RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHRD (Homo sapiens)

Ensembl gene IDs: ENSG00000090539

Ensembl transcript IDs: ENST00000204604.5, ENST00000348986.3, ENST00000356534.7, ENST00000420973.5, ENST00000448472.5, ENST00000450923.5, ENST00000459711.5, ENST00000460627.5, ENST00000461120.1, ENST00000461684.5, ENST00000464833.1, ENST00000470150.5, ENST00000482014.1, ENST00000482805.5, ENST00000485883.5

Found 875 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCGCTCGGCTGCCGCTCCGAACTGCTGCGCTCCTGGGGGCAGGTCTaGCAGCAGTGTCCCGGCAGCTGGCGCGGCTGCCCACAGGCCGGG +
Preference number: 1 (lower is better)
Translates to: PLGCRSELLRSWGQV*QQCPGSWRGCPQAG
Trigger: CCCGGCCTGTGGGCAGCCGCGCCAGCTGCCGGGACACTGCTGCCAGACCTGCCCCCAGGAGCGCAGCAGTTCGGAGCGGCAGCCGAGCGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR GCA 90 bp CGGAGGCTAGAGCGCAGCAGCGAGACTCGGGCTCGTGCCACCGCCTaGGACCTCGGCCCTGTCAGCAGCGCCACGAAGTCCGTGTGGCCG +
Preference number: 1 (lower is better)
Translates to: RRLERSSETRARATA*DLGPVSSATKSVWP
Trigger: CGGCCACACGGACTTCGTGGCGCTGCTGACAGGGCCGAGGTCGCAGGCGGTGGCACGAGCCCGAGTCTCGCTGCTGCGCTCTAGCCTCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR CCA 90 bp CACGAAGTCCGTGTGGCCGTCACCACGGGCCCGCTCCTCAGCGCCTaGCTCCCCGCGGTCGCTATAACTGCGATGCTCCGGGTCCCGCGG +
Preference number: 1 (lower is better)
Translates to: HEVRVAVTTGPLLSA*LPAVAITAMLRVPR
Trigger: CCGCGGGACCCGGAGCATCGCAGTTATAGCGACCGCGGGGAGCCAGGCGCTGAGGAGCGGGCCCGTGGTGACGGCCACACGGACTTCGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR GCA 90 bp CCCGCGGATACTCGAAGGACAGGCCGCTCGGCTGCCGCTCCGAACTaGTGCGCTCCTGGGGGCAGGTCTGGCAGCAGTGTCCCGGCAGCT +
Preference number: 1 (lower is better)
Translates to: PADTRRTGRSAAAPN*CAPGGRSGSSVPAA
Trigger: AGCTGCCGGGACACTGCTGCCAGACCTGCCCCCAGGAGCGCAGCAGTTCGGAGCGGCAGCCGAGCGGCCTGTCCTTCGAGTATCCGCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR GCA 90 bp CGATGCTCCGGGTCCCGCGGATACTCGAAGGACAGGCCGCTCGGCTaGCGCTCCGAACTGCTGCGCTCCTGGGGGCAGGTCTGGCAGCAG +
Preference number: 1 (lower is better)
Translates to: RCSGSRGYSKDRPLG*RSELLRSWGQVWQQ
Trigger: CTGCTGCCAGACCTGCCCCCAGGAGCGCAGCAGTTCGGAGCGGCAGCCGAGCGGCCTGTCCTTCGAGTATCCGCGGGACCCGGAGCATCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR GCA 90 bp CACGGGCCCGCTCCTCAGCGCCTGGCTCCCCGCGGTCGCTATAACTaGGATGCTCCGGGTCCCGCGGATACTCGAAGGACAGGCCGCTCG +
Preference number: 1 (lower is better)
Translates to: HGPAPQRLAPRGRYN*DAPGPADTRRTGRS
Trigger: CGAGCGGCCTGTCCTTCGAGTATCCGCGGGACCCGGAGCATCGCAGTTATAGCGACCGCGGGGAGCCAGGCGCTGAGGAGCGGGCCCGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR CCA 90 bp AGAAGCATGTGTTGGGGTCTCGGGGCCGCCCAGGACCACCAGGTTTaGCGGGCGCTAGGGCCGGGAGACCAGGCACCACAGGCGGCGCAG +
Preference number: 1 (lower is better)
Translates to: RSMCWGLGAAQDHQV*RALGPGDQAPQAAQ
Trigger: CTGCGCCGCCTGTGGTGCCTGGTCTCCCGGCCCTAGCGCCCGCCAAACCTGGTGGTCCTGGGCGGCCCCGAGACCCCAACACATGCTTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR CCA 90 bp CTCAGGGCAAACAGGGCAGCACTGGTCGGGAGCCTGCACCGGGTGTaGGCAGCTGGGCGGTGGGCACACCACCGGGTCACAGATCACCGT +
Preference number: 1 (lower is better)
Translates to: LRANRAALVGSLHRV*AAGRWAHHRVTDHR
Trigger: ACGGTGATCTGTGACCCGGTGGTGTGCCCACCGCCCAGCTGCCCACACCCGGTGCAGGCTCCCGACCAGTGCTGCCCTGTTTGCCCTGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR GCA 90 bp GATAGAGAAGCGGAGGCTAGAGCGCAGCAGCGAGACTCGGGCTCGTaGCACCGCCTGCGACCTCGGCCCTGTCAGCAGCGCCACGAAGTC +
Preference number: 1 (lower is better)
Translates to: DREAEARAQQRDSGS*HRLRPRPCQQRHEV
Trigger: GACTTCGTGGCGCTGCTGACAGGGCCGAGGTCGCAGGCGGTGGCACGAGCCCGAGTCTCGCTGCTGCGCTCTAGCCTCCGCTTCTCTATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR GCA 90 bp CTTCCTGGCAGCAATGTGTCCACTGATGCGCAGCCCTGGCCTGCCTaGCCACTCCAGGGCCATCTGCAGCTCCCCCAGCACCAGCCAGTC +
Preference number: 1 (lower is better)
Translates to: LPGSNVSTDAQPWPA*PLQGHLQLPQHQPV
Trigger: GACTGGCTGGTGCTGGGGGAGCTGCAGATGGCCCTGGAGTGGGCAGGCAGGCCAGGGCTGCGCATCAGTGGACACATTGCTGCCAGGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR CCA 90 bp GTCGCAGCTCTTCCTGGCAGCAATGTGTCCACTGATGCGCAGCCCTaGCCTGCCTGCCCACTCCAGGGCCATCTGCAGCTCCCCCAGCAC +
Preference number: 1 (lower is better)
Translates to: VAALPGSNVSTDAQP*PACPLQGHLQLPQH
Trigger: GTGCTGGGGGAGCTGCAGATGGCCCTGGAGTGGGCAGGCAGGCCAGGGCTGCGCATCAGTGGACACATTGCTGCCAGGAAGAGCTGCGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR CCA 90 bp AAACAGGGCAGCACTGGTCGGGAGCCTGCACCGGGTGTGGGCAGCTaGGCGGTGGGCACACCACCGGGTCACAGATCACCGTTCGTCTCT +
Preference number: 1 (lower is better)
Translates to: KQGSTGREPAPGVGS*AVGTPPGHRSPFVS
Trigger: AGAGACGAACGGTGATCTGTGACCCGGTGGTGTGCCCACCGCCCAGCTGCCCACACCCGGTGCAGGCTCCCGACCAGTGCTGCCCTGTTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR GCA 90 bp ACATCTTGTTTCTCAGGGCAAACAGGGCAGCACTGGTCGGGAGCCTaGACCGGGTGTGGGCAGCTGGGCGGTGGGCACACCACCGGGTCA +
Preference number: 1 (lower is better)
Translates to: TSCFSGQTGQHWSGA*TGCGQLGGGHTTGS
Trigger: TGACCCGGTGGTGTGCCCACCGCCCAGCTGCCCACACCCGGTGCAGGCTCCCGACCAGTGCTGCCCTGTTTGCCCTGAGAAACAAGATGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR TCA 90 bp CACTTTGCAGGACGTCGCAGCTCTTCCTGGCAGCAATGTGTCCACTaGTGCGCAGCCCTGGCCTGCCTGCCCACTCCAGGGCCATCTGCA +
Preference number: 1 (lower is better)
Translates to: HFAGRRSSSWQQCVH*CAALACLPTPGPSA
Trigger: TGCAGATGGCCCTGGAGTGGGCAGGCAGGCCAGGGCTGCGCATCAGTGGACACATTGCTGCCAGGAAGAGCTGCGACGTCCTGCAAAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR TCA 90 bp TCCTTGGTGCCCACGTTCAGGAAGAGCTCATTCTGCAGCAGCATATaGGCCCCTCGGGCACCCAGCCCAGGGCAGATACCCACGGCCGTG +
Preference number: 1 (lower is better)
Translates to: SLVPTFRKSSFCSSI*APRAPSPGQIPTAV
Trigger: CACGGCCGTGGGTATCTGCCCTGGGCTGGGTGCCCGAGGGGCTCATATGCTGCTGCAGAATGAGCTCTTCCTGAACGTGGGCACCAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR GCA 90 bp CCGTGTGTCCTCCTGGCTGGAGTCCAGCCATGTGGCACAGGACAGTaGGCTGATCCCTCCGCTGAGGCTTGGTCTCCAGTGTCATGGCCA +
Preference number: 1 (lower is better)
Translates to: PCVLLAGVQPCGTGQ*ADPSAEAWSPVSWP
Trigger: TGGCCATGACACTGGAGACCAAGCCTCAGCGGAGGGATCAGCGCACTGTCCTGTGCCACATGGCTGGACTCCAGCCAGGAGGACACACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR TCA 90 bp GGTGGGGGCTGCAGGGTGCTCAAACAGGACACTGCCATTGGAGTCTaGGAAGCGGATCCTGGTAGGGCGGTCCAGCCGCCTGTAGGAGAT +
Preference number: 1 (lower is better)
Translates to: GGGCRVLKQDTAIGV*EADPGRAVQPPVGD
Trigger: ATCTCCTACAGGCGGCTGGACCGCCCTACCAGGATCCGCTTCTCAGACTCCAATGGCAGTGTCCTGTTTGAGCACCCTGCAGCCCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR GCA 90 bp GGGCAGCCACGTGCCCCCGAAGCTCTCCGTCTGGGAAGTCCTTGGTaGCCACGTTCAGGAAGAGCTCATTCTGCAGCAGCATATGAGCCC +
Preference number: 1 (lower is better)
Translates to: GQPRAPEALRLGSPW*PRSGRAHSAAAYEP
Trigger: GGGCTCATATGCTGCTGCAGAATGAGCTCTTCCTGAACGTGGGCACCAAGGACTTCCCAGACGGAGAGCTTCGGGGGCACGTGGCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR CCA 90 bp CCATTTCCTAGCAGCGTGAGGCTGGCTGAGCCGGCAGCACCCGTCTaGACTGGGATCAGGGCATCAGCCCCACAAAGGACACTTTGCAGG +
Preference number: 1 (lower is better)
Translates to: PFPSSVRLAEPAAPV*TGIRASAPQRTLCR
Trigger: CCTGCAAAGTGTCCTTTGTGGGGCTGATGCCCTGATCCCAGTCCAGACGGGTGCTGCCGGCTCAGCCAGCCTCACGCTGCTAGGAAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR TCA 90 bp CTACCACTTGCACCTGATAGATCAGGGAGCCATTTCCTAGCAGCGTaGGGCTGGCTGAGCCGGCAGCACCCGTCTGGACTGGGATCAGGG +
Preference number: 1 (lower is better)
Translates to: LPLAPDRSGSHFLAA*GWLSRQHPSGLGSG
Trigger: CCCTGATCCCAGTCCAGACGGGTGCTGCCGGCTCAGCCAGCCTCACGCTGCTAGGAAATGGCTCCCTGATCTATCAGGTGCAAGTGGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR CCA 90 bp GCAGGGCAGCCACGTGCCCCCGAAGCTCTCCGTCTGGGAAGTCCTTaGTGCCCACGTTCAGGAAGAGCTCATTCTGCAGCAGCATATGAG +
Preference number: 1 (lower is better)
Translates to: AGQPRAPEALRLGSP*CPRSGRAHSAAAYE
Trigger: CTCATATGCTGCTGCAGAATGAGCTCTTCCTGAACGTGGGCACCAAGGACTTCCCAGACGGAGAGCTTCGGGGGCACGTGGCTGCCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR CCA 90 bp GGACAGTGCGCTGATCCCTCCGCTGAGGCTTGGTCTCCAGTGTCATaGCCACCACCTCACTGCTTGTCCCTACCACTTGCACCTGATAGA +
Preference number: 1 (lower is better)
Translates to: GQCADPSAEAWSPVS*PPPHCLSLPLAPDR
Trigger: TCTATCAGGTGCAAGTGGTAGGGACAAGCAGTGAGGTGGTGGCCATGACACTGGAGACCAAGCCTCAGCGGAGGGATCAGCGCACTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR TCA 90 bp GGGCAAACAGGGCAGCACTGGTCGGGAGCCTGCACCGGGTGTGGGCAGCTGGGCGGGCCCGGTGCCGGATaGGAGGCCCCCAGACCTCCC +
Preference number: 2 (lower is better)
Translates to: GQTGQHWSGACTGCGQLGGPGAG*EAPRPP
Trigger: GGGAGGTCTGGGGGCCTCTCATCCGGCACCGGGCCC...GCCCAGCTGCCCACACCCGGTGCAGGCTCCCGACCAGTGCTGCCCTGTTTGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448472.5
3UTR-3UTR CCA 90 bp GCGCAGCAGCGAGACTCGGGCTCGTGCCACCGCCTGCGACCTCGGCCCTGTCAGCAGTGTCCCGGCAGCTaGCGCGGCTGCCCACAGGCC +
Preference number: 2 (lower is better)
Translates to: AQQRDSGSCHRLRPRPCQQCPGS*RGCPQA
Trigger: GGCCTGTGGGCAGCCGCGCCAGCTGCCGGGACACTG...CTGACAGGGCCGAGGTCGCAGGCGGTGGCACGAGCCCGAGTCTCGCTGCTGCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR-3UTR CCA 90 bp GGCGGGCGCTATGCCCACAGTAGGGCAGGGCAGCCACGTGCCCCCGAAGCTCTCCCCTGCCAGGGCCCCTaGTACGGCGACCCCACTGAG +
Preference number: 2 (lower is better)
Translates to: GGRYAHSRAGQPRAPEALPCQGP*YGDPTE
Trigger: CTCAGTGGGGTCGCCGTACCAGGGGCCCTGGCAGGG...GAGAGCTTCGGGGGCACGTGGCTGCCCTGCCCTACTGTGGGCATAGCGCCCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000448472.5
3UTR-3UTR CCA 90 bp CCCTGTCAGCAGCGCCACGAAGTCCGTGTGGCCGTCACCACGGGCCCGCTCCTCGCTGTGACCTCGGTCTaGCCCAGCTGCCTCTCCCCC +
Preference number: 2 (lower is better)
Translates to: PCQQRHEVRVAVTTGPLLAVTSV*PSCLSP
Trigger: GGGGGAGAGGCAGCTGGGCCAGACCGAGGTCACAGC...GAGGAGCGGGCCCGTGGTGACGGCCACACGGACTTCGTGGCGCTGCTGACAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448472.5
3UTR-3UTR CCA 90 bp CACCCTGGGCCTCTGAGCCATAGAATCCCTTCAGCAGCCGCCGAGGCCCTGGCGCCGGGTGTGGGCAGCTaGGCGGTGGGCACACCACCG +
Preference number: 2 (lower is better)
Translates to: HPGPLSHRIPSAAAEALAPGVGS*AVGTPP
Trigger: CGGTGGTGTGCCCACCGCCCAGCTGCCCACACCCGG...CGCCAGGGCCTCGGCGGCTGCTGAAGGGATTCTATGGCTCAGAGGCCCAGGGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR CAA 90 bp AAGAAGCATGTGTTGGGGTCTCGGGGCCGCCCAGGACCACCAGGTTaGGCGGGCGCTAGGGCCGGGAGACCAGGCACCACAGGCGGCGCA +
Preference number: 2 (lower is better)
Translates to: KKHVLGSRGRPGPPG*AGARAGRPGTTGGA
Trigger: TGCGCCGCCTGTGGTGCCTGGTCTCCCGGCCCTAGCGCCCGCCAAACCTGGTGGTCCTGGGCGGCCCCGAGACCCCAACACATGCTTCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR GCA 90 bp CTCGTGCCACCGCCTGCGACCTCGGCCCTGTCAGCAGCGCCACGAAGTCCGTGTCAGCCCTGGCCTGCCTaGCCACTCCAGGGCCATCTG +
Preference number: 2 (lower is better)
Translates to: LVPPPATSALSAAPRSPCQPWPA*PLQGHL
Trigger: CAGATGGCCCTGGAGTGGGCAGGCAGGCCAGGGCTG...ACACGGACTTCGTGGCGCTGCTGACAGGGCCGAGGTCGCAGGCGGTGGCACGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448472.5
3UTR-3UTR GCA 90 bp GGCCGCCCAGGACCACCAGGTTTGGCGGGCGCTAGGGCCGGGAGACCAGGCACCATGCCTTTTGCCAGGTaGCGCAGCAGTTCCGGCTCC +
Preference number: 2 (lower is better)
Translates to: GRPGPPGLAGARAGRPGTMPFAR*RSSSGS
Trigger: GGAGCCGGAACTGCTGCGGCACCTGGCAAAAGGCAT...GGTGCCTGGTCTCCCGGCCCTAGCGCCCGCCAAACCTGGTGGTCCTGGGCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp CTGGGGCTGGCCGCCGGTGGGCCGTGCAGCGGGAACAGCATCGACTCTCCTTCCGAACTGCTGCGCTCCTaGGGGCAGGTCTGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: LGLAAGGPCSGNSIDSPSELLRS*GQVWQQ
Trigger: CTGCTGCCAGACCTGCCCCCAGGAGCGCAGCAGTTC...GGAAGGAGAGTCGATGCTGTTCCCGCTGCACGGCCCACCGGCGGCCAGCCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448472.5
3UTR-3UTR TCA 90 bp GGCACAACGGGGTGCCACCGCGTACCCGCTGCCCGCCAGCTCCGGTCACCATCAGACTTGGAGTGGCTGTaGCCTCGGTCTGGCCCAGCT +
Preference number: 2 (lower is better)
Translates to: GTTGCHRVPAARQLRSPSDLEWL*PRSGPA
Trigger: AGCTGGGCCAGACCGAGGTCACAGCCACTCCAAGTC...TGATGGTGACCGGAGCTGGCGGGCAGCGGGTACGCGGTGGCACCCCGTTGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR TCA 90 bp GGCGGGCGCTATGCCCACAGTAGGGCAGGGCAGCCACGTGCCCCCGAAGCTCTCCATTTCCTAGCAGCGTaGGGCTGGCTGAGCCGGCAG +
Preference number: 2 (lower is better)
Translates to: GGRYAHSRAGQPRAPEALHFLAA*GWLSRQ
Trigger: CTGCCGGCTCAGCCAGCCTCACGCTGCTAGGAAATG...GAGAGCTTCGGGGGCACGTGGCTGCCCTGCCCTACTGTGGGCATAGCGCCCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR TCA 90 bp GGCCGCCCAGGACCACCAGGTTTGGCGGGCGCTAGGGCCGGGAGACCAGGCACCCACACCCTGGGCCTCTaGGCCATAGAATCCCTTCAG +
Preference number: 2 (lower is better)
Translates to: GRPGPPGLAGARAGRPGTHTLGL*AIESLQ
Trigger: CTGAAGGGATTCTATGGCTCAGAGGCCCAGGGTGTG...GGTGCCTGGTCTCCCGGCCCTAGCGCCCGCCAAACCTGGTGGTCCTGGGCGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR GCA 90 bp GGCCGCCCAGGACCACCAGGTTTGGCGGGCGCTAGGGCCGGGAGACCAGGCACCAAGGAAAGCCAGGCGTaGCCTGCTGCTTGGCTCTTC +
Preference number: 2 (lower is better)
Translates to: GRPGPPGLAGARAGRPGTKESQA*PAAWLF
Trigger: GAAGAGCCAAGCAGCAGGGCACGCCTGGCTTTCCTT...GGTGCCTGGTCTCCCGGCCCTAGCGCCCGCCAAACCTGGTGGTCCTGGGCGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR GCA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGACCACCGCGTACCCGCTaGCCGCCAGCTCCGGTCACC +
Preference number: 2 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGPPRTR*PPAPVT
Trigger: GGTGACCGGAGCTGGCGGGCAGCGGGTACGCGGTGG...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR GCA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTGCCGCCGGTGGGCCGTaGAGCGGGAACAGCATCGAC +
Preference number: 2 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGAAGGP*SGNSID
Trigger: GTCGATGCTGTTCCCGCTGCACGGCCCACCGGCGGC...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp GAGGCCATGCCTTTTGCCAGGTGCCGCAGCAGTTCCGGCTCCAGGTCCTTCACCCAGTGTCCCGGCAGCTaGCGCGGCTGCCCACAGGCC +
Preference number: 2 (lower is better)
Translates to: EAMPFARCRSSSGSRSFTQCPGS*RGCPQA
Trigger: GGCCTGTGGGCAGCCGCGCCAGCTGCCGGGACACTG...GGTGAAGGACCTGGAGCCGGAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448472.5
3UTR-3UTR CCA 90 bp AGCGCCTGGCTCCCCGCGGTCGCTATAACTGCGATGCTCCGGGTCCCGCGGATATCCTGGGGGCAGGTCTaGCAGCAGTGTCCCGGCAGC +
Preference number: 2 (lower is better)
Translates to: SAWLPAVAITAMLRVPRISWGQV*QQCPGS
Trigger: GCTGCCGGGACACTGCTGCCAGACCTGCCCCCAGGA...TATCCGCGGGACCCGGAGCATCGCAGTTATAGCGACCGCGGGGAGCCAGGCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR-3UTR CCA 90 bp CACCCTGGGCCTCTGAGCCATAGAATCCCTTCAGCAGCCGCCGAGGCCCTGGCGTCCTGGGGGCAGGTCTaGCAGCAGTGTCCCGGCAGC +
Preference number: 2 (lower is better)
Translates to: HPGPLSHRIPSAAAEALASWGQV*QQCPGS
Trigger: GCTGCCGGGACACTGCTGCCAGACCTGCCCCCAGGA...CGCCAGGGCCTCGGCGGCTGCTGAAGGGATTCTATGGCTCAGAGGCCCAGGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448472.5
3UTR-3UTR CCA 90 bp GGCGGGCGCTATGCCCACAGTAGGGCAGGGCAGCCACGTGCCCCCGAAGCTCTCAGCACCCGTCTGGACTaGGATCAGGGCATCAGCCCC +
Preference number: 2 (lower is better)
Translates to: GGRYAHSRAGQPRAPEALSTRLD*DQGISP
Trigger: GGGGCTGATGCCCTGATCCCAGTCCAGACGGGTGCT...GAGAGCTTCGGGGGCACGTGGCTGCCCTGCCCTACTGTGGGCATAGCGCCCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp CACCCTGGGCCTCTGAGCCATAGAATCCCTTCAGCAGCCGCCGAGGCCCTGGCGCAGGACCACCAGGTTTaGCGGGCGCTAGGGCCGGGA +
Preference number: 2 (lower is better)
Translates to: HPGPLSHRIPSAAAEALAQDHQV*RALGPG
Trigger: TCCCGGCCCTAGCGCCCGCCAAACCTGGTGGTCCTG...CGCCAGGGCCTCGGCGGCTGCTGAAGGGATTCTATGGCTCAGAGGCCCAGGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp CACCCTGGGCCTCTGAGCCATAGAATCCCTTCAGCAGCCGCCGAGGCCCTGGCGTGGGCAGCTGGGCGGTaGGCACACCACCGGGTCACA +
Preference number: 2 (lower is better)
Translates to: HPGPLSHRIPSAAAEALAWAAGR*AHHRVT
Trigger: TGTGACCCGGTGGTGTGCCCACCGCCCAGCTGCCCA...CGCCAGGGCCTCGGCGGCTGCTGAAGGGATTCTATGGCTCAGAGGCCCAGGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR GCA 90 bp AGCGAGACTCGGGCTCGTGCCACCGCCTGCGACCTCGGCCCTGTCAGCAGCGCCCAAGAAGGTCCTCGATaGCACCCCTTCCCCAGCTCA +
Preference number: 2 (lower is better)
Translates to: SETRARATACDLGPVSSAQEGPR*HPFPSS
Trigger: TGAGCTGGGGAAGGGGTGGCATCGAGGACCTTCTTG...GGCGCTGCTGACAGGGCCGAGGTCGCAGGCGGTGGCACGAGCCCGAGTCTCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448472.5
3UTR-3UTR GCA 90 bp ATTGGTTGGCTATGTGCACCTGCCCTCGGAGCTCCCCTCTGGGGCTACCCTTGGGCAGCCAGGGCCCGGTaGCGGATGAGAGGCCCCCAG +
Preference number: 2 (lower is better)
Translates to: IGWLCAPALGAPLWGYPWAARAR*RMRGPQ
Trigger: CTGGGGGCCTCTCATCCGGCACCGGGCCCTGGCTGC...CCAAGGGTAGCCCCAGAGGGGAGCTCCGAGGGCAGGTGCACATAGCCAACCAAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448472.5
3UTR-3UTR CCA 90 bp CACCCTGGGCCTCTGAGCCATAGAATCCCTTCAGCAGCCGCCGAGGCCCTGGCGACGGGCAGCGTGTCATaGCGGGCGCTATGCCCACAG +
Preference number: 2 (lower is better)
Translates to: HPGPLSHRIPSAAAEALATGSVS*RALCPQ
Trigger: CTGTGGGCATAGCGCCCGCCATGACACGCTGCCCGT...CGCCAGGGCCTCGGCGGCTGCTGAAGGGATTCTATGGCTCAGAGGCCCAGGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp GGGGTGCCACCGCGTACCCGCTGCCCGCCAGCTCCGGTCACCATCAAAATAGCAAGAGCGGGTCGTAGTTaGGCGCCCAGCGAGCCCCGT +
Preference number: 2 (lower is better)
Translates to: GVPPRTRCPPAPVTIKIARAGRS*APSEPR
Trigger: ACGGGGCTCGCTGGGCGCCCAACTACGACCCGCTCT...TGCTATTTTGATGGTGACCGGAGCTGGCGGGCAGCGGGTACGCGGTGGCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR TCA 90 bp GGGCAAACAGGGCAGCACTGGTCGGGAGCCTGCACCGGGTGTGGGCAGCTGGGCACCTCCCCTGAAGGGTaGGTGAGTGTCACAAGTGCC +
Preference number: 2 (lower is better)
Translates to: GQTGQHWSGACTGCGQLGTSPEG*VSVTSA
Trigger: GGCACTTGTGACACTCACTCACCCTTCAGGGGAGGT...GCCCAGCTGCCCACACCCGGTGCAGGCTCCCGACCAGTGCTGCCCTGTTTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448472.5
3UTR-3UTR TCA 90 bp ATGTGCACCTGCCCTCGGAGCTCCCCTCTGGGGCTACCCTTGGTGGTGATCATCCAGCGTGAGGCTGGCTaGGCCGGCAGCACCCGTCTG +
Preference number: 2 (lower is better)
Translates to: MCTCPRSSPLGLPLVVIIQREAG*AGSTRL
Trigger: CAGACGGGTGCTGCCGGCTCAGCCAGCCTCACGCTG...GATGATCACCACCAAGGGTAGCCCCAGAGGGGAGCTCCGAGGGCAGGTGCACAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR GCA 90 bp CCCCCGAAGCTCTCCGTCTGGGAAGTCCTTGGTGCCCACGTTCAGGAAGAGCTCGCTCGTGCCACCGCCTaGGACCTCGGCCCTGTCAGC +
Preference number: 2 (lower is better)
Translates to: PPKLSVWEVLGAHVQEELARATA*DLGPVS
Trigger: GCTGACAGGGCCGAGGTCGCAGGCGGTGGCACGAGC...GAGCTCTTCCTGAACGTGGGCACCAAGGACTTCCCAGACGGAGAGCTTCGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448472.5
3UTR-3UTR GCA 90 bp GAGGCCATGCCTTTTGCCAGGTGCCGCAGCAGTTCCGGCTCCAGGTCCTTCACCGGCACTGAAGGTCTCTaGAGCCAGGGCCCGGTGCCG +
Preference number: 2 (lower is better)
Translates to: EAMPFARCRSSSGSRSFTGTEGL*SQGPVP
Trigger: CGGCACCGGGCCCTGGCTGCAGAGACCTTCAGTGCC...GGTGAAGGACCTGGAGCCGGAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448472.5
3UTR-3UTR GCA 90 bp GGGGTGCCACCGCGTACCCGCTGCCCGCCAGCTCCGGTCACCATCAAAATAGCACCAGGCGTGCCCTGCTaGTTGGCTCTTCACAGGGGG +
Preference number: 2 (lower is better)
Translates to: GVPPRTRCPPAPVTIKIAPGVPC*LALHRG
Trigger: CCCCCTGTGAAGAGCCAAGCAGCAGGGCACGCCTGG...TGCTATTTTGATGGTGACCGGAGCTGGCGGGCAGCGGGTACGCGGTGGCACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp GGCCGTCACCACGGGCCCGCTCCTCAGCGCCTGGCTCCCCGCGGTCGCTATAACGAGGAGCAAAGGCACTaGGCTTCCCACAGGAGAATG +
Preference number: 2 (lower is better)
Translates to: GRHHGPAPQRLAPRGRYNEEQRH*ASHRRM
Trigger: CATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTC...GTTATAGCGACCGCGGGGAGCCAGGCGCTGAGGAGCGGGCCCGTGGTGACGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448472.5
3UTR-3UTR CCA 90 bp CAGCGTGTCATGGCGGGCGCTATGCCCACAGTAGGGCAGGGCAGCCACGTGCCCTGCCTCTCCCCCTTGTaGAGCTGTGGTTCCCAGAGG +
Preference number: 2 (lower is better)
Translates to: QRVMAGAMPTVGQGSHVPCLSPL*SCGSQR
Trigger: CCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCA...GGGCACGTGGCTGCCCTGCCCTACTGTGGGCATAGCGCCCGCCATGACACGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp CACCCTGGGCCTCTGAGCCATAGAATCCCTTCAGCAGCCGCCGAGGCCCTGGCGGGCCGTGTGTCCTCCTaGCTGGAGTCCAGCCATGTG +
Preference number: 2 (lower is better)
Translates to: HPGPLSHRIPSAAAEALAGRVSS*LESSHV
Trigger: CACATGGCTGGACTCCAGCCAGGAGGACACACGGCC...CGCCAGGGCCTCGGCGGCTGCTGAAGGGATTCTATGGCTCAGAGGCCCAGGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR TCA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTGACTTGGAGTGGCTGTaGCCTCGGTCTGGCCCAGCT +
Preference number: 2 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGDLEWL*PRSGPA
Trigger: AGCTGGGCCAGACCGAGGTCACAGCCACTCCAAGTC...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
3UTR-3UTR GCA 90 bp GGGCACACCACCGGGTCACAGATCACCGTTCGTCTCTGGCAGGTGCAGAGTGAGCAGCCCTGGCCTGCCTaGCCACTCCAGGGCCATCTG +
Preference number: 2 (lower is better)
Translates to: GHTTGSQITVRLWQVQSEQPWPA*PLQGHL
Trigger: CAGATGGCCCTGGAGTGGGCAGGCAGGCCAGGGCTG...CTCACTCTGCACCTGCCAGAGACGAACGGTGATCTGTGACCCGGTGGTGTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR GCA 90 bp GGCACAACGGGGTGCCACCGCGTACCCGCTGCCCGCCAGCTCCGGTCACCATCATGGCCACCACCTCACTaGTTGTCCCTACCACTTGCA +
Preference number: 2 (lower is better)
Translates to: GTTGCHRVPAARQLRSPSWPPPH*LSLPLA
Trigger: TGCAAGTGGTAGGGACAAGCAGTGAGGTGGTGGCCA...TGATGGTGACCGGAGCTGGCGGGCAGCGGGTACGCGGTGGCACCCCGTTGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR GCA 90 bp GGCACAGGACAGTGCGCTGATCCCTCCGCTGAGGCTTGGTCTCCAGTGTCATGGGGCAGGGCAGCCACGTaGCCCCGAAGCTCTCCGTCT +
Preference number: 2 (lower is better)
Translates to: GTGQCADPSAEAWSPVSWGRAAT*PRSSPS
Trigger: AGACGGAGAGCTTCGGGGGCACGTGGCTGCCCTGCC...CCATGACACTGGAGACCAAGCCTCAGCGGAGGGATCAGCGCACTGTCCTGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp ATCATCAGGGAGGCCATGCCTTTTGCCAGGTGCCGCAGCAGTTCCGGCTCCAGGCAGGGGCAGCAGGAGTaGAGTGTCGGGGGCCCTTGG +
Preference number: 2 (lower is better)
Translates to: IIREAMPFARCRSSSGSRQGQQE*SVGGPW
Trigger: CCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTG...CCTGGAGCCGGAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTCCCTGATGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp ACCAGGGCTCCTGCTAGGGGCACGGGCAGCGTGTCATGGCGGGCGCTATGCCCAAGCCAGTCCATCTCCTaGACTGTCAGGTTGGGCAGC +
Preference number: 2 (lower is better)
Translates to: TRAPARGTGSVSWRALCPSQSIS*TVRLGS
Trigger: GCTGCCCAACCTGACAGTCCAGGAGATGGACTGGCT...TGGGCATAGCGCCCGCCATGACACGCTGCCCGTGCCCCTAGCAGGAGCCCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp CACCCTGGGCCTCTGAGCCATAGAATCCCTTCAGCAGCCGCCGAGGCCCTGGCGCCCTCCGCTGAGGCTTaGTCTCCAGTGTCATGGCCA +
Preference number: 2 (lower is better)
Translates to: HPGPLSHRIPSAAAEALAPSAEA*SPVSWP
Trigger: TGGCCATGACACTGGAGACCAAGCCTCAGCGGAGGG...CGCCAGGGCCTCGGCGGCTGCTGAAGGGATTCTATGGCTCAGAGGCCCAGGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp GTGGTGATCATCAGGGAGGCCATGCCTTTTGCCAGGTGCCGCAGCAGTTCCGGCCAGGACCACCAGGTTTaGCGGGCGCTAGGGCCGGGA +
Preference number: 2 (lower is better)
Translates to: VVIIREAMPFARCRSSSGQDHQV*RALGPG
Trigger: TCCCGGCCCTAGCGCCCGCCAAACCTGGTGGTCCTG...GCCGGAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTCCCTGATGATCACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp GGCACAACGGGGTGCCACCGCGTACCCGCTGCCCGCCAGCTCCGGTCACCATCAATCACCGTTCGTCTCTaGCAGGTGCAGAGTGAGCAG +
Preference number: 2 (lower is better)
Translates to: GTTGCHRVPAARQLRSPSITVRL*QVQSEQ
Trigger: CTGCTCACTCTGCACCTGCCAGAGACGAACGGTGAT...TGATGGTGACCGGAGCTGGCGGGCAGCGGGTACGCGGTGGCACCCCGTTGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp GGGGTGCCACCGCGTACCCGCTGCCCGCCAGCTCCGGTCACCATCAAAATAGCATGGGTCCCGGCTCCTTaGCAGCCCTGGCAAGTCTCT +
Preference number: 2 (lower is better)
Translates to: GVPPRTRCPPAPVTIKIAWVPAP*QPWQVS
Trigger: AGAGACTTGCCAGGGCTGCCAAGGAGCCGGGACCCA...TGCTATTTTGATGGTGACCGGAGCTGGCGGGCAGCGGGTACGCGGTGGCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR TCA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGAGAGGGGTGCCAGCTCTaGCTCTCTGGGAACCACTGC +
Preference number: 2 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGEGCQL*LSGNHC
Trigger: GCAGTGGTTCCCAGAGAGTCAGAGCTGGCACCCCTC...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR GCA 90 bp ACAAGTGCCACATGCAGCTGTTCTGCCCTAAGGAGCCGCAGAGACAACCGAGGCGCTCGTGCCACCGCCTaGGACCTCGGCCCTGTCAGC +
Preference number: 2 (lower is better)
Translates to: TSATCSCSALRSRRDNRGARATA*DLGPVS
Trigger: GCTGACAGGGCCGAGGTCGCAGGCGGTGGCACGAGC...GCCTCGGTTGTCTCTGCGGCTCCTTAGGGCAGAACAGCTGCATGTGGCACTTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR-3UTR GCA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTTTGGCTATGTGCACCTaGCCTCGGAGCTCCCCTCTG +
Preference number: 2 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGLAMCT*PRSSPL
Trigger: CAGAGGGGAGCTCCGAGGGCAGGTGCACATAGCCAA...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp CTTGGGTGGGGGCTGCAGGGTGCTCAAACAGGACACTGCCATTGGAGTCTGAGACCCTGCCAGGGCCCCTaGTACGGCGACCCCACTGAG +
Preference number: 2 (lower is better)
Translates to: LGWGLQGAQTGHCHWSLRPCQGP*YGDPTE
Trigger: CTCAGTGGGGTCGCCGTACCAGGGGCCCTGGCAGGG...TCTCAGACTCCAATGGCAGTGTCCTGTTTGAGCACCCTGCAGCCCCCACCCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR-3UTR CCA 90 bp CTTGGGTGGGGGCTGCAGGGTGCTCAAACAGGACACTGCCATTGGAGTCTGAGAGCCACGAAGTCCGTGTaGCCGTCACCACGGGCCCGC +
Preference number: 2 (lower is better)
Translates to: LGWGLQGAQTGHCHWSLRATKSV*PSPRAR
Trigger: GCGGGCCCGTGGTGACGGCCACACGGACTTCGTGGC...TCTCAGACTCCAATGGCAGTGTCCTGTTTGAGCACCCTGCAGCCCCCACCCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR-3UTR CCA 90 bp GGCACAGGACAGTGCGCTGATCCCTCCGCTGAGGCTTGGTCTCCAGTGTCATGGACTGATGCGCAGCCCTaGCCTGCCTGCCCACTCCAG +
Preference number: 2 (lower is better)
Translates to: GTGQCADPSAEAWSPVSWTDAQP*PACPLQ
Trigger: CTGGAGTGGGCAGGCAGGCCAGGGCTGCGCATCAGT...CCATGACACTGGAGACCAAGCCTCAGCGGAGGGATCAGCGCACTGTCCTGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp AAGGAAAGCCAGGCGTGCCCTGCTGCTTGGCTCTTCACAGGGGGTAGCACCAGGACTGATGCGCAGCCCTaGCCTGCCTGCCCACTCCAG +
Preference number: 2 (lower is better)
Translates to: KESQACPAAWLFTGGSTRTDAQP*PACPLQ
Trigger: CTGGAGTGGGCAGGCAGGCCAGGGCTGCGCATCAGT...CCTGGTGCTACCCCCTGTGAAGAGCCAAGCAGCAGGGCACGCCTGGCTTTCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp ACCAGGGCTCCTGCTAGGGGCACGGGCAGCGTGTCATGGCGGGCGCTATGCCCATGGTCTCCAGTGTCATaGCCACCACCTCACTGCTTG +
Preference number: 2 (lower is better)
Translates to: TRAPARGTGSVSWRALCPWSPVS*PPPHCL
Trigger: CAAGCAGTGAGGTGGTGGCCATGACACTGGAGACCA...TGGGCATAGCGCCCGCCATGACACGCTGCCCGTGCCCCTAGCAGGAGCCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR CAA 90 bp CCATCTTGGGTGGGGGCTGCAGGGTGCTCAAACAGGACACTGCCATaGGAGTCTGAGAAGCGGATCCTGGTAGGGCGGTCCAGCCGCCTG +
Preference number: 2 (lower is better)
Translates to: PSWVGAAGCSNRTLP*ESEKRILVGRSSRL
Trigger: CAGGCGGCTGGACCGCCCTACCAGGATCCGCTTCTCAGACTCCAATGGCAGTGTCCTGTTTGAGCACCCTGCAGCCCCCACCCAAGATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR-3UTR GCA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTTCATCAGGGAGGCCATaGCTTTTGCCAGGTGCCGCA +
Preference number: 2 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGSSGRP*LLPGAA
Trigger: TGCGGCACCTGGCAAAAGGCATGGCCTCCCTGATGA...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp GAGGCCATGCCTTTTGCCAGGTGCCGCAGCAGTTCCGGCTCCAGGTCCTTCACCCAGGCCCCATCCTCTTaGTCACTTGGCCCTCTGGCT +
Preference number: 2 (lower is better)
Translates to: EAMPFARCRSSSGSRSFTQAPSS*SLGPLA
Trigger: AGCCAGAGGGCCAAGTGACCAAGAGGATGGGGCCTG...GGTGAAGGACCTGGAGCCGGAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp TCAGGGGCAGCAGGAGTGGAGTGTCGGGGGCCCTTGGTGCTGAGTGAAGATAAAGCTGTGACCTCGGTCTaGCCCAGCTGCCTCTCCCCC +
Preference number: 2 (lower is better)
Translates to: SGAAGVECRGPLVLSEDKAVTSV*PSCLSP
Trigger: GGGGGAGAGGCAGCTGGGCCAGACCGAGGTCACAGC...TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
3UTR-3UTR CCA 90 bp ATCATCAGGGAGGCCATGCCTTTTGCCAGGTGCCGCAGCAGTTCCGGCTCCAGGCCGGCAGCACCCGTCTaGACTGGGATCAGGGCATCA +
Preference number: 2 (lower is better)
Translates to: IIREAMPFARCRSSSGSRPAAPV*TGIRAS
Trigger: TGATGCCCTGATCCCAGTCCAGACGGGTGCTGCCGG...CCTGGAGCCGGAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTCCCTGATGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp AAGGAAAGCCAGGCGTGCCCTGCTGCTTGGCTCTTCACAGGGGGTAGCACCAGGGGCCGTGTGTCCTCCTaGCTGGAGTCCAGCCATGTG +
Preference number: 2 (lower is better)
Translates to: KESQACPAAWLFTGGSTRGRVSS*LESSHV
Trigger: CACATGGCTGGACTCCAGCCAGGAGGACACACGGCC...CCTGGTGCTACCCCCTGTGAAGAGCCAAGCAGCAGGGCACGCCTGGCTTTCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp GTGGTGATCATCAGGGAGGCCATGCCTTTTGCCAGGTGCCGCAGCAGTTCCGGCGGCCCCCGACCCCACTaGACACTGTTTGCAGCAGTC +
Preference number: 2 (lower is better)
Translates to: VVIIREAMPFARCRSSSGGPRPH*TLFAAV
Trigger: GACTGCTGCAAACAGTGTCCAGTGGGGTCGGGGGCC...GCCGGAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTCCCTGATGATCACCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR TCA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTGCCCTGGCAAGTCTCTaGCATCTTGTTTCTCAGGGC +
Preference number: 2 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGALASL*HLVSQG
Trigger: GCCCTGAGAAACAAGATGTCAGAGACTTGCCAGGGC...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR GCA 90 bp CCCCCGAAGCTCTCCGTCTGGGAAGTCCTTGGTGCCCACGTTCAGGAAGAGCTCAAGCCAGGCGTGCCCTaGTGCTTGGCTCTTCACAGG +
Preference number: 2 (lower is better)
Translates to: PPKLSVWEVLGAHVQEELKPGVP*CLALHR
Trigger: CCTGTGAAGAGCCAAGCAGCAGGGCACGCCTGGCTT...GAGCTCTTCCTGAACGTGGGCACCAAGGACTTCCCAGACGGAGAGCTTCGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTGAGGAGCAAAGGCACTaGGCTTCCCACAGGAGAATG +
Preference number: 2 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGEEQRH*ASHRRM
Trigger: CATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTC...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
3UTR-3UTR CCA 90 bp CCCCCGAAGCTCTCCGTCTGGGAAGTCCTTGGTGCCCACGTTCAGGAAGAGCTCCCCCTTGTGGAGCTGTaGTTCCCAGAGGTAGTGGGG +
Preference number: 2 (lower is better)
Translates to: PPKLSVWEVLGAHVQEELPLVEL*FPEVVG
Trigger: CCCCACTACCTCTGGGAACCACAGCTCCACAAGGGG...GAGCTCTTCCTGAACGTGGGCACCAAGGACTTCCCAGACGGAGAGCTTCGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp ATGTGCACCTGCCCTCGGAGCTCCCCTCTGGGGCTACCCTTGGTGGTGATCATCTGGCAGGGCAGGACTTaGAGTGGCTGTGACCTCGGT +
Preference number: 2 (lower is better)
Translates to: MCTCPRSSPLGLPLVVIIWQGRT*SGCDLG
Trigger: ACCGAGGTCACAGCCACTCCAAGTCCTGCCCTGCCA...GATGATCACCACCAAGGGTAGCCCCAGAGGGGAGCTCCGAGGGCAGGTGCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp CCCCGCGGTCGCTATAACTGCGATGCTCCGGGTCCCGCGGATACTCGAAGGACACCCACAGGCCGGGGTTaGGCACTCTGGTTTGATGTT +
Preference number: 2 (lower is better)
Translates to: PRGRYNCDAPGPADTRRTPTGRG*ALWFDV
Trigger: AACATCAAACCAGAGTGCCCAACCCCGGCCTGTGGG...TGTCCTTCGAGTATCCGCGGGACCCGGAGCATCGCAGTTATAGCGACCGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR-3UTR CCA 90 bp ATTGGTTGGCTATGTGCACCTGCCCTCGGAGCTCCCCTCTGGGGCTACCCTTGGGTGTGTCCTCCTGGCTaGAGTCCAGCCATGTGGCAC +
Preference number: 2 (lower is better)
Translates to: IGWLCAPALGAPLWGYPWVCPPG*SPAMWH
Trigger: GTGCCACATGGCTGGACTCCAGCCAGGAGGACACAC...CCAAGGGTAGCCCCAGAGGGGAGCTCCGAGGGCAGGTGCACATAGCCAACCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp AGCCGCAGAGACAACCGAGGCACTGCCCGCCACACCCCACAGACCAGGCCATCTCGTCTGGGAAGTCCTTaGTGCCCACGTTCAGGAAGA +
Preference number: 2 (lower is better)
Translates to: SRRDNRGTARHTPQTRPSRLGSP*CPRSGR
Trigger: TCTTCCTGAACGTGGGCACCAAGGACTTCCCAGACG...AGATGGCCTGGTCTGTGGGGTGTGGCGGGCAGTGCCTCGGTTGTCTCTGCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448472.5
3UTR-3UTR CCA 90 bp GGGGTGCCACCGCGTACCCGCTGCCCGCCAGCTCCGGTCACCATCAAAATAGCACCGCCAACCTCACATTaGTTGGCTATGTGCACCTGC +
Preference number: 2 (lower is better)
Translates to: GVPPRTRCPPAPVTIKIAPPTSH*LAMCTC
Trigger: GCAGGTGCACATAGCCAACCAATGTGAGGTTGGCGG...TGCTATTTTGATGGTGACCGGAGCTGGCGGGCAGCGGGTACGCGGTGGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR TCA 90 bp ACAAGTGCCACATGCAGCTGTTCTGCCCTAAGGAGCCGCAGAGACAACCGAGGCGACTTGGAGTGGCTGTaGCCTCGGTCTGGCCCAGCT +
Preference number: 2 (lower is better)
Translates to: TSATCSCSALRSRRDNRGDLEWL*PRSGPA
Trigger: AGCTGGGCCAGACCGAGGTCACAGCCACTCCAAGTC...GCCTCGGTTGTCTCTGCGGCTCCTTAGGGCAGAACAGCTGCATGTGGCACTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448472.5
3UTR-3UTR TCA 90 bp TCAGGGGCAGCAGGAGTGGAGTGTCGGGGGCCCTTGGTGCTGAGTGAAGATAAACAGCAATGTGTCCACTaGTGCGCAGCCCTGGCCTGC +
Preference number: 2 (lower is better)
Translates to: SGAAGVECRGPLVLSEDKQQCVH*CAALAC
Trigger: GCAGGCCAGGGCTGCGCATCAGTGGACACATTGCTG...TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR TCA 90 bp TGGGAAGTCCTTGGTGCCCACGTTCAGGAAGAGCTCATTCTGCAGCAGCATATGCAGCGTGAGGCTGGCTaGGCCGGCAGCACCCGTCTG +
Preference number: 2 (lower is better)
Translates to: WEVLGAHVQEELILQQHMQREAG*AGSTRL
Trigger: CAGACGGGTGCTGCCGGCTCAGCCAGCCTCACGCTG...CATATGCTGCTGCAGAATGAGCTCTTCCTGAACGTGGGCACCAAGGACTTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR GCA 90 bp GGTGGTGATCATCAGGGAGGCCATGCCTTTTGCCAGGTGCCGCAGCAGTTCCGGCAAGAAGGTCCTCGATaGCACCCCTTCCCCAGCTCA +
Preference number: 2 (lower is better)
Translates to: GGDHQGGHAFCQVPQQFRQEGPR*HPFPSS
Trigger: TGAGCTGGGGAAGGGGTGGCATCGAGGACCTTCTTG...CCGGAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTCCCTGATGATCACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR GCA 90 bp AAGGAAAGCCAGGCGTGCCCTGCTGCTTGGCTCTTCACAGGGGGTAGCACCAGGTTCGTCTCTGGCAGGTaGAGAGTGAGCAGAGCGGGT +
Preference number: 2 (lower is better)
Translates to: KESQACPAAWLFTGGSTRFVSGR*RVSRAG
Trigger: ACCCGCTCTGCTCACTCTGCACCTGCCAGAGACGAA...CCTGGTGCTACCCCCTGTGAAGAGCCAAGCAGCAGGGCACGCCTGGCTTTCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp CGCAGAGACAACCGAGGCACTGCCCGCCACACCCCACAGACCAGGCCATCTTGGCGGGGTTGGGCACTCTaGTTTGATGTTCTTGCAGCT +
Preference number: 2 (lower is better)
Translates to: RRDNRGTARHTPQTRPSWRGWAL*FDVLAA
Trigger: AGCTGCAAGAACATCAAACCAGAGTGCCCAACCCCG...CCAAGATGGCCTGGTCTGTGGGGTGTGGCGGGCAGTGCCTCGGTTGTCTCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR-3UTR CCA 90 bp GCACCCGTCTGGACTGGGATCAGGGCATCAGCCCCACAAAGGACACTTTGCAGGGTGTGTCCTCCTGGCTaGAGTCCAGCCATGTGGCAC +
Preference number: 2 (lower is better)
Translates to: APVWTGIRASAPQRTLCRVCPPG*SPAMWH
Trigger: GTGCCACATGGCTGGACTCCAGCCAGGAGGACACAC...CCTGCAAAGTGTCCTTTGTGGGGCTGATGCCCTGATCCCAGTCCAGACGGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGACCGCCAACCTCACATTaGTTGGCTATGTGCACCTGC +
Preference number: 2 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGPPTSH*LAMCTC
Trigger: GCAGGTGCACATAGCCAACCAATGTGAGGTTGGCGG...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR GCA 90 bp GCAGGGTGCTCAAACAGGACACTGCCATTGGAGTCTGAGAAGCGGATCCTGGTACGCGGTCGCTATAACTaGGATGCTCCGGGTCCCGCG +
Preference number: 2 (lower is better)
Translates to: AGCSNRTLPLESEKRILVRGRYN*DAPGPA
Trigger: CGCGGGACCCGGAGCATCGCAGTTATAGCGACCGCG...TACCAGGATCCGCTTCTCAGACTCCAATGGCAGTGTCCTGTTTGAGCACCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR-3UTR GCA 90 bp GGCACAGGACAGTGCGCTGATCCCTCCGCTGAGGCTTGGTCTCCAGTGTCATGGCACATGCAGCTGTTCTaGCCTAAGGAGCCGCAGAGA +
Preference number: 2 (lower is better)
Translates to: GTGQCADPSAEAWSPVSWHMQLF*PKEPQR
Trigger: TCTCTGCGGCTCCTTAGGGCAGAACAGCTGCATGTG...CCATGACACTGGAGACCAAGCCTCAGCGGAGGGATCAGCGCACTGTCCTGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448472.5
3UTR-3UTR GCA 90 bp GTGGTGATCATCAGGGAGGCCATGCCTTTTGCCAGGTGCCGCAGCAGTTCCGGCCTGGGAAGTCCTTGGTaGCCACGTTCAGGAAGAGCT +
Preference number: 2 (lower is better)
Translates to: VVIIREAMPFARCRSSSGLGSPW*PRSGRA
Trigger: AGCTCTTCCTGAACGTGGGCACCAAGGACTTCCCAG...GCCGGAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTCCCTGATGATCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR GCA 90 bp GGCACAGGACAGTGCGCTGATCCCTCCGCTGAGGCTTGGTCTCCAGTGTCATGGCTGGGAAGTCCTTGGTaGCCACGTTCAGGAAGAGCT +
Preference number: 2 (lower is better)
Translates to: GTGQCADPSAEAWSPVSWLGSPW*PRSGRA
Trigger: AGCTCTTCCTGAACGTGGGCACCAAGGACTTCCCAG...CCATGACACTGGAGACCAAGCCTCAGCGGAGGGATCAGCGCACTGTCCTGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp GCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCAGGCCCCATCCTCTTaGTCACTTGGCCCTCTGGCT +
Preference number: 2 (lower is better)
Translates to: AKALGFPQENARRSSMPPQAPSS*SLGPLA
Trigger: AGCCAGAGGGCCAAGTGACCAAGAGGATGGGGCCTG...GGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
3UTR-3UTR CCA 90 bp TCAGGGGCAGCAGGAGTGGAGTGTCGGGGGCCCTTGGTGCTGAGTGAAGATAAACAGGCCCCATCCTCTTaGTCACTTGGCCCTCTGGCT +
Preference number: 2 (lower is better)
Translates to: SGAAGVECRGPLVLSEDKQAPSS*SLGPLA
Trigger: AGCCAGAGGGCCAAGTGACCAAGAGGATGGGGCCTG...TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
3UTR-3UTR CCA 90 bp GGGCACACCACCGGGTCACAGATCACCGTTCGTCTCTGGCAGGTGCAGAGTGAGGAGGAGCAAAGGCACTaGGCTTCCCACAGGAGAATG +
Preference number: 2 (lower is better)
Translates to: GHTTGSQITVRLWQVQSEEEQRH*ASHRRM
Trigger: CATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTC...CTCACTCTGCACCTGCCAGAGACGAACGGTGATCTGTGACCCGGTGGTGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp TCAGGGGCAGCAGGAGTGGAGTGTCGGGGGCCCTTGGTGCTGAGTGAAGATAAATGCCTCTCCCCCTTGTaGAGCTGTGGTTCCCAGAGG +
Preference number: 2 (lower is better)
Translates to: SGAAGVECRGPLVLSEDKCLSPL*SCGSQR
Trigger: CCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCA...TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
3UTR-3UTR CCA 90 bp TGGGAAGTCCTTGGTGCCCACGTTCAGGAAGAGCTCATTCTGCAGCAGCATATGGCTGTGACCTCGGTCTaGCCCAGCTGCCTCTCCCCC +
Preference number: 2 (lower is better)
Translates to: WEVLGAHVQEELILQQHMAVTSV*PSCLSP
Trigger: GGGGGAGAGGCAGCTGGGCCAGACCGAGGTCACAGC...CATATGCTGCTGCAGAATGAGCTCTTCCTGAACGTGGGCACCAAGGACTTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp AACAGGACACTGCCATTGGAGTCTGAGAAGCGGATCCTGGTAGGGCGGTCCAGCTGGCAGGGCAGGACTTaGAGTGGCTGTGACCTCGGT +
Preference number: 2 (lower is better)
Translates to: NRTLPLESEKRILVGRSSWQGRT*SGCDLG
Trigger: ACCGAGGTCACAGCCACTCCAAGTCCTGCCCTGCCA...GCTGGACCGCCCTACCAGGATCCGCTTCTCAGACTCCAATGGCAGTGTCCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448472.5
3UTR-3UTR CCA 90 bp GTGGTGATCATCAGGGAGGCCATGCCTTTTGCCAGGTGCCGCAGCAGTTCCGGCCGTCTGGGAAGTCCTTaGTGCCCACGTTCAGGAAGA +
Preference number: 2 (lower is better)
Translates to: VVIIREAMPFARCRSSSGRLGSP*CPRSGR
Trigger: TCTTCCTGAACGTGGGCACCAAGGACTTCCCAGACG...GCCGGAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTCCCTGATGATCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR TCA 90 bp AGAAGCATGTGTTGGGGTCTCGGGGCCGCCCAGGACCACCAGGTTTGGCGGGCGATCCCAACAAGCCAGTaGCATTATGTACAGGAGGAA +
Preference number: 2 (lower is better)
Translates to: RSMCWGLGAAQDHQVWRAIPTSQ*HYVQEE
Trigger: TTCCTCCTGTACATAATGTCACTGGCTTGTTGGGAT...CGCCCGCCAAACCTGGTGGTCCTGGGCGGCCCCGAGACCCCAACACATGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR TCA 90 bp TTGGCCCTCTGGCTGCTCCCTAAGAGCCTTCGGCTTCTTTCTCCAGCTCTGGATGGCTACCCTTGGTGGTaGTCATCAGGGAGGCCATGC +
Preference number: 2 (lower is better)
Translates to: LALWLLPKSLRLLSPALDGYPWW*SSGRPC
Trigger: GCATGGCCTCCCTGATGATCACCACCAAGGGTAGCC...ATCCAGAGCTGGAGAAAGAAGCCGAAGGCTCTTAGGGAGCAGCCAGAGGGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR GCA 90 bp GAGGCCATGCCTTTTGCCAGGTGCCGCAGCAGTTCCGGCTCCAGGTCCTTCACCAGTGAGTGTCACAAGTaGCACATGCAGCTGTTCTGC +
Preference number: 2 (lower is better)
Translates to: EAMPFARCRSSSGSRSFTSECHK*HMQLFC
Trigger: GCAGAACAGCTGCATGTGGCACTTGTGACACTCACT...GGTGAAGGACCTGGAGCCGGAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448472.5
3UTR-3UTR GCA 90 bp TTGGCCCTCTGGCTGCTCCCTAAGAGCCTTCGGCTTCTTTCTCCAGCTCTGGATAAGCCAGGCGTGCCCTaGTGCTTGGCTCTTCACAGG +
Preference number: 2 (lower is better)
Translates to: LALWLLPKSLRLLSPALDKPGVP*CLALHR
Trigger: CCTGTGAAGAGCCAAGCAGCAGGGCACGCCTGGCTT...ATCCAGAGCTGGAGAAAGAAGCCGAAGGCTCTTAGGGAGCAGCCAGAGGGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR GCA 90 bp GCACCCGTCTGGACTGGGATCAGGGCATCAGCCCCACAAAGGACACTTTGCAGGAGTTCTCGCAGTAGCTaGCCCTGGTGTAGAATCCCC +
Preference number: 2 (lower is better)
Translates to: APVWTGIRASAPQRTLCRSSRSS*PWCRIP
Trigger: GGGGATTCTACACCAGGGGCAGCTACTGCGAGAACT...CCTGCAAAGTGTCCTTTGTGGGGCTGATGCCCTGATCCCAGTCCAGACGGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448472.5
3UTR-3UTR CCA 90 bp AAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTCAGGCCCCATCCTCTTaGTCACTTGGCCCTCTGGCT +
Preference number: 2 (lower is better)
Translates to: KGTGLPTGECKKVLDATPQAPSS*SLGPLA
Trigger: AGCCAGAGGGCCAAGTGACCAAGAGGATGGGGCCTG...AGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
3UTR-3UTR CCA 90 bp ACAAGTGCCACATGCAGCTGTTCTGCCCTAAGGAGCCGCAGAGACAACCGAGGCCCCACAGGCCGGGGTTaGGCACTCTGGTTTGATGTT +
Preference number: 2 (lower is better)
Translates to: TSATCSCSALRSRRDNRGPTGRG*ALWFDV
Trigger: AACATCAAACCAGAGTGCCCAACCCCGGCCTGTGGG...GCCTCGGTTGTCTCTGCGGCTCCTTAGGGCAGAACAGCTGCATGTGGCACTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR-3UTR CCA 90 bp GTGGTGATCATCAGGGAGGCCATGCCTTTTGCCAGGTGCCGCAGCAGTTCCGGCACAGGACACTGCCATTaGAGTCTGAGAAGCGGATCC +
Preference number: 2 (lower is better)
Translates to: VVIIREAMPFARCRSSSGTGHCH*SLRSGS
Trigger: GGATCCGCTTCTCAGACTCCAATGGCAGTGTCCTGT...GCCGGAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTCCCTGATGATCACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448472.5
3UTR-3UTR CCA 90 bp CACGTTCAGGAAGAGCTCATTCTGCAGCAGCATATGAGCCCCTCGGGCACCCAGAGCCAGTCCATCTCCTaGACTGTCAGGTTGGGCAGC +
Preference number: 2 (lower is better)
Translates to: HVQEELILQQHMSPSGTQSQSIS*TVRLGS
Trigger: GCTGCCCAACCTGACAGTCCAGGAGATGGACTGGCT...CTGGGTGCCCGAGGGGCTCATATGCTGCTGCAGAATGAGCTCTTCCTGAACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp AGTCCTTGGTGCCCACGTTCAGGAAGAGCTCATTCTGCAGCAGCATATGAGCCCCAGGCCCCATCCTCTTaGTCACTTGGCCCTCTGGCT +
Preference number: 2 (lower is better)
Translates to: SPWCPRSGRAHSAAAYEPQAPSS*SLGPLA
Trigger: AGCCAGAGGGCCAAGTGACCAAGAGGATGGGGCCTG...GGGCTCATATGCTGCTGCAGAATGAGCTCTTCCTGAACGTGGGCACCAAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp TGGGAAGTCCTTGGTGCCCACGTTCAGGAAGAGCTCATTCTGCAGCAGCATATGAGCACCCGTCTGGACTaGGATCAGGGCATCAGCCCC +
Preference number: 2 (lower is better)
Translates to: WEVLGAHVQEELILQQHMSTRLD*DQGISP
Trigger: GGGGCTGATGCCCTGATCCCAGTCCAGACGGGTGCT...CATATGCTGCTGCAGAATGAGCTCTTCCTGAACGTGGGCACCAAGGACTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CCA 90 bp ACAAGTGCCACATGCAGCTGTTCTGCCCTAAGGAGCCGCAGAGACAACCGAGGCTGGTCTCCAGTGTCATaGCCACCACCTCACTGCTTG +
Preference number: 2 (lower is better)
Translates to: TSATCSCSALRSRRDNRGWSPVS*PPPHCL
Trigger: CAAGCAGTGAGGTGGTGGCCATGACACTGGAGACCA...GCCTCGGTTGTCTCTGCGGCTCCTTAGGGCAGAACAGCTGCATGTGGCACTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448472.5
3UTR-3UTR CCA 90 bp CTGAGACATTGGCCTGAAGTTCTCGCAGTAGCTGCCCCTGGTGTAGAATCCCCACCGAAGCTCTCCGTCTaGGAAGTCCTTGGTGCCCAC +
Preference number: 2 (lower is better)
Translates to: LRHWPEVLAVAAPGVESPPKLSV*EVLGAH
Trigger: GTGGGCACCAAGGACTTCCCAGACGGAGAGCTTCGG...TGGGGATTCTACACCAGGGGCAGCTACTGCGAGAACTTCAGGCCAATGTCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448472.5
3UTR-3UTR CCA 90 bp ATACAAAACTCTCCAATAATGACTCTGCTCAGCTCAGGGGCAGCAGGAGTGGAGTGCCTCTCCCCCTTGTaGAGCTGTGGTTCCCAGAGG +
Preference number: 2 (lower is better)
Translates to: IQNSPIMTLLSSGAAGVECLSPL*SCGSQR
Trigger: CCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCA...CTCCACTCCTGCTGCCCCTGAGCTGAGCAGAGTCATTATTGGAGAGTTTTGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
3UTR GCA 72 bp GCGGAGGCTAGAGCGCAGCAGCGAGACTCGGGCTCGTaGCACCGCCTGCGACCTCGGCCCTGTCAGCAGCGC +
Preference number: 3 (lower is better)
Translates to: AEARAQQRDSGS*HRLRPRPCQQR
Trigger: GCGCTGCTGACAGGGCCGAGGTCGCAGGCGGTGGCACGAGCCCGAGTCTCGCTGCTGCGCTCTAGCCTCCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR CCA 72 bp AGGCCGCTCGGCTGCCGCTCCGAACTGCTGCGCTCCTaGGGGCAGGTCTGGCAGCAGTGTCCCGGCAGCTGG +
Preference number: 3 (lower is better)
Translates to: RPLGCRSELLRS*GQVWQQCPGSW
Trigger: CCAGCTGCCGGGACACTGCTGCCAGACCTGCCCCCAGGAGCGCAGCAGTTCGGAGCGGCAGCCGAGCGGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR GCA 72 bp GGGTCCCGCGGATACTCGAAGGACAGGCCGCTCGGCTaGCGCTCCGAACTGCTGCGCTCCTGGGGGCAGGTC +
Preference number: 3 (lower is better)
Translates to: GSRGYSKDRPLG*RSELLRSWGQV
Trigger: GACCTGCCCCCAGGAGCGCAGCAGTTCGGAGCGGCAGCCGAGCGGCCTGTCCTTCGAGTATCCGCGGGACCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR GCA 72 bp GAGCGCAGCAGCGAGACTCGGGCTCGTGCCACCGCCTaGGACCTCGGCCCTGTCAGCAGCGCCACGAAGTCC +
Preference number: 3 (lower is better)
Translates to: ERSSETRARATA*DLGPVSSATKS
Trigger: GGACTTCGTGGCGCTGCTGACAGGGCCGAGGTCGCAGGCGGTGGCACGAGCCCGAGTCTCGCTGCTGCGCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR CCA 72 bp CGTGTGGCCGTCACCACGGGCCCGCTCCTCAGCGCCTaGCTCCCCGCGGTCGCTATAACTGCGATGCTCCGG +
Preference number: 3 (lower is better)
Translates to: RVAVTTGPLLSA*LPAVAITAMLR
Trigger: CCGGAGCATCGCAGTTATAGCGACCGCGGGGAGCCAGGCGCTGAGGAGCGGGCCCGTGGTGACGGCCACACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR CCA 72 bp TGTTGGGGTCTCGGGGCCGCCCAGGACCACCAGGTTTaGCGGGCGCTAGGGCCGGGAGACCAGGCACCACAG +
Preference number: 3 (lower is better)
Translates to: CWGLGAAQDHQV*RALGPGDQAPQ
Trigger: CTGTGGTGCCTGGTCTCCCGGCCCTAGCGCCCGCCAAACCTGGTGGTCCTGGGCGGCCCCGAGACCCCAACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR CCA 72 bp AGCACTGGTCGGGAGCCTGCACCGGGTGTGGGCAGCTaGGCGGTGGGCACACCACCGGGTCACAGATCACCG +
Preference number: 3 (lower is better)
Translates to: STGREPAPGVGS*AVGTPPGHRSP
Trigger: CGGTGATCTGTGACCCGGTGGTGTGCCCACCGCCCAGCTGCCCACACCCGGTGCAGGCTCCCGACCAGTGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR GCA 72 bp CAGTTCTGGTCTCTGGGGCTGGCCGCCGGTGGGCCGTaGAGCGGGAACAGCATCGACTCTCCTTCCCCGAGC +
Preference number: 3 (lower is better)
Translates to: QFWSLGLAAGGP*SGNSIDSPSPS
Trigger: GCTCGGGGAAGGAGAGTCGATGCTGTTCCCGCTGCACGGCCCACCGGCGGCCAGCCCCAGAGACCAGAACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR TCA 72 bp AGGCCGAGGGTGGCAGGGCAGGACTTGGAGTGGCTGTaGCCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGT +
Preference number: 3 (lower is better)
Translates to: RPRVAGQDLEWL*PRSGPAASPPC
Trigger: ACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGGTCACAGCCACTCCAAGTCCTGCCCTGCCACCCTCGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
3UTR GCA 72 bp AGGATGGCACTGAAGGTCTCTGCAGCCAGGGCCCGGTaGCGGATGAGAGGCCCCCAGACCTCCCCTGAAGGG +
Preference number: 3 (lower is better)
Translates to: RMALKVSAARAR*RMRGPQTSPEG
Trigger: CCCTTCAGGGGAGGTCTGGGGGCCTCTCATCCGGCACCGGGCCCTGGCTGCAGAGACCTTCAGTGCCATCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR CCA 72 bp CTGGCGCGGCTGCCCACAGGCCGGGGTTGGGCACTCTaGTTTGATGTTCTTGCAGCTGACCCTGCCAGGGCC +
Preference number: 3 (lower is better)
Translates to: LARLPTGRGWAL*FDVLAADPARA
Trigger: GGCCCTGGCAGGGTCAGCTGCAAGAACATCAAACCAGAGTGCCCAACCCCGGCCTGTGGGCAGCCGCGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR CCA 72 bp CCGGCCGCCTCCAGGCGCAGTCCGCCAACCTCACATTaGTTGGCTATGTGCACCTGCCCTCGGAGCTCCCCT +
Preference number: 3 (lower is better)
Translates to: PAASRRSPPTSH*LAMCTCPRSSP
Trigger: AGGGGAGCTCCGAGGGCAGGTGCACATAGCCAACCAATGTGAGGTTGGCGGACTGCGCCTGGAGGCGGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CAA 90 bp GTGTTGGGGTCTCGGGGCCGCCCAGGACCACCAGGTTTGGCGGGCGCTAGGGCCCCCACAAAGGACACTTaGCAGGACGTCGCAGCTCTT +
Preference number: 3 (lower is better)
Translates to: VLGSRGRPGPPGLAGARAPTKDT*QDVAAL
Trigger: AAGAGCTGCGACGTCCTGCAAAGTGTCCTTTGTGGG...GGCCCTAGCGCCCGCCAAACCTGGTGGTCCTGGGCGGCCCCGAGACCCCAACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CAA 90 bp GGGCAAACAGGGCAGCACTGGTCGGGAGCCTGCACCGGGTGTGGGCAGCTGGGCCCACCACCTCACTGCTaGTCCCTACCACTTGCACCT +
Preference number: 3 (lower is better)
Translates to: GQTGQHWSGACTGCGQLGPPPHC*SLPLAP
Trigger: AGGTGCAAGTGGTAGGGACAAGCAGTGAGGTGGTGG...GCCCAGCTGCCCACACCCGGTGCAGGCTCCCGACCAGTGCTGCCCTGTTTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CAA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTCAGCAGTCGGTGGGGTaGACACGCACAGGCTGGGCA +
Preference number: 3 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGQQSVG*TRTGWA
Trigger: TGCCCAGCCTGTGCGTGTCAACCCCACCGACTGCTG...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR GCA 72 bp GCTCCTCAGCGCCTGGCTCCCCGCGGTCGCTATAACTaGGATGCTCCGGGTCCCGCGGATACTCGAAGGACA +
Preference number: 3 (lower is better)
Translates to: APQRLAPRGRYN*DAPGPADTRRT
Trigger: TGTCCTTCGAGTATCCGCGGGACCCGGAGCATCGCAGTTATAGCGACCGCGGGGAGCCAGGCGCTGAGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR-3UTR CAA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTTCAGGCCCCATCCTCTaGGTCACTTGGCCCTCTGGC +
Preference number: 3 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGSGPIL*VTWPSG
Trigger: GCCAGAGGGCCAAGTGACCAAGAGGATGGGGCCTGA...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
3UTR-3UTR CAA 90 bp GGCCGTCACCACGGGCCCGCTCCTCAGCGCCTGGCTCCCCGCGGTCGCTATAACGTTGGGCACTCTGGTTaGATGTTCTTGCAGCTGACC +
Preference number: 3 (lower is better)
Translates to: GRHHGPAPQRLAPRGRYNVGHSG*MFLQLT
Trigger: GGTCAGCTGCAAGAACATCAAACCAGAGTGCCCAAC...GTTATAGCGACCGCGGGGAGCCAGGCGCTGAGGAGCGGGCCCGTGGTGACGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR-3UTR CAA 90 bp GGGGTGCCACCGCGTACCCGCTGCCCGCCAGCTCCGGTCACCATCAAAATAGCATCGAAGAAGCATGTGTaGGGGTCTCGGGGCCGCCCA +
Preference number: 3 (lower is better)
Translates to: GVPPRTRCPPAPVTIKIASKKHV*GSRGRP
Trigger: TGGGCGGCCCCGAGACCCCAACACATGCTTCTTCGA...TGCTATTTTGATGGTGACCGGAGCTGGCGGGCAGCGGGTACGCGGTGGCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR CCA 72 bp CTTCCTGGCAGCAATGTGTCCACTGATGCGCAGCCCTaGCCTGCCTGCCCACTCCAGGGCCATCTGCAGCTC +
Preference number: 3 (lower is better)
Translates to: LPGSNVSTDAQP*PACPLQGHLQL
Trigger: GAGCTGCAGATGGCCCTGGAGTGGGCAGGCAGGCCAGGGCTGCGCATCAGTGGACACATTGCTGCCAGGAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR CCA 72 bp AGCAGCGTGAGGCTGGCTGAGCCGGCAGCACCCGTCTaGACTGGGATCAGGGCATCAGCCCCACAAAGGACA +
Preference number: 3 (lower is better)
Translates to: SSVRLAEPAAPV*TGIRASAPQRT
Trigger: TGTCCTTTGTGGGGCTGATGCCCTGATCCCAGTCCAGACGGGTGCTGCCGGCTCAGCCAGCCTCACGCTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CAA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGATCAGGCCCCATCCTCTaGGTCACTTGGCCCTCTGGC +
Preference number: 3 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGSGPIL*VTWPSG
Trigger: GCCAGAGGGCCAAGTGACCAAGAGGATGGGGCCTGA...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
3UTR-3UTR CAA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTCCGTCTGGGAAGTCCTaGGTGCCCACGTTCAGGAAG +
Preference number: 3 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGPSGKS*VPTFRK
Trigger: CTTCCTGAACGTGGGCACCAAGGACTTCCCAGACGG...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CAA 90 bp AGCCGCAGAGACAACCGAGGCACTGCCCGCCACACCCCACAGACCAGGCCATCTCCGTCTGGGAAGTCCTaGGTGCCCACGTTCAGGAAG +
Preference number: 3 (lower is better)
Translates to: SRRDNRGTARHTPQTRPSPSGKS*VPTFRK
Trigger: CTTCCTGAACGTGGGCACCAAGGACTTCCCAGACGG...AGATGGCCTGGTCTGTGGGGTGTGGCGGGCAGTGCCTCGGTTGTCTCTGCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448472.5
3UTR GCA 72 bp TTCTGCCCTAAGGAGCCGCAGAGACAACCGAGGCACTaGCCGCCACACCCCACAGACCAGGCCATCTTGGGT +
Preference number: 3 (lower is better)
Translates to: FCPKEPQRQPRH*PPHPTDQAILG
Trigger: ACCCAAGATGGCCTGGTCTGTGGGGTGTGGCGGGCAGTGCCTCGGTTGTCTCTGCGGCTCCTTAGGGCAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR CCA 72 bp CTGACATCTTGTTTCTCAGGGCAAACAGGGCAGCACTaGTCGGGAGCCTGCACCGGGTGTGGGCAGCTGGGC +
Preference number: 3 (lower is better)
Translates to: LTSCFSGQTGQH*SGACTGCGQLG
Trigger: GCCCAGCTGCCCACACCCGGTGCAGGCTCCCGACCAGTGCTGCCCTGTTTGCCCTGAGAAACAAGATGTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR TCA 72 bp CCCACGTTCAGGAAGAGCTCATTCTGCAGCAGCATATaGGCCCCTCGGGCACCCAGCCCAGGGCAGATACCC +
Preference number: 3 (lower is better)
Translates to: PTFRKSSFCSSI*APRAPSPGQIP
Trigger: GGGTATCTGCCCTGGGCTGGGTGCCCGAGGGGCTCATATGCTGCTGCAGAATGAGCTCTTCCTGAACGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR TCA 72 bp TCGACTCTCCTTCCCCGAGCCACAGGACAGTGGCAGTaGACAGTCATCCCGCTCACAGTGAGGCACCCCTGC +
Preference number: 3 (lower is better)
Translates to: STLLPRATGQWQ*TVIPLTVRHPC
Trigger: GCAGGGGTGCCTCACTGTGAGCGGGATGACTGTTCACTGCCACTGTCCTGTGGCTCGGGGAAGGAGAGTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR GCA 72 bp CCACACCCCACAGACCAGGCCATCTTGGGTGGGGGCTaGAGGGTGCTCAAACAGGACACTGCCATTGGAGTC +
Preference number: 3 (lower is better)
Translates to: PHPTDQAILGGG*RVLKQDTAIGV
Trigger: GACTCCAATGGCAGTGTCCTGTTTGAGCACCCTGCAGCCCCCACCCAAGATGGCCTGGTCTGTGGGGTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR CCA 72 bp TGGGTATCCAAGGAAAGCCAGGCGTGCCCTGCTGCTTaGCTCTTCACAGGGGGTAGCACCAGGGCTCCTGCT +
Preference number: 3 (lower is better)
Translates to: WVSKESQACPAA*LFTGGSTRAPA
Trigger: AGCAGGAGCCCTGGTGCTACCCCCTGTGAAGAGCCAAGCAGCAGGGCACGCCTGGCTTTCCTTGGATACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CAA 90 bp CAGAGACAACCGAGGCACTGCCCGCCACACCCCACAGACCAGGCCATCTTGGGTTCTGGTTTGATGTTCTaGCAGCTGACCCTGCCAGGG +
Preference number: 3 (lower is better)
Translates to: QRQPRHCPPHPTDQAILGSGLMF*QLTLPG
Trigger: CCCTGGCAGGGTCAGCTGCAAGAACATCAAACCAGA...ACCCAAGATGGCCTGGTCTGTGGGGTGTGGCGGGCAGTGCCTCGGTTGTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR TCA 72 bp TGCAGGGTGCTCAAACAGGACACTGCCATTGGAGTCTaGGAAGCGGATCCTGGTAGGGCGGTCCAGCCGCCT +
Preference number: 3 (lower is better)
Translates to: CRVLKQDTAIGV*EADPGRAVQPP
Trigger: AGGCGGCTGGACCGCCCTACCAGGATCCGCTTCTCAGACTCCAATGGCAGTGTCCTGTTTGAGCACCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR GCA 72 bp CGTGCCCCCGAAGCTCTCCGTCTGGGAAGTCCTTGGTaGCCACGTTCAGGAAGAGCTCATTCTGCAGCAGCA +
Preference number: 3 (lower is better)
Translates to: RAPEALRLGSPW*PRSGRAHSAAA
Trigger: TGCTGCTGCAGAATGAGCTCTTCCTGAACGTGGGCACCAAGGACTTCCCAGACGGAGAGCTTCGGGGGCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR GCA 72 bp GTGGTGATCATCAGGGAGGCCATGCCTTTTGCCAGGTaGCGCAGCAGTTCCGGCTCCAGGTCCTTCACCACA +
Preference number: 3 (lower is better)
Translates to: VVIIREAMPFAR*RSSSGSRSFTT
Trigger: TGTGGTGAAGGACCTGGAGCCGGAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTCCCTGATGATCACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR CCA 72 bp CCACGTGCCCCCGAAGCTCTCCGTCTGGGAAGTCCTTaGTGCCCACGTTCAGGAAGAGCTCATTCTGCAGCA +
Preference number: 3 (lower is better)
Translates to: PRAPEALRLGSP*CPRSGRAHSAA
Trigger: TGCTGCAGAATGAGCTCTTCCTGAACGTGGGCACCAAGGACTTCCCAGACGGAGAGCTTCGGGGGCACGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CAA 90 bp AAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTTCAGGCCCCATCCTCTaGGTCACTTGGCCCTCTGGC +
Preference number: 3 (lower is better)
Translates to: KALGFPQENARRSSMPPLSGPIL*VTWPSG
Trigger: GCCAGAGGGCCAAGTGACCAAGAGGATGGGGCCTGA...AAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
3UTR-3UTR CAA 90 bp GGGCACACCACCGGGTCACAGATCACCGTTCGTCTCTGGCAGGTGCAGAGTGAGCCAACCTCACATTGGTaGGCTATGTGCACCTGCCCT +
Preference number: 3 (lower is better)
Translates to: GHTTGSQITVRLWQVQSEPTSHW*AMCTCP
Trigger: AGGGCAGGTGCACATAGCCAACCAATGTGAGGTTGG...CTCACTCTGCACCTGCCAGAGACGAACGGTGATCTGTGACCCGGTGGTGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CAA 90 bp GTGGTGATCATCAGGGAGGCCATGCCTTTTGCCAGGTGCCGCAGCAGTTCCGGCTCCGCCAACCTCACATaGGTTGGCTATGTGCACCTG +
Preference number: 3 (lower is better)
Translates to: VVIIREAMPFARCRSSSGSANLT*VGYVHL
Trigger: CAGGTGCACATAGCCAACCAATGTGAGGTTGGCGGA...GCCGGAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTCCCTGATGATCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CAA 90 bp AGAAGCATGTGTTGGGGTCTCGGGGCCGCCCAGGACCACCAGGTTTGGCGGGCGCAAGTCTCTGACATCTaGTTTCTCAGGGCAAACAGG +
Preference number: 3 (lower is better)
Translates to: RSMCWGLGAAQDHQVWRAQVSDI*FLRANR
Trigger: CCTGTTTGCCCTGAGAAACAAGATGTCAGAGACTTG...CGCCCGCCAAACCTGGTGGTCCTGGGCGGCCCCGAGACCCCAACACATGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR TCA 72 bp CTGGGTCCCGGCTCCTTGGCAGCCCTGGCAAGTCTCTaGCATCTTGTTTCTCAGGGCAAACAGGGCAGCACT +
Preference number: 3 (lower is better)
Translates to: LGPGSLAALASL*HLVSQGKQGST
Trigger: AGTGCTGCCCTGTTTGCCCTGAGAAACAAGATGTCAGAGACTTGCCAGGGCTGCCAAGGAGCCGGGACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR GCA 72 bp TCAGGCCCCATCCTCTTGGTCACTTGGCCCTCTGGCTaGTCCCTAAGAGCCTTCGGCTTCTTTCTCCAGCTC +
Preference number: 3 (lower is better)
Translates to: SGPILLVTWPSG*SLRAFGFFLQL
Trigger: GAGCTGGAGAAAGAAGCCGAAGGCTCTTAGGGAGCAGCCAGAGGGCCAAGTGACCAAGAGGATGGGGCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR CCA 72 bp GCTGATCCCTCCGCTGAGGCTTGGTCTCCAGTGTCATaGCCACCACCTCACTGCTTGTCCCTACCACTTGCA +
Preference number: 3 (lower is better)
Translates to: ADPSAEAWSPVS*PPPHCLSLPLA
Trigger: TGCAAGTGGTAGGGACAAGCAGTGAGGTGGTGGCCATGACACTGGAGACCAAGCCTCAGCGGAGGGATCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CAA 90 bp GTGGTGATCATCAGGGAGGCCATGCCTTTTGCCAGGTGCCGCAGCAGTTCCGGCGTTGGGCACTCTGGTTaGATGTTCTTGCAGCTGACC +
Preference number: 3 (lower is better)
Translates to: VVIIREAMPFARCRSSSGVGHSG*MFLQLT
Trigger: GGTCAGCTGCAAGAACATCAAACCAGAGTGCCCAAC...GCCGGAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTCCCTGATGATCACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448472.5
3UTR-3UTR CAA 90 bp AACAGGACACTGCCATTGGAGTCTGAGAAGCGGATCCTGGTAGGGCGGTCCAGCTCTGGTTTGATGTTCTaGCAGCTGACCCTGCCAGGG +
Preference number: 3 (lower is better)
Translates to: NRTLPLESEKRILVGRSSSGLMF*QLTLPG
Trigger: CCCTGGCAGGGTCAGCTGCAAGAACATCAAACCAGA...GCTGGACCGCCCTACCAGGATCCGCTTCTCAGACTCCAATGGCAGTGTCCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
3UTR GCA 72 bp GAGGCTTGGTCTCCAGTGTCATGGCCACCACCTCACTaGTTGTCCCTACCACTTGCACCTGATAGATCAGGG +
Preference number: 3 (lower is better)
Translates to: EAWSPVSWPPPH*LSLPLAPDRSG
Trigger: CCCTGATCTATCAGGTGCAAGTGGTAGGGACAAGCAGTGAGGTGGTGGCCATGACACTGGAGACCAAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR-3UTR CAA 90 bp ATACAAAACTCTCCAATAATGACTCTGCTCAGCTCAGGGGCAGCAGGAGTGGAGTCAGGCCCCATCCTCTaGGTCACTTGGCCCTCTGGC +
Preference number: 3 (lower is better)
Translates to: IQNSPIMTLLSSGAAGVESGPIL*VTWPSG
Trigger: GCCAGAGGGCCAAGTGACCAAGAGGATGGGGCCTGA...CTCCACTCCTGCTGCCCCTGAGCTGAGCAGAGTCATTATTGGAGAGTTTTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
3UTR-3UTR CAA 90 bp ATACAAAACTCTCCAATAATGACTCTGCTCAGCTCAGGGGCAGCAGGAGTGGAGAGCTGCCTCTCCCCCTaGTGGAGCTGTGGTTCCCAG +
Preference number: 3 (lower is better)
Translates to: IQNSPIMTLLSSGAAGVESCLSP*WSCGSQ
Trigger: CTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCT...CTCCACTCCTGCTGCCCCTGAGCTGAGCAGAGTCATTATTGGAGAGTTTTGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
3UTR-3UTR CAA 90 bp TTGGCCCTCTGGCTGCTCCCTAAGAGCCTTCGGCTTCTTTCTCCAGCTCTGGATGCTTGTCCCTACCACTaGCACCTGATAGATCAGGGA +
Preference number: 3 (lower is better)
Translates to: LALWLLPKSLRLLSPALDACPYH*HLIDQG
Trigger: TCCCTGATCTATCAGGTGCAAGTGGTAGGGACAAGC...ATCCAGAGCTGGAGAAAGAAGCCGAAGGCTCTTAGGGAGCAGCCAGAGGGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR TCA 90 bp GTGGCCGTCACCACGGGCCCGCTCCTCAGCGCCTGGCTCCCCGCGGTCGCTATACCGGGAGGCTCGGCATaGCGCGAACGGGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: VAVTTGPLLSAWLPAVAIPGGSA*RERDSW
Trigger: CCAGCTGTCCCGTTCGCGTCATGCCGAGCCTCCCGG...TATAGCGACCGCGGGGAGCCAGGCGCTGAGGAGCGGGCCCGTGGTGACGGCCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR GCA 90 bp GCGCAGCAGCGAGACTCGGGCTCGTGCCACCGCCTGCGACCTCGGCCCTGTCAGGCCGAAGGTGCAGCCTaGCGCTCCCCGAACGGGCAG +
Preference number: 4 (lower is better)
Translates to: AQQRDSGSCHRLRPRPCQAEGAA*RSPNGQ
Trigger: CTGCCCGTTCGGGGAGCGGCAGGCTGCACCTTCGGC...CTGACAGGGCCGAGGTCGCAGGCGGTGGCACGAGCCCGAGTCTCGCTGCTGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR GCA 90 bp GGCACAACGGGGTGCCACCGCGTACCCGCTGCCCGCCAGCTCCGGTCACCATCACCACCGCGTACCCGCTaGCCGCCAGCTCCGGTCACC +
Preference number: 4 (lower is better)
Translates to: GTTGCHRVPAARQLRSPSPPRTR*PPAPVT
Trigger: GGTGACCGGAGCTGGCGGGCAGCGGGTACGCGGTGG...TGATGGTGACCGGAGCTGGCGGGCAGCGGGTACGCGGTGGCACCCCGTTGTGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp TCGAAGGACAGGCCGCTCGGCTGCCGCTCCGAACTGCTGCGCTCCTGGGGGCAGCAGTGTCCCGGCAGCTaGCGCGGCTGCCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: SKDRPLGCRSELLRSWGQQCPGS*RGCPQA
Trigger: GGCCTGTGGGCAGCCGCGCCAGCTGCCGGGACACTG...CTGCCCCCAGGAGCGCAGCAGTTCGGAGCGGCAGCCGAGCGGCCTGTCCTTCGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR CCA 90 bp GAAGTCCGTGTGGCCGTCACCACGGGCCCGCTCCTCAGCGCCTGGCTCCCCGCGGCTGTGACCTCGGTCTaGCCCAGCTGCCTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: EVRVAVTTGPLLSAWLPAAVTSV*PSCLSP
Trigger: GGGGGAGAGGCAGCTGGGCCAGACCGAGGTCACAGC...CGCGGGGAGCCAGGCGCTGAGGAGCGGGCCCGTGGTGACGGCCACACGGACTTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR TCA 90 bp GGGCAAACAGGGCAGCACTGGTCGGGAGCCTGCACCGGGTGTGGGCAGCTGGGCCCGGGAGGCTCGGCATaGCGCGAACGGGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: GQTGQHWSGACTGCGQLGPGGSA*RERDSW
Trigger: CCAGCTGTCCCGTTCGCGTCATGCCGAGCCTCCCGG...GCCCAGCTGCCCACACCCGGTGCAGGCTCCCGACCAGTGCTGCCCTGTTTGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp TCGAAGGACAGGCCGCTCGGCTGCCGCTCCGAACTGCTGCGCTCCTGGGGGCAGCGAGACTCGGGCTCGTaGCACCGCCTGCGACCTCGG +
Preference number: 4 (lower is better)
Translates to: SKDRPLGCRSELLRSWGQRDSGS*HRLRPR
Trigger: CCGAGGTCGCAGGCGGTGGCACGAGCCCGAGTCTCG...CTGCCCCCAGGAGCGCAGCAGTTCGGAGCGGCAGCCGAGCGGCCTGTCCTTCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR CCA 90 bp CTGGGGCTGGCCGCCGGTGGGCCGTGCAGCGGGAACAGCATCGACTCTCCTTCCCCCTGCCAGGGCCCCTaGTACGGCGACCCCACTGAG +
Preference number: 4 (lower is better)
Translates to: LGLAAGGPCSGNSIDSPSPCQGP*YGDPTE
Trigger: CTCAGTGGGGTCGCCGTACCAGGGGCCCTGGCAGGG...GGAAGGAGAGTCGATGCTGTTCCCGCTGCACGGCCCACCGGCGGCCAGCCCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp GAAGTCCGTGTGGCCGTCACCACGGGCCCGCTCCTCAGCGCCTGGCTCCCCGCGGAACTGCTGCGCTCCTaGGGGCAGGTCTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: EVRVAVTTGPLLSAWLPAELLRS*GQVWQQ
Trigger: CTGCTGCCAGACCTGCCCCCAGGAGCGCAGCAGTTC...CGCGGGGAGCCAGGCGCTGAGGAGCGGGCCCGTGGTGACGGCCACACGGACTTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR CCA 90 bp CAGCGCCACGAAGTCCGTGTGGCCGTCACCACGGGCCCGCTCCTCAGCGCCTGGCCGCTCCTCAGCGCCTaGCTCCCCGCGGTCGCTATA +
Preference number: 4 (lower is better)
Translates to: QRHEVRVAVTTGPLLSAWPLLSA*LPAVAI
Trigger: TATAGCGACCGCGGGGAGCCAGGCGCTGAGGAGCGG...CCAGGCGCTGAGGAGCGGGCCCGTGGTGACGGCCACACGGACTTCGTGGCGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR CCA 90 bp CCCTGTCAGCAGCGCCACGAAGTCCGTGTGGCCGTCACCACGGGCCCGCTCCTCGCCACGAAGTCCGTGTaGCCGTCACCACGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: PCQQRHEVRVAVTTGPLLATKSV*PSPRAR
Trigger: GCGGGCCCGTGGTGACGGCCACACGGACTTCGTGGC...GAGGAGCGGGCCCGTGGTGACGGCCACACGGACTTCGTGGCGCTGCTGACAGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR CCA 90 bp AAGTCCGTGTGGCCGTCACCACGGGCCCGCTCCTCAGCGCCTGGCTCCCCGCGGCAGACCAGGCCATCTTaGGTGGGGGCTGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: KSVWPSPRARSSAPGSPRQTRPS*VGAAGC
Trigger: GCACCCTGCAGCCCCCACCCAAGATGGCCTGGTCTG...CCGCGGGGAGCCAGGCGCTGAGGAGCGGGCCCGTGGTGACGGCCACACGGACTT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR CCA 90 bp AGCGAGACTCGGGCTCGTGCCACCGCCTGCGACCTCGGCCCTGTCAGCAGCGCCTGGGCAGCTGGGCGGTaGGCACACCACCGGGTCACA +
Preference number: 4 (lower is better)
Translates to: SETRARATACDLGPVSSAWAAGR*AHHRVT
Trigger: TGTGACCCGGTGGTGTGCCCACCGCCCAGCTGCCCA...GGCGCTGCTGACAGGGCCGAGGTCGCAGGCGGTGGCACGAGCCCGAGTCTCGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448472.5
3UTR CAA 72 bp GTGTTGGGGTCTCGGGGCCGCCCAGGACCACCAGGTTaGGCGGGCGCTAGGGCCGGGAGACCAGGCACCACA +
Preference number: 4 (lower is better)
Translates to: VLGSRGRPGPPG*AGARAGRPGTT
Trigger: TGTGGTGCCTGGTCTCCCGGCCCTAGCGCCCGCCAAACCTGGTGGTCCTGGGCGGCCCCGAGACCCCAACAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp TGCGATGCTCCGGGTCCCGCGGATACTCGAAGGACAGGCCGCTCGGCTGCCGCTGCTCGTGCCACCGCCTaGGACCTCGGCCCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: CDAPGPADTRRTGRSAAAARATA*DLGPVS
Trigger: GCTGACAGGGCCGAGGTCGCAGGCGGTGGCACGAGC...AGCGGCAGCCGAGCGGCCTGTCCTTCGAGTATCCGCGGGACCCGGAGCATCGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR GCA 90 bp ACCAGGGCTCCTGCTAGGGGCACGGGCAGCGTGTCATGGCGGGCGCTATGCCCAGCCGCCGGTGGGCCGTaGAGCGGGAACAGCATCGAC +
Preference number: 4 (lower is better)
Translates to: TRAPARGTGSVSWRALCPAAGGP*SGNSID
Trigger: GTCGATGCTGTTCCCGCTGCACGGCCCACCGGCGGC...TGGGCATAGCGCCCGCCATGACACGCTGCCCGTGCCCCTAGCAGGAGCCCTGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp AGCGCCTGGCTCCCCGCGGTCGCTATAACTGCGATGCTCCGGGTCCCGCGGATACAGTGTCCCGGCAGCTaGCGCGGCTGCCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: SAWLPAVAITAMLRVPRIQCPGS*RGCPQA
Trigger: GGCCTGTGGGCAGCCGCGCCAGCTGCCGGGACACTG...TATCCGCGGGACCCGGAGCATCGCAGTTATAGCGACCGCGGGGAGCCAGGCGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR CCA 90 bp GGCACAACGGGGTGCCACCGCGTACCCGCTGCCCGCCAGCTCCGGTCACCATCATGGGCAGCTGGGCGGTaGGCACACCACCGGGTCACA +
Preference number: 4 (lower is better)
Translates to: GTTGCHRVPAARQLRSPSWAAGR*AHHRVT
Trigger: TGTGACCCGGTGGTGTGCCCACCGCCCAGCTGCCCA...TGATGGTGACCGGAGCTGGCGGGCAGCGGGTACGCGGTGGCACCCCGTTGTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp AAGTCCGTGTGGCCGTCACCACGGGCCCGCTCCTCAGCGCCTGGCTCCCCGCGGATAGCAGCCCTCTCCTaGGTCCCGGCTCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: KSVWPSPRARSSAPGSPRIAALS*VPAPWQ
Trigger: CTGCCAAGGAGCCGGGACCCAGGAGAGGGCTGCTAT...CCGCGGGGAGCCAGGCGCTGAGGAGCGGGCCCGTGGTGACGGCCACACGGACTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR CCA 90 bp GAAGTCCGTGTGGCCGTCACCACGGGCCCGCTCCTCAGCGCCTGGCTCCCCGCGGGCCCCCGACCCCACTaGACACTGTTTGCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: EVRVAVTTGPLLSAWLPAGPRPH*TLFAAV
Trigger: GACTGCTGCAAACAGTGTCCAGTGGGGTCGGGGGCC...CGCGGGGAGCCAGGCGCTGAGGAGCGGGCCCGTGGTGACGGCCACACGGACTTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR TCA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGAGGGCCCGGTGCCGGATaGGAGGCCCCCAGACCTCCC +
Preference number: 4 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGGPGAG*EAPRPP
Trigger: GGGAGGTCTGGGGGCCTCTCATCCGGCACCGGGCCC...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp CGCGGCTGCCCACAGGCCGGGGTTGGGCACTCTGGTTTGATGTTCTTGCAGCTGGGGCCCGGTGCCGGATaGGAGGCCCCCAGACCTCCC +
Preference number: 4 (lower is better)
Translates to: RGCPQAGVGHSGLMFLQLGPGAG*EAPRPP
Trigger: GGGAGGTCTGGGGGCCTCTCATCCGGCACCGGGCCC...CAGCTGCAAGAACATCAAACCAGAGTGCCCAACCCCGGCCTGTGGGCAGCCGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR TCA 90 bp GGCCGCCCAGGACCACCAGGTTTGGCGGGCGCTAGGGCCGGGAGACCAGGCACCGGCTACCCTTGGTGGTaGTCATCAGGGAGGCCATGC +
Preference number: 4 (lower is better)
Translates to: GRPGPPGLAGARAGRPGTGYPWW*SSGRPC
Trigger: GCATGGCCTCCCTGATGATCACCACCAAGGGTAGCC...GGTGCCTGGTCTCCCGGCCCTAGCGCCCGCCAAACCTGGTGGTCCTGGGCGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR TCA 90 bp CCCTGTCAGCAGCGCCACGAAGTCCGTGTGGCCGTCACCACGGGCCCGCTCCTCAGCAGTCGGTGGGGTTaGCACGCACAGGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: PCQQRHEVRVAVTTGPLLSSRWG*HAQAGH
Trigger: GTGCCCAGCCTGTGCGTGTCAACCCCACCGACTGCT...GAGGAGCGGGCCCGTGGTGACGGCCACACGGACTTCGTGGCGCTGCTGACAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR GCA 90 bp CAGCGTGTCATGGCGGGCGCTATGCCCACAGTAGGGCAGGGCAGCCACGTGCCCCCTTCCCGCCGAAGGTaGAGCCTGCCGCTCCCCGAA +
Preference number: 4 (lower is better)
Translates to: QRVMAGAMPTVGQGSHVPPSRRR*SLPLPE
Trigger: TTCGGGGAGCGGCAGGCTGCACCTTCGGCGGGAAGG...GGGCACGTGGCTGCCCTGCCCTACTGTGGGCATAGCGCCCGCCATGACACGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp CTCGTGCCACCGCCTGCGACCTCGGCCCTGTCAGCAGCGCCACGAAGTCCGTGTGGCACTGAAGGTCTCTaGAGCCAGGGCCCGGTGCCG +
Preference number: 4 (lower is better)
Translates to: LVPPPATSALSAAPRSPCGTEGL*SQGPVP
Trigger: CGGCACCGGGCCCTGGCTGCAGAGACCTTCAGTGCC...ACACGGACTTCGTGGCGCTGCTGACAGGGCCGAGGTCGCAGGCGGTGGCACGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR GCA 90 bp GGCACAACGGGGTGCCACCGCGTACCCGCTGCCCGCCAGCTCCGGTCACCATCACCGTGGGGGCGCTGCTaGCCCTCGAAGAAGCATGTG +
Preference number: 4 (lower is better)
Translates to: GTTGCHRVPAARQLRSPSPWGRC*PSKKHV
Trigger: CACATGCTTCTTCGAGGGGCAGCAGCGCCCCCACGG...TGATGGTGACCGGAGCTGGCGGGCAGCGGGTACGCGGTGGCACCCCGTTGTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTGGGGGCACAACGGGGTaGCACCGCGTACCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGGGTTG*HRVPAA
Trigger: GGCAGCGGGTACGCGGTGGCACCCCGTTGTGCCCCC...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp CACCCTGGGCCTCTGAGCCATAGAATCCCTTCAGCAGCCGCCGAGGCCCTGGCGGCCGCCGGTGGGCCGTaGAGCGGGAACAGCATCGAC +
Preference number: 4 (lower is better)
Translates to: HPGPLSHRIPSAAAEALAAAGGP*SGNSID
Trigger: GTCGATGCTGTTCCCGCTGCACGGCCCACCGGCGGC...CGCCAGGGCCTCGGCGGCTGCTGAAGGGATTCTATGGCTCAGAGGCCCAGGGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp CAGCGTGTCATGGCGGGCGCTATGCCCACAGTAGGGCAGGGCAGCCACGTGCCCCCGCTCCTCAGCGCCTaGCTCCCCGCGGTCGCTATA +
Preference number: 4 (lower is better)
Translates to: QRVMAGAMPTVGQGSHVPPLLSA*LPAVAI
Trigger: TATAGCGACCGCGGGGAGCCAGGCGCTGAGGAGCGG...GGGCACGTGGCTGCCCTGCCCTACTGTGGGCATAGCGCCCGCCATGACACGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp GCCGCTCGGCTGCCGCTCCGAACTGCTGCGCTCCTGGGGGCAGGTCTGGCAGCACCAGGCCATCTTGGGTaGGGGCTGCAGGGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: AARLPLRTAALLGAGLAAPGHLG*GLQGAQ
Trigger: TTGAGCACCCTGCAGCCCCCACCCAAGATGGCCTGG...TGCTGCCAGACCTGCCCCCAGGAGCGCAGCAGTTCGGAGCGGCAGCCGAGCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR CCA 90 bp GTGGCCGTCACCACGGGCCCGCTCCTCAGCGCCTGGCTCCCCGCGGTCGCTATACGAAGAAGCATGTGTTaGGGTCTCGGGGCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: VAVTTGPLLSAWLPAVAIRRSMC*GLGAAQ
Trigger: CTGGGCGGCCCCGAGACCCCAACACATGCTTCTTCG...TATAGCGACCGCGGGGAGCCAGGCGCTGAGGAGCGGGCCCGTGGTGACGGCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR CCA 90 bp TCGGGCACCCAGCCCAGGGCAGATACCCACGGCCGTGTGTCCTCCTGGCTGGAGGCTGTGACCTCGGTCTaGCCCAGCTGCCTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: SGTQPRADTHGRVSSWLEAVTSV*PSCLSP
Trigger: GGGGGAGAGGCAGCTGGGCCAGACCGAGGTCACAGC...CTCCAGCCAGGAGGACACACGGCCGTGGGTATCTGCCCTGGGCTGGGTGCCCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR TCA 90 bp GGCGGGCGCTATGCCCACAGTAGGGCAGGGCAGCCACGTGCCCCCGAAGCTCTCCAGCAATGTGTCCACTaGTGCGCAGCCCTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GGRYAHSRAGQPRAPEALQQCVH*CAALAC
Trigger: GCAGGCCAGGGCTGCGCATCAGTGGACACATTGCTG...GAGAGCTTCGGGGGCACGTGGCTGCCCTGCCCTACTGTGGGCATAGCGCCCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp ACTGCGATGCTCCGGGTCCCGCGGATACTCGAAGGACAGGCCGCTCGGCTGCCGCGCGGTCGCTATAACTaGGATGCTCCGGGTCCCGCG +
Preference number: 4 (lower is better)
Translates to: TAMLRVPRILEGQAARLPRGRYN*DAPGPA
Trigger: CGCGGGACCCGGAGCATCGCAGTTATAGCGACCGCG...CGGCAGCCGAGCGGCCTGTCCTTCGAGTATCCGCGGGACCCGGAGCATCGCAGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR GCA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTCGAGACTCGGGCTCGTaGCACCGCCTGCGACCTCGG +
Preference number: 4 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGRDSGS*HRLRPR
Trigger: CCGAGGTCGCAGGCGGTGGCACGAGCCCGAGTCTCG...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AGCGAGACTCGGGCTCGTGCCACCGCCTGCGACCTCGGCCCTGTCAGCAGCGCCGTGGGGGCTGCAGGGTaGTCAAACAGGACACTGCCA +
Preference number: 4 (lower is better)
Translates to: SETRARATACDLGPVSSAVGAAG*SNRTLP
Trigger: TGGCAGTGTCCTGTTTGAGCACCCTGCAGCCCCCAC...GGCGCTGCTGACAGGGCCGAGGTCGCAGGCGGTGGCACGAGCCCGAGTCTCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR GCA 90 bp GCGCAGCAGCGAGACTCGGGCTCGTGCCACCGCCTGCGACCTCGGCCCTGTCAGGTGGGGGCTGCAGGGTaGTCAAACAGGACACTGCCA +
Preference number: 4 (lower is better)
Translates to: AQQRDSGSCHRLRPRPCQVGAAG*SNRTLP
Trigger: TGGCAGTGTCCTGTTTGAGCACCCTGCAGCCCCCAC...CTGACAGGGCCGAGGTCGCAGGCGGTGGCACGAGCCCGAGTCTCGCTGCTGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR GCA 90 bp GCGCAGCAGCGAGACTCGGGCTCGTGCCACCGCCTGCGACCTCGGCCCTGTCAGATGCCTTTTGCCAGGTaGCGCAGCAGTTCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: AQQRDSGSCHRLRPRPCQMPFAR*RSSSGS
Trigger: GGAGCCGGAACTGCTGCGGCACCTGGCAAAAGGCAT...CTGACAGGGCCGAGGTCGCAGGCGGTGGCACGAGCCCGAGTCTCGCTGCTGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR GCA 90 bp GTGGCCGTCACCACGGGCCCGCTCCTCAGCGCCTGGCTCCCCGCGGTCGCTATAGGAGGCCATGCCTTTTaGCAGGTGCCGCAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: VAVTTGPLLSAWLPAVAIGGHAF*QVPQQF
Trigger: GAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTCC...TATAGCGACCGCGGGGAGCCAGGCGCTGAGGAGCGGGCCCGTGGTGACGGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR GCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGCCACCGCGTACCCGCTaGCCGCCAGCTCCGGTCACC +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVPPRTR*PPAPVT
Trigger: GGTGACCGGAGCTGGCGGGCAGCGGGTACGCGGTGG...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGAGGGGGCACAACGGGGTaGCACCGCGTACCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGGGTTG*HRVPAA
Trigger: GGCAGCGGGTACGCGGTGGCACCCCGTTGTGCCCCC...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GCAGAGACAACCGAGGCACTGCCCGCCACACCCCACAGACCAGGCCATCTTGGGCCCTGCCAGGGCCCCTaGTACGGCGACCCCACTGAG +
Preference number: 4 (lower is better)
Translates to: AETTEALPATPHRPGHLGPCQGP*YGDPTE
Trigger: CTCAGTGGGGTCGCCGTACCAGGGGCCCTGGCAGGG...CCCAAGATGGCCTGGTCTGTGGGGTGTGGCGGGCAGTGCCTCGGTTGTCTCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR CCA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGACAGTGTCCCGGCAGCTaGCGCGGCTGCCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGQCPGS*RGCPQA
Trigger: GGCCTGTGGGCAGCCGCGCCAGCTGCCGGGACACTG...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GGGCAAACAGGGCAGCACTGGTCGGGAGCCTGCACCGGGTGTGGGCAGCTGGGCCCAGGCCATCTTGGGTaGGGGCTGCAGGGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: GQTGQHWSGACTGCGQLGPGHLG*GLQGAQ
Trigger: TTGAGCACCCTGCAGCCCCCACCCAAGATGGCCTGG...GCCCAGCTGCCCACACCCGGTGCAGGCTCCCGACCAGTGCTGCCCTGTTTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp CTGGGGCTGGCCGCCGGTGGGCCGTGCAGCGGGAACAGCATCGACTCTCCTTCCGGCCGTGTGTCCTCCTaGCTGGAGTCCAGCCATGTG +
Preference number: 4 (lower is better)
Translates to: LGLAAGGPCSGNSIDSPSGRVSS*LESSHV
Trigger: CACATGGCTGGACTCCAGCCAGGAGGACACACGGCC...GGAAGGAGAGTCGATGCTGTTCCCGCTGCACGGCCCACCGGCGGCCAGCCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp TCGGGCACCCAGCCCAGGGCAGATACCCACGGCCGTGTGTCCTCCTGGCTGGAGACGGGCAGCGTGTCATaGCGGGCGCTATGCCCACAG +
Preference number: 4 (lower is better)
Translates to: SGTQPRADTHGRVSSWLETGSVS*RALCPQ
Trigger: CTGTGGGCATAGCGCCCGCCATGACACGCTGCCCGT...CTCCAGCCAGGAGGACACACGGCCGTGGGTATCTGCCCTGGGCTGGGTGCCCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp TGCGATGCTCCGGGTCCCGCGGATACTCGAAGGACAGGCCGCTCGGCTGCCGCTATCAGTTCTGGTCTCTaGGGCTGGCCGCCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: CDAPGPADTRRTGRSAAAISSGL*GWPPVG
Trigger: GCCCACCGGCGGCCAGCCCCAGAGACCAGAACTGAT...AGCGGCAGCCGAGCGGCCTGTCCTTCGAGTATCCGCGGGACCCGGAGCATCGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448472.5
3UTR CAA 72 bp CCCGGCCGCCTCCAGGCGCAGTCCGCCAACCTCACATaGGTTGGCTATGTGCACCTGCCCTCGGAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: PGRLQAQSANLT*VGYVHLPSELP
Trigger: GGGGAGCTCCGAGGGCAGGTGCACATAGCCAACCAATGTGAGGTTGGCGGACTGCGCCTGGAGGCGGCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR TCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGCCGGGAGGCTCGGCATaGCGCGAACGGGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVPGGSA*RERDSW
Trigger: CCAGCTGTCCCGTTCGCGTCATGCCGAGCCTCCCGG...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000204604.5
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp TGCGATGCTCCGGGTCCCGCGGATACTCGAAGGACAGGCCGCTCGGCTGCCGCTTCCCCTAGGTCCGGGTaGCACGTCTCGTCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: CDAPGPADTRRTGRSAAASPRSG*HVSSKA
Trigger: TGCCTTGGACGAGACGTGGCACCCGGACCTAGGGGA...AGCGGCAGCCGAGCGGCCTGTCCTTCGAGTATCCGCGGGACCCGGAGCATCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR GCA 90 bp ACCAGGGCTCCTGCTAGGGGCACGGGCAGCGTGTCATGGCGGGCGCTATGCCCATCCCCTAGGTCCGGGTaGCACGTCTCGTCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: TRAPARGTGSVSWRALCPSPRSG*HVSSKA
Trigger: TGCCTTGGACGAGACGTGGCACCCGGACCTAGGGGA...TGGGCATAGCGCCCGCCATGACACGCTGCCCGTGCCCCTAGCAGGAGCCCTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGCGAGACTCGGGCTCGTaGCACCGCCTGCGACCTCGG +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVRDSGS*HRLRPR
Trigger: CCGAGGTCGCAGGCGGTGGCACGAGCCCGAGTCTCG...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp GGCGGGCGCTATGCCCACAGTAGGGCAGGGCAGCCACGTGCCCCCGAAGCTCTCGTGGGGGCTGCAGGGTaGTCAAACAGGACACTGCCA +
Preference number: 4 (lower is better)
Translates to: GGRYAHSRAGQPRAPEALVGAAG*SNRTLP
Trigger: TGGCAGTGTCCTGTTTGAGCACCCTGCAGCCCCCAC...GAGAGCTTCGGGGGCACGTGGCTGCCCTGCCCTACTGTGGGCATAGCGCCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp CCTGTAGGAGATAGAGAAGCGGAGGCTAGAGCGCAGCAGCGAGACTCGGGCTCGGCAGCCAGGGCCCGGTaGCGGATGAGAGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: PVGDREAEARAQQRDSGSAARAR*RMRGPQ
Trigger: CTGGGGGCCTCTCATCCGGCACCGGGCCCTGGCTGC...CGAGCCCGAGTCTCGCTGCTGCGCTCTAGCCTCCGCTTCTCTATCTCCTACAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR GCA 90 bp GCAGAGACAACCGAGGCACTGCCCGCCACACCCCACAGACCAGGCCATCTTGGGGGCAGGGCAGCCACGTaGCCCCGAAGCTCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: AETTEALPATPHRPGHLGGRAAT*PRSSPS
Trigger: AGACGGAGAGCTTCGGGGGCACGTGGCTGCCCTGCC...CCCAAGATGGCCTGGTCTGTGGGGTGTGGCGGGCAGTGCCTCGGTTGTCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR GCA 90 bp CGAAGGACAGGCCGCTCGGCTGCCGCTCCGAACTGCTGCGCTCCTGGGGGCAGGTCATCAGGGAGGCCATaGCTTTTGCCAGGTGCCGCA +
Preference number: 4 (lower is better)
Translates to: RRTGRSAAAPNCCAPGGRSSGRP*LLPGAA
Trigger: TGCGGCACCTGGCAAAAGGCATGGCCTCCCTGATGA...CCTGCCCCCAGGAGCGCAGCAGTTCGGAGCGGCAGCCGAGCGGCCTGTCCTTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR GCA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTCACTGGTCGGGAGCCTaGACCGGGTGTGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGHWSGA*TGCGQL
Trigger: CAGCTGCCCACACCCGGTGCAGGCTCCCGACCAGTG...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGCCCTGCCAGGGCCCCTaGTACGGCGACCCCACTGAG +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVPCQGP*YGDPTE
Trigger: CTCAGTGGGGTCGCCGTACCAGGGGCCCTGGCAGGG...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTTCCTGGGGGCAGGTCTaGCAGCAGTGTCCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGSWGQV*QQCPGS
Trigger: GCTGCCGGGACACTGCTGCCAGACCTGCCCCCAGGA...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTCCGCTCCTCAGCGCCTaGCTCCCCGCGGTCGCTATA +
Preference number: 4 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGPLLSA*LPAVAI
Trigger: TATAGCGACCGCGGGGAGCCAGGCGCTGAGGAGCGG...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGCCACGAAGTCCGTGTaGCCGTCACCACGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVATKSV*PSPRAR
Trigger: GCGGGCCCGTGGTGACGGCCACACGGACTTCGTGGC...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp CTCGTGCCACCGCCTGCGACCTCGGCCCTGTCAGCAGCGCCACGAAGTCCGTGTCCAGGCCATCTTGGGTaGGGGCTGCAGGGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: LVPPPATSALSAAPRSPCPGHLG*GLQGAQ
Trigger: TTGAGCACCCTGCAGCCCCCACCCAAGATGGCCTGG...ACACGGACTTCGTGGCGCTGCTGACAGGGCCGAGGTCGCAGGCGGTGGCACGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR CCA 90 bp GGCCGTCACCACGGGCCCGCTCCTCAGCGCCTGGCTCCCCGCGGTCGCTATAACAGCCAGTCCATCTCCTaGACTGTCAGGTTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GRHHGPAPQRLAPRGRYNSQSIS*TVRLGS
Trigger: GCTGCCCAACCTGACAGTCCAGGAGATGGACTGGCT...GTTATAGCGACCGCGGGGAGCCAGGCGCTGAGGAGCGGGCCCGTGGTGACGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR CCA 90 bp GGCACAACGGGGTGCCACCGCGTACCCGCTGCCCGCCAGCTCCGGTCACCATCAGTGTGTCCTCCTGGCTaGAGTCCAGCCATGTGGCAC +
Preference number: 4 (lower is better)
Translates to: GTTGCHRVPAARQLRSPSVCPPG*SPAMWH
Trigger: GTGCCACATGGCTGGACTCCAGCCAGGAGGACACAC...TGATGGTGACCGGAGCTGGCGGGCAGCGGGTACGCGGTGGCACCCCGTTGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp GGCACAACGGGGTGCCACCGCGTACCCGCTGCCCGCCAGCTCCGGTCACCATCACCGAAGCTCTCCGTCTaGGAAGTCCTTGGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: GTTGCHRVPAARQLRSPSPKLSV*EVLGAH
Trigger: GTGGGCACCAAGGACTTCCCAGACGGAGAGCTTCGG...TGATGGTGACCGGAGCTGGCGGGCAGCGGGTACGCGGTGGCACCCCGTTGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp CGCGGCTGCCCACAGGCCGGGGTTGGGCACTCTGGTTTGATGTTCTTGCAGCTGCAGCCGCCGAGGCCCTaGCGTTCCAGGAGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: RGCPQAGVGHSGLMFLQLQPPRP*RSRRPK
Trigger: CTTGGGCCTCCTGGAACGCCAGGGCCTCGGCGGCTG...CAGCTGCAAGAACATCAAACCAGAGTGCCCAACCCCGGCCTGTGGGCAGCCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR CCA 90 bp CGCAGAGACAACCGAGGCACTGCCCGCCACACCCCACAGACCAGGCCATCTTGGCAGGACCACCAGGTTTaGCGGGCGCTAGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: RRDNRGTARHTPQTRPSWQDHQV*RALGPG
Trigger: TCCCGGCCCTAGCGCCCGCCAAACCTGGTGGTCCTG...CCAAGATGGCCTGGTCTGTGGGGTGTGGCGGGCAGTGCCTCGGTTGTCTCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR CCA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGAGCGGGTCGTAGTTaGGCGCCCAGCGAGCCCCGT +
Preference number: 4 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGRAGRS*APSEPR
Trigger: ACGGGGCTCGCTGGGCGCCCAACTACGACCCGCTCT...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGAAGCCTGCACCGGGTGTaGGCAGCTGGGCGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGSLHRV*AAGRWA
Trigger: TGCCCACCGCCCAGCTGCCCACACCCGGTGCAGGCT...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTGCCCATCAGCCTGCATaGGGTCCCCCAGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGAHQPA*GPPAGG
Trigger: ACCCCCAGCTGGGGGACCCCATGCAGGCTGATGGGC...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GGGCAAACAGGGCAGCACTGGTCGGGAGCCTGCACCGGGTGTGGGCAGCTGGGCCCCCTTGTGGAGCTGTaGTTCCCAGAGGTAGTGGGG +
Preference number: 4 (lower is better)
Translates to: GQTGQHWSGACTGCGQLGPLVEL*FPEVVG
Trigger: CCCCACTACCTCTGGGAACCACAGCTCCACAAGGGG...GCCCAGCTGCCCACACCCGGTGCAGGCTCCCGACCAGTGCTGCCCTGTTTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp GGCACAACGGGGTGCCACCGCGTACCCGCTGCCCGCCAGCTCCGGTCACCATCATGGCAGGGCAGGACTTaGAGTGGCTGTGACCTCGGT +
Preference number: 4 (lower is better)
Translates to: GTTGCHRVPAARQLRSPSWQGRT*SGCDLG
Trigger: ACCGAGGTCACAGCCACTCCAAGTCCTGCCCTGCCA...TGATGGTGACCGGAGCTGGCGGGCAGCGGGTACGCGGTGGCACCCCGTTGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp GGGGTGCCACCGCGTACCCGCTGCCCGCCAGCTCCGGTCACCATCAAAATAGCACAGGGGCAGCAGGAGTaGAGTGTCGGGGGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: GVPPRTRCPPAPVTIKIAQGQQE*SVGGPW
Trigger: CCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTG...TGCTATTTTGATGGTGACCGGAGCTGGCGGGCAGCGGGTACGCGGTGGCACCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
3UTR CAA 72 bp CGCGGCTGCCCACAGGCCGGGGTTGGGCACTCTGGTTaGATGTTCTTGCAGCTGACCCTGCCAGGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: RGCPQAGVGHSG*MFLQLTLPGPL
Trigger: CAGGGGCCCTGGCAGGGTCAGCTGCAAGAACATCAAACCAGAGTGCCCAACCCCGGCCTGTGGGCAGCCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR TCA 90 bp CGAAGGACAGGCCGCTCGGCTGCCGCTCCGAACTGCTGCGCTCCTGGGGGCAGGCCCCTGAAGGGTGAGTaGGTGTCACAAGTGCCACAT +
Preference number: 4 (lower is better)
Translates to: RRTGRSAAAPNCCAPGGRPLKGE*VSQVPH
Trigger: ATGTGGCACTTGTGACACTCACTCACCCTTCAGGGG...CCTGCCCCCAGGAGCGCAGCAGTTCGGAGCGGCAGCCGAGCGGCCTGTCCTTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR TCA 90 bp CTGGGGCTGGCCGCCGGTGGGCCGTGCAGCGGGAACAGCATCGACTCTCCTTCCACCTCCCCTGAAGGGTaGGTGAGTGTCACAAGTGCC +
Preference number: 4 (lower is better)
Translates to: LGLAAGGPCSGNSIDSPSTSPEG*VSVTSA
Trigger: GGCACTTGTGACACTCACTCACCCTTCAGGGGAGGT...GGAAGGAGAGTCGATGCTGTTCCCGCTGCACGGCCCACCGGCGGCCAGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR TCA 90 bp ACTGCGATGCTCCGGGTCCCGCGGATACTCGAAGGACAGGCCGCTCGGCTGCCGGAGTCAGGATGGCACTaGAGGTCTCTGCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TAMLRVPRILEGQAARLPESGWH*RSLQPG
Trigger: CCCTGGCTGCAGAGACCTTCAGTGCCATCCTGACTC...CGGCAGCCGAGCGGCCTGTCCTTCGAGTATCCGCGGGACCCGGAGCATCGCAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR TCA 90 bp GCCGCTCGGCTGCCGCTCCGAACTGCTGCGCTCCTGGGGGCAGGTCTGGCAGCAGCCCTGGCAAGTCTCTaGCATCTTGTTTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: AARLPLRTAALLGAGLAAALASL*HLVSQG
Trigger: GCCCTGAGAAACAAGATGTCAGAGACTTGCCAGGGC...TGCTGCCAGACCTGCCCCCAGGAGCGCAGCAGTTCGGAGCGGCAGCCGAGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR TCA 90 bp AGAAGCATGTGTTGGGGTCTCGGGGCCGCCCAGGACCACCAGGTTTGGCGGGCGGAGGGGTGCCAGCTCTaGCTCTCTGGGAACCACTGC +
Preference number: 4 (lower is better)
Translates to: RSMCWGLGAAQDHQVWRAEGCQL*LSGNHC
Trigger: GCAGTGGTTCCCAGAGAGTCAGAGCTGGCACCCCTC...CGCCCGCCAAACCTGGTGGTCCTGGGCGGCCCCGAGACCCCAACACATGCTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp CCCCGCGGTCGCTATAACTGCGATGCTCCGGGTCCCGCGGATACTCGAAGGACACCTTCCCGCCGAAGGTaGAGCCTGCCGCTCCCCGAA +
Preference number: 4 (lower is better)
Translates to: PRGRYNCDAPGPADTRRTPSRRR*SLPLPE
Trigger: TTCGGGGAGCGGCAGGCTGCACCTTCGGCGGGAAGG...TGTCCTTCGAGTATCCGCGGGACCCGGAGCATCGCAGTTATAGCGACCGCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR GCA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTCGCGGTCGCTATAACTaGGATGCTCCGGGTCCCGCG +
Preference number: 4 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGRGRYN*DAPGPA
Trigger: CGCGGGACCCGGAGCATCGCAGTTATAGCGACCGCG...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp GGTGGTGATCATCAGGGAGGCCATGCCTTTTGCCAGGTGCCGCAGCAGTTCCGGGCTCGTGCCACCGCCTaGGACCTCGGCCCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: GGDHQGGHAFCQVPQQFRARATA*DLGPVS
Trigger: GCTGACAGGGCCGAGGTCGCAGGCGGTGGCACGAGC...CCGGAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTCCCTGATGATCACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp CCCCCGAAGCTCTCCGTCTGGGAAGTCCTTGGTGCCCACGTTCAGGAAGAGCTCCGAGACTCGGGCTCGTaGCACCGCCTGCGACCTCGG +
Preference number: 4 (lower is better)
Translates to: PPKLSVWEVLGAHVQEELRDSGS*HRLRPR
Trigger: CCGAGGTCGCAGGCGGTGGCACGAGCCCGAGTCTCG...GAGCTCTTCCTGAACGTGGGCACCAAGGACTTCCCAGACGGAGAGCTTCGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGGCAGCCAGGGCCCGGTaGCGGATGAGAGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LGFPQENARRSSMPPLPQAARAR*RMRGPQ
Trigger: CTGGGGGCCTCTCATCCGGCACCGGGCCCTGGCTGC...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp CAGGCCATCTTGGGTGGGGGCTGCAGGGTGCTCAAACAGGACACTGCCATTGGAGCAGCCAGGGCCCGGTaGCGGATGAGAGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: QAILGGGCRVLKQDTAIGAARAR*RMRGPQ
Trigger: CTGGGGGCCTCTCATCCGGCACCGGGCCCTGGCTGC...TCCAATGGCAGTGTCCTGTTTGAGCACCCTGCAGCCCCCACCCAAGATGGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR GCA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGAGGCAGGGCAGCCACGTaGCCCCGAAGCTCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGGRAAT*PRSSPS
Trigger: AGACGGAGAGCTTCGGGGGCACGTGGCTGCCCTGCC...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGCAGGGCAGCCACGTaGCCCCGAAGCTCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVGRAAT*PRSSPS
Trigger: AGACGGAGAGCTTCGGGGGCACGTGGCTGCCCTGCC...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGCACTGGTCGGGAGCCTaGACCGGGTGTGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVHWSGA*TGCGQL
Trigger: CAGCTGCCCACACCCGGTGCAGGCTCCCGACCAGTG...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGGGGGGCACAACGGGGTaGCACCGCGTACCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: LGFPQENARRSSMPPLPQGGTTG*HRVPAA
Trigger: GGCAGCGGGTACGCGGTGGCACCCCGTTGTGCCCCC...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GGCACAGGACAGTGCGCTGATCCCTCCGCTGAGGCTTGGTCTCCAGTGTCATGGCCCTGCCAGGGCCCCTaGTACGGCGACCCCACTGAG +
Preference number: 4 (lower is better)
Translates to: GTGQCADPSAEAWSPVSWPCQGP*YGDPTE
Trigger: CTCAGTGGGGTCGCCGTACCAGGGGCCCTGGCAGGG...CCATGACACTGGAGACCAAGCCTCAGCGGAGGGATCAGCGCACTGTCCTGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGCAGTGTCCCGGCAGCTaGCGCGGCTGCCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: LGFPQENARRSSMPPLPQQCPGS*RGCPQA
Trigger: GGCCTGTGGGCAGCCGCGCCAGCTGCCGGGACACTG...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGTCCTGGGGGCAGGTCTaGCAGCAGTGTCCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVSWGQV*QQCPGS
Trigger: GCTGCCGGGACACTGCTGCCAGACCTGCCCCCAGGA...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GGTGGTGATCATCAGGGAGGCCATGCCTTTTGCCAGGTGCCGCAGCAGTTCCGGGCCACGAAGTCCGTGTaGCCGTCACCACGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: GGDHQGGHAFCQVPQQFRATKSV*PSPRAR
Trigger: GCGGGCCCGTGGTGACGGCCACACGGACTTCGTGGC...CCGGAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTCCCTGATGATCACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp AAGGAAAGCCAGGCGTGCCCTGCTGCTTGGCTCTTCACAGGGGGTAGCACCAGGGCCACGAAGTCCGTGTaGCCGTCACCACGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: KESQACPAAWLFTGGSTRATKSV*PSPRAR
Trigger: GCGGGCCCGTGGTGACGGCCACACGGACTTCGTGGC...CCTGGTGCTACCCCCTGTGAAGAGCCAAGCAGCAGGGCACGCCTGGCTTTCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp AGCCGCAGAGACAACCGAGGCACTGCCCGCCACACCCCACAGACCAGGCCATCTCAGACCAGGCCATCTTaGGTGGGGGCTGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: SRRDNRGTARHTPQTRPSQTRPS*VGAAGC
Trigger: GCACCCTGCAGCCCCCACCCAAGATGGCCTGGTCTG...AGATGGCCTGGTCTGTGGGGTGTGGCGGGCAGTGCCTCGGTTGTCTCTGCGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR CCA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTACTGATGCGCAGCCCTaGCCTGCCTGCCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGTDAQP*PACPLQ
Trigger: CTGGAGTGGGCAGGCAGGCCAGGGCTGCGCATCAGT...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AGCCGCAGAGACAACCGAGGCACTGCCCGCCACACCCCACAGACCAGGCCATCTACGGGCAGCGTGTCATaGCGGGCGCTATGCCCACAG +
Preference number: 4 (lower is better)
Translates to: SRRDNRGTARHTPQTRPSTGSVS*RALCPQ
Trigger: CTGTGGGCATAGCGCCCGCCATGACACGCTGCCCGT...AGATGGCCTGGTCTGTGGGGTGTGGCGGGCAGTGCCTCGGTTGTCTCTGCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR CCA 90 bp AAGGAAAGCCAGGCGTGCCCTGCTGCTTGGCTCTTCACAGGGGGTAGCACCAGGCAGCCGCCGAGGCCCTaGCGTTCCAGGAGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: KESQACPAAWLFTGGSTRQPPRP*RSRRPK
Trigger: CTTGGGCCTCCTGGAACGCCAGGGCCTCGGCGGCTG...CCTGGTGCTACCCCCTGTGAAGAGCCAAGCAGCAGGGCACGCCTGGCTTTCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGACAGGACCACCAGGTTTaGCGGGCGCTAGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGQDHQV*RALGPG
Trigger: TCCCGGCCCTAGCGCCCGCCAAACCTGGTGGTCCTG...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGAAGAGCGGGTCGTAGTTaGGCGCCCAGCGAGCCCCGT +
Preference number: 4 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGRAGRS*APSEPR
Trigger: ACGGGGCTCGCTGGGCGCCCAACTACGACCCGCTCT...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGCCGGGTGTGGGCAGCTaGGCGGTGGGCACACCACCG +
Preference number: 4 (lower is better)
Translates to: LGFPQENARRSSMPPLPQPGVGS*AVGTPP
Trigger: CGGTGGTGTGCCCACCGCCCAGCTGCCCACACCCGG...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GCCGCTCGGCTGCCGCTCCGAACTGCTGCGCTCCTGGGGGCAGGTCTGGCAGCAGCTCCTTGGCAGCCCTaGCAAGTCTCTGACATCTTG +
Preference number: 4 (lower is better)
Translates to: AARLPLRTAALLGAGLAAAPWQP*QVSDIL
Trigger: CAAGATGTCAGAGACTTGCCAGGGCTGCCAAGGAGC...TGCTGCCAGACCTGCCCCCAGGAGCGCAGCAGTTCGGAGCGGCAGCCGAGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR CCA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGAGCCCATCAGCCTGCATaGGGTCCCCCAGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGAHQPA*GPPAGG
Trigger: ACCCCCAGCTGGGGGACCCCATGCAGGCTGATGGGC...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp ATCATCAGGGAGGCCATGCCTTTTGCCAGGTGCCGCAGCAGTTCCGGCTCCAGGTCTGGTCTCTGGGGCTaGCCGCCGGTGGGCCGTGCA +
Preference number: 4 (lower is better)
Translates to: IIREAMPFARCRSSSGSRSGLWG*PPVGRA
Trigger: TGCACGGCCCACCGGCGGCCAGCCCCAGAGACCAGA...CCTGGAGCCGGAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTCCCTGATGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTATCAGTTCTGGTCTCTaGGGCTGGCCGCCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGISSGL*GWPPVG
Trigger: GCCCACCGGCGGCCAGCCCCAGAGACCAGAACTGAT...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp GGAGATAGAGAAGCGGAGGCTAGAGCGCAGCAGCGAGACTCGGGCTCGTGCCACCAGGGGCAGCAGGAGTaGAGTGTCGGGGGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: GDREAEARAQQRDSGSCHQGQQE*SVGGPW
Trigger: CCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTG...GTGGCACGAGCCCGAGTCTCGCTGCTGCGCTCTAGCCTCCGCTTCTCTATCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448472.5
3UTR CAA 72 bp GCCGCCTCCAGGCGCAGTCCGCCAACCTCACATTGGTaGGCTATGTGCACCTGCCCTCGGAGCTCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: AASRRSPPTSHW*AMCTCPRSSPL
Trigger: CAGAGGGGAGCTCCGAGGGCAGGTGCACATAGCCAACCAATGTGAGGTTGGCGGACTGCGCCTGGAGGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR TCA 90 bp CTGGGGCTGGCCGCCGGTGGGCCGTGCAGCGGGAACAGCATCGACTCTCCTTCCACTGCCATTGGAGTCTaGGAAGCGGATCCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: LGLAAGGPCSGNSIDSPSTAIGV*EADPGR
Trigger: CCTACCAGGATCCGCTTCTCAGACTCCAATGGCAGT...GGAAGGAGAGTCGATGCTGTTCCCGCTGCACGGCCCACCGGCGGCCAGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR TCA 90 bp TCGGGCACCCAGCCCAGGGCAGATACCCACGGCCGTGTGTCCTCCTGGCTGGAGACCTCCCCTGAAGGGTaGGTGAGTGTCACAAGTGCC +
Preference number: 4 (lower is better)
Translates to: SGTQPRADTHGRVSSWLETSPEG*VSVTSA
Trigger: GGCACTTGTGACACTCACTCACCCTTCAGGGGAGGT...CTCCAGCCAGGAGGACACACGGCCGTGGGTATCTGCCCTGGGCTGGGTGCCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR TCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCGGGCCCGGTGCCGGATaGGAGGCCCCCAGACCTCCC +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATGPGAG*EAPRPP
Trigger: GGGAGGTCTGGGGGCCTCTCATCCGGCACCGGGCCC...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp GTCCTTGGTGCCCACGTTCAGGAAGAGCTCATTCTGCAGCAGCATATGAGCCCCGGGCCCGGTGCCGGATaGGAGGCCCCCAGACCTCCC +
Preference number: 4 (lower is better)
Translates to: VLGAHVQEELILQQHMSPGPGAG*EAPRPP
Trigger: GGGAGGTCTGGGGGCCTCTCATCCGGCACCGGGCCC...GGGGCTCATATGCTGCTGCAGAATGAGCTCTTCCTGAACGTGGGCACCAAGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR TCA 90 bp TCGAAGGACAGGCCGCTCGGCTGCCGCTCCGAACTGCTGCGCTCCTGGGGGCAGGCTGAGACATTGGCCTaGAGTTCTCGCAGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: SKDRPLGCRSELLRSWGQAETLA*SSRSSC
Trigger: GCAGCTACTGCGAGAACTTCAGGCCAATGTCTCAGC...CTGCCCCCAGGAGCGCAGCAGTTCGGAGCGGCAGCCGAGCGGCCTGTCCTTCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR TCA 90 bp CCACAGGCCGGGGTTGGGCACTCTGGTTTGATGTTCTTGCAGCTGACCCTGCCACAGCGTGAGGCTGGCTaGGCCGGCAGCACCCGTCTG +
Preference number: 4 (lower is better)
Translates to: PQAGVGHSGLMFLQLTLPQREAG*AGSTRL
Trigger: CAGACGGGTGCTGCCGGCTCAGCCAGCCTCACGCTG...TGGCAGGGTCAGCTGCAAGAACATCAAACCAGAGTGCCCAACCCCGGCCTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR TCA 90 bp TCGGGCACCCAGCCCAGGGCAGATACCCACGGCCGTGTGTCCTCCTGGCTGGAGCACACCCTGGGCCTCTaGGCCATAGAATCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: SGTQPRADTHGRVSSWLEHTLGL*AIESLQ
Trigger: CTGAAGGGATTCTATGGCTCAGAGGCCCAGGGTGTG...CTCCAGCCAGGAGGACACACGGCCGTGGGTATCTGCCCTGGGCTGGGTGCCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp CCCCCGAAGCTCTCCGTCTGGGAAGTCCTTGGTGCCCACGTTCAGGAAGAGCTCCCTTCCCGCCGAAGGTaGAGCCTGCCGCTCCCCGAA +
Preference number: 4 (lower is better)
Translates to: PPKLSVWEVLGAHVQEELPSRRR*SLPLPE
Trigger: TTCGGGGAGCGGCAGGCTGCACCTTCGGCGGGAAGG...GAGCTCTTCCTGAACGTGGGCACCAAGGACTTCCCAGACGGAGAGCTTCGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTTCCCCTAGGTCCGGGTaGCACGTCTCGTCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGSPRSG*HVSSKA
Trigger: TGCCTTGGACGAGACGTGGCACCCGGACCTAGGGGA...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGCGCGGTCGCTATAACTaGGATGCTCCGGGTCCCGCG +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVRGRYN*DAPGPA
Trigger: CGCGGGACCCGGAGCATCGCAGTTATAGCGACCGCG...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGCGAGACTCGGGCTCGTaGCACCGCCTGCGACCTCGG +
Preference number: 4 (lower is better)
Translates to: LGFPQENARRSSMPPLPQRDSGS*HRLRPR
Trigger: CCGAGGTCGCAGGCGGTGGCACGAGCCCGAGTCTCG...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp CAGCGTGTCATGGCGGGCGCTATGCCCACAGTAGGGCAGGGCAGCCACGTGCCCATCTTGGGTGGGGGCTaGAGGGTGCTCAAACAGGAC +
Preference number: 4 (lower is better)
Translates to: QRVMAGAMPTVGQGSHVPILGGG*RVLKQD
Trigger: GTCCTGTTTGAGCACCCTGCAGCCCCCACCCAAGAT...GGGCACGTGGCTGCCCTGCCCTACTGTGGGCATAGCGCCCGCCATGACACGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp CACGTTCAGGAAGAGCTCATTCTGCAGCAGCATATGAGCCCCTCGGGCACCCAGGCAGCCAGGGCCCGGTaGCGGATGAGAGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: HVQEELILQQHMSPSGTQAARAR*RMRGPQ
Trigger: CTGGGGGCCTCTCATCCGGCACCGGGCCCTGGCTGC...CTGGGTGCCCGAGGGGCTCATATGCTGCTGCAGAATGAGCTCTTCCTGAACGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp AGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCGCAGCCAGGGCCCGGTaGCGGATGAGAGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: RHWASHRRMQEGPRCHPFAARAR*RMRGPQ
Trigger: CTGGGGGCCTCTCATCCGGCACCGGGCCCTGGCTGC...GAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp CCCCCGAAGCTCTCCGTCTGGGAAGTCCTTGGTGCCCACGTTCAGGAAGAGCTCCAGCCCTGGCCTGCCTaGCCACTCCAGGGCCATCTG +
Preference number: 4 (lower is better)
Translates to: PPKLSVWEVLGAHVQEELQPWPA*PLQGHL
Trigger: CAGATGGCCCTGGAGTGGGCAGGCAGGCCAGGGCTG...GAGCTCTTCCTGAACGTGGGCACCAAGGACTTCCCAGACGGAGAGCTTCGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp GTGTTGGGGTCTCGGGGCCGCCCAGGACCACCAGGTTTGGCGGGCGCTAGGGCCCGGGGTTGGGCACTCTaGTTTGATGTTCTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: VLGSRGRPGPPGLAGARARGWAL*FDVLAA
Trigger: AGCTGCAAGAACATCAAACCAGAGTGCCCAACCCCG...GGCCCTAGCGCCCGCCAAACCTGGTGGTCCTGGGCGGCCCCGAGACCCCAACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGAACTGCTGCGCTCCTaGGGGCAGGTCTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVELLRS*GQVWQQ
Trigger: CTGCTGCCAGACCTGCCCCCAGGAGCGCAGCAGTTC...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GGAGATAGAGAAGCGGAGGCTAGAGCGCAGCAGCGAGACTCGGGCTCGTGCCACGAACTGCTGCGCTCCTaGGGGCAGGTCTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GDREAEARAQQRDSGSCHELLRS*GQVWQQ
Trigger: CTGCTGCCAGACCTGCCCCCAGGAGCGCAGCAGTTC...GTGGCACGAGCCCGAGTCTCGCTGCTGCGCTCTAGCCTCCGCTTCTCTATCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR CCA 90 bp GTGGCCGTCACCACGGGCCCGCTCCTCAGCGCCTGGCTCCCCGCGGTCGCTATAACAGGACACTGCCATTaGAGTCTGAGAAGCGGATCC +
Preference number: 4 (lower is better)
Translates to: VAVTTGPLLSAWLPAVAITGHCH*SLRSGS
Trigger: GGATCCGCTTCTCAGACTCCAATGGCAGTGTCCTGT...TATAGCGACCGCGGGGAGCCAGGCGCTGAGGAGCGGGCCCGTGGTGACGGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR CCA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTCCAGGCCATCTTGGGTaGGGGCTGCAGGGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGPGHLG*GLQGAQ
Trigger: TTGAGCACCCTGCAGCCCCCACCCAAGATGGCCTGG...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGCAGACCAGGCCATCTTaGGTGGGGGCTGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVQTRPS*VGAAGC
Trigger: GCACCCTGCAGCCCCCACCCAAGATGGCCTGGTCTG...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GCCGCTCGGCTGCCGCTCCGAACTGCTGCGCTCCTGGGGGCAGGTCTGGCAGCACCTGGGCTGAGACATTaGCCTGAAGTTCTCGCAGTA +
Preference number: 4 (lower is better)
Translates to: AARLPLRTAALLGAGLAAPGLRH*PEVLAV
Trigger: TACTGCGAGAACTTCAGGCCAATGTCTCAGCCCAGG...TGCTGCCAGACCTGCCCCCAGGAGCGCAGCAGTTCGGAGCGGCAGCCGAGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR CCA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGCAGCCGCCGAGGCCCTaGCGTTCCAGGAGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: LGFPQENARRSSMPPLPQQPPRP*RSRRPK
Trigger: CTTGGGCCTCCTGGAACGCCAGGGCCTCGGCGGCTG...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTCGAAGAAGCATGTGTTaGGGTCTCGGGGCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGRRSMC*GLGAAQ
Trigger: CTGGGCGGCCCCGAGACCCCAACACATGCTTCTTCG...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp CTGGGGCTGGCCGCCGGTGGGCCGTGCAGCGGGAACAGCATCGACTCTCCTTCCATCACCGTTCGTCTCTaGCAGGTGCAGAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: LGLAAGGPCSGNSIDSPSITVRL*QVQSEQ
Trigger: CTGCTCACTCTGCACCTGCCAGAGACGAACGGTGAT...GGAAGGAGAGTCGATGCTGTTCCCGCTGCACGGCCCACCGGCGGCCAGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp TCAGGGGCAGCAGGAGTGGAGTGTCGGGGGCCCTTGGTGCTGAGTGAAGATAAACCGGGTGTGGGCAGCTaGGCGGTGGGCACACCACCG +
Preference number: 4 (lower is better)
Translates to: SGAAGVECRGPLVLSEDKPGVGS*AVGTPP
Trigger: CGGTGGTGTGCCCACCGCCCAGCTGCCCACACCCGG...TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTATAGCAGCCCTCTCCTaGGTCCCGGCTCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGIAALS*VPAPWQ
Trigger: CTGCCAAGGAGCCGGGACCCAGGAGAGGGCTGCTAT...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGTCTGGTCTCTGGGGCTaGCCGCCGGTGGGCCGTGCA +
Preference number: 4 (lower is better)
Translates to: LGFPQENARRSSMPPLPQSGLWG*PPVGRA
Trigger: TGCACGGCCCACCGGCGGCCAGCCCCAGAGACCAGA...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp GCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCTCTGGGGGCCGCCGGTaGGCCGTGCAGCGGGAACAG +
Preference number: 4 (lower is better)
Translates to: AKALGFPQENARRSSMPPSGGRR*AVQREQ
Trigger: CTGTTCCCGCTGCACGGCCCACCGGCGGCCCCCAGA...GGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450923.5
CDS-3UTR TCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGGGGCCCGGTGCCGGATaGGAGGCCCCCAGACCTCCC +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMGPGAG*EAPRPP
Trigger: GGGAGGTCTGGGGGCCTCTCATCCGGCACCGGGCCC...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp AGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCAGCGTGAGGCTGGCTaGGCCGGCAGCACCCGTCTG +
Preference number: 4 (lower is better)
Translates to: RHWASHRRMQEGPRCHPFQREAG*AGSTRL
Trigger: CAGACGGGTGCTGCCGGCTCAGCCAGCCTCACGCTG...GAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGACATTTCCTAGCAGCGTaGGGCTGGCTGAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGHFLAA*GWLSRQ
Trigger: CTGCCGGCTCAGCCAGCCTCACGCTGCTAGGAAATG...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTCTGGCAGGTGCAGAGTaGGCAGAGCGGGTCGTAGTT +
Preference number: 4 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGLAGAE*AERVVV
Trigger: AACTACGACCCGCTCTGCTCACTCTGCACCTGCCAG...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp ACCAGGGCTCCTGCTAGGGGCACGGGCAGCGTGTCATGGCGGGCGCTATGCCCAGCCCTGGCAAGTCTCTaGCATCTTGTTTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: TRAPARGTGSVSWRALCPALASL*HLVSQG
Trigger: GCCCTGAGAAACAAGATGTCAGAGACTTGCCAGGGC...TGGGCATAGCGCCCGCCATGACACGCTGCCCGTGCCCCTAGCAGGAGCCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR TCA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGAGACTTGGAGTGGCTGTaGCCTCGGTCTGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGDLEWL*PRSGPA
Trigger: AGCTGGGCCAGACCGAGGTCACAGCCACTCCAAGTC...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCGCCGAAGGTGCAGCCTaGCGCTCCCCGAACGGGCAG +
Preference number: 4 (lower is better)
Translates to: RHWASHRRMQEGPRCHPFAEGAA*RSPNGQ
Trigger: CTGCCCGTTCGGGGAGCGGCAGGCTGCACCTTCGGC...GAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGCCTTCCCGCCGAAGGTaGAGCCTGCCGCTCCCCGAA +
Preference number: 4 (lower is better)
Translates to: LGFPQENARRSSMPPLPQPSRRR*SLPLPE
Trigger: TTCGGGGAGCGGCAGGCTGCACCTTCGGCGGGAAGG...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp GCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCGCTCGTGCCACCGCCTaGGACCTCGGCCCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: AKALGFPQENARRSSMPPARATA*DLGPVS
Trigger: GCTGACAGGGCCGAGGTCGCAGGCGGTGGCACGAGC...GGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTGTGGGGGCTGCAGGGTaGTCAAACAGGACACTGCCA +
Preference number: 4 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGVGAAG*SNRTLP
Trigger: TGGCAGTGTCCTGTTTGAGCACCCTGCAGCCCCCAC...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGAAGACAACCGAGGCACTaGCCGCCACACCCCACAGAC +
Preference number: 4 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGRQPRH*PPHPTD
Trigger: GTCTGTGGGGTGTGGCGGGCAGTGCCTCGGTTGTCT...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp TCGAAGGACAGGCCGCTCGGCTGCCGCTCCGAACTGCTGCGCTCCTGGGGGCAGGTCACAAGTGCCACATaGAGCTGTTCTGCCCTAAGG +
Preference number: 4 (lower is better)
Translates to: SKDRPLGCRSELLRSWGQVTSAT*SCSALR
Trigger: CCTTAGGGCAGAACAGCTGCATGTGGCACTTGTGAC...CTGCCCCCAGGAGCGCAGCAGTTCGGAGCGGCAGCCGAGCGGCCTGTCCTTCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR GCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCGCAGCCAGGGCCCGGTaGCGGATGAGAGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATAARAR*RMRGPQ
Trigger: CTGGGGGCCTCTCATCCGGCACCGGGCCCTGGCTGC...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp GCACCCGTCTGGACTGGGATCAGGGCATCAGCCCCACAAAGGACACTTTGCAGGGGCACTGAAGGTCTCTaGAGCCAGGGCCCGGTGCCG +
Preference number: 4 (lower is better)
Translates to: APVWTGIRASAPQRTLCRGTEGL*SQGPVP
Trigger: CGGCACCGGGCCCTGGCTGCAGAGACCTTCAGTGCC...CCTGCAAAGTGTCCTTTGTGGGGCTGATGCCCTGATCCCAGTCCAGACGGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTTGTGGCACAGGACAGTaGGCTGATCCCTCCGCTGAG +
Preference number: 4 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGCGTGQ*ADPSAE
Trigger: CTCAGCGGAGGGATCAGCGCACTGTCCTGTGCCACA...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000204604.5
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGGGCAGGGCAGCCACGTaGCCCCGAAGCTCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: LGFPQENARRSSMPPLPQGRAAT*PRSSPS
Trigger: AGACGGAGAGCTTCGGGGGCACGTGGCTGCCCTGCC...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp CCCCCGAAGCTCTCCGTCTGGGAAGTCCTTGGTGCCCACGTTCAGGAAGAGCTCCCAGGCGTGCCCTGCTaGTTGGCTCTTCACAGGGGG +
Preference number: 4 (lower is better)
Translates to: PPKLSVWEVLGAHVQEELPGVPC*LALHRG
Trigger: CCCCCTGTGAAGAGCCAAGCAGCAGGGCACGCCTGG...GAGCTCTTCCTGAACGTGGGCACCAAGGACTTCCCAGACGGAGAGCTTCGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp AAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTCCACCGCGTACCCGCTaGCCGCCAGCTCCGGTCACC +
Preference number: 4 (lower is better)
Translates to: KGTGLPTGECKKVLDATPPPRTR*PPAPVT
Trigger: GGTGACCGGAGCTGGCGGGCAGCGGGTACGCGGTGG...AGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp GTCCTTGGTGCCCACGTTCAGGAAGAGCTCATTCTGCAGCAGCATATGAGCCCCCCACCGCGTACCCGCTaGCCGCCAGCTCCGGTCACC +
Preference number: 4 (lower is better)
Translates to: VLGAHVQEELILQQHMSPPPRTR*PPAPVT
Trigger: GGTGACCGGAGCTGGCGGGCAGCGGGTACGCGGTGG...GGGGCTCATATGCTGCTGCAGAATGAGCTCTTCCTGAACGTGGGCACCAAGGAC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTCTCTCTGGGAACCACTaGCCAGCAAAACGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGLSGNH*PAKRQP
Trigger: GGGCTGCCGTTTTGCTGGGCAGTGGTTCCCAGAGAG...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp TCAGGGGCAGCAGGAGTGGAGTGTCGGGGGCCCTTGGTGCTGAGTGAAGATAAACCCTGCCAGGGCCCCTaGTACGGCGACCCCACTGAG +
Preference number: 4 (lower is better)
Translates to: SGAAGVECRGPLVLSEDKPCQGP*YGDPTE
Trigger: CTCAGTGGGGTCGCCGTACCAGGGGCCCTGGCAGGG...TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCAGTGTCCCGGCAGCTaGCGCGGCTGCCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: KALGFPQENARRSSMPPLQCPGS*RGCPQA
Trigger: GGCCTGTGGGCAGCCGCGCCAGCTGCCGGGACACTG...AAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp TCAGGGGCAGCAGGAGTGGAGTGTCGGGGGCCCTTGGTGCTGAGTGAAGATAAAGCCACGAAGTCCGTGTaGCCGTCACCACGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: SGAAGVECRGPLVLSEDKATKSV*PSPRAR
Trigger: GCGGGCCCGTGGTGACGGCCACACGGACTTCGTGGC...TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCGCCACGAAGTCCGTGTaGCCGTCACCACGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: AKALGFPQENARRSSMPPATKSV*PSPRAR
Trigger: GCGGGCCCGTGGTGACGGCCACACGGACTTCGTGGC...GGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGCCAGGCCATCTTGGGTaGGGGCTGCAGGGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVPGHLG*GLQGAQ
Trigger: TTGAGCACCCTGCAGCCCCCACCCAAGATGGCCTGG...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GGGCACACCACCGGGTCACAGATCACCGTTCGTCTCTGGCAGGTGCAGAGTGAGCAGACCAGGCCATCTTaGGTGGGGGCTGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: GHTTGSQITVRLWQVQSEQTRPS*VGAAGC
Trigger: GCACCCTGCAGCCCCCACCCAAGATGGCCTGGTCTG...CTCACTCTGCACCTGCCAGAGACGAACGGTGATCTGTGACCCGGTGGTGTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGAAGCACCCGTCTGGACTaGGATCAGGGCATCAGCCCC +
Preference number: 4 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGSTRLD*DQGISP
Trigger: GGGGCTGATGCCCTGATCCCAGTCCAGACGGGTGCT...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp CAGCGTGTCATGGCGGGCGCTATGCCCACAGTAGGGCAGGGCAGCCACGTGCCCTGGTCTCCAGTGTCATaGCCACCACCTCACTGCTTG +
Preference number: 4 (lower is better)
Translates to: QRVMAGAMPTVGQGSHVPWSPVS*PPPHCL
Trigger: CAAGCAGTGAGGTGGTGGCCATGACACTGGAGACCA...GGGCACGTGGCTGCCCTGCCCTACTGTGGGCATAGCGCCCGCCATGACACGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp GCCAGGGCCCCTGGTACGGCGACCCCACTGAGGAAGCTGCGTGACCCTAGACAACCCTCCGCTGAGGCTTaGTCTCCAGTGTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: ARAPGTATPLRKLRDPRQPSAEA*SPVSWP
Trigger: TGGCCATGACACTGGAGACCAAGCCTCAGCGGAGGG...TTGTCTAGGGTCACGCAGCTTCCTCAGTGGGGTCGCCGTACCAGGGGCCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR CCA 90 bp AGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCAGCCGCCGAGGCCCTaGCGTTCCAGGAGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: RHWASHRRMQEGPRCHPFQPPRP*RSRRPK
Trigger: CTTGGGCCTCCTGGAACGCCAGGGCCTCGGCGGCTG...GAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GAGGCCATGCCTTTTGCCAGGTGCCGCAGCAGTTCCGGCTCCAGGTCCTTCACCCGAAGAAGCATGTGTTaGGGTCTCGGGGCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: EAMPFARCRSSSGSRSFTRRSMC*GLGAAQ
Trigger: CTGGGCGGCCCCGAGACCCCAACACATGCTTCTTCG...GGTGAAGGACCTGGAGCCGGAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGTGGGCAGCTGGGCGGTaGGCACACCACCGGGTCACA +
Preference number: 4 (lower is better)
Translates to: LGFPQENARRSSMPPLPQWAAGR*AHHRVT
Trigger: TGTGACCCGGTGGTGTGCCCACCGCCCAGCTGCCCA...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTCCGGGTGTGGGCAGCTaGGCGGTGGGCACACCACCG +
Preference number: 4 (lower is better)
Translates to: KGTGLPTGECKKVLDATPPGVGS*AVGTPP
Trigger: CGGTGGTGTGCCCACCGCCCAGCTGCCCACACCCGG...AGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp TTGGCCCTCTGGCTGCTCCCTAAGAGCCTTCGGCTTCTTTCTCCAGCTCTGGATCCGGGTGTGGGCAGCTaGGCGGTGGGCACACCACCG +
Preference number: 4 (lower is better)
Translates to: LALWLLPKSLRLLSPALDPGVGS*AVGTPP
Trigger: CGGTGGTGTGCCCACCGCCCAGCTGCCCACACCCGG...ATCCAGAGCTGGAGAAAGAAGCCGAAGGCTCTTAGGGAGCAGCCAGAGGGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp ACCCGTCTGGACTGGGATCAGGGCATCAGCCCCACAAAGGACACTTTGCAGGACAGCCTGCACCGGGTGTaGGCAGCTGGGCGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: TRLDWDQGISPTKDTLQDSLHRV*AAGRWA
Trigger: TGCCCACCGCCCAGCTGCCCACACCCGGTGCAGGCT...GTCCTGCAAAGTGTCCTTTGTGGGGCTGATGCCCTGATCCCAGTCCAGACGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp ACCAGGGCTCCTGCTAGGGGCACGGGCAGCGTGTCATGGCGGGCGCTATGCCCAGCTCCTTGGCAGCCCTaGCAAGTCTCTGACATCTTG +
Preference number: 4 (lower is better)
Translates to: TRAPARGTGSVSWRALCPAPWQP*QVSDIL
Trigger: CAAGATGTCAGAGACTTGCCAGGGCTGCCAAGGAGC...TGGGCATAGCGCCCGCCATGACACGCTGCCCGTGCCCCTAGCAGGAGCCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp AGCCATAGAATCCCTTCAGCAGCCGCCGAGGCCCTGGCGTTCCAGGAGGCCCAATGGGTCCCGGCTCCTTaGCAGCCCTGGCAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: SHRIPSAAAEALAFQEAQWVPAP*QPWQVS
Trigger: AGAGACTTGCCAGGGCTGCCAAGGAGCCGGGACCCA...TTGGGCCTCCTGGAACGCCAGGGCCTCGGCGGCTGCTGAAGGGATTCTATGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGAGGCCCCCGACCCCACTaGACACTGTTTGCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGGPRPH*TLFAAV
Trigger: GACTGCTGCAAACAGTGTCCAGTGGGGTCGGGGGCC...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GGGGTGCCACCGCGTACCCGCTGCCCGCCAGCTCCGGTCACCATCAAAATAGCATGCCTCTCCCCCTTGTaGAGCTGTGGTTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: GVPPRTRCPPAPVTIKIACLSPL*SCGSQR
Trigger: CCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCA...TGCTATTTTGATGGTGACCGGAGCTGGCGGGCAGCGGGTACGCGGTGGCACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGCAGGGGCAGCAGGAGTaGAGTGTCGGGGGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: LGFPQENARRSSMPPLPQQGQQE*SVGGPW
Trigger: CCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTG...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp AAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCGGGAGGCTCGGCATaGCGCGAACGGGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: KALGFPQENARRSSMPPLPGGSA*RERDSW
Trigger: CCAGCTGTCCCGTTCGCGTCATGCCGAGCCTCCCGG...AAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000204604.5
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp AGCCGCAGAGACAACCGAGGCACTGCCCGCCACACCCCACAGACCAGGCCATCTACCTCCCCTGAAGGGTaGGTGAGTGTCACAAGTGCC +
Preference number: 4 (lower is better)
Translates to: SRRDNRGTARHTPQTRPSTSPEG*VSVTSA
Trigger: GGCACTTGTGACACTCACTCACCCTTCAGGGGAGGT...AGATGGCCTGGTCTGTGGGGTGTGGCGGGCAGTGCCTCGGTTGTCTCTGCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR TCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGAGTCAGGATGGCACTaGAGGTCTCTGCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVESGWH*RSLQPG
Trigger: CCCTGGCTGCAGAGACCTTCAGTGCCATCCTGACTC...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp GAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCAGCGTGAGGCTGGCTaGGCCGGCAGCACCCGTCTG +
Preference number: 4 (lower is better)
Translates to: EQRHWASHRRMQEGPRCHQREAG*AGSTRL
Trigger: CAGACGGGTGCTGCCGGCTCAGCCAGCCTCACGCTG...GTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGAGGCTACCCTTGGTGGTaGTCATCAGGGAGGCCATGC +
Preference number: 4 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGGYPWW*SSGRPC
Trigger: GCATGGCCTCCCTGATGATCACCACCAAGGGTAGCC...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGAGCAGTCGGTGGGGTTaGCACGCACAGGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LGFPQENARRSSMPPLPQSSRWG*HAQAGH
Trigger: GTGCCCAGCCTGTGCGTGTCAACCCCACCGACTGCT...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCGCCGAAGGTGCAGCCTaGCGCTCCCCGAACGGGCAG +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATAEGAA*RSPNGQ
Trigger: CTGCCCGTTCGGGGAGCGGCAGGCTGCACCTTCGGC...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp GAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACGCCGAAGGTGCAGCCTaGCGCTCCCCGAACGGGCAG +
Preference number: 4 (lower is better)
Translates to: EQRHWASHRRMQEGPRCHAEGAA*RSPNGQ
Trigger: CTGCCCGTTCGGGGAGCGGCAGGCTGCACCTTCGGC...GTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp ATTGGTTGGCTATGTGCACCTGCCCTCGGAGCTCCCCTCTGGGGCTACCCTTGGTCCCCTAGGTCCGGGTaGCACGTCTCGTCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: IGWLCAPALGAPLWGYPWSPRSG*HVSSKA
Trigger: TGCCTTGGACGAGACGTGGCACCCGGACCTAGGGGA...CCAAGGGTAGCCCCAGAGGGGAGCTCCGAGGGCAGGTGCACATAGCCAACCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp AAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTGCTCGTGCCACCGCCTaGGACCTCGGCCCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: KGTGLPTGECKKVLDATPARATA*DLGPVS
Trigger: GCTGACAGGGCCGAGGTCGCAGGCGGTGGCACGAGC...AGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp GAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACGCTCGTGCCACCGCCTaGGACCTCGGCCCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: EQRHWASHRRMQEGPRCHARATA*DLGPVS
Trigger: GCTGACAGGGCCGAGGTCGCAGGCGGTGGCACGAGC...GTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCGGCACTGAAGGTCTCTaGAGCCAGGGCCCGGTGCCG +
Preference number: 4 (lower is better)
Translates to: RHWASHRRMQEGPRCHPFGTEGL*SQGPVP
Trigger: CGGCACCGGGCCCTGGCTGCAGAGACCTTCAGTGCC...GAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCAGCCCTGGCCTGCCTaGCCACTCCAGGGCCATCTG +
Preference number: 4 (lower is better)
Translates to: RHWASHRRMQEGPRCHPFQPWPA*PLQGHL
Trigger: CAGATGGCCCTGGAGTGGGCAGGCAGGCCAGGGCTG...GAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp GATACTCGAAGGACAGGCCGCTCGGCTGCCGCTCCGAACTGCTGCGCTCCTGGGCTGGGAAGTCCTTGGTaGCCACGTTCAGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: DTRRTGRSAAAPNCCAPGLGSPW*PRSGRA
Trigger: AGCTCTTCCTGAACGTGGGCACCAAGGACTTCCCAG...CCCAGGAGCGCAGCAGTTCGGAGCGGCAGCCGAGCGGCCTGTCCTTCGAGTATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR GCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGAAGCCAGGCGTGCCCTaGTGCTTGGCTCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVKPGVP*CLALHR
Trigger: CCTGTGAAGAGCCAAGCAGCAGGGCACGCCTGGCTT...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp CTGGCGCGGCTGCCCACAGGCCGGGGTTGGGCACTCTGGTTTGATGTTCTTGCAAAGCCAGGCGTGCCCTaGTGCTTGGCTCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: LARLPTGRGWALWFDVLAKPGVP*CLALHR
Trigger: CCTGTGAAGAGCCAAGCAGCAGGGCACGCCTGGCTT...TGCAAGAACATCAAACCAGAGTGCCCAACCCCGGCCTGTGGGCAGCCGCGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR GCA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAAGGAAAGCCAGGCGTaGCCTGCTGCTTGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGKESQA*PAAWLF
Trigger: GAAGAGCCAAGCAGCAGGGCACGCCTGGCTTTCCTT...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGATGCCTTTTGCCAGGTaGCGCAGCAGTTCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVMPFAR*RSSSGS
Trigger: GGAGCCGGAACTGCTGCGGCACCTGGCAAAAGGCAT...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGAGGCCATGCCTTTTaGCAGGTGCCGCAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVGGHAF*QVPQQF
Trigger: GAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTCC...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGTTGGCTATGTGCACCTaGCCTCGGAGCTCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVLAMCT*PRSSPL
Trigger: CAGAGGGGAGCTCCGAGGGCAGGTGCACATAGCCAA...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp GCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCACTGGTCGGGAGCCTaGACCGGGTGTGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: AKALGFPQENARRSSMPPHWSGA*TGCGQL
Trigger: CAGCTGCCCACACCCGGTGCAGGCTCCCGACCAGTG...GGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGCTCTCTGGGAACCACTaGCCAGCAAAACGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVLSGNH*PAKRQP
Trigger: GGGCTGCCGTTTTGCTGGGCAGTGGTTCCCAGAGAG...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTGCCGCCGGTGGGCCGTaGAGCGGGAACAGCATCGAC +
Preference number: 4 (lower is better)
Translates to: KALGFPQENARRSSMPPLAAGGP*SGNSID
Trigger: GTCGATGCTGTTCCCGCTGCACGGCCCACCGGCGGC...AAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp ACAAGTGCCACATGCAGCTGTTCTGCCCTAAGGAGCCGCAGAGACAACCGAGGCTCCTGGGGGCAGGTCTaGCAGCAGTGTCCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: TSATCSCSALRSRRDNRGSWGQV*QQCPGS
Trigger: GCTGCCGGGACACTGCTGCCAGACCTGCCCCCAGGA...GCCTCGGTTGTCTCTGCGGCTCCTTAGGGCAGAACAGCTGCATGTGGCACTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR CCA 90 bp ACCCGTCTGGACTGGGATCAGGGCATCAGCCCCACAAAGGACACTTTGCAGGACTCCTGGGGGCAGGTCTaGCAGCAGTGTCCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: TRLDWDQGISPTKDTLQDSWGQV*QQCPGS
Trigger: GCTGCCGGGACACTGCTGCCAGACCTGCCCCCAGGA...GTCCTGCAAAGTGTCCTTTGTGGGGCTGATGCCCTGATCCCAGTCCAGACGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp AGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCGCTCCTCAGCGCCTaGCTCCCCGCGGTCGCTATA +
Preference number: 4 (lower is better)
Translates to: RHWASHRRMQEGPRCHPFPLLSA*LPAVAI
Trigger: TATAGCGACCGCGGGGAGCCAGGCGCTGAGGAGCGG...GAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGCAGACCAGGCCATCTTaGGTGGGGGCTGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: LGFPQENARRSSMPPLPQQTRPS*VGAAGC
Trigger: GCACCCTGCAGCCCCCACCCAAGATGGCCTGGTCTG...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGATTAGTCCCCCACTCCTaGGTTCCAGCAGCCCTCGGA +
Preference number: 4 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGLVPHS*VPAALG
Trigger: TCCGAGGGCTGCTGGAACCCAGGAGTGGGGGACTAA...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000450923.5
CDS-3UTR CCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGTTAGTCCCCCACTCCTaGGTTCCAGCAGCCCTCGGA +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVLVPHS*VPAALG
Trigger: TCCGAGGGCTGCTGGAACCCAGGAGTGGGGGACTAA...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000450923.5
CDS-3UTR CCA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGCCTCAAGGGAACCTaGGTTAGTCCCCCACTCCTG +
Preference number: 4 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGSLKGT*VSPPLL
Trigger: CAGGAGTGGGGGACTAACCCAGGTTCCCTTGAGGCT...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000450923.5
CDS-3UTR CCA 90 bp GCACCCGTCTGGACTGGGATCAGGGCATCAGCCCCACAAAGGACACTTTGCAGGACTGATGCGCAGCCCTaGCCTGCCTGCCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: APVWTGIRASAPQRTLCRTDAQP*PACPLQ
Trigger: CTGGAGTGGGCAGGCAGGCCAGGGCTGCGCATCAGT...CCTGCAAAGTGTCCTTTGTGGGGCTGATGCCCTGATCCCAGTCCAGACGGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp ATGTGCACCTGCCCTCGGAGCTCCCCTCTGGGGCTACCCTTGGTGGTGATCATCCCGGCAGCACCCGTCTaGACTGGGATCAGGGCATCA +
Preference number: 4 (lower is better)
Translates to: MCTCPRSSPLGLPLVVIIPAAPV*TGIRAS
Trigger: TGATGCCCTGATCCCAGTCCAGACGGGTGCTGCCGG...GATGATCACCACCAAGGGTAGCCCCAGAGGGGAGCTCCGAGGGCAGGTGCACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp GGTGGTGATCATCAGGGAGGCCATGCCTTTTGCCAGGTGCCGCAGCAGTTCCGGCCGGCAGCACCCGTCTaGACTGGGATCAGGGCATCA +
Preference number: 4 (lower is better)
Translates to: GGDHQGGHAFCQVPQQFRPAAPV*TGIRAS
Trigger: TGATGCCCTGATCCCAGTCCAGACGGGTGCTGCCGG...CCGGAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTCCCTGATGATCACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGCCCTCCGCTGAGGCTTaGTCTCCAGTGTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVPSAEA*SPVSWP
Trigger: TGGCCATGACACTGGAGACCAAGCCTCAGCGGAGGG...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000204604.5
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GGGCACACCACCGGGTCACAGATCACCGTTCGTCTCTGGCAGGTGCAGAGTGAGGCGTGCCCTGCTGCTTaGCTCTTCACAGGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: GHTTGSQITVRLWQVQSEACPAA*LFTGGS
Trigger: GCTACCCCCTGTGAAGAGCCAAGCAGCAGGGCACGC...CTCACTCTGCACCTGCCAGAGACGAACGGTGATCTGTGACCCGGTGGTGTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp AAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCAGCCGCCGAGGCCCTaGCGTTCCAGGAGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: KALGFPQENARRSSMPPLQPPRP*RSRRPK
Trigger: CTTGGGCCTCCTGGAACGCCAGGGCCTCGGCGGCTG...AAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp ACCAGGGCTCCTGCTAGGGGCACGGGCAGCGTGTCATGGCGGGCGCTATGCCCACAACCTCACATTGGTTaGCTATGTGCACCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: TRAPARGTGSVSWRALCPQPHIG*LCAPAL
Trigger: GAGGGCAGGTGCACATAGCCAACCAATGTGAGGTTG...TGGGCATAGCGCCCGCCATGACACGCTGCCCGTGCCCCTAGCAGGAGCCCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp GCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCAGGACCACCAGGTTTaGCGGGCGCTAGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: AKALGFPQENARRSSMPPQDHQV*RALGPG
Trigger: TCCCGGCCCTAGCGCCCGCCAAACCTGGTGGTCCTG...GGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCAGAGCGGGTCGTAGTTaGGCGCCCAGCGAGCCCCGT +
Preference number: 4 (lower is better)
Translates to: RHWASHRRMQEGPRCHPFRAGRS*APSEPR
Trigger: ACGGGGCTCGCTGGGCGCCCAACTACGACCCGCTCT...GAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GCAGGGTGCTCAAACAGGACACTGCCATTGGAGTCTGAGAAGCGGATCCTGGTACCGGGTGTGGGCAGCTaGGCGGTGGGCACACCACCG +
Preference number: 4 (lower is better)
Translates to: AGCSNRTLPLESEKRILVPGVGS*AVGTPP
Trigger: CGGTGGTGTGCCCACCGCCCAGCTGCCCACACCCGG...TACCAGGATCCGCTTCTCAGACTCCAATGGCAGTGTCCTGTTTGAGCACCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR CCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCAGCCTGCACCGGGTGTaGGCAGCTGGGCGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATSLHRV*AAGRWA
Trigger: TGCCCACCGCCCAGCTGCCCACACCCGGTGCAGGCT...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTTCTGGTCTCTGGGGCTaGCCGCCGGTGGGCCGTGCA +
Preference number: 4 (lower is better)
Translates to: KALGFPQENARRSSMPPLSGLWG*PPVGRA
Trigger: TGCACGGCCCACCGGCGGCCAGCCCCAGAGACCAGA...AAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCTCTGGTCTCTGGGGCTaGCCGCCGGTGGGCCGTGCA +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATSGLWG*PPVGRA
Trigger: TGCACGGCCCACCGGCGGCCAGCCCCAGAGACCAGA...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGACAGGCCCCATCCTCTTaGTCACTTGGCCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGQAPSS*SLGPLA
Trigger: AGCCAGAGGGCCAAGTGACCAAGAGGATGGGGCCTG...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGACCCCTTGTGGAGCTGTaGTTCCCAGAGGTAGTGGGG +
Preference number: 4 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGPLVEL*FPEVVG
Trigger: CCCCACTACCTCTGGGAACCACAGCTCCACAAGGGG...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GCGGTCGCTATAACTGCGATGCTCCGGGTCCCGCGGATACTCGAAGGACAGGCCTGCCTCTCCCCCTTGTaGAGCTGTGGTTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: AVAITAMLRVPRILEGQACLSPL*SCGSQR
Trigger: CCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCA...GGCCTGTCCTTCGAGTATCCGCGGGACCCGGAGCATCGCAGTTATAGCGACCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR CCA 90 bp AGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCGCTGTGACCTCGGTCTaGCCCAGCTGCCTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: RHWASHRRMQEGPRCHPFAVTSV*PSCLSP
Trigger: GGGGGAGAGGCAGCTGGGCCAGACCGAGGTCACAGC...GAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AGCCATAGAATCCCTTCAGCAGCCGCCGAGGCCCTGGCGTTCCAGGAGGCCCAATGGCAGGGCAGGACTTaGAGTGGCTGTGACCTCGGT +
Preference number: 4 (lower is better)
Translates to: SHRIPSAAAEALAFQEAQWQGRT*SGCDLG
Trigger: ACCGAGGTCACAGCCACTCCAAGTCCTGCCCTGCCA...TTGGGCCTCCTGGAACGCCAGGGCCTCGGCGGCTGCTGAAGGGATTCTATGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp GCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCAGGGGCAGCAGGAGTaGAGTGTCGGGGGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: AKALGFPQENARRSSMPPQGQQE*SVGGPW
Trigger: CCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTG...GGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGACCTCCCCTGAAGGGTaGGTGAGTGTCACAAGTGCC +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVTSPEG*VSVTSA
Trigger: GGCACTTGTGACACTCACTCACCCTTCAGGGGAGGT...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp ATTGGTTGGCTATGTGCACCTGCCCTCGGAGCTCCCCTCTGGGGCTACCCTTGGGAGTCAGGATGGCACTaGAGGTCTCTGCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: IGWLCAPALGAPLWGYPWESGWH*RSLQPG
Trigger: CCCTGGCTGCAGAGACCTTCAGTGCCATCCTGACTC...CCAAGGGTAGCCCCAGAGGGGAGCTCCGAGGGCAGGTGCACATAGCCAACCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR TCA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGCAGCAATGTGTCCACTaGTGCGCAGCCCTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LGFPQENARRSSMPPLPQQQCVH*CAALAC
Trigger: GCAGGCCAGGGCTGCGCATCAGTGGACACATTGCTG...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp GCACCCGTCTGGACTGGGATCAGGGCATCAGCCCCACAAAGGACACTTTGCAGGCAGCAATGTGTCCACTaGTGCGCAGCCCTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: APVWTGIRASAPQRTLCRQQCVH*CAALAC
Trigger: GCAGGCCAGGGCTGCGCATCAGTGGACACATTGCTG...CCTGCAAAGTGTCCTTTGTGGGGCTGATGCCCTGATCCCAGTCCAGACGGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR TCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCAGCGTGAGGCTGGCTaGGCCGGCAGCACCCGTCTG +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMQREAG*AGSTRL
Trigger: CAGACGGGTGCTGCCGGCTCAGCCAGCCTCACGCTG...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGACACACCCTGGGCCTCTaGGCCATAGAATCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGHTLGL*AIESLQ
Trigger: CTGAAGGGATTCTATGGCTCAGAGGCCCAGGGTGTG...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGCACACCCTGGGCCTCTaGGCCATAGAATCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVHTLGL*AIESLQ
Trigger: CTGAAGGGATTCTATGGCTCAGAGGCCCAGGGTGTG...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp GGGCACACCACCGGGTCACAGATCACCGTTCGTCTCTGGCAGGTGCAGAGTGAGGGCTACCCTTGGTGGTaGTCATCAGGGAGGCCATGC +
Preference number: 4 (lower is better)
Translates to: GHTTGSQITVRLWQVQSEGYPWW*SSGRPC
Trigger: GCATGGCCTCCCTGATGATCACCACCAAGGGTAGCC...CTCACTCTGCACCTGCCAGAGACGAACGGTGATCTGTGACCCGGTGGTGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR TCA 90 bp ATGTGCACCTGCCCTCGGAGCTCCCCTCTGGGGCTACCCTTGGTGGTGATCATCCTGGCAGGTGCAGAGTaGGCAGAGCGGGTCGTAGTT +
Preference number: 4 (lower is better)
Translates to: MCTCPRSSPLGLPLVVIILAGAE*AERVVV
Trigger: AACTACGACCCGCTCTGCTCACTCTGCACCTGCCAG...GATGATCACCACCAAGGGTAGCCCCAGAGGGGAGCTCCGAGGGCAGGTGCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR TCA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGGAGGGGTGCCAGCTCTaGCTCTCTGGGAACCACTGC +
Preference number: 4 (lower is better)
Translates to: LGFPQENARRSSMPPLPQEGCQL*LSGNHC
Trigger: GCAGTGGTTCCCAGAGAGTCAGAGCTGGCACCCCTC...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGGCCGAAGGTGCAGCCTaGCGCTCCCCGAACGGGCAG +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMAEGAA*RSPNGQ
Trigger: CTGCCCGTTCGGGGAGCGGCAGGCTGCACCTTCGGC...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCGCCGAAGGTaGAGCCTGCCGCTCCCCGAA +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATPSRRR*SLPLPE
Trigger: TTCGGGGAGCGGCAGGCTGCACCTTCGGCGGGAAGG...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTCCTTCCCGCCGAAGGTaGAGCCTGCCGCTCCCCGAA +
Preference number: 4 (lower is better)
Translates to: KGTGLPTGECKKVLDATPPSRRR*SLPLPE
Trigger: TTCGGGGAGCGGCAGGCTGCACCTTCGGCGGGAAGG...AGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp CAGAGACAACCGAGGCACTGCCCGCCACACCCCACAGACCAGGCCATCTTGGGTATCTTGGGTGGGGGCTaGAGGGTGCTCAAACAGGAC +
Preference number: 4 (lower is better)
Translates to: QRQPRHCPPHPTDQAILGILGGG*RVLKQD
Trigger: GTCCTGTTTGAGCACCCTGCAGCCCCCACCCAAGAT...ACCCAAGATGGCCTGGTCTGTGGGGTGTGGCGGGCAGTGCCTCGGTTGTCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR GCA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGAATCTTGGGTGGGGGCTaGAGGGTGCTCAAACAGGAC +
Preference number: 4 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGILGGG*RVLKQD
Trigger: GTCCTGTTTGAGCACCCTGCAGCCCCCACCCAAGAT...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp CAGCGTGTCATGGCGGGCGCTATGCCCACAGTAGGGCAGGGCAGCCACGTGCCCAGTGAGTGTCACAAGTaGCACATGCAGCTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: QRVMAGAMPTVGQGSHVPSECHK*HMQLFC
Trigger: GCAGAACAGCTGCATGTGGCACTTGTGACACTCACT...GGGCACGTGGCTGCCCTGCCCTACTGTGGGCATAGCGCCCGCCATGACACGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp TTGGCCCTCTGGCTGCTCCCTAAGAGCCTTCGGCTTCTTTCTCCAGCTCTGGATGGCACTGAAGGTCTCTaGAGCCAGGGCCCGGTGCCG +
Preference number: 4 (lower is better)
Translates to: LALWLLPKSLRLLSPALDGTEGL*SQGPVP
Trigger: CGGCACCGGGCCCTGGCTGCAGAGACCTTCAGTGCC...ATCCAGAGCTGGAGAAAGAAGCCGAAGGCTCTTAGGGAGCAGCCAGAGGGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp GAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACGGCACTGAAGGTCTCTaGAGCCAGGGCCCGGTGCCG +
Preference number: 4 (lower is better)
Translates to: EQRHWASHRRMQEGPRCHGTEGL*SQGPVP
Trigger: CGGCACCGGGCCCTGGCTGCAGAGACCTTCAGTGCC...GTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCAGCCCTGGCCTGCCTaGCCACTCCAGGGCCATCTG +
Preference number: 4 (lower is better)
Translates to: KALGFPQENARRSSMPPLQPWPA*PLQGHL
Trigger: CAGATGGCCCTGGAGTGGGCAGGCAGGCCAGGGCTG...AAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTTGGCCACCACCTCACTaGTTGTCCCTACCACTTGCA +
Preference number: 4 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGWPPPH*LSLPLA
Trigger: TGCAAGTGGTAGGGACAAGCAGTGAGGTGGTGGCCA...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000204604.5
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp ATCATCAGGGAGGCCATGCCTTTTGCCAGGTGCCGCAGCAGTTCCGGCTCCAGGTGTGGCACAGGACAGTaGGCTGATCCCTCCGCTGAG +
Preference number: 4 (lower is better)
Translates to: IIREAMPFARCRSSSGSRCGTGQ*ADPSAE
Trigger: CTCAGCGGAGGGATCAGCGCACTGTCCTGTGCCACA...CCTGGAGCCGGAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTCCCTGATGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp AGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCAGGCGTGCCCTGCTaGTTGGCTCTTCACAGGGGG +
Preference number: 4 (lower is better)
Translates to: RHWASHRRMQEGPRCHPFPGVPC*LALHRG
Trigger: CCCCCTGTGAAGAGCCAAGCAGCAGGGCACGCCTGG...GAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp GTGGTGATCATCAGGGAGGCCATGCCTTTTGCCAGGTGCCGCAGCAGTTCCGGCAAGCCAGGCGTGCCCTaGTGCTTGGCTCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: VVIIREAMPFARCRSSSGKPGVP*CLALHR
Trigger: CCTGTGAAGAGCCAAGCAGCAGGGCACGCCTGGCTT...GCCGGAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTCCCTGATGATCACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGAAGGAAAGCCAGGCGTaGCCTGCTGCTTGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVKESQA*PAAWLF
Trigger: GAAGAGCCAAGCAGCAGGGCACGCCTGGCTTTCCTT...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp GGGCACACCACCGGGTCACAGATCACCGTTCGTCTCTGGCAGGTGCAGAGTGAGATGCCTTTTGCCAGGTaGCGCAGCAGTTCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: GHTTGSQITVRLWQVQSEMPFAR*RSSSGS
Trigger: GGAGCCGGAACTGCTGCGGCACCTGGCAAAAGGCAT...CTCACTCTGCACCTGCCAGAGACGAACGGTGATCTGTGACCCGGTGGTGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGTCATCAGGGAGGCCATaGCTTTTGCCAGGTGCCGCA +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVSSGRP*LLPGAA
Trigger: TGCGGCACCTGGCAAAAGGCATGGCCTCCCTGATGA...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp GGCACAGGACAGTGCGCTGATCCCTCCGCTGAGGCTTGGTCTCCAGTGTCATGGTTGGCTATGTGCACCTaGCCTCGGAGCTCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: GTGQCADPSAEAWSPVSWLAMCT*PRSSPL
Trigger: CAGAGGGGAGCTCCGAGGGCAGGTGCACATAGCCAA...CCATGACACTGGAGACCAAGCCTCAGCGGAGGGATCAGCGCACTGTCCTGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp CCCCCGAAGCTCTCCGTCTGGGAAGTCCTTGGTGCCCACGTTCAGGAAGAGCTCTTGGCTATGTGCACCTaGCCTCGGAGCTCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: PPKLSVWEVLGAHVQEELLAMCT*PRSSPL
Trigger: CAGAGGGGAGCTCCGAGGGCAGGTGCACATAGCCAA...GAGCTCTTCCTGAACGTGGGCACCAAGGACTTCCCAGACGGAGAGCTTCGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp GCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCCGTGGGGGCGCTGCTaGCCCTCGAAGAAGCATGTG +
Preference number: 4 (lower is better)
Translates to: AKALGFPQENARRSSMPPPWGRC*PSKKHV
Trigger: CACATGCTTCTTCGAGGGGCAGCAGCGCCCCCACGG...GGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCGTGGGGGCGCTGCTaGCCCTCGAAGAAGCATGTG +
Preference number: 4 (lower is better)
Translates to: RHWASHRRMQEGPRCHPFPWGRC*PSKKHV
Trigger: CACATGCTTCTTCGAGGGGCAGCAGCGCCCCCACGG...GAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGTTCGTCTCTGGCAGGTaGAGAGTGAGCAGAGCGGGT +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVFVSGR*RVSRAG
Trigger: ACCCGCTCTGCTCACTCTGCACCTGCCAGAGACGAA...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp GCGGTCGCTATAACTGCGATGCTCCGGGTCCCGCGGATACTCGAAGGACAGGCCTTCGTCTCTGGCAGGTaGAGAGTGAGCAGAGCGGGT +
Preference number: 4 (lower is better)
Translates to: AVAITAMLRVPRILEGQAFVSGR*RVSRAG
Trigger: ACCCGCTCTGCTCACTCTGCACCTGCCAGAGACGAA...GGCCTGTCCTTCGAGTATCCGCGGGACCCGGAGCATCGCAGTTATAGCGACCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR GCA 90 bp GAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCACTGGTCGGGAGCCTaGACCGGGTGTGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: EQRHWASHRRMQEGPRCHHWSGA*TGCGQL
Trigger: CAGCTGCCCACACCCGGTGCAGGCTCCCGACCAGTG...GTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp ATTGGTTGGCTATGTGCACCTGCCCTCGGAGCTCCCCTCTGGGGCTACCCTTGGCTCTCTGGGAACCACTaGCCAGCAAAACGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: IGWLCAPALGAPLWGYPWLSGNH*PAKRQP
Trigger: GGGCTGCCGTTTTGCTGGGCAGTGGTTCCCAGAGAG...CCAAGGGTAGCCCCAGAGGGGAGCTCCGAGGGCAGGTGCACATAGCCAACCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp GGCACAGGACAGTGCGCTGATCCCTCCGCTGAGGCTTGGTCTCCAGTGTCATGGCTCTCTGGGAACCACTaGCCAGCAAAACGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GTGQCADPSAEAWSPVSWLSGNH*PAKRQP
Trigger: GGGCTGCCGTTTTGCTGGGCAGTGGTTCCCAGAGAG...CCATGACACTGGAGACCAAGCCTCAGCGGAGGGATCAGCGCACTGTCCTGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGAACAGTGAGGCACCCCTaGCCCACATCTGCAGGTGAT +
Preference number: 4 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGTVRHP*PTSAGD
Trigger: ATCACCTGCAGATGTGGGGCAGGGGTGCCTCACTGT...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp ATTGGTTGGCTATGTGCACCTGCCCTCGGAGCTCCCCTCTGGGGCTACCCTTGGACTTGGCCCTCTGGCTaGTCCCTAAGAGCCTTCGGC +
Preference number: 4 (lower is better)
Translates to: IGWLCAPALGAPLWGYPWTWPSG*SLRAFG
Trigger: GCCGAAGGCTCTTAGGGAGCAGCCAGAGGGCCAAGT...CCAAGGGTAGCCCCAGAGGGGAGCTCCGAGGGCAGGTGCACATAGCCAACCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGCCCACAGGCCGGGGTTaGGCACTCTGGTTTGATGTT +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVPTGRG*ALWFDV
Trigger: AACATCAAACCAGAGTGCCCAACCCCGGCCTGTGGG...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTTCCTGGGGGCAGGTCTaGCAGCAGTGTCCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: KALGFPQENARRSSMPPLSWGQV*QQCPGS
Trigger: GCTGCCGGGACACTGCTGCCAGACCTGCCCCCAGGA...AAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp TCAGGGGCAGCAGGAGTGGAGTGTCGGGGGCCCTTGGTGCTGAGTGAAGATAAAGAACTGCTGCGCTCCTaGGGGCAGGTCTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SGAAGVECRGPLVLSEDKELLRS*GQVWQQ
Trigger: CTGCTGCCAGACCTGCCCCCAGGAGCGCAGCAGTTC...TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp ACCCGTCTGGACTGGGATCAGGGCATCAGCCCCACAAAGGACACTTTGCAGGACGAACTGCTGCGCTCCTaGGGGCAGGTCTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TRLDWDQGISPTKDTLQDELLRS*GQVWQQ
Trigger: CTGCTGCCAGACCTGCCCCCAGGAGCGCAGCAGTTC...GTCCTGCAAAGTGTCCTTTGTGGGGCTGATGCCCTGATCCCAGTCCAGACGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp AGCGCCTGGCTCCCCGCGGTCGCTATAACTGCGATGCTCCGGGTCCCGCGGATAACAGGACACTGCCATTaGAGTCTGAGAAGCGGATCC +
Preference number: 4 (lower is better)
Translates to: SAWLPAVAITAMLRVPRITGHCH*SLRSGS
Trigger: GGATCCGCTTCTCAGACTCCAATGGCAGTGTCCTGT...TATCCGCGGGACCCGGAGCATCGCAGTTATAGCGACCGCGGGGAGCCAGGCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR CCA 90 bp CTTGGGTGGGGGCTGCAGGGTGCTCAAACAGGACACTGCCATTGGAGTCTGAGAACTGATGCGCAGCCCTaGCCTGCCTGCCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: LGWGLQGAQTGHCHWSLRTDAQP*PACPLQ
Trigger: CTGGAGTGGGCAGGCAGGCCAGGGCTGCGCATCAGT...TCTCAGACTCCAATGGCAGTGTCCTGTTTGAGCACCCTGCAGCCCCCACCCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR CCA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTTGGTCTCCAGTGTCATaGCCACCACCTCACTGCTTG +
Preference number: 4 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGWSPVS*PPPHCL
Trigger: CAAGCAGTGAGGTGGTGGCCATGACACTGGAGACCA...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000204604.5
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GGGGTGCCACCGCGTACCCGCTGCCCGCCAGCTCCGGTCACCATCAAAATAGCATGGTCTCCAGTGTCATaGCCACCACCTCACTGCTTG +
Preference number: 4 (lower is better)
Translates to: GVPPRTRCPPAPVTIKIAWSPVS*PPPHCL
Trigger: CAAGCAGTGAGGTGGTGGCCATGACACTGGAGACCA...TGCTATTTTGATGGTGACCGGAGCTGGCGGGCAGCGGGTACGCGGTGGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGGGCCGTGTGTCCTCCTaGCTGGAGTCCAGCCATGTG +
Preference number: 4 (lower is better)
Translates to: LGFPQENARRSSMPPLPQGRVSS*LESSHV
Trigger: CACATGGCTGGACTCCAGCCAGGAGGACACACGGCC...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000204604.5
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTCAGGACCACCAGGTTTaGCGGGCGCTAGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: KGTGLPTGECKKVLDATPQDHQV*RALGPG
Trigger: TCCCGGCCCTAGCGCCCGCCAAACCTGGTGGTCCTG...AGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTGGGCAGCTGGGCGGTaGGCACACCACCGGGTCACA +
Preference number: 4 (lower is better)
Translates to: KGTGLPTGECKKVLDATPWAAGR*AHHRVT
Trigger: TGTGACCCGGTGGTGTGCCCACCGCCCAGCTGCCCA...AGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGAGCCTGCACCGGGTGTaGGCAGCTGGGCGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMSLHRV*AAGRWA
Trigger: TGCCCACCGCCCAGCTGCCCACACCCGGTGCAGGCT...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGTGGGTCCCGGCTCCTTaGCAGCCCTGGCAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: LGFPQENARRSSMPPLPQWVPAP*QPWQVS
Trigger: AGAGACTTGCCAGGGCTGCCAAGGAGCCGGGACCCA...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTGCCCATCAGCCTGCATaGGGTCCCCCAGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: KGTGLPTGECKKVLDATPAHQPA*GPPAGG
Trigger: ACCCCCAGCTGGGGGACCCCATGCAGGCTGATGGGC...AGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTGCCCATCAGCCTGCATaGGGTCCCCCAGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: KALGFPQENARRSSMPPLAHQPA*GPPAGG
Trigger: ACCCCCAGCTGGGGGACCCCATGCAGGCTGATGGGC...AAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GAGGCCATGCCTTTTGCCAGGTGCCGCAGCAGTTCCGGCTCCAGGTCCTTCACCGGTCACTTGGCCCTCTaGCTGCTCCCTAAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: EAMPFARCRSSSGSRSFTGHLAL*LLPKSL
Trigger: AAGGCTCTTAGGGAGCAGCCAGAGGGCCAAGTGACC...GGTGAAGGACCTGGAGCCGGAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp ATTGGTTGGCTATGTGCACCTGCCCTCGGAGCTCCCCTCTGGGGCTACCCTTGGCCCCTTGTGGAGCTGTaGTTCCCAGAGGTAGTGGGG +
Preference number: 4 (lower is better)
Translates to: IGWLCAPALGAPLWGYPWPLVEL*FPEVVG
Trigger: CCCCACTACCTCTGGGAACCACAGCTCCACAAGGGG...CCAAGGGTAGCCCCAGAGGGGAGCTCCGAGGGCAGGTGCACATAGCCAACCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCAGGGGCAGCAGGAGTaGAGTGTCGGGGGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATQGQQE*SVGGPW
Trigger: CCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTG...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
3UTR CAA 72 bp GTGGGGGCTGCAGGGTGCTCAAACAGGACACTGCCATaGGAGTCTGAGAAGCGGATCCTGGTAGGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: VGAAGCSNRTLP*ESEKRILVGRS
Trigger: GGACCGCCCTACCAGGATCCGCTTCTCAGACTCCAATGGCAGTGTCCTGTTTGAGCACCCTGCAGCCCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR TCA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGAACTGCCATTGGAGTCTaGGAAGCGGATCCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGTAIGV*EADPGR
Trigger: CCTACCAGGATCCGCTTCTCAGACTCCAATGGCAGT...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp GCGGTCGCTATAACTGCGATGCTCCGGGTCCCGCGGATACTCGAAGGACAGGCCACTGCCATTGGAGTCTaGGAAGCGGATCCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: AVAITAMLRVPRILEGQATAIGV*EADPGR
Trigger: CCTACCAGGATCCGCTTCTCAGACTCCAATGGCAGT...GGCCTGTCCTTCGAGTATCCGCGGGACCCGGAGCATCGCAGTTATAGCGACCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR TCA 90 bp CAGAGACAACCGAGGCACTGCCCGCCACACCCCACAGACCAGGCCATCTTGGGTACTGCCATTGGAGTCTaGGAAGCGGATCCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: QRQPRHCPPHPTDQAILGTAIGV*EADPGR
Trigger: CCTACCAGGATCCGCTTCTCAGACTCCAATGGCAGT...ACCCAAGATGGCCTGGTCTGTGGGGTGTGGCGGGCAGTGCCTCGGTTGTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR TCA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGACCCCTGAAGGGTGAGTaGGTGTCACAAGTGCCACAT +
Preference number: 4 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGPLKGE*VSQVPH
Trigger: ATGTGGCACTTGTGACACTCACTCACCCTTCAGGGG...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGGAGTCAGGATGGCACTaGAGGTCTCTGCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LGFPQENARRSSMPPLPQESGWH*RSLQPG
Trigger: CCCTGGCTGCAGAGACCTTCAGTGCCATCCTGACTC...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp CCACAGGCCGGGGTTGGGCACTCTGGTTTGATGTTCTTGCAGCTGACCCTGCCAGAGTCAGGATGGCACTaGAGGTCTCTGCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PQAGVGHSGLMFLQLTLPESGWH*RSLQPG
Trigger: CCCTGGCTGCAGAGACCTTCAGTGCCATCCTGACTC...TGGCAGGGTCAGCTGCAAGAACATCAAACCAGAGTGCCCAACCCCGGCCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR TCA 90 bp GCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCATTTCCTAGCAGCGTaGGGCTGGCTGAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: AKALGFPQENARRSSMPPHFLAA*GWLSRQ
Trigger: CTGCCGGCTCAGCCAGCCTCACGCTGCTAGGAAATG...GGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp GTGGTGATCATCAGGGAGGCCATGCCTTTTGCCAGGTGCCGCAGCAGTTCCGGCCACACCCTGGGCCTCTaGGCCATAGAATCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: VVIIREAMPFARCRSSSGHTLGL*AIESLQ
Trigger: CTGAAGGGATTCTATGGCTCAGAGGCCCAGGGTGTG...GCCGGAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTCCCTGATGATCACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR TCA 90 bp CACGTTCAGGAAGAGCTCATTCTGCAGCAGCATATGAGCCCCTCGGGCACCCAGGAGGGGTGCCAGCTCTaGCTCTCTGGGAACCACTGC +
Preference number: 4 (lower is better)
Translates to: HVQEELILQQHMSPSGTQEGCQL*LSGNHC
Trigger: GCAGTGGTTCCCAGAGAGTCAGAGCTGGCACCCCTC...CTGGGTGCCCGAGGGGCTCATATGCTGCTGCAGAATGAGCTCTTCCTGAACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR TCA 90 bp TCAGGGGCAGCAGGAGTGGAGTGTCGGGGGCCCTTGGTGCTGAGTGAAGATAAAGAGGGGTGCCAGCTCTaGCTCTCTGGGAACCACTGC +
Preference number: 4 (lower is better)
Translates to: SGAAGVECRGPLVLSEDKEGCQL*LSGNHC
Trigger: GCAGTGGTTCCCAGAGAGTCAGAGCTGGCACCCCTC...TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp CGCAGAGACAACCGAGGCACTGCCCGCCACACCCCACAGACCAGGCCATCTTGGCCCCACATCTGCAGGTaGTACAGCTCATCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: RRDNRGTARHTPQTRPSWPHICR*YSSSLQ
Trigger: TTGGAGAGATGAGCTGTATCACCTGCAGATGTGGGG...CCAAGATGGCCTGGTCTGTGGGGTGTGGCGGGCAGTGCCTCGGTTGTCTCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR TCA 90 bp GGAGATAGAGAAGCGGAGGCTAGAGCGCAGCAGCGAGACTCGGGCTCGTGCCACACAGGACAGTGGCAGTaGACAGTCATCCCGCTCACA +
Preference number: 4 (lower is better)
Translates to: GDREAEARAQQRDSGSCHTGQWQ*TVIPLT
Trigger: TGTGAGCGGGATGACTGTTCACTGCCACTGTCCTGT...GTGGCACGAGCCCGAGTCTCGCTGCTGCGCTCTAGCCTCCGCTTCTCTATCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR TCA 90 bp TCAGGGGCAGCAGGAGTGGAGTGTCGGGGGCCCTTGGTGCTGAGTGAAGATAAAGACTTGGAGTGGCTGTaGCCTCGGTCTGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SGAAGVECRGPLVLSEDKDLEWL*PRSGPA
Trigger: AGCTGGGCCAGACCGAGGTCACAGCCACTCCAAGTC...TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AAGGAAAGCCAGGCGTGCCCTGCTGCTTGGCTCTTCACAGGGGGTAGCACCAGGATCTTGGGTGGGGGCTaGAGGGTGCTCAAACAGGAC +
Preference number: 4 (lower is better)
Translates to: KESQACPAAWLFTGGSTRILGGG*RVLKQD
Trigger: GTCCTGTTTGAGCACCCTGCAGCCCCCACCCAAGAT...CCTGGTGCTACCCCCTGTGAAGAGCCAAGCAGCAGGGCACGCCTGGCTTTCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp GCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCAGACAACCGAGGCACTaGCCGCCACACCCCACAGAC +
Preference number: 4 (lower is better)
Translates to: AKALGFPQENARRSSMPPRQPRH*PPHPTD
Trigger: GTCTGTGGGGTGTGGCGGGCAGTGCCTCGGTTGTCT...GGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGACACATGCAGCTGTTCTaGCCTAAGGAGCCGCAGAGA +
Preference number: 4 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGHMQLF*PKEPQR
Trigger: TCTCTGCGGCTCCTTAGGGCAGAACAGCTGCATGTG...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AGCGCCTGGCTCCCCGCGGTCGCTATAACTGCGATGCTCCGGGTCCCGCGGATAAGTGAGTGTCACAAGTaGCACATGCAGCTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SAWLPAVAITAMLRVPRISECHK*HMQLFC
Trigger: GCAGAACAGCTGCATGTGGCACTTGTGACACTCACT...TATCCGCGGGACCCGGAGCATCGCAGTTATAGCGACCGCGGGGAGCCAGGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR GCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGGGCACTGAAGGTCTCTaGAGCCAGGGCCCGGTGCCG +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMGTEGL*SQGPVP
Trigger: CGGCACCGGGCCCTGGCTGCAGAGACCTTCAGTGCC...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGACTGGGAAGTCCTTGGTaGCCACGTTCAGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGLGSPW*PRSGRA
Trigger: AGCTCTTCCTGAACGTGGGCACCAAGGACTTCCCAG...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCAGGCGTGCCCTGCTaGTTGGCTCTTCACAGGGGG +
Preference number: 4 (lower is better)
Translates to: KALGFPQENARRSSMPPLPGVPC*LALHRG
Trigger: CCCCCTGTGAAGAGCCAAGCAGCAGGGCACGCCTGG...AAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGAAGCCAGGCGTGCCCTaGTGCTTGGCTCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: LGFPQENARRSSMPPLPQKPGVP*CLALHR
Trigger: CCTGTGAAGAGCCAAGCAGCAGGGCACGCCTGGCTT...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp ATTGGTTGGCTATGTGCACCTGCCCTCGGAGCTCCCCTCTGGGGCTACCCTTGGAAGGAAAGCCAGGCGTaGCCTGCTGCTTGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: IGWLCAPALGAPLWGYPWKESQA*PAAWLF
Trigger: GAAGAGCCAAGCAGCAGGGCACGCCTGGCTTTCCTT...CCAAGGGTAGCCCCAGAGGGGAGCTCCGAGGGCAGGTGCACATAGCCAACCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGATGCCTTTTGCCAGGTaGCGCAGCAGTTCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: LGFPQENARRSSMPPLPQMPFAR*RSSSGS
Trigger: GGAGCCGGAACTGCTGCGGCACCTGGCAAAAGGCAT...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCACTGGTCGGGAGCCTaGACCGGGTGTGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMHWSGA*TGCGQL
Trigger: CAGCTGCCCACACCCGGTGCAGGCTCCCGACCAGTG...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGAGTTCTCGCAGTAGCTaGCCCTGGTGTAGAATCCCC +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVSSRSS*PWCRIP
Trigger: GGGGATTCTACACCAGGGGCAGCTACTGCGAGAACT...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp CCTGTAGGAGATAGAGAAGCGGAGGCTAGAGCGCAGCAGCGAGACTCGGGCTCGCCCACAGGCCGGGGTTaGGCACTCTGGTTTGATGTT +
Preference number: 4 (lower is better)
Translates to: PVGDREAEARAQQRDSGSPTGRG*ALWFDV
Trigger: AACATCAAACCAGAGTGCCCAACCCCGGCCTGTGGG...CGAGCCCGAGTCTCGCTGCTGCGCTCTAGCCTCCGCTTCTCTATCTCCTACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR CCA 90 bp GTGCCCCCGAAGCTCTCCGTCTGGGAAGTCCTTGGTGCCCACGTTCAGGAAGAGCCCACAGGCCGGGGTTaGGCACTCTGGTTTGATGTT +
Preference number: 4 (lower is better)
Translates to: VPPKLSVWEVLGAHVQEEPTGRG*ALWFDV
Trigger: AACATCAAACCAGAGTGCCCAACCCCGGCCTGTGGG...CTCTTCCTGAACGTGGGCACCAAGGACTTCCCAGACGGAGAGCTTCGGGGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp AGTCCTTGGTGCCCACGTTCAGGAAGAGCTCATTCTGCAGCAGCATATGAGCCCCCGCTCCTCAGCGCCTaGCTCCCCGCGGTCGCTATA +
Preference number: 4 (lower is better)
Translates to: SPWCPRSGRAHSAAAYEPPLLSA*LPAVAI
Trigger: TATAGCGACCGCGGGGAGCCAGGCGCTGAGGAGCGG...GGGCTCATATGCTGCTGCAGAATGAGCTCTTCCTGAACGTGGGCACCAAGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCGCTCCTCAGCGCCTaGCTCCCCGCGGTCGCTATA +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMPLLSA*LPAVAI
Trigger: TATAGCGACCGCGGGGAGCCAGGCGCTGAGGAGCGG...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTACTGATGCGCAGCCCTaGCCTGCCTGCCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: KALGFPQENARRSSMPPLTDAQP*PACPLQ
Trigger: CTGGAGTGGGCAGGCAGGCCAGGGCTGCGCATCAGT...AAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp TCAGGGGCAGCAGGAGTGGAGTGTCGGGGGCCCTTGGTGCTGAGTGAAGATAAACCGGCAGCACCCGTCTaGACTGGGATCAGGGCATCA +
Preference number: 4 (lower is better)
Translates to: SGAAGVECRGPLVLSEDKPAAPV*TGIRAS
Trigger: TGATGCCCTGATCCCAGTCCAGACGGGTGCTGCCGG...TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCGGCCGTGTGTCCTCCTaGCTGGAGTCCAGCCATGTG +
Preference number: 4 (lower is better)
Translates to: AKALGFPQENARRSSMPPGRVSS*LESSHV
Trigger: CACATGGCTGGACTCCAGCCAGGAGGACACACGGCC...GGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204604.5
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGCGTCTGGGAAGTCCTTaGTGCCCACGTTCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVRLGSP*CPRSGR
Trigger: TCTTCCTGAACGTGGGCACCAAGGACTTCCCAGACG...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGCCGAAGCTCTCCGTCTaGGAAGTCCTTGGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: LGFPQENARRSSMPPLPQPKLSV*EVLGAH
Trigger: GTGGGCACCAAGGACTTCCCAGACGGAGAGCTTCGG...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTACGGGCAGCGTGTCATaGCGGGCGCTATGCCCACAG +
Preference number: 4 (lower is better)
Translates to: KGTGLPTGECKKVLDATPTGSVS*RALCPQ
Trigger: CTGTGGGCATAGCGCCCGCCATGACACGCTGCCCGT...AGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCACGGGCAGCGTGTCATaGCGGGCGCTATGCCCACAG +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATTGSVS*RALCPQ
Trigger: CTGTGGGCATAGCGCCCGCCATGACACGCTGCCCGT...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCGCGTGCCCTGCTGCTTaGCTCTTCACAGGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: RHWASHRRMQEGPRCHPFACPAA*LFTGGS
Trigger: GCTACCCCCTGTGAAGAGCCAAGCAGCAGGGCACGC...GAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCAGGACCACCAGGTTTaGCGGGCGCTAGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMQDHQV*RALGPG
Trigger: TCCCGGCCCTAGCGCCCGCCAAACCTGGTGGTCCTG...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp TCAGGGGCAGCAGGAGTGGAGTGTCGGGGGCCCTTGGTGCTGAGTGAAGATAAACGAAGAAGCATGTGTTaGGGTCTCGGGGCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: SGAAGVECRGPLVLSEDKRRSMC*GLGAAQ
Trigger: CTGGGCGGCCCCGAGACCCCAACACATGCTTCTTCG...TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGAGAGCGGGTCGTAGTTaGGCGCCCAGCGAGCCCCGT +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMRAGRS*APSEPR
Trigger: ACGGGGCTCGCTGGGCGCCCAACTACGACCCGCTCT...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp TCAGGGGCAGCAGGAGTGGAGTGTCGGGGGCCCTTGGTGCTGAGTGAAGATAAATGGGTCCCGGCTCCTTaGCAGCCCTGGCAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: SGAAGVECRGPLVLSEDKWVPAP*QPWQVS
Trigger: AGAGACTTGCCAGGGCTGCCAAGGAGCCGGGACCCA...TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCGGCCCCCGACCCCACTaGACACTGTTTGCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: RHWASHRRMQEGPRCHPFGPRPH*TLFAAV
Trigger: GACTGCTGCAAACAGTGTCCAGTGGGGTCGGGGGCC...GAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGCCAGCTCTGACTCTCTaGGAACCACTGCCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVPALTL*EPLPSK
Trigger: TTTGCTGGGCAGTGGTTCCCAGAGAGTCAGAGCTGG...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACATCAGTTCTGGTCTCTaGGGCTGGCCGCCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: EQRHWASHRRMQEGPRCHISSGL*GWPPVG
Trigger: GCCCACCGGCGGCCAGCCCCAGAGACCAGAACTGAT...GTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGCAGGCCCCATCCTCTTaGTCACTTGGCCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LGFPQENARRSSMPPLPQQAPSS*SLGPLA
Trigger: AGCCAGAGGGCCAAGTGACCAAGAGGATGGGGCCTG...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGAGGAGCAAAGGCACTaGGCTTCCCACAGGAGAATG +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVEEQRH*ASHRRM
Trigger: CATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTC...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GGCACAGGACAGTGCGCTGATCCCTCCGCTGAGGCTTGGTCTCCAGTGTCATGGCGCAGTAGCTGCCCCTaGTGTAGAATCCCCACTCCT +
Preference number: 4 (lower is better)
Translates to: GTGQCADPSAEAWSPVSWRSSCP*CRIPTP
Trigger: AGGAGTGGGGATTCTACACCAGGGGCAGCTACTGCG...CCATGACACTGGAGACCAAGCCTCAGCGGAGGGATCAGCGCACTGTCCTGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR TCA 90 bp GTGCCCCCGAAGCTCTCCGTCTGGGAAGTCCTTGGTGCCCACGTTCAGGAAGAGCCCCTGAAGGGTGAGTaGGTGTCACAAGTGCCACAT +
Preference number: 4 (lower is better)
Translates to: VPPKLSVWEVLGAHVQEEPLKGE*VSQVPH
Trigger: ATGTGGCACTTGTGACACTCACTCACCCTTCAGGGG...CTCTTCCTGAACGTGGGCACCAAGGACTTCCCAGACGGAGAGCTTCGGGGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR TCA 90 bp TCAGGGGCAGCAGGAGTGGAGTGTCGGGGGCCCTTGGTGCTGAGTGAAGATAAAGAGTCAGGATGGCACTaGAGGTCTCTGCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SGAAGVECRGPLVLSEDKESGWH*RSLQPG
Trigger: CCCTGGCTGCAGAGACCTTCAGTGCCATCCTGACTC...TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCAGCAATGTGTCCACTaGTGCGCAGCCCTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATQQCVH*CAALAC
Trigger: GCAGGCCAGGGCTGCGCATCAGTGGACACATTGCTG...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp AAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTCAGCAATGTGTCCACTaGTGCGCAGCCCTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: KGTGLPTGECKKVLDATPQQCVH*CAALAC
Trigger: GCAGGCCAGGGCTGCGCATCAGTGGACACATTGCTG...AGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp AAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTCATTTCCTAGCAGCGTaGGGCTGGCTGAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: KGTGLPTGECKKVLDATPHFLAA*GWLSRQ
Trigger: CTGCCGGCTCAGCCAGCCTCACGCTGCTAGGAAATG...AGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCATTTCCTAGCAGCGTaGGGCTGGCTGAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATHFLAA*GWLSRQ
Trigger: CTGCCGGCTCAGCCAGCCTCACGCTGCTAGGAAATG...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp GCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTGGCAGGTGCAGAGTaGGCAGAGCGGGTCGTAGTT +
Preference number: 4 (lower is better)
Translates to: AKALGFPQENARRSSMPPLAGAE*AERVVV
Trigger: AACTACGACCCGCTCTGCTCACTCTGCACCTGCCAG...GGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGAGCAGTCGGTGGGGTTaGCACGCACAGGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMSSRWG*HAQAGH
Trigger: GTGCCCAGCCTGTGCGTGTCAACCCCACCGACTGCT...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp AAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTGAGGGGTGCCAGCTCTaGCTCTCTGGGAACCACTGC +
Preference number: 4 (lower is better)
Translates to: KALGFPQENARRSSMPPLEGCQL*LSGNHC
Trigger: GCAGTGGTTCCCAGAGAGTCAGAGCTGGCACCCCTC...AAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGCCCCACATCTGCAGGTaGTACAGCTCATCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVPHICR*YSSSLQ
Trigger: TTGGAGAGATGAGCTGTATCACCTGCAGATGTGGGG...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp AGCCATAGAATCCCTTCAGCAGCCGCCGAGGCCCTGGCGTTCCAGGAGGCCCAACCCCACATCTGCAGGTaGTACAGCTCATCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: SHRIPSAAAEALAFQEAQPHICR*YSSSLQ
Trigger: TTGGAGAGATGAGCTGTATCACCTGCAGATGTGGGG...TTGGGCCTCCTGGAACGCCAGGGCCTCGGCGGCTGCTGAAGGGATTCTATGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR TCA 90 bp AAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTGACTTGGAGTGGCTGTaGCCTCGGTCTGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: KGTGLPTGECKKVLDATPDLEWL*PRSGPA
Trigger: AGCTGGGCCAGACCGAGGTCACAGCCACTCCAAGTC...AGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp GAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACTCCCCTAGGTCCGGGTaGCACGTCTCGTCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: EQRHWASHRRMQEGPRCHSPRSG*HVSSKA
Trigger: TGCCTTGGACGAGACGTGGCACCCGGACCTAGGGGA...GTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCTAGGTCCGGGTaGCACGTCTCGTCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: KGTGLPTGECKKVLDATPSPRSG*HVSSKA
Trigger: TGCCTTGGACGAGACGTGGCACCCGGACCTAGGGGA...AGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCGTGGGGGCTGCAGGGTaGTCAAACAGGACACTGCCA +
Preference number: 4 (lower is better)
Translates to: RHWASHRRMQEGPRCHPFVGAAG*SNRTLP
Trigger: TGGCAGTGTCCTGTTTGAGCACCCTGCAGCCCCCAC...GAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTAGACAACCGAGGCACTaGCCGCCACACCCCACAGAC +
Preference number: 4 (lower is better)
Translates to: KALGFPQENARRSSMPPLRQPRH*PPHPTD
Trigger: GTCTGTGGGGTGTGGCGGGCAGTGCCTCGGTTGTCT...AAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp GAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACAGACAACCGAGGCACTaGCCGCCACACCCCACAGAC +
Preference number: 4 (lower is better)
Translates to: EQRHWASHRRMQEGPRCHRQPRH*PPHPTD
Trigger: GTCTGTGGGGTGTGGCGGGCAGTGCCTCGGTTGTCT...GTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp GCGCTGATCCCTCCGCTGAGGCTTGGTCTCCAGTGTCATGGCCACCACCTCACTCACATGCAGCTGTTCTaGCCTAAGGAGCCGCAGAGA +
Preference number: 4 (lower is better)
Translates to: ALIPPLRLGLQCHGHHLTHMQLF*PKEPQR
Trigger: TCTCTGCGGCTCCTTAGGGCAGAACAGCTGCATGTG...AGTGAGGTGGTGGCCATGACACTGGAGACCAAGCCTCAGCGGAGGGATCAGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGTCACAAGTGCCACATaGAGCTGTTCTGCCCTAAGG +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVVTSAT*SCSALR
Trigger: CCTTAGGGCAGAACAGCTGCATGTGGCACTTGTGAC...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGAGTCACAAGTGCCACATaGAGCTGTTCTGCCCTAAGG +
Preference number: 4 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGVTSAT*SCSALR
Trigger: CCTTAGGGCAGAACAGCTGCATGTGGCACTTGTGAC...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp CACGTTCAGGAAGAGCTCATTCTGCAGCAGCATATGAGCCCCTCGGGCACCCAGTGTGGCACAGGACAGTaGGCTGATCCCTCCGCTGAG +
Preference number: 4 (lower is better)
Translates to: HVQEELILQQHMSPSGTQCGTGQ*ADPSAE
Trigger: CTCAGCGGAGGGATCAGCGCACTGTCCTGTGCCACA...CTGGGTGCCCGAGGGGCTCATATGCTGCTGCAGAATGAGCTCTTCCTGAACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp GCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCAAGCCAGGCGTGCCCTaGTGCTTGGCTCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: AKALGFPQENARRSSMPPKPGVP*CLALHR
Trigger: CCTGTGAAGAGCCAAGCAGCAGGGCACGCCTGGCTT...GGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCTTGGCTATGTGCACCTaGCCTCGGAGCTCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: RHWASHRRMQEGPRCHPFLAMCT*PRSSPL
Trigger: CAGAGGGGAGCTCCGAGGGCAGGTGCACATAGCCAA...GAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCGTGGGGGCGCTGCTaGCCCTCGAAGAAGCATGTG +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMPWGRC*PSKKHV
Trigger: CACATGCTTCTTCGAGGGGCAGCAGCGCCCCCACGG...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp ATACAAAACTCTCCAATAATGACTCTGCTCAGCTCAGGGGCAGCAGGAGTGGAGGGGGGCACAACGGGGTaGCACCGCGTACCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: IQNSPIMTLLSSGAAGVEGGTTG*HRVPAA
Trigger: GGCAGCGGGTACGCGGTGGCACCCCGTTGTGCCCCC...CTCCACTCCTGCTGCCCCTGAGCTGAGCAGAGTCATTATTGGAGAGTTTTGTAT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp GCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCACTTGGCCCTCTGGCTaGTCCCTAAGAGCCTTCGGC +
Preference number: 4 (lower is better)
Translates to: AKALGFPQENARRSSMPPTWPSG*SLRAFG
Trigger: GCCGAAGGCTCTTAGGGAGCAGCCAGAGGGCCAAGT...GGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGCAAGAAGGTCCTCGATaGCACCCCTTCCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LGFPQENARRSSMPPLPQQEGPR*HPFPSS
Trigger: TGAGCTGGGGAAGGGGTGGCATCGAGGACCTTCTTG...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp GCACCCGTCTGGACTGGGATCAGGGCATCAGCCCCACAAAGGACACTTTGCAGGCAAGAAGGTCCTCGATaGCACCCCTTCCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: APVWTGIRASAPQRTLCRQEGPR*HPFPSS
Trigger: TGAGCTGGGGAAGGGGTGGCATCGAGGACCTTCTTG...CCTGCAAAGTGTCCTTTGTGGGGCTGATGCCCTGATCCCAGTCCAGACGGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp CCCCCGAAGCTCTCCGTCTGGGAAGTCCTTGGTGCCCACGTTCAGGAAGAGCTCAGTTCTCGCAGTAGCTaGCCCTGGTGTAGAATCCCC +
Preference number: 4 (lower is better)
Translates to: PPKLSVWEVLGAHVQEELSSRSS*PWCRIP
Trigger: GGGGATTCTACACCAGGGGCAGCTACTGCGAGAACT...GAGCTCTTCCTGAACGTGGGCACCAAGGACTTCCCAGACGGAGAGCTTCGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGCGGGGTTGGGCACTCTaGTTTGATGTTCTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVRGWAL*FDVLAA
Trigger: AGCTGCAAGAACATCAAACCAGAGTGCCCAACCCCG...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp ATACAAAACTCTCCAATAATGACTCTGCTCAGCTCAGGGGCAGCAGGAGTGGAGCAGTGTCCCGGCAGCTaGCGCGGCTGCCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: IQNSPIMTLLSSGAAGVEQCPGS*RGCPQA
Trigger: GGCCTGTGGGCAGCCGCGCCAGCTGCCGGGACACTG...CTCCACTCCTGCTGCCCCTGAGCTGAGCAGAGTCATTATTGGAGAGTTTTGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGGAACTGCTGCGCTCCTaGGGGCAGGTCTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMELLRS*GQVWQQ
Trigger: CTGCTGCCAGACCTGCCCCCAGGAGCGCAGCAGTTC...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGCCTGGGCTGAGACATTaGCCTGAAGTTCTCGCAGTA +
Preference number: 4 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVPGLRH*PEVLAV
Trigger: TACTGCGAGAACTTCAGGCCAATGTCTCAGCCCAGG...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GCACCCGTCTGGACTGGGATCAGGGCATCAGCCCCACAAAGGACACTTTGCAGGAGCCAGTCCATCTCCTaGACTGTCAGGTTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: APVWTGIRASAPQRTLCRSQSIS*TVRLGS
Trigger: GCTGCCCAACCTGACAGTCCAGGAGATGGACTGGCT...CCTGCAAAGTGTCCTTTGTGGGGCTGATGCCCTGATCCCAGTCCAGACGGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp AAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTAGCACCCGTCTGGACTaGGATCAGGGCATCAGCCCC +
Preference number: 4 (lower is better)
Translates to: KGTGLPTGECKKVLDATPSTRLD*DQGISP
Trigger: GGGGCTGATGCCCTGATCCCAGTCCAGACGGGTGCT...AGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTAGCACCCGTCTGGACTaGGATCAGGGCATCAGCCCC +
Preference number: 4 (lower is better)
Translates to: KALGFPQENARRSSMPPLSTRLD*DQGISP
Trigger: GGGGCTGATGCCCTGATCCCAGTCCAGACGGGTGCT...AAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACAGCACCCGTCTGGACTaGGATCAGGGCATCAGCCCC +
Preference number: 4 (lower is better)
Translates to: EQRHWASHRRMQEGPRCHSTRLD*DQGISP
Trigger: GGGGCTGATGCCCTGATCCCAGTCCAGACGGGTGCT...GTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTCCGGCAGCACCCGTCTaGACTGGGATCAGGGCATCA +
Preference number: 4 (lower is better)
Translates to: KGTGLPTGECKKVLDATPPAAPV*TGIRAS
Trigger: TGATGCCCTGATCCCAGTCCAGACGGGTGCTGCCGG...AGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp TCAGGGGCAGCAGGAGTGGAGTGTCGGGGGCCCTTGGTGCTGAGTGAAGATAAAGTGTGTCCTCCTGGCTaGAGTCCAGCCATGTGGCAC +
Preference number: 4 (lower is better)
Translates to: SGAAGVECRGPLVLSEDKVCPPG*SPAMWH
Trigger: GTGCCACATGGCTGGACTCCAGCCAGGAGGACACAC...TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000204604.5
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCGTGTGTCCTCCTGGCTaGAGTCCAGCCATGTGGCAC +
Preference number: 4 (lower is better)
Translates to: RHWASHRRMQEGPRCHPFVCPPG*SPAMWH
Trigger: GTGCCACATGGCTGGACTCCAGCCAGGAGGACACAC...GAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000204604.5
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCCGAAGCTCTCCGTCTaGGAAGTCCTTGGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: AKALGFPQENARRSSMPPPKLSV*EVLGAH
Trigger: GTGGGCACCAAGGACTTCCCAGACGGAGAGCTTCGG...GGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCGCGTGCCCTGCTGCTTaGCTCTTCACAGGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATACPAA*LFTGGS
Trigger: GCTACCCCCTGTGAAGAGCCAAGCAGCAGGGCACGC...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp CCTGTAGGAGATAGAGAAGCGGAGGCTAGAGCGCAGCAGCGAGACTCGGGCTCGCCGCCAACCTCACATTaGTTGGCTATGTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: PVGDREAEARAQQRDSGSPPTSH*LAMCTC
Trigger: GCAGGTGCACATAGCCAACCAATGTGAGGTTGGCGG...CGAGCCCGAGTCTCGCTGCTGCGCTCTAGCCTCCGCTTCTCTATCTCCTACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR CCA 90 bp GTGGTGATCATCAGGGAGGCCATGCCTTTTGCCAGGTGCCGCAGCAGTTCCGGCATCACCGTTCGTCTCTaGCAGGTGCAGAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: VVIIREAMPFARCRSSSGITVRL*QVQSEQ
Trigger: CTGCTCACTCTGCACCTGCCAGAGACGAACGGTGAT...GCCGGAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTCCCTGATGATCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCTGGGTCCCGGCTCCTTaGCAGCCCTGGCAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATWVPAP*QPWQVS
Trigger: AGAGACTTGCCAGGGCTGCCAAGGAGCCGGGACCCA...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTGGGTCCCGGCTCCTTaGCAGCCCTGGCAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: KGTGLPTGECKKVLDATPWVPAP*QPWQVS
Trigger: AGAGACTTGCCAGGGCTGCCAAGGAGCCGGGACCCA...AGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GTCCTTGGTGCCCACGTTCAGGAAGAGCTCATTCTGCAGCAGCATATGAGCCCCATAGCAGCCCTCTCCTaGGTCCCGGCTCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: VLGAHVQEELILQQHMSPIAALS*VPAPWQ
Trigger: CTGCCAAGGAGCCGGGACCCAGGAGAGGGCTGCTAT...GGGGCTCATATGCTGCTGCAGAATGAGCTCTTCCTGAACGTGGGCACCAAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp GAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACATAGCAGCCCTCTCCTaGGTCCCGGCTCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: EQRHWASHRRMQEGPRCHIAALS*VPAPWQ
Trigger: CTGCCAAGGAGCCGGGACCCAGGAGAGGGCTGCTAT...GTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AAGGAAAGCCAGGCGTGCCCTGCTGCTTGGCTCTTCACAGGGGGTAGCACCAGGCCAGCTCTGACTCTCTaGGAACCACTGCCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: KESQACPAAWLFTGGSTRPALTL*EPLPSK
Trigger: TTTGCTGGGCAGTGGTTCCCAGAGAGTCAGAGCTGG...CCTGGTGCTACCCCCTGTGAAGAGCCAAGCAGCAGGGCACGCCTGGCTTTCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp CACGTTCAGGAAGAGCTCATTCTGCAGCAGCATATGAGCCCCTCGGGCACCCAGCAGGCCCCATCCTCTTaGTCACTTGGCCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: HVQEELILQQHMSPSGTQQAPSS*SLGPLA
Trigger: AGCCAGAGGGCCAAGTGACCAAGAGGATGGGGCCTG...CTGGGTGCCCGAGGGGCTCATATGCTGCTGCAGAATGAGCTCTTCCTGAACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp AACAGGACACTGCCATTGGAGTCTGAGAAGCGGATCCTGGTAGGGCGGTCCAGCCAGGCCCCATCCTCTTaGTCACTTGGCCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: NRTLPLESEKRILVGRSSQAPSS*SLGPLA
Trigger: AGCCAGAGGGCCAAGTGACCAAGAGGATGGGGCCTG...GCTGGACCGCCCTACCAGGATCCGCTTCTCAGACTCCAATGGCAGTGTCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR CCA 90 bp AGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCAGGCCCCATCCTCTTaGTCACTTGGCCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: RHWASHRRMQEGPRCHPFQAPSS*SLGPLA
Trigger: AGCCAGAGGGCCAAGTGACCAAGAGGATGGGGCCTG...GAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp TCAGGGGCAGCAGGAGTGGAGTGTCGGGGGCCCTTGGTGCTGAGTGAAGATAAATGGCAGGGCAGGACTTaGAGTGGCTGTGACCTCGGT +
Preference number: 4 (lower is better)
Translates to: SGAAGVECRGPLVLSEDKWQGRT*SGCDLG
Trigger: ACCGAGGTCACAGCCACTCCAAGTCCTGCCCTGCCA...TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTGCTCTGGATCAGTTCTaGTCTCTGGGGGCCGCCGGT +
Preference number: 4 (lower is better)
Translates to: KALGFPQENARRSSMPPLALDQF*SLGAAG
Trigger: ACCGGCGGCCCCCAGAGACCAGAACTGATCCAGAGC...AAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450923.5
CDS-3UTR TCA 90 bp ATACAAAACTCTCCAATAATGACTCTGCTCAGCTCAGGGGCAGCAGGAGTGGAGCCGGGAGGCTCGGCATaGCGCGAACGGGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: IQNSPIMTLLSSGAAGVEPGGSA*RERDSW
Trigger: CCAGCTGTCCCGTTCGCGTCATGCCGAGCCTCCCGG...CTCCACTCCTGCTGCCCCTGAGCTGAGCAGAGTCATTATTGGAGAGTTTTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000204604.5
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp AGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCACCTCCCCTGAAGGGTaGGTGAGTGTCACAAGTGCC +
Preference number: 4 (lower is better)
Translates to: RHWASHRRMQEGPRCHPFTSPEG*VSVTSA
Trigger: GGCACTTGTGACACTCACTCACCCTTCAGGGGAGGT...GAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp ATACAAAACTCTCCAATAATGACTCTGCTCAGCTCAGGGGCAGCAGGAGTGGAGCAGCGTGAGGCTGGCTaGGCCGGCAGCACCCGTCTG +
Preference number: 4 (lower is better)
Translates to: IQNSPIMTLLSSGAAGVEQREAG*AGSTRL
Trigger: CAGACGGGTGCTGCCGGCTCAGCCAGCCTCACGCTG...CTCCACTCCTGCTGCCCCTGAGCTGAGCAGAGTCATTATTGGAGAGTTTTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp AAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTGGCTACCCTTGGTGGTaGTCATCAGGGAGGCCATGC +
Preference number: 4 (lower is better)
Translates to: KALGFPQENARRSSMPPLGYPWW*SSGRPC
Trigger: GCATGGCCTCCCTGATGATCACCACCAAGGGTAGCC...AAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp AAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTGGCTACCCTTGGTGGTaGTCATCAGGGAGGCCATGC +
Preference number: 4 (lower is better)
Translates to: KGTGLPTGECKKVLDATPGYPWW*SSGRPC
Trigger: GCATGGCCTCCCTGATGATCACCACCAAGGGTAGCC...AGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp GTCCTTGGTGCCCACGTTCAGGAAGAGCTCATTCTGCAGCAGCATATGAGCCCCCTGGCAGGTGCAGAGTaGGCAGAGCGGGTCGTAGTT +
Preference number: 4 (lower is better)
Translates to: VLGAHVQEELILQQHMSPLAGAE*AERVVV
Trigger: AACTACGACCCGCTCTGCTCACTCTGCACCTGCCAG...GGGGCTCATATGCTGCTGCAGAATGAGCTCTTCCTGAACGTGGGCACCAAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR TCA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGGCCCTGGCAAGTCTCTaGCATCTTGTTTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: LGFPQENARRSSMPPLPQALASL*HLVSQG
Trigger: GCCCTGAGAAACAAGATGTCAGAGACTTGCCAGGGC...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGACAGGACAGTGGCAGTaGACAGTCATCCCGCTCACA +
Preference number: 4 (lower is better)
Translates to: LGFPQENARRSSMPPLPQTGQWQ*TVIPLT
Trigger: TGTGAGCGGGATGACTGTTCACTGCCACTGTCCTGT...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGGACTTGGAGTGGCTGTaGCCTCGGTCTGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMDLEWL*PRSGPA
Trigger: AGCTGGGCCAGACCGAGGTCACAGCCACTCCAAGTC...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp ATACAAAACTCTCCAATAATGACTCTGCTCAGCTCAGGGGCAGCAGGAGTGGAGGCTCGTGCCACCGCCTaGGACCTCGGCCCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: IQNSPIMTLLSSGAAGVEARATA*DLGPVS
Trigger: GCTGACAGGGCCGAGGTCGCAGGCGGTGGCACGAGC...CTCCACTCCTGCTGCCCCTGAGCTGAGCAGAGTCATTATTGGAGAGTTTTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCGTGGGGGCTGCAGGGTaGTCAAACAGGACACTGCCA +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATVGAAG*SNRTLP
Trigger: TGGCAGTGTCCTGTTTGAGCACCCTGCAGCCCCCAC...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp GCAGGGTGCTCAAACAGGACACTGCCATTGGAGTCTGAGAAGCGGATCCTGGTAAGACAACCGAGGCACTaGCCGCCACACCCCACAGAC +
Preference number: 4 (lower is better)
Translates to: AGCSNRTLPLESEKRILVRQPRH*PPHPTD
Trigger: GTCTGTGGGGTGTGGCGGGCAGTGCCTCGGTTGTCT...TACCAGGATCCGCTTCTCAGACTCCAATGGCAGTGTCCTGTTTGAGCACCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR GCA 90 bp CAGGCCATCTTGGGTGGGGGCTGCAGGGTGCTCAAACAGGACACTGCCATTGGACACATGCAGCTGTTCTaGCCTAAGGAGCCGCAGAGA +
Preference number: 4 (lower is better)
Translates to: QAILGGGCRVLKQDTAIGHMQLF*PKEPQR
Trigger: TCTCTGCGGCTCCTTAGGGCAGAACAGCTGCATGTG...TCCAATGGCAGTGTCCTGTTTGAGCACCCTGCAGCCCCCACCCAAGATGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR GCA 90 bp ATCATCAGGGAGGCCATGCCTTTTGCCAGGTGCCGCAGCAGTTCCGGCTCCAGGGTCACAAGTGCCACATaGAGCTGTTCTGCCCTAAGG +
Preference number: 4 (lower is better)
Translates to: IIREAMPFARCRSSSGSRVTSAT*SCSALR
Trigger: CCTTAGGGCAGAACAGCTGCATGTGGCACTTGTGAC...CCTGGAGCCGGAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTCCCTGATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp AAGGAAAGCCAGGCGTGCCCTGCTGCTTGGCTCTTCACAGGGGGTAGCACCAGGGTCACAAGTGCCACATaGAGCTGTTCTGCCCTAAGG +
Preference number: 4 (lower is better)
Translates to: KESQACPAAWLFTGGSTRVTSAT*SCSALR
Trigger: CCTTAGGGCAGAACAGCTGCATGTGGCACTTGTGAC...CCTGGTGCTACCCCCTGTGAAGAGCCAAGCAGCAGGGCACGCCTGGCTTTCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp CAGGCCATCTTGGGTGGGGGCTGCAGGGTGCTCAAACAGGACACTGCCATTGGATGGCCACCACCTCACTaGTTGTCCCTACCACTTGCA +
Preference number: 4 (lower is better)
Translates to: QAILGGGCRVLKQDTAIGWPPPH*LSLPLA
Trigger: TGCAAGTGGTAGGGACAAGCAGTGAGGTGGTGGCCA...TCCAATGGCAGTGTCCTGTTTGAGCACCCTGCAGCCCCCACCCAAGATGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR GCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCTGTGGCACAGGACAGTaGGCTGATCCCTCCGCTGAG +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATCGTGQ*ADPSAE
Trigger: CTCAGCGGAGGGATCAGCGCACTGTCCTGTGCCACA...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204604.5
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTATGCCTTTTGCCAGGTaGCGCAGCAGTTCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: KALGFPQENARRSSMPPLMPFAR*RSSSGS
Trigger: GGAGCCGGAACTGCTGCGGCACCTGGCAAAAGGCAT...AAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTGGAGGCCATGCCTTTTaGCAGGTGCCGCAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: KALGFPQENARRSSMPPLGGHAF*QVPQQF
Trigger: GAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTCC...AAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCGGAGGCCATGCCTTTTaGCAGGTGCCGCAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATGGHAF*QVPQQF
Trigger: GAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTCC...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTTGGCTATGTGCACCTaGCCTCGGAGCTCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: KGTGLPTGECKKVLDATPLAMCT*PRSSPL
Trigger: CAGAGGGGAGCTCCGAGGGCAGGTGCACATAGCCAA...AGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp GCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCTTCGTCTCTGGCAGGTaGAGAGTGAGCAGAGCGGGT +
Preference number: 4 (lower is better)
Translates to: AKALGFPQENARRSSMPPFVSGR*RVSRAG
Trigger: ACCCGCTCTGCTCACTCTGCACCTGCCAGAGACGAA...GGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp TCAGGGGCAGCAGGAGTGGAGTGTCGGGGGCCCTTGGTGCTGAGTGAAGATAAATTCGTCTCTGGCAGGTaGAGAGTGAGCAGAGCGGGT +
Preference number: 4 (lower is better)
Translates to: SGAAGVECRGPLVLSEDKFVSGR*RVSRAG
Trigger: ACCCGCTCTGCTCACTCTGCACCTGCCAGAGACGAA...TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCACAGTGAGGCACCCCTaGCCCACATCTGCAGGTGAT +
Preference number: 4 (lower is better)
Translates to: RHWASHRRMQEGPRCHPFTVRHP*PTSAGD
Trigger: ATCACCTGCAGATGTGGGGCAGGGGTGCCTCACTGT...GAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp CACGTTCAGGAAGAGCTCATTCTGCAGCAGCATATGAGCCCCTCGGGCACCCAGACAGTGAGGCACCCCTaGCCCACATCTGCAGGTGAT +
Preference number: 4 (lower is better)
Translates to: HVQEELILQQHMSPSGTQTVRHP*PTSAGD
Trigger: ATCACCTGCAGATGTGGGGCAGGGGTGCCTCACTGT...CTGGGTGCCCGAGGGGCTCATATGCTGCTGCAGAATGAGCTCTTCCTGAACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp ATACAAAACTCTCCAATAATGACTCTGCTCAGCTCAGGGGCAGCAGGAGTGGAGGCCGCCGGTGGGCCGTaGAGCGGGAACAGCATCGAC +
Preference number: 4 (lower is better)
Translates to: IQNSPIMTLLSSGAAGVEAAGGP*SGNSID
Trigger: GTCGATGCTGTTCCCGCTGCACGGCCCACCGGCGGC...CTCCACTCCTGCTGCCCCTGAGCTGAGCAGAGTCATTATTGGAGAGTTTTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCACTTGGCCCTCTGGCTaGTCCCTAAGAGCCTTCGGC +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATTWPSG*SLRAFG
Trigger: GCCGAAGGCTCTTAGGGAGCAGCCAGAGGGCCAAGT...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp ACCCGTCTGGACTGGGATCAGGGCATCAGCCCCACAAAGGACACTTTGCAGGACCCCACAGGCCGGGGTTaGGCACTCTGGTTTGATGTT +
Preference number: 4 (lower is better)
Translates to: TRLDWDQGISPTKDTLQDPTGRG*ALWFDV
Trigger: AACATCAAACCAGAGTGCCCAACCCCGGCCTGTGGG...GTCCTGCAAAGTGTCCTTTGTGGGGCTGATGCCCTGATCCCAGTCCAGACGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp TCAGGGGCAGCAGGAGTGGAGTGTCGGGGGCCCTTGGTGCTGAGTGAAGATAAACCCACAGGCCGGGGTTaGGCACTCTGGTTTGATGTT +
Preference number: 4 (lower is better)
Translates to: SGAAGVECRGPLVLSEDKPTGRG*ALWFDV
Trigger: AACATCAAACCAGAGTGCCCAACCCCGGCCTGTGGG...TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp TCAGGGGCAGCAGGAGTGGAGTGTCGGGGGCCCTTGGTGCTGAGTGAAGATAAAAGCCTCAAGGGAACCTaGGTTAGTCCCCCACTCCTG +
Preference number: 4 (lower is better)
Translates to: SGAAGVECRGPLVLSEDKSLKGT*VSPPLL
Trigger: CAGGAGTGGGGGACTAACCCAGGTTCCCTTGAGGCT...TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000450923.5
CDS-3UTR CCA 90 bp AGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCAGCCTCAAGGGAACCTaGGTTAGTCCCCCACTCCTG +
Preference number: 4 (lower is better)
Translates to: RHWASHRRMQEGPRCHPFSLKGT*VSPPLL
Trigger: CAGGAGTGGGGGACTAACCCAGGTTCCCTTGAGGCT...GAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000450923.5
CDS-3UTR CCA 90 bp GCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCAGCCAGTCCATCTCCTaGACTGTCAGGTTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: AKALGFPQENARRSSMPPSQSIS*TVRLGS
Trigger: GCTGCCCAACCTGACAGTCCAGGAGATGGACTGGCT...GGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GTCCTTGGTGCCCACGTTCAGGAAGAGCTCATTCTGCAGCAGCATATGAGCCCCCCCTCCGCTGAGGCTTaGTCTCCAGTGTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: VLGAHVQEELILQQHMSPPSAEA*SPVSWP
Trigger: TGGCCATGACACTGGAGACCAAGCCTCAGCGGAGGG...GGGGCTCATATGCTGCTGCAGAATGAGCTCTTCCTGAACGTGGGCACCAAGGAC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp AAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCTCCGCTGAGGCTTaGTCTCCAGTGTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: KALGFPQENARRSSMPPLPSAEA*SPVSWP
Trigger: TGGCCATGACACTGGAGACCAAGCCTCAGCGGAGGG...AAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000204604.5
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AGTCCTTGGTGCCCACGTTCAGGAAGAGCTCATTCTGCAGCAGCATATGAGCCCGGCCGTGTGTCCTCCTaGCTGGAGTCCAGCCATGTG +
Preference number: 4 (lower is better)
Translates to: SPWCPRSGRAHSAAAYEPGRVSS*LESSHV
Trigger: CACATGGCTGGACTCCAGCCAGGAGGACACACGGCC...GGGCTCATATGCTGCTGCAGAATGAGCTCTTCCTGAACGTGGGCACCAAGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp CAGGCCATCTTGGGTGGGGGCTGCAGGGTGCTCAAACAGGACACTGCCATTGGACGTCTGGGAAGTCCTTaGTGCCCACGTTCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: QAILGGGCRVLKQDTAIGRLGSP*CPRSGR
Trigger: TCTTCCTGAACGTGGGCACCAAGGACTTCCCAGACG...TCCAATGGCAGTGTCCTGTTTGAGCACCCTGCAGCCCCCACCCAAGATGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR CCA 90 bp GGGCACACCACCGGGTCACAGATCACCGTTCGTCTCTGGCAGGTGCAGAGTGAGCAACCTCACATTGGTTaGCTATGTGCACCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: GHTTGSQITVRLWQVQSEQPHIG*LCAPAL
Trigger: GAGGGCAGGTGCACATAGCCAACCAATGTGAGGTTG...CTCACTCTGCACCTGCCAGAGACGAACGGTGATCTGTGACCCGGTGGTGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCGAAGAAGCATGTGTTaGGGTCTCGGGGCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMRRSMC*GLGAAQ
Trigger: CTGGGCGGCCCCGAGACCCCAACACATGCTTCTTCG...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp ATACAAAACTCTCCAATAATGACTCTGCTCAGCTCAGGGGCAGCAGGAGTGGAGAGCCTGCACCGGGTGTaGGCAGCTGGGCGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: IQNSPIMTLLSSGAAGVESLHRV*AAGRWA
Trigger: TGCCCACCGCCCAGCTGCCCACACCCGGTGCAGGCT...CTCCACTCCTGCTGCCCCTGAGCTGAGCAGAGTCATTATTGGAGAGTTTTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGGCTCCTTGGCAGCCCTaGCAAGTCTCTGACATCTTG +
Preference number: 4 (lower is better)
Translates to: LGFPQENARRSSMPPLPQAPWQP*QVSDIL
Trigger: CAAGATGTCAGAGACTTGCCAGGGCTGCCAAGGAGC...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGCCAGCTCTGACTCTCTaGGAACCACTGCCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: LGFPQENARRSSMPPLPQPALTL*EPLPSK
Trigger: TTTGCTGGGCAGTGGTTCCCAGAGAGTCAGAGCTGG...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp CAGGCCATCTTGGGTGGGGGCTGCAGGGTGCTCAAACAGGACACTGCCATTGGACCAGCTCTGACTCTCTaGGAACCACTGCCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: QAILGGGCRVLKQDTAIGPALTL*EPLPSK
Trigger: TTTGCTGGGCAGTGGTTCCCAGAGAGTCAGAGCTGG...TCCAATGGCAGTGTCCTGTTTGAGCACCCTGCAGCCCCCACCCAAGATGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR CCA 90 bp AGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCGGTCACTTGGCCCTCTaGCTGCTCCCTAAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: RHWASHRRMQEGPRCHPFGHLAL*LLPKSL
Trigger: AAGGCTCTTAGGGAGCAGCCAGAGGGCCAAGTGACC...GAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCGGTCACTTGGCCCTCTaGCTGCTCCCTAAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: AKALGFPQENARRSSMPPGHLAL*LLPKSL
Trigger: AAGGCTCTTAGGGAGCAGCCAGAGGGCCAAGTGACC...GGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCCCTTGTGGAGCTGTaGTTCCCAGAGGTAGTGGGG +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATPLVEL*FPEVVG
Trigger: CCCCACTACCTCTGGGAACCACAGCTCCACAAGGGG...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACTGCCTCTCCCCCTTGTaGAGCTGTGGTTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: EQRHWASHRRMQEGPRCHCLSPL*SCGSQR
Trigger: CCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCA...GTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCTGCCTCTCCCCCTTGTaGAGCTGTGGTTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATCLSPL*SCGSQR
Trigger: CCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCA...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp TCAGGGGCAGCAGGAGTGGAGTGTCGGGGGCCCTTGGTGCTGAGTGAAGATAAACGCAGTAGCTGCCCCTaGTGTAGAATCCCCACTCCT +
Preference number: 4 (lower is better)
Translates to: SGAAGVECRGPLVLSEDKRSSCP*CRIPTP
Trigger: AGGAGTGGGGATTCTACACCAGGGGCAGCTACTGCG...TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR TCA 90 bp GCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCACTGCCATTGGAGTCTaGGAAGCGGATCCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: AKALGFPQENARRSSMPPTAIGV*EADPGR
Trigger: CCTACCAGGATCCGCTTCTCAGACTCCAATGGCAGT...GGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp TCAGGGGCAGCAGGAGTGGAGTGTCGGGGGCCCTTGGTGCTGAGTGAAGATAAACCCCTGAAGGGTGAGTaGGTGTCACAAGTGCCACAT +
Preference number: 4 (lower is better)
Translates to: SGAAGVECRGPLVLSEDKPLKGE*VSQVPH
Trigger: ATGTGGCACTTGTGACACTCACTCACCCTTCAGGGG...TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp AAGTGCCACATGCAGCTGTTCTGCCCTAAGGAGCCGCAGAGACAACCGAGGCACCCCCTGAAGGGTGAGTaGGTGTCACAAGTGCCACAT +
Preference number: 4 (lower is better)
Translates to: KCHMQLFCPKEPQRQPRHPLKGE*VSQVPH
Trigger: ATGTGGCACTTGTGACACTCACTCACCCTTCAGGGG...GTGCCTCGGTTGTCTCTGCGGCTCCTTAGGGCAGAACAGCTGCATGTGGCACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR TCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCACCTCCCCTGAAGGGTaGGTGAGTGTCACAAGTGCC +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATTSPEG*VSVTSA
Trigger: GGCACTTGTGACACTCACTCACCCTTCAGGGGAGGT...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp TCAGGGGCAGCAGGAGTGGAGTGTCGGGGGCCCTTGGTGCTGAGTGAAGATAAAGCTGAGACATTGGCCTaGAGTTCTCGCAGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: SGAAGVECRGPLVLSEDKAETLA*SSRSSC
Trigger: GCAGCTACTGCGAGAACTTCAGGCCAATGTCTCAGC...TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCACACCCTGGGCCTCTaGGCCATAGAATCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATHTLGL*AIESLQ
Trigger: CTGAAGGGATTCTATGGCTCAGAGGCCCAGGGTGTG...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCTGGCAGGTGCAGAGTaGGCAGAGCGGGTCGTAGTT +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMLAGAE*AERVVV
Trigger: AACTACGACCCGCTCTGCTCACTCTGCACCTGCCAG...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp AGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCGCCCTGGCAAGTCTCTaGCATCTTGTTTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: RHWASHRRMQEGPRCHPFALASL*HLVSQG
Trigger: GCCCTGAGAAACAAGATGTCAGAGACTTGCCAGGGC...GAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp TCAGGGGCAGCAGGAGTGGAGTGTCGGGGGCCCTTGGTGCTGAGTGAAGATAAAACAGGACAGTGGCAGTaGACAGTCATCCCGCTCACA +
Preference number: 4 (lower is better)
Translates to: SGAAGVECRGPLVLSEDKTGQWQ*TVIPLT
Trigger: TGTGAGCGGGATGACTGTTCACTGCCACTGTCCTGT...TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTATCTTGGGTGGGGGCTaGAGGGTGCTCAAACAGGAC +
Preference number: 4 (lower is better)
Translates to: KALGFPQENARRSSMPPLILGGG*RVLKQD
Trigger: GTCCTGTTTGAGCACCCTGCAGCCCCCACCCAAGAT...AAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp CACGTTCAGGAAGAGCTCATTCTGCAGCAGCATATGAGCCCCTCGGGCACCCAGTGGCCACCACCTCACTaGTTGTCCCTACCACTTGCA +
Preference number: 4 (lower is better)
Translates to: HVQEELILQQHMSPSGTQWPPPH*LSLPLA
Trigger: TGCAAGTGGTAGGGACAAGCAGTGAGGTGGTGGCCA...CTGGGTGCCCGAGGGGCTCATATGCTGCTGCAGAATGAGCTCTTCCTGAACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp GCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTGGGAAGTCCTTGGTaGCCACGTTCAGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: AKALGFPQENARRSSMPPLGSPW*PRSGRA
Trigger: AGCTCTTCCTGAACGTGGGCACCAAGGACTTCCCAG...GGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp ATACAAAACTCTCCAATAATGACTCTGCTCAGCTCAGGGGCAGCAGGAGTGGAGGGCAGGGCAGCCACGTaGCCCCGAAGCTCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: IQNSPIMTLLSSGAAGVEGRAAT*PRSSPS
Trigger: AGACGGAGAGCTTCGGGGGCACGTGGCTGCCCTGCC...CTCCACTCCTGCTGCCCCTGAGCTGAGCAGAGTCATTATTGGAGAGTTTTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp GAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACAAGGAAAGCCAGGCGTaGCCTGCTGCTTGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: EQRHWASHRRMQEGPRCHKESQA*PAAWLF
Trigger: GAAGAGCCAAGCAGCAGGGCACGCCTGGCTTTCCTT...GTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCTCATCAGGGAGGCCATaGCTTTTGCCAGGTGCCGCA +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATSSGRP*LLPGAA
Trigger: TGCGGCACCTGGCAAAAGGCATGGCCTCCCTGATGA...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp GAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACTTCGTCTCTGGCAGGTaGAGAGTGAGCAGAGCGGGT +
Preference number: 4 (lower is better)
Translates to: EQRHWASHRRMQEGPRCHFVSGR*RVSRAG
Trigger: ACCCGCTCTGCTCACTCTGCACCTGCCAGAGACGAA...GTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCTCTCTGGGAACCACTaGCCAGCAAAACGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMLSGNH*PAKRQP
Trigger: GGGCTGCCGTTTTGCTGGGCAGTGGTTCCCAGAGAG...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCACAGTGAGGCACCCCTaGCCCACATCTGCAGGTGAT +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATTVRHP*PTSAGD
Trigger: ATCACCTGCAGATGTGGGGCAGGGGTGCCTCACTGT...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGACTTGGCCCTCTGGCTaGTCCCTAAGAGCCTTCGGC +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMTWPSG*SLRAFG
Trigger: GCCGAAGGCTCTTAGGGAGCAGCCAGAGGGCCAAGT...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCAAGAAGGTCCTCGATaGCACCCCTTCCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATQEGPR*HPFPSS
Trigger: TGAGCTGGGGAAGGGGTGGCATCGAGGACCTTCTTG...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp CAGGCCATCTTGGGTGGGGGCTGCAGGGTGCTCAAACAGGACACTGCCATTGGACGGGGTTGGGCACTCTaGTTTGATGTTCTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: QAILGGGCRVLKQDTAIGRGWAL*FDVLAA
Trigger: AGCTGCAAGAACATCAAACCAGAGTGCCCAACCCCG...TCCAATGGCAGTGTCCTGTTTGAGCACCCTGCAGCCCCCACCCAAGATGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR CCA 90 bp AAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCACAGGCCGGGGTTaGGCACTCTGGTTTGATGTT +
Preference number: 4 (lower is better)
Translates to: KALGFPQENARRSSMPPLPTGRG*ALWFDV
Trigger: AACATCAAACCAGAGTGCCCAACCCCGGCCTGTGGG...AAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp ATACAAAACTCTCCAATAATGACTCTGCTCAGCTCAGGGGCAGCAGGAGTGGAGTCCTGGGGGCAGGTCTaGCAGCAGTGTCCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: IQNSPIMTLLSSGAAGVESWGQV*QQCPGS
Trigger: GCTGCCGGGACACTGCTGCCAGACCTGCCCCCAGGA...CTCCACTCCTGCTGCCCCTGAGCTGAGCAGAGTCATTATTGGAGAGTTTTGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCGCAGTAGCTGCCCCTaGTGTAGAATCTGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: KALGFPQENARRSSMPPLRSSCP*CRIWSL
Trigger: GAGGCTCCAGATTCTACACCAGGGGCAGCTACTGCG...AAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000450923.5
CDS-3UTR CCA 90 bp AAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTAGCCAGTCCATCTCCTaGACTGTCAGGTTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: KGTGLPTGECKKVLDATPSQSIS*TVRLGS
Trigger: GCTGCCCAACCTGACAGTCCAGGAGATGGACTGGCT...AGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACAGCCAGTCCATCTCCTaGACTGTCAGGTTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: EQRHWASHRRMQEGPRCHSQSIS*TVRLGS
Trigger: GCTGCCCAACCTGACAGTCCAGGAGATGGACTGGCT...GTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGGTGTGTCCTCCTGGCTaGAGTCCAGCCATGTGGCAC +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMVCPPG*SPAMWH
Trigger: GTGCCACATGGCTGGACTCCAGCCAGGAGGACACAC...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204604.5
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCGAAGCTCTCCGTCTaGGAAGTCCTTGGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMPKLSV*EVLGAH
Trigger: GTGGGCACCAAGGACTTCCCAGACGGAGAGCTTCGG...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCATCACCGTTCGTCTCTaGCAGGTGCAGAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: RHWASHRRMQEGPRCHPFITVRL*QVQSEQ
Trigger: CTGCTCACTCTGCACCTGCCAGAGACGAACGGTGAT...GAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp ATACAAAACTCTCCAATAATGACTCTGCTCAGCTCAGGGGCAGCAGGAGTGGAGTGGGCAGCTGGGCGGTaGGCACACCACCGGGTCACA +
Preference number: 4 (lower is better)
Translates to: IQNSPIMTLLSSGAAGVEWAAGR*AHHRVT
Trigger: TGTGACCCGGTGGTGTGCCCACCGCCCAGCTGCCCA...CTCCACTCCTGCTGCCCCTGAGCTGAGCAGAGTCATTATTGGAGAGTTTTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACGGTCACTTGGCCCTCTaGCTGCTCCCTAAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: EQRHWASHRRMQEGPRCHGHLAL*LLPKSL
Trigger: AAGGCTCTTAGGGAGCAGCCAGAGGGCCAAGTGACC...GTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp TCAGGGGCAGCAGGAGTGGAGTGTCGGGGGCCCTTGGTGCTGAGTGAAGATAAAGAGGAGCAAAGGCACTaGGCTTCCCACAGGAGAATG +
Preference number: 4 (lower is better)
Translates to: SGAAGVECRGPLVLSEDKEEQRH*ASHRRM
Trigger: CATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTC...TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCGAGGAGCAAAGGCACTaGGCTTCCCACAGGAGAATG +
Preference number: 4 (lower is better)
Translates to: RHWASHRRMQEGPRCHPFEEQRH*ASHRRM
Trigger: CATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTC...GAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGTGGCAGGGCAGGACTTaGAGTGGCTGTGACCTCGGT +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMWQGRT*SGCDLG
Trigger: ACCGAGGTCACAGCCACTCCAAGTCCTGCCCTGCCA...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCACTGCCATTGGAGTCTaGGAAGCGGATCCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATTAIGV*EADPGR
Trigger: CCTACCAGGATCCGCTTCTCAGACTCCAATGGCAGT...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp AAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTCCCCTGAAGGGTGAGTaGGTGTCACAAGTGCCACAT +
Preference number: 4 (lower is better)
Translates to: KGTGLPTGECKKVLDATPPLKGE*VSQVPH
Trigger: ATGTGGCACTTGTGACACTCACTCACCCTTCAGGGG...AGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCGCTGAGACATTGGCCTaGAGTTCTCGCAGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATAETLA*SSRSSC
Trigger: GCAGCTACTGCGAGAACTTCAGGCCAATGTCTCAGC...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp AAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTGCTGAGACATTGGCCTaGAGTTCTCGCAGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: KALGFPQENARRSSMPPLAETLA*SSRSSC
Trigger: GCAGCTACTGCGAGAACTTCAGGCCAATGTCTCAGC...AAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCGCCCTGGCAAGTCTCTaGCATCTTGTTTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATALASL*HLVSQG
Trigger: GCCCTGAGAAACAAGATGTCAGAGACTTGCCAGGGC...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCACAGGACAGTGGCAGTaGACAGTCATCCCGCTCACA +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATTGQWQ*TVIPLT
Trigger: TGTGAGCGGGATGACTGTTCACTGCCACTGTCCTGT...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp ATACAAAACTCTCCAATAATGACTCTGCTCAGCTCAGGGGCAGCAGGAGTGGAGCGCGGTCGCTATAACTaGGATGCTCCGGGTCCCGCG +
Preference number: 4 (lower is better)
Translates to: IQNSPIMTLLSSGAAGVERGRYN*DAPGPA
Trigger: CGCGGGACCCGGAGCATCGCAGTTATAGCGACCGCG...CTCCACTCCTGCTGCCCCTGAGCTGAGCAGAGTCATTATTGGAGAGTTTTGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCACATGCAGCTGTTCTaGCCTAAGGAGCCGCAGAGA +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATHMQLF*PKEPQR
Trigger: TCTCTGCGGCTCCTTAGGGCAGAACAGCTGCATGTG...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGAGTGAGTGTCACAAGTaGCACATGCAGCTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LGFPQENARRSSMPPLPQSECHK*HMQLFC
Trigger: GCAGAACAGCTGCATGTGGCACTTGTGACACTCACT...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp CCACAGGCCGGGGTTGGGCACTCTGGTTTGATGTTCTTGCAGCTGACCCTGCCAAGTGAGTGTCACAAGTaGCACATGCAGCTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: PQAGVGHSGLMFLQLTLPSECHK*HMQLFC
Trigger: GCAGAACAGCTGCATGTGGCACTTGTGACACTCACT...TGGCAGGGTCAGCTGCAAGAACATCAAACCAGAGTGCCCAACCCCGGCCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR GCA 90 bp AAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTGGCCACCACCTCACTaGTTGTCCCTACCACTTGCA +
Preference number: 4 (lower is better)
Translates to: KGTGLPTGECKKVLDATPWPPPH*LSLPLA
Trigger: TGCAAGTGGTAGGGACAAGCAGTGAGGTGGTGGCCA...AGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000204604.5
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTCTGGGAAGTCCTTGGTaGCCACGTTCAGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: KGTGLPTGECKKVLDATPLGSPW*PRSGRA
Trigger: AGCTCTTCCTGAACGTGGGCACCAAGGACTTCCCAG...AGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp ATACAAAACTCTCCAATAATGACTCTGCTCAGCTCAGGGGCAGCAGGAGTGGAGCCAGGCGTGCCCTGCTaGTTGGCTCTTCACAGGGGG +
Preference number: 4 (lower is better)
Translates to: IQNSPIMTLLSSGAAGVEPGVPC*LALHRG
Trigger: CCCCCTGTGAAGAGCCAAGCAGCAGGGCACGCCTGG...CTCCACTCCTGCTGCCCCTGAGCTGAGCAGAGTCATTATTGGAGAGTTTTGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AGTCCTTGGTGCCCACGTTCAGGAAGAGCTCATTCTGCAGCAGCATATGAGCCCTCATCAGGGAGGCCATaGCTTTTGCCAGGTGCCGCA +
Preference number: 4 (lower is better)
Translates to: SPWCPRSGRAHSAAAYEPSSGRP*LLPGAA
Trigger: TGCGGCACCTGGCAAAAGGCATGGCCTCCCTGATGA...GGGCTCATATGCTGCTGCAGAATGAGCTCTTCCTGAACGTGGGCACCAAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp ACCCGTCTGGACTGGGATCAGGGCATCAGCCCCACAAAGGACACTTTGCAGGACCGGGGTTGGGCACTCTaGTTTGATGTTCTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: TRLDWDQGISPTKDTLQDRGWAL*FDVLAA
Trigger: AGCTGCAAGAACATCAAACCAGAGTGCCCAACCCCG...GTCCTGCAAAGTGTCCTTTGTGGGGCTGATGCCCTGATCCCAGTCCAGACGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp CACGTTCAGGAAGAGCTCATTCTGCAGCAGCATATGAGCCCCTCGGGCACCCAGACAGGACACTGCCATTaGAGTCTGAGAAGCGGATCC +
Preference number: 4 (lower is better)
Translates to: HVQEELILQQHMSPSGTQTGHCH*SLRSGS
Trigger: GGATCCGCTTCTCAGACTCCAATGGCAGTGTCCTGT...CTGGGTGCCCGAGGGGCTCATATGCTGCTGCAGAATGAGCTCTTCCTGAACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp TCAGGGGCAGCAGGAGTGGAGTGTCGGGGGCCCTTGGTGCTGAGTGAAGATAAAACAGGACACTGCCATTaGAGTCTGAGAAGCGGATCC +
Preference number: 4 (lower is better)
Translates to: SGAAGVECRGPLVLSEDKTGHCH*SLRSGS
Trigger: GGATCCGCTTCTCAGACTCCAATGGCAGTGTCCTGT...TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTGGTGTAGAATCTaGAGCCTCAAGGGAACCTGG +
Preference number: 4 (lower is better)
Translates to: EQRHWASHRRMQEGPRCHPWCRI*SLKGTW
Trigger: CCAGGTTCCCTTGAGGCTCCAGATTCTACACCAGGG...GTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000450923.5
CDS-3UTR CCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCGCAGTAGCTGCCCCTaGTGTAGAATCTGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMRSSCP*CRIWSL
Trigger: GAGGCTCCAGATTCTACACCAGGGGCAGCTACTGCG...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000450923.5
CDS-3UTR CCA 90 bp AGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCTGGGCTGAGACATTaGCCTGAAGTTCTCGCAGTA +
Preference number: 4 (lower is better)
Translates to: RHWASHRRMQEGPRCHPFPGLRH*PEVLAV
Trigger: TACTGCGAGAACTTCAGGCCAATGTCTCAGCCCAGG...GAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTTGGTCTCCAGTGTCATaGCCACCACCTCACTGCTTG +
Preference number: 4 (lower is better)
Translates to: KALGFPQENARRSSMPPLWSPVS*PPPHCL
Trigger: CAAGCAGTGAGGTGGTGGCCATGACACTGGAGACCA...AAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000204604.5
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCGTCTGGGAAGTCCTTaGTGCCCACGTTCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATRLGSP*CPRSGR
Trigger: TCTTCCTGAACGTGGGCACCAAGGACTTCCCAGACG...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp TTGGCCCTCTGGCTGCTCCCTAAGAGCCTTCGGCTTCTTTCTCCAGCTCTGGATCGTCTGGGAAGTCCTTaGTGCCCACGTTCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LALWLLPKSLRLLSPALDRLGSP*CPRSGR
Trigger: TCTTCCTGAACGTGGGCACCAAGGACTTCCCAGACG...ATCCAGAGCTGGAGAAAGAAGCCGAAGGCTCTTAGGGAGCAGCCAGAGGGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CCA 90 bp AGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCAACCTCACATTGGTTaGCTATGTGCACCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: RHWASHRRMQEGPRCHPFQPHIG*LCAPAL
Trigger: GAGGGCAGGTGCACATAGCCAACCAATGTGAGGTTG...GAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCGCCAACCTCACATTaGTTGGCTATGTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: EQRHWASHRRMQEGPRCHPPTSH*LAMCTC
Trigger: GCAGGTGCACATAGCCAACCAATGTGAGGTTGGCGG...GTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTATCACCGTTCGTCTCTaGCAGGTGCAGAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: KGTGLPTGECKKVLDATPITVRL*QVQSEQ
Trigger: CTGCTCACTCTGCACCTGCCAGAGACGAACGGTGAT...AGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGGGTCACTTGGCCCTCTaGCTGCTCCCTAAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMGHLAL*LLPKSL
Trigger: AAGGCTCTTAGGGAGCAGCCAGAGGGCCAAGTGACC...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACGAGGAGCAAAGGCACTaGGCTTCCCACAGGAGAATG +
Preference number: 4 (lower is better)
Translates to: EQRHWASHRRMQEGPRCHEEQRH*ASHRRM
Trigger: CATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTC...GTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGGCTGAGACATTGGCCTaGAGTTCTCGCAGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMAETLA*SSRSSC
Trigger: GCAGCTACTGCGAGAACTTCAGGCCAATGTCTCAGC...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp AAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCACATCTGCAGGTaGTACAGCTCATCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: KALGFPQENARRSSMPPLPHICR*YSSSLQ
Trigger: TTGGAGAGATGAGCTGTATCACCTGCAGATGTGGGG...AAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGACAGGACAGTGGCAGTaGACAGTCATCCCGCTCACA +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMTGQWQ*TVIPLT
Trigger: TGTGAGCGGGATGACTGTTCACTGCCACTGTCCTGT...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp ATACAAAACTCTCCAATAATGACTCTGCTCAGCTCAGGGGCAGCAGGAGTGGAGAGACAACCGAGGCACTaGCCGCCACACCCCACAGAC +
Preference number: 4 (lower is better)
Translates to: IQNSPIMTLLSSGAAGVERQPRH*PPHPTD
Trigger: GTCTGTGGGGTGTGGCGGGCAGTGCCTCGGTTGTCT...CTCCACTCCTGCTGCCCCTGAGCTGAGCAGAGTCATTATTGGAGAGTTTTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCACATGCAGCTGTTCTaGCCTAAGGAGCCGCAGAGA +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMHMQLF*PKEPQR
Trigger: TCTCTGCGGCTCCTTAGGGCAGAACAGCTGCATGTG...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AGTCCTTGGTGCCCACGTTCAGGAAGAGCTCATTCTGCAGCAGCATATGAGCCCCACATGCAGCTGTTCTaGCCTAAGGAGCCGCAGAGA +
Preference number: 4 (lower is better)
Translates to: SPWCPRSGRAHSAAAYEPHMQLF*PKEPQR
Trigger: TCTCTGCGGCTCCTTAGGGCAGAACAGCTGCATGTG...GGGCTCATATGCTGCTGCAGAATGAGCTCTTCCTGAACGTGGGCACCAAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR GCA 90 bp AAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTAGTTCTCGCAGTAGCTaGCCCTGGTGTAGAATCTGG +
Preference number: 4 (lower is better)
Translates to: KGTGLPTGECKKVLDATPSSRSS*PWCRIW
Trigger: CCAGATTCTACACCAGGGGCAGCTACTGCGAGAACT...AGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000450923.5
CDS-3UTR GCA 90 bp AAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTAGTTCTCGCAGTAGCTaGCCCTGGTGTAGAATCTGG +
Preference number: 4 (lower is better)
Translates to: KALGFPQENARRSSMPPLSSRSS*PWCRIW
Trigger: CCAGATTCTACACCAGGGGCAGCTACTGCGAGAACT...AAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000450923.5
CDS-3UTR GCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCTGGGAAGTCCTTGGTaGCCACGTTCAGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMLGSPW*PRSGRA
Trigger: AGCTCTTCCTGAACGTGGGCACCAAGGACTTCCCAG...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCACAGGACACTGCCATTaGAGTCTGAGAAGCGGATCC +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATTGHCH*SLRSGS
Trigger: GGATCCGCTTCTCAGACTCCAATGGCAGTGTCCTGT...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTGGGCTGAGACATTaGCCTGAAGTTCTCGCAGTA +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATPGLRH*PEVLAV
Trigger: TACTGCGAGAACTTCAGGCCAATGTCTCAGCCCAGG...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp ATACAAAACTCTCCAATAATGACTCTGCTCAGCTCAGGGGCAGCAGGAGTGGAGGCGTGCCCTGCTGCTTaGCTCTTCACAGGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: IQNSPIMTLLSSGAAGVEACPAA*LFTGGS
Trigger: GCTACCCCCTGTGAAGAGCCAAGCAGCAGGGCACGC...CTCCACTCCTGCTGCCCCTGAGCTGAGCAGAGTCATTATTGGAGAGTTTTGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTCAACCTCACATTGGTTaGCTATGTGCACCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: KGTGLPTGECKKVLDATPQPHIG*LCAPAL
Trigger: GAGGGCAGGTGCACATAGCCAACCAATGTGAGGTTG...AGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp GAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCAACCTCACATTGGTTaGCTATGTGCACCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: EQRHWASHRRMQEGPRCHQPHIG*LCAPAL
Trigger: GAGGGCAGGTGCACATAGCCAACCAATGTGAGGTTG...GTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGATCACCGTTCGTCTCTaGCAGGTGCAGAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMITVRL*QVQSEQ
Trigger: CTGCTCACTCTGCACCTGCCAGAGACGAACGGTGAT...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp ATACAAAACTCTCCAATAATGACTCTGCTCAGCTCAGGGGCAGCAGGAGTGGAGATAGCAGCCCTCTCCTaGGTCCCGGCTCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: IQNSPIMTLLSSGAAGVEIAALS*VPAPWQ
Trigger: CTGCCAAGGAGCCGGGACCCAGGAGAGGGCTGCTAT...CTCCACTCCTGCTGCCCCTGAGCTGAGCAGAGTCATTATTGGAGAGTTTTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp ATACAAAACTCTCCAATAATGACTCTGCTCAGCTCAGGGGCAGCAGGAGTGGAGGGCCCCCGACCCCACTaGACACTGTTTGCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: IQNSPIMTLLSSGAAGVEGPRPH*TLFAAV
Trigger: GACTGCTGCAAACAGTGTCCAGTGGGGTCGGGGGCC...CTCCACTCCTGCTGCCCCTGAGCTGAGCAGAGTCATTATTGGAGAGTTTTGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCAGCTCTGACTCTCTaGGAACCACTGCCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMPALTL*EPLPSK
Trigger: TTTGCTGGGCAGTGGTTCCCAGAGAGTCAGAGCTGG...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGATCCCAACAAGCCAGTaGCATTATGTACAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LGFPQENARRSSMPPLPQIPTSQ*HYVQEE
Trigger: TTCCTCCTGTACATAATGTCACTGGCTTGTTGGGAT...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCAGTGAGTGTCACAAGTaGCACATGCAGCTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATSECHK*HMQLFC
Trigger: GCAGAACAGCTGCATGTGGCACTTGTGACACTCACT...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGAGTTCTCGCAGTAGCTaGCCCTGGTGTAGAATCTGG +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMSSRSS*PWCRIW
Trigger: CCAGATTCTACACCAGGGGCAGCTACTGCGAGAACT...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000450923.5
CDS-3UTR CCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCGGGGTTGGGCACTCTaGTTTGATGTTCTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMRGWAL*FDVLAA
Trigger: AGCTGCAAGAACATCAAACCAGAGTGCCCAACCCCG...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGACAGGACACTGCCATTaGAGTCTGAGAAGCGGATCC +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMTGHCH*SLRSGS
Trigger: GGATCCGCTTCTCAGACTCCAATGGCAGTGTCCTGT...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp ATACAAAACTCTCCAATAATGACTCTGCTCAGCTCAGGGGCAGCAGGAGTGGAGTTAGTCCCCCACTCCTaGGTTCCAGCAGCCCTCGGA +
Preference number: 4 (lower is better)
Translates to: IQNSPIMTLLSSGAAGVELVPHS*VPAALG
Trigger: TCCGAGGGCTGCTGGAACCCAGGAGTGGGGGACTAA...CTCCACTCCTGCTGCCCCTGAGCTGAGCAGAGTCATTATTGGAGAGTTTTGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000450923.5
CDS-3UTR TCA 90 bp AGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCATCCCAACAAGCCAGTaGCATTATGTACAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: RHWASHRRMQEGPRCHPFIPTSQ*HYVQEE
Trigger: TTCCTCCTGTACATAATGTCACTGGCTTGTTGGGAT...GAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGAGTGAGTGTCACAAGTaGCACATGCAGCTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: RGAKALGFPQENARRSSMSECHK*HMQLFC
Trigger: GCAGAACAGCTGCATGTGGCACTTGTGACACTCACT...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp ATACAAAACTCTCCAATAATGACTCTGCTCAGCTCAGGGGCAGCAGGAGTGGAGTCATCAGGGAGGCCATaGCTTTTGCCAGGTGCCGCA +
Preference number: 4 (lower is better)
Translates to: IQNSPIMTLLSSGAAGVESSGRP*LLPGAA
Trigger: TGCGGCACCTGGCAAAAGGCATGGCCTCCCTGATGA...CTCCACTCCTGCTGCCCCTGAGCTGAGCAGAGTCATTATTGGAGAGTTTTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CCA 90 bp ATACAAAACTCTCCAATAATGACTCTGCTCAGCTCAGGGGCAGCAGGAGTGGAGCGCAGTAGCTGCCCCTaGTGTAGAATCTGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: IQNSPIMTLLSSGAAGVERSSCP*CRIWSL
Trigger: GAGGCTCCAGATTCTACACCAGGGGCAGCTACTGCG...CTCCACTCCTGCTGCCCCTGAGCTGAGCAGAGTCATTATTGGAGAGTTTTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000450923.5
CDS-3UTR TCA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCATCCCAACAAGCCAGTaGCATTATGTACAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: SKGTGLPTGECKKVLDATIPTSQ*HYVQEE
Trigger: TTCCTCCTGTACATAATGTCACTGGCTTGTTGGGAT...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp ATACAAAACTCTCCAATAATGACTCTGCTCAGCTCAGGGGCAGCAGGAGTGGAGCCCCACATCTGCAGGTaGTACAGCTCATCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: IQNSPIMTLLSSGAAGVEPHICR*YSSSLQ
Trigger: TTGGAGAGATGAGCTGTATCACCTGCAGATGTGGGG...CTCCACTCCTGCTGCCCCTGAGCTGAGCAGAGTCATTATTGGAGAGTTTTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR GCA 90 bp ATACAAAACTCTCCAATAATGACTCTGCTCAGCTCAGGGGCAGCAGGAGTGGAGGTCACAAGTGCCACATaGAGCTGTTCTGCCCTAAGG +
Preference number: 4 (lower is better)
Translates to: IQNSPIMTLLSSGAAGVEVTSAT*SCSALR
Trigger: CCTTAGGGCAGAACAGCTGCATGTGGCACTTGTGAC...CTCCACTCCTGCTGCCCCTGAGCTGAGCAGAGTCATTATTGGAGAGTTTTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR TCA 90 bp ATACAAAACTCTCCAATAATGACTCTGCTCAGCTCAGGGGCAGCAGGAGTGGAGATCCCAACAAGCCAGTaGCATTATGTACAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: IQNSPIMTLLSSGAAGVEIPTSQ*HYVQEE
Trigger: TTCCTCCTGTACATAATGTCACTGGCTTGTTGGGAT...CTCCACTCCTGCTGCCCCTGAGCTGAGCAGAGTCATTATTGGAGAGTTTTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS CCA 90 bp AGGCATAGACCTTCCCGCCGAAGGTGCAGCCTGCGGGGACGGGCTTaGCTGGAGGCCGCTGCCCAGCTCGCGCCGTGTGCCGCCCCGGGG +
Preference number: 5 (lower is better)
Translates to: RHRPSRRRCSLRGRA*LEAAAQLAPCAAPG
Trigger: CCCCGGGGCGGCACACGGCGCGAGCTGGGCAGCGGCCTCCAGCCAAGCCCGTCCCCGCAGGCTGCACCTTCGGCGGGAAGGTCTATGCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485883.5
CDS-3UTR CAA 90 bp GGCCGCCCAGGACCACCAGGTTTGGCGGGCGCTAGGGCCGGGAGACCAGGCACCCCAGGACCACCAGGTTaGGCGGGCGCTAGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: GRPGPPGLAGARAGRPGTPGPPG*AGARAG
Trigger: CCCGGCCCTAGCGCCCGCCAAACCTGGTGGTCCTGG...GGTGCCTGGTCTCCCGGCCCTAGCGCCCGCCAAACCTGGTGGTCCTGGGCGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS CCA 90 bp CCCCCTACCCGTGTGGCCGTCACCACGGGCCCGCTCCTCAGCGCCTaGCTCCCCGCGGTCGCTATAACTGCGATGCTCCGGGTCCCGCGG +
Preference number: 5 (lower is better)
Translates to: PPTRVAVTTGPLLSA*LPAVAITAMLRVPR
Trigger: CCGCGGGACCCGGAGCATCGCAGTTATAGCGACCGCGGGGAGCCAGGCGCTGAGGAGCGGGCCCGTGGTGACGGCCACACGGGTAGGGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459711.5
CDS-3UTR CAA 90 bp GGCCGCCCAGGACCACCAGGTTTGGCGGGCGCTAGGGCCGGGAGACCAGGCACCAGCTGCCTCTCCCCCTaGTGGAGCTGTGGTTCCCAG +
Preference number: 5 (lower is better)
Translates to: GRPGPPGLAGARAGRPGTSCLSP*WSCGSQ
Trigger: CTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCT...GGTGCCTGGTCTCCCGGCCCTAGCGCCCGCCAAACCTGGTGGTCCTGGGCGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS TCA 90 bp GACCCAGTGTGCCCTTCCAGGACCTCCTACCTGGCAGGTGCAGAGTaGGCAGAGCGGGTCGTAGTTGGGCGCCCAGCGAGCCCCGTGGGG +
Preference number: 5 (lower is better)
Translates to: DPVCPSRTSYLAGAE*AERVVVGRPASPVG
Trigger: CCCCACGGGGCTCGCTGGGCGCCCAACTACGACCCGCTCTGCTCACTCTGCACCTGCCAGGTAGGAGGTCCTGGAAGGGCACACTGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460627.5
CDS CCA 90 bp CGGCCCCGGCCGCCTCCAGGCGCAGTCCGCCAACCTCACATTGGTTaGCTATGTGCACCTGGGAGGAGAGGCCAACTGAGGCAGCGCTGG +
Preference number: 5 (lower is better)
Translates to: RPRPPPGAVRQPHIG*LCAPGRRGQLRQRW
Trigger: CCAGCGCTGCCTCAGTTGGCCTCTCCTCCCAGGTGCACATAGCCAACCAATGTGAGGTTGGCGGACTGCGCCTGGAGGCGGCCGGGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460627.5
ENST00000464833.1
CDS CCA 90 bp CCCTCGGCCCCGGCCGCCTCCAGGCGCAGTCCGCCAACCTCACATTaGTTGGCTATGTGCACCTGGGAGGAGAGGCCAACTGAGGCAGCG +
Preference number: 5 (lower is better)
Translates to: PSAPAASRRSPPTSH*LAMCTWEERPTEAA
Trigger: CGCTGCCTCAGTTGGCCTCTCCTCCCAGGTGCACATAGCCAACCAATGTGAGGTTGGCGGACTGCGCCTGGAGGCGGCCGGGGCCGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460627.5
ENST00000464833.1
CDS TCA 90 bp CCCCCGCCTCACCGTCGCAGCTCTTCCTGGCAGCAATGTGTCCACTaGTGCGCAGCCCTGGCCTGCCTGCCCACTCCAGGGCCATCTGCA +
Preference number: 5 (lower is better)
Translates to: PPPHRRSSSWQQCVH*CAALACLPTPGPSA
Trigger: TGCAGATGGCCCTGGAGTGGGCAGGCAGGCCAGGGCTGCGCATCAGTGGACACATTGCTGCCAGGAAGAGCTGCGACGGTGAGGCGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460627.5
CDS CCA 90 bp GGTTGGCTATGTGCACCTGGGAGGAGAGGCCAACTGAGGCAGCGCTaGGGCTCCCCCTCGCGTCTTTACCAGCGGCAGCTGGCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: GWLCAPGRRGQLRQR*GSPSRLYQRQLASQ
Trigger: CTGGCTGGCCAGCTGCCGCTGGTAAAGACGCGAGGGGGAGCCCCAGCGCTGCCTCAGTTGGCCTCTCCTCCCAGGTGCACATAGCCAACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460627.5
ENST00000464833.1
CDS-3UTR CAA 90 bp GAAGTCCGTGTGGCCGTCACCACGGGCCCGCTCCTCAGCGCCTGGCTCCCCGCGTCTGGTTTGATGTTCTaGCAGCTGACCCTGCCAGGG +
Preference number: 5 (lower is better)
Translates to: EVRVAVTTGPLLSAWLPASGLMF*QLTLPG
Trigger: CCCTGGCAGGGTCAGCTGCAAGAACATCAAACCAGA...CGCGGGGAGCCAGGCGCTGAGGAGCGGGCCCGTGGTGACGGCCACACGGACTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR CAA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTCTGGGTCCCGGCTCCTaGGCAGCCCTGGCAAGTCTC +
Preference number: 5 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGLGPGS*AALASL
Trigger: GAGACTTGCCAGGGCTGCCAAGGAGCCGGGACCCAG...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp GGCACAACGGGGTGCCACCGCGTACCCGCTGCCCGCCAGCTCCGGTCACCATCACATCCTCTTGGTCACTaGGCCCTCTGGCTGCTCCCT +
Preference number: 5 (lower is better)
Translates to: GTTGCHRVPAARQLRSPSHPLGH*ALWLLP
Trigger: AGGGAGCAGCCAGAGGGCCAAGTGACCAAGAGGATG...TGATGGTGACCGGAGCTGGCGGGCAGCGGGTACGCGGTGGCACCCCGTTGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS GCA 90 bp AGAGAAGACTCAGAACTTCACGCCCGGGGCTCTTTGCTCCCTACCTaGAGCCAGGGCCCGGTGCCGGATGAGAGGCCCCCAGACCTCCCC +
Preference number: 5 (lower is better)
Translates to: REDSELHARGSLLPT*SQGPVPDERPPDLP
Trigger: GGGGAGGTCTGGGGGCCTCTCATCCGGCACCGGGCCCTGGCTGCAGGTAGGGAGCAAAGAGCCCCGGGCGTGAAGTTCTGAGTCTTCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460627.5
CDS GCA 90 bp CGGCAGCTGGCCAGCCAGCAGGAGACACCTCGGCCCCCTGAGCGCTaGAGTGGCCCAGGAGGATGCCATTCGCTCCACAATCATCTCAGC +
Preference number: 5 (lower is better)
Translates to: RQLASQQETPRPPER*SGPGGCHSLHNHLS
Trigger: GCTGAGATGATTGTGGAGCGAATGGCATCCTCCTGGGCCACTGCAGCGCTCAGGGGGCCGAGGTGTCTCCTGCTGGCTGGCCAGCTGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460627.5
ENST00000464833.1
CDS GCA 90 bp ATCCCAGGACCCAGTGTGCCCTTCCAGGACCTCCTACCTGGCAGGTaGAGAGTGAGCAGAGCGGGTCGTAGTTGGGCGCCCAGCGAGCCC +
Preference number: 5 (lower is better)
Translates to: IPGPSVPFQDLLPGR*RVSRAGRSWAPSEP
Trigger: GGGCTCGCTGGGCGCCCAACTACGACCCGCTCTGCTCACTCTGCACCTGCCAGGTAGGAGGTCCTGGAAGGGCACACTGGGTCCTGGGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460627.5
CDS-3UTR CAA 90 bp GCGCAGCAGCGAGACTCGGGCTCGTGCCACCGCCTGCGACCTCGGCCCTGTCAGGAGTGTCGGGGGCCCTaGGTGCTGAGTGAAGATAAA +
Preference number: 5 (lower is better)
Translates to: AQQRDSGSCHRLRPRPCQECRGP*VLSEDK
Trigger: TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTC...CTGACAGGGCCGAGGTCGCAGGCGGTGGCACGAGCCCGAGTCTCGCTGCTGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS CCA 90 bp CCCTCTGGCTGCTCCCTAAGAGCCTTCGGCTTCTTTCTCCAGCTCTaGATCAGTTCTGGTCTCTGGGGGCCGCCGGTGGGCCGTGCAGCG +
Preference number: 5 (lower is better)
Translates to: PSGCSLRAFGFFLQL*ISSGLWGPPVGRAA
Trigger: CGCTGCACGGCCCACCGGCGGCCCCCAGAGACCAGAACTGATCCAGAGCTGGAGAAAGAAGCCGAAGGCTCTTAGGGAGCAGCCAGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450923.5
CDS CCA 90 bp GGGACGGGAGGAAGATGGCCTGAGCACTGTCAAACGCCGCTTTGGTaGCCCAGCCTCAACCACAACCCCGCTGTTCGCCAGCCCCCTACC +
Preference number: 5 (lower is better)
Translates to: GTGGRWPEHCQTPLW*PSLNHNPAVRQPPT
Trigger: GGTAGGGGGCTGGCGAACAGCGGGGTTGTGGTTGAGGCTGGGCCACCAAAGCGGCGTTTGACAGTGCTCAGGCCATCTTCCTCCCGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459711.5
CDS-3UTR CAA 90 bp CGAAGGACAGGCCGCTCGGCTGCCGCTCCGAACTGCTGCGCTCCTGGGGGCAGGGTTGGGCACTCTGGTTaGATGTTCTTGCAGCTGACC +
Preference number: 5 (lower is better)
Translates to: RRTGRSAAAPNCCAPGGRVGHSG*MFLQLT
Trigger: GGTCAGCTGCAAGAACATCAAACCAGAGTGCCCAAC...CCTGCCCCCAGGAGCGCAGCAGTTCGGAGCGGCAGCCGAGCGGCCTGTCCTTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR CAA 90 bp CAGCGCCACGAAGTCCGTGTGGCCGTCACCACGGGCCCGCTCCTCAGCGCCTGGAACAGGACACTGCCATaGGAGTCTGAGAAGCGGATC +
Preference number: 5 (lower is better)
Translates to: QRHEVRVAVTTGPLLSAWNRTLP*ESEKRI
Trigger: GATCCGCTTCTCAGACTCCAATGGCAGTGTCCTGTT...CCAGGCGCTGAGGAGCGGGCCCGTGGTGACGGCCACACGGACTTCGTGGCGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR CAA 90 bp TCGGGCACCCAGCCCAGGGCAGATACCCACGGCCGTGTGTCCTCCTGGCTGGAGCCACCACCTCACTGCTaGTCCCTACCACTTGCACCT +
Preference number: 5 (lower is better)
Translates to: SGTQPRADTHGRVSSWLEPPPHC*SLPLAP
Trigger: AGGTGCAAGTGGTAGGGACAAGCAGTGAGGTGGTGG...CTCCAGCCAGGAGGACACACGGCCGTGGGTATCTGCCCTGGGCTGGGTGCCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CAA 90 bp CACCCTGGGCCTCTGAGCCATAGAATCCCTTCAGCAGCCGCCGAGGCCCTGGCGCCGTCTGGGAAGTCCTaGGTGCCCACGTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: HPGPLSHRIPSAAAEALAPSGKS*VPTFRK
Trigger: CTTCCTGAACGTGGGCACCAAGGACTTCCCAGACGG...CGCCAGGGCCTCGGCGGCTGCTGAAGGGATTCTATGGCTCAGAGGCCCAGGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CAA 90 bp TCAGGGGCAGCAGGAGTGGAGTGTCGGGGGCCCTTGGTGCTGAGTGAAGATAAACCAGGACCACCAGGTTaGGCGGGCGCTAGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: SGAAGVECRGPLVLSEDKPGPPG*AGARAG
Trigger: CCCGGCCCTAGCGCCCGCCAAACCTGGTGGTCCTGG...TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGCTGCCTCTCCCCCTaGTGGAGCTGTGGTTCCCAG +
Preference number: 5 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGSCLSP*WSCGSQ
Trigger: CTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCT...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp GGCACAACGGGGTGCCACCGCGTACCCGCTGCCCGCCAGCTCCGGTCACCATCAGAGTGTCGGGGGCCCTaGGTGCTGAGTGAAGATAAA +
Preference number: 5 (lower is better)
Translates to: GTTGCHRVPAARQLRSPSECRGP*VLSEDK
Trigger: TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTC...TGATGGTGACCGGAGCTGGCGGGCAGCGGGTACGCGGTGGCACCCCGTTGTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS GCA 90 bp TCCTGGGTGATAGAGAAGACTCAGAACTTCACGCCCGGGGCTCTTTaGTCCCTACCTGCAGCCAGGGCCCGGTGCCGGATGAGAGGCCCC +
Preference number: 5 (lower is better)
Translates to: SWVIEKTQNFTPGAL*SLPAARARCRMRGP
Trigger: GGGGCCTCTCATCCGGCACCGGGCCCTGGCTGCAGGTAGGGAGCAAAGAGCCCCGGGCGTGAAGTTCTGAGTCTTCTCTATCACCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460627.5
CDS CCA 90 bp CTCGGCCCTGTCAGCAGCGCCACGAAGTCTGGGACGGGAGGAAGATaGCCTGAGCACTGTCAAACGCCGCTTTGGTGGCCCAGCCTCAAC +
Preference number: 5 (lower is better)
Translates to: LGPVSSATKSGTGGR*PEHCQTPLWWPSLN
Trigger: GTTGAGGCTGGGCCACCAAAGCGGCGTTTGACAGTGCTCAGGCCATCTTCCTCCCGTCCCAGACTTCGTGGCGCTGCTGACAGGGCCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459711.5
CDS-3UTR CAA 90 bp ACTGCGATGCTCCGGGTCCCGCGGATACTCGAAGGACAGGCCGCTCGGCTGCCGTCTGGTTTGATGTTCTaGCAGCTGACCCTGCCAGGG +
Preference number: 5 (lower is better)
Translates to: TAMLRVPRILEGQAARLPSGLMF*QLTLPG
Trigger: CCCTGGCAGGGTCAGCTGCAAGAACATCAAACCAGA...CGGCAGCCGAGCGGCCTGTCCTTCGAGTATCCGCGGGACCCGGAGCATCGCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR CAA 90 bp GAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCAGGACCACCAGGTTaGGCGGGCGCTAGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: EQRHWASHRRMQEGPRCHPGPPG*AGARAG
Trigger: CCCGGCCCTAGCGCCCGCCAAACCTGGTGGTCCTGG...GTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp AAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTCCAGGACCACCAGGTTaGGCGGGCGCTAGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: KGTGLPTGECKKVLDATPPGPPG*AGARAG
Trigger: CCCGGCCCTAGCGCCCGCCAAACCTGGTGGTCCTGG...AGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGATCGAAGAAGCATGTGTaGGGGTCTCGGGGCCGCCCA +
Preference number: 5 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGSKKHV*GSRGRP
Trigger: TGGGCGGCCCCGAGACCCCAACACATGCTTCTTCGA...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGCTGGGTCCCGGCTCCTaGGCAGCCCTGGCAAGTCTC +
Preference number: 5 (lower is better)
Translates to: LGFPQENARRSSMPPLPQLGPGS*AALASL
Trigger: GAGACTTGCCAGGGCTGCCAAGGAGCCGGGACCCAG...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp GCACCCGTCTGGACTGGGATCAGGGCATCAGCCCCACAAAGGACACTTTGCAGGCTGGGTCCCGGCTCCTaGGCAGCCCTGGCAAGTCTC +
Preference number: 5 (lower is better)
Translates to: APVWTGIRASAPQRTLCRLGPGS*AALASL
Trigger: GAGACTTGCCAGGGCTGCCAAGGAGCCGGGACCCAG...CCTGCAAAGTGTCCTTTGTGGGGCTGATGCCCTGATCCCAGTCCAGACGGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CAA 90 bp GGAGATAGAGAAGCGGAGGCTAGAGCGCAGCAGCGAGACTCGGGCTCGTGCCACTCAGGCCCCATCCTCTaGGTCACTTGGCCCTCTGGC +
Preference number: 5 (lower is better)
Translates to: GDREAEARAQQRDSGSCHSGPIL*VTWPSG
Trigger: GCCAGAGGGCCAAGTGACCAAGAGGATGGGGCCTGA...GTGGCACGAGCCCGAGTCTCGCTGCTGCGCTCTAGCCTCCGCTTCTCTATCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS TCA 90 bp AACCTCACATTGGTTGGCTATGTGCACCTGGGAGGAGAGGCCAACTaGGGCAGCGCTGGGGCTCCCCCTCGCGTCTTTACCAGCGGCAGC +
Preference number: 5 (lower is better)
Translates to: NLTLVGYVHLGGEAN*GSAGAPPRVFTSGS
Trigger: GCTGCCGCTGGTAAAGACGCGAGGGGGAGCCCCAGCGCTGCCTCAGTTGGCCTCTCCTCCCAGGTGCACATAGCCAACCAATGTGAGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460627.5
ENST00000464833.1
CDS CCA 90 bp AGCCGCAGAGACAACCGAGGCACTGCCCGCCACACCCCACAGACCTaGAGCAGAGAGACAAGAAGGCCCTACGCTCAGACACTGTGCAGG +
Preference number: 5 (lower is better)
Translates to: SRRDNRGTARHTPQT*SRETRRPYAQTLCR
Trigger: CCTGCACAGTGTCTGAGCGTAGGGCCTTCTTGTCTCTCTGCTCCAGGTCTGTGGGGTGTGGCGGGCAGTGCCTCGGTTGTCTCTGCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460627.5
ENST00000461120.1
CDS-3UTR CAA 90 bp TGCGATGCTCCGGGTCCCGCGGATACTCGAAGGACAGGCCGCTCGGCTGCCGCTGTTGGGCACTCTGGTTaGATGTTCTTGCAGCTGACC +
Preference number: 5 (lower is better)
Translates to: CDAPGPADTRRTGRSAAAVGHSG*MFLQLT
Trigger: GGTCAGCTGCAAGAACATCAAACCAGAGTGCCCAAC...AGCGGCAGCCGAGCGGCCTGTCCTTCGAGTATCCGCGGGACCCGGAGCATCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356534.7
ENST00000448472.5
CDS-3UTR CAA 90 bp GGGGTGCCACCGCGTACCCGCTGCCCGCCAGCTCCGGTCACCATCAAAATAGCACCACCACCTCACTGCTaGTCCCTACCACTTGCACCT +
Preference number: 5 (lower is better)
Translates to: GVPPRTRCPPAPVTIKIAPPPHC*SLPLAP
Trigger: AGGTGCAAGTGGTAGGGACAAGCAGTGAGGTGGTGG...TGCTATTTTGATGGTGACCGGAGCTGGCGGGCAGCGGGTACGCGGTGGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CAA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGACCTCTGGGGCTACCCTaGGTGGTGATCATCAGGGAG +
Preference number: 5 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGPLGLP*VVIIRE
Trigger: CTCCCTGATGATCACCACCAAGGGTAGCCCCAGAGG...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp ATTGGTTGGCTATGTGCACCTGCCCTCGGAGCTCCCCTCTGGGGCTACCCTTGGTCGAAGAAGCATGTGTaGGGGTCTCGGGGCCGCCCA +
Preference number: 5 (lower is better)
Translates to: IGWLCAPALGAPLWGYPWSKKHV*GSRGRP
Trigger: TGGGCGGCCCCGAGACCCCAACACATGCTTCTTCGA...CCAAGGGTAGCCCCAGAGGGGAGCTCCGAGGGCAGGTGCACATAGCCAACCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CAA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGCCCACTGGACACTGTTaGCAGCAGTCGGTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVPTGHC*QQSVGL
Trigger: CAACCCCACCGACTGCTGCAAACAGTGTCCAGTGGG...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp GGTGGTGATCATCAGGGAGGCCATGCCTTTTGCCAGGTGCCGCAGCAGTTCCGGTCAGGCCCCATCCTCTaGGTCACTTGGCCCTCTGGC +
Preference number: 5 (lower is better)
Translates to: GGDHQGGHAFCQVPQQFRSGPIL*VTWPSG
Trigger: GCCAGAGGGCCAAGTGACCAAGAGGATGGGGCCTGA...CCGGAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTCCCTGATGATCACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CAA 90 bp ATCATCAGGGAGGCCATGCCTTTTGCCAGGTGCCGCAGCAGTTCCGGCTCCAGGAGCTGCCTCTCCCCCTaGTGGAGCTGTGGTTCCCAG +
Preference number: 5 (lower is better)
Translates to: IIREAMPFARCRSSSGSRSCLSP*WSCGSQ
Trigger: CTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCT...CCTGGAGCCGGAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTCCCTGATGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS TCA 90 bp AGATACCCACGGCCTGATAGATCAGGGAGCCATTTCCTAGCAGCGTaGGGCTGGCTGAGCCGGCAGCACCCGTCTGGACTGGGATCAGGG +
Preference number: 5 (lower is better)
Translates to: RYPRPDRSGSHFLAA*GWLSRQHPSGLGSG
Trigger: CCCTGATCCCAGTCCAGACGGGTGCTGCCGGCTCAGCCAGCCTCACGCTGCTAGGAAATGGCTCCCTGATCTATCAGGCCGTGGGTATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348986.3
CDS TCA 90 bp CCCTGTCAGCAGCGCCACGAAGTCTGGGACGGGAGGAAGATGGCCTaGGCACTGTCAAACGCCGCTTTGGTGGCCCAGCCTCAACCACAA +
Preference number: 5 (lower is better)
Translates to: PCQQRHEVWDGRKMA*ALSNAALVAQPQPQ
Trigger: TTGTGGTTGAGGCTGGGCCACCAAAGCGGCGTTTGACAGTGCTCAGGCCATCTTCCTCCCGTCCCAGACTTCGTGGCGCTGCTGACAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459711.5
CDS CCA 90 bp CCACTGAGGAAGCTGCGTGACCCTAGACAAGCTACTTCATCTCTCTaGGCCTCAAGGTCCCGCCTCGCAGGCGCACAGCACGCAGCGCAT +
Preference number: 5 (lower is better)
Translates to: PLRKLRDPRQATSSL*ASRSRLAGAQHAAH
Trigger: ATGCGCTGCGTGCTGTGCGCCTGCGAGGCGGGACCTTGAGGCCCAGAGAGATGAAGTAGCTTGTCTAGGGTCACGCAGCTTCCTCAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356534.7
CDS CCA 90 bp CCACTGAGGAAGCTGCGTGACCCTAGACAAGCTACTTCATCTCTCTaGGCCTCAAGGTCCCTGTCGCCTCGCAGGCGCACAGCACGCAGC +
Preference number: 5 (lower is better)
Translates to: PLRKLRDPRQATSSL*ASRSLSPRRRTARS
Trigger: GCTGCGTGCTGTGCGCCTGCGAGGCGACAGGGACCTTGAGGCCCAGAGAGATGAAGTAGCTTGTCTAGGGTCACGCAGCTTCCTCAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR CAA 90 bp GGGGTGCCACCGCGTACCCGCTGCCCGCCAGCTCCGGTCACCATCAAAATAGCACCCACAAAGGACACTTaGCAGGACGTCGCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: GVPPRTRCPPAPVTIKIAPTKDT*QDVAAL
Trigger: AAGAGCTGCGACGTCCTGCAAAGTGTCCTTTGTGGG...TGCTATTTTGATGGTGACCGGAGCTGGCGGGCAGCGGGTACGCGGTGGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CAA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTCCCACAAAGGACACTTaGCAGGACGTCGCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGPTKDT*QDVAAL
Trigger: AAGAGCTGCGACGTCCTGCAAAGTGTCCTTTGTGGG...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGACCACCACCTCACTGCTaGTCCCTACCACTTGCACCT +
Preference number: 5 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGPPPHC*SLPLAP
Trigger: AGGTGCAAGTGGTAGGGACAAGCAGTGAGGTGGTGG...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000204604.5
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp GCGCTGATCCCTCCGCTGAGGCTTGGTCTCCAGTGTCATGGCCACCACCTCACTCCTCTGGGGCTACCCTaGGTGGTGATCATCAGGGAG +
Preference number: 5 (lower is better)
Translates to: ALIPPLRLGLQCHGHHLTPLGLP*VVIIRE
Trigger: CTCCCTGATGATCACCACCAAGGGTAGCCCCAGAGG...AGTGAGGTGGTGGCCATGACACTGGAGACCAAGCCTCAGCGGAGGGATCAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CAA 90 bp CGCAGAGACAACCGAGGCACTGCCCGCCACACCCCACAGACCAGGCCATCTTGGTCCGCCAACCTCACATaGGTTGGCTATGTGCACCTG +
Preference number: 5 (lower is better)
Translates to: RRDNRGTARHTPQTRPSWSANLT*VGYVHL
Trigger: CAGGTGCACATAGCCAACCAATGTGAGGTTGGCGGA...CCAAGATGGCCTGGTCTGTGGGGTGTGGCGGGCAGTGCCTCGGTTGTCTCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR CAA 90 bp AAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTCTGGGTCCCGGCTCCTaGGCAGCCCTGGCAAGTCTC +
Preference number: 5 (lower is better)
Translates to: KGTGLPTGECKKVLDATPLGPGS*AALASL
Trigger: GAGACTTGCCAGGGCTGCCAAGGAGCCGGGACCCAG...AGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCTGGGTCCCGGCTCCTaGGCAGCCCTGGCAAGTCTC +
Preference number: 5 (lower is better)
Translates to: SKGTGLPTGECKKVLDATLGPGS*AALASL
Trigger: GAGACTTGCCAGGGCTGCCAAGGAGCCGGGACCCAG...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp GCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCAGCAGTCGGTGGGGTaGACACGCACAGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: AKALGFPQENARRSSMPPQQSVG*TRTGWA
Trigger: TGCCCAGCCTGTGCGTGTCAACCCCACCGACTGCTG...GGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp CCCCCGAAGCTCTCCGTCTGGGAAGTCCTTGGTGCCCACGTTCAGGAAGAGCTCCCCACTGGACACTGTTaGCAGCAGTCGGTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: PPKLSVWEVLGAHVQEELPTGHC*QQSVGL
Trigger: CAACCCCACCGACTGCTGCAAACAGTGTCCAGTGGG...GAGCTCTTCCTGAACGTGGGCACCAAGGACTTCCCAGACGGAGAGCTTCGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CAA 90 bp ATTGGTTGGCTATGTGCACCTGCCCTCGGAGCTCCCCTCTGGGGCTACCCTTGGCATCCTCTTGGTCACTaGGCCCTCTGGCTGCTCCCT +
Preference number: 5 (lower is better)
Translates to: IGWLCAPALGAPLWGYPWHPLGH*ALWLLP
Trigger: AGGGAGCAGCCAGAGGGCCAAGTGACCAAGAGGATG...CCAAGGGTAGCCCCAGAGGGGAGCTCCGAGGGCAGGTGCACATAGCCAACCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CAA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGTCAGGCCCCATCCTCTaGGTCACTTGGCCCTCTGGC +
Preference number: 5 (lower is better)
Translates to: LGFPQENARRSSMPPLPQSGPIL*VTWPSG
Trigger: GCCAGAGGGCCAAGTGACCAAGAGGATGGGGCCTGA...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTGAGTGTCGGGGGCCCTaGGTGCTGAGTGAAGATAAA +
Preference number: 5 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGECRGP*VLSEDK
Trigger: TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTC...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS TCA 90 bp GGCAGCACCTCAGCAAAGCCTGGTTCCTGGGGACAGAGCAGGGTGTaGTGGGCAATAGCAAGAGGCCAAGACAGGTGGCAGCGAGAGCCA +
Preference number: 5 (lower is better)
Translates to: GSTSAKPGSWGQSRV*WAIARGQDRWQREP
Trigger: TGGCTCTCGCTGCCACCTGTCTTGGCCTCTTGCTATTGCCCATCACACCCTGCTCTGTCCCCAGGAACCAGGCTTTGCTGAGGTGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460627.5
ENST00000470150.5
CDS-3UTR CAA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGTCTGGTTTGATGTTCTaGCAGCTGACCCTGCCAGGG +
Preference number: 5 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVSGLMF*QLTLPG
Trigger: CCCTGGCAGGGTCAGCTGCAAGAACATCAAACCAGA...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp GGGGTGCCACCGCGTACCCGCTGCCCGCCAGCTCCGGTCACCATCAAAATAGCAGTTGGGCACTCTGGTTaGATGTTCTTGCAGCTGACC +
Preference number: 5 (lower is better)
Translates to: GVPPRTRCPPAPVTIKIAVGHSG*MFLQLT
Trigger: GGTCAGCTGCAAGAACATCAAACCAGAGTGCCCAAC...TGCTATTTTGATGGTGACCGGAGCTGGCGGGCAGCGGGTACGCGGTGGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CAA 90 bp GGGGTGCCACCGCGTACCCGCTGCCCGCCAGCTCCGGTCACCATCAAAATAGCAAACAGGACACTGCCATaGGAGTCTGAGAAGCGGATC +
Preference number: 5 (lower is better)
Translates to: GVPPRTRCPPAPVTIKIANRTLP*ESEKRI
Trigger: GATCCGCTTCTCAGACTCCAATGGCAGTGTCCTGTT...TGCTATTTTGATGGTGACCGGAGCTGGCGGGCAGCGGGTACGCGGTGGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CAA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGACCCACAAAGGACACTTaGCAGGACGTCGCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGPTKDT*QDVAAL
Trigger: AAGAGCTGCGACGTCCTGCAAAGTGTCCTTTGTGGG...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp CAGAGACAACCGAGGCACTGCCCGCCACACCCCACAGACCAGGCCATCTTGGGTCCCACAAAGGACACTTaGCAGGACGTCGCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: QRQPRHCPPHPTDQAILGPTKDT*QDVAAL
Trigger: AAGAGCTGCGACGTCCTGCAAAGTGTCCTTTGTGGG...ACCCAAGATGGCCTGGTCTGTGGGGTGTGGCGGGCAGTGCCTCGGTTGTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448472.5
CDS-3UTR CAA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTGCTTGTCCCTACCACTaGCACCTGATAGATCAGGGA +
Preference number: 5 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGACPYH*HLIDQG
Trigger: TCCCTGATCTATCAGGTGCAAGTGGTAGGGACAAGC...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000204604.5
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp GCACCCGTCTGGACTGGGATCAGGGCATCAGCCCCACAAAGGACACTTTGCAGGCCGTCTGGGAAGTCCTaGGTGCCCACGTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: APVWTGIRASAPQRTLCRPSGKS*VPTFRK
Trigger: CTTCCTGAACGTGGGCACCAAGGACTTCCCAGACGG...CCTGCAAAGTGTCCTTTGTGGGGCTGATGCCCTGATCCCAGTCCAGACGGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CAA 90 bp CAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGGGGTGGGATCCGCCAACCTCACATaGGTTGGCTATGTGCACCTG +
Preference number: 5 (lower is better)
Translates to: QLPLPLVELWFPEVVGVGSANLT*VGYVHL
Trigger: CAGGTGCACATAGCCAACCAATGTGAGGTTGGCGGA...TCCCACCCCCACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp AGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCTCGAAGAAGCATGTGTaGGGGTCTCGGGGCCGCCCA +
Preference number: 5 (lower is better)
Translates to: RHWASHRRMQEGPRCHPFSKKHV*GSRGRP
Trigger: TGGGCGGCCCCGAGACCCCAACACATGCTTCTTCGA...GAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp CACGTTCAGGAAGAGCTCATTCTGCAGCAGCATATGAGCCCCTCGGGCACCCAGTCGAAGAAGCATGTGTaGGGGTCTCGGGGCCGCCCA +
Preference number: 5 (lower is better)
Translates to: HVQEELILQQHMSPSGTQSKKHV*GSRGRP
Trigger: TGGGCGGCCCCGAGACCCCAACACATGCTTCTTCGA...CTGGGTGCCCGAGGGGCTCATATGCTGCTGCAGAATGAGCTCTTCCTGAACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CAA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCAGCAGTCGGTGGGGTaGACACGCACAGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: SKGTGLPTGECKKVLDATQQSVG*TRTGWA
Trigger: TGCCCAGCCTGTGCGTGTCAACCCCACCGACTGCTG...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp AAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTCAGCAGTCGGTGGGGTaGACACGCACAGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: KGTGLPTGECKKVLDATPQQSVG*TRTGWA
Trigger: TGCCCAGCCTGTGCGTGTCAACCCCACCGACTGCTG...AGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp AAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCAGCAGTCGGTGGGGTaGACACGCACAGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: KALGFPQENARRSSMPPLQQSVG*TRTGWA
Trigger: TGCCCAGCCTGTGCGTGTCAACCCCACCGACTGCTG...AAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp CTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCCCAGCATCCTCTTGGTCACTaGGCCCTCTGGCTGCTCCCT +
Preference number: 5 (lower is better)
Translates to: LGFPQENARRSSMPPLPQHPLGH*ALWLLP
Trigger: AGGGAGCAGCCAGAGGGCCAAGTGACCAAGAGGATG...CTGGGGAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp AGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCAGCTGCCTCTCCCCCTaGTGGAGCTGTGGTTCCCAG +
Preference number: 5 (lower is better)
Translates to: RHWASHRRMQEGPRCHPFSCLSP*WSCGSQ
Trigger: CTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCT...GAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS TCA 90 bp GCAGCGAGAGCCAGATCCCCACTCACCTGGGCTGAGACATTGGCCTaGAGTTCTCGCAGTAGCTGCCCCTGGTGTAGAATCTGGAGCCTC +
Preference number: 5 (lower is better)
Translates to: AARARSPLTWAETLA*SSRSSCPWCRIWSL
Trigger: GAGGCTCCAGATTCTACACCAGGGGCAGCTACTGCGAGAACTTCAGGCCAATGTCTCAGCCCAGGTGAGTGGGGATCTGGCTCTCGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460627.5
ENST00000470150.5
CDS GCA 90 bp GACCATCTCAAGAACCATCCCCAGCCCCTCTGCGGAACCCAGGCATaGCAGCCAACTGCCACGCTATCCTCTGCCTCTCCAGGTCTCTTT +
Preference number: 5 (lower is better)
Translates to: DHLKNHPQPLCGTQA*QPTATLSSASPGLF
Trigger: AAAGAGACCTGGAGAGGCAGAGGATAGCGTGGCAGTTGGCTGGCATGCCTGGGTTCCGCAGAGGGGCTGGGGATGGTTCTTGAGATGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470150.5
CDS CCA 90 bp AGCATGCTCTCGGCACAGTGCCCAGACTGGGCAAGTGCTCATAAATaGCATCATCTCACCAGGCCATCTTGGGTGGGGGCTGCAGGGTGC +
Preference number: 5 (lower is better)
Translates to: SMLSAQCPDWASAHK*HHLTRPSWVGAAGC
Trigger: GCACCCTGCAGCCCCCACCCAAGATGGCCTGGTGAGATGATGCCATTTATGAGCACTTGCCCAGTCTGGGCACTGTGCCGAGAGCATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460627.5
ENST00000482014.1
CDS-3UTR CAA 90 bp CCCCCGAAGCTCTCCGTCTGGGAAGTCCTTGGTGCCCACGTTCAGGAAGAGCTCTCTGGTTTGATGTTCTaGCAGCTGACCCTGCCAGGG +
Preference number: 5 (lower is better)
Translates to: PPKLSVWEVLGAHVQEELSGLMF*QLTLPG
Trigger: CCCTGGCAGGGTCAGCTGCAAGAACATCAAACCAGA...GAGCTCTTCCTGAACGTGGGCACCAAGGACTTCCCAGACGGAGAGCTTCGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CAA 90 bp GGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTAGTGGTTGGGCACTCTGGTTaGATGTTCTTGCAGCTGACC +
Preference number: 5 (lower is better)
Translates to: GLAQLPLPLVELWFPEVVVGHSG*MFLQLT
Trigger: GGTCAGCTGCAAGAACATCAAACCAGAGTGCCCAAC...CACTACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp TCAGGGGCAGCAGGAGTGGAGTGTCGGGGGCCCTTGGTGCTGAGTGAAGATAAACCGTCTGGGAAGTCCTaGGTGCCCACGTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: SGAAGVECRGPLVLSEDKPSGKS*VPTFRK
Trigger: CTTCCTGAACGTGGGCACCAAGGACTTCCCAGACGG...TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp ATCATCAGGGAGGCCATGCCTTTTGCCAGGTGCCGCAGCAGTTCCGGCTCCAGGTCCGCCAACCTCACATaGGTTGGCTATGTGCACCTG +
Preference number: 5 (lower is better)
Translates to: IIREAMPFARCRSSSGSRSANLT*VGYVHL
Trigger: CAGGTGCACATAGCCAACCAATGTGAGGTTGGCGGA...CCTGGAGCCGGAACTGCTGCGGCACCTGGCAAAAGGCATGGCCTCCCTGATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CAA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCAGCAGTCGGTGGGGTaGACACGCACAGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: RGAKALGFPQENARRSSMQQSVG*TRTGWA
Trigger: TGCCCAGCCTGTGCGTGTCAACCCCACCGACTGCTG...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp TCAGGGGCAGCAGGAGTGGAGTGTCGGGGGCCCTTGGTGCTGAGTGAAGATAAACCCACTGGACACTGTTaGCAGCAGTCGGTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: SGAAGVECRGPLVLSEDKPTGHC*QQSVGL
Trigger: CAACCCCACCGACTGCTGCAAACAGTGTCCAGTGGG...TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp TCAGGGGCAGCAGGAGTGGAGTGTCGGGGGCCCTTGGTGCTGAGTGAAGATAAACATCCTCTTGGTCACTaGGCCCTCTGGCTGCTCCCT +
Preference number: 5 (lower is better)
Translates to: SGAAGVECRGPLVLSEDKHPLGH*ALWLLP
Trigger: AGGGAGCAGCCAGAGGGCCAAGTGACCAAGAGGATG...TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCAGCTGCCTCTCCCCCTaGTGGAGCTGTGGTTCCCAG +
Preference number: 5 (lower is better)
Translates to: SKGTGLPTGECKKVLDATSCLSP*WSCGSQ
Trigger: CTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCT...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS CCA 90 bp CGCAGTAGCTGCCCCTGGTGTAGAATCTGGAGCCTCAAGGGAACCTaGGTTAGTCCTGCAAGGCCGCACATGTGGGCCTTTCTGAGACAG +
Preference number: 5 (lower is better)
Translates to: RSSCPWCRIWSLKGT*VSPARPHMWAFLRQ
Trigger: CTGTCTCAGAAAGGCCCACATGTGCGGCCTTGCAGGACTAACCCAGGTTCCCTTGAGGCTCCAGATTCTACACCAGGGGCAGCTACTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460627.5
ENST00000461120.1
ENST00000470150.5
CDS CCA 90 bp AGGTGGCAGCGAGAGCCAGATCCCCACTCACCTGGGCTGAGACATTaGCCTGAAGTTCTCGCAGTAGCTGCCCCTGGTGTAGAATCTGGA +
Preference number: 5 (lower is better)
Translates to: RWQREPDPHSPGLRH*PEVLAVAAPGVESG
Trigger: TCCAGATTCTACACCAGGGGCAGCTACTGCGAGAACTTCAGGCCAATGTCTCAGCCCAGGTGAGTGGGGATCTGGCTCTCGCTGCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460627.5
ENST00000470150.5
CDS CCA 90 bp GTCCATCTCCTGGACTGTCAGGTTGGGCAGCACCTCAGCAAAGCCTaGTTCCTGGGGACAGAGCAGGGTGTGATGGGCAATAGCAAGAGG +
Preference number: 5 (lower is better)
Translates to: VHLLDCQVGQHLSKA*FLGTEQGVMGNSKR
Trigger: CCTCTTGCTATTGCCCATCACACCCTGCTCTGTCCCCAGGAACCAGGCTTTGCTGAGGTGCTGCCCAACCTGACAGTCCAGGAGATGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460627.5
ENST00000470150.5
CDS-3UTR CAA 90 bp GCGCTGATCCCTCCGCTGAGGCTTGGTCTCCAGTGTCATGGCCACCACCTCACTAACAGGACACTGCCATaGGAGTCTGAGAAGCGGATC +
Preference number: 5 (lower is better)
Translates to: ALIPPLRLGLQCHGHHLTNRTLP*ESEKRI
Trigger: GATCCGCTTCTCAGACTCCAATGGCAGTGTCCTGTT...AGTGAGGTGGTGGCCATGACACTGGAGACCAAGCCTCAGCGGAGGGATCAGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CAA 90 bp AAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCGTCTGGGAAGTCCTaGGTGCCCACGTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: KALGFPQENARRSSMPPLPSGKS*VPTFRK
Trigger: CTTCCTGAACGTGGGCACCAAGGACTTCCCAGACGG...AAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp GAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCTCTGGGGCTACCCTaGGTGGTGATCATCAGGGAG +
Preference number: 5 (lower is better)
Translates to: EQRHWASHRRMQEGPRCHPLGLP*VVIIRE
Trigger: CTCCCTGATGATCACCACCAAGGGTAGCCCCAGAGG...GTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGTCGAAGAAGCATGTGTaGGGGTCTCGGGGCCGCCCA +
Preference number: 5 (lower is better)
Translates to: RGAKALGFPQENARRSSMSKKHV*GSRGRP
Trigger: TGGGCGGCCCCGAGACCCCAACACATGCTTCTTCGA...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp CCTCGGTCTGGCCCAGCTGCCTCTCCCCCTTGTGGAGCTGTGGTTCCCAGAGGTCAAGTCTCTGACATCTaGTTTCTCAGGGCAAACAGG +
Preference number: 5 (lower is better)
Translates to: PRSGPAASPPCGAVVPRGQVSDI*FLRANR
Trigger: CCTGTTTGCCCTGAGAAACAAGATGTCAGAGACTTG...ACCTCTGGGAACCACAGCTCCACAAGGGGGAGAGGCAGCTGGGCCAGACCGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp GAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCACTGGACACTGTTaGCAGCAGTCGGTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: EQRHWASHRRMQEGPRCHPTGHC*QQSVGL
Trigger: CAACCCCACCGACTGCTGCAAACAGTGTCCAGTGGG...GTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp AAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTCATCCTCTTGGTCACTaGGCCCTCTGGCTGCTCCCT +
Preference number: 5 (lower is better)
Translates to: KGTGLPTGECKKVLDATPHPLGH*ALWLLP
Trigger: AGGGAGCAGCCAGAGGGCCAAGTGACCAAGAGGATG...AGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS CCA 90 bp CCTCAAACCCAGCATTCCCAGCTCCCCAGCACACATTCCACGAGCTaGAAGACACTGTCCATAGGTCCAGGGCCTGGAGAGCAGCAAGTT +
Preference number: 5 (lower is better)
Translates to: PQTQHSQLPSTHSTS*KTLSIGPGPGEQQV
Trigger: AACTTGCTGCTCTCCAGGCCCTGGACCTATGGACAGTGTCTTCCAGCTCGTGGAATGTGTGCTGGGGAGCTGGGAATGCTGGGTTTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464833.1
CDS-3UTR CAA 90 bp GAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCACCACCTCACTGCTaGTCCCTACCACTTGCACCT +
Preference number: 5 (lower is better)
Translates to: EQRHWASHRRMQEGPRCHPPPHC*SLPLAP
Trigger: AGGTGCAAGTGGTAGGGACAAGCAGTGAGGTGGTGG...GTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204604.5
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCTCTGGGGCTACCCTaGGTGGTGATCATCAGGGAG +
Preference number: 5 (lower is better)
Translates to: RGAKALGFPQENARRSSMPLGLP*VVIIRE
Trigger: CTCCCTGATGATCACCACCAAGGGTAGCCCCAGAGG...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp CACGTTCAGGAAGAGCTCATTCTGCAGCAGCATATGAGCCCCTCGGGCACCCAGCCAACCTCACATTGGTaGGCTATGTGCACCTGCCCT +
Preference number: 5 (lower is better)
Translates to: HVQEELILQQHMSPSGTQPTSHW*AMCTCP
Trigger: AGGGCAGGTGCACATAGCCAACCAATGTGAGGTTGG...CTGGGTGCCCGAGGGGCTCATATGCTGCTGCAGAATGAGCTCTTCCTGAACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS GCA 90 bp GGCAAGGATGTCCCGCAGAGTCAGCCAGCTCTGCCACTTACAAGCTaGGTGACCCTAGACAAGCTACTTCATCTCTCTGGGCCTCAAGGT +
Preference number: 5 (lower is better)
Translates to: GKDVPQSQPALPLTS*VTLDKLLHLSGPQG
Trigger: ACCTTGAGGCCCAGAGAGATGAAGTAGCTTGTCTAGGGTCACGCAGCTTGTAAGTGGCAGAGCTGGCTGACTCTGCGGGACATCCTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461684.5
CDS GCA 90 bp AAATGGCATCATCTCACCAGGCCATCTTGGGTGGGGGCTGCAGGGTaGTCAAACAGGACACTGCCATTGGAGTCTGAGAAGCGGATCCTG +
Preference number: 5 (lower is better)
Translates to: KWHHLTRPSWVGAAG*SNRTLPLESEKRIL
Trigger: CAGGATCCGCTTCTCAGACTCCAATGGCAGTGTCCTGTTTGAGCACCCTGCAGCCCCCACCCAAGATGGCCTGGTGAGATGATGCCATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000460627.5
ENST00000482014.1
ENST00000482805.5
CDS CCA 90 bp TGGAGCCTCAAGGGAACCTGGGTTAGTCCTGCAAGGCCGCACATGTaGGCCTTTCTGAGACAGGTGCTCTCCCTAACCTTCTCACGTGTT +
Preference number: 5 (lower is better)
Translates to: WSLKGTWVSPARPHM*AFLRQVLSLTFSRV
Trigger: AACACGTGAGAAGGTTAGGGAGAGCACCTGTCTCAGAAAGGCCCACATGTGCGGCCTTGCAGGACTAACCCAGGTTCCCTTGAGGCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460627.5
ENST00000461120.1
ENST00000470150.5
CDS CCA 90 bp GGGCAAGTGCTCATAAATGGCATCATCTCACCAGGCCATCTTGGGTaGGGGCTGCAGGGTGCTCAAACAGGACACTGCCATTGGAGTCTG +
Preference number: 5 (lower is better)
Translates to: GQVLINGIISPGHLG*GLQGAQTGHCHWSL
Trigger: CAGACTCCAATGGCAGTGTCCTGTTTGAGCACCCTGCAGCCCCCACCCAAGATGGCCTGGTGAGATGATGCCATTTATGAGCACTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460627.5
ENST00000482014.1
CDS CCA 90 bp GACTGGGCAAGTGCTCATAAATGGCATCATCTCACCAGGCCATCTTaGGTGGGGGCTGCAGGGTGCTCAAACAGGACACTGCCATTGGAG +
Preference number: 5 (lower is better)
Translates to: DWASAHKWHHLTRPS*VGAAGCSNRTLPLE
Trigger: CTCCAATGGCAGTGTCCTGTTTGAGCACCCTGCAGCCCCCACCCAAGATGGCCTGGTGAGATGATGCCATTTATGAGCACTTGCCCAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460627.5
ENST00000482014.1
CDS-3UTR CAA 90 bp GCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCGTTGGGCACTCTGGTTaGATGTTCTTGCAGCTGACC +
Preference number: 5 (lower is better)
Translates to: AKALGFPQENARRSSMPPVGHSG*MFLQLT
Trigger: GGTCAGCTGCAAGAACATCAAACCAGAGTGCCCAAC...GGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp GCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCAACAGGACACTGCCATaGGAGTCTGAGAAGCGGATC +
Preference number: 5 (lower is better)
Translates to: AKALGFPQENARRSSMPPNRTLP*ESEKRI
Trigger: GATCCGCTTCTCAGACTCCAATGGCAGTGTCCTGTT...GGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp AGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCAACAGGACACTGCCATaGGAGTCTGAGAAGCGGATC +
Preference number: 5 (lower is better)
Translates to: RHWASHRRMQEGPRCHPFNRTLP*ESEKRI
Trigger: GATCCGCTTCTCAGACTCCAATGGCAGTGTCCTGTT...GAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCCACAAAGGACACTTaGCAGGACGTCGCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: SKGTGLPTGECKKVLDATPTKDT*QDVAAL
Trigger: AAGAGCTGCGACGTCCTGCAAAGTGTCCTTTGTGGG...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp TCAGGGGCAGCAGGAGTGGAGTGTCGGGGGCCCTTGGTGCTGAGTGAAGATAAAGCTTGTCCCTACCACTaGCACCTGATAGATCAGGGA +
Preference number: 5 (lower is better)
Translates to: SGAAGVECRGPLVLSEDKACPYH*HLIDQG
Trigger: TCCCTGATCTATCAGGTGCAAGTGGTAGGGACAAGC...TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000204604.5
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp ACCCGTCTGGACTGGGATCAGGGCATCAGCCCCACAAAGGACACTTTGCAGGACGCTTGTCCCTACCACTaGCACCTGATAGATCAGGGA +
Preference number: 5 (lower is better)
Translates to: TRLDWDQGISPTKDTLQDACPYH*HLIDQG
Trigger: TCCCTGATCTATCAGGTGCAAGTGGTAGGGACAAGC...GTCCTGCAAAGTGTCCTTTGTGGGGCTGATGCCCTGATCCCAGTCCAGACGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420973.5
ENST00000448472.5
CDS-3UTR CAA 90 bp AAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTCCAACCTCACATTGGTaGGCTATGTGCACCTGCCCT +
Preference number: 5 (lower is better)
Translates to: KGTGLPTGECKKVLDATPPTSHW*AMCTCP
Trigger: AGGGCAGGTGCACATAGCCAACCAATGTGAGGTTGG...AGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp GAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCAACCTCACATTGGTaGGCTATGTGCACCTGCCCT +
Preference number: 5 (lower is better)
Translates to: EQRHWASHRRMQEGPRCHPTSHW*AMCTCP
Trigger: AGGGCAGGTGCACATAGCCAACCAATGTGAGGTTGG...GTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp AAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCAACCTCACATTGGTaGGCTATGTGCACCTGCCCT +
Preference number: 5 (lower is better)
Translates to: KALGFPQENARRSSMPPLPTSHW*AMCTCP
Trigger: AGGGCAGGTGCACATAGCCAACCAATGTGAGGTTGG...AAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCTCCGCCAACCTCACATaGGTTGGCTATGTGCACCTG +
Preference number: 5 (lower is better)
Translates to: SKGTGLPTGECKKVLDATSANLT*VGYVHL
Trigger: CAGGTGCACATAGCCAACCAATGTGAGGTTGGCGGA...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp GAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACGAGTGTCGGGGGCCCTaGGTGCTGAGTGAAGATAAA +
Preference number: 5 (lower is better)
Translates to: EQRHWASHRRMQEGPRCHECRGP*VLSEDK
Trigger: TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTC...GTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp AAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTGAGTGTCGGGGGCCCTaGGTGCTGAGTGAAGATAAA +
Preference number: 5 (lower is better)
Translates to: KALGFPQENARRSSMPPLECRGP*VLSEDK
Trigger: TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTC...AAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGTCTGGTTTGATGTTCTaGCAGCTGACCCTGCCAGGG +
Preference number: 5 (lower is better)
Translates to: RGAKALGFPQENARRSSMSGLMF*QLTLPG
Trigger: CCCTGGCAGGGTCAGCTGCAAGAACATCAAACCAGA...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp AAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTGCTTGTCCCTACCACTaGCACCTGATAGATCAGGGA +
Preference number: 5 (lower is better)
Translates to: KALGFPQENARRSSMPPLACPYH*HLIDQG
Trigger: TCCCTGATCTATCAGGTGCAAGTGGTAGGGACAAGC...AAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000204604.5
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp AGAGGAGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGAACAGGACACTGCCATaGGAGTCTGAGAAGCGGATC +
Preference number: 5 (lower is better)
Translates to: RGAKALGFPQENARRSSMNRTLP*ESEKRI
Trigger: GATCCGCTTCTCAGACTCCAATGGCAGTGTCCTGTT...CATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp TCAGGGGCAGCAGGAGTGGAGTGTCGGGGGCCCTTGGTGCTGAGTGAAGATAAACAAGTCTCTGACATCTaGTTTCTCAGGGCAAACAGG +
Preference number: 5 (lower is better)
Translates to: SGAAGVECRGPLVLSEDKQVSDI*FLRANR
Trigger: CCTGTTTGCCCTGAGAAACAAGATGTCAGAGACTTG...TTTATCTTCACTCAGCACCAAGGGCCCCCGACACTCCACTCCTGCTGCCCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp AGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCCTTCCAAGTCTCTGACATCTaGTTTCTCAGGGCAAACAGG +
Preference number: 5 (lower is better)
Translates to: RHWASHRRMQEGPRCHPFQVSDI*FLRANR
Trigger: CCTGTTTGCCCTGAGAAACAAGATGTCAGAGACTTG...GAAGGGGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS GCA 90 bp AGAAGGCCCTACGCTCAGACACTGTGCAGGCTAGGCCAATTAGGATaGCCAGGCAGGGCTTATGAAAAAGGAACATGGAAAGGAACCTCC +
Preference number: 5 (lower is better)
Translates to: RRPYAQTLCRLGQLG*PGRAYEKGTWKGTS
Trigger: GGAGGTTCCTTTCCATGTTCCTTTTTCATAAGCCCTGCCTGGGCATCCTAATTGGCCTAGCCTGCACAGTGTCTGAGCGTAGGGCCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460627.5
ENST00000461120.1
CDS CCA 90 bp GGAAAGGAACCTCCAGGGTGCCCTAGGAAGCTTAAGAAAGAACGCTaGAGCCAGATGCTTGGGTTCCAATCCTGGCTGCACCACTTACTA +
Preference number: 5 (lower is better)
Translates to: GKEPPGCPRKLKKER*SQMLGFQSWLHHLL
Trigger: TAGTAAGTGGTGCAGCCAGGATTGGAACCCAAGCATCTGGCTCCAGCGTTCTTTCTTAAGCTTCCTAGGGCACCCTGGAGGTTCCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460627.5
ENST00000461120.1
CDS-3UTR CAA 90 bp AGCAAAGGCACTGGGCTTCCCACAGGAGAATGCAAGAAGGTCCTCGATGCCACCCAAGTCTCTGACATCTaGTTTCTCAGGGCAAACAGG +
Preference number: 5 (lower is better)
Translates to: SKGTGLPTGECKKVLDATQVSDI*FLRANR
Trigger: CCTGTTTGCCCTGAGAAACAAGATGTCAGAGACTTG...GGTGGCATCGAGGACCTTCTTGCATTCTCCTGTGGGAAGCCCAGTGCCTTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS GCA 90 bp CAGGCAGGGCTTATGAAAAAGGAACATGGAAAGGAACCTCCAGGGTaGCCTAGGAAGCTTAAGAAAGAACGCTGGAGCCAGATGCTTGGG +
Preference number: 5 (lower is better)
Translates to: QAGLMKKEHGKEPPG*PRKLKKERWSQMLG
Trigger: CCCAAGCATCTGGCTCCAGCGTTCTTTCTTAAGCTTCCTAGGGCACCCTGGAGGTTCCTTTCCATGTTCCTTTTTCATAAGCCCTGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460627.5
ENST00000461120.1
CDS-3UTR CAA 90 bp ATACAAAACTCTCCAATAATGACTCTGCTCAGCTCAGGGGCAGCAGGAGTGGAGTCCGCCAACCTCACATaGGTTGGCTATGTGCACCTG +
Preference number: 5 (lower is better)
Translates to: IQNSPIMTLLSSGAAGVESANLT*VGYVHL
Trigger: CAGGTGCACATAGCCAACCAATGTGAGGTTGGCGGA...CTCCACTCCTGCTGCCCCTGAGCTGAGCAGAGTCATTATTGGAGAGTTTTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp ATACAAAACTCTCCAATAATGACTCTGCTCAGCTCAGGGGCAGCAGGAGTGGAGGTTGGGCACTCTGGTTaGATGTTCTTGCAGCTGACC +
Preference number: 5 (lower is better)
Translates to: IQNSPIMTLLSSGAAGVEVGHSG*MFLQLT
Trigger: GGTCAGCTGCAAGAACATCAAACCAGAGTGCCCAAC...CTCCACTCCTGCTGCCCCTGAGCTGAGCAGAGTCATTATTGGAGAGTTTTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS-3UTR CAA 90 bp ATACAAAACTCTCCAATAATGACTCTGCTCAGCTCAGGGGCAGCAGGAGTGGAGCAAGTCTCTGACATCTaGTTTCTCAGGGCAAACAGG +
Preference number: 5 (lower is better)
Translates to: IQNSPIMTLLSSGAAGVEQVSDI*FLRANR
Trigger: CCTGTTTGCCCTGAGAAACAAGATGTCAGAGACTTG...CTCCACTCCTGCTGCCCCTGAGCTGAGCAGAGTCATTATTGGAGAGTTTTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000204604.5
ENST00000348986.3
ENST00000420973.5
ENST00000448472.5
ENST00000450923.5
CDS TCA 90 bp GGGCTGGTGACACCTTTGATTCTCTCTCTGGAGCAACTTCAAACATaGAGTCAGCAAACAGGCCAGCGATGTGGGAAACTAAACTTGAGT +
Preference number: 5 (lower is better)
Translates to: GLVTPLILSLEQLQT*SQQTGQRCGKLNLS
Trigger: ACTCAAGTTTAGTTTCCCACATCGCTGGCCTGTTTGCTGACTTCATGTTTGAAGTTGCTCCAGAGAGAGAATCAAAGGTGTCACCAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470150.5
CDS TCA 90 bp GAGAAGAGGGTAACAGGGCAGGAGGGTCTTGTCTTATTCTCTACATaGTTTGGTCTCAAGGTAAGCACAGCCAAAAGCTGGATCAGAGCT +
Preference number: 5 (lower is better)
Translates to: EKRVTGQEGLVLFST*FGLKVSTAKSWIRA
Trigger: AGCTCTGATCCAGCTTTTGGCTGTGCTTACCTTGAGACCAAATCATGTAGAGAATAAGACAAGACCCTCCTGCCCTGTTACCCTCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470150.5
CDS CCA 90 bp TCTGGAGCAACTTCAAACATGAAGTCAGCAAACAGGCCAGCGATGTaGGAAACTAAACTTGAGTCAAAATCCTGCTTCTACTTCCCTAAA +
Preference number: 5 (lower is better)
Translates to: SGATSNMKSANRPAM*ETKLESKSCFYFPK
Trigger: TTTAGGGAAGTAGAAGCAGGATTTTGACTCAAGTTTAGTTTCCCACATCGCTGGCCTGTTTGCTGACTTCATGTTTGAAGTTGCTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470150.5
CDS CCA 72 bp CCCGCCGAAGGTGCAGCCTGCGGGGACGGGCTTGGCTaGAGGCCGCTGCCCAGCTCGCGCCGTGTGCCGCCC +
Preference number: 6 (lower is better)
Translates to: PAEGAACGDGLG*RPLPSSRRVPP
Trigger: GGGCGGCACACGGCGCGAGCTGGGCAGCGGCCTCCAGCCAAGCCCGTCCCCGCAGGCTGCACCTTCGGCGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485883.5
CDS CCA 72 bp CCTTCCCGCCGAAGGTGCAGCCTGCGGGGACGGGCTTaGCTGGAGGCCGCTGCCCAGCTCGCGCCGTGTGCC +
Preference number: 6 (lower is better)
Translates to: PSRRRCSLRGRA*LEAAAQLAPCA
Trigger: GGCACACGGCGCGAGCTGGGCAGCGGCCTCCAGCCAAGCCCGTCCCCGCAGGCTGCACCTTCGGCGGGAAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485883.5
CDS CCA 72 bp ACCACAACCCCGCTGTTCGCCAGCCCCCTACCCGTGTaGCCGTCACCACGGGCCCGCTCCTCAGCGCCTGGC +
Preference number: 6 (lower is better)
Translates to: TTTPLFASPLPV*PSPRARSSAPG
Trigger: GCCAGGCGCTGAGGAGCGGGCCCGTGGTGACGGCCACACGGGTAGGGGGCTGGCGAACAGCGGGGTTGTGGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459711.5
CDS TCA 72 bp GCAGCTGGCCAGCCAGCAGGAGACACCTCGGCCCCCTaGGCGCTGCAGTGGCCCAGGAGGATGCCATTCGCT +
Preference number: 6 (lower is better)
Translates to: AAGQPAGDTSAP*ALQWPRRMPFA
Trigger: AGCGAATGGCATCCTCCTGGGCCACTGCAGCGCTCAGGGGGCCGAGGTGTCTCCTGCTGGCTGGCCAGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460627.5
ENST00000464833.1
CDS CAA 90 bp TCGGCCCCGGCCGCCTCCAGGCGCAGTCCGCCAACCTCACATTGGTaGGCTATGTGCACCTGGGAGGAGAGGCCAACTGAGGCAGCGCTG +
Preference number: 6 (lower is better)
Translates to: SAPAASRRSPPTSHW*AMCTWEERPTEAAL
Trigger: CAGCGCTGCCTCAGTTGGCCTCTCCTCCCAGGTGCACATAGCCAACCAATGTGAGGTTGGCGGACTGCGCCTGGAGGCGGCCGGGGCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460627.5
ENST00000464833.1
CDS GCA 72 bp GATCAGTTCTGGTCTCTGGGGGCCGCCGGTGGGCCGTaGAGCGGGAACAGCATCGACTCTCCTTCCCCGAGC +
Preference number: 6 (lower is better)
Translates to: DQFWSLGAAGGP*SGNSIDSPSPS
Trigger: GCTCGGGGAAGGAGAGTCGATGCTGTTCCCGCTGCACGGCCCACCGGCGGCCCCCAGAGACCAGAACTGATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450923.5
CDS GCA 72 bp TCAGAACTTCACGCCCGGGGCTCTTTGCTCCCTACCTaGAGCCAGGGCCCGGTGCCGGATGAGAGGCCCCCA