Pregenerated sensors for CHRNA3 (Homo sapiens)
Ensembl gene IDs: ENSG00000080644Ensembl transcript IDs: ENST00000326828.6, ENST00000348639.7, ENST00000558903.1, ENST00000559002.5, ENST00000559080.1, ENST00000559658.5, ENST00000559941.1, ENST00000561128.1
Found 192 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTGAGGAAGAGGACCCTCACCAGACACCAAATTTGCTGGTGCCTTaGCCTTGGACCTCCCAACCTCCAAAACTGAGAAGTTTCTGTTGT | + |
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Preference number: 1 (lower is better) Translates to: FEEEDPHQTPNLLVP*PWTSQPPKLRSFCC Trigger: ACAACAGAAACTTCTCAGTTTTGGAGGTTGGGAGGTCCAAGGTCAAGGCACCAGCAAATTTGGTGTCTGGTGAGGGTCCTCTTCCTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| 3UTR TCA 90 bp | CATGATTTCTCATGGTATAATTTAGAAGTATGCAAGAGAAGTAGTTaGAGCTCTCTGAAATGGAGGCATAGCCCTTTAGACCCAGTAAAG | + |
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Preference number: 1 (lower is better) Translates to: HDFSWYNLEVCKRSS*SSLKWRHSPLDPVK Trigger: CTTTACTGGGTCTAAAGGGCTATGCCTCCATTTCAGAGAGCTTCAACTACTTCTCTTGCATACTTCTAAATTATACCATGAGAAATCATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| 3UTR TCA 90 bp | GAACGAGAAATGCATGGTAAGAAATGGGTAACGATGGGGGATTGCTaGATTAGTATAAACCTTCAAAGAGATTATGGGCTAAATAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: EREMHGKKWVTMGDC*ISINLQRDYGLNKK Trigger: TTTCTTATTTAGCCCATAATCTCTTTGAAGGTTTATACTAATTCAGCAATCCCCCATCGTTACCCATTTCTTACCATGCATTTCTCGTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| 3UTR-3UTR TCA 90 bp | GTGATTGTCTTAGATAGAAGGTGGGGCCTTGGAAAGGTGATTAGGCCATGGGGGCTAGAAGGCACCCTTTaGGGAAGAGGACCCTCACCA | + |
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Preference number: 2 (lower is better) Translates to: VIVLDRRWGLGKVIRPWGLEGTL*GRGPSP Trigger: TGGTGAGGGTCCTCTTCCTCAAAGGGTGCCTTCTAG...CCCCCATGGCCTAATCACCTTTCCAAGGCCCCACCTTCTATCTAAGACAATCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| 3UTR-3UTR GCA 90 bp | GTGATTGTCTTAGATAGAAGGTGGGGCCTTGGAAAGGTGATTAGGCCATGGGGGGAAGCAGCCTCCTCCTaGCCTGACACAAGGAAGTCT | + |
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Preference number: 2 (lower is better) Translates to: VIVLDRRWGLGKVIRPWGEAASS*PDTRKS Trigger: AGACTTCCTTGTGTCAGGGCAGGAGGAGGCTGCTTC...CCCCCATGGCCTAATCACCTTTCCAAGGCCCCACCTTCTATCTAAGACAATCAC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| 3UTR-3UTR TCA 90 bp | AAGAGGACCCTCACCAGACACCAAATTTGCTGGTGCCTTGACCTTGGACCTCCCGTAGTTGAAGCTCTCTaGAATGGAGGCATAGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: KRTLTRHQICWCLDLGPPVVEAL*NGGIAL Trigger: AAGGGCTATGCCTCCATTTCAGAGAGCTTCAACTAC...GGGAGGTCCAAGGTCAAGGCACCAGCAAATTTGGTGTCTGGTGAGGGTCCTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| 3UTR-3UTR GCA 90 bp | GTTGAAGATTGGAAATTCATAGCCCAGGTTCTTGATCGGATGTTTCTGTGGACTCCAGGTGGCGGAGGTTaGGGTGAGCTGAGATCACGC | + |
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Preference number: 2 (lower is better) Translates to: VEDWKFIAQVLDRMFLWTPGGGG*GELRSR Trigger: GCGTGATCTCAGCTCACCGCAACCTCCGCCACCTGG...AGTCCACAGAAACATCCGATCAAGAACCTGGGCTATGAATTTCCAATCTTCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| 3UTR-3UTR TCA 90 bp | GTGGTCCAAATGTGTCCTCCCCCAATTCATATGTTGAAACCTATTCCCAGCGTGAATTTGCTGGTGCCTTaGCCTTGGACCTCCCAACCT | + |
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Preference number: 2 (lower is better) Translates to: VVQMCPPPIHMLKPIPSVNLLVP*PWTSQP Trigger: AGGTTGGGAGGTCCAAGGTCAAGGCACCAGCAAATT...CACGCTGGGAATAGGTTTCAACATATGAATTGGGGGAGGACACATTTGGACCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| 3UTR CAA 90 bp | GGAAGAGGACCCTCACCAGACACCAAATTTGCTGGTGCCTTGACCTaGGACCTCCCAACCTCCAAAACTGAGAAGTTTCTGTTGTTTATA | + |
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Preference number: 2 (lower is better) Translates to: GRGPSPDTKFAGALT*DLPTSKTEKFLLFI Trigger: TATAAACAACAGAAACTTCTCAGTTTTGGAGGTTGGGAGGTCCAAGGTCAAGGCACCAGCAAATTTGGTGTCTGGTGAGGGTCCTCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| 3UTR-3UTR CCA 90 bp | ACCAGGGGCAATTTTGCTCCTAAGGGAACATTTAACAATGGAGACATTCTTGGTAAGGTGATTAGGCCATaGGGGCTCTGCTCTCATGAA | + |
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Preference number: 2 (lower is better) Translates to: TRGNFAPKGTFNNGDILGKVIRP*GLCSHE Trigger: TTCATGAGAGCAGAGCCCCCATGGCCTAATCACCTT...ACCAAGAATGTCTCCATTGTTAAATGTTCCCTTAGGAGCAAAATTGCCCCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| 3UTR-3UTR GCA 90 bp | TTGATCGGATGTTTCTGTGGACTTTTCTTTTCGTTTCAATTGTTGGATCTCTTGGAAGCAGCCTCCTCCTaGCCTGACACAAGGAAGTCT | + |
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Preference number: 2 (lower is better) Translates to: LIGCFCGLFFSFQLLDLLEAASS*PDTRKS Trigger: AGACTTCCTTGTGTCAGGGCAGGAGGAGGCTGCTTC...CAAGAGATCCAACAATTGAAACGAAAAGAAAAGTCCACAGAAACATCCGATCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| 3UTR-3UTR TCA 90 bp | GGTACTGCTAAAGATCCTACAATGCACAGGATACCCCCATTCTGTACCAACACAACGATGGGGGATTGCTaGATTAGTATAAACCTTCAA | + |
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Preference number: 2 (lower is better) Translates to: GTAKDPTMHRIPPFCTNTTMGDC*ISINLQ Trigger: TTGAAGGTTTATACTAATTCAGCAATCCCCCATCGT...TGTGTTGGTACAGAATGGGGGTATCCTGTGCATTGTAGGATCTTTAGCAGTACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| 3UTR-3UTR GCA 90 bp | CTAAAGCAATGTTTCTCAACCAGGGGCAATTTTGCTCCTAAGGGAACATTTAACACCAGACACCAAATTTaGTGGTGCCTTGACCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: LKQCFSTRGNFAPKGTFNTRHQI*WCLDLG Trigger: TCCAAGGTCAAGGCACCAGCAAATTTGGTGTCTGGT...GTTAAATGTTCCCTTAGGAGCAAAATTGCCCCTGGTTGAGAAACATTGCTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| 3UTR-3UTR TCA 90 bp | CTAAAGCAATGTTTCTCAACCAGGGGCAATTTTGCTCCTAAGGGAACATTTAACTGCAAGAGAAGTAGTTaGAGCTCTCTGAAATGGAGG | + |
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Preference number: 2 (lower is better) Translates to: LKQCFSTRGNFAPKGTFNCKRSS*SSLKWR Trigger: CCTCCATTTCAGAGAGCTTCAACTACTTCTCTTGCA...GTTAAATGTTCCCTTAGGAGCAAAATTGCCCCTGGTTGAGAAACATTGCTTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| 3UTR CAA 90 bp | TGGAAAATAAGTAAACCTCGAAATGCCAAAAACAAAGCTGGTAGCTaGATAACAGAAAGTACGTTCTTACTAGGAAGCAGCCTCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: WKISKPRNAKNKAGS*ITESTFLLGSSLLL Trigger: CAGGAGGAGGCTGCTTCCTAGTAAGAACGTACTTTCTGTTATCAAGCTACCAGCTTTGTTTTTGGCATTTCGAGGTTTACTTATTTTCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| 3UTR-3UTR TCA 90 bp | AGGGAACATTTAACAATGGAGACATTCTTGGTTATCATAACTGGTGAAGAAGCACCCAACCTCCAAAACTaGGAAGTTTCTGTTGTTTAT | + |
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Preference number: 2 (lower is better) Translates to: REHLTMETFLVIITGEEAPNLQN*EVSVVY Trigger: ATAAACAACAGAAACTTCTCAGTTTTGGAGGTTGGG...TGCTTCTTCACCAGTTATGATAACCAAGAATGTCTCCATTGTTAAATGTTCCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| 3UTR GCA 72 bp | GGTGGCGGAGGTTGCGGTGAGCTGAGATCACGCCATTaGACTCCAGCTAGGAAGCAGCCTCCTCCTGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: GGGGCGELRSRH*TPARKQPPPAL Trigger: CAGGGCAGGAGGAGGCTGCTTCCTAGCTGGAGTGCAATGGCGTGATCTCAGCTCACCGCAACCTCCGCCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| 3UTR TCA 72 bp | ATTGCACTCCAGCTAGGAAGCAGCCTCCTCCTGCCCTaGCACAAGGAAGTCTCCCAGGCAGGCACACAGCTT | + |
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Preference number: 3 (lower is better) Translates to: IALQLGSSLLLP*HKEVSQAGTQL Trigger: AAGCTGTGTGCCTGCCTGGGAGACTTCCTTGTGTCAGGGCAGGAGGAGGCTGCTTCCTAGCTGGAGTGCAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| 3UTR TCA 72 bp | GAGGACCCTCACCAGACACCAAATTTGCTGGTGCCTTaGCCTTGGACCTCCCAACCTCCAAAACTGAGAAGT | + |
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Preference number: 3 (lower is better) Translates to: EDPHQTPNLLVP*PWTSQPPKLRS Trigger: ACTTCTCAGTTTTGGAGGTTGGGAGGTCCAAGGTCAAGGCACCAGCAAATTTGGTGTCTGGTGAGGGTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| 3UTR-3UTR CAA 90 bp | GTGGTCCAAATGTGTCCTCCCCCAATTCATATGTTGAAACCTATTCCCAGCGTGGCTAGAAGGCACCCTTaGAGGAAGAGGACCCTCACC | + |
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Preference number: 3 (lower is better) Translates to: VVQMCPPPIHMLKPIPSVARRHP*RKRTLT Trigger: GGTGAGGGTCCTCTTCCTCAAAGGGTGCCTTCTAGC...CACGCTGGGAATAGGTTTCAACATATGAATTGGGGGAGGACACATTTGGACCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| 3UTR CCA 72 bp | AAACCTATTCCCAGCGTGATTGTCTTAGATAGAAGGTaGGGCCTTGGAAAGGTGATTAGGCCATGGGGGCTC | + |
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Preference number: 3 (lower is better) Translates to: KPIPSVIVLDRR*GLGKVIRPWGL Trigger: GAGCCCCCATGGCCTAATCACCTTTCCAAGGCCCCACCTTCTATCTAAGACAATCACGCTGGGAATAGGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| 3UTR GCA 72 bp | AGTGCTAAGGCTGAGAAACCCTGTTCTAAAGGTTCATaGTGTGGTCCAAATGTGTCCTCCCCCAATTCATAT | + |
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Preference number: 3 (lower is better) Translates to: SAKAEKPCSKGS*CGPNVSSPNSY Trigger: ATATGAATTGGGGGAGGACACATTTGGACCACAGCATGAACCTTTAGAACAGGGTTTCTCAGCCTTAGCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| 3UTR TCA 72 bp | TGGTGCCTTGACCTTGGACCTCCCAACCTCCAAAACTaGGAAGTTTCTGTTGTTTATAATCCACCCAGTTTA | + |
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Preference number: 3 (lower is better) Translates to: WCLDLGPPNLQN*EVSVVYNPPSL Trigger: TAAACTGGGTGGATTATAAACAACAGAAACTTCTCAGTTTTGGAGGTTGGGAGGTCCAAGGTCAAGGCACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| 3UTR-3UTR CAA 90 bp | AGTCTCTGTGAATCATCTGTCAGTGGTGATGATCACGTTAAGTTTCAGAAGTGTAACAAAGCTGGTAGCTaGATAACAGAAAGTACGTTC | + |
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Preference number: 3 (lower is better) Translates to: SLCESSVSGDDHVKFQKCNKAGS*ITESTF Trigger: GAACGTACTTTCTGTTATCAAGCTACCAGCTTTGTT...ACACTTCTGAAACTTAACGTGATCATCACCACTGACAGATGATTCACAGAGACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| 3UTR-3UTR CAA 90 bp | AGTCTCTGTGAATCATCTGTCAGTGGTGATGATCACGTTAAGTTTCAGAAGTGTACTGAGAAGTTTCTGTaGTTTATAATCCACCCAGTT | + |
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Preference number: 3 (lower is better) Translates to: SLCESSVSGDDHVKFQKCTEKFL*FIIHPV Trigger: AACTGGGTGGATTATAAACAACAGAAACTTCTCAGT...ACACTTCTGAAACTTAACGTGATCATCACCACTGACAGATGATTCACAGAGACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| 3UTR TCA 72 bp | TTTAACAATGGAGACATTCTTGGTTATCATAACTGGTaGAGAAGCAAGGTATGTCATTGGCATCTAGTGAGT | + |
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Preference number: 3 (lower is better) Translates to: FNNGDILGYHNW*RSKVCHWHLVS Trigger: ACTCACTAGATGCCAATGACATACCTTGCTTCTTCACCAGTTATGATAACCAAGAATGTCTCCATTGTTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| 3UTR CCA 72 bp | AAATTCATAGCCCAGGTTCTTGATCGGATGTTTCTGTaGACTTTTCTTTTCGTTTCAATTGTTGGATCTCTT | + |
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Preference number: 3 (lower is better) Translates to: KFIAQVLDRMFL*TFLFVSIVGSL Trigger: AAGAGATCCAACAATTGAAACGAAAAGAAAAGTCCACAGAAACATCCGATCAAGAACCTGGGCTATGAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| CDS-3UTR CCA 90 bp | AGAGGACCCTCACCAGACACCAAATTTGCTGGTGCCTTGACCTTGGACCTCCCACGCAGACCCCAGACCTaGAGCCGTGCGGGCGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: RGPSPDTKFAGALTLDLPRRPQT*SRAGGD Trigger: GTCTCCGCCCGCACGGCTCCAGGTCTGGGGTCTGCG...TGGGAGGTCCAAGGTCAAGGCACCAGCAAATTTGGTGTCTGGTGAGGGTCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR CCA 90 bp | GTGATTGTCTTAGATAGAAGGTGGGGCCTTGGAAAGGTGATTAGGCCATGGGGGCCGCTTCGCCGCCGCTaGGTTTCCAGCGCCCTCGGA | + |
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Preference number: 4 (lower is better) Translates to: VIVLDRRWGLGKVIRPWGPLRRR*VSSALG Trigger: TCCGAGGGCGCTGGAAACCCAGCGGCGGCGAAGCGG...CCCCCATGGCCTAATCACCTTTCCAAGGCCCCACCTTCTATCTAAGACAATCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR TCA 90 bp | AGAGGACCCTCACCAGACACCAAATTTGCTGGTGCCTTGACCTTGGACCTCCCAAGGGGCCTCGGCTTCTaGGCGTTGCCCTCGTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: RGPSPDTKFAGALTLDLPRGLGF*ALPSLL Trigger: AAGCAACGAGGGCAACGCTCAGAAGCCGAGGCCCCT...TGGGAGGTCCAAGGTCAAGGCACCAGCAAATTTGGTGTCTGGTGAGGGTCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR TCA 90 bp | TGTTGGATCTCTTGGGCTTTTTGTTCCTGTAATCCCAGCTACCTGGGAGGCTGCAGGGGCCTCGGCTTCTaGGCGTTGCCCTCGTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: CWISWAFCSCNPSYLGGCRGLGF*ALPSLL Trigger: AAGCAACGAGGGCAACGCTCAGAAGCCGAGGCCCCT...GCAGCCTCCCAGGTAGCTGGGATTACAGGAACAAAAAGCCCAAGAGATCCAACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| CDS-3UTR GCA 90 bp | AGAGGACCCTCACCAGACACCAAATTTGCTGGTGCCTTGACCTTGGACCTCCCACGCTCAAATAGACGGTaGTCAGCCTCTGAGGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: RGPSPDTKFAGALTLDLPRSNRR*SASEAL Trigger: CAGGGCCTCAGAGGCTGAGCACCGTCTATTTGAGCG...TGGGAGGTCCAAGGTCAAGGCACCAGCAAATTTGGTGTCTGGTGAGGGTCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR GCA 90 bp | GGATCTCTTGGGCTTTTTGTTCCTGTAATCCCAGCTACCTGGGAGGCTGCGGCAGCAGCCTTTGGACTCTaGGCGGCTGAAGCAATTCAG | + |
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Preference number: 4 (lower is better) Translates to: GSLGLFVPVIPATWEAAAAAFGL*AAEAIQ Trigger: CTGAATTGCTTCAGCCGCGCAGAGTCCAAAGGCTGC...TGCCGCAGCCTCCCAGGTAGCTGGGATTACAGGAACAAAAAGCCCAAGAGATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| CDS-3UTR GCA 90 bp | GGATCTCTTGGGCTTTTTGTTCCTGTAATCCCAGCTACCTGGGAGGCTGCGGCAGAAGCAGCCTCCTCCTaGCCTGACACAAGGAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: GSLGLFVPVIPATWEAAAEAASS*PDTRKS Trigger: AGACTTCCTTGTGTCAGGGCAGGAGGAGGCTGCTTC...TGCCGCAGCCTCCCAGGTAGCTGGGATTACAGGAACAAAAAGCCCAAGAGATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| CDS-3UTR TCA 90 bp | TGTTGGATCTCTTGGGCTTTTTGTTCCTGTAATCCCAGCTACCTGGGAGGCTGCGTGCAGGGACACGCATaGACTCTGCCCCACCATAGT | + |
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Preference number: 4 (lower is better) Translates to: CWISWAFCSCNPSYLGGCVQGHA*TLPHHS Trigger: ACTATGGTGGGGCAGAGTTCATGCGTGTCCCTGCAC...GCAGCCTCCCAGGTAGCTGGGATTACAGGAACAAAAAGCCCAAGAGATCCAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| CDS-3UTR CCA 90 bp | AGTCTCTGTGAATCATCTGTCAGTGGTGATGATCACGTTAAGTTTCAGAAGTGTAGAGCCCATGGCTGGTaGCCGGGCTGGCCGCGGACC | + |
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Preference number: 4 (lower is better) Translates to: SLCESSVSGDDHVKFQKCRAHGW*PGWPRT Trigger: GGTCCGCGGCCAGCCCGGCCACCAGCCATGGGCTCT...ACACTTCTGAAACTTAACGTGATCATCACCACTGACAGATGATTCACAGAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR CCA 90 bp | TTCATAGCCCAGGTTCTTGATCGGATGTTTCTGTGGACTTTTCTTTTCGTTTCAAGAGCCCATGGCTGGTaGCCGGGCTGGCCGCGGACC | + |
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Preference number: 4 (lower is better) Translates to: FIAQVLDRMFLWTFLFVSRAHGW*PGWPRT Trigger: GGTCCGCGGCCAGCCCGGCCACCAGCCATGGGCTCT...TGAAACGAAAAGAAAAGTCCACAGAAACATCCGATCAAGAACCTGGGCTATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| CDS-3UTR TCA 90 bp | AGAGGACCCTCACCAGACACCAAATTTGCTGGTGCCTTGACCTTGGACCTCCCAGAAGCAATTCAGATTTaGGAGCTCGGCACCGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: RGPSPDTKFAGALTLDLPEAIQI*ELGTVE Trigger: CTCTACGGTGCCGAGCTCTCAAATCTGAATTGCTTC...TGGGAGGTCCAAGGTCAAGGCACCAGCAAATTTGGTGTCTGGTGAGGGTCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR TCA 90 bp | GGATCTCTTGGGCTTTTTGTTCCTGTAATCCCAGCTACCTGGGAGGCTGCGGCAGAAGCAATTCAGATTTaGGAGCTCGGCACCGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: GSLGLFVPVIPATWEAAAEAIQI*ELGTVE Trigger: CTCTACGGTGCCGAGCTCTCAAATCTGAATTGCTTC...TGCCGCAGCCTCCCAGGTAGCTGGGATTACAGGAACAAAAAGCCCAAGAGATCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| CDS-3UTR GCA 90 bp | TGTTGGATCTCTTGGGCTTTTTGTTCCTGTAATCCCAGCTACCTGGGAGGCTGCGACACGCATGAACTCTaGCCCACCATAGTCAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: CWISWAFCSCNPSYLGGCDTHEL*PTIVRG Trigger: CCCTCTGACTATGGTGGGGCAGAGTTCATGCGTGTC...GCAGCCTCCCAGGTAGCTGGGATTACAGGAACAAAAAGCCCAAGAGATCCAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| CDS-3UTR GCA 90 bp | GTGATTGTCTTAGATAGAAGGTGGGGCCTTGGAAAGGTGATTAGGCCATGGGGGGCAGCCTTTGGACTCTaGGCGGCTGAAGCAATTCAG | + |
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Preference number: 4 (lower is better) Translates to: VIVLDRRWGLGKVIRPWGAAFGL*AAEAIQ Trigger: CTGAATTGCTTCAGCCGCGCAGAGTCCAAAGGCTGC...CCCCCATGGCCTAATCACCTTTCCAAGGCCCCACCTTCTATCTAAGACAATCAC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR CCA 90 bp | AGAGGACCCTCACCAGACACCAAATTTGCTGGTGCCTTGACCTTGGACCTCCCAGTCTTGTCGTCCACCTaGAAATCCCCAACAGCATTG | + |
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Preference number: 4 (lower is better) Translates to: RGPSPDTKFAGALTLDLPVLSST*KSPTAL Trigger: CAATGCTGTTGGGGATTTCCAGGTGGACGACAAGAC...TGGGAGGTCCAAGGTCAAGGCACCAGCAAATTTGGTGTCTGGTGAGGGTCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| 3UTR CAA 72 bp | AGAGGACCCTCACCAGACACCAAATTTGCTGGTGCCTaGACCTTGGACCTCCCAACCTCCAAAACTGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: RGPSPDTKFAGA*TLDLPTSKTEK Trigger: CTTCTCAGTTTTGGAGGTTGGGAGGTCCAAGGTCAAGGCACCAGCAAATTTGGTGTCTGGTGAGGGTCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR TCA 90 bp | TGTTGGATCTCTTGGGCTTTTTGTTCCTGTAATCCCAGCTACCTGGGAGGCTGCTCCACCTTCACCAGCTaGGACATGGACACCTCGAAA | + |
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Preference number: 4 (lower is better) Translates to: CWISWAFCSCNPSYLGGCSTFTS*DMDTSK Trigger: TTTCGAGGTGTCCATGTCTCAGCTGGTGAAGGTGGA...GCAGCCTCCCAGGTAGCTGGGATTACAGGAACAAAAAGCCCAAGAGATCCAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| CDS-3UTR GCA 90 bp | TGTTGGATCTCTTGGGCTTTTTGTTCCTGTAATCCCAGCTACCTGGGAGGCTGCCTGGCCATCAGGGGTTaGAGAAACAATCCTGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: CWISWAFCSCNPSYLGGCLAIRG*RNNPAV Trigger: GACAGCAGGATTGTTTCTGCAACCCCTGATGGCCAG...GCAGCCTCCCAGGTAGCTGGGATTACAGGAACAAAAAGCCCAAGAGATCCAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| CDS-3UTR CCA 90 bp | AGAGGACCCTCACCAGACACCAAATTTGCTGGTGCCTTGACCTTGGACCTCCCAATGGACACCTCGAAATaGATGATGACTGGGTCAGAC | + |
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Preference number: 4 (lower is better) Translates to: RGPSPDTKFAGALTLDLPMDTSK*MMTGSD Trigger: GTCTGACCCAGTCATCATCCATTTCGAGGTGTCCAT...TGGGAGGTCCAAGGTCAAGGCACCAGCAAATTTGGTGTCTGGTGAGGGTCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR TCA 90 bp | GTGATTGTCTTAGATAGAAGGTGGGGCCTTGGAAAGGTGATTAGGCCATGGGGGCCTCCCCAGTGTACTTaGGTAAGGCTTTGGTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VIVLDRRWGLGKVIRPWGPPQCT*VRLWSC Trigger: ACAAGACCAAAGCCTTACTCAAGTACACTGGGGAGG...CCCCCATGGCCTAATCACCTTTCCAAGGCCCCACCTTCTATCTAAGACAATCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000326828.6 |
||
| CDS-3UTR TCA 90 bp | TGTTGGATCTCTTGGGCTTTTTGTTCCTGTAATCCCAGCTACCTGGGAGGCTGCTCTCCCAATAGTCCTTaGGGTTCATGGAAGAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: CWISWAFCSCNPSYLGGCSPNSP*GSWKSR Trigger: TCGGCTCTTCCATGAACCTCAAGGACTATTGGGAGA...GCAGCCTCCCAGGTAGCTGGGATTACAGGAACAAAAAGCCCAAGAGATCCAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| CDS-3UTR TCA 90 bp | GTGGTCCAAATGTGTCCTCCCCCAATTCATATGTTGAAACCTATTCCCAGCGTGCTAGAAGGCACCCTTTaGGGAAGAGGACCCTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: VVQMCPPPIHMLKPIPSVLEGTL*GRGPSP Trigger: TGGTGAGGGTCCTCTTCCTCAAAGGGTGCCTTCTAG...CACGCTGGGAATAGGTTTCAACATATGAATTGGGGGAGGACACATTTGGACCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000326828.6 |
||
| CDS-3UTR GCA 90 bp | TGCTGTGGTCCAAATGTGTCCTCCCCCAATTCATATGTTGAAACCTATTCCCAGTCGGCTTCTGAGCGTTaGCCTCGTTGCTTGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CCGPNVSSPNSYVETYSQSASER*PRCLLA Trigger: GGCCAACAAGCAACGAGGGCAACGCTCAGAAGCCGA...CTGGGAATAGGTTTCAACATATGAATTGGGGGAGGACACATTTGGACCACAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR CCA 90 bp | TGTTGGATCTCTTGGGCTTTTTGTTCCTGTAATCCCAGCTACCTGGGAGGCTGCGTCTTGTCGTCCACCTaGAAATCCCCAACAGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: CWISWAFCSCNPSYLGGCVLSST*KSPTAL Trigger: CAATGCTGTTGGGGATTTCCAGGTGGACGACAAGAC...GCAGCCTCCCAGGTAGCTGGGATTACAGGAACAAAAAGCCCAAGAGATCCAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| CDS-3UTR CCA 90 bp | GTGATTGTCTTAGATAGAAGGTGGGGCCTTGGAAAGGTGATTAGGCCATGGGGGCTTATGCATCTTCCCTaGCCATCAGGGGTTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VIVLDRRWGLGKVIRPWGLMHLP*PSGVAE Trigger: TTCTGCAACCCCTGATGGCCAGGGAAGATGCATAAG...CCCCCATGGCCTAATCACCTTTCCAAGGCCCCACCTTCTATCTAAGACAATCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000326828.6 |
||
| 3UTR CAA 72 bp | CCCTCACCAGACACCAAATTTGCTGGTGCCTTGACCTaGGACCTCCCAACCTCCAAAACTGAGAAGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSPDTKFAGALT*DLPTSKTEKFL Trigger: CAGAAACTTCTCAGTTTTGGAGGTTGGGAGGTCCAAGGTCAAGGCACCAGCAAATTTGGTGTCTGGTGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR TCA 90 bp | GTGGTCCAAATGTGTCCTCCCCCAATTCATATGTTGAAACCTATTCCCAGCGTGAAGGGATGGTCTCAGTaGTCACCAGGAGAAACACCG | + |
|
Preference number: 4 (lower is better) Translates to: VVQMCPPPIHMLKPIPSVKGWSQ*SPGETP Trigger: CGGTGTTTCTCCTGGTGATCACTGAGACCATCCCTT...CACGCTGGGAATAGGTTTCAACATATGAATTGGGGGAGGACACATTTGGACCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000326828.6 |
||
| CDS-3UTR GCA 90 bp | ACCAGGGGCAATTTTGCTCCTAAGGGAACATTTAACAATGGAGACATTCTTGGTAGGGGTAGCCCTCCTTaGAGCCTTTGGACTCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TRGNFAPKGTFNNGDILGRGSPP*SLWTLR Trigger: GCGCAGAGTCCAAAGGCTGCAAGGAGGGCTACCCCT...ACCAAGAATGTCTCCATTGTTAAATGTTCCCTTAGGAGCAAAATTGCCCCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR GCA 90 bp | TCTTTTCGTTTCAATTGTTGGATCTCTTGGGCTTTTTGTTCCTGTAATCCCAGCCCAGGTGGCGGAGGTTaGGGTGAGCTGAGATCACGC | + |
|
Preference number: 4 (lower is better) Translates to: SFRFNCWISWAFCSCNPSPGGGG*GELRSR Trigger: GCGTGATCTCAGCTCACCGCAACCTCCGCCACCTGG...GCTGGGATTACAGGAACAAAAAGCCCAAGAGATCCAACAATTGAAACGAAAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000559658.5 |
||
| CDS-3UTR CCA 90 bp | CTAAAGCAATGTTTCTCAACCAGGGGCAATTTTGCTCCTAAGGGAACATTTAACCAGCCTCTGAGGCCCTaGCCACTGGCAGCAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: LKQCFSTRGNFAPKGTFNQPLRP*PLAAET Trigger: TGTCTCTGCTGCCAGTGGCCAGGGCCTCAGAGGCTG...GTTAAATGTTCCCTTAGGAGCAAAATTGCCCCTGGTTGAGAAACATTGCTTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000326828.6 |
||
| CDS-3UTR TCA 90 bp | TGTTGGATCTCTTGGGCTTTTTGTTCCTGTAATCCCAGCTACCTGGGAGGCTGCTGGCTACAGGCCGGATaGTCTCATTGTAATCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: CWISWAFCSCNPSYLGGCWLQAG*SHCNLQ Trigger: TTGAAGATTACAATGAGATCATCCGGCCTGTAGCCA...GCAGCCTCCCAGGTAGCTGGGATTACAGGAACAAAAAGCCCAAGAGATCCAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000559658.5 |
||
| CDS-3UTR TCA 90 bp | GTGATTGTCTTAGATAGAAGGTGGGGCCTTGGAAAGGTGATTAGGCCATGGGGGGAATGCACACCAGGGTaGAAACCCACAGAAAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: VIVLDRRWGLGKVIRPWGECTPG*KPTEKY Trigger: GTATTTTTCTGTGGGTTTTCACCCTGGTGTGCATTC...CCCCCATGGCCTAATCACCTTTCCAAGGCCCCACCTTCTATCTAAGACAATCAC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000326828.6 |
||
| CDS-3UTR TCA 90 bp | AAGAGGACCCTCACCAGACACCAAATTTGCTGGTGCCTTGACCTTGGACCTCCCACGATGGGGGATTGCTaGATTAGTATAAACCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KRTLTRHQICWCLDLGPPTMGDC*ISINLQ Trigger: TTGAAGGTTTATACTAATTCAGCAATCCCCCATCGT...GGGAGGTCCAAGGTCAAGGCACCAGCAAATTTGGTGTCTGGTGAGGGTCCTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000326828.6 |
||
| CDS-3UTR GCA 90 bp | GTTGAAGATTGGAAATTCATAGCCCAGGTTCTTGATCGGATGTTTCTGTGGACTCGCTCAAATAGACGGTaGTCAGCCTCTGAGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VEDWKFIAQVLDRMFLWTRSNRR*SASEAL Trigger: CAGGGCCTCAGAGGCTGAGCACCGTCTATTTGAGCG...AGTCCACAGAAACATCCGATCAAGAACCTGGGCTATGAATTTCCAATCTTCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559658.5 |
||
| CDS-3UTR GCA 90 bp | TTCATAGCCCAGGTTCTTGATCGGATGTTTCTGTGGACTTTTCTTTTCGTTTCAAGGGGTAGCCCTCCTTaGAGCCTTTGGACTCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FIAQVLDRMFLWTFLFVSRGSPP*SLWTLR Trigger: GCGCAGAGTCCAAAGGCTGCAAGGAGGGCTACCCCT...TGAAACGAAAAGAAAAGTCCACAGAAACATCCGATCAAGAACCTGGGCTATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| CDS-3UTR CCA 90 bp | GGTACTGCTAAAGATCCTACAATGCACAGGATACCCCCATTCTGTACCAACACAGTCGTGTTTGTAGCCTaGGGCTTTGATGATGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTAKDPTMHRIPPFCTNTVVFVA*GFDDGP Trigger: TGGGCCATCATCAAAGCCCCAGGCTACAAACACGAC...TGTGTTGGTACAGAATGGGGGTATCCTGTGCATTGTAGGATCTTTAGCAGTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR CCA 90 bp | GTGGTCCAAATGTGTCCTCCCCCAATTCATATGTTGAAACCTATTCCCAGCGTGAAGGTGATTAGGCCATaGGGGCTCTGCTCTCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: VVQMCPPPIHMLKPIPSVKVIRP*GLCSHE Trigger: TTCATGAGAGCAGAGCCCCCATGGCCTAATCACCTT...CACGCTGGGAATAGGTTTCAACATATGAATTGGGGGAGGACACATTTGGACCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR TCA 90 bp | CTAAAGCAATGTTTCTCAACCAGGGGCAATTTTGCTCCTAAGGGAACATTTAACGTGCAGGGACACGCATaGACTCTGCCCCACCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: LKQCFSTRGNFAPKGTFNVQGHA*TLPHHS Trigger: ACTATGGTGGGGCAGAGTTCATGCGTGTCCCTGCAC...GTTAAATGTTCCCTTAGGAGCAAAATTGCCCCTGGTTGAGAAACATTGCTTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000326828.6 |
||
| CDS-3UTR TCA 90 bp | GGTACTGCTAAAGATCCTACAATGCACAGGATACCCCCATTCTGTACCAACACATCTCCCAATAGTCCTTaGGGTTCATGGAAGAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GTAKDPTMHRIPPFCTNTSPNSP*GSWKSR Trigger: TCGGCTCTTCCATGAACCTCAAGGACTATTGGGAGA...TGTGTTGGTACAGAATGGGGGTATCCTGTGCATTGTAGGATCTTTAGCAGTACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR GCA 90 bp | TTCATAGCCCAGGTTCTTGATCGGATGTTTCTGTGGACTTTTCTTTTCGTTTCATCGGCTTCTGAGCGTTaGCCTCGTTGCTTGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FIAQVLDRMFLWTFLFVSSASER*PRCLLA Trigger: GGCCAACAAGCAACGAGGGCAACGCTCAGAAGCCGA...TGAAACGAAAAGAAAAGTCCACAGAAACATCCGATCAAGAACCTGGGCTATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559658.5 |
||
| CDS-3UTR GCA 90 bp | CTAAAGCAATGTTTCTCAACCAGGGGCAATTTTGCTCCTAAGGGAACATTTAACGACACGCATGAACTCTaGCCCACCATAGTCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LKQCFSTRGNFAPKGTFNDTHEL*PTIVRG Trigger: CCCTCTGACTATGGTGGGGCAGAGTTCATGCGTGTC...GTTAAATGTTCCCTTAGGAGCAAAATTGCCCCTGGTTGAGAAACATTGCTTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR GCA 90 bp | TGCTGTGGTCCAAATGTGTCCTCCCCCAATTCATATGTTGAAACCTATTCCCAGTGGAGATTTTTATCCTaGGGTGGTGGCAGTAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: CCGPNVSSPNSYVETYSQWRFLS*GGGSNH Trigger: GTGGTTACTGCCACCACCGCAGGATAAAAATCTCCA...CTGGGAATAGGTTTCAACATATGAATTGGGGGAGGACACATTTGGACCACAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR CCA 90 bp | GGATCTCTTGGGCTTTTTGTTCCTGTAATCCCAGCTACCTGGGAGGCTGCGGCATTTCGTTTCAATTGTTaGATCTCTTGGGCTTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSLGLFVPVIPATWEAAAFRFNC*ISWAFC Trigger: ACAAAAAGCCCAAGAGATCCAACAATTGAAACGAAA...TGCCGCAGCCTCCCAGGTAGCTGGGATTACAGGAACAAAAAGCCCAAGAGATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| CDS-3UTR TCA 90 bp | TGCTGTGGTCCAAATGTGTCCTCCCCCAATTCATATGTTGAAACCTATTCCCAGTGGCTACAGGCCGGATaGTCTCATTGTAATCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: CCGPNVSSPNSYVETYSQWLQAG*SHCNLQ Trigger: TTGAAGATTACAATGAGATCATCCGGCCTGTAGCCA...CTGGGAATAGGTTTCAACATATGAATTGGGGGAGGACACATTTGGACCACAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR TCA 90 bp | TCTTTTCGTTTCAATTGTTGGATCTCTTGGGCTTTTTGTTCCTGTAATCCCAGCAAGGGATGGTCTCAGTaGTCACCAGGAGAAACACCG | + |
|
Preference number: 4 (lower is better) Translates to: SFRFNCWISWAFCSCNPSKGWSQ*SPGETP Trigger: CGGTGTTTCTCCTGGTGATCACTGAGACCATCCCTT...GCTGGGATTACAGGAACAAAAAGCCCAAGAGATCCAACAATTGAAACGAAAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| CDS-3UTR TCA 90 bp | ACCAGGGGCAATTTTGCTCCTAAGGGAACATTTAACAATGGAGACATTCTTGGTTGGACTCTGCGCGGCTaGAGCAATTCAGATTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TRGNFAPKGTFNNGDILGWTLRG*SNSDLR Trigger: TCTCAAATCTGAATTGCTTCAGCCGCGCAGAGTCCA...ACCAAGAATGTCTCCATTGTTAAATGTTCCCTTAGGAGCAAAATTGCCCCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR TCA 90 bp | CTAAAGCAATGTTTCTCAACCAGGGGCAATTTTGCTCCTAAGGGAACATTTAACAATTTGCTGGTGCCTTaGCCTTGGACCTCCCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: LKQCFSTRGNFAPKGTFNNLLVP*PWTSQP Trigger: AGGTTGGGAGGTCCAAGGTCAAGGCACCAGCAAATT...GTTAAATGTTCCCTTAGGAGCAAAATTGCCCCTGGTTGAGAAACATTGCTTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR GCA 90 bp | ACCAGGGGCAATTTTGCTCCTAAGGGAACATTTAACAATGGAGACATTCTTGGTCTTCCAGATCTTCTGTaGAGGGACACGCATGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: TRGNFAPKGTFNNGDILGLPDLL*RDTHEL Trigger: GAGTTCATGCGTGTCCCTGCACAGAAGATCTGGAAG...ACCAAGAATGTCTCCATTGTTAAATGTTCCCTTAGGAGCAAAATTGCCCCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR GCA 90 bp | ACCAGGGGCAATTTTGCTCCTAAGGGAACATTTAACAATGGAGACATTCTTGGTAGAGGAGGACAGAAATaGACAGGGTCACCTTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TRGNFAPKGTFNNGDILGRGGQK*TGSPSH Trigger: GTGAGAAGGTGACCCTGTGCATTTCTGTCCTCCTCT...ACCAAGAATGTCTCCATTGTTAAATGTTCCCTTAGGAGCAAAATTGCCCCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR CCA 90 bp | TTCATAGCCCAGGTTCTTGATCGGATGTTTCTGTGGACTTTTCTTTTCGTTTCAGTCGTGTTTGTAGCCTaGGGCTTTGATGATGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FIAQVLDRMFLWTFLFVSVVFVA*GFDDGP Trigger: TGGGCCATCATCAAAGCCCCAGGCTACAAACACGAC...TGAAACGAAAAGAAAAGTCCACAGAAACATCCGATCAAGAACCTGGGCTATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| CDS-3UTR CCA 90 bp | TCTTTTCGTTTCAATTGTTGGATCTCTTGGGCTTTTTGTTCCTGTAATCCCAGCGCCCTCGTTGCTTGTTaGCCTGGTCATGAACATGAC | + |
|
Preference number: 4 (lower is better) Translates to: SFRFNCWISWAFCSCNPSALVAC*PGHEHD Trigger: GTCATGTTCATGACCAGGCCAACAAGCAACGAGGGC...GCTGGGATTACAGGAACAAAAAGCCCAAGAGATCCAACAATTGAAACGAAAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| CDS-3UTR TCA 90 bp | CTAAAGCAATGTTTCTCAACCAGGGGCAATTTTGCTCCTAAGGGAACATTTAACCATTCCAGATTTGCTTaGGCCACAGGTTGGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKQCFSTRGNFAPKGTFNHSRFA*ATGWSP Trigger: TGGAGACCAACCTGTGGCTCAAGCAAATCTGGAATG...GTTAAATGTTCCCTTAGGAGCAAAATTGCCCCTGGTTGAGAAACATTGCTTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR TCA 90 bp | TCTTTTCGTTTCAATTGTTGGATCTCTTGGGCTTTTTGTTCCTGTAATCCCAGCTGTACAGCGAGTATGTaGTGTCGGGGTAGATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SFRFNCWISWAFCSCNPSCTASM*CRGRSP Trigger: AGGAGATCTACCCCGACATCACATACTCGCTGTACA...GCTGGGATTACAGGAACAAAAAGCCCAAGAGATCCAACAATTGAAACGAAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| CDS-3UTR TCA 90 bp | TCTTTTCGTTTCAATTGTTGGATCTCTTGGGCTTTTTGTTCCTGTAATCCCAGCCATAGCCCAGGTTCTTaGTCGGATGTTTCTGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SFRFNCWISWAFCSCNPSHSPGS*SDVSVD Trigger: GTCCACAGAAACATCCGATCAAGAACCTGGGCTATG...GCTGGGATTACAGGAACAAAAAGCCCAAGAGATCCAACAATTGAAACGAAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| CDS-3UTR GCA 90 bp | ACCTCCAAAACTGAGAAGTTTCTGTTGTTTATAATCCACCCAGTTTATGGTGTAGAAGCAGCCTCCTCCTaGCCTGACACAAGGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSKTEKFLLFIIHPVYGVEAASS*PDTRKS Trigger: AGACTTCCTTGTGTCAGGGCAGGAGGAGGCTGCTTC...TACACCATAAACTGGGTGGATTATAAACAACAGAAACTTCTCAGTTTTGGAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR CCA 90 bp | ACCAGGGGCAATTTTGCTCCTAAGGGAACATTTAACAATGGAGACATTCTTGGTGAAATGGATGATGACTaGGTCAGACACGTTGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: TRGNFAPKGTFNNGDILGEMDDD*VRHVGY Trigger: GTAGCCAACGTGTCTGACCCAGTCATCATCCATTTC...ACCAAGAATGTCTCCATTGTTAAATGTTCCCTTAGGAGCAAAATTGCCCCTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR CCA 90 bp | TTCATAGCCCAGGTTCTTGATCGGATGTTTCTGTGGACTTTTCTTTTCGTTTCACTTATGCATCTTCCCTaGCCATCAGGGGTTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FIAQVLDRMFLWTFLFVSLMHLP*PSGVAE Trigger: TTCTGCAACCCCTGATGGCCAGGGAAGATGCATAAG...TGAAACGAAAAGAAAAGTCCACAGAAACATCCGATCAAGAACCTGGGCTATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000559658.5 |
||
| 3UTR CAA 72 bp | GCTGTGGTCCAAATGTGTCCTCCCCCAATTCATATGTaGAAACCTATTCCCAGCGTGATTGTCTTAGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: AVVQMCPPPIHM*KPIPSVIVLDR Trigger: TCTATCTAAGACAATCACGCTGGGAATAGGTTTCAACATATGAATTGGGGGAGGACACATTTGGACCACAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000326828.6 |
||
| CDS-3UTR TCA 90 bp | AGGGAACATTTAACAATGGAGACATTCTTGGTTATCATAACTGGTGAAGAAGCATCCACCTTCACCAGCTaGGACATGGACACCTCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: REHLTMETFLVIITGEEASTFTS*DMDTSK Trigger: TTTCGAGGTGTCCATGTCTCAGCTGGTGAAGGTGGA...TGCTTCTTCACCAGTTATGATAACCAAGAATGTCTCCATTGTTAAATGTTCCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326828.6 |
||
| CDS-3UTR TCA 90 bp | ATAGCCCAGGTTCTTGATCGGATGTTTCTGTGGACTTTTCTTTTCGTTTCAATTCCTCCCCAGTGTACTTaGGTAAGGCTTTGGTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IAQVLDRMFLWTFLFVSIPPQCT*VRLWSC Trigger: ACAAGACCAAAGCCTTACTCAAGTACACTGGGGAGG...AATTGAAACGAAAAGAAAAGTCCACAGAAACATCCGATCAAGAACCTGGGCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000559658.5 |
||
| CDS-3UTR TCA 90 bp | GTTGAAGATTGGAAATTCATAGCCCAGGTTCTTGATCGGATGTTTCTGTGGACTGAATGCACACCAGGGTaGAAACCCACAGAAAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: VEDWKFIAQVLDRMFLWTECTPG*KPTEKY Trigger: GTATTTTTCTGTGGGTTTTCACCCTGGTGTGCATTC...AGTCCACAGAAACATCCGATCAAGAACCTGGGCTATGAATTTCCAATCTTCAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000559658.5 |
||
| CDS-3UTR TCA 90 bp | GGTACTGCTAAAGATCCTACAATGCACAGGATACCCCCATTCTGTACCAACACACCCAACCTCCAAAACTaGGAAGTTTCTGTTGTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: GTAKDPTMHRIPPFCTNTPNLQN*EVSVVY Trigger: ATAAACAACAGAAACTTCTCAGTTTTGGAGGTTGGG...TGTGTTGGTACAGAATGGGGGTATCCTGTGCATTGTAGGATCTTTAGCAGTACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000326828.6 |
||
| CDS-3UTR GCA 90 bp | TTCATAGCCCAGGTTCTTGATCGGATGTTTCTGTGGACTTTTCTTTTCGTTTCATGGAGATTTTTATCCTaGGGTGGTGGCAGTAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: FIAQVLDRMFLWTFLFVSWRFLS*GGGSNH Trigger: GTGGTTACTGCCACCACCGCAGGATAAAAATCTCCA...TGAAACGAAAAGAAAAGTCCACAGAAACATCCGATCAAGAACCTGGGCTATGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000559658.5 |
||
| CDS-3UTR GCA 90 bp | AGGGAACATTTAACAATGGAGACATTCTTGGTTATCATAACTGGTGAAGAAGCACTGGCCATCAGGGGTTaGAGAAACAATCCTGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: REHLTMETFLVIITGEEALAIRG*RNNPAV Trigger: GACAGCAGGATTGTTTCTGCAACCCCTGATGGCCAG...TGCTTCTTCACCAGTTATGATAACCAAGAATGTCTCCATTGTTAAATGTTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326828.6 |
||
| CDS-3UTR CCA 90 bp | TCTTTTCGTTTCAATTGTTGGATCTCTTGGGCTTTTTGTTCCTGTAATCCCAGCGAAATGGATGATGACTaGGTCAGACACGTTGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: SFRFNCWISWAFCSCNPSEMDDD*VRHVGY Trigger: GTAGCCAACGTGTCTGACCCAGTCATCATCCATTTC...GCTGGGATTACAGGAACAAAAAGCCCAAGAGATCCAACAATTGAAACGAAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000559658.5 |
||
| CDS-3UTR CCA 90 bp | TTCATAGCCCAGGTTCTTGATCGGATGTTTCTGTGGACTTTTCTTTTCGTTTCAATGGACACCTCGAAATaGATGATGACTGGGTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FIAQVLDRMFLWTFLFVSMDTSK*MMTGSD Trigger: GTCTGACCCAGTCATCATCCATTTCGAGGTGTCCAT...TGAAACGAAAAGAAAAGTCCACAGAAACATCCGATCAAGAACCTGGGCTATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| CDS-3UTR CCA 90 bp | AGGGAACATTTAACAATGGAGACATTCTTGGTTATCATAACTGGTGAAGAAGCAGCCCTCGTTGCTTGTTaGCCTGGTCATGAACATGAC | + |
|
Preference number: 4 (lower is better) Translates to: REHLTMETFLVIITGEEAALVAC*PGHEHD Trigger: GTCATGTTCATGACCAGGCCAACAAGCAACGAGGGC...TGCTTCTTCACCAGTTATGATAACCAAGAATGTCTCCATTGTTAAATGTTCCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR TCA 90 bp | AGGGAACATTTAACAATGGAGACATTCTTGGTTATCATAACTGGTGAAGAAGCATGTACAGCGAGTATGTaGTGTCGGGGTAGATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: REHLTMETFLVIITGEEACTASM*CRGRSP Trigger: AGGAGATCTACCCCGACATCACATACTCGCTGTACA...TGCTTCTTCACCAGTTATGATAACCAAGAATGTCTCCATTGTTAAATGTTCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR TCA 90 bp | TTGATCGGATGTTTCTGTGGACTTTTCTTTTCGTTTCAATTGTTGGATCTCTTGTGGACTCTGCGCGGCTaGAGCAATTCAGATTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LIGCFCGLFFSFQLLDLLWTLRG*SNSDLR Trigger: TCTCAAATCTGAATTGCTTCAGCCGCGCAGAGTCCA...CAAGAGATCCAACAATTGAAACGAAAAGAAAAGTCCACAGAAACATCCGATCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| CDS-3UTR GCA 90 bp | TTGATCGGATGTTTCTGTGGACTTTTCTTTTCGTTTCAATTGTTGGATCTCTTGAGAGGAGGACAGAAATaGACAGGGTCACCTTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LIGCFCGLFFSFQLLDLLRGGQK*TGSPSH Trigger: GTGAGAAGGTGACCCTGTGCATTTCTGTCCTCCTCT...CAAGAGATCCAACAATTGAAACGAAAAGAAAAGTCCACAGAAACATCCGATCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| CDS-3UTR TCA 90 bp | ACCTCCAAAACTGAGAAGTTTCTGTTGTTTATAATCCACCCAGTTTATGGTGTAGTAGTTGAAGCTCTCTaGAATGGAGGCATAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TSKTEKFLLFIIHPVYGVVVEAL*NGGIAL Trigger: AAGGGCTATGCCTCCATTTCAGAGAGCTTCAACTAC...TACACCATAAACTGGGTGGATTATAAACAACAGAAACTTCTCAGTTTTGGAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR GCA 90 bp | ACCTCCAAAACTGAGAAGTTTCTGTTGTTTATAATCCACCCAGTTTATGGTGTAACCAGACACCAAATTTaGTGGTGCCTTGACCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSKTEKFLLFIIHPVYGVTRHQI*WCLDLG Trigger: TCCAAGGTCAAGGCACCAGCAAATTTGGTGTCTGGT...TACACCATAAACTGGGTGGATTATAAACAACAGAAACTTCTCAGTTTTGGAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR TCA 90 bp | ACCTCCAAAACTGAGAAGTTTCTGTTGTTTATAATCCACCCAGTTTATGGTGTATGCAAGAGAAGTAGTTaGAGCTCTCTGAAATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSKTEKFLLFIIHPVYGVCKRSS*SSLKWR Trigger: CCTCCATTTCAGAGAGCTTCAACTACTTCTCTTGCA...TACACCATAAACTGGGTGGATTATAAACAACAGAAACTTCTCAGTTTTGGAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR TCA 90 bp | TCTTTTCGTTTCAATTGTTGGATCTCTTGGGCTTTTTGTTCCTGTAATCCCAGCTTCCTAACAGGTTGTTaGAGATTGGAAATTCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFRFNCWISWAFCSCNPSFLTGC*RLEIHS Trigger: GCTATGAATTTCCAATCTTCAACAACCTGTTAGGAA...GCTGGGATTACAGGAACAAAAAGCCCAAGAGATCCAACAATTGAAACGAAAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| CDS-3UTR CCA 90 bp | CTAAAGCAATGTTTCTCAACCAGGGGCAATTTTGCTCCTAAGGGAACATTTAACAGGAACCGAACTTCATaGTACAGTTTTGGTAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LKQCFSTRGNFAPKGTFNRNRTS*YSFGNQ Trigger: TTGATTACCAAAACTGTACCATGAAGTTCGGTTCCT...GTTAAATGTTCCCTTAGGAGCAAAATTGCCCCTGGTTGAGAAACATTGCTTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| 3UTR CAA 72 bp | TTGCTCCTAAGGGAACATTTAACAATGGAGACATTCTaGGTTATCATAACTGGTGAAGAAGCAAGGTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLREHLTMETF*VIITGEEARYV Trigger: GACATACCTTGCTTCTTCACCAGTTATGATAACCAAGAATGTCTCCATTGTTAAATGTTCCCTTAGGAGCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR CCA 90 bp | TTGATCGGATGTTTCTGTGGACTTTTCTTTTCGTTTCAATTGTTGGATCTCTTGAGGAACCGAACTTCATaGTACAGTTTTGGTAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LIGCFCGLFFSFQLLDLLRNRTS*YSFGNQ Trigger: TTGATTACCAAAACTGTACCATGAAGTTCGGTTCCT...CAAGAGATCCAACAATTGAAACGAAAAGAAAAGTCCACAGAAACATCCGATCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| 3UTR CAA 72 bp | AGTTTCAGAAGTGTAGTACATGATACTCTTAACAATTaGTCTAAAGCAATGTTTCTCAACCAGGGGCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: SFRSVVHDTLNN*SKAMFLNQGQF Trigger: AAATTGCCCCTGGTTGAGAAACATTGCTTTAGACAAATTGTTAAGAGTATCATGTACTACACTTCTGAAACT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS CCA 90 bp | CAGGGGCAGCGAGAGCGGGCCAGAGCCCATGGCTGGTGGCCGGGCTaGCCGCGGACCCGGACGGTCGGGAGCGGGCGCGGCGGTCGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: QGQRERARAHGWWPG*PRTRTVGSGRGGRR Trigger: TCTGCGACCGCCGCGCCCGCTCCCGACCGTCCGGGTCCGCGGCCAGCCCGGCCACCAGCCATGGGCTCTGGCCCGCTCTCGCTGCCCCTG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000326828.6 ENST00000348639.7 ENST00000559658.5 |
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| CDS TCA 90 bp | TTTCCAGCGCCCTCGGACCCGCGGGAGGACAGGAACCATCCGGAGTaGAGCTGCGCCAGGCGCGGGCGGGCGGGCGGGCGTGCGCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: FPAPSDPREDRNHPE*SCARRGRAGGRARG Trigger: GCCCCGCGCACGCCCGCCCGCCCGCCCGCGCCTGGCGCAGCTTCACTCCGGATGGTTCCTGTCCTCCCGCGGGTCCGAGGGCGCTGGAAA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000348639.7 |
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| CDS CCA 90 bp | CGTGCGGGCGGAGACGCGCGGGGCTCCTCTCCGCTTCGCCGCCGCTaGGTTTCCAGCGCCCTCGGACCCGCGGGAGGACAGGAACCATCC | + |
|
Preference number: 5 (lower is better) Translates to: RAGGDARGSSPLRRR*VSSALGPAGGQEPS Trigger: GGATGGTTCCTGTCCTCCCGCGGGTCCGAGGGCGCTGGAAACCCAGCGGCGGCGAAGCGGAGAGGAGCCCCGCGCGTCTCCGCCCGCACG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326828.6 ENST00000348639.7 |
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| CDS GCA 90 bp | TCCCAGTCCCCAGCGCCGGGCGAGCTCCTTCTCCGCCGGGCTGGGTaGTCCGGCCGGCGGCGTCCGACCAGATCTGAGCAGGTGCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SQSPAPGELLLRRAG*SGRRRPTRSEQVLS Trigger: TGACAGCACCTGCTCAGATCTGGTCGGACGCCGCCGGCCGGAGCACCCAGCCCGGCGGAGAAGGAGCTCGCCCGGCGCTGGGGACTGGGA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000348639.7 |
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| CDS GCA 90 bp | ACGACAGACCGCCGGCCTGGGCCCTCCAGGAATTCCCTGCAGCCTTaGCCGGTCCCCGACTCTCGCTACCCACCAGCCCTCCCAGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: TTDRRPGPSRNSLQP*PVPDSRYPPALPGT Trigger: GGTGCCTGGGAGGGCTGGTGGGTAGCGAGAGTCGGGGACCGGGCAAGGCTGCAGGGAATTCCTGGAGGGCCCAGGCCGGCGGTCTGTCGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559941.1 |
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| CDS GCA 90 bp | ACAGCCGCACGACAGACCGCCGGCCTGGGCCCTCCAGGAATTCCCTaGAGCCTTGCCCGGTCCCCGACTCTCGCTACCCACCAGCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TAARQTAGLGPPGIP*SLARSPTLATHQPS Trigger: GGAGGGCTGGTGGGTAGCGAGAGTCGGGGACCGGGCAAGGCTGCAGGGAATTCCTGGAGGGCCCAGGCCGGCGGTCTGTCGTGCGGCTGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559941.1 |
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| CDS CCA 90 bp | GCGGAAAGCGCTCTGAGCTCACAGCCGCACGACAGACCGCCGGCCTaGGCCCTCCAGGAATTCCCTGCAGCCTTGCCCGGTCCCCGACTC | + |
|
Preference number: 5 (lower is better) Translates to: AESALSSQPHDRPPA*ALQEFPAALPGPRL Trigger: GAGTCGGGGACCGGGCAAGGCTGCAGGGAATTCCTGGAGGGCCCAGGCCGGCGGTCTGTCGTGCGGCTGTGAGCTCAGAGCGCTTTCCGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559941.1 |
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| CDS CCA 90 bp | CTTCAAACAGCCGCTCAAATAGACGGTGCTCAGCCTCTGAGGCCCTaGCCACTGGCAGCAGAGACAGCAGCAGCAGCAGCAGCAGCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: LQTAAQIDGAQPLRP*PLAAETAAAAAAAA Trigger: CGCGGCTGCTGCTGCTGCTGCTGCTGTCTCTGCTGCCAGTGGCCAGGGCCTCAGAGGCTGAGCACCGTCTATTTGAGCGGCTGTTTGAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000326828.6 ENST00000348639.7 ENST00000559658.5 ENST00000561128.1 |
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| CDS TCA 90 bp | CTCCTTGCAGCCTTTGGACTCTGCGCGGCTGAAGCAATTCAGATTTaGGAGCTCGGCACCGTAGAGGGGCCTCGGCTTCTGAGCGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLAAFGLCAAEAIQI*ELGTVEGPRLLSVA Trigger: GGCAACGCTCAGAAGCCGAGGCCCCTCTACGGTGCCGAGCTCTCAAATCTGAATTGCTTCAGCCGCGCAGAGTCCAAAGGCTGCAAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000326828.6 ENST00000348639.7 ENST00000559658.5 |
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| CDS-3UTR CAA 90 bp | GGATCTCTTGGGCTTTTTGTTCCTGTAATCCCAGCTACCTGGGAGGCTGCGGCACCCTCCTTGCAGCCTTaGGACTCTGCGCGGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GSLGLFVPVIPATWEAAAPSLQP*DSARLK Trigger: CTTCAGCCGCGCAGAGTCCAAAGGCTGCAAGGAGGG...TGCCGCAGCCTCCCAGGTAGCTGGGATTACAGGAACAAAAAGCCCAAGAGATCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| CDS CCA 90 bp | ACCGTAGAGGGGCCTCGGCTTCTGAGCGTTGCCCTCGTTGCTTGTTaGCCTGGTCATGAACATGACCCTGGGGAGCAGGTTCAAGAATAC | + |
|
Preference number: 5 (lower is better) Translates to: TVEGPRLLSVALVAC*PGHEHDPGEQVQEY Trigger: GTATTCTTGAACCTGCTCCCCAGGGTCATGTTCATGACCAGGCCAACAAGCAACGAGGGCAACGCTCAGAAGCCGAGGCCCCTCTACGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000326828.6 ENST00000348639.7 ENST00000559658.5 |
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| CDS TCA 90 bp | GATCACGCCATTGCACTCCAGCTAGGAAGCAGCCTCCTCCTGCCCTaGCACAAGGAAGTCTCCCAGGCAGGCACACAGCTTAGTGCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: DHAIALQLGSSLLLP*HKEVSQAGTQLSAY Trigger: ATAAGCACTAAGCTGTGTGCCTGCCTGGGAGACTTCCTTGTGTCAGGGCAGGAGGAGGCTGCTTCCTAGCTGGAGTGCAATGGCGTGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| CDS-3UTR CAA 90 bp | AGAGGACCCTCACCAGACACCAAATTTGCTGGTGCCTTGACCTTGGACCTCCCAGCTAGAAGGCACCCTTaGAGGAAGAGGACCCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: RGPSPDTKFAGALTLDLPARRHP*RKRTLT Trigger: GGTGAGGGTCCTCTTCCTCAAAGGGTGCCTTCTAGC...TGGGAGGTCCAAGGTCAAGGCACCAGCAAATTTGGTGTCTGGTGAGGGTCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR CAA 90 bp | AGAGGACCCTCACCAGACACCAAATTTGCTGGTGCCTTGACCTTGGACCTCCCACCTGGCCATCAGGGGTaGCAGAAACAATCCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RGPSPDTKFAGALTLDLPPGHQG*QKQSCC Trigger: ACAGCAGGATTGTTTCTGCAACCCCTGATGGCCAGG...TGGGAGGTCCAAGGTCAAGGCACCAGCAAATTTGGTGTCTGGTGAGGGTCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR CAA 90 bp | TGTTGGATCTCTTGGGCTTTTTGTTCCTGTAATCCCAGCTACCTGGGAGGCTGCTCACCCATGAGGGCATaGTGTGTGTCGTCGGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: CWISWAFCSCNPSYLGGCSPMRA*CVSSGF Trigger: GAACCCCGACGACACACACAATGCCCTCATGGGTGA...GCAGCCTCCCAGGTAGCTGGGATTACAGGAACAAAAAGCCCAAGAGATCCAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| CDS TCA 90 bp | GGATCTCTTGGGCTTTTTGTTCTAGGAAGCAGCCTCCTCCTGCCCTaGCACAAGGAAGTCTCCCAGGCAGGCACACAGCTTAGTGCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: GSLGLFVLGSSLLLP*HKEVSQAGTQLSAY Trigger: ATAAGCACTAAGCTGTGTGCCTGCCTGGGAGACTTCCTTGTGTCAGGGCAGGAGGAGGCTGCTTCCTAGAACAAAAAGCCCAAGAGATCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000559002.5 |
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| CDS TCA 90 bp | AGACTTTCAGGCCAGTCTAACCCAGTGGGTTACAAAATGGGAAACTaGGGCCCAAGAGGGGCAGGATTCTACCTGGCCACACGCATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RLSGQSNPVGYKMGN*GPRGAGFYLATRIQ Trigger: CTGAATGCGTGTGGCCAGGTAGAATCCTGCCCCTCTTGGGCCTCAGTTTCCCATTTTGTAACCCACTGGGTTAGACTGGCCTGAAAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559080.1 |
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| CDS CCA 90 bp | AAGTCTCCCAGGCAGGCACACAGCTTAGTGCTTATGCATCTTCCCTaGCCATCAGGGGTTGCAGAAACAATCCTGCTGTCCCTAGAATGC | + |
|
Preference number: 5 (lower is better) Translates to: KSPRQAHSLVLMHLP*PSGVAETILLSLEC Trigger: GCATTCTAGGGACAGCAGGATTGTTTCTGCAACCCCTGATGGCCAGGGAAGATGCATAAGCACTAAGCTGTGTGCCTGCCTGGGAGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000326828.6 ENST00000559002.5 ENST00000559658.5 |
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| CDS-3UTR CAA 90 bp | AAGAGGACCCTCACCAGACACCAAATTTGCTGGTGCCTTGACCTTGGACCTCCCTCATTCCAGATTTGCTaGAGCCACAGGTTGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KRTLTRHQICWCLDLGPPSFQIC*SHRLVS Trigger: GGAGACCAACCTGTGGCTCAAGCAAATCTGGAATGA...GGGAGGTCCAAGGTCAAGGCACCAGCAAATTTGGTGTCTGGTGAGGGTCCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR CAA 90 bp | AAGAGGACCCTCACCAGACACCAAATTTGCTGGTGCCTTGACCTTGGACCTCCCACCTCCCCAGTGTACTaGAGTAAGGCTTTGGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KRTLTRHQICWCLDLGPPTSPVY*SKALVL Trigger: CAAGACCAAAGCCTTACTCAAGTACACTGGGGAGGT...GGGAGGTCCAAGGTCAAGGCACCAGCAAATTTGGTGTCTGGTGAGGGTCCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS GCA 90 bp | GGCACACAGCTTAGTGCTTATGCATCTTCCCTGGCCATCAGGGGTTaGAGAAACAATCCTGCTGTCCCTAGAATGCACACCAGGGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GTQLSAYASSLAIRG*RNNPAVPRMHTRVK Trigger: TTTCACCCTGGTGTGCATTCTAGGGACAGCAGGATTGTTTCTGCAACCCCTGATGGCCAGGGAAGATGCATAAGCACTAAGCTGTGTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000326828.6 ENST00000559002.5 ENST00000559658.5 |
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| CDS-3UTR CAA 90 bp | GTGGTCCAAATGTGTCCTCCCCCAATTCATATGTTGAAACCTATTCCCAGCGTGTCACCCATGAGGGCATaGTGTGTGTCGTCGGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VVQMCPPPIHMLKPIPSVSPMRA*CVSSGF Trigger: GAACCCCGACGACACACACAATGCCCTCATGGGTGA...CACGCTGGGAATAGGTTTCAACATATGAATTGGGGGAGGACACATTTGGACCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS CCA 90 bp | CACCTTCACCAGCTGAGACATGGACACCTCGAAATGGATGATGACTaGGTCAGACACGTTGGCTACAGGCCGGATGATCTCATTGTAATC | + |
|
Preference number: 5 (lower is better) Translates to: HLHQLRHGHLEMDDD*VRHVGYRPDDLIVI Trigger: GATTACAATGAGATCATCCGGCCTGTAGCCAACGTGTCTGACCCAGTCATCATCCATTTCGAGGTGTCCATGTCTCAGCTGGTGAAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000326828.6 ENST00000348639.7 ENST00000559080.1 ENST00000559658.5 ENST00000561128.1 |
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| CDS-3UTR CAA 90 bp | GGTACTGCTAAAGATCCTACAATGCACAGGATACCCCCATTCTGTACCAACACAACTGGGTCAGACACGTaGGCTACAGGCCGGATGATC | + |
|
Preference number: 5 (lower is better) Translates to: GTAKDPTMHRIPPFCTNTTGSDT*ATGRMI Trigger: GATCATCCGGCCTGTAGCCAACGTGTCTGACCCAGT...TGTGTTGGTACAGAATGGGGGTATCCTGTGCATTGTAGGATCTTTAGCAGTACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS GCA 90 bp | AACAGCATTGTTATACAGCACAATGTCTGGCTTCCAGATCTTCTGTaGAGGGACACGCATGAACTCTGCCCCACCATAGTCAGAGGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: NSIVIQHNVWLPDLL*RDTHELCPTIVRGV Trigger: AACCCCTCTGACTATGGTGGGGCAGAGTTCATGCGTGTCCCTGCACAGAAGATCTGGAAGCCAGACATTGTGCTGTATAACAATGCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000326828.6 ENST00000348639.7 ENST00000559658.5 |
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| CDS-3UTR CAA 90 bp | AGAGGACCCTCACCAGACACCAAATTTGCTGGTGCCTTGACCTTGGACCTCCCAAAATCCCCAACAGCATaGTTATACAGCACAATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RGPSPDTKFAGALTLDLPKSPTA*LYSTMS Trigger: AGACATTGTGCTGTATAACAATGCTGTTGGGGATTT...TGGGAGGTCCAAGGTCAAGGCACCAGCAAATTTGGTGTCTGGTGAGGGTCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR CAA 90 bp | ATAGCCCAGGTTCTTGATCGGATGTTTCTGTGGACTTTTCTTTTCGTTTCAATTCGGCAGGAGAATCGCTaGAACCCAGGTGGCGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: IAQVLDRMFLWTFLFVSIRQENR*NPGGGG Trigger: ACCTCCGCCACCTGGGTTCAAGCGATTCTCCTGCCG...AATTGAAACGAAAAGAAAAGTCCACAGAAACATCCGATCAAGAACCTGGGCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| CDS-3UTR CAA 90 bp | AGGGAACATTTAACAATGGAGACATTCTTGGTTATCATAACTGGTGAAGAAGCACCCTCCTTGCAGCCTTaGGACTCTGCGCGGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: REHLTMETFLVIITGEEAPSLQP*DSARLK Trigger: CTTCAGCCGCGCAGAGTCCAAAGGCTGCAAGGAGGG...TGCTTCTTCACCAGTTATGATAACCAAGAATGTCTCCATTGTTAAATGTTCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR CAA 90 bp | GGATCTCTTGGGCTTTTTGTTCCTGTAATCCCAGCTACCTGGGAGGCTGCGGCATTTTCAGCAATATACTaGACACTTTGGATGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GSLGLFVPVIPATWEAAAFSAIY*TLWMAS Trigger: AGAAGCCATCCAAAGTGTCAAGTATATTGCTGAAAA...TGCCGCAGCCTCCCAGGTAGCTGGGATTACAGGAACAAAAAGCCCAAGAGATCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| CDS-3UTR CAA 90 bp | GGATCTCTTGGGCTTTTTGTTCCTGTAATCCCAGCTACCTGGGAGGCTGCGGCATTCTTTTCGTTTCAATaGTTGGATCTCTTGGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GSLGLFVPVIPATWEAAAFFSFQ*LDLLGF Trigger: AAAGCCCAAGAGATCCAACAATTGAAACGAAAAGAA...TGCCGCAGCCTCCCAGGTAGCTGGGATTACAGGAACAAAAAGCCCAAGAGATCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| CDS-3UTR CAA 90 bp | ATAGCCCAGGTTCTTGATCGGATGTTTCTGTGGACTTTTCTTTTCGTTTCAATTACTGGGTCAGACACGTaGGCTACAGGCCGGATGATC | + |
|
Preference number: 5 (lower is better) Translates to: IAQVLDRMFLWTFLFVSITGSDT*ATGRMI Trigger: GATCATCCGGCCTGTAGCCAACGTGTCTGACCCAGT...AATTGAAACGAAAAGAAAAGTCCACAGAAACATCCGATCAAGAACCTGGGCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559658.5 |
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| CDS-3UTR CAA 90 bp | GGTACTGCTAAAGATCCTACAATGCACAGGATACCCCCATTCTGTACCAACACAGTAGTCATTCCAGATTaGCTTGAGCCACAGGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GTAKDPTMHRIPPFCTNTVVIPD*LEPQVG Trigger: ACCAACCTGTGGCTCAAGCAAATCTGGAATGACTAC...TGTGTTGGTACAGAATGGGGGTATCCTGTGCATTGTAGGATCTTTAGCAGTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000326828.6 |
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| CDS-3UTR CAA 90 bp | TGTTGGATCTCTTGGGCTTTTTGTTCCTGTAATCCCAGCTACCTGGGAGGCTGCCTTCATGGTACAGTTTaGGTAATCAAACGGGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: CWISWAFCSCNPSYLGGCLHGTV*VIKREV Trigger: TACTTCCCGTTTGATTACCAAAACTGTACCATGAAG...GCAGCCTCCCAGGTAGCTGGGATTACAGGAACAAAAAGCCCAAGAGATCCAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000559658.5 |
||
| CDS TCA 90 bp | TATCTGCCAGTCAGTGGACCCCAATCTGGGTTCCACAGAAGTAAATaGAGCCTGGTCTTTAGGCCTTTCTTGGTTCACCTAAAGCAAATA | + |
|
Preference number: 5 (lower is better) Translates to: YLPVSGPQSGFHRSK*SLVFRPFLVHLKQI Trigger: TATTTGCTTTAGGTGAACCAAGAAAGGCCTAAAGACCAGGCTTCATTTACTTCTGTGGAACCCAGATTGGGGTCCACTGACTGGCAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561128.1 |
||
| CDS-3UTR CAA 90 bp | ACCAGGGGCAATTTTGCTCCTAAGGGAACATTTAACAATGGAGACATTCTTGGTAGTAAGGCTTTGGTCTaGTCGTCCACCTGGAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: TRGNFAPKGTFNNGDILGSKALV*SSTWKS Trigger: GGATTTCCAGGTGGACGACAAGACCAAAGCCTTACT...ACCAAGAATGTCTCCATTGTTAAATGTTCCCTTAGGAGCAAAATTGCCCCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000326828.6 |
||
| CDS-3UTR CAA 90 bp | GTGATTGTCTTAGATAGAAGGTGGGGCCTTGGAAAGGTGATTAGGCCATGGGGGTTTTCAGCAATATACTaGACACTTTGGATGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VIVLDRRWGLGKVIRPWGFSAIY*TLWMAS Trigger: AGAAGCCATCCAAAGTGTCAAGTATATTGCTGAAAA...CCCCCATGGCCTAATCACCTTTCCAAGGCCCCACCTTCTATCTAAGACAATCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000326828.6 |
||
| CDS-3UTR CAA 90 bp | ATAGCCCAGGTTCTTGATCGGATGTTTCTGTGGACTTTTCTTTTCGTTTCAATTCCTGGCCATCAGGGGTaGCAGAAACAATCCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: IAQVLDRMFLWTFLFVSIPGHQG*QKQSCC Trigger: ACAGCAGGATTGTTTCTGCAACCCCTGATGGCCAGG...AATTGAAACGAAAAGAAAAGTCCACAGAAACATCCGATCAAGAACCTGGGCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000559658.5 |
||
| CDS-3UTR CAA 90 bp | TCTTTTCGTTTCAATTGTTGGATCTCTTGGGCTTTTTGTTCCTGTAATCCCAGCAGTAAGGCTTTGGTCTaGTCGTCCACCTGGAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: SFRFNCWISWAFCSCNPSSKALV*SSTWKS Trigger: GGATTTCCAGGTGGACGACAAGACCAAAGCCTTACT...GCTGGGATTACAGGAACAAAAAGCCCAAGAGATCCAACAATTGAAACGAAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000559658.5 |
||
| CDS-3UTR CAA 90 bp | CTAAAGCAATGTTTCTCAACCAGGGGCAATTTTGCTCCTAAGGGAACATTTAACTACTTGAGTAAGGCTTaGGTCTTGTCGTCCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LKQCFSTRGNFAPKGTFNYLSKA*VLSSTW Trigger: CCAGGTGGACGACAAGACCAAAGCCTTACTCAAGTA...GTTAAATGTTCCCTTAGGAGCAAAATTGCCCCTGGTTGAGAAACATTGCTTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000326828.6 |
||
| CDS-3UTR CAA 90 bp | TCTTTTCGTTTCAATTGTTGGATCTCTTGGGCTTTTTGTTCCTGTAATCCCAGCTACTTGAGTAAGGCTTaGGTCTTGTCGTCCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SFRFNCWISWAFCSCNPSYLSKA*VLSSTW Trigger: CCAGGTGGACGACAAGACCAAAGCCTTACTCAAGTA...GCTGGGATTACAGGAACAAAAAGCCCAAGAGATCCAACAATTGAAACGAAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000559658.5 |
||
| CDS-3UTR CAA 90 bp | TTCATAGCCCAGGTTCTTGATCGGATGTTTCTGTGGACTTTTCTTTTCGTTTCAACCTCCCCAGTGTACTaGAGTAAGGCTTTGGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FIAQVLDRMFLWTFLFVSTSPVY*SKALVL Trigger: CAAGACCAAAGCCTTACTCAAGTACACTGGGGAGGT...TGAAACGAAAAGAAAAGTCCACAGAAACATCCGATCAAGAACCTGGGCTATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000559658.5 |
||
| CDS-3UTR CAA 90 bp | ACCAGGGGCAATTTTGCTCCTAAGGGAACATTTAACAATGGAGACATTCTTGGTATCTCCTCGCAGCAGTaGTACTTGATGTCGTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TRGNFAPKGTFNNGDILGISSQQ*YLMSCL Trigger: CAAACACGACATCAAGTACAACTGCTGCGAGGAGAT...ACCAAGAATGTCTCCATTGTTAAATGTTCCCTTAGGAGCAAAATTGCCCCTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000326828.6 |
||
| CDS CCA 90 bp | GCAAATCCTGACAAATCACTTGTAAGCTGTGTGAGCTTAGGCAAGTaGCTTAACCTCTCTGAACCTGTGTCTTTACCAGTCAAAATAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ANPDKSLVSCVSLGK*LNLSEPVSLPVKIR Trigger: CCTTATTTTGACTGGTAAAGACACAGGTTCAGAGAGGTTAAGCCACTTGCCTAAGCTCACACAGCTTACAAGTGATTTGTCAGGATTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559080.1 |
||
| CDS TCA 90 bp | TTCAGCAATATACTTGACACTTTGGATGGCTTCTTTGATTTCTGGTaGCAAAGCAGAGAGGGACAGCACAGCATCAACAGATTCAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: FSNILDTLDGFFDFW*QSREGQHSINRFRT Trigger: AGTTCTGAATCTGTTGATGCTGTGCTGTCCCTCTCTGCTTTGTCACCAGAAATCAAAGAAGCCATCCAAAGTGTCAAGTATATTGCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000326828.6 ENST00000348639.7 ENST00000559658.5 |
||
| CDS-3UTR CAA 90 bp | TTGATCGGATGTTTCTGTGGACTTTTCTTTTCGTTTCAATTGTTGGATCTCTTGTCATTCCAGATTTGCTaGAGCCACAGGTTGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LIGCFCGLFFSFQLLDLLSFQIC*SHRLVS Trigger: GGAGACCAACCTGTGGCTCAAGCAAATCTGGAATGA...CAAGAGATCCAACAATTGAAACGAAAAGAAAAGTCCACAGAAACATCCGATCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559658.5 |
||
| CDS-3UTR CAA 90 bp | ACCAGGGGCAATTTTGCTCCTAAGGGAACATTTAACAATGGAGACATTCTTGGTAGGTTAGCACTGAAATaGGAGATTTTTATCCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TRGNFAPKGTFNNGDILGRLALK*EIFILR Trigger: CCGCAGGATAAAAATCTCCAATTTCAGTGCTAACCT...ACCAAGAATGTCTCCATTGTTAAATGTTCCCTTAGGAGCAAAATTGCCCCTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000326828.6 |
||
| CDS-3UTR CAA 90 bp | ACCAGGGGCAATTTTGCTCCTAAGGGAACATTTAACAATGGAGACATTCTTGGTCTTTGGATGGCTTCTTaGATTTCTGGTGACAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TRGNFAPKGTFNNGDILGLWMAS*ISGDKA Trigger: TGCTTTGTCACCAGAAATCAAAGAAGCCATCCAAAG...ACCAAGAATGTCTCCATTGTTAAATGTTCCCTTAGGAGCAAAATTGCCCCTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000326828.6 |
||
| CDS-3UTR CAA 90 bp | TTGATCGGATGTTTCTGTGGACTTTTCTTTTCGTTTCAATTGTTGGATCTCTTGATCTCCTCGCAGCAGTaGTACTTGATGTCGTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LIGCFCGLFFSFQLLDLLISSQQ*YLMSCL Trigger: CAAACACGACATCAAGTACAACTGCTGCGAGGAGAT...CAAGAGATCCAACAATTGAAACGAAAAGAAAAGTCCACAGAAACATCCGATCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559658.5 |
||
| CDS-3UTR CAA 90 bp | TCTTTTCGTTTCAATTGTTGGATCTCTTGGGCTTTTTGTTCCTGTAATCCCAGCCTTTGGATGGCTTCTTaGATTTCTGGTGACAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SFRFNCWISWAFCSCNPSLWMAS*ISGDKA Trigger: TGCTTTGTCACCAGAAATCAAAGAAGCCATCCAAAG...GCTGGGATTACAGGAACAAAAAGCCCAAGAGATCCAACAATTGAAACGAAAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000559658.5 |
||
| CDS-3UTR CAA 90 bp | ACCAGGGGCAATTTTGCTCCTAAGGGAACATTTAACAATGGAGACATTCTTGGTAACAAAGCTGGTAGCTaGATAACAGAAAGTACGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TRGNFAPKGTFNNGDILGNKAGS*ITESTF Trigger: GAACGTACTTTCTGTTATCAAGCTACCAGCTTTGTT...ACCAAGAATGTCTCCATTGTTAAATGTTCCCTTAGGAGCAAAATTGCCCCTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000326828.6 |
||
| CDS-3UTR CAA 90 bp | ACCTCCAAAACTGAGAAGTTTCTGTTGTTTATAATCCACCCAGTTTATGGTGTACCCCCAATTCATATGTaGAAACCTATTCCCAGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: TSKTEKFLLFIIHPVYGVPPIHM*KPIPSV Trigger: CACGCTGGGAATAGGTTTCAACATATGAATTGGGGG...TACACCATAAACTGGGTGGATTATAAACAACAGAAACTTCTCAGTTTTGGAGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000326828.6 |
||
| CDS-3UTR CAA 90 bp | TTCATAGCCCAGGTTCTTGATCGGATGTTTCTGTGGACTTTTCTTTTCGTTTCAAAATCCCCAACAGCATaGTTATACAGCACAATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FIAQVLDRMFLWTFLFVSKSPTA*LYSTMS Trigger: AGACATTGTGCTGTATAACAATGCTGTTGGGGATTT...TGAAACGAAAAGAAAAGTCCACAGAAACATCCGATCAAGAACCTGGGCTATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000559658.5 |
||
| CDS-3UTR CAA 90 bp | CTAAAGCAATGTTTCTCAACCAGGGGCAATTTTGCTCCTAAGGGAACATTTAACCTTCATGGTACAGTTTaGGTAATCAAACGGGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: LKQCFSTRGNFAPKGTFNLHGTV*VIKREV Trigger: TACTTCCCGTTTGATTACCAAAACTGTACCATGAAG...GTTAAATGTTCCCTTAGGAGCAAAATTGCCCCTGGTTGAGAAACATTGCTTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000326828.6 |
||
| CDS-3UTR CAA 90 bp | ACCTCCAAAACTGAGAAGTTTCTGTTGTTTATAATCCACCCAGTTTATGGTGTACAACCAGGGGCAATTTaGCTCCTAAGGGAACATTTA | + |
|
Preference number: 5 (lower is better) Translates to: TSKTEKFLLFIIHPVYGVQPGAI*LLREHL Trigger: TAAATGTTCCCTTAGGAGCAAAATTGCCCCTGGTTG...TACACCATAAACTGGGTGGATTATAAACAACAGAAACTTCTCAGTTTTGGAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000326828.6 |
||
| CDS-3UTR CAA 90 bp | TTGATCGGATGTTTCTGTGGACTTTTCTTTTCGTTTCAATTGTTGGATCTCTTGAGGTTAGCACTGAAATaGGAGATTTTTATCCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LIGCFCGLFFSFQLLDLLRLALK*EIFILR Trigger: CCGCAGGATAAAAATCTCCAATTTCAGTGCTAACCT...CAAGAGATCCAACAATTGAAACGAAAAGAAAAGTCCACAGAAACATCCGATCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000559658.5 |
||
| CDS-3UTR CAA 90 bp | TTGATCGGATGTTTCTGTGGACTTTTCTTTTCGTTTCAATTGTTGGATCTCTTGTTTTCGTTTCAATTGTaGGATCTCTTGGGCTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LIGCFCGLFFSFQLLDLLFSFQL*DLLGFL Trigger: CAAAAAGCCCAAGAGATCCAACAATTGAAACGAAAA...CAAGAGATCCAACAATTGAAACGAAAAGAAAAGTCCACAGAAACATCCGATCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000559658.5 |
||
| CDS CCA 72 bp | CAGGGGCAGCGAGAGCGGGCCAGAGCCCATGGCTGGTaGCCGGGCTGGCCGCGGACCCGGACGGTCGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: QGQRERARAHGW*PGWPRTRTVGS Trigger: GCTCCCGACCGTCCGGGTCCGCGGCCAGCCCGGCCACCAGCCATGGGCTCTGGCCCGCTCTCGCTGCCCCTG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000326828.6 ENST00000348639.7 ENST00000559658.5 |
||
| CDS CCA 72 bp | ACAGCGCCAGGGGCAGCGAGAGCGGGCCAGAGCCCATaGCTGGTGGCCGGGCTGGCCGCGGACCCGGACGGT | + |
|
Preference number: 6 (lower is better) Translates to: TAPGAARAGQSP*LVAGLAADPDG Trigger: ACCGTCCGGGTCCGCGGCCAGCCCGGCCACCAGCCATGGGCTCTGGCCCGCTCTCGCTGCCCCTGGCGCTGT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000326828.6 ENST00000348639.7 ENST00000559658.5 |
||
| CDS GCA 72 bp | CCAGCGCCGGGCGAGCTCCTTCTCCGCCGGGCTGGGTaGTCCGGCCGGCGGCGTCCGACCAGATCTGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PAPGELLLRRAG*SGRRRPTRSEQ Trigger: CTGCTCAGATCTGGTCGGACGCCGCCGGCCGGAGCACCCAGCCCGGCGGAGAAGGAGCTCGCCCGGCGCTGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000348639.7 |
||
| CDS CCA 72 bp | GGAGACGCGCGGGGCTCCTCTCCGCTTCGCCGCCGCTaGGTTTCCAGCGCCCTCGGACCCGCGGGAGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: GDARGSSPLRRR*VSSALGPAGGQ Trigger: CTGTCCTCCCGCGGGTCCGAGGGCGCTGGAAACCCAGCGGCGGCGAAGCGGAGAGGAGCCCCGCGCGTCTCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326828.6 ENST00000348639.7 |
||
| CDS GCA 72 bp | CGCCGGCCTGGGCCCTCCAGGAATTCCCTGCAGCCTTaGCCGGTCCCCGACTCTCGCTACCCACCAGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RRPGPSRNSLQP*PVPDSRYPPAL Trigger: GAGGGCTGGTGGGTAGCGAGAGTCGGGGACCGGGCAAGGCTGCAGGGAATTCCTGGAGGGCCCAGGCCGGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559941.1 |
||
| CDS CAA 72 bp | CCGCCGGCCTGGGCCCTCCAGGAATTCCCTGCAGCCTaGCCCGGTCCCCGACTCTCGCTACCCACCAGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PPAWALQEFPAA*PGPRLSLPTSP Trigger: AGGGCTGGTGGGTAGCGAGAGTCGGGGACCGGGCAAGGCTGCAGGGAATTCCTGGAGGGCCCAGGCCGGCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559941.1 |
||
| CDS CAA 90 bp | CACGACAGACCGCCGGCCTGGGCCCTCCAGGAATTCCCTGCAGCCTaGCCCGGTCCCCGACTCTCGCTACCCACCAGCCCTCCCAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: HDRPPAWALQEFPAA*PGPRLSLPTSPPRH Trigger: GTGCCTGGGAGGGCTGGTGGGTAGCGAGAGTCGGGGACCGGGCAAGGCTGCAGGGAATTCCTGGAGGGCCCAGGCCGGCGGTCTGTCGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559941.1 |
||
| CDS GCA 72 bp | CGACAGACCGCCGGCCTGGGCCCTCCAGGAATTCCCTaGAGCCTTGCCCGGTCCCCGACTCTCGCTACCCAC | + |
|
Preference number: 6 (lower is better) Translates to: RQTAGLGPPGIP*SLARSPTLATH Trigger: GTGGGTAGCGAGAGTCGGGGACCGGGCAAGGCTGCAGGGAATTCCTGGAGGGCCCAGGCCGGCGGTCTGTCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559941.1 |
||
| CDS CCA 72 bp | GCTCTGAGCTCACAGCCGCACGACAGACCGCCGGCCTaGGCCCTCCAGGAATTCCCTGCAGCCTTGCCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: ALSSQPHDRPPA*ALQEFPAALPG Trigger: ACCGGGCAAGGCTGCAGGGAATTCCTGGAGGGCCCAGGCCGGCGGTCTGTCGTGCGGCTGTGAGCTCAGAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559941.1 |
||
| CDS GCA 72 bp | GCTCCGGCCGGCGGCGTCCGACCAGATCTGAGCAGGTaGTGTCACCACCACCAGGAAGGAGAGGGACTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: APAGGVRPDLSR*CHHHQEGEGLS Trigger: ACTGAGTCCCTCTCCTTCCTGGTGGTGGTGACAGCACCTGCTCAGATCTGGTCGGACGCCGCCGGCCGGAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000348639.7 |
||
| CDS CCA 72 bp | GCCGCTCAAATAGACGGTGCTCAGCCTCTGAGGCCCTaGCCACTGGCAGCAGAGACAGCAGCAGCAGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: AAQIDGAQPLRP*PLAAETAAAAA Trigger: TGCTGCTGCTGCTGCTGTCTCTGCTGCCAGTGGCCAGGGCCTCAGAGGCTGAGCACCGTCTATTTGAGCGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000326828.6 ENST00000348639.7 ENST00000559658.5 ENST00000561128.1 |
||
| CDS CCA 72 bp | GCCCTGGCCACTGTGGGAAGCAGCCCTGTCAGTCCCTaGGGAAATCGTTACTTAACCTCCCCCACCCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ALATVGSSPVSP*GNRYLTSPTQP Trigger: GGGCTGGGTGGGGGAGGTTAAGTAACGATTTCCCCAGGGACTGACAGGGCTGCTTCCCACAGTGGCCAGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000559080.1 |
||
| CDS CCA 72 bp | GGGCCTCGGCTTCTGAGCGTTGCCCTCGTTGCTTGTTaGCCTGGTCATGAACATGACCCTGGGGAGCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GPRLLSVALVAC*PGHEHDPGEQV Trigger: AACCTGCTCCCCAGGGTCATGTTCATGACCAGGCCAACAAGCAACGAGGGCAACGCTCAGAAGCCGAGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000326828.6 ENST00000348639.7 ENST00000559658.5 |
||
| CDS TCA 72 bp | GCCTTTGGACTCTGCGCGGCTGAAGCAATTCAGATTTaGGAGCTCGGCACCGTAGAGGGGCCTCGGCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: AFGLCAAEAIQI*ELGTVEGPRLL Trigger: CAGAAGCCGAGGCCCCTCTACGGTGCCGAGCTCTCAAATCTGAATTGCTTCAGCCGCGCAGAGTCCAAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000326828.6 ENST00000348639.7 ENST00000559658.5 |
||
| CDS TCA 72 bp | GGTAGCCCTCCTTGCAGCCTTTGGACTCTGCGCGGCTaGAGCAATTCAGATTTGAGAGCTCGGCACCGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: GSPPCSLWTLRG*SNSDLRARHRR Trigger: TCTACGGTGCCGAGCTCTCAAATCTGAATTGCTTCAGCCGCGCAGAGTCCAAAGGCTGCAAGGAGGGCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000326828.6 ENST00000348639.7 ENST00000559658.5 |
||
| CDS CCA 72 bp | CAGCTGAGACATGGACACCTCGAAATGGATGATGACTaGGTCAGACACGTTGGCTACAGGCCGGATGATCTC | + |
|
Preference number: 6 (lower is better) Translates to: QLRHGHLEMDDD*VRHVGYRPDDL Trigger: GAGATCATCCGGCCTGTAGCCAACGTGTCTGACCCAGTCATCATCCATTTCGAGGTGTCCATGTCTCAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000326828.6 ENST00000348639.7 ENST00000559080.1 ENST00000559658.5 ENST00000561128.1 |
||
| CDS CCA 72 bp | AGGCAGGCACACAGCTTAGTGCTTATGCATCTTCCCTaGCCATCAGGGGTTGCAGAAACAATCCTGCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RQAHSLVLMHLP*PSGVAETILLS Trigger: GGACAGCAGGATTGTTTCTGCAACCCCTGATGGCCAGGGAAGATGCATAAGCACTAAGCTGTGTGCCTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000326828.6 ENST00000559002.5 ENST00000559658.5 |
||
| CDS TCA 72 bp | TGGCCGGAGGTATCCAAGTCACCTCCCCAGTGTACTTaGGTAAGGCTTTGGTCTTGTCGTCCACCTGGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: WPEVSKSPPQCT*VRLWSCRPPGN Trigger: ATTTCCAGGTGGACGACAAGACCAAAGCCTTACTCAAGTACACTGGGGAGGTGACTTGGATACCTCCGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000326828.6 ENST00000348639.7 ENST00000558903.1 ENST00000559658.5 |
||
| CDS GCA 72 bp | CTTCCAGATCTTCTGTGCAGGGACACGCATGAACTCTaGCCCACCATAGTCAGAGGGGTTCCATTTCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LPDLLCRDTHEL*PTIVRGVPFQL Trigger: AAGCTGAAATGGAACCCCTCTGACTATGGTGGGGCAGAGTTCATGCGTGTCCCTGCACAGAAGATCTGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000326828.6 ENST00000348639.7 ENST00000559658.5 |
||
| CDS CAA 72 bp | ATGGCCGGAGGTATCCAAGTCACCTCCCCAGTGTACTaGAGTAAGGCTTTGGTCTTGTCGTCCACCTGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: MAGGIQVTSPVY*SKALVLSSTWK Trigger: TTTCCAGGTGGACGACAAGACCAAAGCCTTACTCAAGTACACTGGGGAGGTGACTTGGATACCTCCGGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000326828.6 ENST00000348639.7 ENST00000558903.1 ENST00000559658.5 |
||
| CDS CAA 90 bp | GCCGGAGGTATCCAAGTCACCTCCCCAGTGTACTTGAGTAAGGCTTaGGTCTTGTCGTCCACCTGGAAATCCCCAACAGCATTGTTATAC | + |
|
Preference number: 6 (lower is better) Translates to: AGGIQVTSPVYLSKA*VLSSTWKSPTALLY Trigger: GTATAACAATGCTGTTGGGGATTTCCAGGTGGACGACAAGACCAAAGCCTTACTCAAGTACACTGGGGAGGTGACTTGGATACCTCCGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000326828.6 ENST00000348639.7 ENST00000559658.5 |
||
| CDS GCA 72 bp | CTTAGTGCTTATGCATCTTCCCTGGCCATCAGGGGTTaGAGAAACAATCCTGCTGTCCCTAGAATGCACACC | + |
|
Preference number: 6 (lower is better) Translates to: LSAYASSLAIRG*RNNPAVPRMHT Trigger: GGTGTGCATTCTAGGGACAGCAGGATTGTTTCTGCAACCCCTGATGGCCAGGGAAGATGCATAAGCACTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000326828.6 ENST00000559002.5 ENST00000559658.5 |
||
| CDS CAA 72 bp | ATCCAAGTCACCTCCCCAGTGTACTTGAGTAAGGCTTaGGTCTTGTCGTCCACCTGGAAATCCCCAACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: IQVTSPVYLSKA*VLSSTWKSPTA Trigger: TGCTGTTGGGGATTTCCAGGTGGACGACAAGACCAAAGCCTTACTCAAGTACACTGGGGAGGTGACTTGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000326828.6 ENST00000348639.7 ENST00000558903.1 ENST00000559658.5 |
||
| CDS CAA 72 bp | GTCACCTCCCCAGTGTACTTGAGTAAGGCTTTGGTCTaGTCGTCCACCTGGAAATCCCCAACAGCATTGTTA | + |
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Preference number: 6 (lower is better) Translates to: VTSPVYLSKALV*SSTWKSPTALL Trigger: TAACAATGCTGTTGGGGATTTCCAGGTGGACGACAAGACCAAAGCCTTACTCAAGTACACTGGGGAGGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000326828.6 ENST00000348639.7 ENST00000559658.5 |
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| CDS CAA 90 bp | GGTATCCAAGTCACCTCCCCAGTGTACTTGAGTAAGGCTTTGGTCTaGTCGTCCACCTGGAAATCCCCAACAGCATTGTTATACAGCACA | + |
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Preference number: 6 (lower is better) Translates to: GIQVTSPVYLSKALV*SSTWKSPTALLYST Trigger: TGTGCTGTATAACAATGCTGTTGGGGATTTCCAGGTGGACGACAAGACCAAAGCCTTACTCAAGTACACTGGGGAGGTGACTTGGATACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000326828.6 ENST00000348639.7 ENST00000559658.5 |
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| CDS TCA 72 bp | TCCATGATCTGGTTTACTTCATCCACCTTCACCAGCTaGGACATGGACACCTCGAAATGGATGATGACTGGG | + |
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Preference number: 6 (lower is better) Translates to: SMIWFTSSTFTS*DMDTSKWMMTG Trigger: CCCAGTCATCATCCATTTCGAGGTGTCCATGTCTCAGCTGGTGAAGGTGGATGAAGTAAACCAGATCATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000326828.6 ENST00000348639.7 ENST00000559080.1 ENST00000559658.5 ENST00000561128.1 |
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| CDS TCA 72 bp | GTCAGTGGACCCCAATCTGGGTTCCACAGAAGTAAATaGAGCCTGGTCTTTAGGCCTTTCTTGGTTCACCTA | + |
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Preference number: 6 (lower is better) Translates to: VSGPQSGFHRSK*SLVFRPFLVHL Trigger: TAGGTGAACCAAGAAAGGCCTAAAGACCAGGCTTCATTTACTTCTGTGGAACCCAGATTGGGGTCCACTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561128.1 |
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| CDS CAA 72 bp | CAGCTTGGGGAAGCGGGAGGAGAATCCTCTAGGAAGTaGAATCCAACTTCCTCAGGTCTTGAAATAGGATTT | + |
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Preference number: 6 (lower is better) Translates to: QLGEAGGESSRK*NPTSSGLEIGF Trigger: AAATCCTATTTCAAGACCTGAGGAAGTTGGATTCAACTTCCTAGAGGATTCTCCTCCCGCTTCCCCAAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559941.1 |
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| CDS TCA 72 bp | GAAACAATCCTGCTGTCCCTAGAATGCACACCAGGGTaGAAACCCACAGAAAAATACGATCAATCACCATGG | + |
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Preference number: 6 (lower is better) Translates to: ETILLSLECTPG*KPTEKYDQSPW Trigger: CCATGGTGATTGATCGTATTTTTCTGTGGGTTTTCACCCTGGTGTGCATTCTAGGGACAGCAGGATTGTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000326828.6 ENST00000559002.5 ENST00000559658.5 |
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| CDS CCA 72 bp | GTGTACTTGAGTAAGGCTTTGGTCTTGTCGTCCACCTaGAAATCCCCAACAGCATTGTTATACAGCACAATG | + |
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Preference number: 6 (lower is better) Translates to: VYLSKALVLSST*KSPTALLYSTM Trigger: CATTGTGCTGTATAACAATGCTGTTGGGGATTTCCAGGTGGACGACAAGACCAAAGCCTTACTCAAGTACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000326828.6 ENST00000348639.7 ENST00000559658.5 |
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| CDS CCA 72 bp | GACAAATCACTTGTAAGCTGTGTGAGCTTAGGCAAGTaGCTTAACCTCTCTGAACCTGTGTCTTTACCAGTC | + |
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Preference number: 6 (lower is better) Translates to: DKSLVSCVSLGK*LNLSEPVSLPV Trigger: GACTGGTAAAGACACAGGTTCAGAGAGGTTAAGCCACTTGCCTAAGCTCACACAGCTTACAAGTGATTTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559080.1 |
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