Pregenerated sensors for CHRFAM7A (Homo sapiens)
Ensembl gene IDs: ENSG00000166664Ensembl transcript IDs: ENST00000299847.7
Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ATCTCATTAAAGAATAAGAATGAGACCATCCTGGCTAACATGATGAAACCCTATGGCAGGAGAATGGCATaGACCCAGGAGGTGGAGCTT | + |
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Preference number: 2 (lower is better) Translates to: ISLKNKNETILANMMKPYGRRMA*TQEVEL Trigger: AAGCTCCACCTCCTGGGTTCATGCCATTCTCCTGCC...ATAGGGTTTCATCATGTTAGCCAGGATGGTCTCATTCTTATTCTTTAATGAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299847.7 |
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| 3UTR-3UTR TCA 90 bp | ATCTCATTAAAGAATAAGAATGAGACCATCCTGGCTAACATGATGAAACCCTATGAGCTTGCAGTGAGCTaGGATCATGCCACTGCACTC | + |
|
Preference number: 2 (lower is better) Translates to: ISLKNKNETILANMMKPYELAVS*DHATAL Trigger: GAGTGCAGTGGCATGATCTCAGCTCACTGCAAGCTC...ATAGGGTTTCATCATGTTAGCCAGGATGGTCTCATTCTTATTCTTTAATGAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299847.7 |
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| 3UTR-3UTR TCA 90 bp | ATCTCATTAAAGAATAAGAATGAGACCATCCTGGCTAACATGATGAAACCCTATAGGTGGAGCTTGCAGTaGGCTGAGATCATGCCACTG | + |
|
Preference number: 2 (lower is better) Translates to: ISLKNKNETILANMMKPYRWSLQ*AEIMPL Trigger: CAGTGGCATGATCTCAGCTCACTGCAAGCTCCACCT...ATAGGGTTTCATCATGTTAGCCAGGATGGTCTCATTCTTATTCTTTAATGAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299847.7 |
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| CDS-3UTR TCA 90 bp | ATCTCATTAAAGAATAAGAATGAGACCATCCTGGCTAACATGATGAAACCCTATACCAGTTCAGAAGGATaGCTCTGGTCCACTTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ISLKNKNETILANMMKPYTSSEG*LWSTWA Trigger: TGCCCAAGTGGACCAGAGTCATCCTTCTGAACTGGT...ATAGGGTTTCATCATGTTAGCCAGGATGGTCTCATTCTTATTCTTTAATGAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299847.7 |
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| CDS-3UTR CCA 90 bp | ATCTCATTAAAGAATAAGAATGAGACCATCCTGGCTAACATGATGAAACCCTATACTCTTGAATATGCCTaGAGGCAGGTACTGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: ISLKNKNETILANMMKPYTLEYA*RQVLAM Trigger: CATTGCCAGTACCTGCCTCCAGGCATATTCAAGAGT...ATAGGGTTTCATCATGTTAGCCAGGATGGTCTCATTCTTATTCTTTAATGAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299847.7 |
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| CDS-3UTR CAA 90 bp | ATCTCATTAAAGAATAAGAATGAGACCATCCTGGCTAACATGATGAAACCCTATTGGTTGTTTCATTATTaGTCAGAGTGCTTTCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: ISLKNKNETILANMMKPYWLFHY*SECFLH Trigger: GTGCAGAAAGCACTCTGACAAATAATGAAACAACCA...ATAGGGTTTCATCATGTTAGCCAGGATGGTCTCATTCTTATTCTTTAATGAGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299847.7 |
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