCTGTGTCTTCGGCCTTCAGGTGGTCTGCTTCCAGGGGCTGCTaGGGAGGGAGCTGGTCGGAG +
Preference number: 2 (lower is better)
Translates to: YFQSSFTEKSVSSAFRWSASRGC*GGSWSE
Trigger: CTCCGACCAGCTCCCTCCTCAGCAGCCCCTGGAAGC...AGACCACCTGAAGGCCGAAGACACAGACTTCTCGGTGAAGGAGGACTGGAAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR GCA 90 bp ACACAGCGGCATTTCTGGGGCACTCGGCATGCCGGGTTCCTAACCTCAATTATTGCGGATCTCCCGGGCTaGGCGCCAAGGTGGAAACCC +
Preference number: 2 (lower is better)
Translates to: TQRHFWGTRHAGFLTSIIADLPG*APRWKP
Trigger: GGGTTTCCACCTTGGCGCGCAGCCCGGGAGATCCGC...AATAATTGAGGTTAGGAACCCGGCATGCCGAGTGCCCCAGAAATGCCGCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR GCA 90 bp AGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCGACGGTGAGGGCGGGTaGAGGCTCTGGGTGCCGCTC +
Preference number: 2 (lower is better)
Translates to: SRHRTGRKIWQTCGPTESDGEGG*RLWVPL
Trigger: GAGCGGCACCCAGAGCCTGCACCCGCCCTCACCGTC...GGACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CCA 90 bp TGCCAGGACGGAGGGCATGGGCCTGTGTGGAAACCCCAGGGCTCCCTGACTCCCACAGGAAGGAAAATTTaGCAAACGTGTGGCCCCACA +
Preference number: 2 (lower is better)
Translates to: CQDGGHGPVWKPQGSLTPTGRKI*QTCGPT
Trigger: TGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGT...GGGAGTCAGGGAGCCCTGGGGTTTCCACACAGGCCCATGCCCTCCGTCCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR CCA 90 bp CGTACTTCCAGTCCTCCTTCACCGAGAAGTCTGTGTCTTCGGCCTTCAGGTGGTGGGAGCTCAGCCGAGTaGGTGTTGCGAGAGGCCAGG +
Preference number: 2 (lower is better)
Translates to: RTSSPPSPRSLCLRPSGGGSSAE*VLREAR
Trigger: CCTGGCCTCTCGCAACACCCACTCGGCTGAGCTCCC...ACCACCTGAAGGCCGAAGACACAGACTTCTCGGTGAAGGAGGACTGGAAGTACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CCA 90 bp CACCGAGAAGTCTGTGTCTTCGGCCTTCAGGTGGTCTGCAATGTACTGGACGCCTTGCACGGAGAGGGCTaGTCTGGGGGTGGGAGCTCA +
Preference number: 2 (lower is better)
Translates to: HREVCVFGLQVVCNVLDALHGEG*SGGGSS
Trigger: TGAGCTCCCACCCCCAGACCAGCCCTCTCCGTGCAA...GGCGTCCAGTACATTGCAGACCACCTGAAGGCCGAAGACACAGACTTCTCGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR CAA 90 bp TTATTCATTGAAGTCTGTGCACACACTGGGAGCACATTCCAGGGCTaGGCAGACATTGCCTGCAGAAGCCGGGCGGCCGCACCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: LFIEVCAHTGSTFQG*ADIACRSRAAAPGL
Trigger: GAGCCCAGGTGCGGCCGCCCGGCTTCTGCAGGCAATGTCTGCCAAGCCCTGGAATGTGCTCCCAGTGTGTGCACAGACTTCAATGAATAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR TCA 90 bp GAAGTCTGTGTCTTCGGCCTTCAGGTGGTCTGCAATGTACTGGACGCCCTCCACACATGTGCTGGACGCTaGGGGACCTGGCTTTGGCCA +
Preference number: 2 (lower is better)
Translates to: EVCVFGLQVVCNVLDALHTCAGR*GTWLWP
Trigger: TGGCCAAAGCCAGGTCCCTCAGCGTCCAGCACATGT...GTGGAGGGCGTCCAGTACATTGCAGACCACCTGAAGGCCGAAGACACAGACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR GCA 90 bp CGGCATTTCTGGGGCACTCGGCATGCCGGGTTCCTAACCTCAATTATTCATTCTGAGCTCTGCCTGCCCTaGCAGGACGGAGGGCATGGG +
Preference number: 2 (lower is better)
Translates to: RHFWGTRHAGFLTSIIHSELCLP*QDGGHG
Trigger: CCCATGCCCTCCGTCCTGGCAGGGCAGGCAGAGCTC...AGAATGAATAATTGAGGTTAGGAACCCGGCATGCCGAGTGCCCCAGAAATGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR CCA 90 bp TACTTCCAGTCCTCCTTCACCGAGAAGTCTGTGTCTTCGGCCTTCAGGTGGTCTGCGAGGGGTGGGGGCTaGCTTTCTCAGCTTCCAGGG +
Preference number: 2 (lower is better)
Translates to: YFQSSFTEKSVSSAFRWSARGGG*LSQLPG
Trigger: CCCTGGAAGCTGAGAAAGCCAGCCCCCACCCCTCGC...AGACCACCTGAAGGCCGAAGACACAGACTTCTCGGTGAAGGAGGACTGGAAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR CAA 90 bp CCGTCCAAGGCCGTCTTACAGCAGACACAGAACAGGAAGGAAAATTaGGCAAACGTGTGGCCCCACAGAGTCCAGGGAGAAGCCAGCCCG +
Preference number: 2 (lower is better)
Translates to: PSKAVLQQTQNRKEN*ANVWPHRVQGEASP
Trigger: CGGGCTGGCTTCTCCCTGGACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCTGTAAGACGGCCTTGGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR TCA 90 bp CAGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCGACACAGAAGGACGGTaGGGGCGGGTGCAGGCTCTG +
Preference number: 2 (lower is better)
Translates to: QQTQNRKENLANVWPHRVDTEGR*GRVQAL
Trigger: CAGAGCCTGCACCCGCCCTCACCGTCCTTCTGTGTC...GACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CCA 90 bp CAGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCGGCTGCGCGCCAAGGTaGAAACCCTCAGGGTCCTGG +
Preference number: 2 (lower is better)
Translates to: QQTQNRKENLANVWPHRVGCAPR*KPSGSW
Trigger: CCAGGACCCTGAGGGTTTCCACCTTGGCGCGCAGCC...GACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR CCA 90 bp CAGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCTGGCCCCGCCCCTCTaGGCCCTTGGAATCATGGAG +
Preference number: 2 (lower is better)
Translates to: QQTQNRKENLANVWPHRVLAPPL*ALGIME
Trigger: CTCCATGATTCCAAGGGCCCAGAGGGGCGGGGCCAG...GACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR CCA 90 bp TACTTCCAGTCCTCCTTCACCGAGAAGTCTGTGTCTTCGGCCTTCAGGTGGTCTTGGTCTGCAATGTACTaGACGCCCTCCACCGCCCGG +
Preference number: 2 (lower is better)
Translates to: YFQSSFTEKSVSSAFRWSWSAMY*TPSTAR
Trigger: CCGGGCGGTGGAGGGCGTCCAGTACATTGCAGACCA...AGACCACCTGAAGGCCGAAGACACAGACTTCTCGGTGAAGGAGGACTGGAAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR GCA 90 bp ACTGGCCATCTTATGCATGGACTCGATGAGCCGCCGGCAATTGTCCTTGACCACTGGTCCACGCGGCTGTaGATGTTCACCAGGTCGATC +
Preference number: 2 (lower is better)
Translates to: TGHLMHGLDEPPAIVLDHWSTRL*MFTRSI
Trigger: GATCGACCTGGTGAACATGCACAGCCGCGTGGACCA...GTGGTCAAGGACAATTGCCGGCGGCTCATCGAGTCCATGCATAAGATGGCCAGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CCA 90 bp GAAGTCTGTGTCTTCGGCCTTCAGGTGGTCTGCAATGTACTGGACGCCCTCCACAGAAGCGCGGGGCACTaGCCATCTTATGCATGGACT +
Preference number: 2 (lower is better)
Translates to: EVCVFGLQVVCNVLDALHRSAGH*PSYAWT
Trigger: AGTCCATGCATAAGATGGCCAGTGCCCCGCGCTTCT...GTGGAGGGCGTCCAGTACATTGCAGACCACCTGAAGGCCGAAGACACAGACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR GCA 90 bp TACTTCCAGTCCTCCTTCACCGAGAAGTCTGTGTCTTCGGCCTTCAGGTGGTCTTGGTCCACGCGGCTGTaGATGTTCACCAGGTCGATC +
Preference number: 2 (lower is better)
Translates to: YFQSSFTEKSVSSAFRWSWSTRL*MFTRSI
Trigger: GATCGACCTGGTGAACATGCACAGCCGCGTGGACCA...AGACCACCTGAAGGCCGAAGACACAGACTTCTCGGTGAAGGAGGACTGGAAGTA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CCA 90 bp ACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCAGGGAACCAGGGCCCAGGTCTaGACTCCATTCGGGACCTTC +
Preference number: 2 (lower is better)
Translates to: TQNRKENLANVWPHRVQGTRAQV*TPFGTF
Trigger: GAAGGTCCCGAATGGAGTCCAGACCTGGGCCCTGGT...TCCCTGGACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR CCA 90 bp CGTACTTCCAGTCCTCCTTCACCGAGAAGTCTGTGTCTTCGGCCTTCAGGTGGTAGAAGCGCGGGGCACTaGCCATCTTATGCATGGACT +
Preference number: 2 (lower is better)
Translates to: RTSSPPSPRSLCLRPSGGRSAGH*PSYAWT
Trigger: AGTCCATGCATAAGATGGCCAGTGCCCCGCGCTTCT...ACCACCTGAAGGCCGAAGACACAGACTTCTCGGTGAAGGAGGACTGGAAGTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR GCA 90 bp AGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCGAACACAGTACTGGATaGTCCGAGACCGGCACCGGA +
Preference number: 2 (lower is better)
Translates to: SRHRTGRKIWQTCGPTESEHSTG*SETGTG
Trigger: TCCGGTGCCGGTCTCGGAGCATCCAGTACTGTGTTC...GGACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CCA 90 bp GGGGGTCACAGCCCTGGCAAGGTGGGTTCTAGGCAAGCTGTCCACCCCCGGGAAGTTAATTTGGCGTGGTaGGAATATGGTGCTTTATTT +
Preference number: 2 (lower is better)
Translates to: GGHSPGKVGSRQAVHPREVNLAW*EYGALF
Trigger: AAATAAAGCACCATATTCCCACCACGCCAAATTAAC...TTCCCGGGGGTGGACAGCTTGCCTAGAACCCACCTTGCCAGGGCTGTGACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR GCA 90 bp CGGCATTTCTGGGGCACTCGGCATGCCGGGTTCCTAACCTCAATTATTCATTCTGGAGTGAGTTCCATCTaGAGGGGAGCTCAGGAGACT +
Preference number: 2 (lower is better)
Translates to: RHFWGTRHAGFLTSIIHSGVSSI*RGAQET
Trigger: AGTCTCCTGAGCTCCCCTGCAGATGGAACTCACTCC...AGAATGAATAATTGAGGTTAGGAACCCGGCATGCCGAGTGCCCCAGAAATGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR GCA 90 bp CAGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCTCTTGCATGTGCATTTaGACGGAGAGGGCTGGTCTG +
Preference number: 2 (lower is better)
Translates to: QQTQNRKENLANVWPHRVSCMCI*TERAGL
Trigger: CAGACCAGCCCTCTCCGTGCAAATGCACATGCAAGA...GACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CCA 90 bp AGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCTCTTCGGCCTTCAGGTaGTCTGCAATGTACTGGACG +
Preference number: 2 (lower is better)
Translates to: SRHRTGRKIWQTCGPTESSSAFR*SAMYWT
Trigger: CGTCCAGTACATTGCAGACCACCTGAAGGCCGAAGA...GGACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CCA 90 bp ACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCAGGGAACAGGAAGGAAAATTTaGCAAACGTGTGGCCCCACA +
Preference number: 2 (lower is better)
Translates to: TQNRKENLANVWPHRVQGTGRKI*QTCGPT
Trigger: TGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGT...TCCCTGGACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000370263.9
ENST00000498043.6
ENST00000627000.1
3UTR GCA 72 bp CTGGACGCTGAGGGACCTGGCTTTGGCCAGCCCTGGTaGCTGGGTGCCGTGGGGCGGGCGGCAGGGTCCAGG +
Preference number: 3 (lower is better)
Translates to: LDAEGPGFGQPW*LGAVGRAAGSR
Trigger: CCTGGACCCTGCCGCCCGCCCCACGGCACCCAGGCACCAGGGCTGGCCAAAGCCAGGTCCCTCAGCGTCCAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR CCA 72 bp GCTCGGCGGGCCACACGGTCGGCGGGGCTTGGTCCATaGGGCTGGCCGGGCTTGCATCCCCAGGTGCTGTGT +
Preference number: 3 (lower is better)
Translates to: ARRATRSAGLGP*GWPGLHPQVLC
Trigger: ACACAGCACCTGGGGATGCAAGCCCGGCCAGCCCCATGGACCAAGCCCCGCCGACCGTGTGGCCCGCCGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR CCA 72 bp ACGGTGAGGGCGGGTGCAGGCTCTGGGTGCCGCTCGTaGCAGGGGGCTCCCCTTCTGGCTCGGGCCAGAAGC +
Preference number: 3 (lower is better)
Translates to: TVRAGAGSGCRS*QGAPLLARARS
Trigger: GCTTCTGGCCCGAGCCAGAAGGGGAGCCCCCTGCCACGAGCGGCACCCAGAGCCTGCACCCGCCCTCACCGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR CCA 72 bp GAGTGGGTGTTGCGAGAGGCCAGGGCGCCGGCAGCCTaGCCATCTGCCTCGGGGGCGGCATCGTCTCGGGGA +
Preference number: 3 (lower is better)
Translates to: EWVLREARAPAA*PSASGAASSRG
Trigger: TCCCCGAGACGATGCCGCCCCCGAGGCAGATGGCCAGGCTGCCGGCGCCCTGGCCTCTCGCAACACCCACTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CAA 90 bp GGGCGGGTGCAGGCTCTGGGTGCCGCTCGTGGCAGGGGGCTCCCCTTCTGGCTCCGCCGGCAATTGTCCTaGACCACGGACGGCCGCTTC +
Preference number: 3 (lower is better)
Translates to: GRVQALGAARGRGLPFWLRRQLS*TTDGRF
Trigger: GAAGCGGCCGTCCGTGGTCAAGGACAATTGCCGGCG...GAGCCAGAAGGGGAGCCCCCTGCCACGAGCGGCACCCAGAGCCTGCACCCGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CAA 90 bp GTCTGCAATGTACTGGACGCCCTCCACCGCCCGGGTCAGGGCCGGCGACAGGGGTGCGGGGGCGGCGCTTaGGTGCTGCGGGTCTTGACC +
Preference number: 3 (lower is better)
Translates to: VCNVLDALHRPGQGRRQGCGGGA*VLRVLT
Trigger: GGTCAAGACCCGCAGCACCAAAGCGCCGCCCCCGCA...CCCCTGTCGCCGGCCCTGACCCGGGCGGTGGAGGGCGTCCAGTACATTGCAGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR TCA 72 bp GCAGGTGCGGGGGCGGCGCTTTGGTGCTGCGGGTCTTaGCCGTGGCGCTCGGGGACACCGAAGAGGGCTCCT +
Preference number: 3 (lower is better)
Translates to: AGAGAALWCCGS*PWRSGTPKRAP
Trigger: AGGAGCCCTCTTCGGTGTCCCCGAGCGCCACGGTCAAGACCCGCAGCACCAAAGCGCCGCCCCCGCACCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR CCA 72 bp GGGACACAGAAGGACGGTGAGGGCGGGTGCAGGCTCTaGGTGCCGCTCGTGGCAGGGGGCTCCCCTTCTGGC +
Preference number: 3 (lower is better)
Translates to: GTQKDGEGGCRL*VPLVAGGSPSG
Trigger: GCCAGAAGGGGAGCCCCCTGCCACGAGCGGCACCCAGAGCCTGCACCCGCCCTCACCGTCCTTCTGTGTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR TCA 72 bp CTCAGCCGGCACATCCAGGGGGACACAGAAGGACGGTaGGGGCGGGTGCAGGCTCTGGGTGCCGCTCGTGGC +
Preference number: 3 (lower is better)
Translates to: LSRHIQGDTEGR*GRVQALGAARG
Trigger: GCCACGAGCGGCACCCAGAGCCTGCACCCGCCCTCACCGTCCTTCTGTGTCCCCCTGGATGTGCCGGCTGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR GCA 72 bp CGGGGGCGGCATCGTCTCGGGGAACACAGTACTGGATaGTCCGAGACCGGCACCGGACGCCGCCTTCCACCG +
Preference number: 3 (lower is better)
Translates to: RGRHRLGEHSTG*SETGTGRRLPP
Trigger: CGGTGGAAGGCGGCGTCCGGTGCCGGTCTCGGAGCATCCAGTACTGTGTTCCCCGAGACGATGCCGCCCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR GCA 72 bp GTTGCGAGAGGCCAGGGCGCCGGCAGCCTGGCCATCTaGCTCGGGGGCGGCATCGTCTCGGGGAACACAGTA +
Preference number: 3 (lower is better)
Translates to: VARGQGAGSLAI*LGGGIVSGNTV
Trigger: TACTGTGTTCCCCGAGACGATGCCGCCCCCGAGGCAGATGGCCAGGCTGCCGGCGCCCTGGCCTCTCGCAAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR CCA 72 bp GCCTCGGGGGCGGCATCGTCTCGGGGAACACAGTACTaGATGCTCCGAGACCGGCACCGGACGCCGCCTTCC +
Preference number: 3 (lower is better)
Translates to: ASGAASSRGTQY*MLRDRHRTPPS
Trigger: GGAAGGCGGCGTCCGGTGCCGGTCTCGGAGCATCCAGTACTGTGTTCCCCGAGACGATGCCGCCCCCGAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CAA 90 bp GGTCTGGGGGTGGGAGCTCAGCCGAGTGGGTGTTGCGAGAGGCCAGGGCGCCGGATGAGCCGCCGGCAATaGTCCTTGACCACGGACGGC +
Preference number: 3 (lower is better)
Translates to: GLGVGAQPSGCCERPGRRMSRRQ*SLTTDG
Trigger: GCCGTCCGTGGTCAAGGACAATTGCCGGCGGCTCAT...CCGGCGCCCTGGCCTCTCGCAACACCCACTCGGCTGAGCTCCCACCCCCAGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR CCA 72 bp ACGCCTGGAAGGCAGAGTCCTGGTCTCCAGACTCGCTaGGGCTGGGTGTTCCTGTCCCCCGCGGAGGGCCTG +
Preference number: 3 (lower is better)
Translates to: TPGRQSPGLQTR*GWVFLSPAEGL
Trigger: CAGGCCCTCCGCGGGGGACAGGAACACCCAGCCCCAGCGAGTCTGGAGACCAGGACTCTGCCTTCCAGGCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR GCA 72 bp ACGCCGCCTTCCACCGCTTCGCCAGGGCTGGACATGTaGTGGACGCTGAGGGACCTGGCTTTGGCCAGCCCT +
Preference number: 3 (lower is better)
Translates to: TPPSTASPGLDM*WTLRDLALASP
Trigger: AGGGCTGGCCAAAGCCAGGTCCCTCAGCGTCCAGCACATGTCCAGCCCTGGCGAAGCGGTGGAAGGCGGCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CAA 90 bp ATTTGGCAAACGTGTGGCCCCACAGAGTCCAGGGAGAAGCCAGCCCGGCCCCAGCTGAGGGACCTGGCTTaGGCCAGCCCTGGTGCCTGG +
Preference number: 3 (lower is better)
Translates to: IWQTCGPTESREKPARPQLRDLA*ASPGAW
Trigger: CCAGGCACCAGGGCTGGCCAAAGCCAGGTCCCTCAG...CTGGGGCCGGGCTGGCTTCTCCCTGGACTCTGTGGGGCCACACGTTTGCCAAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR TCA 72 bp GACCAGTGTCTCCTGCCAGCTTCCATGGCCCCGGGATaGCCTCACTCTCCCAGGGTCTCCCTGCGTCCTGGG +
Preference number: 3 (lower is better)
Translates to: DQCLLPASMAPG*PHSPRVSLRPG
Trigger: CCCAGGACGCAGGGAGACCCTGGGAGAGTGAGGTCATCCCGGGGCCATGGAAGCTGGCAGGAGACACTGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR GCA 72 bp ACACACTGGGAGCACATTCCAGGGCTTGGCAGACATTaGCTGCAGAAGCCGGGCGGCCGCACCTGGGCTCGG +
Preference number: 3 (lower is better)
Translates to: THWEHIPGLGRH*LQKPGGRTWAR
Trigger: CCGAGCCCAGGTGCGGCCGCCCGGCTTCTGCAGGCAATGTCTGCCAAGCCCTGGAATGTGCTCCCAGTGTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR CCA 72 bp TGCCTGCCCTGCCAGGACGGAGGGCATGGGCCTGTGTaGAAACCCCAGGGCTCCCTGACTCCCATGAGGCTT +
Preference number: 3 (lower is better)
Translates to: CLPCQDGGHGPV*KPQGSLTPMRL
Trigger: AAGCCTCATGGGAGTCAGGGAGCCCTGGGGTTTCCACACAGGCCCATGCCCTCCGTCCTGGCAGGGCAGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR CCA 72 bp TCTGTGTCTTCGGCCTTCAGGTGGTCTGCAATGTACTaGACGCCCTCCACCGCCCGGGTCAGGGCCGGCGAC +
Preference number: 3 (lower is better)
Translates to: SVSSAFRWSAMY*TPSTARVRAGD
Trigger: GTCGCCGGCCCTGACCCGGGCGGTGGAGGGCGTCCAGTACATTGCAGACCACCTGAAGGCCGAAGACACAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CAA 90 bp ATTTGGCAAACGTGTGGCCCCACAGAGTCCAGGGAGAAGCCAGCCCGGCCCCAGTGGAACAGGTGGGCCTaGGTCAGGTGGGTGACCGCG +
Preference number: 3 (lower is better)
Translates to: IWQTCGPTESREKPARPQWNRWA*VRWVTA
Trigger: CGCGGTCACCCACCTGACCAAGGCCCACCTGTTCCA...CTGGGGCCGGGCTGGCTTCTCCCTGGACTCTGTGGGGCCACACGTTTGCCAAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CAA 90 bp CTGGACATGTGCTGGACGCTGAGGGACCTGGCTTTGGCCAGCCCTGGTGCCTGGATGAGCCGCCGGCAATaGTCCTTGACCACGGACGGC +
Preference number: 3 (lower is better)
Translates to: LDMCWTLRDLALASPGAWMSRRQ*SLTTDG
Trigger: GCCGTCCGTGGTCAAGGACAATTGCCGGCGGCTCAT...CCAGGCACCAGGGCTGGCCAAAGCCAGGTCCCTCAGCGTCCAGCACATGTCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR CCA 72 bp AGCGAAGCAGATTGGAGCGCTGCTGGCTCACCCTCATaGGGCCCGAGAGGCTCAAGGACCCTGGGGGAGAAG +
Preference number: 3 (lower is better)
Translates to: SEADWSAAGSPS*GPRGSRTLGEK
Trigger: CTTCTCCCCCAGGGTCCTTGAGCCTCTCGGGCCCCATGAGGGTGAGCCAGCAGCGCTCCAATCTGCTTCGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR CCA 72 bp GCAGTCACTCCTGACCCAGAAAAGAACAACCACAGCTaGGCCCAGCACCCCGGGCCACTCCCTGCAGCTGCC +
Preference number: 3 (lower is better)
Translates to: AVTPDPEKNNHS*AQHPGPLPAAA
Trigger: GGCAGCTGCAGGGAGTGGCCCGGGGTGCTGGGCCCAGCTGTGGTTGTTCTTTTCTGGGTCAGGAGTGACTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR TCA 72 bp GCCCCTTGGGGCGGTCGGGACCATCACCAGATCTGCTaGGAGACTGGGAGGAGTGAGTTCCATCTGCAGGGG +
Preference number: 3 (lower is better)
Translates to: APWGGRDHHQIC*ETGRSEFHLQG
Trigger: CCCCTGCAGATGGAACTCACTCCTCCCAGTCTCTCAGCAGATCTGGTGATGGTCCCGACCGCCCCAAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR TCA 72 bp CCGGCAGGAGCGTCCCAGCCACTCCGCAGTCACTCCTaGCCCAGAAAAGAACAACCACAGCTGGGCCCAGCA +
Preference number: 3 (lower is better)
Translates to: PAGASQPLRSHS*PRKEQPQLGPA
Trigger: TGCTGGGCCCAGCTGTGGTTGTTCTTTTCTGGGTCAGGAGTGACTGCGGAGTGGCTGGGACGCTCCTGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR GCA 72 bp GGCTCGGGCCAGAAGCGCGGGGCACTGGCCATCTTATaGATGGACTCGATGAGCCGCCGGCAATTGTCCTTG +
Preference number: 3 (lower is better)
Translates to: GSGQKRGALAIL*MDSMSRRQLSL
Trigger: CAAGGACAATTGCCGGCGGCTCATCGAGTCCATGCATAAGATGGCCAGTGCCCCGCGCTTCTGGCCCGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR CCA 72 bp CAATCCCTGCCTGGACCCTCTCCTAGCGAAGCAGATTaGAGCGCTGCTGGCTCACCCTCATGGGGCCCGAGA +
Preference number: 3 (lower is better)
Translates to: QSLPGPSPSEAD*SAAGSPSWGPR
Trigger: TCTCGGGCCCCATGAGGGTGAGCCAGCAGCGCTCCAATCTGCTTCGCTAGGAGAGGGTCCAGGCAGGGATTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR GCA 72 bp CACCGAGAAGTCTGTGTCTTCGGCCTTCAGGTGGTCTaGAATGTACTGGACGCCCTCCACCGCCCGGGTCAG +
Preference number: 3 (lower is better)
Translates to: HREVCVFGLQVV*NVLDALHRPGQ
Trigger: CTGACCCGGGCGGTGGAGGGCGTCCAGTACATTGCAGACCACCTGAAGGCCGAAGACACAGACTTCTCGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR CCA 72 bp GAGGTCAATCCACGGTGCTTAAGTCAGAGCCACAGATaGGGAGGGACGCCGACAGGAAGGGCTGGAGGGACC +
Preference number: 3 (lower is better)
Translates to: EVNPRCLSQSHR*GGTPTGRAGGT
Trigger: GGTCCCTCCAGCCCTTCCTGTCGGCGTCCCTCCCCATCTGTGGCTCTGACTTAAGCACCGTGGATTGACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR CCA 72 bp TTCGAGCTGCAGCAGTGTCTCCCGCTGCCTGGTGCCTaGCACAGGGCGGGGAAACGTTGGCTTAGTGTGAGA +
Preference number: 3 (lower is better)
Translates to: FELQQCLPLPGA*HRAGKRWLSVR
Trigger: TCTCACACTAAGCCAACGTTTCCCCGCCCTGTGCCAGGCACCAGGCAGCGGGAGACACTGCTGCAGCTCGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR CCA 72 bp AAGTCTGTGCACACACTGGGAGCACATTCCAGGGCTTaGCAGACATTGCCTGCAGAAGCCGGGCGGCCGCAC +
Preference number: 3 (lower is better)
Translates to: KSVHTLGAHSRA*QTLPAEAGRPH
Trigger: GTGCGGCCGCCCGGCTTCTGCAGGCAATGTCTGCCAAGCCCTGGAATGTGCTCCCAGTGTGTGCACAGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR CAA 90 bp CTTCCAGTCCTCCTTCACCGAGAAGTCTGTGTCTTCGGCCTTCAGGTGGTCTGCCGCCGGCAATTGTCCTaGACCACGGACGGCCGCTTC +
Preference number: 3 (lower is better)
Translates to: LPVLLHREVCVFGLQVVCRRQLS*TTDGRF
Trigger: GAAGCGGCCGTCCGTGGTCAAGGACAATTGCCGGCG...GCAGACCACCTGAAGGCCGAAGACACAGACTTCTCGGTGAAGGAGGACTGGAAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR CCA 72 bp TCCTTCACCGAGAAGTCTGTGTCTTCGGCCTTCAGGTaGTCTGCAATGTACTGGACGCCCTCCACCGCCCGG +
Preference number: 3 (lower is better)
Translates to: SFTEKSVSSAFR*SAMYWTPSTAR
Trigger: CCGGGCGGTGGAGGGCGTCCAGTACATTGCAGACCACCTGAAGGCCGAAGACACAGACTTCTCGGTGAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CAA 90 bp GAGCACATTCCAGGGCTTGGCAGACATTGCCTGCAGAAGCCGGGCGGCCGCACCAACAGGAAGGAAAATTaGGCAAACGTGTGGCCCCAC +
Preference number: 3 (lower is better)
Translates to: EHIPGLGRHCLQKPGGRTNRKEN*ANVWPH
Trigger: GTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTT...GGTGCGGCCGCCCGGCTTCTGCAGGCAATGTCTGCCAAGCCCTGGAATGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR CAA 90 bp CTGGACATGTGCTGGACGCTGAGGGACCTGGCTTTGGCCAGCCCTGGTGCCTGGAACAGGAAGGAAAATTaGGCAAACGTGTGGCCCCAC +
Preference number: 3 (lower is better)
Translates to: LDMCWTLRDLALASPGAWNRKEN*ANVWPH
Trigger: GTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTT...CCAGGCACCAGGGCTGGCCAAAGCCAGGTCCCTCAGCGTCCAGCACATGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CAA 90 bp AGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCTGCGGGGGCGGCGCTTaGGTGCTGCGGGTCTTGACC +
Preference number: 3 (lower is better)
Translates to: SRHRTGRKIWQTCGPTESCGGGA*VLRVLT
Trigger: GGTCAAGACCCGCAGCACCAAAGCGCCGCCCCCGCA...GGACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CAA 90 bp CAGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCCCTTCAAGGGCCCCTaGGGGCGGTCGGGACCATCA +
Preference number: 3 (lower is better)
Translates to: QQTQNRKENLANVWPHRVPFKGP*GRSGPS
Trigger: TGATGGTCCCGACCGCCCCAAGGGGCCCTTGAAGGG...GACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR TCA 72 bp GGACCATCACCAGATCTGCTGAGAGACTGGGAGGAGTaGGTTCCATCTGCAGGGGAGCTCAGGAGACTCTTG +
Preference number: 3 (lower is better)
Translates to: GPSPDLLRDWEE*VPSAGELRRLL
Trigger: CAAGAGTCTCCTGAGCTCCCCTGCAGATGGAACTCACTCCTCCCAGTCTCTCAGCAGATCTGGTGATGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR GCA 72 bp CGCGGGGACACAGCGGCATTTCTGGGGCACTCGGCATaGCGGGTTCCTAACCTCAATTATTCATTCTGCTCT +
Preference number: 3 (lower is better)
Translates to: RGDTAAFLGHSA*RVPNLNYSFCS
Trigger: AGAGCAGAATGAATAATTGAGGTTAGGAACCCGGCATGCCGAGTGCCCCAGAAATGCCGCTGTGTCCCCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR TCA 72 bp AGTGAGTTCCATCTGCAGGGGAGCTCAGGAGACTCTTaGACTGGACTTAGCCCGAGTCCTGCAGGTAGAAGG +
Preference number: 3 (lower is better)
Translates to: SEFHLQGSSGDS*TGLSPSPAGRR
Trigger: CCTTCTACCTGCAGGACTCGGGCTAAGTCCAGTTCAAGAGTCTCCTGAGCTCCCCTGCAGATGGAACTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR GCA 72 bp AGATCTGCTGAGAGACTGGGAGGAGTGAGTTCCATCTaGAGGGGAGCTCAGGAGACTCTTGAACTGGACTTA +
Preference number: 3 (lower is better)
Translates to: RSAERLGGVSSI*RGAQETLELDL
Trigger: TAAGTCCAGTTCAAGAGTCTCCTGAGCTCCCCTGCAGATGGAACTCACTCCTCCCAGTCTCTCAGCAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR-3UTR CAA 90 bp CAGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCGAAGAGGGCTCCTTCTaGCATGTGCATTTGCACGGA +
Preference number: 3 (lower is better)
Translates to: QQTQNRKENLANVWPHRVEEGSF*HVHLHG
Trigger: TCCGTGCAAATGCACATGCAAGAAGGAGCCCTCTTC...GACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR-3UTR CAA 90 bp CAGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCAACAGGAAGGAAAATTaGGCAAACGTGTGGCCCCAC +
Preference number: 3 (lower is better)
Translates to: QQTQNRKENLANVWPHRVNRKEN*ANVWPH
Trigger: GTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTT...GACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000370263.9
ENST00000498043.6
ENST00000627000.1
3UTR GCA 72 bp CACACACCGGCACCTCCATTCCTAATCACCGACAGCTaGAAGCAAAGTCCACTAACAGGTGATGGACAAACT +
Preference number: 3 (lower is better)
Translates to: HTPAPPFLITDS*KQSPLTGDGQT
Trigger: AGTTTGTCCATCACCTGTTAGTGGACTTTGCTTGCAGCTGTCGGTGATTAGGAATGGAGGTGCCGGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR CCA 72 bp CCCACACATCTGGCAGCTGGGTCCACTTATGCAATGTaGATCGGGCTTCTTACATCTGAAATCTGCGTCTCT +
Preference number: 3 (lower is better)
Translates to: PTHLAAGSTYAM*IGLLTSEICVS
Trigger: AGAGACGCAGATTTCAGATGTAAGAAGCCCGATCCACATTGCATAAGTGGACCCAGCTGCCAGATGTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR CCA 72 bp CAGGTGCTGTGTGTGCTGCGCCTGATCCAGCATTTCTaGTGCAAGGTGAAAGGACTCAGCCACTTTAGAAAT +
Preference number: 3 (lower is better)
Translates to: QVLCVLRLIQHF*CKVKGLSHFRN
Trigger: ATTTCTAAAGTGGCTGAGTCCTTTCACCTTGCACCAGAAATGCTGGATCAGGCGCAGCACACACAGCACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR TCA 72 bp GTCCACTTATGCAATGTGGATCGGGCTTCTTACATCTaGAATCTGCGTCTCTATCCCTCCTCTGAGACCAGT +
Preference number: 3 (lower is better)
Translates to: VHLCNVDRASYI*NLRLYPSSETS
Trigger: ACTGGTCTCAGAGGAGGGATAGAGACGCAGATTTCAGATGTAAGAAGCCCGATCCACATTGCATAAGTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR TCA 72 bp AAACTCTGTTCTCCAAGGCTCCTTAGGCACAAGACTTaGGTTCTCACTAACTTACCCAAAACACAACCAAAC +
Preference number: 3 (lower is better)
Translates to: KLCSPRLLRHKT*VLTNLPKTQPN
Trigger: GTTTGGTTGTGTTTTGGGTAAGTTAGTGAGAACTCAAGTCTTGTGCCTAAGGAGCCTTGGAGAACAGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp GGAGAAGCCAGCCCGGCCCCAGGCCGGCCGCATGGATGCTGGCCCCGTGCACGGGGCGGGTGCAGGCTCTaGGTGCCGCTCGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GEASPAPGRPHGCWPRARGGCRL*VPLVAG
Trigger: CCCTGCCACGAGCGGCACCCAGAGCCTGCACCCGCC...CCGTGCACGGGGCCAGCATCCATGCGGCCGGCCTGGGGCCGGGCTGGCTTCTCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370263.9
ENST00000498043.6
ENST00000627000.1
CDS-3UTR GCA 90 bp GGAGAAGCCAGCCCGGCCCCAGGCCGGCCGCATGGATGCTGGCCCCGTGCACGGGGCAGCCTGGCCATCTaGCTCGGGGGCGGCATCGTC +
Preference number: 4 (lower is better)
Translates to: GEASPAPGRPHGCWPRARGSLAI*LGGGIV
Trigger: GACGATGCCGCCCCCGAGGCAGATGGCCAGGCTGCC...CCGTGCACGGGGCCAGCATCCATGCGGCCGGCCTGGGGCCGGGCTGGCTTCTCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000370263.9
ENST00000498043.6
ENST00000627000.1
CDS-3UTR GCA 90 bp GGAGAAGCCAGCCCGGCCCCAGGCCGGCCGCATGGATGCTGGCCCCGTGCACGGCCCCACTCACGTCACTaGCCGCGGGGACACAGCGGC +
Preference number: 4 (lower is better)
Translates to: GEASPAPGRPHGCWPRARPHSRH*PRGHSG
Trigger: GCCGCTGTGTCCCCGCGGGCAGTGACGTGAGTGGGG...CCGTGCACGGGGCCAGCATCCATGCGGCCGGCCTGGGGCCGGGCTGGCTTCTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp TGGGTGCCGCTCGTGGCAGGGGGCTCCCCTTCTGGCTCGGGCCAGAAGCGCGGGCGGCCGCATGGATGCTaGCCCCGTGCACGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: WVPLVAGGSPSGSGQKRGRPHGC*PRARQP
Trigger: GGGCTGCCGTGCACGGGGCCAGCATCCATGCGGCCG...CCCGCGCTTCTGGCCCGAGCCAGAAGGGGAGCCCCCTGCCACGAGCGGCACCCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR TCA 90 bp GGGAGAAGCCAGCCCGGCCCCAGGCCGGCCGCATGGATGCTGGCCCCGTGCACGGCTTCCAGGGGCTGCTaGGGAGGGAGCTGGTCGGAG +
Preference number: 4 (lower is better)
Translates to: GRSQPGPRPAAWMLAPCTASRGC*GGSWSE
Trigger: CTCCGACCAGCTCCCTCCTCAGCAGCCCCTGGAAGC...CGTGCACGGGGCCAGCATCCATGCGGCCGGCCTGGGGCCGGGCTGGCTTCTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370263.9
ENST00000498043.6
ENST00000627000.1
CDS-3UTR GCA 90 bp ACGGTGAGGGCGGGTGCAGGCTCTGGGTGCCGCTCGTGGCAGGGGGCTCCCCTTGGCCGGCCGCATGGATaGTGGCCCCGTGCACGGCAG +
Preference number: 4 (lower is better)
Translates to: TVRAGAGSGCRSWQGAPLGRPHG*WPRARQ
Trigger: CTGCCGTGCACGGGGCCAGCATCCATGCGGCCGGCC...AAGGGGAGCCCCCTGCCACGAGCGGCACCCAGAGCCTGCACCCGCCCTCACCGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp TGGGGGTGGGAGCTCAGCCGAGTGGGTGTTGCGAGAGGCCAGGGCGCCGGCAGCGGCGGGTGCAGGCTCTaGGTGCCGCTCGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: WGWELSRVGVARGQGAGSGGCRL*VPLVAG
Trigger: CCCTGCCACGAGCGGCACCCAGAGCCTGCACCCGCC...GCTGCCGGCGCCCTGGCCTCTCGCAACACCCACTCGGCTGAGCTCCCACCCCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp GGGCCACGTCGCCCCAGGCCGGGCCACACGGGAAGCACCCAGGCCGGTCCGGAGGCGAGGGGTGGGGGCTaGCTTTCTCAGCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GPRRPRPGHTGSTQAGPEARGGG*LSQLPG
Trigger: CCCTGGAAGCTGAGAAAGCCAGCCCCCACCCCTCGC...CTCCGGACCGGCCTGGGTGCTTCCCGTGTGGCCCGGCCTGGGGCGACGTGGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR CAA 72 bp GGCAGGTGCGGGGGCGGCGCTTTGGTGCTGCGGGTCTaGACCGTGGCGCTCGGGGACACCGAAGAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GRCGGGALVLRV*TVALGDTEEGS
Trigger: GGAGCCCTCTTCGGTGTCCCCGAGCGCCACGGTCAAGACCCGCAGCACCAAAGCGCCGCCCCCGCACCTGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR GCA 90 bp TGCAGGCTCTGGGTGCCGCTCGTGGCAGGGGGCTCCCCTTCTGGCTCGGGCCAGGACGGTGAGGGCGGGTaGAGGCTCTGGGTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: CRLWVPLVAGGSPSGSGQDGEGG*RLWVPL
Trigger: GAGCGGCACCCAGAGCCTGCACCCGCCCTCACCGTC...CTGGCCCGAGCCAGAAGGGGAGCCCCCTGCCACGAGCGGCACCCAGAGCCTGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR GCA 90 bp ACGGTGAGGGCGGGTGCAGGCTCTGGGTGCCGCTCGTGGCAGGGGGCTCCCCTTGACGGTGAGGGCGGGTaGAGGCTCTGGGTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: TVRAGAGSGCRSWQGAPLDGEGG*RLWVPL
Trigger: GAGCGGCACCCAGAGCCTGCACCCGCCCTCACCGTC...AAGGGGAGCCCCCTGCCACGAGCGGCACCCAGAGCCTGCACCCGCCCTCACCGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR GCA 90 bp GGATGCTCCGAGACCGGCACCGGACGCCGCCTTCCACCGCTTCGCCAGGGCTGGTTTGGCCAGCCCTGGTaGCTGGGTGCCGTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: GCSETGTGRRLPPLRQGWFGQPW*LGAVGR
Trigger: CCGCCCCACGGCACCCAGGCACCAGGGCTGGCCAAA...CCAGCCCTGGCGAAGCGGTGGAAGGCGGCGTCCGGTGCCGGTCTCGGAGCATCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR GCA 90 bp TGGGGGTGGGAGCTCAGCCGAGTGGGTGTTGCGAGAGGCCAGGGCGCCGGCAGCGGCAGCCTGGCCATCTaGCTCGGGGGCGGCATCGTC +
Preference number: 4 (lower is better)
Translates to: WGWELSRVGVARGQGAGSGSLAI*LGGGIV
Trigger: GACGATGCCGCCCCCGAGGCAGATGGCCAGGCTGCC...GCTGCCGGCGCCCTGGCCTCTCGCAACACCCACTCGGCTGAGCTCCCACCCCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp TGGATGCTCCGAGACCGGCACCGGACGCCGCCTTCCACCGCTTCGCCAGGGCTGGGCCCCCTAGCTCCATaGCGCACGCACCTCGCGGGC +
Preference number: 4 (lower is better)
Translates to: WMLRDRHRTPPSTASPGLGPLAP*RTHLAG
Trigger: GCCCGCGAGGTGCGTGCGCCATGGAGCTAGGGGGCC...CAGCCCTGGCGAAGCGGTGGAAGGCGGCGTCCGGTGCCGGTCTCGGAGCATCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627000.1
CDS-3UTR CCA 90 bp TACTGGACGCCCTCCACCGCCCGGGTCAGGGCCGGCGACAGGGGCAGGTGCGGGGTACCCAGGTGGGCATaGTGTGCGTGCGTGGCGAGC +
Preference number: 4 (lower is better)
Translates to: YWTPSTARVRAGDRGRCGVPRWA*CACVAS
Trigger: GCTCGCCACGCACGCACACCATGCCCACCTGGGTAC...CCCGCACCTGCCCCTGTCGCCGGCCCTGACCCGGGCGGTGGAGGGCGTCCAGTA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp GGGCCACGTCGCCCCAGGCCGGGCCACACGGGAAGCACCCAGGCCGGTCCGGAGGGTCTCCAGACTCGCTaGGGCTGGGTGTTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: GPRRPRPGHTGSTQAGPEGLQTR*GWVFLS
Trigger: GGACAGGAACACCCAGCCCCAGCGAGTCTGGAGACC...CTCCGGACCGGCCTGGGTGCTTCCCGTGTGGCCCGGCCTGGGGCGACGTGGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp GGATGCTCCGAGACCGGCACCGGACGCCGCCTTCCACCGCTTCGCCAGGGCTGGTGTCCGGCCGCCAGATaGGCTCGGAGGGGATGCGGA +
Preference number: 4 (lower is better)
Translates to: GCSETGTGRRLPPLRQGWCPAAR*ARRGCG
Trigger: TCCGCATCCCCTCCGAGCTCATCTGGCGGCCGGACA...CCAGCCCTGGCGAAGCGGTGGAAGGCGGCGTCCGGTGCCGGTCTCGGAGCATCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR GCA 90 bp CAGGTGGTCTGCAATGTACTGGACGCCCTCCACCGCCCGGGTCAGGGCCGGCGAGCGCGCCCAACTTCATaGCTCCCGCGCCTCGCGGGC +
Preference number: 4 (lower is better)
Translates to: QVVCNVLDALHRPGQGRRARPTS*LPRLAG
Trigger: GCCCGCGAGGCGCGGGAGGCATGAAGTTGGGCGCGC...TCGCCGGCCCTGACCCGGGCGGTGGAGGGCGTCCAGTACATTGCAGACCACCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627000.1
CDS-3UTR GCA 90 bp GGGTGGGAGCTCAGCCGAGTGGGTGTTGCGAGAGGCCAGGGCGCCGGCAGCCTGGCCGGGGGAGTCCACTaGACCCGCCCGTCATGGAAC +
Preference number: 4 (lower is better)
Translates to: GWELSRVGVARGQGAGSLAGGVH*TRPSWN
Trigger: GTTCCATGACGGGCGGGTGCAGTGGACTCCCCCGGC...CAGGCTGCCGGCGCCCTGGCCTCTCGCAACACCCACTCGGCTGAGCTCCCACCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp GGGCGGGTGCAGGCTCTGGGTGCCGCTCGTGGCAGGGGGCTCCCCTTCTGGCTCCCCTGCGTACCCAGGTaGGCATGGTGTGCGTGCGTG +
Preference number: 4 (lower is better)
Translates to: GRVQALGAARGRGLPFWLPCVPR*AWCACV
Trigger: CACGCACGCACACCATGCCCACCTGGGTACGCAGGG...GAGCCAGAAGGGGAGCCCCCTGCCACGAGCGGCACCCAGAGCCTGCACCCGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp TGGATGCTCCGAGACCGGCACCGGACGCCGCCTTCCACCGCTTCGCCAGGGCTGAGGGGGCTCCCCTTCTaGCTCGGGCCAGAAGCGCGG +
Preference number: 4 (lower is better)
Translates to: WMLRDRHRTPPSTASPGLRGLPF*LGPEAR
Trigger: CCGCGCTTCTGGCCCGAGCCAGAAGGGGAGCCCCCT...CAGCCCTGGCGAAGCGGTGGAAGGCGGCGTCCGGTGCCGGTCTCGGAGCATCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
3UTR CAA 72 bp GGCTGGTCTGGGGGTGGGAGCTCAGCCGAGTGGGTGTaGCGAGAGGCCAGGGCGCCGGCAGCCTGGCCATCT +
Preference number: 4 (lower is better)
Translates to: GWSGGGSSAEWV*REARAPAAWPS
Trigger: AGATGGCCAGGCTGCCGGCGCCCTGGCCTCTCGCAACACCCACTCGGCTGAGCTCCCACCCCCAGACCAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR TCA 90 bp ACCACGCTTCCTGAGAGGAGGGCCACGTCGCCCCAGGCCGGGCCACACGGGAAGCGGACGGCCGCTTCATaGGGAGCAGGCGTGGCACGA +
Preference number: 4 (lower is better)
Translates to: TTLPERRATSPQAGPHGKRTAAS*GAGVAR
Trigger: TCGTGCCACGCCTGCTCCTCATGAAGCGGCCGTCCG...CTTCCCGTGTGGCCCGGCCTGGGGCGACGTGGCCCTCCTCTCAGGAAGCGTGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp GGGCCACGTCGCCCCAGGCCGGGCCACACGGGAAGCACCCAGGCCGGTCCGGAGAGAGACTGGGAGGAGTaGGTTCCATCTGCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: GPRRPRPGHTGSTQAGPERDWEE*VPSAGE
Trigger: CTCCCCTGCAGATGGAACTCACTCCTCCCAGTCTCT...CTCCGGACCGGCCTGGGTGCTTCCCGTGTGGCCCGGCCTGGGGCGACGTGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp TGCCAGGACGGAGGGCATGGGCCTGTGTGGAAACCCCAGGGCTCCCTGACTCCCGCGCGCCCAACTTCATaGCTCCCGCGCCTCGCGGGC +
Preference number: 4 (lower is better)
Translates to: CQDGGHGPVWKPQGSLTPARPTS*LPRLAG
Trigger: GCCCGCGAGGCGCGGGAGGCATGAAGTTGGGCGCGC...GGGAGTCAGGGAGCCCTGGGGTTTCCACACAGGCCCATGCCCTCCGTCCTGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp TGGGGGTGGGAGCTCAGCCGAGTGGGTGTTGCGAGAGGCCAGGGCGCCGGCAGCCCGCTTCGAGGCCCGTaGGCGCCCAACTTCATGCCT +
Preference number: 4 (lower is better)
Translates to: WGWELSRVGVARGQGAGSPLRGP*APNFMP
Trigger: AGGCATGAAGTTGGGCGCGCACGGGCCTCGAAGCGG...GCTGCCGGCGCCCTGGCCTCTCGCAACACCCACTCGGCTGAGCTCCCACCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627000.1
CDS-3UTR GCA 90 bp CCGGCAGGAGGGTCCCCCGGCAGGAGCGTCCCAGCCACTCCGCAGTCACTCCTGGGCTGTGCTGAGCTCTaGCTGCCCTGCCAGGACGGA +
Preference number: 4 (lower is better)
Translates to: PAGGSPGRSVPATPQSLLGCAEL*LPCQDG
Trigger: TCCGTCCTGGCAGGGCAGGCAGAGCTCAGCACAGCC...CAGGAGTGACTGCGGAGTGGCTGGGACGCTCCTGCCGGGGGACCCTCCTGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp GGGCGGGTGCAGGCTCTGGGTGCCGCTCGTGGCAGGGGGCTCCCCTTCTGGCTCTGCACCCGCCCGTCATaGAACAGGTGGGCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: GRVQALGAARGRGLPFWLCTRPS*NRWALV
Trigger: GACCAAGGCCCACCTGTTCCATGACGGGCGGGTGCA...GAGCCAGAAGGGGAGCCCCCTGCCACGAGCGGCACCCAGAGCCTGCACCCGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp TGCAGGCTCTGGGTGCCGCTCGTGGCAGGGGGCTCCCCTTCTGGCTCGGGCCAGGTACCCAGGTGGGCATaGTGTGCGTGCGTGGCGAGC +
Preference number: 4 (lower is better)
Translates to: CRLWVPLVAGGSPSGSGQVPRWA*CACVAS
Trigger: GCTCGCCACGCACGCACACCATGCCCACCTGGGTAC...CTGGCCCGAGCCAGAAGGGGAGCCCCCTGCCACGAGCGGCACCCAGAGCCTGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp GGGCCACGTCGCCCCAGGCCGGGCCACACGGGAAGCACCCAGGCCGGTCCGGAGCATGAGGAGCAGGCGTaGCACGATGTCCAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: GPRRPRPGHTGSTQAGPEHEEQA*HDVQED
Trigger: GTCTTCCTGGACATCGTGCCACGCCTGCTCCTCATG...CTCCGGACCGGCCTGGGTGCTTCCCGTGTGGCCCGGCCTGGGGCGACGTGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp TGCAGGCTCTGGGTGCCGCTCGTGGCAGGGGGCTCCCCTTCTGGCTCGGGCCAGGCGAGGGGTGGGGGCTaGCTTTCTCAGCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: CRLWVPLVAGGSPSGSGQARGGG*LSQLPG
Trigger: CCCTGGAAGCTGAGAAAGCCAGCCCCCACCCCTCGC...CTGGCCCGAGCCAGAAGGGGAGCCCCCTGCCACGAGCGGCACCCAGAGCCTGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp GGTCTGGGGGTGGGAGCTCAGCCGAGTGGGTGTTGCGAGAGGCCAGGGCGCCGGGGGAGCTCAGCCGAGTaGGTGTTGCGAGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GLGVGAQPSGCCERPGRRGSSAE*VLREAR
Trigger: CCTGGCCTCTCGCAACACCCACTCGGCTGAGCTCCC...CCGGCGCCCTGGCCTCTCGCAACACCCACTCGGCTGAGCTCCCACCCCCAGACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp CCGGCAGGAGGGTCCCCCGGCAGGAGCGTCCCAGCCACTCCGCAGTCACTCCTGAGAGCTGGTCCCGCGTaGGCCTCCCGATTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: PAGGSPGRSVPATPQSLLRAGPA*ASRFSP
Trigger: TGGGGAGAATCGGGAGGCCCACGCGGGACCAGCTCT...CAGGAGTGACTGCGGAGTGGCTGGGACGCTCCTGCCGGGGGACCCTCCTGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp ACCACGCTTCCTGAGAGGAGGGCCACGTCGCCCCAGGCCGGGCCACACGGGAAGGGTCTCCCTGCGTCCTaGGAGCTCTGGCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: TTLPERRATSPQAGPHGKGLPAS*ELWPRS
Trigger: GCTCCTCGGCCAGAGCTCCCAGGACGCAGGGAGACC...CTTCCCGTGTGGCCCGGCCTGGGGCGACGTGGCCCTCCTCTCAGGAAGCGTGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp CCGGCAGGAGGGTCCCCCGGCAGGAGCGTCCCAGCCACTCCGCAGTCACTCCTGCTTGGTCCATGGGGCTaGCCGGGCTTGCATCCCCAG +
Preference number: 4 (lower is better)
Translates to: PAGGSPGRSVPATPQSLLLGPWG*PGLHPQ
Trigger: CTGGGGATGCAAGCCCGGCCAGCCCCATGGACCAAG...CAGGAGTGACTGCGGAGTGGCTGGGACGCTCCTGCCGGGGGACCCTCCTGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp ACCACGCTTCCTGAGAGGAGGGCCACGTCGCCCCAGGCCGGGCCACACGGGAAGGCGGGGCTTGGTCCATaGGGCTGGCCGGGCTTGCAT +
Preference number: 4 (lower is better)
Translates to: TTLPERRATSPQAGPHGKAGLGP*GWPGLH
Trigger: ATGCAAGCCCGGCCAGCCCCATGGACCAAGCCCCGC...CTTCCCGTGTGGCCCGGCCTGGGGCGACGTGGCCCTCCTCTCAGGAAGCGTGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp CAGGTGGTCTGCAATGTACTGGACGCCCTCCACCGCCCGGGTCAGGGCCGGCGACGGACGGCCGCTTCATaGGGAGCAGGCGTGGCACGA +
Preference number: 4 (lower is better)
Translates to: QVVCNVLDALHRPGQGRRRTAAS*GAGVAR
Trigger: TCGTGCCACGCCTGCTCCTCATGAAGCGGCCGTCCG...TCGCCGGCCCTGACCCGGGCGGTGGAGGGCGTCCAGTACATTGCAGACCACCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR TCA 90 bp GAGGGCTGGTCTGGGGGTGGGAGCTCAGCCGAGTGGGTGTTGCGAGAGGCCAGGGCTTCCAGGGGCTGCTaGGGAGGGAGCTGGTCGGAG +
Preference number: 4 (lower is better)
Translates to: EGWSGGGSSAEWVLREARASRGC*GGSWSE
Trigger: CTCCGACCAGCTCCCTCCTCAGCAGCCCCTGGAAGC...CCTGGCCTCTCGCAACACCCACTCGGCTGAGCTCCCACCCCCAGACCAGCCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR TCA 90 bp ACCACGCTTCCTGAGAGGAGGGCCACGTCGCCCCAGGCCGGGCCACACGGGAAGTCCATGGCCCCGGGATaGCCTCACTCTCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: TTLPERRATSPQAGPHGKSMAPG*PHSPRV
Trigger: GACCCTGGGAGAGTGAGGTCATCCCGGGGCCATGGA...CTTCCCGTGTGGCCCGGCCTGGGGCGACGTGGCCCTCCTCTCAGGAAGCGTGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp CTTCAGGTGGTCTGCAATGTACTGGACGCCCTCCACCGCCCGGGTCAGGGCCGGGGCAGCCTGGCCATCTaGCTCGGGGGCGGCATCGTC +
Preference number: 4 (lower is better)
Translates to: LQVVCNVLDALHRPGQGRGSLAI*LGGGIV
Trigger: GACGATGCCGCCCCCGAGGCAGATGGCCAGGCTGCC...CCGGCCCTGACCCGGGCGGTGGAGGGCGTCCAGTACATTGCAGACCACCTGAAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR GCA 90 bp TGCCAGGACGGAGGGCATGGGCCTGTGTGGAAACCCCAGGGCTCCCTGACTCCCCAGCCGAGTGGGTGTTaGGAGAGGCCAGGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: CQDGGHGPVWKPQGSLTPQPSGC*ERPGRR
Trigger: CCGGCGCCCTGGCCTCTCGCAACACCCACTCGGCTG...GGGAGTCAGGGAGCCCTGGGGTTTCCACACAGGCCCATGCCCTCCGTCCTGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp GGGCCACGTCGCCCCAGGCCGGGCCACACGGGAAGCACCCAGGCCGGTCCGGAGACCAAACACAATCCCTaGCTGGACCCTCTCCTAGCG +
Preference number: 4 (lower is better)
Translates to: GPRRPRPGHTGSTQAGPETKHNP*LDPLLA
Trigger: CGCTAGGAGAGGGTCCAGGCAGGGATTGTGTTTGGT...CTCCGGACCGGCCTGGGTGCTTCCCGTGTGGCCCGGCCTGGGGCGACGTGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp GGGCCACGTCGCCCCAGGCCGGGCCACACGGGAAGCACCCAGGCCGGTCCGGAGACGGATAGAGTGCCATaGACACACCGGCACCTCCAT +
Preference number: 4 (lower is better)
Translates to: GPRRPRPGHTGSTQAGPETDRVP*THRHLH
Trigger: ATGGAGGTGCCGGTGTGTGCATGGCACTCTATCCGT...CTCCGGACCGGCCTGGGTGCTTCCCGTGTGGCCCGGCCTGGGGCGACGTGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp ATCGTCTCGGGGAACACAGTACTGGATGCTCCGAGACCGGCACCGGACGCCGCCCGGCCGCATGGATGCTaGCCCCGTGCACGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: IVSGNTVLDAPRPAPDAARPHGC*PRARQP
Trigger: GGGCTGCCGTGCACGGGGCCAGCATCCATGCGGCCG...GGCGGCGTCCGGTGCCGGTCTCGGAGCATCCAGTACTGTGTTCCCCGAGACGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp CCGGCAGGAGGGTCCCCCGGCAGGAGCGTCCCAGCCACTCCGCAGTCACTCCTGAGATTGGAGCGCTGCTaGCTCACCCTCATGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PAGGSPGRSVPATPQSLLRLERC*LTLMGP
Trigger: GGGCCCCATGAGGGTGAGCCAGCAGCGCTCCAATCT...CAGGAGTGACTGCGGAGTGGCTGGGACGCTCCTGCCGGGGGACCCTCCTGCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp ACCACGCTTCCTGAGAGGAGGGCCACGTCGCCCCAGGCCGGGCCACACGGGAAGGCCCCTCTGGGCCCTTaGAATCATGGAGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: TTLPERRATSPQAGPHGKAPLGP*NHGGVG
Trigger: CCCCACCCCTCCATGATTCCAAGGGCCCAGAGGGGC...CTTCCCGTGTGGCCCGGCCTGGGGCGACGTGGCCCTCCTCTCAGGAAGCGTGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp ACCACGCTTCCTGAGAGGAGGGCCACGTCGCCCCAGGCCGGGCCACACGGGAAGCTGGCCCCGCCCCTCTaGGCCCTTGGAATCATGGAG +
Preference number: 4 (lower is better)
Translates to: TTLPERRATSPQAGPHGKLAPPL*ALGIME
Trigger: CTCCATGATTCCAAGGGCCCAGAGGGGCGGGGCCAG...CTTCCCGTGTGGCCCGGCCTGGGGCGACGTGGCCCTCCTCTCAGGAAGCGTGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp TGCCAGAGCCCTGGCCCTACGCCTGGAAGGCAGAGTCCTGGTCTCCAGACTCGCACGGTCGGCGGGGCTTaGTCCATGGGGCTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: CQSPGPTPGRQSPGLQTRTVGGA*SMGLAG
Trigger: CCCGGCCAGCCCCATGGACCAAGCCCCGCCGACCGT...GCGAGTCTGGAGACCAGGACTCTGCCTTCCAGGCGTAGGGCCAGGGCTCTGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp GAGGGCTGGTCTGGGGGTGGGAGCTCAGCCGAGTGGGTGTTGCGAGAGGCCAGGCCTTGGTCAGGTGGGTaGCCGCGAAGTCCCCGTCAG +
Preference number: 4 (lower is better)
Translates to: EGWSGGGSSAEWVLREARPWSGG*PRSPRQ
Trigger: CTGACGGGGACTTCGCGGTCACCCACCTGACCAAGG...CCTGGCCTCTCGCAACACCCACTCGGCTGAGCTCCCACCCCCAGACCAGCCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR TCA 90 bp ACCACGCTTCCTGAGAGGAGGGCCACGTCGCCCCAGGCCGGGCCACACGGGAAGGCCGGCAATTGTCCTTaGCCACGGACGGCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: TTLPERRATSPQAGPHGKAGNCP*PRTAAS
Trigger: TGAAGCGGCCGTCCGTGGTCAAGGACAATTGCCGGC...CTTCCCGTGTGGCCCGGCCTGGGGCGACGTGGCCCTCCTCTCAGGAAGCGTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp GATGGGGAGGGACGCCGACAGGAAGGGCTGGAGGGACCTTCTAGGGGCTGGGTCTGGTGCTGCGGGTCTTaGCCGTGGCGCTCGGGGACA +
Preference number: 4 (lower is better)
Translates to: DGEGRRQEGLEGPSRGWVWCCGS*PWRSGT
Trigger: TGTCCCCGAGCGCCACGGTCAAGACCCGCAGCACCA...GACCCAGCCCCTAGAAGGTCCCTCCAGCCCTTCCTGTCGGCGTCCCTCCCCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp ACCACGCTTCCTGAGAGGAGGGCCACGTCGCCCCAGGCCGGGCCACACGGGAAGGATTACCACGCTTCCTaGGAGGAGGGCCACGTCGCC +
Preference number: 4 (lower is better)
Translates to: TTLPERRATSPQAGPHGKDYHAS*EEGHVA
Trigger: GGCGACGTGGCCCTCCTCTCAGGAAGCGTGGTAATC...CTTCCCGTGTGGCCCGGCCTGGGGCGACGTGGCCCTCCTCTCAGGAAGCGTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp GGGAGAAGCCAGCCCGGCCCCAGGCCGGCCGCATGGATGCTGGCCCCGTGCACGTGTGTGTGCTGCGCCTaGTCCAGCATTTCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: GRSQPGPRPAAWMLAPCTCVCCA*SSISGA
Trigger: TGCACCAGAAATGCTGGATCAGGCGCAGCACACACA...CGTGCACGGGGCCAGCATCCATGCGGCCGGCCTGGGGCCGGGCTGGCTTCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp TGCAGGCTCTGGGTGCCGCTCGTGGCAGGGGGCTCCCCTTCTGGCTCGGGCCAGGGCCAGGATGGGGTCTaGTGGCGAAAAGCACTCCTG +
Preference number: 4 (lower is better)
Translates to: CRLWVPLVAGGSPSGSGQGQDGV*WRKALL
Trigger: CAGGAGTGCTTTTCGCCATCAGACCCCATCCTGGCC...CTGGCCCGAGCCAGAAGGGGAGCCCCCTGCCACGAGCGGCACCCAGAGCCTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000498043.6
CDS-3UTR GCA 90 bp GGGAGAAGCCAGCCCGGCCCCAGGCCGGCCGCATGGATGCTGGCCCCGTGCACGGCACTGGCCATCTTATaGATGGACTCGATGAGCCGC +
Preference number: 4 (lower is better)
Translates to: GRSQPGPRPAAWMLAPCTALAIL*MDSMSR
Trigger: GCGGCTCATCGAGTCCATGCATAAGATGGCCAGTGC...CGTGCACGGGGCCAGCATCCATGCGGCCGGCCTGGGGCCGGGCTGGCTTCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370263.9
ENST00000498043.6
ENST00000627000.1
CDS-3UTR GCA 90 bp GAGCACATTCCAGGGCTTGGCAGACATTGCCTGCAGAAGCCGGGCGGCCGCACCGGTGCAGGCTCTGGGTaGCGCTCGTGGCAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: EHIPGLGRHCLQKPGGRTGAGSG*RSWQGA
Trigger: AGCCCCCTGCCACGAGCGGCACCCAGAGCCTGCACC...GGTGCGGCCGCCCGGCTTCTGCAGGCAATGTCTGCCAAGCCCTGGAATGTGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp TGGGTGCCGCTCGTGGCAGGGGGCTCCCCTTCTGGCTCGGGCCAGAAGCGCGGGGAACACAGTACTGGATaGTCCGAGACCGGCACCGGA +
Preference number: 4 (lower is better)
Translates to: WVPLVAGGSPSGSGQKRGEHSTG*SETGTG
Trigger: TCCGGTGCCGGTCTCGGAGCATCCAGTACTGTGTTC...CCCGCGCTTCTGGCCCGAGCCAGAAGGGGAGCCCCCTGCCACGAGCGGCACCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR GCA 90 bp ATTTGGCAAACGTGTGGCCCCACAGAGTCCAGGGAGAAGCCAGCCCGGCCCCAGGGCCGGCCGCATGGATaGTGGCCCCGTGCACGGCAG +
Preference number: 4 (lower is better)
Translates to: IWQTCGPTESREKPARPQGRPHG*WPRARQ
Trigger: CTGCCGTGCACGGGGCCAGCATCCATGCGGCCGGCC...CTGGGGCCGGGCTGGCTTCTCCCTGGACTCTGTGGGGCCACACGTTTGCCAAAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370263.9
ENST00000498043.6
ENST00000627000.1
CDS-3UTR GCA 90 bp GCCCACGGCATCCACGATGACCCACTCGCCACTCTCCCAGAAGTCCAGCTGGTCGGCCGGCCGCATGGATaGTGGCCCCGTGCACGGCAG +
Preference number: 4 (lower is better)
Translates to: AHGIHDDPLATLPEVQLVGRPHG*WPRARQ
Trigger: CTGCCGTGCACGGGGCCAGCATCCATGCGGCCGGCC...GACCAGCTGGACTTCTGGGAGAGTGGCGAGTGGGTCATCGTGGATGCCGTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp GGGGGTCACAGCCCTGGCAAGGTGGGTTCTAGGCAAGCTGTCCACCCCCGGGAAAGGGGGCTCCCCTTCTaGCTCGGGCCAGAAGCGCGG +
Preference number: 4 (lower is better)
Translates to: GGHSPGKVGSRQAVHPRERGLPF*LGPEAR
Trigger: CCGCGCTTCTGGCCCGAGCCAGAAGGGGAGCCCCCT...TTCCCGGGGGTGGACAGCTTGCCTAGAACCCACCTTGCCAGGGCTGTGACCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp GATGGGGAGGGACGCCGACAGGAAGGGCTGGAGGGACCTTCTAGGGGCTGGGTCTCTGGGTGCCGCTCGTaGCAGGGGGCTCCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: DGEGRRQEGLEGPSRGWVSGCRS*QGAPLL
Trigger: CAGAAGGGGAGCCCCCTGCCACGAGCGGCACCCAGA...GACCCAGCCCCTAGAAGGTCCCTCCAGCCCTTCCTGTCGGCGTCCCTCCCCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp ATTTGGCAAACGTGTGGCCCCACAGAGTCCAGGGAGAAGCCAGCCCGGCCCCAGGGCGGGTGCAGGCTCTaGGTGCCGCTCGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: IWQTCGPTESREKPARPQGGCRL*VPLVAG
Trigger: CCCTGCCACGAGCGGCACCCAGAGCCTGCACCCGCC...CTGGGGCCGGGCTGGCTTCTCCCTGGACTCTGTGGGGCCACACGTTTGCCAAAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370263.9
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp ACCACGCTTCCTGAGAGGAGGGCCACGTCGCCCCAGGCCGGGCCACACGGGAAGGGGCTGGACATGTGCTaGACGCTGAGGGACCTGGCT +
Preference number: 4 (lower is better)
Translates to: TTLPERRATSPQAGPHGKGLDMC*TLRDLA
Trigger: AGCCAGGTCCCTCAGCGTCCAGCACATGTCCAGCCC...CTTCCCGTGTGGCCCGGCCTGGGGCGACGTGGCCCTCCTCTCAGGAAGCGTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp CAGGTGGTCTGCAATGTACTGGACGCCCTCCACCGCCCGGGTCAGGGCCGGCGAGGGAGCTCAGCCGAGTaGGTGTTGCGAGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: QVVCNVLDALHRPGQGRRGSSAE*VLREAR
Trigger: CCTGGCCTCTCGCAACACCCACTCGGCTGAGCTCCC...TCGCCGGCCCTGACCCGGGCGGTGGAGGGCGTCCAGTACATTGCAGACCACCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp GCTTTGGTGCTGCGGGTCTTGACCGTGGCGCTCGGGGACACCGAAGAGGGCTCCCGGAGAGGGCTGGTCTaGGGGTGGGAGCTCAGCCGA +
Preference number: 4 (lower is better)
Translates to: ALVLRVLTVALGDTEEGSRRGLV*GWELSR
Trigger: TCGGCTGAGCTCCCACCCCCAGACCAGCCCTCTCCG...GGAGCCCTCTTCGGTGTCCCCGAGCGCCACGGTCAAGACCCGCAGCACCAAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp CCGGGGGAGTCCACTGCACCCGCCCGTCATGGAACAGGTGGGCCTTGGTCAGGTCGGAGAGGGCTGGTCTaGGGGTGGGAGCTCAGCCGA +
Preference number: 4 (lower is better)
Translates to: PGESTAPARHGTGGPWSGRRGLV*GWELSR
Trigger: TCGGCTGAGCTCCCACCCCCAGACCAGCCCTCTCCG...ACCTGACCAAGGCCCACCTGTTCCATGACGGGCGGGTGCAGTGGACTCCCCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp CCACAGTCCAACTGGAAGCAGCTCCACACTCGGTCTCCCCAGAGGCCGTGTCCCCCCAGGCCGGCCGCATaGATGCTGGCCCCGTGCACG +
Preference number: 4 (lower is better)
Translates to: PQSNWKQLHTRSPQRPCPPRPAA*MLAPCT
Trigger: CGTGCACGGGGCCAGCATCCATGCGGCCGGCCTGGG...GGGACACGGCCTCTGGGGAGACCGAGTGTGGAGCTGCTTCCAGTTGGACTGTGG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp CCGGCAGGAGGGTCCCCCGGCAGGAGCGTCCCAGCCACTCCGCAGTCACTCCTGCCTAGCGAAGCAGATTaGAGCGCTGCTGGCTCACCC +
Preference number: 4 (lower is better)
Translates to: PAGGSPGRSVPATPQSLLPSEAD*SAAGSP
Trigger: GGGTGAGCCAGCAGCGCTCCAATCTGCTTCGCTAGG...CAGGAGTGACTGCGGAGTGGCTGGGACGCTCCTGCCGGGGGACCCTCCTGCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp CCACAGTCCAACTGGAAGCAGCTCCACACTCGGTCTCCCCAGAGGCCGTGTCCCTGCGCAGGGGAGAGCTaGTCCCGCGTGGGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: PQSNWKQLHTRSPQRPCPCAGES*SRVGLP
Trigger: CGGGAGGCCCACGCGGGACCAGCTCTCCCCTGCGCA...GGGACACGGCCTCTGGGGAGACCGAGTGTGGAGCTGCTTCCAGTTGGACTGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp GGCCTTCAGGTGGTCTGCAATGTACTGGACGCCCTCCACCGCCCGGGTCAGGGCGACACAGAAGGACGGTaGGGGCGGGTGCAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GLQVVCNVLDALHRPGQGDTEGR*GRVQAL
Trigger: CAGAGCCTGCACCCGCCCTCACCGTCCTTCTGTGTC...GCCCTGACCCGGGCGGTGGAGGGCGTCCAGTACATTGCAGACCACCTGAAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR TCA 90 bp TGGTCGGAGGGTGACTTGCAGGAAGGCCCAGGCTCAGCCGGCACATCCAGGGGGGACACAGAAGGACGGTaGGGGCGGGTGCAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: WSEGDLQEGPGSAGTSRGDTEGR*GRVQAL
Trigger: CAGAGCCTGCACCCGCCCTCACCGTCCTTCTGTGTC...CCCCCTGGATGTGCCGGCTGAGCCTGGGCCTTCCTGCAAGTCACCCTCCGACCA
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR TCA 90 bp GATGGGGAGGGACGCCGACAGGAAGGGCTGGAGGGACCTTCTAGGGGCTGGGTCGAGCTGGTCGGAGGGTaGCTTGCAGGAAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: DGEGRRQEGLEGPSRGWVELVGG*LAGRPR
Trigger: CCTGGGCCTTCCTGCAAGTCACCCTCCGACCAGCTC...GACCCAGCCCCTAGAAGGTCCCTCCAGCCCTTCCTGTCGGCGTCCCTCCCCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp GCTTTGGTGCTGCGGGTCTTGACCGTGGCGCTCGGGGACACCGAAGAGGGCTCCGAGCTGGTCGGAGGGTaGCTTGCAGGAAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: ALVLRVLTVALGDTEEGSELVGG*LAGRPR
Trigger: CCTGGGCCTTCCTGCAAGTCACCCTCCGACCAGCTC...GGAGCCCTCTTCGGTGTCCCCGAGCGCCACGGTCAAGACCCGCAGCACCAAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR TCA 90 bp TCTCGGGGAACACAGTACTGGATGCTCCGAGACCGGCACCGGACGCCGCCTTCCTGGTGCTGCGGGTCTTaGCCGTGGCGCTCGGGGACA +
Preference number: 4 (lower is better)
Translates to: SRGTQYWMLRDRHRTPPSWCCGS*PWRSGT
Trigger: TGTCCCCGAGCGCCACGGTCAAGACCCGCAGCACCA...GGAAGGCGGCGTCCGGTGCCGGTCTCGGAGCATCCAGTACTGTGTTCCCCGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR TCA 90 bp CCGGCAGGAGGGTCCCCCGGCAGGAGCGTCCCAGCCACTCCGCAGTCACTCCTGGGAAGATGCGGTCGATaGCCATGGCCACGTACTTCC +
Preference number: 4 (lower is better)
Translates to: PAGGSPGRSVPATPQSLLGRCGR*PWPRTS
Trigger: GGAAGTACGTGGCCATGGTCATCGACCGCATCTTCC...CAGGAGTGACTGCGGAGTGGCTGGGACGCTCCTGCCGGGGGACCCTCCTGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp GGGCGGGTGCAGGCTCTGGGTGCCGCTCGTGGCAGGGGGCTCCCCTTCTGGCTCGCACTGGCCATCTTATaGATGGACTCGATGAGCCGC +
Preference number: 4 (lower is better)
Translates to: GRVQALGAARGRGLPFWLALAIL*MDSMSR
Trigger: GCGGCTCATCGAGTCCATGCATAAGATGGCCAGTGC...GAGCCAGAAGGGGAGCCCCCTGCCACGAGCGGCACCCAGAGCCTGCACCCGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR GCA 90 bp GCATCCACGATGACCCACTCGCCACTCTCCCAGAAGTCCAGCTGGTCCACGCGGTTTGGCCAGCCCTGGTaGCTGGGTGCCGTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: ASTMTHSPLSQKSSWSTRFGQPW*LGAVGR
Trigger: CCGCCCCACGGCACCCAGGCACCAGGGCTGGCCAAA...CCGCGTGGACCAGCTGGACTTCTGGGAGAGTGGCGAGTGGGTCATCGTGGATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR GCA 90 bp GTCTGGGGGTGGGAGCTCAGCCGAGTGGGTGTTGCGAGAGGCCAGGGCGCCGGCGGCCTTCAGGTGGTCTaGAATGTACTGGACGCCCTC +
Preference number: 4 (lower is better)
Translates to: VWGWELSRVGVARGQGAGGLQVV*NVLDAL
Trigger: GAGGGCGTCCAGTACATTGCAGACCACCTGAAGGCC...GCCGGCGCCCTGGCCTCTCGCAACACCCACTCGGCTGAGCTCCCACCCCCAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR GCA 90 bp TGGGGGTGGGAGCTCAGCCGAGTGGGTGTTGCGAGAGGCCAGGGCGCCGGCAGCCTCTCCAGGGCACCCTaGAGTCCACACTATTCTCCC +
Preference number: 4 (lower is better)
Translates to: WGWELSRVGVARGQGAGSLSRAP*SPHYSP
Trigger: GGGAGAATAGTGTGGACTGCAGGGTGCCCTGGAGAG...GCTGCCGGCGCCCTGGCCTCTCGCAACACCCACTCGGCTGAGCTCCCACCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498043.6
CDS-3UTR CCA 90 bp GGTCTCCCCAGAGGCCGTGTCCCCGTCCAAGGCCGTCTTACAGCAGACACAGAAGGCCCCCTAGCTCCATaGCGCACGCACCTCGCGGGC +
Preference number: 4 (lower is better)
Translates to: GLPRGRVPVQGRLTADTEGPLAP*RTHLAG
Trigger: GCCCGCGAGGTGCGTGCGCCATGGAGCTAGGGGGCC...TTCTGTGTCTGCTGTAAGACGGCCTTGGACGGGGACACGGCCTCTGGGGAGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp GAACCAGGGCCCAGGTCTGGACTCCATTCGGGACCTTCCCAGCTCCGGGGAATCGCCCGGGTCTCCACATaGCTGCTGGCGCGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: EPGPRSGLHSGPSQLRGIARVST*LLARRR
Trigger: CCTCCTGCGCGCCAGCAGCCATGTGGAGACCCGGGC...GATTCCCCGGAGCTGGGAAGGTCCCGAATGGAGTCCAGACCTGGGCCCTGGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp TGGGTGCCGCTCGTGGCAGGGGGCTCCCCTTCTGGCTCGGGCCAGAAGCGCGGGAGAAGCGCGGGGCACTaGCCATCTTATGCATGGACT +
Preference number: 4 (lower is better)
Translates to: WVPLVAGGSPSGSGQKRGRSAGH*PSYAWT
Trigger: AGTCCATGCATAAGATGGCCAGTGCCCCGCGCTTCT...CCCGCGCTTCTGGCCCGAGCCAGAAGGGGAGCCCCCTGCCACGAGCGGCACCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp ATTTGGCAAACGTGTGGCCCCACAGAGTCCAGGGAGAAGCCAGCCCGGCCCCAGAGGGGGCTCCCCTTCTaGCTCGGGCCAGAAGCGCGG +
Preference number: 4 (lower is better)
Translates to: IWQTCGPTESREKPARPQRGLPF*LGPEAR
Trigger: CCGCGCTTCTGGCCCGAGCCAGAAGGGGAGCCCCCT...CTGGGGCCGGGCTGGCTTCTCCCTGGACTCTGTGGGGCCACACGTTTGCCAAAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000370263.9
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp GGCATCGTCTCGGGGAACACAGTACTGGATGCTCCGAGACCGGCACCGGACGCCTCTGGGTGCCGCTCGTaGCAGGGGGCTCCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: GIVSGNTVLDAPRPAPDASGCRS*QGAPLL
Trigger: CAGAAGGGGAGCCCCCTGCCACGAGCGGCACCCAGA...GGCGTCCGGTGCCGGTCTCGGAGCATCCAGTACTGTGTTCCCCGAGACGATGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp GAGGGCTGGTCTGGGGGTGGGAGCTCAGCCGAGTGGGTGTTGCGAGAGGCCAGGGGGCTGGACATGTGCTaGACGCTGAGGGACCTGGCT +
Preference number: 4 (lower is better)
Translates to: EGWSGGGSSAEWVLREARGLDMC*TLRDLA
Trigger: AGCCAGGTCCCTCAGCGTCCAGCACATGTCCAGCCC...CCTGGCCTCTCGCAACACCCACTCGGCTGAGCTCCCACCCCCAGACCAGCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp GAGCACATTCCAGGGCTTGGCAGACATTGCCTGCAGAAGCCGGGCGGCCGCACCCGGAGAGGGCTGGTCTaGGGGTGGGAGCTCAGCCGA +
Preference number: 4 (lower is better)
Translates to: EHIPGLGRHCLQKPGGRTRRGLV*GWELSR
Trigger: TCGGCTGAGCTCCCACCCCCAGACCAGCCCTCTCCG...GGTGCGGCCGCCCGGCTTCTGCAGGCAATGTCTGCCAAGCCCTGGAATGTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp GAGGGCTGGTCTGGGGGTGGGAGCTCAGCCGAGTGGGTGTTGCGAGAGGCCAGGTGGTCTGCAATGTACTaGACGCCCTCCACCGCCCGG +
Preference number: 4 (lower is better)
Translates to: EGWSGGGSSAEWVLREARWSAMY*TPSTAR
Trigger: CCGGGCGGTGGAGGGCGTCCAGTACATTGCAGACCA...CCTGGCCTCTCGCAACACCCACTCGGCTGAGCTCCCACCCCCAGACCAGCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp GGGAGAAGCCAGCCCGGCCCCAGGCCGGCCGCATGGATGCTGGCCCCGTGCACGAATTTGGCAAACGTGTaGCCCCACAGAGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: GRSQPGPRPAAWMLAPCTNLANV*PHRVQG
Trigger: TCCCTGGACTCTGTGGGGCCACACGTTTGCCAAATT...CGTGCACGGGGCCAGCATCCATGCGGCCGGCCTGGGGCCGGGCTGGCTTCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370263.9
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp TGCCAGAGCCCTGGCCCTACGCCTGGAAGGCAGAGTCCTGGTCTCCAGACTCGCCAGACTCGCTGGGGCTaGGTGTTCCTGTCCCCCGCG +
Preference number: 4 (lower is better)
Translates to: CQSPGPTPGRQSPGLQTRQTRWG*VFLSPA
Trigger: CGCGGGGGACAGGAACACCCAGCCCCAGCGAGTCTG...GCGAGTCTGGAGACCAGGACTCTGCCTTCCAGGCGTAGGGCCAGGGCTCTGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp GAGCACATTCCAGGGCTTGGCAGACATTGCCTGCAGAAGCCGGGCGGCCGCACCGGCCAGGGCCTTCACTaGGGCCTCCCCTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: EHIPGLGRHCLQKPGGRTGQGLH*GLPWEG
Trigger: TCCTTCCCAGGGGAGGCCCCAGTGAAGGCCCTGGCC...GGTGCGGCCGCCCGGCTTCTGCAGGCAATGTCTGCCAAGCCCTGGAATGTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp GAACCAGGGCCCAGGTCTGGACTCCATTCGGGACCTTCCCAGCTCCGGGGAATCGGGGCTGGGAAGCCCTaGCCAGGGCCTTCACTGGGG +
Preference number: 4 (lower is better)
Translates to: EPGPRSGLHSGPSQLRGIGAGKP*PGPSLG
Trigger: CCCCAGTGAAGGCCCTGGCCAGGGCTTCCCAGCCCC...GATTCCCCGGAGCTGGGAAGGTCCCGAATGGAGTCCAGACCTGGGCCCTGGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp AGGCGTGGCACGATGTCCAGGAAGACCCTGCGTACCCAGGTGGGCATGGTGTGCTGTCCGGCCGCCAGATaGGCTCGGAGGGGATGCGGA +
Preference number: 4 (lower is better)
Translates to: RRGTMSRKTLRTQVGMVCCPAAR*ARRGCG
Trigger: TCCGCATCCCCTCCGAGCTCATCTGGCGGCCGGACA...GCACACCATGCCCACCTGGGTACGCAGGGTCTTCCTGGACATCGTGCCACGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR TCA 90 bp GAACCAGGGCCCAGGTCTGGACTCCATTCGGGACCTTCCCAGCTCCGGGGAATCGGGGCTGAAGGGGCGTaGACTCCCTTCAAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: EPGPRSGLHSGPSQLRGIGAEGA*TPFKGP
Trigger: GGGGCCCTTGAAGGGAGTTCACGCCCCTTCAGCCCC...GATTCCCCGGAGCTGGGAAGGTCCCGAATGGAGTCCAGACCTGGGCCCTGGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp GAGCACATTCCAGGGCTTGGCAGACATTGCCTGCAGAAGCCGGGCGGCCGCACCCCGCTTCGAGGCCCGTaGGCGCCCAACTTCATGCCT +
Preference number: 4 (lower is better)
Translates to: EHIPGLGRHCLQKPGGRTPLRGP*APNFMP
Trigger: AGGCATGAAGTTGGGCGCGCACGGGCCTCGAAGCGG...GGTGCGGCCGCCCGGCTTCTGCAGGCAATGTCTGCCAAGCCCTGGAATGTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp GAACCAGGGCCCAGGTCTGGACTCCATTCGGGACCTTCCCAGCTCCGGGGAATCGCCGGGGGAGTCCACTaGACCCGCCCGTCATGGAAC +
Preference number: 4 (lower is better)
Translates to: EPGPRSGLHSGPSQLRGIAGGVH*TRPSWN
Trigger: GTTCCATGACGGGCGGGTGCAGTGGACTCCCCCGGC...GATTCCCCGGAGCTGGGAAGGTCCCGAATGGAGTCCAGACCTGGGCCCTGGTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp ATGACCCACTCGCCACTCTCCCAGAAGTCCAGCTGGTCCACGCGGCTGTGCATGCAGCCGAGTGGGTGTTaGGAGAGGCCAGGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: MTHSPLSQKSSWSTRLCMQPSGC*ERPGRR
Trigger: CCGGCGCCCTGGCCTCTCGCAACACCCACTCGGCTG...CATGCACAGCCGCGTGGACCAGCTGGACTTCTGGGAGAGTGGCGAGTGGGTCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR GCA 90 bp TGGGTGCCGCTCGTGGCAGGGGGCTCCCCTTCTGGCTCGGGCCAGAAGCGCGGGTCTTGCATGTGCATTTaGACGGAGAGGGCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: WVPLVAGGSPSGSGQKRGSCMCI*TERAGL
Trigger: CAGACCAGCCCTCTCCGTGCAAATGCACATGCAAGA...CCCGCGCTTCTGGCCCGAGCCAGAAGGGGAGCCCCCTGCCACGAGCGGCACCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR GCA 90 bp ATTTGGCAAACGTGTGGCCCCACAGAGTCCAGGGAGAAGCCAGCCCGGCCCCAGGCGGATCTCCCGGGCTaGGCGCCAAGGTGGAAACCC +
Preference number: 4 (lower is better)
Translates to: IWQTCGPTESREKPARPQADLPG*APRWKP
Trigger: GGGTTTCCACCTTGGCGCGCAGCCCGGGAGATCCGC...CTGGGGCCGGGCTGGCTTCTCCCTGGACTCTGTGGGGCCACACGTTTGCCAAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp CAAGGGCCCCTTGGGGCGGTCGGGACCATCACCAGATCTGCTGAGAGACTGGGAGAGCTCTGCCTGCCCTaGCAGGACGGAGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: QGPLGAVGTITRSAERLGELCLP*QDGGHG
Trigger: CCCATGCCCTCCGTCCTGGCAGGGCAGGCAGAGCTC...TCCCAGTCTCTCAGCAGATCTGGTGATGGTCCCGACCGCCCCAAGGGGCCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp GATGGGGAGGGACGCCGACAGGAAGGGCTGGAGGGACCTTCTAGGGGCTGGGTCGCCATCTTTAGGGGGTaGACTGCCGGGCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: DGEGRRQEGLEGPSRGWVAIFRG*TAGLQG
Trigger: ACCCTGGAGCCCGGCAGTGCACCCCCTAAAGATGGC...GACCCAGCCCCTAGAAGGTCCCTCCAGCCCTTCCTGTCGGCGTCCCTCCCCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp GAGCACATTCCAGGGCTTGGCAGACATTGCCTGCAGAAGCCGGGCGGCCGCACCGGGCTTGGCAGACATTaGCTGCAGAAGCCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: EHIPGLGRHCLQKPGGRTGLGRH*LQKPGG
Trigger: GCCGCCCGGCTTCTGCAGGCAATGTCTGCCAAGCCC...GGTGCGGCCGCCCGGCTTCTGCAGGCAATGTCTGCCAAGCCCTGGAATGTGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp TGTCTCCTCCTGAACCGATGTCACTCACAGGCAGGGGACACGCCATCCTGGCCCAGCCGCTCCTCGGCGTaGGCCCGGGTCTCCACATGG +
Preference number: 4 (lower is better)
Translates to: CLLLNRCHSQAGDTPSWPSRSSA*ARVSTW
Trigger: CCATGTGGAGACCCGGGCCCACGCCGAGGAGCGGCT...GGGCCAGGATGGCGTGTCCCCTGCCTGTGAGTGACATCGGTTCAGGAGGAGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp TGCCAGGACGGAGGGCATGGGCCTGTGTGGAAACCCCAGGGCTCCCTGACTCCCCCACGTCCGAGATGTTaGCCACGGGTCGGGACCACT +
Preference number: 4 (lower is better)
Translates to: CQDGGHGPVWKPQGSLTPPRPRC*PRVGTT
Trigger: AGTGGTCCCGACCCGTGGCCAACATCTCGGACGTGG...GGGAGTCAGGGAGCCCTGGGGTTTCCACACAGGCCCATGCCCTCCGTCCTGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp CGCTTTGGTGCTGCGGGTCTTGACCGTGGCGCTCGGGGACACCGAAGAGGGCTCTTGCACGGAGAGGGCTaGTCTGGGGGTGGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: RFGAAGLDRGARGHRRGLLHGEG*SGGGSS
Trigger: TGAGCTCCCACCCCCAGACCAGCCCTCTCCGTGCAA...GAGCCCTCTTCGGTGTCCCCGAGCGCCACGGTCAAGACCCGCAGCACCAAAGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp GATGGGGAGGGACGCCGACAGGAAGGGCTGGAGGGACCTTCTAGGGGCTGGGTCAAACCCTCAGGGTCCTaGGGGAACCAGGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: DGEGRRQEGLEGPSRGWVKPSGS*GNQGPG
Trigger: ACCTGGGCCCTGGTTCCCCCAGGACCCTGAGGGTTT...GACCCAGCCCCTAGAAGGTCCCTCCAGCCCTTCCTGTCGGCGTCCCTCCCCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp GGGGGTCACAGCCCTGGCAAGGTGGGTTCTAGGCAAGCTGTCCACCCCCGGGAAGGGCATGGGCCTGTGTaGAAACCCCAGGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GGHSPGKVGSRQAVHPREGHGPV*KPQGSL
Trigger: CAGGGAGCCCTGGGGTTTCCACACAGGCCCATGCCC...TTCCCGGGGGTGGACAGCTTGCCTAGAACCCACCTTGCCAGGGCTGTGACCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp CAAGGGCCCCTTGGGGCGGTCGGGACCATCACCAGATCTGCTGAGAGACTGGGACCGCTGCCTGGTGCCTaGCACAGGGCGGGGAAACGT +
Preference number: 4 (lower is better)
Translates to: QGPLGAVGTITRSAERLGPLPGA*HRAGKR
Trigger: ACGTTTCCCCGCCCTGTGCCAGGCACCAGGCAGCGG...TCCCAGTCTCTCAGCAGATCTGGTGATGGTCCCGACCGCCCCAAGGGGCCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR CAA 72 bp GTCCACTGCACCCGCCCGTCATGGAACAGGTGGGCCTaGGTCAGGTGGGTGACCGCGAAGTCCCCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: VHCTRPSWNRWA*VRWVTAKSPSA
Trigger: TGCTGACGGGGACTTCGCGGTCACCCACCTGACCAAGGCCCACCTGTTCCATGACGGGCGGGTGCAGTGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627000.1
CDS-3UTR TCA 90 bp TGGGGGTGGGAGCTCAGCCGAGTGGGTGTTGCGAGAGGCCAGGGCGCCGGCAGCGGATGCGGATGGAGGTaGCATTCTCATAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: WGWELSRVGVARGQGAGSGCGWR*HSHSQL
Trigger: CAGCTGACTATGAGAATGTCACCTCCATCCGCATCC...GCTGCCGGCGCCCTGGCCTCTCGCAACACCCACTCGGCTGAGCTCCCACCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR TCA 90 bp GAACCAGGGCCCAGGTCTGGACTCCATTCGGGACCTTCCCAGCTCCGGGGAATCCCTTGGTCAGGTGGGTaGCCGCGAAGTCCCCGTCAG +
Preference number: 4 (lower is better)
Translates to: EPGPRSGLHSGPSQLRGIPWSGG*PRSPRQ
Trigger: CTGACGGGGACTTCGCGGTCACCCACCTGACCAAGG...GATTCCCCGGAGCTGGGAAGGTCCCGAATGGAGTCCAGACCTGGGCCCTGGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp GCATCCACGATGACCCACTCGCCACTCTCCCAGAAGTCCAGCTGGTCCACGCGGCCTTGGTCAGGTGGGTaGCCGCGAAGTCCCCGTCAG +
Preference number: 4 (lower is better)
Translates to: ASTMTHSPLSQKSSWSTRPWSGG*PRSPRQ
Trigger: CTGACGGGGACTTCGCGGTCACCCACCTGACCAAGG...CCGCGTGGACCAGCTGGACTTCTGGGAGAGTGGCGAGTGGGTCATCGTGGATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR TCA 90 bp GGCATCGTCTCGGGGAACACAGTACTGGATGCTCCGAGACCGGCACCGGACGCCGCCGGCAATTGTCCTTaGCCACGGACGGCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: GIVSGNTVLDAPRPAPDAAGNCP*PRTAAS
Trigger: TGAAGCGGCCGTCCGTGGTCAAGGACAATTGCCGGC...GGCGTCCGGTGCCGGTCTCGGAGCATCCAGTACTGTGTTCCCCGAGACGATGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR TCA 90 bp GTCTGCAATGTACTGGACGCCCTCCACCGCCCGGGTCAGGGCCGGCGACAGGGGTATGCATGGACTCGATaGGCCGCCGGCAATTGTCCT +
Preference number: 4 (lower is better)
Translates to: VCNVLDALHRPGQGRRQGYAWTR*AAGNCP
Trigger: AGGACAATTGCCGGCGGCTCATCGAGTCCATGCATA...CCCCTGTCGCCGGCCCTGACCCGGGCGGTGGAGGGCGTCCAGTACATTGCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR TCA 90 bp TGTCTCCTCCTGAACCGATGTCACTCACAGGCAGGGGACACGCCATCCTGGCCCGCTTCCAGGGGCTGCTaGGGAGGGAGCTGGTCGGAG +
Preference number: 4 (lower is better)
Translates to: CLLLNRCHSQAGDTPSWPASRGC*GGSWSE
Trigger: CTCCGACCAGCTCCCTCCTCAGCAGCCCCTGGAAGC...GGGCCAGGATGGCGTGTCCCCTGCCTGTGAGTGACATCGGTTCAGGAGGAGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp CCTGCCCCGAGGGTCCCAGCATCTCCCAGGTGGAGGTCCTCAAGGATGCCCCCAACATGTGCTGGACGCTaGGGGACCTGGCTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: PAPRVPASPRWRSSRMPPTCAGR*GTWLWP
Trigger: TGGCCAAAGCCAGGTCCCTCAGCGTCCAGCACATGT...TGGGGGCATCCTTGAGGACCTCCACCTGGGAGATGCTGGGACCCTCGGGGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp GGTCTCCCCAGAGGCCGTGTCCCCGTCCAAGGCCGTCTTACAGCAGACACAGAAACCCGGGGGTGGGGGTaGCCAGCAGCAGTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: GLPRGRVPVQGRLTADTETRGWG*PAAVQR
Trigger: CCTCTGAACTGCTGCTGGTCACCCCCACCCCCGGGT...TTCTGTGTCTGCTGTAAGACGGCCTTGGACGGGGACACGGCCTCTGGGGAGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp CTGGACATGTGCTGGACGCTGAGGGACCTGGCTTTGGCCAGCCCTGGTGCCTGGCCAGGGCTGGACATGTaGTGGACGCTGAGGGACCTG +
Preference number: 4 (lower is better)
Translates to: LDMCWTLRDLALASPGAWPGLDM*WTLRDL
Trigger: CAGGTCCCTCAGCGTCCAGCACATGTCCAGCCCTGG...CCAGGCACCAGGGCTGGCCAAAGCCAGGTCCCTCAGCGTCCAGCACATGTCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR GCA 90 bp GCCGGGGGAGTCCACTGCACCCGCCCGTCATGGAACAGGTGGGCCTTGGTCAGGGGCCTTCAGGTGGTCTaGAATGTACTGGACGCCCTC +
Preference number: 4 (lower is better)
Translates to: AGGVHCTRPSWNRWALVRGLQVV*NVLDAL
Trigger: GAGGGCGTCCAGTACATTGCAGACCACCTGAAGGCC...CCTGACCAAGGCCCACCTGTTCCATGACGGGCGGGTGCAGTGGACTCCCCCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR GCA 90 bp TGTCTCCTCCTGAACCGATGTCACTCACAGGCAGGGGACACGCCATCCTGGCCCCCAGGGGGCTGGGGATaGCCAGGATTTGGCACGGGG +
Preference number: 4 (lower is better)
Translates to: CLLLNRCHSQAGDTPSWPPGGWG*PGFGTG
Trigger: CCCCGTGCCAAATCCTGGGCATCCCCAGCCCCCTGG...GGGCCAGGATGGCGTGTCCCCTGCCTGTGAGTGACATCGGTTCAGGAGGAGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp TGTCTCCTCCTGAACCGATGTCACTCACAGGCAGGGGACACGCCATCCTGGCCCCTCCCAGGGTCTCCCTaGGTCCTGGGAGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: CLLLNRCHSQAGDTPSWPLPGSP*VLGALA
Trigger: GGCCAGAGCTCCCAGGACGCAGGGAGACCCTGGGAG...GGGCCAGGATGGCGTGTCCCCTGCCTGTGAGTGACATCGGTTCAGGAGGAGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp CAAGGGCCCCTTGGGGCGGTCGGGACCATCACCAGATCTGCTGAGAGACTGGGACCCACAGCAGCTGCGTaGCCTAGAGTGTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QGPLGAVGTITRSAERLGPTAAA*PRVSWA
Trigger: GGCCCAGGACACTCTAGGGCACGCAGCTGCTGTGGG...TCCCAGTCTCTCAGCAGATCTGGTGATGGTCCCGACCGCCCCAAGGGGCCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp CAGCCTGGCCATCTGCCTCGGGGGCGGCATCGTCTCGGGGAACACAGTACTGGACCACGTCCGAGATGTTaGCCACGGGTCGGGACCACT +
Preference number: 4 (lower is better)
Translates to: QPGHLPRGRHRLGEHSTGPRPRC*PRVGTT
Trigger: AGTGGTCCCGACCCGTGGCCAACATCTCGGACGTGG...TCCAGTACTGTGTTCCCCGAGACGATGCCGCCCCCGAGGCAGATGGCCAGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp TGCCAGGACGGAGGGCATGGGCCTGTGTGGAAACCCCAGGGCTCCCTGACTCCCCCGTCATGGAACAGGTaGGCCTTGGTCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: CQDGGHGPVWKPQGSLTPPSWNR*ALVRWV
Trigger: CACCCACCTGACCAAGGCCCACCTGTTCCATGACGG...GGGAGTCAGGGAGCCCTGGGGTTTCCACACAGGCCCATGCCCTCCGTCCTGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp GGCCTTCAGGTGGTCTGCAATGTACTGGACGCCCTCCACCGCCCGGGTCAGGGCTCCCAGAAGTCCAGCTaGTCCACGCGGCTGTGCATG +
Preference number: 4 (lower is better)
Translates to: GLQVVCNVLDALHRPGQGSQKSS*STRLCM
Trigger: CATGCACAGCCGCGTGGACCAGCTGGACTTCTGGGA...GCCCTGACCCGGGCGGTGGAGGGCGTCCAGTACATTGCAGACCACCTGAAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp ATTTGGCAAACGTGTGGCCCCACAGAGTCCAGGGAGAAGCCAGCCCGGCCCCAGGTACCCAGGTGGGCATaGTGTGCGTGCGTGGCGAGC +
Preference number: 4 (lower is better)
Translates to: IWQTCGPTESREKPARPQVPRWA*CACVAS
Trigger: GCTCGCCACGCACGCACACCATGCCCACCTGGGTAC...CTGGGGCCGGGCTGGCTTCTCCCTGGACTCTGTGGGGCCACACGTTTGCCAAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370263.9
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp GAACCAGGGCCCAGGTCTGGACTCCATTCGGGACCTTCCCAGCTCCGGGGAATCCCCTGCGTACCCAGGTaGGCATGGTGTGCGTGCGTG +
Preference number: 4 (lower is better)
Translates to: EPGPRSGLHSGPSQLRGIPCVPR*AWCACV
Trigger: CACGCACGCACACCATGCCCACCTGGGTACGCAGGG...GATTCCCCGGAGCTGGGAAGGTCCCGAATGGAGTCCAGACCTGGGCCCTGGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp GTCTGCAATGTACTGGACGCCCTCCACCGCCCGGGTCAGGGCCGGCGACAGGGGAGAAGCGCGGGGCACTaGCCATCTTATGCATGGACT +
Preference number: 4 (lower is better)
Translates to: VCNVLDALHRPGQGRRQGRSAGH*PSYAWT
Trigger: AGTCCATGCATAAGATGGCCAGTGCCCCGCGCTTCT...CCCCTGTCGCCGGCCCTGACCCGGGCGGTGGAGGGCGTCCAGTACATTGCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp CCGGCAGGAGGGTCCCCCGGCAGGAGCGTCCCAGCCACTCCGCAGTCACTCCTGTCTTCGGCCTTCAGGTaGTCTGCAATGTACTGGACG +
Preference number: 4 (lower is better)
Translates to: PAGGSPGRSVPATPQSLLSSAFR*SAMYWT
Trigger: CGTCCAGTACATTGCAGACCACCTGAAGGCCGAAGA...CAGGAGTGACTGCGGAGTGGCTGGGACGCTCCTGCCGGGGGACCCTCCTGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp GAACCAGGGCCCAGGTCTGGACTCCATTCGGGACCTTCCCAGCTCCGGGGAATCGCTGGCTCACCCTCATaGGGCCCGAGAGGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: EPGPRSGLHSGPSQLRGIAGSPS*GPRGSR
Trigger: CCTTGAGCCTCTCGGGCCCCATGAGGGTGAGCCAGC...GATTCCCCGGAGCTGGGAAGGTCCCGAATGGAGTCCAGACCTGGGCCCTGGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp GATGGGGAGGGACGCCGACAGGAAGGGCTGGAGGGACCTTCTAGGGGCTGGGTCTGGAAGGCAGAGTCCTaGTCTCCAGACTCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: DGEGRRQEGLEGPSRGWVWKAES*SPDSLG
Trigger: CCCCAGCGAGTCTGGAGACCAGGACTCTGCCTTCCA...GACCCAGCCCCTAGAAGGTCCCTCCAGCCCTTCCTGTCGGCGTCCCTCCCCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp GGGGGTCACAGCCCTGGCAAGGTGGGTTCTAGGCAAGCTGTCCACCCCCGGGAACCCTGGCCCTACGCCTaGAAGGCAGAGTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: GGHSPGKVGSRQAVHPREPWPYA*KAESWS
Trigger: AGACCAGGACTCTGCCTTCCAGGCGTAGGGCCAGGG...TTCCCGGGGGTGGACAGCTTGCCTAGAACCCACCTTGCCAGGGCTGTGACCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp ATTTGGCAAACGTGTGGCCCCACAGAGTCCAGGGAGAAGCCAGCCCGGCCCCAGCTCCTGACGAGACCCTaGCCCAGGAGAGCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: IWQTCGPTESREKPARPQLLTRP*PRRARL
Trigger: GAGCCGAGCTCTCCTGGGCCAGGGTCTCGTCAGGAG...CTGGGGCCGGGCTGGCTTCTCCCTGGACTCTGTGGGGCCACACGTTTGCCAAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp TGCTGGACGCTGAGGGACCTGGCTTTGGCCAGCCCTGGTGCCTGGGTGCCGTGGTCTCATCCACGTCAATaGGCTGAGCGATGGACAGGC +
Preference number: 4 (lower is better)
Translates to: CWTLRDLALASPGAWVPWSHPRQ*AERWTG
Trigger: GCCTGTCCATCGCTCAGCTCATTGACGTGGATGAGA...CCACGGCACCCAGGCACCAGGGCTGGCCAAAGCCAGGTCCCTCAGCGTCCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR TCA 90 bp AGCAGGCGTGGCACGATGTCCAGGAAGACCCTGCGTACCCAGGTGGGCATGGTGGCCGGCAATTGTCCTTaGCCACGGACGGCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: SRRGTMSRKTLRTQVGMVAGNCP*PRTAAS
Trigger: TGAAGCGGCCGTCCGTGGTCAAGGACAATTGCCGGC...CACCATGCCCACCTGGGTACGCAGGGTCTTCCTGGACATCGTGCCACGCCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR TCA 90 bp ACGGCATCCACGATGACCCACTCGCCACTCTCCCAGAAGTCCAGCTGGTCCACGGAGCTGGTCGGAGGGTaGCTTGCAGGAAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TASTMTHSPLSQKSSWSTELVGG*LAGRPR
Trigger: CCTGGGCCTTCCTGCAAGTCACCCTCCGACCAGCTC...CGTGGACCAGCTGGACTTCTGGGAGAGTGGCGAGTGGGTCATCGTGGATGCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR TCA 90 bp CGGCATCGTCTCGGGGAACACAGTACTGGATGCTCCGAGACCGGCACCGGACGCACATGTGCTGGACGCTaGGGGACCTGGCTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: RHRLGEHSTGCSETGTGRTCAGR*GTWLWP
Trigger: TGGCCAAAGCCAGGTCCCTCAGCGTCCAGCACATGT...GCGTCCGGTGCCGGTCTCGGAGCATCCAGTACTGTGTTCCCCGAGACGATGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR GCA 90 bp CGCTTTGGTGCTGCGGGTCTTGACCGTGGCGCTCGGGGACACCGAAGAGGGCTCTGGTCCACGCGGCTGTaGATGTTCACCAGGTCGATC +
Preference number: 4 (lower is better)
Translates to: RFGAAGLDRGARGHRRGLWSTRL*MFTRSI
Trigger: GATCGACCTGGTGAACATGCACAGCCGCGTGGACCA...GAGCCCTCTTCGGTGTCCCCGAGCGCCACGGTCAAGACCCGCAGCACCAAAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR GCA 90 bp CCACAGTCCAACTGGAAGCAGCTCCACACTCGGTCTCCCCAGAGGCCGTGTCCCCCAGGGCTGGACATGTaGTGGACGCTGAGGGACCTG +
Preference number: 4 (lower is better)
Translates to: PQSNWKQLHTRSPQRPCPPGLDM*WTLRDL
Trigger: CAGGTCCCTCAGCGTCCAGCACATGTCCAGCCCTGG...GGGACACGGCCTCTGGGGAGACCGAGTGTGGAGCTGCTTCCAGTTGGACTGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp GTCTGCAATGTACTGGACGCCCTCCACCGCCCGGGTCAGGGCCGGCGACAGGGGTCTTGCATGTGCATTTaGACGGAGAGGGCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: VCNVLDALHRPGQGRRQGSCMCI*TERAGL
Trigger: CAGACCAGCCCTCTCCGTGCAAATGCACATGCAAGA...CCCCTGTCGCCGGCCCTGACCCGGGCGGTGGAGGGCGTCCAGTACATTGCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR GCA 90 bp TGCCAGAGCCCTGGCCCTACGCCTGGAAGGCAGAGTCCTGGTCTCCAGACTCGCTCTGCTCCAAGCCACTaGCTCCTGAGGCCACAGTCC +
Preference number: 4 (lower is better)
Translates to: CQSPGPTPGRQSPGLQTRSAPSH*LLRPQS
Trigger: GGACTGTGGCCTCAGGAGGCAGTGGCTTGGAGCAGA...GCGAGTCTGGAGACCAGGACTCTGCCTTCCAGGCGTAGGGCCAGGGCTCTGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp TGCCCCCACCAGCTCCCCACAGCTACTGTAGCAGGAAGTCCTTCTTCCCGAACCGTGCTGAGCTCTGCCTaGCCTGCCAGGACGGAGGGC +
Preference number: 4 (lower is better)
Translates to: CPHQLPTATVAGSPSSRTVLSSA*PARTEG
Trigger: GCCCTCCGTCCTGGCAGGGCAGGCAGAGCTCAGCAC...GGTTCGGGAAGAAGGACTTCCTGCTACAGTAGCTGTGGGGAGCTGGTGGGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp CAAGGGCCCCTTGGGGCGGTCGGGACCATCACCAGATCTGCTGAGAGACTGGGACCTCTGGATACCGCCTaGAGGGGTGAGGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: QGPLGAVGTITRSAERLGPLDTA*RGEAVL
Trigger: CAGCACAGCCTCACCCCTGCAGGCGGTATCCAGAGG...TCCCAGTCTCTCAGCAGATCTGGTGATGGTCCCGACCGCCCCAAGGGGCCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp GGTCTCCCCAGAGGCCGTGTCCCCGTCCAAGGCCGTCTTACAGCAGACACAGAAGGGTGGGGCAGCCTGTaGCCATCCCAAGGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: GLPRGRVPVQGRLTADTEGWGSL*PSQGEV
Trigger: CACTTCCCCTTGGGATGGGCACAGGCTGCCCCACCC...TTCTGTGTCTGCTGTAAGACGGCCTTGGACGGGGACACGGCCTCTGGGGAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp AGCAGGCGTGGCACGATGTCCAGGAAGACCCTGCGTACCCAGGTGGGCATGGTGCCACGTCCGAGATGTTaGCCACGGGTCGGGACCACT +
Preference number: 4 (lower is better)
Translates to: SRRGTMSRKTLRTQVGMVPRPRC*PRVGTT
Trigger: AGTGGTCCCGACCCGTGGCCAACATCTCGGACGTGG...CACCATGCCCACCTGGGTACGCAGGGTCTTCCTGGACATCGTGCCACGCCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp CGGCATCGTCTCGGGGAACACAGTACTGGATGCTCCGAGACCGGCACCGGACGCCCGTCATGGAACAGGTaGGCCTTGGTCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: RHRLGEHSTGCSETGTGRPSWNR*ALVRWV
Trigger: CACCCACCTGACCAAGGCCCACCTGTTCCATGACGG...GCGTCCGGTGCCGGTCTCGGAGCATCCAGTACTGTGTTCCCCGAGACGATGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp AGCAGGCGTGGCACGATGTCCAGGAAGACCCTGCGTACCCAGGTGGGCATGGTGTGCACCCGCCCGTCATaGAACAGGTGGGCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: SRRGTMSRKTLRTQVGMVCTRPS*NRWALV
Trigger: GACCAAGGCCCACCTGTTCCATGACGGGCGGGTGCA...CACCATGCCCACCTGGGTACGCAGGGTCTTCCTGGACATCGTGCCACGCCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp CGGCATCGTCTCGGGGAACACAGTACTGGATGCTCCGAGACCGGCACCGGACGCTCCCAGAAGTCCAGCTaGTCCACGCGGCTGTGCATG +
Preference number: 4 (lower is better)
Translates to: RHRLGEHSTGCSETGTGRSQKSS*STRLCM
Trigger: CATGCACAGCCGCGTGGACCAGCTGGACTTCTGGGA...GCGTCCGGTGCCGGTCTCGGAGCATCCAGTACTGTGTTCCCCGAGACGATGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp GCATCCACGATGACCCACTCGCCACTCTCCCAGAAGTCCAGCTGGTCCACGCGGTGGTCTGCAATGTACTaGACGCCCTCCACCGCCCGG +
Preference number: 4 (lower is better)
Translates to: ASTMTHSPLSQKSSWSTRWSAMY*TPSTAR
Trigger: CCGGGCGGTGGAGGGCGTCCAGTACATTGCAGACCA...CCGCGTGGACCAGCTGGACTTCTGGGAGAGTGGCGAGTGGGTCATCGTGGATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp CATCTTATGCATGGACTCGATGAGCCGCCGGCAATTGTCCTTGACCACGGACGGCCCAGGCCGGCCGCATaGATGCTGGCCCCGTGCACG +
Preference number: 4 (lower is better)
Translates to: HLMHGLDEPPAIVLDHGRPRPAA*MLAPCT
Trigger: CGTGCACGGGGCCAGCATCCATGCGGCCGGCCTGGG...CCGTCCGTGGTCAAGGACAATTGCCGGCGGCTCATCGAGTCCATGCATAAGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp CCTGCCCCGAGGGTCCCAGCATCTCCCAGGTGGAGGTCCTCAAGGATGCCCCCAAGGCCACAGTCCAACTaGAAGCAGCTCCACACTCGG +
Preference number: 4 (lower is better)
Translates to: PAPRVPASPRWRSSRMPPRPQSN*KQLHTR
Trigger: CCGAGTGTGGAGCTGCTTCCAGTTGGACTGTGGCCT...TGGGGGCATCCTTGAGGACCTCCACCTGGGAGATGCTGGGACCCTCGGGGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp GAGCACATTCCAGGGCTTGGCAGACATTGCCTGCAGAAGCCGGGCGGCCGCACCTGTCCCACCCACTCCTaGCACAAAAGCCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: EHIPGLGRHCLQKPGGRTCPTHS*HKSPSL
Trigger: GAGGCTGGGGCTTTTGTGCCAGGAGTGGGTGGGACA...GGTGCGGCCGCCCGGCTTCTGCAGGCAATGTCTGCCAAGCCCTGGAATGTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp GGGCCACGTCGCCCCAGGCCGGGCCACACGGGAAGCACCCAGGCCGGTCCGGAGTCCACTTATGCAATGTaGATCGGGCTTCTTACATCT +
Preference number: 4 (lower is better)
Translates to: GPRRPRPGHTGSTQAGPESTYAM*IGLLTS
Trigger: AGATGTAAGAAGCCCGATCCACATTGCATAAGTGGA...CTCCGGACCGGCCTGGGTGCTTCCCGTGTGGCCCGGCCTGGGGCGACGTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp CTTCAGGTGGTCTGCAATGTACTGGACGCCCTCCACCGCCCGGGTCAGGGCCGGTCTCATCCACGTCAATaGGCTGAGCGATGGACAGGC +
Preference number: 4 (lower is better)
Translates to: LQVVCNVLDALHRPGQGRSHPRQ*AERWTG
Trigger: GCCTGTCCATCGCTCAGCTCATTGACGTGGATGAGA...CCGGCCCTGACCCGGGCGGTGGAGGGCGTCCAGTACATTGCAGACCACCTGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR TCA 90 bp TGCCCCCACCAGCTCCCCACAGCTACTGTAGCAGGAAGTCCTTCTTCCCGAACCGACACAGAAGGACGGTaGGGGCGGGTGCAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: CPHQLPTATVAGSPSSRTDTEGR*GRVQAL
Trigger: CAGAGCCTGCACCCGCCCTCACCGTCCTTCTGTGTC...GGTTCGGGAAGAAGGACTTCCTGCTACAGTAGCTGTGGGGAGCTGGTGGGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp GCCCACGGCATCCACGATGACCCACTCGCCACTCTCCCAGAAGTCCAGCTGGTCACATGTGCTGGACGCTaGGGGACCTGGCTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: AHGIHDDPLATLPEVQLVTCAGR*GTWLWP
Trigger: TGGCCAAAGCCAGGTCCCTCAGCGTCCAGCACATGT...GACCAGCTGGACTTCTGGGAGAGTGGCGAGTGGGTCATCGTGGATGCCGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR GCA 90 bp GGGGGTCACAGCCCTGGCAAGGTGGGTTCTAGGCAAGCTGTCCACCCCCGGGAATGGTCCACGCGGCTGTaGATGTTCACCAGGTCGATC +
Preference number: 4 (lower is better)
Translates to: GGHSPGKVGSRQAVHPREWSTRL*MFTRSI
Trigger: GATCGACCTGGTGAACATGCACAGCCGCGTGGACCA...TTCCCGGGGGTGGACAGCTTGCCTAGAACCCACCTTGCCAGGGCTGTGACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp GCACTGGCCATCTTATGCATGGACTCGATGAGCCGCCGGCAATTGTCCTTGACCGGTGCAGGCTCTGGGTaGCGCTCGTGGCAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: ALAILCMDSMSRRQLSLTGAGSG*RSWQGA
Trigger: AGCCCCCTGCCACGAGCGGCACCCAGAGCCTGCACC...GGTCAAGGACAATTGCCGGCGGCTCATCGAGTCCATGCATAAGATGGCCAGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR GCA 90 bp ATGACCCACTCGCCACTCTCCCAGAAGTCCAGCTGGTCCACGCGGCTGTGCATGCCAGGGCTGGACATGTaGTGGACGCTGAGGGACCTG +
Preference number: 4 (lower is better)
Translates to: MTHSPLSQKSSWSTRLCMPGLDM*WTLRDL
Trigger: CAGGTCCCTCAGCGTCCAGCACATGTCCAGCCCTGG...CATGCACAGCCGCGTGGACCAGCTGGACTTCTGGGAGAGTGGCGAGTGGGTCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR GCA 90 bp TCTCGGGGAACACAGTACTGGATGCTCCGAGACCGGCACCGGACGCCGCCTTCCGAACACAGTACTGGATaGTCCGAGACCGGCACCGGA +
Preference number: 4 (lower is better)
Translates to: SRGTQYWMLRDRHRTPPSEHSTG*SETGTG
Trigger: TCCGGTGCCGGTCTCGGAGCATCCAGTACTGTGTTC...GGAAGGCGGCGTCCGGTGCCGGTCTCGGAGCATCCAGTACTGTGTTCCCCGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR GCA 90 bp CACCGAGAAGTCTGTGTCTTCGGCCTTCAGGTGGTCTGCAATGTACTGGACGCCCAGCCGAGTGGGTGTTaGGAGAGGCCAGGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: HREVCVFGLQVVCNVLDAQPSGC*ERPGRR
Trigger: CCGGCGCCCTGGCCTCTCGCAACACCCACTCGGCTG...GGCGTCCAGTACATTGCAGACCACCTGAAGGCCGAAGACACAGACTTCTCGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR GCA 90 bp ATTTGGCAAACGTGTGGCCCCACAGAGTCCAGGGAGAAGCCAGCCCGGCCCCAGTTCTCAGGGACTTCCTaGCCCGAGGGTCCCAGCATC +
Preference number: 4 (lower is better)
Translates to: IWQTCGPTESREKPARPQFSGTS*PEGPSI
Trigger: GATGCTGGGACCCTCGGGGCAGGAAGTCCCTGAGAA...CTGGGGCCGGGCTGGCTTCTCCCTGGACTCTGTGGGGCCACACGTTTGCCAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp TGCCAGAGCCCTGGCCCTACGCCTGGAAGGCAGAGTCCTGGTCTCCAGACTCGCCGGGCTCCAGGGTCATaGCTGGAAACATTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: CQSPGPTPGRQSPGLQTRRAPGS*LETFQA
Trigger: GGCCTGAAATGTTTCCAGGCATGACCCTGGAGCCCG...GCGAGTCTGGAGACCAGGACTCTGCCTTCCAGGCGTAGGGCCAGGGCTCTGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp CCACAGTCCAACTGGAAGCAGCTCCACACTCGGTCTCCCCAGAGGCCGTGTCCCCGGGGAACACAGTACTaGATGCTCCGAGACCGGCAC +
Preference number: 4 (lower is better)
Translates to: PQSNWKQLHTRSPQRPCPRGTQY*MLRDRH
Trigger: GTGCCGGTCTCGGAGCATCCAGTACTGTGTTCCCCG...GGGACACGGCCTCTGGGGAGACCGAGTGTGGAGCTGCTTCCAGTTGGACTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp TCCCCTTCTGGCTCGGGCCAGAAGCGCGGGGCACTGGCCATCTTATGCATGGACCGGGGAACACAGTACTaGATGCTCCGAGACCGGCAC +
Preference number: 4 (lower is better)
Translates to: SPSGSGQKRGALAILCMDRGTQY*MLRDRH
Trigger: GTGCCGGTCTCGGAGCATCCAGTACTGTGTTCCCCG...GTCCATGCATAAGATGGCCAGTGCCCCGCGCTTCTGGCCCGAGCCAGAAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp TGCTGGACGCTGAGGGACCTGGCTTTGGCCAGCCCTGGTGCCTGGGTGCCGTGGTCTTCGGCCTTCAGGTaGTCTGCAATGTACTGGACG +
Preference number: 4 (lower is better)
Translates to: CWTLRDLALASPGAWVPWSSAFR*SAMYWT
Trigger: CGTCCAGTACATTGCAGACCACCTGAAGGCCGAAGA...CCACGGCACCCAGGCACCAGGGCTGGCCAAAGCCAGGTCCCTCAGCGTCCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp CCGGCAGGAGGGTCCCCCGGCAGGAGCGTCCCAGCCACTCCGCAGTCACTCCTGACAGGAAGGAAAATTTaGCAAACGTGTGGCCCCACA +
Preference number: 4 (lower is better)
Translates to: PAGGSPGRSVPATPQSLLTGRKI*QTCGPT
Trigger: TGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGT...CAGGAGTGACTGCGGAGTGGCTGGGACGCTCCTGCCGGGGGACCCTCCTGCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp GGATGCTCCGAGACCGGCACCGGACGCCGCCTTCCACCGCTTCGCCAGGGCTGGACAGGAAGGAAAATTTaGCAAACGTGTGGCCCCACA +
Preference number: 4 (lower is better)
Translates to: GCSETGTGRRLPPLRQGWTGRKI*QTCGPT
Trigger: TGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGT...CCAGCCCTGGCGAAGCGGTGGAAGGCGGCGTCCGGTGCCGGTCTCGGAGCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp GAACCAGGGCCCAGGTCTGGACTCCATTCGGGACCTTCCCAGCTCCGGGGAATCACCAGGGCCCAGGTCTaGACTCCATTCGGGACCTTC +
Preference number: 4 (lower is better)
Translates to: EPGPRSGLHSGPSQLRGITRAQV*TPFGTF
Trigger: GAAGGTCCCGAATGGAGTCCAGACCTGGGCCCTGGT...GATTCCCCGGAGCTGGGAAGGTCCCGAATGGAGTCCAGACCTGGGCCCTGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp GGCATCGTCTCGGGGAACACAGTACTGGATGCTCCGAGACCGGCACCGGACGCCTATGCATGGACTCGATaGGCCGCCGGCAATTGTCCT +
Preference number: 4 (lower is better)
Translates to: GIVSGNTVLDAPRPAPDAYAWTR*AAGNCP
Trigger: AGGACAATTGCCGGCGGCTCATCGAGTCCATGCATA...GGCGTCCGGTGCCGGTCTCGGAGCATCCAGTACTGTGTTCCCCGAGACGATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR TCA 90 bp CTTCCAGTCCTCCTTCACCGAGAAGTCTGTGTCTTCGGCCTTCAGGTGGTCTGCTGGTGCTGCGGGTCTTaGCCGTGGCGCTCGGGGACA +
Preference number: 4 (lower is better)
Translates to: LPVLLHREVCVFGLQVVCWCCGS*PWRSGT
Trigger: TGTCCCCGAGCGCCACGGTCAAGACCCGCAGCACCA...GCAGACCACCTGAAGGCCGAAGACACAGACTTCTCGGTGAAGGAGGACTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR TCA 90 bp AGGCGTGGCACGATGTCCAGGAAGACCCTGCGTACCCAGGTGGGCATGGTGTGCGGAAGATGCGGTCGATaGCCATGGCCACGTACTTCC +
Preference number: 4 (lower is better)
Translates to: RRGTMSRKTLRTQVGMVCGRCGR*PWPRTS
Trigger: GGAAGTACGTGGCCATGGTCATCGACCGCATCTTCC...GCACACCATGCCCACCTGGGTACGCAGGGTCTTCCTGGACATCGTGCCACGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR TCA 90 bp AGCAGGCGTGGCACGATGTCCAGGAAGACCCTGCGTACCCAGGTGGGCATGGTGGGAAGATGCGGTCGATaGCCATGGCCACGTACTTCC +
Preference number: 4 (lower is better)
Translates to: SRRGTMSRKTLRTQVGMVGRCGR*PWPRTS
Trigger: GGAAGTACGTGGCCATGGTCATCGACCGCATCTTCC...CACCATGCCCACCTGGGTACGCAGGGTCTTCCTGGACATCGTGCCACGCCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR TCA 90 bp TGCCAGGACGGAGGGCATGGGCCTGTGTGGAAACCCCAGGGCTCCCTGACTCCCAGCTCAGGAGACTCTTaGACTGGACTTAGCCCGAGT +
Preference number: 4 (lower is better)
Translates to: CQDGGHGPVWKPQGSLTPSSGDS*TGLSPS
Trigger: ACTCGGGCTAAGTCCAGTTCAAGAGTCTCCTGAGCT...GGGAGTCAGGGAGCCCTGGGGTTTCCACACAGGCCCATGCCCTCCGTCCTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp CCGGCAGGAGGGTCCCCCGGCAGGAGCGTCCCAGCCACTCCGCAGTCACTCCTGCTTAGGCACAAGACTTaGGTTCTCACTAACTTACCC +
Preference number: 4 (lower is better)
Translates to: PAGGSPGRSVPATPQSLLLRHKT*VLTNLP
Trigger: GGGTAAGTTAGTGAGAACTCAAGTCTTGTGCCTAAG...CAGGAGTGACTGCGGAGTGGCTGGGACGCTCCTGCCGGGGGACCCTCCTGCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp GGGGGTCACAGCCCTGGCAAGGTGGGTTCTAGGCAAGCTGTCCACCCCCGGGAACTGACTGTCTCCTCCTaGACCGATGTCACTCACAGG +
Preference number: 4 (lower is better)
Translates to: GGHSPGKVGSRQAVHPRELTVSS*TDVTHR
Trigger: CCTGTGAGTGACATCGGTTCAGGAGGAGACAGTCAG...TTCCCGGGGGTGGACAGCTTGCCTAGAACCCACCTTGCCAGGGCTGTGACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp GATGGGGAGGGACGCCGACAGGAAGGGCTGGAGGGACCTTCTAGGGGCTGGGTCCTCCGCAGTCACTCCTaGCCCAGAAAAGAACAACCA +
Preference number: 4 (lower is better)
Translates to: DGEGRRQEGLEGPSRGWVLRSHS*PRKEQP
Trigger: TGGTTGTTCTTTTCTGGGTCAGGAGTGACTGCGGAG...GACCCAGCCCCTAGAAGGTCCCTCCAGCCCTTCCTGTCGGCGTCCCTCCCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp CAAGGGCCCCTTGGGGCGGTCGGGACCATCACCAGATCTGCTGAGAGACTGGGAGGGCTGGGTCTCCACTaGAGAGCATGCATCTCACCA +
Preference number: 4 (lower is better)
Translates to: QGPLGAVGTITRSAERLGGLGLH*RACISP
Trigger: TGGTGAGATGCATGCTCTTCAGTGGAGACCCAGCCC...TCCCAGTCTCTCAGCAGATCTGGTGATGGTCCCGACCGCCCCAAGGGGCCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp CCACAGTCCAACTGGAAGCAGCTCCACACTCGGTCTCCCCAGAGGCCGTGTCCCACTTACAAGGGAGCCTaGGTGACAACTCCGGAGGCC +
Preference number: 4 (lower is better)
Translates to: PQSNWKQLHTRSPQRPCPTYKGA*VTTPEA
Trigger: GGCCTCCGGAGTTGTCACTCAGGCTCCCTTGTAAGT...GGGACACGGCCTCTGGGGAGACCGAGTGTGGAGCTGCTTCCAGTTGGACTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp CCGGCAGGAGGGTCCCCCGGCAGGAGCGTCCCAGCCACTCCGCAGTCACTCCTGATTTCTGGTGCAAGGTaGAAGGACTCAGCCACTTTA +
Preference number: 4 (lower is better)
Translates to: PAGGSPGRSVPATPQSLLISGAR*KDSATL
Trigger: TAAAGTGGCTGAGTCCTTTCACCTTGCACCAGAAAT...CAGGAGTGACTGCGGAGTGGCTGGGACGCTCCTGCCGGGGGACCCTCCTGCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp GTCTCGGGGAACACAGTACTGGATGCTCCGAGACCGGCACCGGACGCCGCCTTCGCACTGGCCATCTTATaGATGGACTCGATGAGCCGC +
Preference number: 4 (lower is better)
Translates to: VSGNTVLDAPRPAPDAAFALAIL*MDSMSR
Trigger: GCGGCTCATCGAGTCCATGCATAAGATGGCCAGTGC...GAAGGCGGCGTCCGGTGCCGGTCTCGGAGCATCCAGTACTGTGTTCCCCGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR GCA 90 bp CCACAGTCCAACTGGAAGCAGCTCCACACTCGGTCTCCCCAGAGGCCGTGTCCCCTGGGGCACTCGGCATaGCGGGTTCCTAACCTCAAT +
Preference number: 4 (lower is better)
Translates to: PQSNWKQLHTRSPQRPCPLGHSA*RVPNLN
Trigger: ATTGAGGTTAGGAACCCGGCATGCCGAGTGCCCCAG...GGGACACGGCCTCTGGGGAGACCGAGTGTGGAGCTGCTTCCAGTTGGACTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp TGTCTCCTCCTGAACCGATGTCACTCACAGGCAGGGGACACGCCATCCTGGCCCTCCCAGAAGTCCAGCTaGTCCACGCGGCTGTGCATG +
Preference number: 4 (lower is better)
Translates to: CLLLNRCHSQAGDTPSWPSQKSS*STRLCM
Trigger: CATGCACAGCCGCGTGGACCAGCTGGACTTCTGGGA...GGGCCAGGATGGCGTGTCCCCTGCCTGTGAGTGACATCGGTTCAGGAGGAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp CTTCCAGTCCTCCTTCACCGAGAAGTCTGTGTCTTCGGCCTTCAGGTGGTCTGCTCTGGGTGCCGCTCGTaGCAGGGGGCTCCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: LPVLLHREVCVFGLQVVCSGCRS*QGAPLL
Trigger: CAGAAGGGGAGCCCCCTGCCACGAGCGGCACCCAGA...GCAGACCACCTGAAGGCCGAAGACACAGACTTCTCGGTGAAGGAGGACTGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp GCTTTGGTGCTGCGGGTCTTGACCGTGGCGCTCGGGGACACCGAAGAGGGCTCCTCTTCGGCCTTCAGGTaGTCTGCAATGTACTGGACG +
Preference number: 4 (lower is better)
Translates to: ALVLRVLTVALGDTEEGSSSAFR*SAMYWT
Trigger: CGTCCAGTACATTGCAGACCACCTGAAGGCCGAAGA...GGAGCCCTCTTCGGTGTCCCCGAGCGCCACGGTCAAGACCCGCAGCACCAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp GGCCTTCAGGTGGTCTGCAATGTACTGGACGCCCTCCACCGCCCGGGTCAGGGCAATTTGGCAAACGTGTaGCCCCACAGAGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: GLQVVCNVLDALHRPGQGNLANV*PHRVQG
Trigger: TCCCTGGACTCTGTGGGGCCACACGTTTGCCAAATT...GCCCTGACCCGGGCGGTGGAGGGCGTCCAGTACATTGCAGACCACCTGAAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp TGTCTCCTCCTGAACCGATGTCACTCACAGGCAGGGGACACGCCATCCTGGCCCCCAGCATCTCCCAGGTaGAGGTCCTCAAGGATGCCC +
Preference number: 4 (lower is better)
Translates to: CLLLNRCHSQAGDTPSWPPASPR*RSSRMP
Trigger: GGGCATCCTTGAGGACCTCCACCTGGGAGATGCTGG...GGGCCAGGATGGCGTGTCCCCTGCCTGTGAGTGACATCGGTTCAGGAGGAGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp GCTGGTCCCGCGTGGGCCTCCCGATTCTCCCCACGCGGAACCAGCTCCACAAAACTCCAGGGTCATGCCTaGAAACATTTCAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: AGPAWASRFSPRGTSSTKLQGHA*KHFRPP
Trigger: GGGAGGCCTGAAATGTTTCCAGGCATGACCCTGGAG...TTTTGTGGAGCTGGTTCCGCGTGGGGAGAATCGGGAGGCCCACGCGGGACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp GGTCTCCCCAGAGGCCGTGTCCCCGTCCAAGGCCGTCTTACAGCAGACACAGAAGGGATGCCCAGGATTTaGCACGGGGGTCTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: GLPRGRVPVQGRLTADTEGMPRI*HGGLCV
Trigger: GACACAGAGACCCCCGTGCCAAATCCTGGGCATCCC...TTCTGTGTCTGCTGTAAGACGGCCTTGGACGGGGACACGGCCTCTGGGGAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp GGGGGTCACAGCCCTGGCAAGGTGGGTTCTAGGCAAGCTGTCCACCCCCGGGAATCAGAGCTCAGCAGATaGGGTCCTGAATACACGGGG +
Preference number: 4 (lower is better)
Translates to: GGHSPGKVGSRQAVHPRESELSR*GPEYTG
Trigger: CCCCGTGTATTCAGGACCCCATCTGCTGAGCTCTGA...TTCCCGGGGGTGGACAGCTTGCCTAGAACCCACCTTGCCAGGGCTGTGACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp AGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCCTCGCGGGCTCTAGATaGGGGCGGCTCCCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SRHRTGRKIWQTCGPTESLAGSR*GRLPAP
Trigger: GGGAGCCGGGAGCCGCCCGCATCTAGAGCCCGCGAG...GGACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370263.9
ENST00000627000.1
CDS-3UTR GCA 90 bp GAGCACATTCCAGGGCTTGGCAGACATTGCCTGCAGAAGCCGGGCGGCCGCACCTCTTGCATGTGCATTTaGACGGAGAGGGCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: EHIPGLGRHCLQKPGGRTSCMCI*TERAGL
Trigger: CAGACCAGCCCTCTCCGTGCAAATGCACATGCAAGA...GGTGCGGCCGCCCGGCTTCTGCAGGCAATGTCTGCCAAGCCCTGGAATGTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp GGTCTCCCCAGAGGCCGTGTCCCCGTCCAAGGCCGTCTTACAGCAGACACAGAAGGCCTTCAGGTGGTCTaGAATGTACTGGACGCCCTC +
Preference number: 4 (lower is better)
Translates to: GLPRGRVPVQGRLTADTEGLQVV*NVLDAL
Trigger: GAGGGCGTCCAGTACATTGCAGACCACCTGAAGGCC...TTCTGTGTCTGCTGTAAGACGGCCTTGGACGGGGACACGGCCTCTGGGGAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp TGCCCCCACCAGCTCCCCACAGCTACTGTAGCAGGAAGTCCTTCTTCCCGAACCATCCGAAGCCGCCTCTaGTCCAGGGGACACCTAACC +
Preference number: 4 (lower is better)
Translates to: CPHQLPTATVAGSPSSRTIRSRL*SRGHLT
Trigger: GGTTAGGTGTCCCCTGGAGCAGAGGCGGCTTCGGAT...GGTTCGGGAAGAAGGACTTCCTGCTACAGTAGCTGTGGGGAGCTGGTGGGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp TGGTCGGAGGGTGACTTGCAGGAAGGCCCAGGCTCAGCCGGCACATCCAGGGGGCCAAAAGGGCTCTCCTaGAGTTGTTGTAGAGGACGA +
Preference number: 4 (lower is better)
Translates to: WSEGDLQEGPGSAGTSRGPKGLS*SCCRGR
Trigger: TCGTCCTCTACAACAACTGCAGGAGAGCCCTTTTGG...CCCCCTGGATGTGCCGGCTGAGCCTGGGCCTTCCTGCAAGTCACCCTCCGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498043.6
CDS-3UTR CCA 90 bp CTTCCAGTCCTCCTTCACCGAGAAGTCTGTGTCTTCGGCCTTCAGGTGGTCTGCCCCTGCGTACCCAGGTaGGCATGGTGTGCGTGCGTG +
Preference number: 4 (lower is better)
Translates to: LPVLLHREVCVFGLQVVCPCVPR*AWCACV
Trigger: CACGCACGCACACCATGCCCACCTGGGTACGCAGGG...GCAGACCACCTGAAGGCCGAAGACACAGACTTCTCGGTGAAGGAGGACTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp ATGACCCACTCGCCACTCTCCCAGAAGTCCAGCTGGTCCACGCGGCTGTGCATGCATGAGGAGCAGGCGTaGCACGATGTCCAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: MTHSPLSQKSSWSTRLCMHEEQA*HDVQED
Trigger: GTCTTCCTGGACATCGTGCCACGCCTGCTCCTCATG...CATGCACAGCCGCGTGGACCAGCTGGACTTCTGGGAGAGTGGCGAGTGGGTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp CCACAGTCCAACTGGAAGCAGCTCCACACTCGGTCTCCCCAGAGGCCGTGTCCCAGAAGCGCGGGGCACTaGCCATCTTATGCATGGACT +
Preference number: 4 (lower is better)
Translates to: PQSNWKQLHTRSPQRPCPRSAGH*PSYAWT
Trigger: AGTCCATGCATAAGATGGCCAGTGCCCCGCGCTTCT...GGGACACGGCCTCTGGGGAGACCGAGTGTGGAGCTGCTTCCAGTTGGACTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp CATCTTATGCATGGACTCGATGAGCCGCCGGCAATTGTCCTTGACCACGGACGGGCGAGGGGTGGGGGCTaGCTTTCTCAGCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: HLMHGLDEPPAIVLDHGRARGGG*LSQLPG
Trigger: CCCTGGAAGCTGAGAAAGCCAGCCCCCACCCCTCGC...CCGTCCGTGGTCAAGGACAATTGCCGGCGGCTCATCGAGTCCATGCATAAGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp GGCGCTCGGGGACACCGAAGAGGGCTCCTTCTTGCATGTGCATTTGCACGGAGACGGGGAACACAGTACTaGATGCTCCGAGACCGGCAC +
Preference number: 4 (lower is better)
Translates to: GARGHRRGLLLACAFARRRGTQY*MLRDRH
Trigger: GTGCCGGTCTCGGAGCATCCAGTACTGTGTTCCCCG...TCTCCGTGCAAATGCACATGCAAGAAGGAGCCCTCTTCGGTGTCCCCGAGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp CAGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCGGCCGCATGGATGCTaGCCCCGTGCACGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: QQTQNRKENLANVWPHRVRPHGC*PRARQP
Trigger: GGGCTGCCGTGCACGGGGCCAGCATCCATGCGGCCG...GACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370263.9
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp AGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCCCCAGGCCGGCCGCATaGATGCTGGCCCCGTGCACG +
Preference number: 4 (lower is better)
Translates to: SRHRTGRKIWQTCGPTESPRPAA*MLAPCT
Trigger: CGTGCACGGGGCCAGCATCCATGCGGCCGGCCTGGG...GGACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000370263.9
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp TCTCGGGGAACACAGTACTGGATGCTCCGAGACCGGCACCGGACGCCGCCTTCCAATTTGGCAAACGTGTaGCCCCACAGAGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SRGTQYWMLRDRHRTPPSNLANV*PHRVQG
Trigger: TCCCTGGACTCTGTGGGGCCACACGTTTGCCAAATT...GGAAGGCGGCGTCCGGTGCCGGTCTCGGAGCATCCAGTACTGTGTTCCCCGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR TCA 90 bp TGTCTCCTCCTGAACCGATGTCACTCACAGGCAGGGGACACGCCATCCTGGCCCTCTCATCCACGTCAATaGGCTGAGCGATGGACAGGC +
Preference number: 4 (lower is better)
Translates to: CLLLNRCHSQAGDTPSWPSHPRQ*AERWTG
Trigger: GCCTGTCCATCGCTCAGCTCATTGACGTGGATGAGA...GGGCCAGGATGGCGTGTCCCCTGCCTGTGAGTGACATCGGTTCAGGAGGAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp ACACAGCGGCATTTCTGGGGCACTCGGCATGCCGGGTTCCTAACCTCAATTATTTGTCCGGCCGCCAGATaGGCTCGGAGGGGATGCGGA +
Preference number: 4 (lower is better)
Translates to: TQRHFWGTRHAGFLTSIICPAAR*ARRGCG
Trigger: TCCGCATCCCCTCCGAGCTCATCTGGCGGCCGGACA...AATAATTGAGGTTAGGAACCCGGCATGCCGAGTGCCCCAGAAATGCCGCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp GGTCTCCCCAGAGGCCGTGTCCCCGTCCAAGGCCGTCTTACAGCAGACACAGAATATGCATGGACTCGATaGGCCGCCGGCAATTGTCCT +
Preference number: 4 (lower is better)
Translates to: GLPRGRVPVQGRLTADTEYAWTR*AAGNCP
Trigger: AGGACAATTGCCGGCGGCTCATCGAGTCCATGCATA...TTCTGTGTCTGCTGTAAGACGGCCTTGGACGGGGACACGGCCTCTGGGGAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp ACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCAGGGAGGTGCAGGCTCTGGGTaGCGCTCGTGGCAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: TQNRKENLANVWPHRVQGGAGSG*RSWQGA
Trigger: AGCCCCCTGCCACGAGCGGCACCCAGAGCCTGCACC...TCCCTGGACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370263.9
ENST00000498043.6
ENST00000627000.1
CDS-3UTR GCA 90 bp CGGCATTTCTGGGGCACTCGGCATGCCGGGTTCCTAACCTCAATTATTCATTCTGACGGTGAGGGCGGGTaGAGGCTCTGGGTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: RHFWGTRHAGFLTSIIHSDGEGG*RLWVPL
Trigger: GAGCGGCACCCAGAGCCTGCACCCGCCCTCACCGTC...AGAATGAATAATTGAGGTTAGGAACCCGGCATGCCGAGTGCCCCAGAAATGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp CGGCATTTCTGGGGCACTCGGCATGCCGGGTTCCTAACCTCAATTATTCATTCTTTTGGCCAGCCCTGGTaGCTGGGTGCCGTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: RHFWGTRHAGFLTSIIHSFGQPW*LGAVGR
Trigger: CCGCCCCACGGCACCCAGGCACCAGGGCTGGCCAAA...AGAATGAATAATTGAGGTTAGGAACCCGGCATGCCGAGTGCCCCAGAAATGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp TGCCCCCACCAGCTCCCCACAGCTACTGTAGCAGGAAGTCCTTCTTCCCGAACCGAACACAGTACTGGATaGTCCGAGACCGGCACCGGA +
Preference number: 4 (lower is better)
Translates to: CPHQLPTATVAGSPSSRTEHSTG*SETGTG
Trigger: TCCGGTGCCGGTCTCGGAGCATCCAGTACTGTGTTC...GGTTCGGGAAGAAGGACTTCCTGCTACAGTAGCTGTGGGGAGCTGGTGGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp AGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCGCCCGGGTCTCCACATaGCTGCTGGCGCGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SRHRTGRKIWQTCGPTESARVST*LLARRR
Trigger: CCTCCTGCGCGCCAGCAGCCATGTGGAGACCCGGGC...GGACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370263.9
ENST00000627000.1
CDS-3UTR CCA 90 bp CAGGTGGTCTGCAATGTACTGGACGCCCTCCACCGCCCGGGTCAGGGCCGGCGATCACCCATACGTTCGTaGTCATCATCTGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: QVVCNVLDALHRPGQGRRSPIRS*SSSGSS
Trigger: AGAAGAACCAGATGATGACCACGAACGTATGGGTGA...TCGCCGGCCCTGACCCGGGCGGTGGAGGGCGTCCAGTACATTGCAGACCACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp GCTGGTCCCGCGTGGGCCTCCCGATTCTCCCCACGCGGAACCAGCTCCACAAAAATTCTCATAGTCAGCTaGGTCCCAGCGCAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: AGPAWASRFSPRGTSSTKILIVS*VPAQLV
Trigger: TACAAGCTGCGCTGGGACCCAGCTGACTATGAGAAT...TTTTGTGGAGCTGGTTCCGCGTGGGGAGAATCGGGAGGCCCACGCGGGACCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp CTGGACATGTGCTGGACGCTGAGGGACCTGGCTTTGGCCAGCCCTGGTGCCTGGATTCTCATAGTCAGCTaGGTCCCAGCGCAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: LDMCWTLRDLALASPGAWILIVS*VPAQLV
Trigger: TACAAGCTGCGCTGGGACCCAGCTGACTATGAGAAT...CCAGGCACCAGGGCTGGCCAAAGCCAGGTCCCTCAGCGTCCAGCACATGTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp CAGGCTCCCGGTCCCTTCCTAGATCATGCCAGCCAGCCAGGGCGGCAGGAAGAGATTCTCATAGTCAGCTaGGTCCCAGCGCAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: QAPGPFLDHASQPGRQEEILIVS*VPAQLV
Trigger: TACAAGCTGCGCTGGGACCCAGCTGACTATGAGAAT...CTCTTCCTGCCGCCCTGGCTGGCTGGCATGATCTAGGAAGGGACCGGGAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp CTTCCAGTCCTCCTTCACCGAGAAGTCTGTGTCTTCGGCCTTCAGGTGGTCTGCGGGCTGGACATGTGCTaGACGCTGAGGGACCTGGCT +
Preference number: 4 (lower is better)
Translates to: LPVLLHREVCVFGLQVVCGLDMC*TLRDLA
Trigger: AGCCAGGTCCCTCAGCGTCCAGCACATGTCCAGCCC...GCAGACCACCTGAAGGCCGAAGACACAGACTTCTCGGTGAAGGAGGACTGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp CAGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCGGAGGCAGAAGGGGCTaGGAAGCCCTGGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: QQTQNRKENLANVWPHRVGGRRG*EALARA
Trigger: GGCCCTGGCCAGGGCTTCCCAGCCCCTTCTGCCTCC...GACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp CCTGCCCCGAGGGTCCCAGCATCTCCCAGGTGGAGGTCCTCAAGGATGCCCCCACTGATCCAGCATTTCTaGTGCAAGGTGAAAGGACTC +
Preference number: 4 (lower is better)
Translates to: PAPRVPASPRWRSSRMPPLIQHF*CKVKGL
Trigger: GAGTCCTTTCACCTTGCACCAGAAATGCTGGATCAG...TGGGGGCATCCTTGAGGACCTCCACCTGGGAGATGCTGGGACCCTCGGGGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp GAACCAGGGCCCAGGTCTGGACTCCATTCGGGACCTTCCCAGCTCCGGGGAATCGCACATTCCAGGGCTTaGCAGACATTGCCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: EPGPRSGLHSGPSQLRGIAHSRA*QTLPAE
Trigger: TTCTGCAGGCAATGTCTGCCAAGCCCTGGAATGTGC...GATTCCCCGGAGCTGGGAAGGTCCCGAATGGAGTCCAGACCTGGGCCCTGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR CAA 72 bp GCCATCTTATGCATGGACTCGATGAGCCGCCGGCAATaGTCCTTGACCACGGACGGCCGCTTCATGAGGAGC +
Preference number: 4 (lower is better)
Translates to: AILCMDSMSRRQ*SLTTDGRFMRS
Trigger: GCTCCTCATGAAGCGGCCGTCCGTGGTCAAGGACAATTGCCGGCGGCTCATCGAGTCCATGCATAAGATGGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR TCA 90 bp AGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCCGGACGGCCGCTTCATaGGGAGCAGGCGTGGCACGA +
Preference number: 4 (lower is better)
Translates to: SRHRTGRKIWQTCGPTESRTAAS*GAGVAR
Trigger: TCGTGCCACGCCTGCTCCTCATGAAGCGGCCGTCCG...GGACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370263.9
ENST00000498043.6
ENST00000627000.1
CDS-3UTR TCA 90 bp ACACAGCGGCATTTCTGGGGCACTCGGCATGCCGGGTTCCTAACCTCAATTATTTACCGCCTGCAGGGGTaGGGCTGTGCTGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TQRHFWGTRHAGFLTSIIYRLQG*GCAELC
Trigger: GCAGAGCTCAGCACAGCCTCACCCCTGCAGGCGGTA...AATAATTGAGGTTAGGAACCCGGCATGCCGAGTGCCCCAGAAATGCCGCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp TGCCAGGACGGAGGGCATGGGCCTGTGTGGAAACCCCAGGGCTCCCTGACTCCCGTGCGTTTTATTCATTaGAGTCTGTGCACACACTGG +
Preference number: 4 (lower is better)
Translates to: CQDGGHGPVWKPQGSLTPVRFIH*SLCTHW
Trigger: CCAGTGTGTGCACAGACTTCAATGAATAAAACGCAC...GGGAGTCAGGGAGCCCTGGGGTTTCCACACAGGCCCATGCCCTCCGTCCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp CACCGAGAAGTCTGTGTCTTCGGCCTTCAGGTGGTCTGCAATGTACTGGACGCCCCGTCATGGAACAGGTaGGCCTTGGTCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: HREVCVFGLQVVCNVLDAPSWNR*ALVRWV
Trigger: CACCCACCTGACCAAGGCCCACCTGTTCCATGACGG...GGCGTCCAGTACATTGCAGACCACCTGAAGGCCGAAGACACAGACTTCTCGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp AGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCGAGGGGCCAGGGGGCTaGGGATGCCCAGGATTTGGC +
Preference number: 4 (lower is better)
Translates to: SRHRTGRKIWQTCGPTESEGPGG*GCPGFG
Trigger: GCCAAATCCTGGGCATCCCCAGCCCCCTGGCCCCTC...GGACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp TGCCCCCACCAGCTCCCCACAGCTACTGTAGCAGGAAGTCCTTCTTCCCGAACCGGATGCGGATGGAGGTaGCATTCTCATAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: CPHQLPTATVAGSPSSRTGCGWR*HSHSQL
Trigger: CAGCTGACTATGAGAATGTCACCTCCATCCGCATCC...GGTTCGGGAAGAAGGACTTCCTGCTACAGTAGCTGTGGGGAGCTGGTGGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp TGCCAGAGCCCTGGCCCTACGCCTGGAAGGCAGAGTCCTGGTCTCCAGACTCGCAAGTCCACTAACAGGTaGTGGACAAACTGCGTCTTA +
Preference number: 4 (lower is better)
Translates to: CQSPGPTPGRQSPGLQTRKSTNR*WTNCVL
Trigger: TAAGACGCAGTTTGTCCATCACCTGTTAGTGGACTT...GCGAGTCTGGAGACCAGGACTCTGCCTTCCAGGCGTAGGGCCAGGGCTCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp GAAGTCTGTGTCTTCGGCCTTCAGGTGGTCTGCAATGTACTGGACGCCCTCCACTGGTCCACGCGGCTGTaGATGTTCACCAGGTCGATC +
Preference number: 4 (lower is better)
Translates to: EVCVFGLQVVCNVLDALHWSTRL*MFTRSI
Trigger: GATCGACCTGGTGAACATGCACAGCCGCGTGGACCA...GTGGAGGGCGTCCAGTACATTGCAGACCACCTGAAGGCCGAAGACACAGACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR GCA 90 bp ACACAGCGGCATTTCTGGGGCACTCGGCATGCCGGGTTCCTAACCTCAATTATTTTGGCAGACATTGCCTaGAGAAGCCGGGCGGCCGCA +
Preference number: 4 (lower is better)
Translates to: TQRHFWGTRHAGFLTSIILADIA*RSRAAA
Trigger: TGCGGCCGCCCGGCTTCTGCAGGCAATGTCTGCCAA...AATAATTGAGGTTAGGAACCCGGCATGCCGAGTGCCCCAGAAATGCCGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp GAAGTCTGTGTCTTCGGCCTTCAGGTGGTCTGCAATGTACTGGACGCCCTCCACGGCGAAAAGCACTCCTaGCCAAAAGGGCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: EVCVFGLQVVCNVLDALHGEKHS*PKGLSC
Trigger: GCAGGAGAGCCCTTTTGGGCAGGAGTGCTTTTCGCC...GTGGAGGGCGTCCAGTACATTGCAGACCACCTGAAGGCCGAAGACACAGACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498043.6
CDS-3UTR CCA 90 bp AGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCGGGAGCTCAGCCGAGTaGGTGTTGCGAGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SRHRTGRKIWQTCGPTESGSSAE*VLREAR
Trigger: CCTGGCCTCTCGCAACACCCACTCGGCTGAGCTCCC...GGACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370263.9
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp TACTTCCAGTCCTCCTTCACCGAGAAGTCTGTGTCTTCGGCCTTCAGGTGGTCTTTGCACGGAGAGGGCTaGTCTGGGGGTGGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: YFQSSFTEKSVSSAFRWSLHGEG*SGGGSS
Trigger: TGAGCTCCCACCCCCAGACCAGCCCTCTCCGTGCAA...AGACCACCTGAAGGCCGAAGACACAGACTTCTCGGTGAAGGAGGACTGGAAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp AGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCCCTTCAAGGGCCCCTTaGGGCGGTCGGGACCATCAC +
Preference number: 4 (lower is better)
Translates to: SRHRTGRKIWQTCGPTESPSRAP*GGRDHH
Trigger: GTGATGGTCCCGACCGCCCCAAGGGGCCCTTGAAGG...GGACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp ACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCAGGGAGGCTGCGCGCCAAGGTaGAAACCCTCAGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: TQNRKENLANVWPHRVQGGCAPR*KPSGSW
Trigger: CCAGGACCCTGAGGGTTTCCACCTTGGCGCGCAGCC...TCCCTGGACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp ACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCAGGGAGGCCTCCCTCACCTCTaGATACCGCCTGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: TQNRKENLANVWPHRVQGGLPHL*IPPAGV
Trigger: CACCCCTGCAGGCGGTATCCAGAGGTGAGGGAGGCC...TCCCTGGACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp ACACAGCGGCATTTCTGGGGCACTCGGCATGCCGGGTTCCTAACCTCAATTATTAAGAACAACCACAGCTaGGCCCAGCACCCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: TQRHFWGTRHAGFLTSIIKNNHS*AQHPGP
Trigger: TGGCCCGGGGTGCTGGGCCCAGCTGTGGTTGTTCTT...AATAATTGAGGTTAGGAACCCGGCATGCCGAGTGCCCCAGAAATGCCGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp ACCACGCTTCCTGAGAGGAGGGCCACGTCGCCCCAGGCCGGGCCACACGGGAAGGTTAATTTGGCGTGGTaGGAATATGGTGCTTTATTT +
Preference number: 4 (lower is better)
Translates to: TTLPERRATSPQAGPHGKVNLAW*EYGALF
Trigger: AAATAAAGCACCATATTCCCACCACGCCAAATTAAC...CTTCCCGTGTGGCCCGGCCTGGGGCGACGTGGCCCTCCTCTCAGGAAGCGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp CGGCATTTCTGGGGCACTCGGCATGCCGGGTTCCTAACCTCAATTATTCATTCTTGGGCAATGTGGGCCTaGGTCTCCTCCCCACTCACG +
Preference number: 4 (lower is better)
Translates to: RHFWGTRHAGFLTSIIHSWAMWA*VSSPLT
Trigger: CGTGAGTGGGGAGGAGACTCAGGCCCACATTGCCCA...AGAATGAATAATTGAGGTTAGGAACCCGGCATGCCGAGTGCCCCAGAAATGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp GAACCAGGGCCCAGGTCTGGACTCCATTCGGGACCTTCCCAGCTCCGGGGAATCTCACCCATACGTTCGTaGTCATCATCTGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: EPGPRSGLHSGPSQLRGISPIRS*SSSGSS
Trigger: AGAAGAACCAGATGATGACCACGAACGTATGGGTGA...GATTCCCCGGAGCTGGGAAGGTCCCGAATGGAGTCCAGACCTGGGCCCTGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp AGGCGTGGCACGATGTCCAGGAAGACCCTGCGTACCCAGGTGGGCATGGTGTGCTCACCCATACGTTCGTaGTCATCATCTGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RRGTMSRKTLRTQVGMVCSPIRS*SSSGSS
Trigger: AGAAGAACCAGATGATGACCACGAACGTATGGGTGA...GCACACCATGCCCACCTGGGTACGCAGGGTCTTCCTGGACATCGTGCCACGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp AGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCTGCACCCGCCCGTCATaGAACAGGTGGGCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: SRHRTGRKIWQTCGPTESCTRPS*NRWALV
Trigger: GACCAAGGCCCACCTGTTCCATGACGGGCGGGTGCA...GGACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370263.9
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp ACTGGCCATCTTATGCATGGACTCGATGAGCCGCCGGCAATTGTCCTTGACCACCATGAGGAGCAGGCGTaGCACGATGTCCAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: TGHLMHGLDEPPAIVLDHHEEQA*HDVQED
Trigger: GTCTTCCTGGACATCGTGCCACGCCTGCTCCTCATG...GTGGTCAAGGACAATTGCCGGCGGCTCATCGAGTCCATGCATAAGATGGCCAGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp AGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCTTGCACGGAGAGGGCTaGTCTGGGGGTGGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SRHRTGRKIWQTCGPTESLHGEG*SGGGSS
Trigger: TGAGCTCCCACCCCCAGACCAGCCCTCTCCGTGCAA...GGACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370263.9
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp AGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCTGGTCTGCAATGTACTaGACGCCCTCCACCGCCCGG +
Preference number: 4 (lower is better)
Translates to: SRHRTGRKIWQTCGPTESWSAMY*TPSTAR
Trigger: CCGGGCGGTGGAGGGCGTCCAGTACATTGCAGACCA...GGACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370263.9
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp CAGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCACACAGCGGCATTTCTaGGGCACTCGGCATGCCGGG +
Preference number: 4 (lower is better)
Translates to: QQTQNRKENLANVWPHRVTQRHF*GTRHAG
Trigger: CCCGGCATGCCGAGTGCCCCAGAAATGCCGCTGTGT...GACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp CAGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCAGCAGATGGGGTCCTaGATACACGGGGGATGTGGG +
Preference number: 4 (lower is better)
Translates to: QQTQNRKENLANVWPHRVQQMGS*IHGGCG
Trigger: CCCACATCCCCCGTGTATTCAGGACCCCATCTGCTG...GACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp CGGCATTTCTGGGGCACTCGGCATGCCGGGTTCCTAACCTCAATTATTCATTCTAGCAGATTGGAGCGCTaGTGGCTCACCCTCATGGGG +
Preference number: 4 (lower is better)
Translates to: RHFWGTRHAGFLTSIIHSSRLER*WLTLMG
Trigger: CCCCATGAGGGTGAGCCAGCAGCGCTCCAATCTGCT...AGAATGAATAATTGAGGTTAGGAACCCGGCATGCCGAGTGCCCCAGAAATGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp ACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCAGGGAGGGGGCAGCAGAATGTaGACCACTCAGCAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: TQNRKENLANVWPHRVQGGGSRM*TTQQEA
Trigger: AGCCTCCTGCTGAGTGGTCCACATTCTGCTGCCCCC...TCCCTGGACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp AGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCTCCTGCCAGCTTCCATaGCCCCGGGATGACCTCACT +
Preference number: 4 (lower is better)
Translates to: SRHRTGRKIWQTCGPTESSCQLP*PRDDLT
Trigger: AGTGAGGTCATCCCGGGGCCATGGAAGCTGGCAGGA...GGACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp GAGCACATTCCAGGGCTTGGCAGACATTGCCTGCAGAAGCCGGGCGGCCGCACCGGCGTGGTGGGAATATaGTGCTTTATTTGGATTTTT +
Preference number: 4 (lower is better)
Translates to: EHIPGLGRHCLQKPGGRTGVVGI*CFIWIF
Trigger: AAAAATCCAAATAAAGCACCATATTCCCACCACGCC...GGTGCGGCCGCCCGGCTTCTGCAGGCAATGTCTGCCAAGCCCTGGAATGTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp AGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCAGTCAGAGCCACAGATaGGGAGGGACGCCGACAGGA +
Preference number: 4 (lower is better)
Translates to: SRHRTGRKIWQTCGPTESSQSHR*GGTPTG
Trigger: TCCTGTCGGCGTCCCTCCCCATCTGTGGCTCTGACT...GGACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp ACACAGCGGCATTTCTGGGGCACTCGGCATGCCGGGTTCCTAACCTCAATTATTAGCTGCCCACACATCTaGCAGCTGGGTCCACTTATG +
Preference number: 4 (lower is better)
Translates to: TQRHFWGTRHAGFLTSIISCPHI*QLGPLM
Trigger: CATAAGTGGACCCAGCTGCCAGATGTGTGGGCAGCT...AATAATTGAGGTTAGGAACCCGGCATGCCGAGTGCCCCAGAAATGCCGCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp CAAGGGCCCCTTGGGGCGGTCGGGACCATCACCAGATCTGCTGAGAGACTGGGAAAGGTTAATTTGGCGTaGTGGGAATATGGTGCTTTA +
Preference number: 4 (lower is better)
Translates to: QGPLGAVGTITRSAERLGKVNLA*WEYGAL
Trigger: TAAAGCACCATATTCCCACCACGCCAAATTAACCTT...TCCCAGTCTCTCAGCAGATCTGGTGATGGTCCCGACCGCCCCAAGGGGCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp AGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCTCTCTATCCCTCCTCTaGGACCAGTGTCTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SRHRTGRKIWQTCGPTESSLSLL*DQCLLP
Trigger: TGGCAGGAGACACTGGTCTCAGAGGAGGGATAGAGA...GGACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR TCA 90 bp CAGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCCAACTGCAGGATTCTaGCTCCTCGAAGGTCGTGAG +
Preference number: 4 (lower is better)
Translates to: QQTQNRKENLANVWPHRVPTAGF*LLEGRE
Trigger: CTCACGACCTTCGAGGAGTCAGAATCCTGCAGTTGG...GACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp ACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCAGGGAGGAGTGAGTTCCATCTaGAGGGGAGCTCAGGAGACT +
Preference number: 4 (lower is better)
Translates to: TQNRKENLANVWPHRVQGGVSSI*RGAQET
Trigger: AGTCTCCTGAGCTCCCCTGCAGATGGAACTCACTCC...TCCCTGGACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp ATTTGGCAAACGTGTGGCCCCACAGAGTCCAGGGAGAAGCCAGCCCGGCCCCAGCAGACAGAAGAACACTaGTCACAATTAAAAACGAAG +
Preference number: 4 (lower is better)
Translates to: IWQTCGPTESREKPARPQQTEEH*SQLKTK
Trigger: CTTCGTTTTTAATTGTGAGCAGTGTTCTTCTGTCTG...CTGGGGCCGGGCTGGCTTCTCCCTGGACTCTGTGGGGCCACACGTTTGCCAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CCA 90 bp GAAGTCTGTGTCTTCGGCCTTCAGGTGGTCTGCAATGTACTGGACGCCCTCCACACAGGAAGGAAAATTTaGCAAACGTGTGGCCCCACA +
Preference number: 4 (lower is better)
Translates to: EVCVFGLQVVCNVLDALHTGRKI*QTCGPT
Trigger: TGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGT...GTGGAGGGCGTCCAGTACATTGCAGACCACCTGAAGGCCGAAGACACAGACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CCA 90 bp AGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCCCAGAAAGGCCAGGATaGGGTCTGATGGCGAAAAGC +
Preference number: 4 (lower is better)
Translates to: SRHRTGRKIWQTCGPTESPERPG*GLMAKS
Trigger: GCTTTTCGCCATCAGACCCCATCCTGGCCTTTCTGG...GGACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000498043.6
CDS-3UTR TCA 90 bp CGGCATTTCTGGGGCACTCGGCATGCCGGGTTCCTAACCTCAATTATTCATTCTCGGGCTTCTTACATCTaGAATCTGCGTCTCTATCCC +
Preference number: 4 (lower is better)
Translates to: RHFWGTRHAGFLTSIIHSRASYI*NLRLYP
Trigger: GGGATAGAGACGCAGATTTCAGATGTAAGAAGCCCG...AGAATGAATAATTGAGGTTAGGAACCCGGCATGCCGAGTGCCCCAGAAATGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp ACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCAGGGAAGCTGGGTCCACTTATaGAATGTGGATCGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: TQNRKENLANVWPHRVQGSWVHL*NVDRAS
Trigger: AGAAGCCCGATCCACATTGCATAAGTGGACCCAGCT...TCCCTGGACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR GCA 90 bp AGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCCTAATCACCGACAGCTaGAAGCAAAGTCCACTAACA +
Preference number: 4 (lower is better)
Translates to: SRHRTGRKIWQTCGPTESLITDS*KQSPLT
Trigger: TGTTAGTGGACTTTGCTTGCAGCTGTCGGTGATTAG...GGACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR CAA 72 bp ATAAAAACAGCACTGGACGCAAATACGCCAACATTGTaGTCAAGGTTAATTTGGCGTGGTGGGAATATGGTG +
Preference number: 4 (lower is better)
Translates to: IKTALDANTPTL*SRLIWRGGNMV
Trigger: CACCATATTCCCACCACGCCAAATTAACCTTGACAACAATGTTGGCGTATTTGCGTCCAGTGCTGTTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR CAA 72 bp GGACGCAAATACGCCAACATTGTTGTCAAGGTTAATTaGGCGTGGTGGGAATATGGTGCTTTATTTGGATTT +
Preference number: 4 (lower is better)
Translates to: GRKYANIVVKVN*AWWEYGALFGF
Trigger: AAATCCAAATAAAGCACCATATTCCCACCACGCCAAATTAACCTTGACAACAATGTTGGCGTATTTGCGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370263.9
3UTR CAA 72 bp TTAATAAAAACAGCACTGGACGCAAATACGCCAACATaGTTGTCAAGGTTAATTTGGCGTGGTGGGAATATG +
Preference number: 4 (lower is better)
Translates to: LIKTALDANTPT*LSRLIWRGGNM
Trigger: CATATTCCCACCACGCCAAATTAACCTTGACAACAATGTTGGCGTATTTGCGTCCAGTGCTGTTTTTATTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS GCA 90 bp CTCCCGGCTCCCCGCCGCTTCGAGGCCCGTGCGCGCCCAACTTCATaGCTCCCGCGCCTCGCGGGCCGCTTCGGCCGCCGGGCCCGGTTC +
Preference number: 5 (lower is better)
Translates to: LPAPRRFEARARPTS*LPRLAGRFGRRARF
Trigger: GAACCGGGCCCGGCGGCCGAAGCGGCCCGCGAGGCGCGGGAGGCATGAAGTTGGGCGCGCACGGGCCTCGAAGCGGCGGGGAGCCGGGAG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370263.9
ENST00000467563.3
ENST00000627000.1
ENST00000675470.1
CDS-3UTR CAA 90 bp GGGCCACGTCGCCCCAGGCCGGGCCACACGGGAAGCACCCAGGCCGGTCCGGAGCACGGTCGGCGGGGCTaGGTCCATGGGGCTGGCCGG +
Preference number: 5 (lower is better)
Translates to: GPRRPRPGHTGSTQAGPEHGRRG*VHGAGR
Trigger: CCGGCCAGCCCCATGGACCAAGCCCCGCCGACCGTG...CTCCGGACCGGCCTGGGTGCTTCCCGTGTGGCCCGGCCTGGGGCGACGTGGCCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CAA 90 bp GGGCCACGTCGCCCCAGGCCGGGCCACACGGGAAGCACCCAGGCCGGTCCGGAGTTGGTGCTGCGGGTCTaGACCGTGGCGCTCGGGGAC +
Preference number: 5 (lower is better)
Translates to: GPRRPRPGHTGSTQAGPELVLRV*TVALGD
Trigger: GTCCCCGAGCGCCACGGTCAAGACCCGCAGCACCAA...CTCCGGACCGGCCTGGGTGCTTCCCGTGTGGCCCGGCCTGGGGCGACGTGGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CAA 90 bp GGGAGAAGCCAGCCCGGCCCCAGGCCGGCCGCATGGATGCTGGCCCCGTGCACGTGCGGGGGCGGCGCTTaGGTGCTGCGGGTCTTGACC +
Preference number: 5 (lower is better)
Translates to: GRSQPGPRPAAWMLAPCTCGGGA*VLRVLT
Trigger: GGTCAAGACCCGCAGCACCAAAGCGCCGCCCCCGCA...CGTGCACGGGGCCAGCATCCATGCGGCCGGCCTGGGGCCGGGCTGGCTTCTCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370263.9
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CAA 90 bp GGGCCACGTCGCCCCAGGCCGGGCCACACGGGAAGCACCCAGGCCGGTCCGGAGTGGGGCTGGCCGGGCTaGCATCCCCAGGTGCTGTGT +
Preference number: 5 (lower is better)
Translates to: GPRRPRPGHTGSTQAGPEWGWPG*HPQVLC
Trigger: ACACAGCACCTGGGGATGCAAGCCCGGCCAGCCCCA...CTCCGGACCGGCCTGGGTGCTTCCCGTGTGGCCCGGCCTGGGGCGACGTGGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CAA 90 bp GGGAGAAGCCAGCCCGGCCCCAGGCCGGCCGCATGGATGCTGGCCCCGTGCACGTGGAACAGGTGGGCCTaGGTCAGGTGGGTGACCGCG +
Preference number: 5 (lower is better)
Translates to: GRSQPGPRPAAWMLAPCTWNRWA*VRWVTA
Trigger: CGCGGTCACCCACCTGACCAAGGCCCACCTGTTCCA...CGTGCACGGGGCCAGCATCCATGCGGCCGGCCTGGGGCCGGGCTGGCTTCTCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370263.9
ENST00000498043.6
ENST00000627000.1
CDS GCA 90 bp TGCGGGGAGAGTGGCTGCCAGCCGGGGCACCCAGACGTCCCTGCGTaGCCTGTGCTGGCGCAAGGCAGCTCTTCCGTGCCTCCGTGGTGC +
Preference number: 5 (lower is better)
Translates to: CGESGCQPGHPDVPA*PVLAQGSSSVPPWC
Trigger: GCACCACGGAGGCACGGAAGAGCTGCCTTGCGCCAGCACAGGGCACGCAGGGACGTCTGGGTGCCCCGGCTGGCAGCCACTCTCCCCGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS GCA 90 bp TGCCTGCGGGGAGAGTGGCTGCCAGCCGGGGCACCCAGACGTCCCTaGGTGCCCTGTGCTGGCGCAAGGCAGCTCTTCCGTGCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: CLRGEWLPAGAPRRP*VPCAGARQLFRASV
Trigger: CACGGAGGCACGGAAGAGCTGCCTTGCGCCAGCACAGGGCACGCAGGGACGTCTGGGTGCCCCGGCTGGCAGCCACTCTCCCCGCAGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS GCA 90 bp AGAGTGGCTGCCAGCCGGGGCACCCAGACGTCCCTGCGTGCCCTGTaGTGGCGCAAGGCAGCTCTTCCGTGCCTCCGTGGTGCCTGCGGT +
Preference number: 5 (lower is better)
Translates to: RVAASRGTQTSLRAL*WRKAALPCLRGACG
Trigger: ACCGCAGGCACCACGGAGGCACGGAAGAGCTGCCTTGCGCCAGCACAGGGCACGCAGGGACGTCTGGGTGCCCCGGCTGGCAGCCACTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS-3UTR CAA 90 bp GCTTTGGTGCTGCGGGTCTTGACCGTGGCGCTCGGGGACACCGAAGAGGGCTCCTGCGGGGGCGGCGCTTaGGTGCTGCGGGTCTTGACC +
Preference number: 5 (lower is better)
Translates to: ALVLRVLTVALGDTEEGSCGGGA*VLRVLT
Trigger: GGTCAAGACCCGCAGCACCAAAGCGCCGCCCCCGCA...GGAGCCCTCTTCGGTGTCCCCGAGCGCCACGGTCAAGACCCGCAGCACCAAAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS GCA 90 bp ACATCGCACACGGATACACTAGACCCTGCCTGCGGGGAGAGTGGCTaGCAGCCGGGGCACCCAGACGTCCCTGCGTGCCCTGTGCTGGCG +
Preference number: 5 (lower is better)
Translates to: TSHTDTLDPACGESG*QPGHPDVPACPVLA
Trigger: CGCCAGCACAGGGCACGCAGGGACGTCTGGGTGCCCCGGCTGGCAGCCACTCTCCCCGCAGGCAGGGTCTAGTGTATCCGTGTGCGATGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS-3UTR CAA 90 bp TGGATGCTCCGAGACCGGCACCGGACGCCGCCTTCCACCGCTTCGCCAGGGCTGATGAGCCGCCGGCAATaGTCCTTGACCACGGACGGC +
Preference number: 5 (lower is better)
Translates to: WMLRDRHRTPPSTASPGLMSRRQ*SLTTDG
Trigger: GCCGTCCGTGGTCAAGGACAATTGCCGGCGGCTCAT...CAGCCCTGGCGAAGCGGTGGAAGGCGGCGTCCGGTGCCGGTCTCGGAGCATCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CAA 90 bp CTTCAGGTGGTCTGCAATGTACTGGACGCCCTCCACCGCCCGGGTCAGGGCCGGTTGGTGCTGCGGGTCTaGACCGTGGCGCTCGGGGAC +
Preference number: 5 (lower is better)
Translates to: LQVVCNVLDALHRPGQGRLVLRV*TVALGD
Trigger: GTCCCCGAGCGCCACGGTCAAGACCCGCAGCACCAA...CCGGCCCTGACCCGGGCGGTGGAGGGCGTCCAGTACATTGCAGACCACCTGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS TCA 90 bp TGGAGGGCTCAGCACAGATGCCGCCATCCGTCCGCAGAATCGCGCTaGGAGCAGCTCCTTCAAGGGAGCCCGGGACGTCCCGGGGAAGCC +
Preference number: 5 (lower is better)
Translates to: WRAQHRCRHPSAESR*EQLLQGSPGRPGEA
Trigger: GGCTTCCCCGGGACGTCCCGGGCTCCCTTGAAGGAGCTGCTCTCAGCGCGATTCTGCGGACGGATGGCGGCATCTGTGCTGAGCCCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463705.5
ENST00000475033.5
CDS-3UTR CAA 90 bp TGCCAGGACGGAGGGCATGGGCCTGTGTGGAAACCCCAGGGCTCCCTGACTCCCCGCCGGCAATTGTCCTaGACCACGGACGGCCGCTTC +
Preference number: 5 (lower is better)
Translates to: CQDGGHGPVWKPQGSLTPRRQLS*TTDGRF
Trigger: GAAGCGGCCGTCCGTGGTCAAGGACAATTGCCGGCG...GGGAGTCAGGGAGCCCTGGGGTTTCCACACAGGCCCATGCCCTCCGTCCTGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CAA 90 bp GCTTTGGTGCTGCGGGTCTTGACCGTGGCGCTCGGGGACACCGAAGAGGGCTCCCGCCGGCAATTGTCCTaGACCACGGACGGCCGCTTC +
Preference number: 5 (lower is better)
Translates to: ALVLRVLTVALGDTEEGSRRQLS*TTDGRF
Trigger: GAAGCGGCCGTCCGTGGTCAAGGACAATTGCCGGCG...GGAGCCCTCTTCGGTGTCCCCGAGCGCCACGGTCAAGACCCGCAGCACCAAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CAA 90 bp CCTGCCCCGAGGGTCCCAGCATCTCCCAGGTGGAGGTCCTCAAGGATGCCCCCAAGGGCTTGGCAGACATaGCCTGCAGAAGCCGGGCGG +
Preference number: 5 (lower is better)
Translates to: PAPRVPASPRWRSSRMPPRAWQT*PAEAGR
Trigger: CCGCCCGGCTTCTGCAGGCAATGTCTGCCAAGCCCT...TGGGGGCATCCTTGAGGACCTCCACCTGGGAGATGCTGGGACCCTCGGGGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS GCA 90 bp GCCTGTTCAGAGACGTGGGCCGTCGCCCCTGCTCCTGCTGGAACGTaGAGCCCAGAGCCCCCACAAGCACCTCGTGCTGCCTCCCTCTTT +
Preference number: 5 (lower is better)
Translates to: ACSETWAVAPAPAGT*SPEPPQAPRAASLF
Trigger: AAAGAGGGAGGCAGCACGAGGTGCTTGTGGGGGCTCTGGGCTGCACGTTCCAGCAGGAGCAGGGGCGACGGCCCACGTCTCTGAACAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS-3UTR CAA 90 bp TCTCGGGGAACACAGTACTGGATGCTCCGAGACCGGCACCGGACGCCGCCTTCCACCACGTCCGAGATGTaGGCCACGGGTCGGGACCAC +
Preference number: 5 (lower is better)
Translates to: SRGTQYWMLRDRHRTPPSTTSEM*ATGRDH
Trigger: GTGGTCCCGACCCGTGGCCAACATCTCGGACGTGGT...GGAAGGCGGCGTCCGGTGCCGGTCTCGGAGCATCCAGTACTGTGTTCCCCGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CAA 90 bp GGGGGTCACAGCCCTGGCAAGGTGGGTTCTAGGCAAGCTGTCCACCCCCGGGAATGGAACAGGTGGGCCTaGGTCAGGTGGGTGACCGCG +
Preference number: 5 (lower is better)
Translates to: GGHSPGKVGSRQAVHPREWNRWA*VRWVTA
Trigger: CGCGGTCACCCACCTGACCAAGGCCCACCTGTTCCA...TTCCCGGGGGTGGACAGCTTGCCTAGAACCCACCTTGCCAGGGCTGTGACCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CAA 90 bp CCACAGTCCAACTGGAAGCAGCTCCACACTCGGTCTCCCCAGAGGCCGTGTCCCCTGAGGGACCTGGCTTaGGCCAGCCCTGGTGCCTGG +
Preference number: 5 (lower is better)
Translates to: PQSNWKQLHTRSPQRPCPLRDLA*ASPGAW
Trigger: CCAGGCACCAGGGCTGGCCAAAGCCAGGTCCCTCAG...GGGACACGGCCTCTGGGGAGACCGAGTGTGGAGCTGCTTCCAGTTGGACTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CAA 90 bp TCCCCTTCTGGCTCGGGCCAGAAGCGCGGGGCACTGGCCATCTTATGCATGGACTTGGTGCTGCGGGTCTaGACCGTGGCGCTCGGGGAC +
Preference number: 5 (lower is better)
Translates to: SPSGSGQKRGALAILCMDLVLRV*TVALGD
Trigger: GTCCCCGAGCGCCACGGTCAAGACCCGCAGCACCAA...GTCCATGCATAAGATGGCCAGTGCCCCGCGCTTCTGGCCCGAGCCAGAAGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS TCA 90 bp CCAGGAGAAGTGTGGCAGGGTTGGGCGCAGCCACCTATGAGCCCCTaGACCTCCCCAGGCCGTCGGATCTCACTTCAGAGTGGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: PGEVWQGWAQPPMSP*TSPGRRISLQSGLG
Trigger: GCCCAGGCCACTCTGAAGTGAGATCCGACGGCCTGGGGAGGTTCAGGGGCTCATAGGTGGCTGCGCCCAACCCTGCCACACTTCTCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS TCA 90 bp CCCACAGAGCAGCAGGTGCGTTGGAGGAGGGGCGCCTTGTGCGGCTaGATCTCGTGTGCAGGAGGAGAGGGCGAGGCTCTCTGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: PTEQQVRWRRGALCG*ISCAGGEGEALWFQ
Trigger: CTGGAACCAGAGAGCCTCGCCCTCTCCTCCTGCACACGAGATTCAGCCGCACAAGGCGCCCCTCCTCCAACGCACCTGCTGCTCTGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675470.1
CDS GCA 90 bp GCCAGGGTGGGCTCGGTCCAGCCTCGGCGCCTCCCCGGGTTCTGGTaGTCAGGCAGTTTCCTCCACCTACATGAGCCCCGACTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: ARVGSVQPRRLPGFW*SGSFLHLHEPRLSH
Trigger: ATGAGAAAGTCGGGGCTCATGTAGGTGGAGGAAACTGCCTGAGCACCAGAACCCGGGGAGGCGCCGAGGCTGGACCGAGCCCACCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463705.5
ENST00000475033.5
CDS GCA 90 bp GCACTGGGCAGGAAGAGAGCGAAGGGTGTGAGACCCCCACATCCATaGCCACGTCCACACCCACGCCCACTGCCACACCCATGCCCACGT +
Preference number: 5 (lower is better)
Translates to: ALGRKRAKGVRPPHP*PRPHPRPLPHPCPR
Trigger: ACGTGGGCATGGGTGTGGCAGTGGGCGTGGGTGTGGACGTGGGCATGGATGTGGGGGTCTCACACCCTTCGCTCTCTTCCTGCCCAGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000630240.1
CDS GCA 90 bp GGCGGGACTTACCGAGAAGTCTGTGTCTTCGGCCTTCAGGTGGTCTaGAATGTACTGGACGCCCTCCACCGCCCGGGTCAGGGCCGGCGA +
Preference number: 5 (lower is better)
Translates to: GGTYREVCVFGLQVV*NVLDALHRPGQGRR
Trigger: TCGCCGGCCCTGACCCGGGCGGTGGAGGGCGTCCAGTACATTGCAGACCACCTGAAGGCCGAAGACACAGACTTCTCGGTAAGTCCCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630240.1
CDS GCA 90 bp TCTGGTCTTGTTCCCCAGCGAGCCGTTCAGGACTCTCTGTCCGCCTaGAGCCCCCGCCTTCCCTGGTACCTCCGCAGAGACCCAAGAGGC +
Preference number: 5 (lower is better)
Translates to: SGLVPQRAVQDSLSA*SPRLPWYLRRDPRG
Trigger: GCCTCTTGGGTCTCTGCGGAGGTACCAGGGAAGGCGGGGGCTGCAGGCGGACAGAGAGTCCTGAACGGCTCGCTGGGGAACAAGACCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675470.1
CDS-3UTR CAA 90 bp TCCCCTTCTGGCTCGGGCCAGAAGCGCGGGGCACTGGCCATCTTATGCATGGACACCACGTCCGAGATGTaGGCCACGGGTCGGGACCAC +
Preference number: 5 (lower is better)
Translates to: SPSGSGQKRGALAILCMDTTSEM*ATGRDH
Trigger: GTGGTCCCGACCCGTGGCCAACATCTCGGACGTGGT...GTCCATGCATAAGATGGCCAGTGCCCCGCGCTTCTGGCCCGAGCCAGAAGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CAA 90 bp AGCAGGCGTGGCACGATGTCCAGGAAGACCCTGCGTACCCAGGTGGGCATGGTGCGCCGGCAATTGTCCTaGACCACGGACGGCCGCTTC +
Preference number: 5 (lower is better)
Translates to: SRRGTMSRKTLRTQVGMVRRQLS*TTDGRF
Trigger: GAAGCGGCCGTCCGTGGTCAAGGACAATTGCCGGCG...CACCATGCCCACCTGGGTACGCAGGGTCTTCCTGGACATCGTGCCACGCCTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CAA 90 bp GCTGGTCCCGCGTGGGCCTCCCGATTCTCCCCACGCGGAACCAGCTCCACAAAAATGAGCCGCCGGCAATaGTCCTTGACCACGGACGGC +
Preference number: 5 (lower is better)
Translates to: AGPAWASRFSPRGTSSTKMSRRQ*SLTTDG
Trigger: GCCGTCCGTGGTCAAGGACAATTGCCGGCGGCTCAT...TTTTGTGGAGCTGGTTCCGCGTGGGGAGAATCGGGAGGCCCACGCGGGACCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CAA 90 bp GGGCCACGTCGCCCCAGGCCGGGCCACACGGGAAGCACCCAGGCCGGTCCGGAGGGTGCGTTTTATTCATaGAAGTCTGTGCACACACTG +
Preference number: 5 (lower is better)
Translates to: GPRRPRPGHTGSTQAGPEGAFYS*KSVHTL
Trigger: CAGTGTGTGCACAGACTTCAATGAATAAAACGCACC...CTCCGGACCGGCCTGGGTGCTTCCCGTGTGGCCCGGCCTGGGGCGACGTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS GCA 90 bp TCCTGCTGGAACGTGCAGCCCAGAGCCCCCACAAGCACCTCGTGCTaGCTCCCTCTTTGTGATCCCCCAGCCCAGCCCTCAGTTGTACCC +
Preference number: 5 (lower is better)
Translates to: SCWNVQPRAPTSTSC*LPLCDPPAQPSVVP
Trigger: GGGTACAACTGAGGGCTGGGCTGGGGGATCACAAAGAGGGAGGCAGCACGAGGTGCTTGTGGGGGCTCTGGGCTGCACGTTCCAGCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS GCA 90 bp AAAGCCCAATCACAGACATCGCACACGGATACACTAGACCCTGCCTaGGGGGAGAGTGGCTGCCAGCCGGGGCACCCAGACGTCCCTGCG +
Preference number: 5 (lower is better)
Translates to: KAQSQTSHTDTLDPA*GESGCQPGHPDVPA
Trigger: CGCAGGGACGTCTGGGTGCCCCGGCTGGCAGCCACTCTCCCCGCAGGCAGGGTCTAGTGTATCCGTGTGCGATGTCTGTGATTGGGCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS GCA 90 bp GCACAAAGCCCAATCACAGACATCGCACACGGATACACTAGACCCTaGCTGCGGGGAGAGTGGCTGCCAGCCGGGGCACCCAGACGTCCC +
Preference number: 5 (lower is better)
Translates to: AQSPITDIAHGYTRP*LRGEWLPAGAPRRP
Trigger: GGGACGTCTGGGTGCCCCGGCTGGCAGCCACTCTCCCCGCAGGCAGGGTCTAGTGTATCCGTGTGCGATGTCTGTGATTGGGCTTTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS GCA 90 bp CACCTTTGCCCCAGTTCCCCGTCTCTTAAGCGCTCAACATGCGTCTaGCCCGTTCTCAGGGAGGCCTGGACCCTGTCCCAGCCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: HLCPSSPSLKRSTCV*PVLREAWTLSQPWW
Trigger: CCACCAGGGCTGGGACAGGGTCCAGGCCTCCCTGAGAACGGGGCAGACGCATGTTGAGCGCTTAAGAGACGGGGAACTGGGGCAAAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS-3UTR CAA 90 bp GGGGCACTGGCCATCTTATGCATGGACTCGATGAGCCGCCGGCAATTGTCCTTGTGCGGGGGCGGCGCTTaGGTGCTGCGGGTCTTGACC +
Preference number: 5 (lower is better)
Translates to: GALAILCMDSMSRRQLSLCGGGA*VLRVLT
Trigger: GGTCAAGACCCGCAGCACCAAAGCGCCGCCCCCGCA...CAAGGACAATTGCCGGCGGCTCATCGAGTCCATGCATAAGATGGCCAGTGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CAA 90 bp CCGGCAGGAGGGTCCCCCGGCAGGAGCGTCCCAGCCACTCCGCAGTCACTCCTGAACAGGAAGGAAAATTaGGCAAACGTGTGGCCCCAC +
Preference number: 5 (lower is better)
Translates to: PAGGSPGRSVPATPQSLLNRKEN*ANVWPH
Trigger: GTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTT...CAGGAGTGACTGCGGAGTGGCTGGGACGCTCCTGCCGGGGGACCCTCCTGCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CAA 90 bp ACGGTGAGGGCGGGTGCAGGCTCTGGGTGCCGCTCGTGGCAGGGGGCTCCCCTTAACAGGAAGGAAAATTaGGCAAACGTGTGGCCCCAC +
Preference number: 5 (lower is better)
Translates to: TVRAGAGSGCRSWQGAPLNRKEN*ANVWPH
Trigger: GTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTT...AAGGGGAGCCCCCTGCCACGAGCGGCACCCAGAGCCTGCACCCGCCCTCACCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS GCA 90 bp GAGCCAACGCAGCCACCAGCCAGGCCTCGGCTACCTGGGCAAGGCTaGCGGCTCATGAATATTCACGGCTCCGATGGTGTCTCTGAGCCT +
Preference number: 5 (lower is better)
Translates to: EPTQPPARPRLPGQG*RLMNIHGSDGVSEP
Trigger: AGGCTCAGAGACACCATCGGAGCCGTGAATATTCATGAGCCGGCAGCCTTGCCCAGGTAGCCGAGGCCTGGCTGGTGGCTGCGTTGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS CCA 90 bp CACCAGGGTCTGCTCCAAGGAACGGGGAGAATGGGCTTGTGGTGCTaGGGCCTTGTGTGGGGTGAGACGCTTCAGACCGGAAGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: HQGLLQGTGRMGLWC*GLVWGETLQTGRVG
Trigger: ACCCACCCTTCCGGTCTGAAGCGTCTCACCCCACACAAGGCCCCAGCACCACAAGCCCATTCTCCCCGTTCCTTGGAGCAGACCCTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS CCA 90 bp CAGCTCCTCTCCAAATCGTTCTCTTCCTCGCAGCAGATGGGGGTGTaGGGCGGCCTCGACCCTCCTCTGTGTCTGGGCTGTTGTGGCACC +
Preference number: 5 (lower is better)
Translates to: QLLSKSFSSSQQMGV*GGLDPPLCLGCCGT
Trigger: GGTGCCACAACAGCCCAGACACAGAGGAGGGTCGAGGCCGCCCCACACCCCCATCTGCTGCGAGGAAGAGAACGATTTGGAGAGGAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS-3UTR CAA 90 bp GGGGCACTGGCCATCTTATGCATGGACTCGATGAGCCGCCGGCAATTGTCCTTGCTGAGGGACCTGGCTTaGGCCAGCCCTGGTGCCTGG +
Preference number: 5 (lower is better)
Translates to: GALAILCMDSMSRRQLSLLRDLA*ASPGAW
Trigger: CCAGGCACCAGGGCTGGCCAAAGCCAGGTCCCTCAG...CAAGGACAATTGCCGGCGGCTCATCGAGTCCATGCATAAGATGGCCAGTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CAA 90 bp CCTGCCCCGAGGGTCCCAGCATCTCCCAGGTGGAGGTCCTCAAGGATGCCCCCAAGCACATTCCAGGGCTaGGCAGACATTGCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: PAPRVPASPRWRSSRMPPSTFQG*ADIACR
Trigger: TCTGCAGGCAATGTCTGCCAAGCCCTGGAATGTGCT...TGGGGGCATCCTTGAGGACCTCCACCTGGGAGATGCTGGGACCCTCGGGGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS GCA 90 bp GTGGGTGGCCTGGAGCTGCTCTGTCTCCAGGCACTGACCACAGCATaGACCTCTGATAGGTCCAGGAGAAGTGTGGCAGGGTTGGGCGCA +
Preference number: 5 (lower is better)
Translates to: VGGLELLCLQALTTA*TSDRSRRSVAGLGA
Trigger: TGCGCCCAACCCTGCCACACTTCTCCTGGACCTATCAGAGGTGCATGCTGTGGTCAGTGCCTGGAGACAGAGCAGCTCCAGGCCACCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS GCA 90 bp CCTCGACCCTCCTCTGTGTCTGGGCTGTTGTGGCACCAGCACCTTTaGCCCAGTTCCCCGTCTCTTAAGCGCTCAACATGCGTCTGCCCC +
Preference number: 5 (lower is better)
Translates to: PRPSSVSGLLWHQHL*PSSPSLKRSTCVCP
Trigger: GGGGCAGACGCATGTTGAGCGCTTAAGAGACGGGGAACTGGGGCAAAGGTGCTGGTGCCACAACAGCCCAGACACAGAGGAGGGTCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS TCA 90 bp AGACCGGAAGGGTGGGTGGCCTGGAGCTGCTCTGTCTCCAGGCACTaGCCACAGCATGCACCTCTGATAGGTCCAGGAGAAGTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: RPEGWVAWSCSVSRH*PQHAPLIGPGEVWQ
Trigger: CTGCCACACTTCTCCTGGACCTATCAGAGGTGCATGCTGTGGTCAGTGCCTGGAGACAGAGCAGCTCCAGGCCACCCACCCTTCCGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS TCA 90 bp AGCCACCAGCCAGGCCTCGGCTACCTGGGCAAGGCTGCCGGCTCATaGATATTCACGGCTCCGATGGTGTCTCTGAGCCTCCTAACCATC +
Preference number: 5 (lower is better)
Translates to: SHQPGLGYLGKAAGS*IFTAPMVSLSLLTI
Trigger: GATGGTTAGGAGGCTCAGAGACACCATCGGAGCCGTGAATATTCATGAGCCGGCAGCCTTGCCCAGGTAGCCGAGGCCTGGCTGGTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS GCA 90 bp CACATGGCTGCTGGCACAAAACCAGGCGGCGGATGGGCCGAGGACTaGTTTGGGTCTCCTGTCACACTGACTTCCAGGGAAGGGCTGTGT +
Preference number: 5 (lower is better)
Translates to: HMAAGTKPGGGWAED*FGSPVTLTSREGLC
Trigger: ACACAGCCCTTCCCTGGAAGTCAGTGTGACAGGAGACCCAAAGCAGTCCTCGGCCCATCCGCCGCCTGGTTTTGTGCCAGCAGCCATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637443.1
CDS CCA 90 bp AAAATGAGCGGAGCCAACGCAGCCACCAGCCAGGCCTCGGCTACCTaGGCAAGGCTGCCGGCTCATGAATATTCACGGCTCCGATGGTGT +
Preference number: 5 (lower is better)
Translates to: KMSGANAATSQASAT*ARLPAHEYSRLRWC
Trigger: ACACCATCGGAGCCGTGAATATTCATGAGCCGGCAGCCTTGCCCAGGTAGCCGAGGCCTGGCTGGTGGCTGCGTTGGCTCCGCTCATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS-3UTR CAA 90 bp GGCATCGTCTCGGGGAACACAGTACTGGATGCTCCGAGACCGGCACCGGACGCCGAAGAGGGCTCCTTCTaGCATGTGCATTTGCACGGA +
Preference number: 5 (lower is better)
Translates to: GIVSGNTVLDAPRPAPDAEEGSF*HVHLHG
Trigger: TCCGTGCAAATGCACATGCAAGAAGGAGCCCTCTTC...GGCGTCCGGTGCCGGTCTCGGAGCATCCAGTACTGTGTTCCCCGAGACGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS GCA 90 bp CCGGGGTGCGGGGCAGCCCTGCTTCCTTGGAACAAAGGCTGCACTTaGAGAAGTAGCTCAGACTTTCACCTGCTTCAAACCCTGGGCCGT +
Preference number: 5 (lower is better)
Translates to: PGCGAALLPWNKGCT*RSSSDFHLLQTLGR
Trigger: ACGGCCCAGGGTTTGAAGCAGGTGAAAGTCTGAGCTACTTCTGCAAGTGCAGCCTTTGTTCCAAGGAAGCAGGGCTGCCCCGCACCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS CCA 90 bp GAGCTCGGAGGGGATGCGGATGGAGGTGACATTCTCATAGTCAGCTaGGTCCCAGCGCAGCTTGTAGTCGTGCCACTCCTGCTTCACCCA +
Preference number: 5 (lower is better)
Translates to: ELGGDADGGDILIVS*VPAQLVVVPLLLHP
Trigger: TGGGTGAAGCAGGAGTGGCACGACTACAAGCTGCGCTGGGACCCAGCTGACTATGAGAATGTCACCTCCATCCGCATCCCCTCCGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370263.9
ENST00000467563.3
ENST00000498043.6
ENST00000628665.1
CDS CCA 90 bp GCTGCACTTGCAGAAGTAGCTCAGACTTTCACCTGCTTCAAACCCTaGGCCGTCTTCTGGTCTCAAGGCCAGGAGGCAGGGCCCACCGTC +
Preference number: 5 (lower is better)
Translates to: AALAEVAQTFTCFKP*AVFWSQGQEAGPTV
Trigger: GACGGTGGGCCCTGCCTCCTGGCCTTGAGACCAGAAGACGGCCCAGGGTTTGAAGCAGGTGAAAGTCTGAGCTACTTCTGCAAGTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS CCA 90 bp GAGCTCGGAGGGGATGCGGATGGAGGTGACATTCTCATAGTCAGCTaGGTCCCAGCGCAGCTTGTAGTCGTGCCACTCCTGGATGAGGTG +
Preference number: 5 (lower is better)
Translates to: ELGGDADGGDILIVS*VPAQLVVVPLLDEV
Trigger: CACCTCATCCAGGAGTGGCACGACTACAAGCTGCGCTGGGACCCAGCTGACTATGAGAATGTCACCTCCATCCGCATCCCCTCCGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627000.1
ENST00000627869.1
CDS-3UTR CAA 90 bp GAAGTCTGTGTCTTCGGCCTTCAGGTGGTCTGCAATGTACTGGACGCCCTCCACATGAGCCGCCGGCAATaGTCCTTGACCACGGACGGC +
Preference number: 5 (lower is better)
Translates to: EVCVFGLQVVCNVLDALHMSRRQ*SLTTDG
Trigger: GCCGTCCGTGGTCAAGGACAATTGCCGGCGGCTCAT...GTGGAGGGCGTCCAGTACATTGCAGACCACCTGAAGGCCGAAGACACAGACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CAA 90 bp TACTTCCAGTCCTCCTTCACCGAGAAGTCTGTGTCTTCGGCCTTCAGGTGGTCTCTGAGGGACCTGGCTTaGGCCAGCCCTGGTGCCTGG +
Preference number: 5 (lower is better)
Translates to: YFQSSFTEKSVSSAFRWSLRDLA*ASPGAW
Trigger: CCAGGCACCAGGGCTGGCCAAAGCCAGGTCCCTCAG...AGACCACCTGAAGGCCGAAGACACAGACTTCTCGGTGAAGGAGGACTGGAAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS-3UTR CAA 90 bp AGCAGGCGTGGCACGATGTCCAGGAAGACCCTGCGTACCCAGGTGGGCATGGTGGAAGAGGGCTCCTTCTaGCATGTGCATTTGCACGGA +
Preference number: 5 (lower is better)
Translates to: SRRGTMSRKTLRTQVGMVEEGSF*HVHLHG
Trigger: TCCGTGCAAATGCACATGCAAGAAGGAGCCCTCTTC...CACCATGCCCACCTGGGTACGCAGGGTCTTCCTGGACATCGTGCCACGCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS CCA 90 bp CCTTGGTGTCTTTCTCTGGCCCTAGGTTTCCTCATCTACAGCCACTaGCACAAGGACACGGCCAGGGCAAGATATGGTGGACGGGCGACC +
Preference number: 5 (lower is better)
Translates to: PWCLSLALGFLIYSH*HKDTARARYGGRAT
Trigger: GGTCGCCCGTCCACCATATCTTGCCCTGGCCGTGTCCTTGTGCCAGTGGCTGTAGATGAGGAAACCTAGGGCCAGAGAAAGACACCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636481.1
CDS-3UTR CAA 90 bp ACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCAGGGACCCTTCAAGGGCCCCTaGGGGCGGTCGGGACCATCA +
Preference number: 5 (lower is better)
Translates to: TQNRKENLANVWPHRVQGPFKGP*GRSGPS
Trigger: TGATGGTCCCGACCGCCCCAAGGGGCCCTTGAAGGG...TCCCTGGACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CAA 90 bp TGCCAGGACGGAGGGCATGGGCCTGTGTGGAAACCCCAGGGCTCCCTGACTCCCGTTGTCAAGGTTAATTaGGCGTGGTGGGAATATGGT +
Preference number: 5 (lower is better)
Translates to: CQDGGHGPVWKPQGSLTPVVKVN*AWWEYG
Trigger: ACCATATTCCCACCACGCCAAATTAACCTTGACAAC...GGGAGTCAGGGAGCCCTGGGGTTTCCACACAGGCCCATGCCCTCCGTCCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS TCA 90 bp AGGACCCATCCTCCTCACCTCAGGCTGGTCCTTTTCGCTCCCATGTaGAGGCACCATTGCCAGGCCAATGCTGGTCACTCTGTGATGACC +
Preference number: 5 (lower is better)
Translates to: RTHPPHLRLVLFAPM*RHHCQANAGHSVMT
Trigger: GGTCATCACAGAGTGACCAGCATTGGCCTGGCAATGGTGCCTTCACATGGGAGCGAAAAGGACCAGCCTGAGGTGAGGAGGATGGGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463705.5
ENST00000475033.5
CDS GCA 90 bp TGCACACCGGGGTGCGGGGCAGCCCTGCTTCCTTGGAACAAAGGCTaGACTTGCAGAAGTAGCTCAGACTTTCACCTGCTTCAAACCCTG +
Preference number: 5 (lower is better)
Translates to: CTPGCGAALLPWNKG*TCRSSSDFHLLQTL
Trigger: CAGGGTTTGAAGCAGGTGAAAGTCTGAGCTACTTCTGCAAGTGCAGCCTTTGTTCCAAGGAAGCAGGGCTGCCCCGCACCCCGGTGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463705.5
ENST00000475033.5
CDS-3UTR CAA 90 bp CGGCATTTCTGGGGCACTCGGCATGCCGGGTTCCTAACCTCAATTATTCATTCTACCACGTCCGAGATGTaGGCCACGGGTCGGGACCAC +
Preference number: 5 (lower is better)
Translates to: RHFWGTRHAGFLTSIIHSTTSEM*ATGRDH
Trigger: GTGGTCCCGACCCGTGGCCAACATCTCGGACGTGGT...AGAATGAATAATTGAGGTTAGGAACCCGGCATGCCGAGTGCCCCAGAAATGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS GCA 90 bp CTTGGAACAAAGGCTGCACTTGCAGAAGTAGCTCAGACTTTCACCTaGTTCAAACCCTGGGCCGTCTTCTGGTCTCAAGGCCAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: LGTKAALAEVAQTFT*FKPWAVFWSQGQEA
Trigger: TGCCTCCTGGCCTTGAGACCAGAAGACGGCCCAGGGTTTGAAGCAGGTGAAAGTCTGAGCTACTTCTGCAAGTGCAGCCTTTGTTCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS-3UTR CAA 90 bp CTTCCAGTCCTCCTTCACCGAGAAGTCTGTGTCTTCGGCCTTCAGGTGGTCTGCAACAGGAAGGAAAATTaGGCAAACGTGTGGCCCCAC +
Preference number: 5 (lower is better)
Translates to: LPVLLHREVCVFGLQVVCNRKEN*ANVWPH
Trigger: GTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTT...GCAGACCACCTGAAGGCCGAAGACACAGACTTCTCGGTGAAGGAGGACTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498043.6
ENST00000627000.1
CDS TCA 90 bp CCGGCTGTGAGCTGCCCGCAGCTGCCTGACCCTAATCTTCTCCAATaGAGTGGCTCTGAGAGGTTTTGTGGTCAGTATCAGTTCTGTCTT +
Preference number: 5 (lower is better)
Translates to: PAVSCPQLPDPNLLQ*SGSERFCGQYQFCL
Trigger: AAGACAGAACTGATACTGACCACAAAACCTCTCAGAGCCACTTCATTGGAGAAGATTAGGGTCAGGCAGCTGCGGGCAGCTCACAGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS TCA 90 bp GGAGGAACCCCGCTTTGGTTAAGGCTTAAAGGAGGCGCACGGGACTaGCTCTTCCTATGGAAAATCCTGCACAGGGAGATCAAATCCCAG +
Preference number: 5 (lower is better)
Translates to: GGTPLWLRLKGGARD*LFLWKILHREIKSQ
Trigger: CTGGGATTTGATCTCCCTGTGCAGGATTTTCCATAGGAAGAGTCAGTCCCGTGCGCCTCCTTTAAGCCTTAACCAAAGCGGGGTTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS-3UTR CAA 90 bp GGTCTCCCCAGAGGCCGTGTCCCCGTCCAAGGCCGTCTTACAGCAGACACAGAAAATACGCCAACATTGTaGTCAAGGTTAATTTGGCGT +
Preference number: 5 (lower is better)
Translates to: GLPRGRVPVQGRLTADTENTPTL*SRLIWR
Trigger: ACGCCAAATTAACCTTGACAACAATGTTGGCGTATT...TTCTGTGTCTGCTGTAAGACGGCCTTGGACGGGGACACGGCCTCTGGGGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS-3UTR CAA 90 bp AGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCCGAAGAGGGCTCCTTCTaGCATGTGCATTTGCACGGA +
Preference number: 5 (lower is better)
Translates to: SRHRTGRKIWQTCGPTESEEGSF*HVHLHG
Trigger: TCCGTGCAAATGCACATGCAAGAAGGAGCCCTCTTC...GGACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370263.9
ENST00000498043.6
ENST00000627000.1
CDS GCA 90 bp CCTGGTGGGGATAATTACCCTGACGCTCGTTTGCAGCGTTTAATTTaGTTCCTCCGCGCTGGAAGCCCACGTTTGGTGATGTATGTGTTA +
Preference number: 5 (lower is better)
Translates to: PGGDNYPDARLQRLI*FLRAGSPRLVMYVL
Trigger: TAACACATACATCACCAAACGTGGGCTTCCAGCGCGGAGGAAGCAAATTAAACGCTGCAAACGAGCGTCAGGGTAATTATCCCCACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS TCA 90 bp TCTGGAATTAAACCAACGAGCTTCCCCTCATGGGCTGCACTCACTTaGCTTTCAGCTCCTCTCCAAATCGTTCTCTTCCTCGCAGCAGAT +
Preference number: 5 (lower is better)
Translates to: SGIKPTSFPSWAALT*LSAPLQIVLFLAAD
Trigger: ATCTGCTGCGAGGAAGAGAACGATTTGGAGAGGAGCTGAAAGTCAAGTGAGTGCAGCCCATGAGGGGAAGCTCGTTGGTTTAATTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS-3UTR CAA 90 bp CAGCAGACACAGAACAGGAAGGAAAATTTGGCAAACGTGTGGCCCCACAGAGTCGCAAATACGCCAACATaGTTGTCAAGGTTAATTTGG +
Preference number: 5 (lower is better)
Translates to: QQTQNRKENLANVWPHRVANTPT*LSRLIW
Trigger: CCAAATTAACCTTGACAACAATGTTGGCGTATTTGC...GACTCTGTGGGGCCACACGTTTGCCAAATTTTCCTTCCTGTTCTGTGTCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370263.9
CDS CCA 72 bp GCAGCAGCCGCGGCGCTCCGGGGCCCCCTAGCTCCATaGCGCACGCACCTCGCGGGCTCTAGATGCGGGCGG +
Preference number: 6 (lower is better)
Translates to: AAAAALRGPLAP*RTHLAGSRCGR
Trigger: CCGCCCGCATCTAGAGCCCGCGAGGTGCGTGCGCCATGGAGCTAGGGGGCCCCGGAGCGCCGCGGCTGCTGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370263.9
ENST00000627000.1
ENST00000675470.1
CDS CCA 72 bp CCAGGGAGGGGCCCCGCCCTCAGGTGGGTGCCGAGGTaGCCGCCCACAGAGCAGCAGGTGCGTTGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: PGRGPALRWVPR*PPTEQQVRWRR
Trigger: CCTCCTCCAACGCACCTGCTGCTCTGTGGGCGGCCACCTCGGCACCCACCTGAGGGCGGGGCCCCTCCCTGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675470.1
CDS CCA 72 bp AGCCCAAGAGTCCAGGCCTGGGCCCTAGAGTCGCTCTaGCCCACGGGAGGGGCACACCCGGGTCCCGCCCAG +
Preference number: 6 (lower is better)
Translates to: SPRVQAWALESL*PTGGAHPGPAQ
Trigger: CTGGGCGGGACCCGGGTGTGCCCCTCCCGTGGGCCAGAGCGACTCTAGGGCCCAGGCCTGGACTCTTGGGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS CCA 72 bp GCGGCTTGGGACCGCAGTCAGGAGCCTGCCTCCCTCTaGCTCTGGGGGTCCCAGGCCATCCGAACGCGGGCG +
Preference number: 6 (lower is better)
Translates to: AAWDRSQEPASL*LWGSQAIRTRA
Trigger: CGCCCGCGTTCGGATGGCCTGGGACCCCCAGAGCCAGAGGGAGGCAGGCTCCTGACTGCGGTCCCAAGCCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628606.1
CDS GCA 72 bp GCCAGCCGGGGCACCCAGACGTCCCTGCGTGCCCTGTaGTGGCGCAAGGCAGCTCTTCCGTGCCTCCGTGGT +
Preference number: 6 (lower is better)
Translates to: ASRGTQTSLRAL*WRKAALPCLRG
Trigger: ACCACGGAGGCACGGAAGAGCTGCCTTGCGCCAGCACAGGGCACGCAGGGACGTCTGGGTGCCCCGGCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS CCA 72 bp AGCCCGGGACGTCCCGGGGAAGCCACCCTCAGTGACTaGCCCCAGACAAAGGCTGAACGGGCCGGGCTGGGC +
Preference number: 6 (lower is better)
Translates to: SPGRPGEATLSD*PQTKAERAGLG
Trigger: GCCCAGCCCGGCCCGTTCAGCCTTTGTCTGGGGCCAGTCACTGAGGGTGGCTTCCCCGGGACGTCCCGGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463705.5
ENST00000475033.5
CDS CCA 72 bp AGCCGGGGCACCCAGACGTCCCTGCGTGCCCTGTGCTaGCGCAAGGCAGCTCTTCCGTGCCTCCGTGGTGCC +
Preference number: 6 (lower is better)
Translates to: SRGTQTSLRALC*RKAALPCLRGA
Trigger: GGCACCACGGAGGCACGGAAGAGCTGCCTTGCGCCAGCACAGGGCACGCAGGGACGTCTGGGTGCCCCGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS GCA 72 bp GAGACGTGGGCCGTCGCCCCTGCTCCTGCTGGAACGTaGAGCCCAGAGCCCCCACAAGCACCTCGTGCTGCC +
Preference number: 6 (lower is better)
Translates to: ETWAVAPAPAGT*SPEPPQAPRAA
Trigger: GGCAGCACGAGGTGCTTGTGGGGGCTCTGGGCTGCACGTTCCAGCAGGAGCAGGGGCGACGGCCCACGTCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS GCA 72 bp CTGCGTGCCCTGTGCTGGCGCAAGGCAGCTCTTCCGTaGCTCCGTGGTGCCTGCGGTGAGGCTGCCTGGGAC +
Preference number: 6 (lower is better)
Translates to: LRALCWRKAALP*LRGACGEAAWD
Trigger: GTCCCAGGCAGCCTCACCGCAGGCACCACGGAGGCACGGAAGAGCTGCCTTGCGCCAGCACAGGGCACGCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS GCA 72 bp AGTGGCTGCCAGCCGGGGCACCCAGACGTCCCTGCGTaGCCTGTGCTGGCGCAAGGCAGCTCTTCCGTGCCT +
Preference number: 6 (lower is better)
Translates to: SGCQPGHPDVPA*PVLAQGSSSVP
Trigger: AGGCACGGAAGAGCTGCCTTGCGCCAGCACAGGGCACGCAGGGACGTCTGGGTGCCCCGGCTGGCAGCCACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS GCA 72 bp GGAGAGTGGCTGCCAGCCGGGGCACCCAGACGTCCCTaGGTGCCCTGTGCTGGCGCAAGGCAGCTCTTCCGT +
Preference number: 6 (lower is better)
Translates to: GEWLPAGAPRRP*VPCAGARQLFR
Trigger: ACGGAAGAGCTGCCTTGCGCCAGCACAGGGCACGCAGGGACGTCTGGGTGCCCCGGCTGGCAGCCACTCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS CCA 72 bp CGCCTGGCTCTCACCTGCAGCCCAAGAGTCCAGGCCTaGGCCCTAGAGTCGCTCTGGCCCACGGGAGGGGCA +
Preference number: 6 (lower is better)
Translates to: RLALTCSPRVQA*ALESLWPTGGA
Trigger: TGCCCCTCCCGTGGGCCAGAGCGACTCTAGGGCCCAGGCCTGGACTCTTGGGCTGCAGGTGAGAGCCAGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS CAA 90 bp GCCGGGGGAGTCCACTGCACCCGCCCGTCATGGAACAGGTGGGCCTaGGTCAGGTGGGTGACCGCGAAGTCCCCGTCAGCACTGGGCAGG +
Preference number: 6 (lower is better)
Translates to: AGGVHCTRPSWNRWA*VRWVTAKSPSALGR
Trigger: CCTGCCCAGTGCTGACGGGGACTTCGCGGTCACCCACCTGACCAAGGCCCACCTGTTCCATGACGGGCGGGTGCAGTGGACTCCCCCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630240.1
CDS CAA 90 bp GCCGGGGGAGTCCACTGCACCCGCCCGTCATGGAACAGGTGGGCCTaGGTCAGGTGGGTGACCGCGAAGTCCCCGTCAGCACCCTCTCCA +
Preference number: 6 (lower is better)
Translates to: AGGVHCTRPSWNRWA*VRWVTAKSPSAPSP
Trigger: TGGAGAGGGTGCTGACGGGGACTTCGCGGTCACCCACCTGACCAAGGCCCACCTGTTCCATGACGGGCGGGTGCAGTGGACTCCCCCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498043.6
CDS GCA 72 bp ACGGATACACTAGACCCTGCCTGCGGGGAGAGTGGCTaGCAGCCGGGGCACCCAGACGTCCCTGCGTGCCCT +
Preference number: 6 (lower is better)
Translates to: TDTLDPACGESG*QPGHPDVPACP
Trigger: AGGGCACGCAGGGACGTCTGGGTGCCCCGGCTGGCAGCCACTCTCCCCGCAGGCAGGGTCTAGTGTATCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS GCA 72 bp GGCTTCGTTCCTGGGGGCTGCATTCCTGGAGGGCTGTaGACAGGCACCCAGAGCGGCTTCTCTGCCCGGCCC +
Preference number: 6 (lower is better)
Translates to: GFVPGGCIPGGL*TGTQSGFSARP
Trigger: GGGCCGGGCAGAGAAGCCGCTCTGGGTGCCTGTGCACAGCCCTCCAGGAATGCAGCCCCCAGGAACGAAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636652.1
CDS CCA 72 bp CCGGAGAAGAGTTTCTTCAGGAGCCGCTCCTCGGCGTaGGCCCGGGTCTCCACATGGCTGCTGGCGCGCAGG +
Preference number: 6 (lower is better)
Translates to: PEKSFFRSRSSA*ARVSTWLLARR
Trigger: CCTGCGCGCCAGCAGCCATGTGGAGACCCGGGCCCACGCCGAGGAGCGGCTCCTGAAGAAACTCTTCTCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370263.9
ENST00000627000.1
ENST00000628665.1
ENST00000675470.1
CDS CCA 72 bp CGGCGGTCATGCTGGCCCGAGACAGGACGCCCCTCCTaGGGAGACGGAGCTCTGCAGACGGGAAAAGCCAGC +
Preference number: 6 (lower is better)
Translates to: RRSCWPETGRPS*GDGALQTGKAS
Trigger: GCTGGCTTTTCCCGTCTGCAGAGCTCCGTCTCCCCAGGAGGGGCGTCCTGTCTCGGGCCAGCATGACCGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463705.5
ENST00000475033.5
CDS CCA 72 bp CCGGAGAAGAGTTTCTTCAGGAGCCGCTCCTCGGCGTaGGCCCGGGTCTCCACATGGCTGCTGGCTCGCGGG +
Preference number: 6 (lower is better)
Translates to: PEKSFFRSRSSA*ARVSTWLLARG
Trigger: CCCGCGAGCCAGCAGCCATGTGGAGACCCGGGCCCACGCCGAGGAGCGGCTCCTGAAGAAACTCTTCTCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467563.3
CDS CCA 72 bp CCGGAGAAGAGTTTCTTCAGGAGCCGCTCCTCGGCGTaGGCCCGGGTCTCCACATGGCTGCTGGCTGCGGGG +
Preference number: 6 (lower is better)
Translates to: PEKSFFRSRSSA*ARVSTWLLAAG
Trigger: CCCCGCAGCCAGCAGCCATGTGGAGACCCGGGCCCACGCCGAGGAGCGGCTCCTGAAGAAACTCTTCTCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626188.1
CDS GCA 72 bp AGCCTGTTCAGAGACGTGGGCCGTCGCCCCTGCTCCTaGTGGAACGTGCAGCCCAGAGCCCCCACAAGCACC +
Preference number: 6 (lower is better)
Translates to: SLFRDVGRRPCS*WNVQPRAPTST
Trigger: GGTGCTTGTGGGGGCTCTGGGCTGCACGTTCCAGCAGGAGCAGGGGCGACGGCCCACGTCTCTGAACAGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS GCA 72 bp GTTCCCCAGCGAGCCGTTCAGGACTCTCTGTCCGCCTaGAGCCCCCGCCTTCCCTGGTACCTCCGCAGAGAC +
Preference number: 6 (lower is better)
Translates to: VPQRAVQDSLSA*SPRLPWYLRRD
Trigger: GTCTCTGCGGAGGTACCAGGGAAGGCGGGGGCTGCAGGCGGACAGAGAGTCCTGAACGGCTCGCTGGGGAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675470.1
CDS CCA 72 bp GGAGGCAGGGCCCACCGTCTGCTCCCTCCTGCTGGATaGAGCCTGGGGAAGCTGAGGATAATGGGGGCGTGG +
Preference number: 6 (lower is better)
Translates to: GGRAHRLLPPAG*SLGKLRIMGAW
Trigger: CCACGCCCCCATTATCCTCAGCTTCCCCAGGCTCCATCCAGCAGGAGGGAGCAGACGGTGGGCCCTGCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS CCA 72 bp CTGTTCAGAGACGTGGGCCGTCGCCCCTGCTCCTGCTaGAACGTGCAGCCCAGAGCCCCCACAAGCACCTCG +
Preference number: 6 (lower is better)
Translates to: LFRDVGRRPCSC*NVQPRAPTSTS
Trigger: CGAGGTGCTTGTGGGGGCTCTGGGCTGCACGTTCCAGCAGGAGCAGGGGCGACGGCCCACGTCTCTGAACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS CAA 90 bp CCCTCTCACGGGACAGGTCCCTCCTGTTCCCCGCCATGGAGACTGTaGGTTAACTCTCGCCCCAGCCGACTGAAGGGCCCAGGAGGGCCG +
Preference number: 6 (lower is better)
Translates to: PSHGTGPSCSPPWRL*VNSRPSRLKGPGGP
Trigger: CGGCCCTCCTGGGCCCTTCAGTCGGCTGGGGCGAGAGTTAACCAACAGTCTCCATGGCGGGGAACAGGAGGGACCTGTCCCGTGAGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS TCA 72 bp CAGCACAGATGCCGCCATCCGTCCGCAGAATCGCGCTaGGAGCAGCTCCTTCAAGGGAGCCCGGGACGTCCC +
Preference number: 6 (lower is better)
Translates to: QHRCRHPSAESR*EQLLQGSPGRP
Trigger: GGGACGTCCCGGGCTCCCTTGAAGGAGCTGCTCTCAGCGCGATTCTGCGGACGGATGGCGGCATCTGTGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463705.5
ENST00000475033.5
CDS TCA 72 bp CACTCTCAGGCCCCTCCGGCTCTGACGCTCCAGTGCTaGGACCCAGGGATGCCCTCAGCCTCTTTGCTGGCC +
Preference number: 6 (lower is better)
Translates to: HSQAPPALTLQC*DPGMPSASLLA
Trigger: GGCCAGCAAAGAGGCTGAGGGCATCCCTGGGTCTCAGCACTGGAGCGTCAGAGCCGGAGGGGCCTGAGAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627869.1
CDS TCA 72 bp CCAGGTGCCATAGCCACTCTCAGGCCCCTCCGGCTCTaGCGCTCCAGTGCTGAGACCCAGGGATGCCCTCAG +
Preference number: 6 (lower is better)
Translates to: PGAIATLRPLRL*RSSAETQGCPQ
Trigger: CTGAGGGCATCCCTGGGTCTCAGCACTGGAGCGTCAGAGCCGGAGGGGCCTGAGAGTGGCTATGGCACCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627869.1
CDS TCA 72 bp CAGCAGGTGCGTTGGAGGAGGGGCGCCTTGTGCGGCTaGATCTCGTGTGCAGGAGGAGAGGGCGAGGCTCTC +
Preference number: 6 (lower is better)
Translates to: QQVRWRRGALCG*ISCAGGEGEAL
Trigger: GAGAGCCTCGCCCTCTCCTCCTGCACACGAGATTCAGCCGCACAAGGCGCCCCTCCTCCAACGCACCTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675470.1
CDS GCA 72 bp AAGAGCTCAGAGACAGCTTCCTCCAGTGTCTCGGGGTaGAGCCGGGAGGAGCTGCCTCGCCCCTGCCTCTGC +
Preference number: 6 (lower is better)
Translates to: KSSETASSSVSG*SREELPRPCLC
Trigger: GCAGAGGCAGGGGCGAGGCAGCTCCTCCCGGCTGCACCCCGAGACACTGGAGGAAGCTGTCTCTGAGCTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS CCA 72 bp ACACACCAGGAAGAAAGGGCGTCCGCCGGTTCCGTCTaGGTCAGAGGCGCCCAACACAGCCATGGGCGGGAC +
Preference number: 6 (lower is better)
Translates to: THQEERASAGSV*VRGAQHSHGRD
Trigger: GTCCCGCCCATGGCTGTGTTGGGCGCCTCTGACCCAGACGGAACCGGCGGACGCCCTTTCTTCCTGGTGTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630240.1
CDS CAA 90 bp GCCGGGGGAGTCCACTGCACCCGCCCGTCATGGAACAGGTGGGCCTaGGTCAGGTGGGTGACCGCGAAGTCCCCGTCAGCACTGGTAAAT +
Preference number: 6 (lower is better)
Translates to: AGGVHCTRPSWNRWA*VRWVTAKSPSALVN
Trigger: ATTTACCAGTGCTGACGGGGACTTCGCGGTCACCCACCTGACCAAGGCCCACCTGTTCCATGACGGGCGGGTGCAGTGGACTCCCCCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463705.5
CDS TCA 72 bp CAGGAGAAGTGTGGCAGGGTTGGGCGCAGCCACCTATaGGCCCCTGAACCTCCCCAGGCCGTCGGATCTCAC +
Preference number: 6 (lower is better)
Translates to: QEKCGRVGRSHL*APEPPQAVGSH
Trigger: GTGAGATCCGACGGCCTGGGGAGGTTCAGGGGCTCATAGGTGGCTGCGCCCAACCCTGCCACACTTCTCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS GCA 72 bp AACGTGCAGCCCAGAGCCCCCACAAGCACCTCGTGCTaGCTCCCTCTTTGTGATCCCCCAGCCCAGCCCTCA +
Preference number: 6 (lower is better)
Translates to: NVQPRAPTSTSC*LPLCDPPAQPS
Trigger: TGAGGGCTGGGCTGGGGGATCACAAAGAGGGAGGCAGCACGAGGTGCTTGTGGGGGCTCTGGGCTGCACGTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS GCA 72 bp TCACAGACATCGCACACGGATACACTAGACCCTGCCTaGGGGGAGAGTGGCTGCCAGCCGGGGCACCCAGAC +
Preference number: 6 (lower is better)
Translates to: SQTSHTDTLDPA*GESGCQPGHPD
Trigger: GTCTGGGTGCCCCGGCTGGCAGCCACTCTCCCCGCAGGCAGGGTCTAGTGTATCCGTGTGCGATGTCTGTGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS GCA 72 bp CCAATCACAGACATCGCACACGGATACACTAGACCCTaGCTGCGGGGAGAGTGGCTGCCAGCCGGGGCACCC +
Preference number: 6 (lower is better)
Translates to: PITDIAHGYTRP*LRGEWLPAGAP
Trigger: GGGTGCCCCGGCTGGCAGCCACTCTCCCCGCAGGCAGGGTCTAGTGTATCCGTGTGCGATGTCTGTGATTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS GCA 72 bp TGGAGGGCTGTGCACAGGCACCCAGAGCGGCTTCTCTaGCCGGCCCATCCTGGGCGTTTCCACTTCTCCTTG +
Preference number: 6 (lower is better)
Translates to: WRAVHRHPERLL*PAHPGRFHFSL
Trigger: CAAGGAGAAGTGGAAACGCCCAGGATGGGCCGGGCAGAGAAGCCGCTCTGGGTGCCTGTGCACAGCCCTCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636652.1
CDS CCA 72 bp TTAGACGTGGTTCCAGGTGTGCACACGGGCAACAGCTaGGGGCCTTGGGCCCCCGCAGGCCTGATGGAGGAA +
Preference number: 6 (lower is better)
Translates to: LDVVPGVHTGNS*GPWAPAGLMEE
Trigger: TTCCTCCATCAGGCCTGCGGGGGCCCAAGGCCCCCAGCTGTTGCCCGTGTGCACACCTGGAACCACGTCTAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS CCA 72 bp ACGGGGAGAATGGGCTTGTGGTGCTGGGGCCTTGTGTaGGGTGAGACGCTTCAGACCGGAAGGGTGGGTGGC +
Preference number: 6 (lower is better)
Translates to: TGRMGLWCWGLV*GETLQTGRVGG
Trigger: GCCACCCACCCTTCCGGTCTGAAGCGTCTCACCCCACACAAGGCCCCAGCACCACAAGCCCATTCTCCCCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS CCA 72 bp CCAAAGCGAAGCAGCCTGAGGCCTGGGCCCGGCTCCTaGATTACACACCAGGAAGAAAGGGCGTCCGCCGGT +
Preference number: 6 (lower is better)
Translates to: PKRSSLRPGPGS*ITHQEERASAG
Trigger: ACCGGCGGACGCCCTTTCTTCCTGGTGTGTAATCCAGGAGCCGGGCCCAGGCCTCAGGCTGCTTCGCTTTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630240.1
CDS TCA 72 bp GTGTGGCAGGGTTGGGCGCAGCCACCTATGAGCCCCTaGACCTCCCCAGGCCGTCGGATCTCACTTCAGAGT +
Preference number: 6 (lower is better)
Translates to: VWQGWAQPPMSP*TSPGRRISLQS
Trigger: ACTCTGAAGTGAGATCCGACGGCCTGGGGAGGTTCAGGGGCTCATAGGTGGCTGCGCCCAACCCTGCCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS TCA 72 bp GAGAATGGGCTTGTGGTGCTGGGGCCTTGTGTGGGGTaGGACGCTTCAGACCGGAAGGGTGGGTGGCCTGGA +
Preference number: 6 (lower is better)
Translates to: ENGLVVLGPCVG*DASDRKGGWPG
Trigger: TCCAGGCCACCCACCCTTCCGGTCTGAAGCGTCTCACCCCACACAAGGCCCCAGCACCACAAGCCCATTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS GCA 72 bp CCCAGTTCCCCGTCTCTTAAGCGCTCAACATGCGTCTaGCCCGTTCTCAGGGAGGCCTGGACCCTGTCCCAG +
Preference number: 6 (lower is better)
Translates to: PSSPSLKRSTCV*PVLREAWTLSQ
Trigger: CTGGGACAGGGTCCAGGCCTCCCTGAGAACGGGGCAGACGCATGTTGAGCGCTTAAGAGACGGGGAACTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS CCA 72 bp CCCTCTCACGGGACAGGTCCCTCCTGTTCCCCGCCATaGAGACTGTTGGTTAACTCTCGCCCCAGCCGACTG +
Preference number: 6 (lower is better)
Translates to: PSHGTGPSCSPP*RLLVNSRPSRL
Trigger: CAGTCGGCTGGGGCGAGAGTTAACCAACAGTCTCCATGGCGGGGAACAGGAGGGACCTGTCCCGTGAGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS CCA 72 bp CCACCCCCGGGAGAAGAGCCCAGCCGCGCCGGAGGGTaGAGAGTTCTGTCAACCAGTGCCGTTTCCTTATCA +
Preference number: 6 (lower is better)
Translates to: PPPGEEPSRAGG*RVLSTSAVSLS
Trigger: TGATAAGGAAACGGCACTGGTTGACAGAACTCTCCACCCTCCGGCGCGGCTGGGCTCTTCTCCCGGGGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS CCA 72 bp CGGTTCCGTCTGGGTCAGAGGCGCCCAACACAGCCATaGGCGGGACTTACCGAGAAGTCTGTGTCTTCGGCC +
Preference number: 6 (lower is better)
Translates to: RFRLGQRRPTQP*AGLTEKSVSSA
Trigger: GGCCGAAGACACAGACTTCTCGGTAAGTCCCGCCCATGGCTGTGTTGGGCGCCTCTGACCCAGACGGAACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630240.1
CDS CAA 72 bp GGGACAGGTCCCTCCTGTTCCCCGCCATGGAGACTGTaGGTTAACTCTCGCCCCAGCCGACTGAAGGGCCCA +
Preference number: 6 (lower is better)
Translates to: GTGPSCSPPWRL*VNSRPSRLKGP
Trigger: TGGGCCCTTCAGTCGGCTGGGGCGAGAGTTAACCAACAGTCTCCATGGCGGGGAACAGGAGGGACCTGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS CAA 90 bp ACCACAGCATGCACCTCTGATAGGTCCAGGAGAAGTGTGGCAGGGTaGGGCGCAGCCACCTATGAGCCCCTGAACCTCCCCAGGCCGTCG +
Preference number: 6 (lower is better)
Translates to: TTACTSDRSRRSVAG*GAATYEPLNLPRPS
Trigger: CGACGGCCTGGGGAGGTTCAGGGGCTCATAGGTGGCTGCGCCCAACCCTGCCACACTTCTCCTGGACCTATCAGAGGTGCATGCTGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS CAA 90 bp ATCGCGCCAGCCGGTGTCTGCAGCCTGAAAATCGCGTCTCTGGTCTaGTTCCCCAGCGAGCCGTTCAGGACTCTCTGTCCGCCTGCAGCC +
Preference number: 6 (lower is better)
Translates to: IAPAGVCSLKIASLV*FPSEPFRTLCPPAA
Trigger: GGCTGCAGGCGGACAGAGAGTCCTGAACGGCTCGCTGGGGAACAAGACCAGAGACGCGATTTTCAGGCTGCAGACACCGGCTGGCGCGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675470.1
CDS CCA 72 bp ACAGGCCGAAGCGGACGAGGACCACGTCCGAGATGTTaGCCACGGGTCGGGACCACTTGTTGTAACCGGAGA +
Preference number: 6 (lower is better)
Translates to: TGRSGRGPRPRC*PRVGTTCCNRR
Trigger: TCTCCGGTTACAACAAGTGGTCCCGACCCGTGGCCAACATCTCGGACGTGGTCCTCGTCCGCTTCGGCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000370263.9
ENST00000467563.3
ENST00000498043.6
ENST00000626188.1
ENST00000627000.1
ENST00000628665.1
ENST00000675470.1
CDS CCA 72 bp CCCTGCACACCGGGGTGCGGGGCAGCCCTGCTTCCTTaGAACAAAGGCTGCACTTGCAGAAGTAGCTCAGAC +
Preference number: 6 (lower is better)
Translates to: PCTPGCGAALLP*NKGCTCRSSSD
Trigger: GTCTGAGCTACTTCTGCAAGTGCAGCCTTTGTTCCAAGGAAGCAGGGCTGCCCCGCACCCCGGTGTGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463705.5
ENST00000475033.5
CDS CCA 72 bp AGGTCCAGGAGGGTCTCGGGAAAGGATGGGGGCAACTaGAGTACCATCCTAAAGCCGTCTCAGCCCCAGGGG +
Preference number: 6 (lower is better)
Translates to: RSRRVSGKDGGN*STILKPSQPQG
Trigger: CCCCTGGGGCTGAGACGGCTTTAGGATGGTACTCCAGTTGCCCCCATCCTTTCCCGAGACCCTCCTGGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS CCA 72 bp CTGCTCCAAGGAACGGGGAGAATGGGCTTGTGGTGCTaGGGCCTTGTGTGGGGTGAGACGCTTCAGACCGGA +
Preference number: 6 (lower is better)
Translates to: LLQGTGRMGLWC*GLVWGETLQTG
Trigger: TCCGGTCTGAAGCGTCTCACCCCACACAAGGCCCCAGCACCACAAGCCCATTCTCCCCGTTCCTTGGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS CCA 72 bp AGCTCCTCTCCAAATCGTTCTCTTCCTCGCAGCAGATaGGGGTGTGGGGCGGCCTCGACCCTCCTCTGTGTC +
Preference number: 6 (lower is better)
Translates to: SSSPNRSLPRSR*GCGAASTLLCV
Trigger: GACACAGAGGAGGGTCGAGGCCGCCCCACACCCCCATCTGCTGCGAGGAAGAGAACGATTTGGAGAGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS CCA 72 bp CTCCACATGGCTGCTGGCACAAAACCAGGCGGCGGATaGGCCGAGGACTGCTTTGGGTCTCCTGTCACACTG +
Preference number: 6 (lower is better)
Translates to: LHMAAGTKPGGG*AEDCFGSPVTL
Trigger: CAGTGTGACAGGAGACCCAAAGCAGTCCTCGGCCCATCCGCCGCCTGGTTTTGTGCCAGCAGCCATGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637443.1
CDS CAA 72 bp TGCACCTCTGATAGGTCCAGGAGAAGTGTGGCAGGGTaGGGCGCAGCCACCTATGAGCCCCTGAACCTCCCC +
Preference number: 6 (lower is better)
Translates to: CTSDRSRRSVAG*GAATYEPLNLP
Trigger: GGGGAGGTTCAGGGGCTCATAGGTGGCTGCGCCCAACCCTGCCACACTTCTCCTGGACCTATCAGAGGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS TCA 72 bp TGGGTTACTCCATCGCGCCAGCCGGTGTCTGCAGCCTaGAAATCGCGTCTCTGGTCTTGTTCCCCAGCGAGC +
Preference number: 6 (lower is better)
Translates to: WVTPSRQPVSAA*KSRLWSCSPAS
Trigger: GCTCGCTGGGGAACAAGACCAGAGACGCGATTTTCAGGCTGCAGACACCGGCTGGCGCGATGGAGTAACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675470.1
CDS GCA 72 bp TACCGAGAAGTCTGTGTCTTCGGCCTTCAGGTGGTCTaGAATGTACTGGACGCCCTCCACCGCCCGGGTCAG +
Preference number: 6 (lower is better)
Translates to: YREVCVFGLQVV*NVLDALHRPGQ
Trigger: CTGACCCGGGCGGTGGAGGGCGTCCAGTACATTGCAGACCACCTGAAGGCCGAAGACACAGACTTCTCGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630240.1
CDS GCA 72 bp GCTGGCACAAAACCAGGCGGCGGATGGGCCGAGGACTaGTTTGGGTCTCCTGTCACACTGACTTCCAGGGAA +
Preference number: 6 (lower is better)
Translates to: AGTKPGGGWAED*FGSPVTLTSRE
Trigger: TTCCCTGGAAGTCAGTGTGACAGGAGACCCAAAGCAGTCCTCGGCCCATCCGCCGCCTGGTTTTGTGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637443.1
CDS CCA 72 bp CGGCGGTCATGCTGGCCCGAGACAGGACGCCCCTCCTaGGGAGACGGAGCTCTTGTAAATATCAAGGGCATT +
Preference number: 6 (lower is better)
Translates to: RRSCWPETGRPS*GDGALVNIKGI
Trigger: AATGCCCTTGATATTTACAAGAGCTCCGTCTCCCCAGGAGGGGCGTCCTGTCTCGGGCCAGCATGACCGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480012.1
CDS CCA 72 bp CCTCCCCAGGCCGTCGGATCTCACTTCAGAGTGGCCTaGGCATGGCCTCAGGTTAGGTCAGGTGAAGACTCT +
Preference number: 6 (lower is better)
Translates to: PPQAVGSHFRVA*AWPQVRSGEDS
Trigger: AGAGTCTTCACCTGACCTAACCTGAGGCCATGCCCAGGCCACTCTGAAGTGAGATCCGACGGCCTGGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS CCA 72 bp GGACTTACCGAGAAGTCTGTGTCTTCGGCCTTCAGGTaGTCTGCAATGTACTGGACGCCCTCCACCGCCCGG +
Preference number: 6 (lower is better)
Translates to: GLTEKSVSSAFR*SAMYWTPSTAR
Trigger: CCGGGCGGTGGAGGGCGTCCAGTACATTGCAGACCACCTGAAGGCCGAAGACACAGACTTCTCGGTAAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630240.1
CDS CCA 72 bp CAGGCACCCAGAGCGGCTTCTCTGCCCGGCCCATCCTaGGCGTTTCCACTTCTCCTTGTTGTAGAGGACGAT +
Preference number: 6 (lower is better)
Translates to: QAPRAASLPGPS*AFPLLLVVEDD
Trigger: ATCGTCCTCTACAACAAGGAGAAGTGGAAACGCCCAGGATGGGCCGGGCAGAGAAGCCGCTCTGGGTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636652.1
CDS CCA 72 bp CACAAAACCAGGCGGCGGATGGGCCGAGGACTGCTTTaGGTCTCCTGTCACACTGACTTCCAGGGAAGGGCT +
Preference number: 6 (lower is better)
Translates to: HKTRRRMGRGLL*VSCHTDFQGRA
Trigger: AGCCCTTCCCTGGAAGTCAGTGTGACAGGAGACCCAAAGCAGTCCTCGGCCCATCCGCCGCCTGGTTTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637443.1
CDS TCA 72 bp CGCGCTGGAAGCCCACGTTTGGTGATGTATGTGTTATaGTGGCCACGTGTCCTTCCCCCATCAGCGACGGGG +
Preference number: 6 (lower is better)
Translates to: RAGSPRLVMYVL*WPRVLPPSATG
Trigger: CCCCGTCGCTGATGGGGGAAGGACACGTGGCCATCATAACACATACATCACCAAACGTGGGCTTCCAGCGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS TCA 72 bp TGCAGGAGGAGAGGGCGAGGCTCTCTGGTTCCAGGTTaGGCTCATGGCTCCTCATACACCTGCTTTGGGACG +
Preference number: 6 (lower is better)
Translates to: CRRRGRGSLVPG*AHGSSYTCFGT
Trigger: CGTCCCAAAGCAGGTGTATGAGGAGCCATGAGCTCAACCTGGAACCAGAGAGCCTCGCCCTCTCCTCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675470.1
CDS GCA 72 bp GCACATCTGGGTTACTCCATCGCGCCAGCCGGTGTCTaGAGCCTGAAAATCGCGTCTCTGGTCTTGTTCCCC +
Preference number: 6 (lower is better)
Translates to: AHLGYSIAPAGV*SLKIASLVLFP
Trigger: GGGGAACAAGACCAGAGACGCGATTTTCAGGCTGCAGACACCGGCTGGCGCGATGGAGTAACCCAGATGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675470.1
CDS CCA 72 bp GGGGATGCGGATGGAGGTGACATTCTCATAGTCAGCTaGGTCCCAGCGCAGCTTGTAGTCGTGCCACTCCTG +
Preference number: 6 (lower is better)
Translates to: GDADGGDILIVS*VPAQLVVVPLL
Trigger: CAGGAGTGGCACGACTACAAGCTGCGCTGGGACCCAGCTGACTATGAGAATGTCACCTCCATCCGCATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370263.9
ENST00000467563.3
ENST00000498043.6
ENST00000627000.1
ENST00000627869.1
ENST00000628665.1
CDS CAA 90 bp GCTCTCTGGTTCCAGGTTGAGCTCATGGCTCCTCATACACCTGCTTaGGGACGGGCAGGAGCTCTTCCTCACTGGCCAGAGCTGTCTGTC +
Preference number: 6 (lower is better)
Translates to: ALWFQVELMAPHTPA*GRAGALPHWPELSV
Trigger: GACAGACAGCTCTGGCCAGTGAGGAAGAGCTCCTGCCCGTCCCAAAGCAGGTGTATGAGGAGCCATGAGCTCAACCTGGAACCAGAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675470.1
CDS CAA 90 bp GGACCCTGTCCCAGCCCTGGTGGGGATAATTACCCTGACGCTCGTTaGCAGCGTTTAATTTGCTTCCTCCGCGCTGGAAGCCCACGTTTG +
Preference number: 6 (lower is better)
Translates to: GPCPSPGGDNYPDAR*QRLICFLRAGSPRL
Trigger: CAAACGTGGGCTTCCAGCGCGGAGGAAGCAAATTAAACGCTGCAAACGAGCGTCAGGGTAATTATCCCCACCAGGGCTGGGACAGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS GCA 72 bp CAGCCCTCAGTTGTACCCCAGGGGAAACTGAGTCCCTaGCTGGTAAATGTGCAGCAACACAGCCACAGCAGG +
Preference number: 6 (lower is better)
Translates to: QPSVVPQGKLSP*LVNVQQHSHSR
Trigger: CCTGCTGTGGCTGTGTTGCTGCACATTTACCAGGCAGGGACTCAGTTTCCCCTGGGGTACAACTGAGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS GCA 72 bp TCCTCTGTGTCTGGGCTGTTGTGGCACCAGCACCTTTaGCCCAGTTCCCCGTCTCTTAAGCGCTCAACATGC +
Preference number: 6 (lower is better)
Translates to: SSVSGLLWHQHL*PSSPSLKRSTC
Trigger: GCATGTTGAGCGCTTAAGAGACGGGGAACTGGGGCAAAGGTGCTGGTGCCACAACAGCCCAGACACAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS CCA 72 bp GCAGAAGTAGCTCAGACTTTCACCTGCTTCAAACCCTaGGCCGTCTTCTGGTCTCAAGGCCAGGAGGCAGGG +
Preference number: 6 (lower is better)
Translates to: AEVAQTFTCFKP*AVFWSQGQEAG
Trigger: CCCTGCCTCCTGGCCTTGAGACCAGAAGACGGCCCAGGGTTTGAAGCAGGTGAAAGTCTGAGCTACTTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS CCA 72 bp GCTGTCTGTCCGCTCTGCTCTGCCCGACTGTCTTCCTaGCACTCTTCACACCAAACGTCATGCGTCTGCTCT +
Preference number: 6 (lower is better)
Translates to: AVCPLCSARLSS*HSSHQTSCVCS
Trigger: AGAGCAGACGCATGACGTTTGGTGTGAAGAGTGCCAGGAAGACAGTCGGGCAGAGCAGAGCGGACAGACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675470.1
CDS GCA 72 bp GGGTGCGGGGCAGCCCTGCTTCCTTGGAACAAAGGCTaGACTTGCAGAAGTAGCTCAGACTTTCACCTGCTT +
Preference number: 6 (lower is better)
Translates to: GCGAALLPWNKG*TCRSSSDFHLL
Trigger: AAGCAGGTGAAAGTCTGAGCTACTTCTGCAAGTGCAGCCTTTGTTCCAAGGAAGCAGGGCTGCCCCGCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463705.5
ENST00000475033.5
CDS GCA 72 bp GAGGCGCACGGGACTGACTCTTCCTATGGAAAATCCTaGACAGGGAGATCAAATCCCAGCCTCCCAGAGGGA +
Preference number: 6 (lower is better)
Translates to: EAHGTDSSYGKS*TGRSNPSLPEG
Trigger: TCCCTCTGGGAGGCTGGGATTTGATCTCCCTGTGCAGGATTTTCCATAGGAAGAGTCAGTCCCGTGCGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS CCA 72 bp CAGGCCGTCGGATCTCACTTCAGAGTGGCCTGGGCATaGCCTCAGGTTAGGTCAGGTGAAGACTCTATTCCT +
Preference number: 6 (lower is better)
Translates to: QAVGSHFRVAWA*PQVRSGEDSIP
Trigger: AGGAATAGAGTCTTCACCTGACCTAACCTGAGGCCATGCCCAGGCCACTCTGAAGTGAGATCCGACGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS CAA 72 bp CAGGCTGGTCCTTTTCGCTCCCATGTGAAGGCACCATaGCCAGGCCAATGCTGGTCACTCTGTGATGACCAG +
Preference number: 6 (lower is better)
Translates to: QAGPFRSHVKAP*PGQCWSLCDDQ
Trigger: CTGGTCATCACAGAGTGACCAGCATTGGCCTGGCAATGGTGCCTTCACATGGGAGCGAAAAGGACCAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463705.5
ENST00000475033.5
CDS CAA 72 bp CCCAGCCCTGGTGGGGATAATTACCCTGACGCTCGTTaGCAGCGTTTAATTTGCTTCCTCCGCGCTGGAAGC +
Preference number: 6 (lower is better)
Translates to: PSPGGDNYPDAR*QRLICFLRAGS
Trigger: GCTTCCAGCGCGGAGGAAGCAAATTAAACGCTGCAAACGAGCGTCAGGGTAATTATCCCCACCAGGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS CAA 90 bp TCCTCACCTCAGGCTGGTCCTTTTCGCTCCCATGTGAAGGCACCATaGCCAGGCCAATGCTGGTCACTCTGTGATGACCAGGTTGGAGAA +
Preference number: 6 (lower is better)
Translates to: SSPQAGPFRSHVKAP*PGQCWSLCDDQVGE
Trigger: TTCTCCAACCTGGTCATCACAGAGTGACCAGCATTGGCCTGGCAATGGTGCCTTCACATGGGAGCGAAAAGGACCAGCCTGAGGTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463705.5
ENST00000475033.5
CDS CCA 72 bp CCTGCAGTCCACACTATTCTCCCAGAAAGGCCAGGATaGGGTCTGATGGCGAAAAGCACTCCTGCCCAAAAG +
Preference number: 6 (lower is better)
Translates to: PAVHTILPERPG*GLMAKSTPAQK
Trigger: CTTTTGGGCAGGAGTGCTTTTCGCCATCAGACCCCATCCTGGCCTTTCTGGGAGAATAGTGTGGACTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498043.6
CDS CCA 72 bp CTTTCTCTGGCCCTAGGTTTCCTCATCTACAGCCACTaGCACAAGGACACGGCCAGGGCAAGATATGGTGGA +
Preference number: 6 (lower is better)
Translates to: LSLALGFLIYSH*HKDTARARYGG
Trigger: TCCACCATATCTTGCCCTGGCCGTGTCCTTGTGCCAGTGGCTGTAGATGAGGAAACCTAGGGCCAGAGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636481.1
CDS GCA 72 bp GGGGCAGCCCTGCTTCCTTGGAACAAAGGCTGCACTTaGAGAAGTAGCTCAGACTTTCACCTGCTTCAAACC +
Preference number: 6 (lower is better)
Translates to: GAALLPWNKGCT*RSSSDFHLLQT
Trigger: GGTTTGAAGCAGGTGAAAGTCTGAGCTACTTCTGCAAGTGCAGCCTTTGTTCCAAGGAAGCAGGGCTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463705.5
ENST00000475033.5
CDS GCA 72 bp AAGGCTGCACTTGCAGAAGTAGCTCAGACTTTCACCTaGTTCAAACCCTGGGCCGTCTTCTGGTCTCAAGGC +
Preference number: 6 (lower is better)
Translates to: KAALAEVAQTFT*FKPWAVFWSQG
Trigger: GCCTTGAGACCAGAAGACGGCCCAGGGTTTGAAGCAGGTGAAAGTCTGAGCTACTTCTGCAAGTGCAGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS TCA 72 bp AGCTGCCCGCAGCTGCCTGACCCTAATCTTCTCCAATaGAGTGGCTCTGAGAGGTTTTGTGGTCAGTATCAG +
Preference number: 6 (lower is better)
Translates to: SCPQLPDPNLLQ*SGSERFCGQYQ
Trigger: CTGATACTGACCACAAAACCTCTCAGAGCCACTTCATTGGAGAAGATTAGGGTCAGGCAGCTGCGGGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS TCA 72 bp CCGCTTTGGTTAAGGCTTAAAGGAGGCGCACGGGACTaGCTCTTCCTATGGAAAATCCTGCACAGGGAGATC +
Preference number: 6 (lower is better)
Translates to: PLWLRLKGGARD*LFLWKILHREI
Trigger: GATCTCCCTGTGCAGGATTTTCCATAGGAAGAGTCAGTCCCGTGCGCCTCCTTTAAGCCTTAACCAAAGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS TCA 72 bp CCAGCACATCTGGCTGATTCTCATTCAGGCCTTGAATaGAAGGCCATCTTCCCAAGAGTCCTCCCTGACTCC +
Preference number: 6 (lower is better)
Translates to: PAHLADSHSGLE*KAIFPRVLPDS
Trigger: GGAGTCAGGGAGGACTCTTGGGAAGATGGCCTTTCATTCAAGGCCTGAATGAGAATCAGCCAGATGTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS GCA 72 bp TTTCGCTCCCATGTGAAGGCACCATTGCCAGGCCAATaGTGGTCACTCTGTGATGACCAGGTTGGAGAAAAG +
Preference number: 6 (lower is better)
Translates to: FRSHVKAPLPGQ*WSLCDDQVGEK
Trigger: CTTTTCTCCAACCTGGTCATCACAGAGTGACCAGCATTGGCCTGGCAATGGTGCCTTCACATGGGAGCGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463705.5
ENST00000475033.5
CDS CCA 72 bp GTGGTCAGTATCAGTTCTGTCTTTGATTTCAGCGCCTaGTCTGGACAGCAGGAGGAAGAGCTCAGAGACAGC +
Preference number: 6 (lower is better)
Translates to: VVSISSVFDFSA*SGQQEEELRDS
Trigger: GCTGTCTCTGAGCTCTTCCTCCTGCTGTCCAGACCAGGCGCTGAAATCAAAGACAGAACTGATACTGACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS CAA 90 bp AGTGATGGGCATTGCAGGCCGCTCTGTCAGGTGGCGTTTCTAACCTaGTTCTATCCACAGAACTCGTCGTCATTTGACAGACAGAGGCCA +
Preference number: 6 (lower is better)
Translates to: SDGHCRPLCQVAFLT*FYPQNSSSFDRQRP
Trigger: TGGCCTCTGTCTGTCAAATGACGACGAGTTCTGTGGATAGAACAAGGTTAGAAACGCCACCTGACAGAGCGGCCTGCAATGCCCATCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463705.5
ENST00000475033.5
ENST00000480012.1
CDS TCA 72 bp AAACCAACGAGCTTCCCCTCATGGGCTGCACTCACTTaGCTTTCAGCTCCTCTCCAAATCGTTCTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: KPTSFPSWAALT*LSAPLQIVLFL
Trigger: GAGGAAGAGAACGATTTGGAGAGGAGCTGAAAGTCAAGTGAGTGCAGCCCATGAGGGGAAGCTCGTTGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS GCA 72 bp GATAATTACCCTGACGCTCGTTTGCAGCGTTTAATTTaGTTCCTCCGCGCTGGAAGCCCACGTTTGGTGATG +
Preference number: 6 (lower is better)
Translates to: DNYPDARLQRLI*FLRAGSPRLVM
Trigger: CATCACCAAACGTGGGCTTCCAGCGCGGAGGAAGCAAATTAAACGCTGCAAACGAGCGTCAGGGTAATTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS CCA 72 bp CGCTCGTTTGCAGCGTTTAATTTGCTTCCTCCGCGCTaGAAGCCCACGTTTGGTGATGTATGTGTTATGATG +
Preference number: 6 (lower is better)
Translates to: RSFAAFNLLPPR*KPTFGDVCVMM
Trigger: CATCATAACACATACATCACCAAACGTGGGCTTCCAGCGCGGAGGAAGCAAATTAAACGCTGCAAACGAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475033.5
CDS CAA 72 bp CATTGCAGGCCGCTCTGTCAGGTGGCGTTTCTAACCTaGTTCTATCCACAGAACTCGTCGTCATTTGACAGA +
Preference number: 6 (lower is better)
Translates to: HCRPLCQVAFLT*FYPQNSSSFDR
Trigger: TCTGTCAAATGACGACGAGTTCTGTGGATAGAACAAGGTTAGAAACGCCACCTGACAGAGCGGCCTGCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463705.5
ENST00000475033.5
ENST00000480012.1
CDS TCA 72 bp TCTGAGAGGTTTTGTGGTCAGTATCAGTTCTGTCTTTaGTTTCAGCGCCTGGTCTGGACAGCAGGAGGAAGA +
Preference number: 6 (lower is better)
Translates to: SERFCGQYQFCL*FQRLVWTAGGR
Trigger: TCTTCCTCCTGCTGTCCAGACCAGGCGCTGAAATCAAAGACAGAACTGATACTGACCACAAAACCTCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475033.5