RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHODL (Homo sapiens)

Ensembl gene IDs: ENSG00000154645

Ensembl transcript IDs: ENST00000299295.7, ENST00000338326.4, ENST00000400127.5, ENST00000400128.5, ENST00000400131.5, ENST00000400135.5, ENST00000543733.5

Found 408 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATTTGCCTCAAGGGGGAGCTTACAGTTCATCTTGCAGATCCTTTGTaGTTTCAAGCCATTCCAAGCTATTGTTCTGATGCCATTCCTTAT +
Preference number: 1 (lower is better)
Translates to: ICLKGELTVHLADPL*FQAIPSYCSDAIPY
Trigger: ATAAGGAATGGCATCAGAACAATAGCTTGGAATGGCTTGAAATCACAAAGGATCTGCAAGATGAACTGTAAGCTCCCCCTTGAGGCAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
3UTR GCA 90 bp GTGGGCAAGAGAGGGACCACATTGATTTCAGAACCCTCAGAGAGCTaGTTCTCATTATATAGGCAACGTGTGAAGACATATGATTTATAT +
Preference number: 1 (lower is better)
Translates to: VGKRGTTLISEPSES*FSLYRQRVKTYDLY
Trigger: ATATAAATCATATGTCTTCACACGTTGCCTATATAATGAGAAGCAGCTCTCTGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
3UTR TCA 90 bp TCTTGCAGATCCTTTGTGATTTCAAGCCATTCCAAGCTATTGTTCTaGTGCCATTCCTTATACAGATCCAGAATTACAAAATTCTGGAAC +
Preference number: 1 (lower is better)
Translates to: SCRSFVISSHSKLLF*CHSLYRSRITKFWN
Trigger: GTTCCAGAATTTTGTAATTCTGGATCTGTATAAGGAATGGCATCAGAACAATAGCTTGGAATGGCTTGAAATCACAAAGGATCTGCAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
3UTR TCA 90 bp TTTCAGAACCCTCAGAGAGCTGCTTCTCATTATATAGGCAACGTGTaGAGACATATGATTTATATTGTGTATGTCACTTCTTTTGTTCAA +
Preference number: 1 (lower is better)
Translates to: FQNPQRAASHYIGNV*RHMIYIVYVTSFVQ
Trigger: TTGAACAAAAGAAGTGACATACACAATATAAATCATATGTCTTCACACGTTGCCTATATAATGAGAAGCAGCTCTCTGAGGGTTCTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
3UTR CAA 90 bp AACTATCTGCCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTaGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAACCCTC +
Preference number: 2 (lower is better)
Translates to: NYLPPVSIPNPEQPS*FSGQERDHIDFRTL
Trigger: GAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGGCAGATAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
3UTR-3UTR TCA 90 bp TGTCTCCACACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGAGAGAGGGACCACATTaGTTTCAGAACCCTCAGAGA +
Preference number: 2 (lower is better)
Translates to: CLHTDSDYSPGLNHMTSLREGPH*FQNPQR
Trigger: TCTCTGAGGGTTCTGAAATCAATGTGGTCCCTCTCT...CAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGTGTGGAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
3UTR-3UTR GCA 90 bp TCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACGAACCCTCAGAGAGCTaGTTCTCATTATATAGGCAA +
Preference number: 2 (lower is better)
Translates to: SIPNPEQPSLFSGQERDHEPSES*FSLYRQ
Trigger: TTGCCTATATAATGAGAAGCAGCTCTCTGAGGGTTC...GTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
3UTR CAA 90 bp ACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATaGATTTCAGAACCCTCAGAGAGCTGCTTCTCATTATATAGGCAA +
Preference number: 2 (lower is better)
Translates to: TPNNHLCLVGKRGTT*ISEPSESCFSLYRQ
Trigger: TTGCCTATATAATGAGAAGCAGCTCTCTGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
3UTR-3UTR TCA 90 bp TCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACCATTTGCTTGAAGTTTaGAGTTTGGGTGCATCCTTT +
Preference number: 2 (lower is better)
Translates to: SIPNPEQPSLFSGQERDHHLLEV*SLGASF
Trigger: AAAGGATGCACCCAAACTTCAAACTTCAAGCAAATG...GTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
3UTR-3UTR TCA 90 bp CCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTCCAAGCTATTGTTCTaGTGCCATTCCTTATACAGA +
Preference number: 2 (lower is better)
Translates to: PNPEQPSLFSGQERDHIDSKLLF*CHSLYR
Trigger: TCTGTATAAGGAATGGCATCAGAACAATAGCTTGGA...ATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
3UTR-3UTR TCA 90 bp CCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATCATTTGCTTGAAGTTTaGAGTTTGGGTGCATCCTTT +
Preference number: 2 (lower is better)
Translates to: PNPEQPSLFSGQERDHIDHLLEV*SLGASF
Trigger: AAAGGATGCACCCAAACTTCAAACTTCAAGCAAATG...ATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
3UTR-3UTR GCA 90 bp TCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACGCTTACAGTTCATCTTaGAGATCCTTTGTGATTTCA +
Preference number: 2 (lower is better)
Translates to: SIPNPEQPSLFSGQERDHAYSSS*RSFVIS
Trigger: TGAAATCACAAAGGATCTGCAAGATGAACTGTAAGC...GTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
3UTR-3UTR TCA 90 bp GCGATCACTGATGGGTTCCAACCCATTTTCACACGATTTCGTAGTTCCTTTCCTCTGGTCTCAACCACATaGCCTCTTTGTATACTAATA +
Preference number: 2 (lower is better)
Translates to: AITDGFQPIFTRFRSSFPLVSTT*PLCILI
Trigger: TATTAGTATACAAAGAGGTCATGTGGTTGAGACCAG...AGGAAAGGAACTACGAAATCGTGTGAAAATGGGTTGGAACCCATCAGTGATCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
3UTR-3UTR GCA 90 bp CCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAATTACTTTAATATTTaGCTCAAGGGGGAGCTTACA +
Preference number: 2 (lower is better)
Translates to: PPVSIPNPEQPSLFSGQENYFNI*LKGELT
Trigger: TGTAAGCTCCCCCTTGAGGCAAATATTAAAGTAATT...CTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
3UTR-3UTR GCA 90 bp CTCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTGAACCCTCAGAGAGCTaGTTCTCATTATATAGGCAA +
Preference number: 2 (lower is better)
Translates to: LKQTLINEYAITDGFQPIEPSES*FSLYRQ
Trigger: TTGCCTATATAATGAGAAGCAGCTCTCTGAGGGTTC...AATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
3UTR-3UTR TCA 90 bp GAATATGCGATCACTGATGGGTTCCAACCCATTTTCACACGATTTCGTAGTTCCTCCAAGCTATTGTTCTaGTGCCATTCCTTATACAGA +
Preference number: 2 (lower is better)
Translates to: EYAITDGFQPIFTRFRSSSKLLF*CHSLYR
Trigger: TCTGTATAAGGAATGGCATCAGAACAATAGCTTGGA...GGAACTACGAAATCGTGTGAAAATGGGTTGGAACCCATCAGTGATCGCATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
3UTR-3UTR TCA 90 bp CCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAACATTTGCTTGAAGTTTaGAGTTTGGGTGCATCCTTT +
Preference number: 2 (lower is better)
Translates to: PNNHLCLVGKRGTTLISEHLLEV*SLGASF
Trigger: AAAGGATGCACCCAAACTTCAAACTTCAAGCAAATG...TTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
3UTR-3UTR GCA 90 bp CCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATAATTACTTTAATATTTaGCTCAAGGGGGAGCTTACA +
Preference number: 2 (lower is better)
Translates to: PNPEQPSLFSGQERDHIDNYFNI*LKGELT
Trigger: TGTAAGCTCCCCCTTGAGGCAAATATTAAAGTAATT...ATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
3UTR-3UTR GCA 90 bp TCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTTGAACCCTCAGAGAGCTaGTTCTCATTATATAGGCAA +
Preference number: 2 (lower is better)
Translates to: SSKPSSMNMRSLMGSNPFEPSES*FSLYRQ
Trigger: TTGCCTATATAATGAGAAGCAGCTCTCTGAGGGTTC...AAATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
3UTR-3UTR TCA 90 bp TCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTTCTGGTCTCAACCACATaGCCTCTTTGTATACTAATA +
Preference number: 2 (lower is better)
Translates to: SSKPSSMNMRSLMGSNPFLVSTT*PLCILI
Trigger: TATTAGTATACAAAGAGGTCATGTGGTTGAGACCAG...AAATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
3UTR-3UTR GCA 90 bp GAATATGCGATCACTGATGGGTTCCAACCCATTTTCACACGATTTCGTAGTTCCGCTTACAGTTCATCTTaGAGATCCTTTGTGATTTCA +
Preference number: 2 (lower is better)
Translates to: EYAITDGFQPIFTRFRSSAYSSS*RSFVIS
Trigger: TGAAATCACAAAGGATCTGCAAGATGAACTGTAAGC...GGAACTACGAAATCGTGTGAAAATGGGTTGGAACCCATCAGTGATCGCATATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
3UTR-3UTR GCA 90 bp CTCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTGCTTACAGTTCATCTTaGAGATCCTTTGTGATTTCA +
Preference number: 2 (lower is better)
Translates to: LKQTLINEYAITDGFQPIAYSSS*RSFVIS
Trigger: TGAAATCACAAAGGATCTGCAAGATGAACTGTAAGC...AATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
3UTR-3UTR GCA 90 bp GCATTGAAGAAACTAGGAGATAAGACAGAAAGGAGCCACCATTTTCTATCTCAACCTAAAATGTCTGTGTaGTGTGCTTGTCTCCACACT +
Preference number: 2 (lower is better)
Translates to: ALKKLGDKTERSHHFLSQPKMSV*CACLHT
Trigger: AGTGTGGAGACAAGCACAGCACACAGACATTTTAGG...TTGAGATAGAAAATGGTGGCTCCTTTCTGTCTTATCTCCTAGTTTCTTCAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
3UTR-3UTR GCA 90 bp GCATTGAAGAAACTAGGAGATAAGACAGAAAGGAGCCACCATTTTCTATCTCAAGAACCCTCAGAGAGCTaGTTCTCATTATATAGGCAA +
Preference number: 2 (lower is better)
Translates to: ALKKLGDKTERSHHFLSQEPSES*FSLYRQ
Trigger: TTGCCTATATAATGAGAAGCAGCTCTCTGAGGGTTC...TTGAGATAGAAAATGGTGGCTCCTTTCTGTCTTATCTCCTAGTTTCTTCAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
3UTR-3UTR GCA 90 bp ACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGTATACTAATAACTTTGCAACTATCTaGCTCCAGTGTCAATCCCAA +
Preference number: 2 (lower is better)
Translates to: TDSDYSPGLNHMTSLYTNNFATI*LQCQSQ
Trigger: TTGGGATTGACACTGGAGGCAGATAGTTGCAAAGTT...ATTAGTATACAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
3UTR-3UTR TCA 90 bp ACATACTCCCGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCTCCAAGCTATTGTTCTaGTGCCATTCCTTATACAGA +
Preference number: 2 (lower is better)
Translates to: TYSRRVDNNFICIVHFICSKLLF*CHSLYR
Trigger: TCTGTATAAGGAATGGCATCAGAACAATAGCTTGGA...GCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCGGGAGTATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
3UTR-3UTR TCA 90 bp CGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCTTGAAGTTTCTTGCAGATCCTTTGTaGTTTCAAGCCATTCCAAGC +
Preference number: 2 (lower is better)
Translates to: RRVDNNFICIVHFICLKFLADPL*FQAIPS
Trigger: GCTTGGAATGGCTTGAAATCACAAAGGATCTGCAAG...AAACTTCAAGCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
3UTR-3UTR TCA 90 bp GCATTGAAGAAACTAGGAGATAAGACAGAAAGGAGCCACCATTTTCTATCTCAACATTTGCTTGAAGTTTaGAGTTTGGGTGCATCCTTT +
Preference number: 2 (lower is better)
Translates to: ALKKLGDKTERSHHFLSQHLLEV*SLGASF
Trigger: AAAGGATGCACCCAAACTTCAAACTTCAAGCAAATG...TTGAGATAGAAAATGGTGGCTCCTTTCTGTCTTATCTCCTAGTTTCTTCAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
3UTR CAA 90 bp AAAATTACTTTAATATTTGCCTCAAGGGGGAGCTTACAGTTCATCTaGCAGATCCTTTGTGATTTCAAGCCATTCCAAGCTATTGTTCTG +
Preference number: 2 (lower is better)
Translates to: KITLIFASRGSLQFI*QILCDFKPFQAIVL
Trigger: CAGAACAATAGCTTGGAATGGCTTGAAATCACAAAGGATCTGCAAGATGAACTGTAAGCTCCCCCTTGAGGCAAATATTAAAGTAATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
3UTR-3UTR TCA 90 bp CGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCTTGAAGTTTTCCAAGCTATTGTTCTaGTGCCATTCCTTATACAGA +
Preference number: 2 (lower is better)
Translates to: RRVDNNFICIVHFICLKFSKLLF*CHSLYR
Trigger: TCTGTATAAGGAATGGCATCAGAACAATAGCTTGGA...AAACTTCAAGCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
3UTR-3UTR CAA 90 bp TCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACCATACTCCCGACGTGTaGATAACAACTTTATCTGCA +
Preference number: 3 (lower is better)
Translates to: SIPNPEQPSLFSGQERDHHTPDV*ITTLSA
Trigger: TGCAGATAAAGTTGTTATCAACACGTCGGGAGTATG...GTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
3UTR-3UTR CAA 90 bp TGTCTCCACACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGAAGAGAGGGACCACATaGATTTCAGAACCCTCAGAG +
Preference number: 3 (lower is better)
Translates to: CLHTDSDYSPGLNHMTSLKRGTT*ISEPSE
Trigger: CTCTGAGGGTTCTGAAATCAATGTGGTCCCTCTCTT...CAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGTGTGGAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
3UTR-3UTR CAA 90 bp CTCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTAAGAGAGGGACCACATaGATTTCAGAACCCTCAGAG +
Preference number: 3 (lower is better)
Translates to: LKQTLINEYAITDGFQPIKRGTT*ISEPSE
Trigger: CTCTGAGGGTTCTGAAATCAATGTGGTCCCTCTCTT...AATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
3UTR-3UTR CAA 90 bp GGCAAGAGAGGGACCACATTGATTTCAGAACCCTCAGAGAGCTGCTTCTCATTAGTCCATTTCATTTGCTaGAAGTTTGAAGTTTGGGTG +
Preference number: 3 (lower is better)
Translates to: GKRGTTLISEPSESCFSLVHFIC*KFEVWV
Trigger: CACCCAAACTTCAAACTTCAAGCAAATGAAATGGAC...TAATGAGAAGCAGCTCTCTGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
3UTR-3UTR CAA 90 bp CAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTGTCCATTTCATTTGCTaGAAGTTTGAAGTTTGGGTG +
Preference number: 3 (lower is better)
Translates to: QTPNNHLCLVGKRGTTLIVHFIC*KFEVWV
Trigger: CACCCAAACTTCAAACTTCAAGCAAATGAAATGGAC...AATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
3UTR-3UTR CAA 90 bp ACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGTATACTAATCCCGAACAACCATCTTaGTTTAGTGGGCAAGAGAGG +
Preference number: 3 (lower is better)
Translates to: TDSDYSPGLNHMTSLYTNPEQPS*FSGQER
Trigger: CCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGG...ATTAGTATACAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
3UTR-3UTR CAA 90 bp CTCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTAACCTTAGACTAACTTaGCAACTATCTGCCTCCAGT +
Preference number: 3 (lower is better)
Translates to: LKQTLINEYAITDGFQPINLRLT*QLSASS
Trigger: ACTGGAGGCAGATAGTTGCAAAGTTAGTCTAAGGTT...AATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
3UTR GCA 72 bp AGAGGGACCACATTGATTTCAGAACCCTCAGAGAGCTaGTTCTCATTATATAGGCAACGTGTGAAGACATAT +
Preference number: 3 (lower is better)
Translates to: RGTTLISEPSES*FSLYRQRVKTY
Trigger: ATATGTCTTCACACGTTGCCTATATAATGAGAAGCAGCTCTCTGAGGGTTCTGAAATCAATGTGGTCCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
3UTR-3UTR CAA 90 bp GAATATGCGATCACTGATGGGTTCCAACCCATTTTCACACGATTTCGTAGTTCCAGCTTACAGTTCATCTaGCAGATCCTTTGTGATTTC +
Preference number: 3 (lower is better)
Translates to: EYAITDGFQPIFTRFRSSSLQFI*QILCDF
Trigger: GAAATCACAAAGGATCTGCAAGATGAACTGTAAGCT...GGAACTACGAAATCGTGTGAAAATGGGTTGGAACCCATCAGTGATCGCATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
3UTR-3UTR CAA 90 bp TGTCTCCACACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGACATGTCTTGCACAATaGAAATTAGACAATCCTTGC +
Preference number: 3 (lower is better)
Translates to: CLHTDSDYSPGLNHMTSLTCLAQ*KLDNPC
Trigger: GCAAGGATTGTCTAATTTCAATTGTGCAAGACATGT...CAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGTGTGGAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
3UTR-3UTR CAA 90 bp TCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTTGTCCATTTCATTTGCTaGAAGTTTGAAGTTTGGGTG +
Preference number: 3 (lower is better)
Translates to: SSKPSSMNMRSLMGSNPFVHFIC*KFEVWV
Trigger: CACCCAAACTTCAAACTTCAAGCAAATGAAATGGAC...AAATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
3UTR-3UTR CAA 90 bp AACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAACCCTCAACATGTCTTGCACAATaGAAATTAGACAATCCTTGC +
Preference number: 3 (lower is better)
Translates to: NHLCLVGKRGTTLISEPSTCLAQ*KLDNPC
Trigger: GCAAGGATTGTCTAATTTCAATTGTGCAAGACATGT...TGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
3UTR-3UTR CAA 90 bp GAATATGCGATCACTGATGGGTTCCAACCCATTTTCACACGATTTCGTAGTTCCACATGTCTTGCACAATaGAAATTAGACAATCCTTGC +
Preference number: 3 (lower is better)
Translates to: EYAITDGFQPIFTRFRSSTCLAQ*KLDNPC
Trigger: GCAAGGATTGTCTAATTTCAATTGTGCAAGACATGT...GGAACTACGAAATCGTGTGAAAATGGGTTGGAACCCATCAGTGATCGCATATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
3UTR-3UTR CAA 90 bp ACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGTATACTAATAACCTTAGACTAACTTaGCAACTATCTGCCTCCAGT +
Preference number: 3 (lower is better)
Translates to: TDSDYSPGLNHMTSLYTNNLRLT*QLSASS
Trigger: ACTGGAGGCAGATAGTTGCAAAGTTAGTCTAAGGTT...ATTAGTATACAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
3UTR GCA 72 bp CACACATACTCCCGACGTGTTGATAACAACTTTATCTaGATTGTCCATTTCATTTGCTTGAAGTTTGAAGTT +
Preference number: 3 (lower is better)
Translates to: HTYSRRVDNNFI*IVHFICLKFEV
Trigger: AACTTCAAACTTCAAGCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCGGGAGTATGTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
3UTR TCA 72 bp TCCTTTGTGATTTCAAGCCATTCCAAGCTATTGTTCTaGTGCCATTCCTTATACAGATCCAGAATTACAAAA +
Preference number: 3 (lower is better)
Translates to: SFVISSHSKLLF*CHSLYRSRITK
Trigger: TTTTGTAATTCTGGATCTGTATAAGGAATGGCATCAGAACAATAGCTTGGAATGGCTTGAAATCACAAAGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
3UTR GCA 72 bp GTTGATAACAACTTTATCTGCATTGTCCATTTCATTTaGTTGAAGTTTGAAGTTTGGGTGCATCCTTTAGCA +
Preference number: 3 (lower is better)
Translates to: VDNNFICIVHFI*LKFEVWVHPLA
Trigger: TGCTAAAGGATGCACCCAAACTTCAAACTTCAAGCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS-3UTR CCA 90 bp CCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGGCAGCAGGTGTTGCGTaGAGCGAGGGCGGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PPVSIPNPEQPSLFSGQEAAGVA*SEGGLC
Trigger: GCAGAGGCCGCCCTCGCTCCACGCAACACCTGCTGC...CTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS-3UTR TCA 90 bp GGCAAGAGAGGGACCACATTGATTTCAGAACCCTCAGAGAGCTGCTTCTCATTACCGGCCTCTGACAAGTaGGAGGCTGAGCCGGTGCGC +
Preference number: 4 (lower is better)
Translates to: GKRGTTLISEPSESCFSLPASDK*EAEPVR
Trigger: GCGCACCGGCTCAGCCTCTCACTTGTCAGAGGCCGG...TAATGAGAAGCAGCTCTCTGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS-3UTR TCA 90 bp GCGATCACTGATGGGTTCCAACCCATTTTCACACGATTTCGTAGTTCCTTTCCTCGCAGCCCGCGACTCTaGCTCTGCAGCCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: AITDGFQPIFTRFRSSFPRSPRL*LCSLPA
Trigger: GGCAGGGAGGCTGCAGAGTCAGAGTCGCGGGCTGCG...AGGAAAGGAACTACGAAATCGTGTGAAAATGGGTTGGAACCCATCAGTGATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS-3UTR GCA 90 bp CCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGGAGAGGCTGAGCCGGTaGGCCCTGGTCCTGGATCAC +
Preference number: 4 (lower is better)
Translates to: PPVSIPNPEQPSLFSGQEERLSR*ALVLDH
Trigger: GTGATCCAGGACCAGGGCGCACCGGCTCAGCCTCTC...CTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS-3UTR CCA 90 bp GCGATCACTGATGGGTTCCAACCCATTTTCACACGATTTCGTAGTTCCTTTCCTCGCCTGTGCCGCGCGTaGATGTGCGGGGCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: AITDGFQPIFTRFRSSFPRLCRA*MCGAGV
Trigger: AACTCCAGCCCCGCACATCCACGCGCGGCACAGGCG...AGGAAAGGAACTACGAAATCGTGTGAAAATGGGTTGGAACCCATCAGTGATCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS-3UTR CCA 90 bp TCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTTCGGCAGAAGGCTCCGTaGCCGCAGAGCAGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: SSKPSSMNMRSLMGSNPFRQKAP*PQSSAA
Trigger: CGCCGCGCTGCTCTGCGGCCACGGAGCCTTCTGCCG...AAATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS-3UTR GCA 90 bp GATTTCAAGCCATTCCAAGCTATTGTTCTGATGCCATTCCTTATACAGATCCAGAGCTGCCCGACCCCCTaGGCGCATCGCCTTCGGCCG +
Preference number: 4 (lower is better)
Translates to: DFKPFQAIVLMPFLIQIQSCPTP*AHRLRP
Trigger: CGGCCGAAGGCGATGCGCGCAGGGGGTCGGGCAGCT...CTGGATCTGTATAAGGAATGGCATCAGAACAATAGCTTGGAATGGCTTGAAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS-3UTR TCA 90 bp CTCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTGCCAGGCGTGCCTCCTaGAAGCTCACTCGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: LKQTLINEYAITDGFQPIARRAS*KLTRLD
Trigger: GTCCAGCCGAGTGAGCTTTCAGGAGGCACGCCTGGC...AATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp TCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTTGCCAGGCGTGCCTCCTaGAAGCTCACTCGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: SSKPSSMNMRSLMGSNPFARRAS*KLTRLD
Trigger: GTCCAGCCGAGTGAGCTTTCAGGAGGCACGCCTGGC...AAATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp CCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGCTTCATTCTCAAGGCTaGGGAGGACTCCTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: PPVSIPNPEQPSLFSGQELHSQG*GGLLPH
Trigger: GTGAGGGAGGAGTCCTCCTCAGCCTTGAGAATGAAG...CTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp GGCAAGAGAGGGACCACATTGATTTCAGAACCCTCAGAGAGCTGCTTCTCATTACACACCGTTGCGCTTTaGTTCTCTTCCCCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: GKRGTTLISEPSESCFSLHTVAL*FSSPAS
Trigger: AGAGGCCGGGGAAGAGAAGCAAAGCGCAACGGTGTG...TAATGAGAAGCAGCTCTCTGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS-3UTR TCA 90 bp GATTTCAAGCCATTCCAAGCTATTGTTCTGATGCCATTCCTTATACAGATCCAGACACCTTTTGGCCGCTaGCCACGCGGCGGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: DFKPFQAIVLMPFLIQIQTPFGR*PRGGRR
Trigger: CCTTCTGCCGCCGCGTGGTCAGCGGCCAAAAGGTGT...CTGGATCTGTATAAGGAATGGCATCAGAACAATAGCTTGGAATGGCTTGAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS-3UTR GCA 90 bp ATTACTTTAATATTTGCCTCAAGGGGGAGCTTACAGTTCATCTTGCAGATCCTTGGCAGCAGCAGGTGTTaGGTGGAGCGAGGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: ITLIFASRGSLQFILQILGSSRC*VERGRP
Trigger: AGGCCGCCCTCGCTCCACGCAACACCTGCTGCTGCC...AAGGATCTGCAAGATGAACTGTAAGCTCCCCCTTGAGGCAAATATTAAAGTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS-3UTR GCA 90 bp TTTGCAACTATCTGCCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTCTCACAAGCCAGGCGTaGCTCCTGAAAGCTCACTCG +
Preference number: 4 (lower is better)
Translates to: FATICLQCQSQTPNNHLCLTSQA*LLKAHS
Trigger: CGAGTGAGCTTTCAGGAGGCACGCCTGGCTTGTGAG...ACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGGCAGATAGTTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp GAATATGCGATCACTGATGGGTTCCAACCCATTTTCACACGATTTCGTAGTTCCGCAGAAGCCCCGGCTTaGACCACACCGTTGCGCTTT +
Preference number: 4 (lower is better)
Translates to: EYAITDGFQPIFTRFRSSAEAPA*TTPLRF
Trigger: AAAGCGCAACGGTGTGGTCCAAGCCGGGGCTTCTGC...GGAACTACGAAATCGTGTGAAAATGGGTTGGAACCCATCAGTGATCGCATATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS-3UTR CCA 90 bp AACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAACCCTCATCGAGGGTGCGCGTTTaGGGGACTGAAGTTAGGGGG +
Preference number: 4 (lower is better)
Translates to: NHLCLVGKRGTTLISEPSSRVRV*GTEVRG
Trigger: CCCCCTAACTTCAGTCCCCCAAACGCGCACCCTCGA...TGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS-3UTR CCA 90 bp CCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGCCACTGGTAGAGATCTaGGCAGGCACCAGATGTTTG +
Preference number: 4 (lower is better)
Translates to: PPVSIPNPEQPSLFSGQEPLVEI*AGTRCL
Trigger: CAAACATCTGGTGCCTGCCCAGATCTCTACCAGTGG...CTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp CCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGCCCCAAGGCCAGGATTaGCAGTTGGTTGGTGATACA +
Preference number: 4 (lower is better)
Translates to: PPVSIPNPEQPSLFSGQEPQGQD*QLVGDT
Trigger: TGTATCACCAACCAACTGCCAATCCTGGCCTTGGGG...CTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp TGTCTCCACACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGCTTCATTCTCAAGGCTaGGGAGGACTCCTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: CLHTDSDYSPGLNHMTSLLHSQG*GGLLPH
Trigger: GTGAGGGAGGAGTCCTCCTCAGCCTTGAGAATGAAG...CAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGTGTGGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp GAATATGCGATCACTGATGGGTTCCAACCCATTTTCACACGATTTCGTAGTTCCGTGGATGTGCGGGGCTaGAGTTCAAGACTTCGAGGG +
Preference number: 4 (lower is better)
Translates to: EYAITDGFQPIFTRFRSSVDVRG*SSRLRG
Trigger: CCCTCGAAGTCTTGAACTCCAGCCCCGCACATCCAC...GGAACTACGAAATCGTGTGAAAATGGGTTGGAACCCATCAGTGATCGCATATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS-3UTR CCA 90 bp ACATACTCCCGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCCTCATCGCGGCGCGGTaGCAGCAGCAGGTGTTGCGT +
Preference number: 4 (lower is better)
Translates to: TYSRRVDNNFICIVHFICLIAAR*QQQVLR
Trigger: ACGCAACACCTGCTGCTGCCACCGCGCCGCGATGAG...GCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCGGGAGTATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS-3UTR TCA 90 bp AACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAACCCTCACTTCATTCTCAAGGCTaGGGAGGACTCCTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: NHLCLVGKRGTTLISEPSLHSQG*GGLLPH
Trigger: GTGAGGGAGGAGTCCTCCTCAGCCTTGAGAATGAAG...TGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp CCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGAGAGGGACCACATTaGTTTCAGAACCCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: PPVSIPNPEQPSLFSGQEREGPH*FQNPQR
Trigger: TCTCTGAGGGTTCTGAAATCAATGTGGTCCCTCTCT...CTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp TGTCTCCACACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGCCCCAAGGCCAGGATTaGCAGTTGGTTGGTGATACA +
Preference number: 4 (lower is better)
Translates to: CLHTDSDYSPGLNHMTSLPQGQD*QLVGDT
Trigger: TGTATCACCAACCAACTGCCAATCCTGGCCTTGGGG...CAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGTGTGGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp GAATATGCGATCACTGATGGGTTCCAACCCATTTTCACACGATTTCGTAGTTCCCAGGCCATTCCTGCCTaGGACCACAGAGATCCATCA +
Preference number: 4 (lower is better)
Translates to: EYAITDGFQPIFTRFRSSQAIPA*DHRDPS
Trigger: TGATGGATCTCTGTGGTCCCAGGCAGGAATGGCCTG...GGAACTACGAAATCGTGTGAAAATGGGTTGGAACCCATCAGTGATCGCATATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400128.5
CDS-3UTR CCA 90 bp CCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAAAAAGGCCTGAGAGCCTaGGCAGGATTCCTGGTGCAA +
Preference number: 4 (lower is better)
Translates to: PNNHLCLVGKRGTTLISEKGLRA*AGFLVQ
Trigger: TTGCACCAGGAATCCTGCCCAGGCTCTCAGGCCTTT...TTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400128.5
3UTR CAA 72 bp CCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTaGTTTAGTGGGCAAGAGAGGGACCACATTGATTTC +
Preference number: 4 (lower is better)
Translates to: PPVSIPNPEQPS*FSGQERDHIDF
Trigger: GAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp TCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTTCTTCATTCTCAAGGCTaGGGAGGACTCCTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: SSKPSSMNMRSLMGSNPFLHSQG*GGLLPH
Trigger: GTGAGGGAGGAGTCCTCCTCAGCCTTGAGAATGAAG...AAATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp GATTTCAAGCCATTCCAAGCTATTGTTCTGATGCCATTCCTTATACAGATCCAGCTCACAAGCCAGGCGTaGCTCCTGAAAGCTCACTCG +
Preference number: 4 (lower is better)
Translates to: DFKPFQAIVLMPFLIQIQLTSQA*LLKAHS
Trigger: CGAGTGAGCTTTCAGGAGGCACGCCTGGCTTGTGAG...CTGGATCTGTATAAGGAATGGCATCAGAACAATAGCTTGGAATGGCTTGAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR GCA 90 bp GCGATCACTGATGGGTTCCAACCCATTTTCACACGATTTCGTAGTTCCTTTCCTCAGGCACCAGATGTTTaGCCATCTCCATTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: AITDGFQPIFTRFRSSFPQAPDV*PSPFLQ
Trigger: TTGGAGGAATGGAGATGGGCAAACATCTGGTGCCTG...AGGAAAGGAACTACGAAATCGTGTGAAAATGGGTTGGAACCCATCAGTGATCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp CCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCGGTACTGGGAATTaGTTCCATCAGACCACTGGT +
Preference number: 4 (lower is better)
Translates to: PNPEQPSLFSGQERDHIDFGTGN*FHQTTG
Trigger: ACCAGTGGTCTGATGGAAGCAATTCCCAGTACCGAA...ATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp CAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTGAAAGCTCACTCGGCTaGACAGTTCATGGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: QTPNNHLCLVGKRGTTLIESSLG*TVHGSR
Trigger: CCTACTTCCATGAACTGTCCAGCCGAGTGAGCTTTC...AATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp CCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAACCACTGGTAGAGATCTaGGCAGGCACCAGATGTTTG +
Preference number: 4 (lower is better)
Translates to: PNNHLCLVGKRGTTLISEPLVEI*AGTRCL
Trigger: CAAACATCTGGTGCCTGCCCAGATCTCTACCAGTGG...TTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp CTCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTCCACTGGTAGAGATCTaGGCAGGCACCAGATGTTTG +
Preference number: 4 (lower is better)
Translates to: LKQTLINEYAITDGFQPIPLVEI*AGTRCL
Trigger: CAAACATCTGGTGCCTGCCCAGATCTCTACCAGTGG...AATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp CCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATGCCAGGATTGGCAGTTaGTTGGTGATACATCACAAC +
Preference number: 4 (lower is better)
Translates to: PNPEQPSLFSGQERDHIDARIGS*LVIHHN
Trigger: GTTGTGATGTATCACCAACCAACTGCCAATCCTGGC...ATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp AACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAACCCTCACCCCAAGGCCAGGATTaGCAGTTGGTTGGTGATACA +
Preference number: 4 (lower is better)
Translates to: NHLCLVGKRGTTLISEPSPQGQD*QLVGDT
Trigger: TGTATCACCAACCAACTGCCAATCCTGGCCTTGGGG...TGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp TTTGCAACTATCTGCCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTTGGCTCACTCAATTATaGAGGCTGAGAAGTCCCACG +
Preference number: 4 (lower is better)
Translates to: FATICLQCQSQTPNNHLCWLTQL*RLRSPT
Trigger: CGTGGGACTTCTCAGCCTCCATAATTGAGTGAGCCA...ACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGGCAGATAGTTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp TTTGCAACTATCTGCCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTCTGCCATCTTCAAGCTaGAGAACCAGGAAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: FATICLQCQSQTPNNHLCLPSSS*RTRKAS
Trigger: ACTGGCTTTCCTGGTTCTCCAGCTTGAAGATGGCAG...ACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGGCAGATAGTTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400128.5
CDS-3UTR TCA 90 bp TTTGCAACTATCTGCCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTAGAGAGGGACCACATTaGTTTCAGAACCCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: FATICLQCQSQTPNNHLCREGPH*FQNPQR
Trigger: TCTCTGAGGGTTCTGAAATCAATGTGGTCCCTCTCT...ACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGGCAGATAGTTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp GCATTGAAGAAACTAGGAGATAAGACAGAAAGGAGCCACCATTTTCTATCTCAACTCACAAGCCAGGCGTaGCTCCTGAAAGCTCACTCG +
Preference number: 4 (lower is better)
Translates to: ALKKLGDKTERSHHFLSQLTSQA*LLKAHS
Trigger: CGAGTGAGCTTTCAGGAGGCACGCCTGGCTTGTGAG...TTGAGATAGAAAATGGTGGCTCCTTTCTGTCTTATCTCCTAGTTTCTTCAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp ACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGTATACTAATCTCACAAGCCAGGCGTaGCTCCTGAAAGCTCACTCG +
Preference number: 4 (lower is better)
Translates to: TDSDYSPGLNHMTSLYTNLTSQA*LLKAHS
Trigger: CGAGTGAGCTTTCAGGAGGCACGCCTGGCTTGTGAG...ATTAGTATACAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp ACATACTCCCGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCCTCACAAGCCAGGCGTaGCTCCTGAAAGCTCACTCG +
Preference number: 4 (lower is better)
Translates to: TYSRRVDNNFICIVHFICLTSQA*LLKAHS
Trigger: CGAGTGAGCTTTCAGGAGGCACGCCTGGCTTGTGAG...GCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCGGGAGTATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS-3UTR GCA 90 bp AACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAACCCTCACAGGCACCAGATGTTTaGCCATCTCCATTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: NHLCLVGKRGTTLISEPSQAPDV*PSPFLQ
Trigger: TTGGAGGAATGGAGATGGGCAAACATCTGGTGCCTG...TGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp CCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAACAGGCACCAGATGTTTaGCCATCTCCATTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: PNNHLCLVGKRGTTLISEQAPDV*PSPFLQ
Trigger: TTGGAGGAATGGAGATGGGCAAACATCTGGTGCCTG...TTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp CCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAACTTTGCAACTATCTaGCTCCAGTGTCAATCCCAA +
Preference number: 4 (lower is better)
Translates to: PPVSIPNPEQPSLFSGQENFATI*LQCQSQ
Trigger: TTGGGATTGACACTGGAGGCAGATAGTTGCAAAGTT...CTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp GGCAAGAGAGGGACCACATTGATTTCAGAACCCTCAGAGAGCTGCTTCTCATTACCTAAAATGTCTGTGTaGTGTGCTTGTCTCCACACT +
Preference number: 4 (lower is better)
Translates to: GKRGTTLISEPSESCFSLPKMSV*CACLHT
Trigger: AGTGTGGAGACAAGCACAGCACACAGACATTTTAGG...TAATGAGAAGCAGCTCTCTGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp GCATTGAAGAAACTAGGAGATAAGACAGAAAGGAGCCACCATTTTCTATCTCAACAAGCAGGCCATTCCTaGCTGGGACCACAGAGATCC +
Preference number: 4 (lower is better)
Translates to: ALKKLGDKTERSHHFLSQQAGHS*LGPQRS
Trigger: GGATCTCTGTGGTCCCAGGCAGGAATGGCCTGCTTG...TTGAGATAGAAAATGGTGGCTCCTTTCTGTCTTATCTCCTAGTTTCTTCAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400128.5
CDS-3UTR CCA 90 bp CCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAAGAAAGCTCACTCGGCTaGACAGTTCATGGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: PNNHLCLVGKRGTTLISEESSLG*TVHGSR
Trigger: CCTACTTCCATGAACTGTCCAGCCGAGTGAGCTTTC...TTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp GAATATGCGATCACTGATGGGTTCCAACCCATTTTCACACGATTTCGTAGTTCCGAAAGCTCACTCGGCTaGACAGTTCATGGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: EYAITDGFQPIFTRFRSSESSLG*TVHGSR
Trigger: CCTACTTCCATGAACTGTCCAGCCGAGTGAGCTTTC...GGAACTACGAAATCGTGTGAAAATGGGTTGGAACCCATCAGTGATCGCATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp AACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAACCCTCAGAAAGCTCACTCGGCTaGACAGTTCATGGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: NHLCLVGKRGTTLISEPSESSLG*TVHGSR
Trigger: CCTACTTCCATGAACTGTCCAGCCGAGTGAGCTTTC...TGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp CCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTACCAGTTTCGGTACTaGGAATTGCTTCCATCAGAC +
Preference number: 4 (lower is better)
Translates to: PNPEQPSLFSGQERDHIDYQFRY*ELLPSD
Trigger: GTCTGATGGAAGCAATTCCCAGTACCGAAACTGGTA...ATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp CAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTGCCAGGATTGGCAGTTaGTTGGTGATACATCACAAC +
Preference number: 4 (lower is better)
Translates to: QTPNNHLCLVGKRGTTLIARIGS*LVIHHN
Trigger: GTTGTGATGTATCACCAACCAACTGCCAATCCTGGC...AATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp TCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACCTGATGGGTGTCTCCTaGTTGATTTGTAAGATAAGG +
Preference number: 4 (lower is better)
Translates to: SIPNPEQPSLFSGQERDHLMGVS*LICKIR
Trigger: CCTTATCTTACAAATCAACCAGGAGACACCCATCAG...GTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp GCATTGAAGAAACTAGGAGATAAGACAGAAAGGAGCCACCATTTTCTATCTCAACTTCATTCTCAAGGCTaGGGAGGACTCCTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: ALKKLGDKTERSHHFLSQLHSQG*GGLLPH
Trigger: GTGAGGGAGGAGTCCTCCTCAGCCTTGAGAATGAAG...TTGAGATAGAAAATGGTGGCTCCTTTCTGTCTTATCTCCTAGTTTCTTCAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp ACATACTCCCGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCCTTCATTCTCAAGGCTaGGGAGGACTCCTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: TYSRRVDNNFICIVHFICLHSQG*GGLLPH
Trigger: GTGAGGGAGGAGTCCTCCTCAGCCTTGAGAATGAAG...GCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCGGGAGTATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS-3UTR TCA 90 bp CCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTGGCAGTTGGTTGGTaGTACATCACAACACACTTT +
Preference number: 4 (lower is better)
Translates to: PNPEQPSLFSGQERDHIDLAVGW*YITTHF
Trigger: AAAGTGTGTTGTGATGTATCACCAACCAACTGCCAA...ATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp TCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACTTTTCTGGTACTCTTTaGAATCCACAGTGTAGACTG +
Preference number: 4 (lower is better)
Translates to: SIPNPEQPSLFSGQERDHFSGTL*NPQCRL
Trigger: CAGTCTACACTGTGGATTTCAAAGAGTACCAGAAAA...GTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp CCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGCTGGAACCAAGTCAATaGGTTATTATACTTCCATGC +
Preference number: 4 (lower is better)
Translates to: PPVSIPNPEQPSLFSGQELEPSQ*VIILPC
Trigger: GCATGGAAGTATAATAACTCATTGACTTGGTTCCAG...CTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp TCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACTCCAAGCTATTGTTCTaGTGCCATTCCTTATACAGA +
Preference number: 4 (lower is better)
Translates to: SIPNPEQPSLFSGQERDHSKLLF*CHSLYR
Trigger: TCTGTATAAGGAATGGCATCAGAACAATAGCTTGGA...GTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp CAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTCTTGCAGATCCTTTGTaGTTTCAAGCCATTCCAAGC +
Preference number: 4 (lower is better)
Translates to: QTPNNHLCLVGKRGTTLILADPL*FQAIPS
Trigger: GCTTGGAATGGCTTGAAATCACAAAGGATCTGCAAG...AATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp TGTCTCCACACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGCTTGCAGATCCTTTGTaGTTTCAAGCCATTCCAAGC +
Preference number: 4 (lower is better)
Translates to: CLHTDSDYSPGLNHMTSLLADPL*FQAIPS
Trigger: GCTTGGAATGGCTTGAAATCACAAAGGATCTGCAAG...CAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGTGTGGAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp CCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGCATTTGCTTGAAGTTTaGAGTTTGGGTGCATCCTTT +
Preference number: 4 (lower is better)
Translates to: PPVSIPNPEQPSLFSGQEHLLEV*SLGASF
Trigger: AAAGGATGCACCCAAACTTCAAACTTCAAGCAAATG...CTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp CCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAAAGAGAGGGACCACATTaGTTTCAGAACCCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: PNNHLCLVGKRGTTLISEREGPH*FQNPQR
Trigger: TCTCTGAGGGTTCTGAAATCAATGTGGTCCCTCTCT...TTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp AACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAACCCTCAAGAGAGGGACCACATTaGTTTCAGAACCCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: NHLCLVGKRGTTLISEPSREGPH*FQNPQR
Trigger: TCTCTGAGGGTTCTGAAATCAATGTGGTCCCTCTCT...TGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp GGCAAGAGAGGGACCACATTGATTTCAGAACCCTCAGAGAGCTGCTTCTCATTAGTTACAACTTTCTCTTaGGAAGAACAAGGCGTAAGC +
Preference number: 4 (lower is better)
Translates to: GKRGTTLISEPSESCFSLVTTFS*EEQGVS
Trigger: GCTTACGCCTTGTTCTTCTCAAGAGAAAGTTGTAAC...TAATGAGAAGCAGCTCTCTGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp ATCTTGCAGATCCTTTGTGATTTCAAGCCATTCCAAGCTATTGTTCTGATGCCACGGCCCAACTCCAGCTaGCTTCATTTTCTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: ILQILCDFKPFQAIVLMPRPNSS*LHFLGS
Trigger: ACTTCCCAGAAAATGAAGTCAGCTGGAGTTGGGCCG...TGGCATCAGAACAATAGCTTGGAATGGCTTGAAATCACAAAGGATCTGCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543733.5
CDS-3UTR GCA 90 bp GCATTGAAGAAACTAGGAGATAAGACAGAAAGGAGCCACCATTTTCTATCTCAATCAAGACTTCGAGGGTaGGCGTTTGGGGGACTGAAG +
Preference number: 4 (lower is better)
Translates to: ALKKLGDKTERSHHFLSQSRLRG*AFGGLK
Trigger: CTTCAGTCCCCCAAACGCGCACCCTCGAAGTCTTGA...TTGAGATAGAAAATGGTGGCTCCTTTCTGTCTTATCTCCTAGTTTCTTCAATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS-3UTR GCA 90 bp GGCAAGAGAGGGACCACATTGATTTCAGAACCCTCAGAGAGCTGCTTCTCATTAGAACCCTCAGAGAGCTaGTTCTCATTATATAGGCAA +
Preference number: 4 (lower is better)
Translates to: GKRGTTLISEPSESCFSLEPSES*FSLYRQ
Trigger: TTGCCTATATAATGAGAAGCAGCTCTCTGAGGGTTC...TAATGAGAAGCAGCTCTCTGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp ACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGTATACTAATGGGCAGGATTCCTGGTaGAAGTCTCAGAGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: TDSDYSPGLNHMTSLYTNGQDSW*KSQSPK
Trigger: CTTGGGACTCTGAGACTTGCACCAGGAATCCTGCCC...ATTAGTATACAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400128.5
CDS-3UTR CCA 90 bp CCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAAGCCAGGATTGGCAGTTaGTTGGTGATACATCACAAC +
Preference number: 4 (lower is better)
Translates to: PNNHLCLVGKRGTTLISEARIGS*LVIHHN
Trigger: GTTGTGATGTATCACCAACCAACTGCCAATCCTGGC...TTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp GAATATGCGATCACTGATGGGTTCCAACCCATTTTCACACGATTTCGTAGTTCCGCCAGGATTGGCAGTTaGTTGGTGATACATCACAAC +
Preference number: 4 (lower is better)
Translates to: EYAITDGFQPIFTRFRSSARIGS*LVIHHN
Trigger: GTTGTGATGTATCACCAACCAACTGCCAATCCTGGC...GGAACTACGAAATCGTGTGAAAATGGGTTGGAACCCATCAGTGATCGCATATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp ATCTTGCAGATCCTTTGTGATTTCAAGCCATTCCAAGCTATTGTTCTGATGCCACCCCAAGGCCAGGATTaGCAGTTGGTTGGTGATACA +
Preference number: 4 (lower is better)
Translates to: ILQILCDFKPFQAIVLMPPQGQD*QLVGDT
Trigger: TGTATCACCAACCAACTGCCAATCCTGGCCTTGGGG...TGGCATCAGAACAATAGCTTGGAATGGCTTGAAATCACAAAGGATCTGCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR CCA 90 bp GATTTCAAGCCATTCCAAGCTATTGTTCTGATGCCATTCCTTATACAGATCCAGCCCCAAGGCCAGGATTaGCAGTTGGTTGGTGATACA +
Preference number: 4 (lower is better)
Translates to: DFKPFQAIVLMPFLIQIQPQGQD*QLVGDT
Trigger: TGTATCACCAACCAACTGCCAATCCTGGCCTTGGGG...CTGGATCTGTATAAGGAATGGCATCAGAACAATAGCTTGGAATGGCTTGAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR CCA 90 bp CCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGTTCTACAGGGGCTGTTaGATTAATCTCTGGTTCATA +
Preference number: 4 (lower is better)
Translates to: PPVSIPNPEQPSLFSGQEFYRGC*INLWFI
Trigger: TATGAACCAGAGATTAATCCAACAGCCCCTGTAGAA...CTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp TCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACCAGTGTAGACTGGTTTaGACTAGTTTTTGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SIPNPEQPSLFSGQERDHQCRLV*TSFCSS
Trigger: GGAAGAACAAAAACTAGTCCAAACCAGTCTACACTG...GTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp CCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGCAGTGTAGACTGGTTTaGACTAGTTTTTGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PPVSIPNPEQPSLFSGQEQCRLV*TSFCSS
Trigger: GGAAGAACAAAAACTAGTCCAAACCAGTCTACACTG...CTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp GGCAAGAGAGGGACCACATTGATTTCAGAACCCTCAGAGAGCTGCTTCTCATTATTTTCTGGTACTCTTTaGAATCCACAGTGTAGACTG +
Preference number: 4 (lower is better)
Translates to: GKRGTTLISEPSESCFSLFSGTL*NPQCRL
Trigger: CAGTCTACACTGTGGATTTCAAAGAGTACCAGAAAA...TAATGAGAAGCAGCTCTCTGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp TCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTTAGAGAGGGACCACATTaGTTTCAGAACCCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: SSKPSSMNMRSLMGSNPFREGPH*FQNPQR
Trigger: TCTCTGAGGGTTCTGAAATCAATGTGGTCCCTCTCT...AAATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp CAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTGTTACAACTTTCTCTTaGGAAGAACAAGGCGTAAGC +
Preference number: 4 (lower is better)
Translates to: QTPNNHLCLVGKRGTTLIVTTFS*EEQGVS
Trigger: GCTTACGCCTTGTTCTTCTCAAGAGAAAGTTGTAAC...AATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp CCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGCTTCCTTTACTTTTATaGAGCATCTGGAAACAACAG +
Preference number: 4 (lower is better)
Translates to: PPVSIPNPEQPSLFSGQELPLLL*SIWKQQ
Trigger: CTGTTGTTTCCAGATGCTGCATAAAAGTAAAGGAAG...CTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
CDS-3UTR GCA 90 bp CCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGGCTTACAGTTCATCTTaGAGATCCTTTGTGATTTCA +
Preference number: 4 (lower is better)
Translates to: PPVSIPNPEQPSLFSGQEAYSSS*RSFVIS
Trigger: TGAAATCACAAAGGATCTGCAAGATGAACTGTAAGC...CTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp GCGATCACTGATGGGTTCCAACCCATTTTCACACGATTTCGTAGTTCCTTTCCTGAACCCTCAGAGAGCTaGTTCTCATTATATAGGCAA +
Preference number: 4 (lower is better)
Translates to: AITDGFQPIFTRFRSSFPEPSES*FSLYRQ
Trigger: TTGCCTATATAATGAGAAGCAGCTCTCTGAGGGTTC...AGGAAAGGAACTACGAAATCGTGTGAAAATGGGTTGGAACCCATCAGTGATCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp TGTCTCCACACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGGAACCCTCAGAGAGCTaGTTCTCATTATATAGGCAA +
Preference number: 4 (lower is better)
Translates to: CLHTDSDYSPGLNHMTSLEPSES*FSLYRQ
Trigger: TTGCCTATATAATGAGAAGCAGCTCTCTGAGGGTTC...CAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGTGTGGAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp GCATTGAAGAAACTAGGAGATAAGACAGAAAGGAGCCACCATTTTCTATCTCAACCACTGGTAGAGATCTaGGCAGGCACCAGATGTTTG +
Preference number: 4 (lower is better)
Translates to: ALKKLGDKTERSHHFLSQPLVEI*AGTRCL
Trigger: CAAACATCTGGTGCCTGCCCAGATCTCTACCAGTGG...TTGAGATAGAAAATGGTGGCTCCTTTCTGTCTTATCTCCTAGTTTCTTCAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp ATTACTTTAATATTTGCCTCAAGGGGGAGCTTACAGTTCATCTTGCAGATCCTTCCACTGGTAGAGATCTaGGCAGGCACCAGATGTTTG +
Preference number: 4 (lower is better)
Translates to: ITLIFASRGSLQFILQILPLVEI*AGTRCL
Trigger: CAAACATCTGGTGCCTGCCCAGATCTCTACCAGTGG...AAGGATCTGCAAGATGAACTGTAAGCTCCCCCTTGAGGCAAATATTAAAGTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR CCA 90 bp CTCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTTACCAGTTTCGGTACTaGGAATTGCTTCCATCAGAC +
Preference number: 4 (lower is better)
Translates to: LKQTLINEYAITDGFQPIYQFRY*ELLPSD
Trigger: GTCTGATGGAAGCAATTCCCAGTACCGAAACTGGTA...AATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp AACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAACCCTCATACCAGTTTCGGTACTaGGAATTGCTTCCATCAGAC +
Preference number: 4 (lower is better)
Translates to: NHLCLVGKRGTTLISEPSYQFRY*ELLPSD
Trigger: GTCTGATGGAAGCAATTCCCAGTACCGAAACTGGTA...TGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp ACATACTCCCGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCCCCCAAGGCCAGGATTaGCAGTTGGTTGGTGATACA +
Preference number: 4 (lower is better)
Translates to: TYSRRVDNNFICIVHFICPQGQD*QLVGDT
Trigger: TGTATCACCAACCAACTGCCAATCCTGGCCTTGGGG...GCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCGGGAGTATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS-3UTR CCA 90 bp ATTACTTTAATATTTGCCTCAAGGGGGAGCTTACAGTTCATCTTGCAGATCCTTCCCCAAGGCCAGGATTaGCAGTTGGTTGGTGATACA +
Preference number: 4 (lower is better)
Translates to: ITLIFASRGSLQFILQILPQGQD*QLVGDT
Trigger: TGTATCACCAACCAACTGCCAATCCTGGCCTTGGGG...AAGGATCTGCAAGATGAACTGTAAGCTCCCCCTTGAGGCAAATATTAAAGTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR CCA 90 bp CAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTCTGATGGGTGTCTCCTaGTTGATTTGTAAGATAAGG +
Preference number: 4 (lower is better)
Translates to: QTPNNHLCLVGKRGTTLILMGVS*LICKIR
Trigger: CCTTATCTTACAAATCAACCAGGAGACACCCATCAG...AATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp TGTCTCCACACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGCTGATGGGTGTCTCCTaGTTGATTTGTAAGATAAGG +
Preference number: 4 (lower is better)
Translates to: CLHTDSDYSPGLNHMTSLLMGVS*LICKIR
Trigger: CCTTATCTTACAAATCAACCAGGAGACACCCATCAG...CAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGTGTGGAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp GGCAAGAGAGGGACCACATTGATTTCAGAACCCTCAGAGAGCTGCTTCTCATTACAGTGTAGACTGGTTTaGACTAGTTTTTGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: GKRGTTLISEPSESCFSLQCRLV*TSFCSS
Trigger: GGAAGAACAAAAACTAGTCCAAACCAGTCTACACTG...TAATGAGAAGCAGCTCTCTGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp TCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATCCACAGTGTAGACTaGTTTGGACTAGTTTTTGTT +
Preference number: 4 (lower is better)
Translates to: SIPNPEQPSLFSGQERDHIHSVD*FGLVFV
Trigger: AACAAAAACTAGTCCAAACCAGTCTACACTGTGGAT...GTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp CCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGCAAGAACTCTTTATTTaGTTAAAAGGAGCACAGGGA +
Preference number: 4 (lower is better)
Translates to: PPVSIPNPEQPSLFSGQEQELFI*LKGAQG
Trigger: TCCCTGTGCTCCTTTTAACCAAATAAAGAGTTCTTG...CTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp AACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAACCCTCAGCAAAACACACCTTTTaGCAGTTCTGGAGGCTAGAA +
Preference number: 4 (lower is better)
Translates to: NHLCLVGKRGTTLISEPSAKHTF*QFWRLE
Trigger: TTCTAGCCTCCAGAACTGCCAAAAGGTGTGTTTTGC...TGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400127.5
ENST00000400135.5
CDS-3UTR CCA 90 bp CTCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTGCAAAACACACCTTTTaGCAGTTCTGGAGGCTAGAA +
Preference number: 4 (lower is better)
Translates to: LKQTLINEYAITDGFQPIAKHTF*QFWRLE
Trigger: TTCTAGCCTCCAGAACTGCCAAAAGGTGTGTTTTGC...AATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400127.5
ENST00000400135.5
CDS-3UTR CCA 90 bp GATTTCAAGCCATTCCAAGCTATTGTTCTGATGCCATTCCTTATACAGATCCAGGCAAAACACACCTTTTaGCTGTGTGCCGAACCTGCA +
Preference number: 4 (lower is better)
Translates to: DFKPFQAIVLMPFLIQIQAKHTF*LCAEPA
Trigger: TGCAGGTTCGGCACACAGCCAAAAGGTGTGTTTTGC...CTGGATCTGTATAAGGAATGGCATCAGAACAATAGCTTGGAATGGCTTGAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543733.5
CDS-3UTR TCA 90 bp CCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAATTGGCAGTTGGTTGGTaGTACATCACAACACACTTT +
Preference number: 4 (lower is better)
Translates to: PNNHLCLVGKRGTTLISELAVGW*YITTHF
Trigger: AAAGTGTGTTGTGATGTATCACCAACCAACTGCCAA...TTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp GAATATGCGATCACTGATGGGTTCCAACCCATTTTCACACGATTTCGTAGTTCCTTGGCAGTTGGTTGGTaGTACATCACAACACACTTT +
Preference number: 4 (lower is better)
Translates to: EYAITDGFQPIFTRFRSSLAVGW*YITTHF
Trigger: AAAGTGTGTTGTGATGTATCACCAACCAACTGCCAA...GGAACTACGAAATCGTGTGAAAATGGGTTGGAACCCATCAGTGATCGCATATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp TGTCTCCACACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGTTTTCTGGTACTCTTTaGAATCCACAGTGTAGACTG +
Preference number: 4 (lower is better)
Translates to: CLHTDSDYSPGLNHMTSLFSGTL*NPQCRL
Trigger: CAGTCTACACTGTGGATTTCAAAGAGTACCAGAAAA...CAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGTGTGGAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp TTTGCAACTATCTGCCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTTTTTCTGGTACTCTTTaGAATCCACAGTGTAGACTG +
Preference number: 4 (lower is better)
Translates to: FATICLQCQSQTPNNHLCFSGTL*NPQCRL
Trigger: CAGTCTACACTGTGGATTTCAAAGAGTACCAGAAAA...ACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGGCAGATAGTTGCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp TCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTTCTTGCAGATCCTTTGTaGTTTCAAGCCATTCCAAGC +
Preference number: 4 (lower is better)
Translates to: SSKPSSMNMRSLMGSNPFLADPL*FQAIPS
Trigger: GCTTGGAATGGCTTGAAATCACAAAGGATCTGCAAG...AAATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp TGTCTCCACACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGCTGGTCTCAACCACATaGCCTCTTTGTATACTAATA +
Preference number: 4 (lower is better)
Translates to: CLHTDSDYSPGLNHMTSLLVSTT*PLCILI
Trigger: TATTAGTATACAAAGAGGTCATGTGGTTGAGACCAG...CAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGTGTGGAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp AACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAACCCTCAGTTACAACTTTCTCTTaGGAAGAACAAGGCGTAAGC +
Preference number: 4 (lower is better)
Translates to: NHLCLVGKRGTTLISEPSVTTFS*EEQGVS
Trigger: GCTTACGCCTTGTTCTTCTCAAGAGAAAGTTGTAAC...TGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp CCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAAGTTACAACTTTCTCTTaGGAAGAACAAGGCGTAAGC +
Preference number: 4 (lower is better)
Translates to: PNNHLCLVGKRGTTLISEVTTFS*EEQGVS
Trigger: GCTTACGCCTTGTTCTTCTCAAGAGAAAGTTGTAAC...TTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp CCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGTCAGGTTTTGCAACATaGTCTCTATTAACTTCTGTT +
Preference number: 4 (lower is better)
Translates to: PPVSIPNPEQPSLFSGQESGFAT*SLLTSV
Trigger: AACAGAAGTTAATAGAGAGCATGTTGCAAAACCTGA...CTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp ACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGTATACTAATCAGGCACCAGATGTTTaGCCATCTCCATTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: TDSDYSPGLNHMTSLYTNQAPDV*PSPFLQ
Trigger: TTGGAGGAATGGAGATGGGCAAACATCTGGTGCCTG...ATTAGTATACAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp GCATTGAAGAAACTAGGAGATAAGACAGAAAGGAGCCACCATTTTCTATCTCAACAGGCACCAGATGTTTaGCCATCTCCATTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: ALKKLGDKTERSHHFLSQQAPDV*PSPFLQ
Trigger: TTGGAGGAATGGAGATGGGCAAACATCTGGTGCCTG...TTGAGATAGAAAATGGTGGCTCCTTTCTGTCTTATCTCCTAGTTTCTTCAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp ATCTTGCAGATCCTTTGTGATTTCAAGCCATTCCAAGCTATTGTTCTGATGCCATTCGGTACTGGGAATTaGTTCCATCAGACCACTGGT +
Preference number: 4 (lower is better)
Translates to: ILQILCDFKPFQAIVLMPFGTGN*FHQTTG
Trigger: ACCAGTGGTCTGATGGAAGCAATTCCCAGTACCGAA...TGGCATCAGAACAATAGCTTGGAATGGCTTGAAATCACAAAGGATCTGCAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR GCA 90 bp CCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATGCTTACAGTTCATCTTaGAGATCCTTTGTGATTTCA +
Preference number: 4 (lower is better)
Translates to: PNPEQPSLFSGQERDHIDAYSSS*RSFVIS
Trigger: TGAAATCACAAAGGATCTGCAAGATGAACTGTAAGC...ATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp AACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAACCCTCAAACTTTGCAACTATCTaGCTCCAGTGTCAATCCCAA +
Preference number: 4 (lower is better)
Translates to: NHLCLVGKRGTTLISEPSNFATI*LQCQSQ
Trigger: TTGGGATTGACACTGGAGGCAGATAGTTGCAAAGTT...TGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp TCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTTCCTAAAATGTCTGTGTaGTGTGCTTGTCTCCACACT +
Preference number: 4 (lower is better)
Translates to: SSKPSSMNMRSLMGSNPFPKMSV*CACLHT
Trigger: AGTGTGGAGACAAGCACAGCACACAGACATTTTAGG...AAATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp GATTTCAAGCCATTCCAAGCTATTGTTCTGATGCCATTCCTTATACAGATCCAGGCTGTGTGCCGAACCTaGAGTCATTACCAAGTATAC +
Preference number: 4 (lower is better)
Translates to: DFKPFQAIVLMPFLIQIQAVCRT*SHYQVY
Trigger: GTATACTTGGTAATGACTGCAGGTTCGGCACACAGC...CTGGATCTGTATAAGGAATGGCATCAGAACAATAGCTTGGAATGGCTTGAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543733.5
CDS-3UTR CCA 90 bp GCATTGAAGAAACTAGGAGATAAGACAGAAAGGAGCCACCATTTTCTATCTCAAGAAAGCTCACTCGGCTaGACAGTTCATGGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: ALKKLGDKTERSHHFLSQESSLG*TVHGSR
Trigger: CCTACTTCCATGAACTGTCCAGCCGAGTGAGCTTTC...TTGAGATAGAAAATGGTGGCTCCTTTCTGTCTTATCTCCTAGTTTCTTCAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp ACATACTCCCGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCGAAAGCTCACTCGGCTaGACAGTTCATGGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: TYSRRVDNNFICIVHFICESSLG*TVHGSR
Trigger: CCTACTTCCATGAACTGTCCAGCCGAGTGAGCTTTC...GCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCGGGAGTATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS-3UTR CCA 90 bp GATTTCAAGCCATTCCAAGCTATTGTTCTGATGCCATTCCTTATACAGATCCAGGCCAGGATTGGCAGTTaGTTGGTGATACATCACAAC +
Preference number: 4 (lower is better)
Translates to: DFKPFQAIVLMPFLIQIQARIGS*LVIHHN
Trigger: GTTGTGATGTATCACCAACCAACTGCCAATCCTGGC...CTGGATCTGTATAAGGAATGGCATCAGAACAATAGCTTGGAATGGCTTGAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR CCA 90 bp TTTGCAACTATCTGCCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTTTCTACAGGGGCTGTTaGATTAATCTCTGGTTCATA +
Preference number: 4 (lower is better)
Translates to: FATICLQCQSQTPNNHLCFYRGC*INLWFI
Trigger: TATGAACCAGAGATTAATCCAACAGCCCCTGTAGAA...ACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGGCAGATAGTTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp CAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTTCTACAGGGGCTGTTaGATTAATCTCTGGTTCATA +
Preference number: 4 (lower is better)
Translates to: QTPNNHLCLVGKRGTTLIFYRGC*INLWFI
Trigger: TATGAACCAGAGATTAATCCAACAGCCCCTGTAGAA...AATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp CCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAACTGATGGGTGTCTCCTaGTTGATTTGTAAGATAAGG +
Preference number: 4 (lower is better)
Translates to: PNNHLCLVGKRGTTLISELMGVS*LICKIR
Trigger: CCTTATCTTACAAATCAACCAGGAGACACCCATCAG...TTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp CCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATCAAGAACTCTTTATTTaGTTAAAAGGAGCACAGGGA +
Preference number: 4 (lower is better)
Translates to: PNPEQPSLFSGQERDHIDQELFI*LKGAQG
Trigger: TCCCTGTGCTCCTTTTAACCAAATAAAGAGTTCTTG...ATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp ATTACTTTAATATTTGCCTCAAGGGGGAGCTTACAGTTCATCTTGCAGATCCTTTGGCTCACTCAATTATaGAGGCTGAGAAGTCCCACG +
Preference number: 4 (lower is better)
Translates to: ITLIFASRGSLQFILQILWLTQL*RLRSPT
Trigger: CGTGGGACTTCTCAGCCTCCATAATTGAGTGAGCCA...AAGGATCTGCAAGATGAACTGTAAGCTCCCCCTTGAGGCAAATATTAAAGTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400127.5
ENST00000400128.5
CDS-3UTR CCA 90 bp ACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGTATACTAATTGGCTCACTCAATTATaGAGGCTGAGAAGTCCCACG +
Preference number: 4 (lower is better)
Translates to: TDSDYSPGLNHMTSLYTNWLTQL*RLRSPT
Trigger: CGTGGGACTTCTCAGCCTCCATAATTGAGTGAGCCA...ATTAGTATACAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp GCATTGAAGAAACTAGGAGATAAGACAGAAAGGAGCCACCATTTTCTATCTCAATGGCTCACTCAATTATaGAGGCTGAGAAGTCCCACG +
Preference number: 4 (lower is better)
Translates to: ALKKLGDKTERSHHFLSQWLTQL*RLRSPT
Trigger: CGTGGGACTTCTCAGCCTCCATAATTGAGTGAGCCA...TTGAGATAGAAAATGGTGGCTCCTTTCTGTCTTATCTCCTAGTTTCTTCAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp CCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAATTTTCTGGTACTCTTTaGAATCCACAGTGTAGACTG +
Preference number: 4 (lower is better)
Translates to: PNNHLCLVGKRGTTLISEFSGTL*NPQCRL
Trigger: CAGTCTACACTGTGGATTTCAAAGAGTACCAGAAAA...TTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp CCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAACTGGAACCAAGTCAATaGGTTATTATACTTCCATGC +
Preference number: 4 (lower is better)
Translates to: PNNHLCLVGKRGTTLISELEPSQ*VIILPC
Trigger: GCATGGAAGTATAATAACTCATTGACTTGGTTCCAG...TTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp CCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAATCCAAGCTATTGTTCTaGTGCCATTCCTTATACAGA +
Preference number: 4 (lower is better)
Translates to: PNNHLCLVGKRGTTLISESKLLF*CHSLYR
Trigger: TCTGTATAAGGAATGGCATCAGAACAATAGCTTGGA...TTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp AACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAACCCTCATCCAAGCTATTGTTCTaGTGCCATTCCTTATACAGA +
Preference number: 4 (lower is better)
Translates to: NHLCLVGKRGTTLISEPSSKLLF*CHSLYR
Trigger: TCTGTATAAGGAATGGCATCAGAACAATAGCTTGGA...TGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp CTCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTTCCAAGCTATTGTTCTaGTGCCATTCCTTATACAGA +
Preference number: 4 (lower is better)
Translates to: LKQTLINEYAITDGFQPISKLLF*CHSLYR
Trigger: TCTGTATAAGGAATGGCATCAGAACAATAGCTTGGA...AATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp GAATATGCGATCACTGATGGGTTCCAACCCATTTTCACACGATTTCGTAGTTCCCATTTGCTTGAAGTTTaGAGTTTGGGTGCATCCTTT +
Preference number: 4 (lower is better)
Translates to: EYAITDGFQPIFTRFRSSHLLEV*SLGASF
Trigger: AAAGGATGCACCCAAACTTCAAACTTCAAGCAAATG...GGAACTACGAAATCGTGTGAAAATGGGTTGGAACCCATCAGTGATCGCATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp CTCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTCATTTGCTTGAAGTTTaGAGTTTGGGTGCATCCTTT +
Preference number: 4 (lower is better)
Translates to: LKQTLINEYAITDGFQPIHLLEV*SLGASF
Trigger: AAAGGATGCACCCAAACTTCAAACTTCAAGCAAATG...AATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp CTCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTCTGGTCTCAACCACATaGCCTCTTTGTATACTAATA +
Preference number: 4 (lower is better)
Translates to: LKQTLINEYAITDGFQPILVSTT*PLCILI
Trigger: TATTAGTATACAAAGAGGTCATGTGGTTGAGACCAG...AATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp AACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAACCCTCACTGGTCTCAACCACATaGCCTCTTTGTATACTAATA +
Preference number: 4 (lower is better)
Translates to: NHLCLVGKRGTTLISEPSLVSTT*PLCILI
Trigger: TATTAGTATACAAAGAGGTCATGTGGTTGAGACCAG...TGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp GCATTGAAGAAACTAGGAGATAAGACAGAAAGGAGCCACCATTTTCTATCTCAACTGATGTCCTGGAGCTaGGTCAATTTAGAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: ALKKLGDKTERSHHFLSQLMSWS*VNLESQ
Trigger: TTGGCTCTCTAAATTGACTCAGCTCCAGGACATCAG...TTGAGATAGAAAATGGTGGCTCCTTTCTGTCTTATCTCCTAGTTTCTTCAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400128.5
CDS-3UTR GCA 90 bp CCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTCAGGTTTTGCAACATaGTCTCTATTAACTTCTGTT +
Preference number: 4 (lower is better)
Translates to: PNPEQPSLFSGQERDHIDSGFAT*SLLTSV
Trigger: AACAGAAGTTAATAGAGAGCATGTTGCAAAACCTGA...ATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp ACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGTATACTAATTTCGGTACTGGGAATTaGTTCCATCAGACCACTGGT +
Preference number: 4 (lower is better)
Translates to: TDSDYSPGLNHMTSLYTNFGTGN*FHQTTG
Trigger: ACCAGTGGTCTGATGGAAGCAATTCCCAGTACCGAA...ATTAGTATACAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp ACATACTCCCGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCTTCGGTACTGGGAATTaGTTCCATCAGACCACTGGT +
Preference number: 4 (lower is better)
Translates to: TYSRRVDNNFICIVHFICFGTGN*FHQTTG
Trigger: ACCAGTGGTCTGATGGAAGCAATTCCCAGTACCGAA...GCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCGGGAGTATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS-3UTR GCA 90 bp ATTACTTTAATATTTGCCTCAAGGGGGAGCTTACAGTTCATCTTGCAGATCCTTTTCGGTACTGGGAATTaGTTCCATCAGACCACTGGT +
Preference number: 4 (lower is better)
Translates to: ITLIFASRGSLQFILQILFGTGN*FHQTTG
Trigger: ACCAGTGGTCTGATGGAAGCAATTCCCAGTACCGAA...AAGGATCTGCAAGATGAACTGTAAGCTCCCCCTTGAGGCAAATATTAAAGTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR GCA 90 bp TTTGCAACTATCTGCCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTCTTCCTTTACTTTTATaGAGCATCTGGAAACAACAG +
Preference number: 4 (lower is better)
Translates to: FATICLQCQSQTPNNHLCLPLLL*SIWKQQ
Trigger: CTGTTGTTTCCAGATGCTGCATAAAAGTAAAGGAAG...ACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGGCAGATAGTTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
CDS-3UTR GCA 90 bp TGTCTCCACACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGGCTTACAGTTCATCTTaGAGATCCTTTGTGATTTCA +
Preference number: 4 (lower is better)
Translates to: CLHTDSDYSPGLNHMTSLAYSSS*RSFVIS
Trigger: TGAAATCACAAAGGATCTGCAAGATGAACTGTAAGC...CAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGTGTGGAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp GGCAAGAGAGGGACCACATTGATTTCAGAACCCTCAGAGAGCTGCTTCTCATTAAATTACTTTAATATTTaGCTCAAGGGGGAGCTTACA +
Preference number: 4 (lower is better)
Translates to: GKRGTTLISEPSESCFSLNYFNI*LKGELT
Trigger: TGTAAGCTCCCCCTTGAGGCAAATATTAAAGTAATT...TAATGAGAAGCAGCTCTCTGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp TCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTTAACTTTGCAACTATCTaGCTCCAGTGTCAATCCCAA +
Preference number: 4 (lower is better)
Translates to: SSKPSSMNMRSLMGSNPFNFATI*LQCQSQ
Trigger: TTGGGATTGACACTGGAGGCAGATAGTTGCAAAGTT...AAATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp ATCTTGCAGATCCTTTGTGATTTCAAGCCATTCCAAGCTATTGTTCTGATGCCACCTAAAATGTCTGTGTaGTGTGCTTGTCTCCACACT +
Preference number: 4 (lower is better)
Translates to: ILQILCDFKPFQAIVLMPPKMSV*CACLHT
Trigger: AGTGTGGAGACAAGCACAGCACACAGACATTTTAGG...TGGCATCAGAACAATAGCTTGGAATGGCTTGAAATCACAAAGGATCTGCAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
CDS-3UTR GCA 90 bp ATTACTTTAATATTTGCCTCAAGGGGGAGCTTACAGTTCATCTTGCAGATCCTTAGAAGTCCCACGATCTaGCATCTTCAAGCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: ITLIFASRGSLQFILQILRSPTI*HLQAGE
Trigger: TTCTCCAGCTTGAAGATGGCAGATCGTGGGACTTCT...AAGGATCTGCAAGATGAACTGTAAGCTCCCCCTTGAGGCAAATATTAAAGTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400128.5
CDS-3UTR CCA 90 bp CGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCTTGAAGTTTCCACTGGTAGAGATCTaGGCAGGCACCAGATGTTTG +
Preference number: 4 (lower is better)
Translates to: RRVDNNFICIVHFICLKFPLVEI*AGTRCL
Trigger: CAAACATCTGGTGCCTGCCCAGATCTCTACCAGTGG...AAACTTCAAGCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS-3UTR CCA 90 bp GAATATGCGATCACTGATGGGTTCCAACCCATTTTCACACGATTTCGTAGTTCCTTCTACAGGGGCTGTTaGATTAATCTCTGGTTCATA +
Preference number: 4 (lower is better)
Translates to: EYAITDGFQPIFTRFRSSFYRGC*INLWFI
Trigger: TATGAACCAGAGATTAATCCAACAGCCCCTGTAGAA...GGAACTACGAAATCGTGTGAAAATGGGTTGGAACCCATCAGTGATCGCATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp TCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTTCTGATGGGTGTCTCCTaGTTGATTTGTAAGATAAGG +
Preference number: 4 (lower is better)
Translates to: SSKPSSMNMRSLMGSNPFLMGVS*LICKIR
Trigger: CCTTATCTTACAAATCAACCAGGAGACACCCATCAG...AAATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp GCGATCACTGATGGGTTCCAACCCATTTTCACACGATTTCGTAGTTCCTTTCCTCTTTTATGCAGCATCTaGAAACAACAGGTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: AITDGFQPIFTRFRSSFPLLCSI*KQQVPK
Trigger: TTTTGGAACCTGTTGTTTCCAGATGCTGCATAAAAG...AGGAAAGGAACTACGAAATCGTGTGAAAATGGGTTGGAACCCATCAGTGATCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
CDS-3UTR CCA 90 bp TGTCTCCACACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGATCCACAGTGTAGACTaGTTTGGACTAGTTTTTGTT +
Preference number: 4 (lower is better)
Translates to: CLHTDSDYSPGLNHMTSLIHSVD*FGLVFV
Trigger: AACAAAAACTAGTCCAAACCAGTCTACACTGTGGAT...CAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGTGTGGAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp TTTGCAACTATCTGCCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTCAAGAACTCTTTATTTaGTTAAAAGGAGCACAGGGA +
Preference number: 4 (lower is better)
Translates to: FATICLQCQSQTPNNHLCQELFI*LKGAQG
Trigger: TCCCTGTGCTCCTTTTAACCAAATAAAGAGTTCTTG...ACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGGCAGATAGTTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp CCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAATTGTATTCAGGGAATTaGCTCACTCAATTATGGAGG +
Preference number: 4 (lower is better)
Translates to: PNNHLCLVGKRGTTLISELYSGN*LTQLWR
Trigger: CCTCCATAATTGAGTGAGCCAATTCCCTGAATACAA...TTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400127.5
ENST00000400135.5
3UTR CAA 72 bp TTAATATTTGCCTCAAGGGGGAGCTTACAGTTCATCTaGCAGATCCTTTGTGATTTCAAGCCATTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: LIFASRGSLQFI*QILCDFKPFQA
Trigger: AGCTTGGAATGGCTTGAAATCACAAAGGATCTGCAAGATGAACTGTAAGCTCCCCCTTGAGGCAAATATTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR TCA 90 bp ATCTTGCAGATCCTTTGTGATTTCAAGCCATTCCAAGCTATTGTTCTGATGCCATTGGCAGTTGGTTGGTaGTACATCACAACACACTTT +
Preference number: 4 (lower is better)
Translates to: ILQILCDFKPFQAIVLMPLAVGW*YITTHF
Trigger: AAAGTGTGTTGTGATGTATCACCAACCAACTGCCAA...TGGCATCAGAACAATAGCTTGGAATGGCTTGAAATCACAAAGGATCTGCAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR TCA 90 bp TCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTTCTGGAACCAAGTCAATaGGTTATTATACTTCCATGC +
Preference number: 4 (lower is better)
Translates to: SSKPSSMNMRSLMGSNPFLEPSQ*VIILPC
Trigger: GCATGGAAGTATAATAACTCATTGACTTGGTTCCAG...AAATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp TCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTTTCCAAGCTATTGTTCTaGTGCCATTCCTTATACAGA +
Preference number: 4 (lower is better)
Translates to: SSKPSSMNMRSLMGSNPFSKLLF*CHSLYR
Trigger: TCTGTATAAGGAATGGCATCAGAACAATAGCTTGGA...AAATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp ATTACTTTAATATTTGCCTCAAGGGGGAGCTTACAGTTCATCTTGCAGATCCTTCTTGCAGATCCTTTGTaGTTTCAAGCCATTCCAAGC +
Preference number: 4 (lower is better)
Translates to: ITLIFASRGSLQFILQILLADPL*FQAIPS
Trigger: GCTTGGAATGGCTTGAAATCACAAAGGATCTGCAAG...AAGGATCTGCAAGATGAACTGTAAGCTCCCCCTTGAGGCAAATATTAAAGTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR TCA 90 bp GCATTGAAGAAACTAGGAGATAAGACAGAAAGGAGCCACCATTTTCTATCTCAACTTGCAGATCCTTTGTaGTTTCAAGCCATTCCAAGC +
Preference number: 4 (lower is better)
Translates to: ALKKLGDKTERSHHFLSQLADPL*FQAIPS
Trigger: GCTTGGAATGGCTTGAAATCACAAAGGATCTGCAAG...TTGAGATAGAAAATGGTGGCTCCTTTCTGTCTTATCTCCTAGTTTCTTCAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp TCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTTCATTTGCTTGAAGTTTaGAGTTTGGGTGCATCCTTT +
Preference number: 4 (lower is better)
Translates to: SSKPSSMNMRSLMGSNPFHLLEV*SLGASF
Trigger: AAAGGATGCACCCAAACTTCAAACTTCAAGCAAATG...AAATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp CGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCTTGAAGTTTCAGGCACCAGATGTTTaGCCATCTCCATTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: RRVDNNFICIVHFICLKFQAPDV*PSPFLQ
Trigger: TTGGAGGAATGGAGATGGGCAAACATCTGGTGCCTG...AAACTTCAAGCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS-3UTR GCA 90 bp GCGATCACTGATGGGTTCCAACCCATTTTCACACGATTTCGTAGTTCCTTTCCTATTGGGAATTATACCTaGTTCAGTAACAACCACATT +
Preference number: 4 (lower is better)
Translates to: AITDGFQPIFTRFRSSFPIGNYT*FSNNHI
Trigger: AATGTGGTTGTTACTGAAGCAGGTATAATTCCCAAT...AGGAAAGGAACTACGAAATCGTGTGAAAATGGGTTGGAACCCATCAGTGATCGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
CDS-3UTR GCA 90 bp TGTCTCCACACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGATTGGGAATTATACCTaGTTCAGTAACAACCACATT +
Preference number: 4 (lower is better)
Translates to: CLHTDSDYSPGLNHMTSLIGNYT*FSNNHI
Trigger: AATGTGGTTGTTACTGAAGCAGGTATAATTCCCAAT...CAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGTGTGGAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
CDS-3UTR GCA 90 bp CCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAACTTCCTTTACTTTTATaGAGCATCTGGAAACAACAG +
Preference number: 4 (lower is better)
Translates to: PNNHLCLVGKRGTTLISELPLLL*SIWKQQ
Trigger: CTGTTGTTTCCAGATGCTGCATAAAAGTAAAGGAAG...TTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
CDS-3UTR GCA 90 bp TTTGCAACTATCTGCCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTGTTATTATACTTCCATaGCACTTTCTTTTCTGGTAC +
Preference number: 4 (lower is better)
Translates to: FATICLQCQSQTPNNHLCVIILP*HFLFWY
Trigger: GTACCAGAAAAGAAAGTGGCATGGAAGTATAATAAC...ACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGGCAGATAGTTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp TGTCTCCACACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGAATTACTTTAATATTTaGCTCAAGGGGGAGCTTACA +
Preference number: 4 (lower is better)
Translates to: CLHTDSDYSPGLNHMTSLNYFNI*LKGELT
Trigger: TGTAAGCTCCCCCTTGAGGCAAATATTAAAGTAATT...CAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGTGTGGAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp ATCTTGCAGATCCTTTGTGATTTCAAGCCATTCCAAGCTATTGTTCTGATGCCAAACTTTGCAACTATCTaGCTCCAGTGTCAATCCCAA +
Preference number: 4 (lower is better)
Translates to: ILQILCDFKPFQAIVLMPNFATI*LQCQSQ
Trigger: TTGGGATTGACACTGGAGGCAGATAGTTGCAAAGTT...TGGCATCAGAACAATAGCTTGGAATGGCTTGAAATCACAAAGGATCTGCAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
CDS-3UTR GCA 90 bp CGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCTTGAAGTTTCACCTTTTGGCTGTGTaGCGAACCTGCAGTCATTAC +
Preference number: 4 (lower is better)
Translates to: RRVDNNFICIVHFICLKFHLLAV*RTCSHY
Trigger: GTAATGACTGCAGGTTCGGCACACAGCCAAAAGGTG...AAACTTCAAGCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543733.5
CDS-3UTR CCA 90 bp ACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGTATACTAATTACCAGTTTCGGTACTaGGAATTGCTTCCATCAGAC +
Preference number: 4 (lower is better)
Translates to: TDSDYSPGLNHMTSLYTNYQFRY*ELLPSD
Trigger: GTCTGATGGAAGCAATTCCCAGTACCGAAACTGGTA...ATTAGTATACAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp ACATACTCCCGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCTACCAGTTTCGGTACTaGGAATTGCTTCCATCAGAC +
Preference number: 4 (lower is better)
Translates to: TYSRRVDNNFICIVHFICYQFRY*ELLPSD
Trigger: GTCTGATGGAAGCAATTCCCAGTACCGAAACTGGTA...GCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCGGGAGTATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS-3UTR CCA 90 bp ATTACTTTAATATTTGCCTCAAGGGGGAGCTTACAGTTCATCTTGCAGATCCTTTACCAGTTTCGGTACTaGGAATTGCTTCCATCAGAC +
Preference number: 4 (lower is better)
Translates to: ITLIFASRGSLQFILQILYQFRY*ELLPSD
Trigger: GTCTGATGGAAGCAATTCCCAGTACCGAAACTGGTA...AAGGATCTGCAAGATGAACTGTAAGCTCCCCCTTGAGGCAAATATTAAAGTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR CCA 90 bp TCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTTCAGTGTAGACTGGTTTaGACTAGTTTTTGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SSKPSSMNMRSLMGSNPFQCRLV*TSFCSS
Trigger: GGAAGAACAAAAACTAGTCCAAACCAGTCTACACTG...AAATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp GAATATGCGATCACTGATGGGTTCCAACCCATTTTCACACGATTTCGTAGTTCCATCCACAGTGTAGACTaGTTTGGACTAGTTTTTGTT +
Preference number: 4 (lower is better)
Translates to: EYAITDGFQPIFTRFRSSIHSVD*FGLVFV
Trigger: AACAAAAACTAGTCCAAACCAGTCTACACTGTGGAT...GGAACTACGAAATCGTGTGAAAATGGGTTGGAACCCATCAGTGATCGCATATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp AACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAACCCTCACAAGAACTCTTTATTTaGTTAAAAGGAGCACAGGGA +
Preference number: 4 (lower is better)
Translates to: NHLCLVGKRGTTLISEPSQELFI*LKGAQG
Trigger: TCCCTGTGCTCCTTTTAACCAAATAAAGAGTTCTTG...TGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp ATTACTTTAATATTTGCCTCAAGGGGGAGCTTACAGTTCATCTTGCAGATCCTTGCTGACTTCATTTTCTaGGAAGTCCCCAACTTGGAA +
Preference number: 4 (lower is better)
Translates to: ITLIFASRGSLQFILQILADFIF*EVPNLE
Trigger: TTCCAAGTTGGGGACTTCCCAGAAAATGAAGTCAGC...AAGGATCTGCAAGATGAACTGTAAGCTCCCCCTTGAGGCAAATATTAAAGTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543733.5
CDS-3UTR TCA 90 bp ACATACTCCCGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCTTGGCAGTTGGTTGGTaGTACATCACAACACACTTT +
Preference number: 4 (lower is better)
Translates to: TYSRRVDNNFICIVHFICLAVGW*YITTHF
Trigger: AAAGTGTGTTGTGATGTATCACCAACCAACTGCCAA...GCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCGGGAGTATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS-3UTR TCA 90 bp GCATTGAAGAAACTAGGAGATAAGACAGAAAGGAGCCACCATTTTCTATCTCAATTGGCAGTTGGTTGGTaGTACATCACAACACACTTT +
Preference number: 4 (lower is better)
Translates to: ALKKLGDKTERSHHFLSQLAVGW*YITTHF
Trigger: AAAGTGTGTTGTGATGTATCACCAACCAACTGCCAA...TTGAGATAGAAAATGGTGGCTCCTTTCTGTCTTATCTCCTAGTTTCTTCAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp GATTTCAAGCCATTCCAAGCTATTGTTCTGATGCCATTCCTTATACAGATCCAGTTTTCTGGTACTCTTTaGAATCCACAGTGTAGACTG +
Preference number: 4 (lower is better)
Translates to: DFKPFQAIVLMPFLIQIQFSGTL*NPQCRL
Trigger: CAGTCTACACTGTGGATTTCAAAGAGTACCAGAAAA...CTGGATCTGTATAAGGAATGGCATCAGAACAATAGCTTGGAATGGCTTGAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR TCA 90 bp ATCTTGCAGATCCTTTGTGATTTCAAGCCATTCCAAGCTATTGTTCTGATGCCATTTTCTGGTACTCTTTaGAATCCACAGTGTAGACTG +
Preference number: 4 (lower is better)
Translates to: ILQILCDFKPFQAIVLMPFSGTL*NPQCRL
Trigger: CAGTCTACACTGTGGATTTCAAAGAGTACCAGAAAA...TGGCATCAGAACAATAGCTTGGAATGGCTTGAAATCACAAAGGATCTGCAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR TCA 90 bp ATCTTGCAGATCCTTTGTGATTTCAAGCCATTCCAAGCTATTGTTCTGATGCCACTGGAACCAAGTCAATaGGTTATTATACTTCCATGC +
Preference number: 4 (lower is better)
Translates to: ILQILCDFKPFQAIVLMPLEPSQ*VIILPC
Trigger: GCATGGAAGTATAATAACTCATTGACTTGGTTCCAG...TGGCATCAGAACAATAGCTTGGAATGGCTTGAAATCACAAAGGATCTGCAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR TCA 90 bp ACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGTATACTAATGTTACAACTTTCTCTTaGGAAGAACAAGGCGTAAGC +
Preference number: 4 (lower is better)
Translates to: TDSDYSPGLNHMTSLYTNVTTFS*EEQGVS
Trigger: GCTTACGCCTTGTTCTTCTCAAGAGAAAGTTGTAAC...ATTAGTATACAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp GAATATGCGATCACTGATGGGTTCCAACCCATTTTCACACGATTTCGTAGTTCCTCAGGTTTTGCAACATaGTCTCTATTAACTTCTGTT +
Preference number: 4 (lower is better)
Translates to: EYAITDGFQPIFTRFRSSSGFAT*SLLTSV
Trigger: AACAGAAGTTAATAGAGAGCATGTTGCAAAACCTGA...GGAACTACGAAATCGTGTGAAAATGGGTTGGAACCCATCAGTGATCGCATATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp CTCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTTCAGGTTTTGCAACATaGTCTCTATTAACTTCTGTT +
Preference number: 4 (lower is better)
Translates to: LKQTLINEYAITDGFQPISGFAT*SLLTSV
Trigger: AACAGAAGTTAATAGAGAGCATGTTGCAAAACCTGA...AATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp CTCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTATTGGGAATTATACCTaGTTCAGTAACAACCACATT +
Preference number: 4 (lower is better)
Translates to: LKQTLINEYAITDGFQPIIGNYT*FSNNHI
Trigger: AATGTGGTTGTTACTGAAGCAGGTATAATTCCCAAT...AATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
CDS-3UTR GCA 90 bp GAATATGCGATCACTGATGGGTTCCAACCCATTTTCACACGATTTCGTAGTTCCGTTATTATACTTCCATaGCACTTTCTTTTCTGGTAC +
Preference number: 4 (lower is better)
Translates to: EYAITDGFQPIFTRFRSSVIILP*HFLFWY
Trigger: GTACCAGAAAAGAAAGTGGCATGGAAGTATAATAAC...GGAACTACGAAATCGTGTGAAAATGGGTTGGAACCCATCAGTGATCGCATATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp AACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAACCCTCAAATTACTTTAATATTTaGCTCAAGGGGGAGCTTACA +
Preference number: 4 (lower is better)
Translates to: NHLCLVGKRGTTLISEPSNYFNI*LKGELT
Trigger: TGTAAGCTCCCCCTTGAGGCAAATATTAAAGTAATT...TGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp ACATACTCCCGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCGAACCCTCAGAGAGCTaGTTCTCATTATATAGGCAA +
Preference number: 4 (lower is better)
Translates to: TYSRRVDNNFICIVHFICEPSES*FSLYRQ
Trigger: TTGCCTATATAATGAGAAGCAGCTCTCTGAGGGTTC...GCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCGGGAGTATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp ACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGTATACTAATGAACCCTCAGAGAGCTaGTTCTCATTATATAGGCAA +
Preference number: 4 (lower is better)
Translates to: TDSDYSPGLNHMTSLYTNEPSES*FSLYRQ
Trigger: TTGCCTATATAATGAGAAGCAGCTCTCTGAGGGTTC...ATTAGTATACAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp ACATACTCCCGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCAACTTTGCAACTATCTaGCTCCAGTGTCAATCCCAA +
Preference number: 4 (lower is better)
Translates to: TYSRRVDNNFICIVHFICNFATI*LQCQSQ
Trigger: TTGGGATTGACACTGGAGGCAGATAGTTGCAAAGTT...GCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCGGGAGTATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp CGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCTTGAAGTTTGCCAGGATTGGCAGTTaGTTGGTGATACATCACAAC +
Preference number: 4 (lower is better)
Translates to: RRVDNNFICIVHFICLKFARIGS*LVIHHN
Trigger: GTTGTGATGTATCACCAACCAACTGCCAATCCTGGC...AAACTTCAAGCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS-3UTR CCA 90 bp GCATTGAAGAAACTAGGAGATAAGACAGAAAGGAGCCACCATTTTCTATCTCAACTGATGGGTGTCTCCTaGTTGATTTGTAAGATAAGG +
Preference number: 4 (lower is better)
Translates to: ALKKLGDKTERSHHFLSQLMGVS*LICKIR
Trigger: CCTTATCTTACAAATCAACCAGGAGACACCCATCAG...TTGAGATAGAAAATGGTGGCTCCTTTCTGTCTTATCTCCTAGTTTCTTCAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp ACATACTCCCGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCCTGGAACCAAGTCAATaGGTTATTATACTTCCATGC +
Preference number: 4 (lower is better)
Translates to: TYSRRVDNNFICIVHFICLEPSQ*VIILPC
Trigger: GCATGGAAGTATAATAACTCATTGACTTGGTTCCAG...GCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCGGGAGTATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS-3UTR TCA 90 bp ATTACTTTAATATTTGCCTCAAGGGGGAGCTTACAGTTCATCTTGCAGATCCTTCTGGAACCAAGTCAATaGGTTATTATACTTCCATGC +
Preference number: 4 (lower is better)
Translates to: ITLIFASRGSLQFILQILLEPSQ*VIILPC
Trigger: GCATGGAAGTATAATAACTCATTGACTTGGTTCCAG...AAGGATCTGCAAGATGAACTGTAAGCTCCCCCTTGAGGCAAATATTAAAGTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR TCA 90 bp ACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGTATACTAATCTGGAACCAAGTCAATaGGTTATTATACTTCCATGC +
Preference number: 4 (lower is better)
Translates to: TDSDYSPGLNHMTSLYTNLEPSQ*VIILPC
Trigger: GCATGGAAGTATAATAACTCATTGACTTGGTTCCAG...ATTAGTATACAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp ATTACTTTAATATTTGCCTCAAGGGGGAGCTTACAGTTCATCTTGCAGATCCTTTCCAAGCTATTGTTCTaGTGCCATTCCTTATACAGA +
Preference number: 4 (lower is better)
Translates to: ITLIFASRGSLQFILQILSKLLF*CHSLYR
Trigger: TCTGTATAAGGAATGGCATCAGAACAATAGCTTGGA...AAGGATCTGCAAGATGAACTGTAAGCTCCCCCTTGAGGCAAATATTAAAGTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR TCA 90 bp GCATTGAAGAAACTAGGAGATAAGACAGAAAGGAGCCACCATTTTCTATCTCAACTGGTCTCAACCACATaGCCTCTTTGTATACTAATA +
Preference number: 4 (lower is better)
Translates to: ALKKLGDKTERSHHFLSQLVSTT*PLCILI
Trigger: TATTAGTATACAAAGAGGTCATGTGGTTGAGACCAG...TTGAGATAGAAAATGGTGGCTCCTTTCTGTCTTATCTCCTAGTTTCTTCAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp ACATACTCCCGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCCTGGTCTCAACCACATaGCCTCTTTGTATACTAATA +
Preference number: 4 (lower is better)
Translates to: TYSRRVDNNFICIVHFICLVSTT*PLCILI
Trigger: TATTAGTATACAAAGAGGTCATGTGGTTGAGACCAG...GCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCGGGAGTATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp TCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTTTCAGGTTTTGCAACATaGTCTCTATTAACTTCTGTT +
Preference number: 4 (lower is better)
Translates to: SSKPSSMNMRSLMGSNPFSGFAT*SLLTSV
Trigger: AACAGAAGTTAATAGAGAGCATGTTGCAAAACCTGA...AAATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp TCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTTGTTATTATACTTCCATaGCACTTTCTTTTCTGGTAC +
Preference number: 4 (lower is better)
Translates to: SSKPSSMNMRSLMGSNPFVIILP*HFLFWY
Trigger: GTACCAGAAAAGAAAGTGGCATGGAAGTATAATAAC...AAATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp ATTACTTTAATATTTGCCTCAAGGGGGAGCTTACAGTTCATCTTGCAGATCCTTTTCTACAGGGGCTGTTaGATTAATCTCTGGTTCATA +
Preference number: 4 (lower is better)
Translates to: ITLIFASRGSLQFILQILFYRGC*INLWFI
Trigger: TATGAACCAGAGATTAATCCAACAGCCCCTGTAGAA...AAGGATCTGCAAGATGAACTGTAAGCTCCCCCTTGAGGCAAATATTAAAGTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR CCA 90 bp ATCTTGCAGATCCTTTGTGATTTCAAGCCATTCCAAGCTATTGTTCTGATGCCACTTTTATGCAGCATCTaGAAACAACAGGTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: ILQILCDFKPFQAIVLMPLLCSI*KQQVPK
Trigger: TTTTGGAACCTGTTGTTTCCAGATGCTGCATAAAAG...TGGCATCAGAACAATAGCTTGGAATGGCTTGAAATCACAAAGGATCTGCAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR CCA 90 bp GCATTGAAGAAACTAGGAGATAAGACAGAAAGGAGCCACCATTTTCTATCTCAACAGTGTAGACTGGTTTaGACTAGTTTTTGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: ALKKLGDKTERSHHFLSQQCRLV*TSFCSS
Trigger: GGAAGAACAAAAACTAGTCCAAACCAGTCTACACTG...TTGAGATAGAAAATGGTGGCTCCTTTCTGTCTTATCTCCTAGTTTCTTCAATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp GATTTCAAGCCATTCCAAGCTATTGTTCTGATGCCATTCCTTATACAGATCCAGCAAGAACTCTTTATTTaGTTAAAAGGAGCACAGGGA +
Preference number: 4 (lower is better)
Translates to: DFKPFQAIVLMPFLIQIQQELFI*LKGAQG
Trigger: TCCCTGTGCTCCTTTTAACCAAATAAAGAGTTCTTG...CTGGATCTGTATAAGGAATGGCATCAGAACAATAGCTTGGAATGGCTTGAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
CDS-3UTR CCA 90 bp ACATACTCCCGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCTTGTATTCAGGGAATTaGCTCACTCAATTATGGAGG +
Preference number: 4 (lower is better)
Translates to: TYSRRVDNNFICIVHFICLYSGN*LTQLWR
Trigger: CCTCCATAATTGAGTGAGCCAATTCCCTGAATACAA...GCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCGGGAGTATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400127.5
ENST00000400135.5
CDS-3UTR GCA 90 bp GATTTCAAGCCATTCCAAGCTATTGTTCTGATGCCATTCCTTATACAGATCCAGTCAGGTTTTGCAACATaGTCTCTATTAACTTCTGTT +
Preference number: 4 (lower is better)
Translates to: DFKPFQAIVLMPFLIQIQSGFAT*SLLTSV
Trigger: AACAGAAGTTAATAGAGAGCATGTTGCAAAACCTGA...CTGGATCTGTATAAGGAATGGCATCAGAACAATAGCTTGGAATGGCTTGAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR GCA 90 bp ACATACTCCCGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCCTTCCTTTACTTTTATaGAGCATCTGGAAACAACAG +
Preference number: 4 (lower is better)
Translates to: TYSRRVDNNFICIVHFICLPLLL*SIWKQQ
Trigger: CTGTTGTTTCCAGATGCTGCATAAAAGTAAAGGAAG...GCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCGGGAGTATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR GCA 90 bp ATCTTGCAGATCCTTTGTGATTTCAAGCCATTCCAAGCTATTGTTCTGATGCCAGTTATTATACTTCCATaGCACTTTCTTTTCTGGTAC +
Preference number: 4 (lower is better)
Translates to: ILQILCDFKPFQAIVLMPVIILP*HFLFWY
Trigger: GTACCAGAAAAGAAAGTGGCATGGAAGTATAATAAC...TGGCATCAGAACAATAGCTTGGAATGGCTTGAAATCACAAAGGATCTGCAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR GCA 90 bp ATTACTTTAATATTTGCCTCAAGGGGGAGCTTACAGTTCATCTTGCAGATCCTTGCTTACAGTTCATCTTaGAGATCCTTTGTGATTTCA +
Preference number: 4 (lower is better)
Translates to: ITLIFASRGSLQFILQILAYSSS*RSFVIS
Trigger: TGAAATCACAAAGGATCTGCAAGATGAACTGTAAGC...AAGGATCTGCAAGATGAACTGTAAGCTCCCCCTTGAGGCAAATATTAAAGTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR GCA 90 bp GATTTCAAGCCATTCCAAGCTATTGTTCTGATGCCATTCCTTATACAGATCCAGAATTACTTTAATATTTaGCTCAAGGGGGAGCTTACA +
Preference number: 4 (lower is better)
Translates to: DFKPFQAIVLMPFLIQIQNYFNI*LKGELT
Trigger: TGTAAGCTCCCCCTTGAGGCAAATATTAAAGTAATT...CTGGATCTGTATAAGGAATGGCATCAGAACAATAGCTTGGAATGGCTTGAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR GCA 90 bp CGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCTTGAAGTTTAACTTTGCAACTATCTaGCTCCAGTGTCAATCCCAA +
Preference number: 4 (lower is better)
Translates to: RRVDNNFICIVHFICLKFNFATI*LQCQSQ
Trigger: TTGGGATTGACACTGGAGGCAGATAGTTGCAAAGTT...AAACTTCAAGCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp CGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCTTGAAGTTTCTGATGGGTGTCTCCTaGTTGATTTGTAAGATAAGG +
Preference number: 4 (lower is better)
Translates to: RRVDNNFICIVHFICLKFLMGVS*LICKIR
Trigger: CCTTATCTTACAAATCAACCAGGAGACACCCATCAG...AAACTTCAAGCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS-3UTR CCA 90 bp ATTACTTTAATATTTGCCTCAAGGGGGAGCTTACAGTTCATCTTGCAGATCCTTCTTTTATGCAGCATCTaGAAACAACAGGTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: ITLIFASRGSLQFILQILLLCSI*KQQVPK
Trigger: TTTTGGAACCTGTTGTTTCCAGATGCTGCATAAAAG...AAGGATCTGCAAGATGAACTGTAAGCTCCCCCTTGAGGCAAATATTAAAGTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR CCA 90 bp ACATACTCCCGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCATCCACAGTGTAGACTaGTTTGGACTAGTTTTTGTT +
Preference number: 4 (lower is better)
Translates to: TYSRRVDNNFICIVHFICIHSVD*FGLVFV
Trigger: AACAAAAACTAGTCCAAACCAGTCTACACTGTGGAT...GCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCGGGAGTATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS-3UTR CCA 90 bp ACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGTATACTAATATCCACAGTGTAGACTaGTTTGGACTAGTTTTTGTT +
Preference number: 4 (lower is better)
Translates to: TDSDYSPGLNHMTSLYTNIHSVD*FGLVFV
Trigger: AACAAAAACTAGTCCAAACCAGTCTACACTGTGGAT...ATTAGTATACAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR TCA 90 bp CGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCTTGAAGTTTCATTTGCTTGAAGTTTaGAGTTTGGGTGCATCCTTT +
Preference number: 4 (lower is better)
Translates to: RRVDNNFICIVHFICLKFHLLEV*SLGASF
Trigger: AAAGGATGCACCCAAACTTCAAACTTCAAGCAAATG...AAACTTCAAGCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS-3UTR GCA 90 bp ACATACTCCCGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCTCAGGTTTTGCAACATaGTCTCTATTAACTTCTGTT +
Preference number: 4 (lower is better)
Translates to: TYSRRVDNNFICIVHFICSGFAT*SLLTSV
Trigger: AACAGAAGTTAATAGAGAGCATGTTGCAAAACCTGA...GCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCGGGAGTATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS-3UTR GCA 90 bp ATTACTTTAATATTTGCCTCAAGGGGGAGCTTACAGTTCATCTTGCAGATCCTTATTGGGAATTATACCTaGTTCAGTAACAACCACATT +
Preference number: 4 (lower is better)
Translates to: ITLIFASRGSLQFILQILIGNYT*FSNNHI
Trigger: AATGTGGTTGTTACTGAAGCAGGTATAATTCCCAAT...AAGGATCTGCAAGATGAACTGTAAGCTCCCCCTTGAGGCAAATATTAAAGTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR GCA 90 bp ATTACTTTAATATTTGCCTCAAGGGGGAGCTTACAGTTCATCTTGCAGATCCTTGTTATTATACTTCCATaGCACTTTCTTTTCTGGTAC +
Preference number: 4 (lower is better)
Translates to: ITLIFASRGSLQFILQILVIILP*HFLFWY
Trigger: GTACCAGAAAAGAAAGTGGCATGGAAGTATAATAAC...AAGGATCTGCAAGATGAACTGTAAGCTCCCCCTTGAGGCAAATATTAAAGTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR GCA 90 bp ACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGTATACTAATGTTATTATACTTCCATaGCACTTTCTTTTCTGGTAC +
Preference number: 4 (lower is better)
Translates to: TDSDYSPGLNHMTSLYTNVIILP*HFLFWY
Trigger: GTACCAGAAAAGAAAGTGGCATGGAAGTATAATAAC...ATTAGTATACAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR GCA 90 bp GCATTGAAGAAACTAGGAGATAAGACAGAAAGGAGCCACCATTTTCTATCTCAAAATTACTTTAATATTTaGCTCAAGGGGGAGCTTACA +
Preference number: 4 (lower is better)
Translates to: ALKKLGDKTERSHHFLSQNYFNI*LKGELT
Trigger: TGTAAGCTCCCCCTTGAGGCAAATATTAAAGTAATT...TTGAGATAGAAAATGGTGGCTCCTTTCTGTCTTATCTCCTAGTTTCTTCAATGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CCA 90 bp CGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCTTGAAGTTTTTCTACAGGGGCTGTTaGATTAATCTCTGGTTCATA +
Preference number: 4 (lower is better)
Translates to: RRVDNNFICIVHFICLKFFYRGC*INLWFI
Trigger: TATGAACCAGAGATTAATCCAACAGCCCCTGTAGAA...AAACTTCAAGCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS-3UTR CCA 90 bp CGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCTTGAAGTTTCAGTGTAGACTGGTTTaGACTAGTTTTTGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: RRVDNNFICIVHFICLKFQCRLV*TSFCSS
Trigger: GGAAGAACAAAAACTAGTCCAAACCAGTCTACACTG...AAACTTCAAGCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS-3UTR CCA 90 bp CGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCTTGAAGTTTCTTTTATGCAGCATCTaGAAACAACAGGTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: RRVDNNFICIVHFICLKFLLCSI*KQQVPK
Trigger: TTTTGGAACCTGTTGTTTCCAGATGCTGCATAAAAG...AAACTTCAAGCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR CCA 90 bp CGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCTTGAAGTTTCAAGAACTCTTTATTTaGTTAAAAGGAGCACAGGGA +
Preference number: 4 (lower is better)
Translates to: RRVDNNFICIVHFICLKFQELFI*LKGAQG
Trigger: TCCCTGTGCTCCTTTTAACCAAATAAAGAGTTCTTG...AAACTTCAAGCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
3UTR CAA 72 bp AAAGGAATTGCTTCTAACACACATACTCCCGACGTGTaGATAACAACTTTATCTGCATTGTCCATTTCATTT +
Preference number: 4 (lower is better)
Translates to: KGIASNTHTPDV*ITTLSALSISF
Trigger: AAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCGGGAGTATGTGTGTTAGAAGCAATTCCTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS GCA 90 bp GCCCAGCTGCCCGACCCCCTGCGCGCATCGCCTTCGGCCGGGACCTaGCGCCTGCCGCGCCTGTGCCGCGCGTGGATGTGCGGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: AQLPDPLRASPSAGT*RLPRLCRAWMCGAG
Trigger: TCCAGCCCCGCACATCCACGCGCGGCACAGGCGCGGCAGGCGGCAGGTCCCGGCCGAAGGCGATGCGCGCAGGGGGTCGGGCAGCTGGGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS GCA 90 bp GCGAGACCACGCGGCTCATCGCGGCGCGGTGGCAGCAGCAGGTGTTaGGTGGAGCGAGGGCGGCCTCTGCCCAGGGCGCAGCCCGCGACT +
Preference number: 5 (lower is better)
Translates to: ARPRGSSRRGGSSRC*VERGRPLPRAQPAT
Trigger: AGTCGCGGGCTGCGCCCTGGGCAGAGGCCGCCCTCGCTCCACGCAACACCTGCTGCTGCCACCGCGCCGCGATGAGCCGCGTGGTCTCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS CCA 90 bp GCGGCGCCCAGCAGCAGCGAGACCACGCGGCTCATCGCGGCGCGGTaGCAGCAGCAGGTGTTGCGTGGAGCGAGGGCGGCCTCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: AAPSSSETTRLIAAR*QQQVLRGARAASAQ
Trigger: CTGGGCAGAGGCCGCCCTCGCTCCACGCAACACCTGCTGCTGCCACCGCGCCGCGATGAGCCGCGTGGTCTCGCTGCTGCTGGGCGCCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS CCA 90 bp TCGCCTTCGGCCGGGACCTGCCGCCTGCCGCGCCTGTGCCGCGCGTaGATGTGCGGGGCTGGAGTTCAAGACTTCGAGGGTGCGCGTTTG +
Preference number: 5 (lower is better)
Translates to: SPSAGTCRLPRLCRA*MCGAGVQDFEGARL
Trigger: CAAACGCGCACCCTCGAAGTCTTGAACTCCAGCCCCGCACATCCACGCGCGGCACAGGCGCGGCAGGCGGCAGGTCCCGGCCGAAGGCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS CCA 90 bp GACCTGCCGCCTGCCGCGCCTGTGCCGCGCGTGGATGTGCGGGGCTaGAGTTCAAGACTTCGAGGGTGCGCGTTTGGGGGACTGAAGTTA +
Preference number: 5 (lower is better)
Translates to: DLPPAAPVPRVDVRG*SSRLRGCAFGGLKL
Trigger: TAACTTCAGTCCCCCAAACGCGCACCCTCGAAGTCTTGAACTCCAGCCCCGCACATCCACGCGCGGCACAGGCGCGGCAGGCGGCAGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS CCA 90 bp AAGGCCTTGGGAGCTCGCTGGGTCCCCAAGCAGGCCATTCCTGCCTaGGACCACAGAGATCCATCAGGAAGGCAGCCAGAGGAGCGGGGG +
Preference number: 5 (lower is better)
Translates to: KALGARWVPKQAIPA*DHRDPSGRQPEERG
Trigger: CCCCCGCTCCTCTGGCTGCCTTCCTGATGGATCTCTGTGGTCCCAGGCAGGAATGGCCTGCTTGGGGACCCAGCGAGCTCCCAAGGCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400128.5
CDS TCA 90 bp GACCACACCGTTGCGCTTTGCTTCTCTTCCCCGGCCTCTGACAAGTaGGAGGCTGAGCCGGTGCGCCCTGGTCCTGGATCACAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: DHTVALCFSSPASDK*EAEPVRPGPGSQQQ
Trigger: CTGCTGCTGTGATCCAGGACCAGGGCGCACCGGCTCAGCCTCTCACTTGTCAGAGGCCGGGGAAGAGAAGCAAAGCGCAACGGTGTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS GCA 90 bp CTCAAGGCTGAGGAGGACTCCTCCCTCACTCTCACAAGCCAGGCGTaGCTCCTGAAAGCTCACTCGGCTGGACAGTTCATGGAAGTAGGC +
Preference number: 5 (lower is better)
Translates to: LKAEEDSSLTLTSQA*LLKAHSAGQFMEVG
Trigger: GCCTACTTCCATGAACTGTCCAGCCGAGTGAGCTTTCAGGAGGCACGCCTGGCTTGTGAGAGTGAGGGAGGAGTCCTCCTCAGCCTTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS-3UTR CAA 90 bp GGCAAGAGAGGGACCACATTGATTTCAGAACCCTCAGAGAGCTGCTTCTCATTATGGCAGCAGCAGGTGTaGCGTGGAGCGAGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: GKRGTTLISEPSESCFSLWQQQV*RGARAA
Trigger: GGCCGCCCTCGCTCCACGCAACACCTGCTGCTGCCA...TAATGAGAAGCAGCTCTCTGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS-3UTR CAA 90 bp CAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTGCAGCAGGAAAGGCCTaGGGAGCTCGCTGGGTCCCC +
Preference number: 5 (lower is better)
Translates to: QTPNNHLCLVGKRGTTLIAAGKA*GARWVP
Trigger: GGGGACCCAGCGAGCTCCCAAGGCCTTTCCTGCTGC...AATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400128.5
CDS CCA 90 bp GCAGGATTCCTGGTGCAAGTCTCAGAGTCCCAAGACCAGAGAACCTaGGGTCCTGATGTCCTGGAGCTGAGTCAATTTAGAGAGCCAAGC +
Preference number: 5 (lower is better)
Translates to: AGFLVQVSESQDQRT*GPDVLELSQFREPS
Trigger: GCTTGGCTCTCTAAATTGACTCAGCTCCAGGACATCAGGACCCCAGGTTCTCTGGTCTTGGGACTCTGAGACTTGCACCAGGAATCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400128.5
CDS-3UTR CAA 90 bp GGCAAGAGAGGGACCACATTGATTTCAGAACCCTCAGAGAGCTGCTTCTCATTACCACACCGTTGCGCTTaGCTTCTCTTCCCCGGCCTC +
Preference number: 5 (lower is better)
Translates to: GKRGTTLISEPSESCFSLPHRCA*LLFPGL
Trigger: GAGGCCGGGGAAGAGAAGCAAAGCGCAACGGTGTGG...TAATGAGAAGCAGCTCTCTGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS CCA 90 bp GTTTCGGTACTGGGAATTGCTTCCATCAGACCACTGGTAGAGATCTaGGCAGGCACCAGATGTTTGCCCATCTCCATTCCTCCAAAGCCC +
Preference number: 5 (lower is better)
Translates to: VSVLGIASIRPLVEI*AGTRCLPISIPPKP
Trigger: GGGCTTTGGAGGAATGGAGATGGGCAAACATCTGGTGCCTGCCCAGATCTCTACCAGTGGTCTGATGGAAGCAATTCCCAGTACCGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS TCA 90 bp GCAACATGCTCTCTATTAACTTCTGTTCTGCTTCATTCTCAAGGCTaGGGAGGACTCCTCCCTCACTCTCACAAGCCAGGCGTGCCTCCT +
Preference number: 5 (lower is better)
Translates to: ATCSLLTSVLLHSQG*GGLLPHSHKPGVPP
Trigger: AGGAGGCACGCCTGGCTTGTGAGAGTGAGGGAGGAGTCCTCCTCAGCCTTGAGAATGAAGCAGAACAGAAGTTAATAGAGAGCATGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS CCA 90 bp AATCAACGTGCTGGCCCATCCAGTTTCTGGGGAGGGACCACCTCCTaGTCTACAGATGGGCATCTTCTTGTTGTATTCAGGGAATTGGCT +
Preference number: 5 (lower is better)
Translates to: NQRAGPSSFWGGTTS*STDGHLLVVFRELA
Trigger: AGCCAATTCCCTGAATACAACAAGAAGATGCCCATCTGTAGACCAGGAGGTGGTCCCTCCCCAGAAACTGGATGGGCCAGCACGTTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400127.5
ENST00000400135.5
CDS-3UTR CAA 90 bp TGTCTCCACACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGAGCAAAACACACCTTTaGGCCGCTGACCACGCGGCG +
Preference number: 5 (lower is better)
Translates to: CLHTDSDYSPGLNHMTSLSKTHL*AADHAA
Trigger: CGCCGCGTGGTCAGCGGCCAAAAGGTGTGTTTTGCT...CAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGTGTGGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS-3UTR CAA 90 bp TCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACGCAGGCACCAGATGTTaGCCCATCTCCATTCCTCCA +
Preference number: 5 (lower is better)
Translates to: SIPNPEQPSLFSGQERDHAGTRC*PISIPP
Trigger: TGGAGGAATGGAGATGGGCAAACATCTGGTGCCTGC...GTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp CCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGGCAGGCACCAGATGTTaGCCCATCTCCATTCCTCCA +
Preference number: 5 (lower is better)
Translates to: PPVSIPNPEQPSLFSGQEAGTRC*PISIPP
Trigger: TGGAGGAATGGAGATGGGCAAACATCTGGTGCCTGC...CTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS CCA 90 bp ATTCCACTGGTAAAGGTAGGGACCCCCAAGGCCAGGATTGGCAGTTaGTTGGTGATACATCACAACACACTTTTCACTTCCGCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: IPLVKVGTPKARIGS*LVIHHNTLFTSAGR
Trigger: CCTTCCTGCGGAAGTGAAAAGTGTGTTGTGATGTATCACCAACCAACTGCCAATCCTGGCCTTGGGGGTCCCTACCTTTACCAGTGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS-3UTR CAA 90 bp TCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACTCCCTGTCCCGGGTTTaGTCAGGTTTTGCAACATGC +
Preference number: 5 (lower is better)
Translates to: SIPNPEQPSLFSGQERDHSLSRV*SGFATC
Trigger: GCATGTTGCAAAACCTGACAAAACCCGGGACAGGGA...GTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp CCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTCCCTGTCCCGGGTTTaGTCAGGTTTTGCAACATGC +
Preference number: 5 (lower is better)
Translates to: PNPEQPSLFSGQERDHIDSLSRV*SGFATC
Trigger: GCATGTTGCAAAACCTGACAAAACCCGGGACAGGGA...ATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp GCGATCACTGATGGGTTCCAACCCATTTTCACACGATTTCGTAGTTCCTTTCCTGCAGGCACCAGATGTTaGCCCATCTCCATTCCTCCA +
Preference number: 5 (lower is better)
Translates to: AITDGFQPIFTRFRSSFPAGTRC*PISIPP
Trigger: TGGAGGAATGGAGATGGGCAAACATCTGGTGCCTGC...AGGAAAGGAACTACGAAATCGTGTGAAAATGGGTTGGAACCCATCAGTGATCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp TTTGCAACTATCTGCCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTGCAGGCACCAGATGTTaGCCCATCTCCATTCCTCCA +
Preference number: 5 (lower is better)
Translates to: FATICLQCQSQTPNNHLCAGTRC*PISIPP
Trigger: TGGAGGAATGGAGATGGGCAAACATCTGGTGCCTGC...ACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGGCAGATAGTTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp CCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGTTTCGGTACTGGGAATaGCTTCCATCAGACCACTGG +
Preference number: 5 (lower is better)
Translates to: PPVSIPNPEQPSLFSGQEFRYWE*LPSDHW
Trigger: CCAGTGGTCTGATGGAAGCAATTCCCAGTACCGAAA...CTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp CCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGCCCGAACAACCATCTTaGTTTAGTGGGCAAGAGAGG +
Preference number: 5 (lower is better)
Translates to: PPVSIPNPEQPSLFSGQEPEQPS*FSGQER
Trigger: CCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGG...CTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp TCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACCCCGAACAACCATCTTaGTTTAGTGGGCAAGAGAGG +
Preference number: 5 (lower is better)
Translates to: SIPNPEQPSLFSGQERDHPEQPS*FSGQER
Trigger: CCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGG...GTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS CCA 90 bp CCTCCTGGTCTACAGATGGGCATCTTCTTGTTGTATTCAGGGAATTaGCTCACTCAATTATGGAGGCTGAGAAGTCCCACGATCTGCCAT +
Preference number: 5 (lower is better)
Translates to: PPGLQMGIFLLYSGN*LTQLWRLRSPTICH
Trigger: ATGGCAGATCGTGGGACTTCTCAGCCTCCATAATTGAGTGAGCCAATTCCCTGAATACAACAAGAAGATGCCCATCTGTAGACCAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400127.5
ENST00000400135.5
CDS CCA 90 bp TCAGCAAAACACACCTTTTGGCCAGGGAATTGGCTCACTCAATTATaGAGGCTGAGAAGTCCCACGATCTGCCATCTTCAAGCTGGAGAA +
Preference number: 5 (lower is better)
Translates to: SAKHTFWPGNWLTQL*RLRSPTICHLQAGE
Trigger: TTCTCCAGCTTGAAGATGGCAGATCGTGGGACTTCTCAGCCTCCATAATTGAGTGAGCCAATTCCCTGGCCAAAAGGTGTGTTTTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400128.5
CDS-3UTR CAA 90 bp ACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGTATACTAATAGCAGAAGCCCCGGCTaGGACCACACCGTTGCGCTT +
Preference number: 5 (lower is better)
Translates to: TDSDYSPGLNHMTSLYTNSRSPG*DHTVAL
Trigger: AAGCGCAACGGTGTGGTCCAAGCCGGGGCTTCTGCT...ATTAGTATACAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS-3UTR CAA 90 bp AACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAACCCTCAGCAGGCACCAGATGTTaGCCCATCTCCATTCCTCCA +
Preference number: 5 (lower is better)
Translates to: NHLCLVGKRGTTLISEPSAGTRC*PISIPP
Trigger: TGGAGGAATGGAGATGGGCAAACATCTGGTGCCTGC...TGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp GGCAAGAGAGGGACCACATTGATTTCAGAACCCTCAGAGAGCTGCTTCTCATTATTTCGGTACTGGGAATaGCTTCCATCAGACCACTGG +
Preference number: 5 (lower is better)
Translates to: GKRGTTLISEPSESCFSLFRYWE*LPSDHW
Trigger: CCAGTGGTCTGATGGAAGCAATTCCCAGTACCGAAA...TAATGAGAAGCAGCTCTCTGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp GGCAAGAGAGGGACCACATTGATTTCAGAACCCTCAGAGAGCTGCTTCTCATTAGGCCAGGATTGGCAGTaGGTTGGTGATACATCACAA +
Preference number: 5 (lower is better)
Translates to: GKRGTTLISEPSESCFSLGQDWQ*VGDTSQ
Trigger: TTGTGATGTATCACCAACCAACTGCCAATCCTGGCC...TAATGAGAAGCAGCTCTCTGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp GGCAAGAGAGGGACCACATTGATTTCAGAACCCTCAGAGAGCTGCTTCTCATTACCCGAACAACCATCTTaGTTTAGTGGGCAAGAGAGG +
Preference number: 5 (lower is better)
Translates to: GKRGTTLISEPSESCFSLPEQPS*FSGQER
Trigger: CCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGG...TAATGAGAAGCAGCTCTCTGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp AACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAACCCTCATCCCTGTCCCGGGTTTaGTCAGGTTTTGCAACATGC +
Preference number: 5 (lower is better)
Translates to: NHLCLVGKRGTTLISEPSSLSRV*SGFATC
Trigger: GCATGTTGCAAAACCTGACAAAACCCGGGACAGGGA...TGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp TTTGCAACTATCTGCCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTTTTCGGTACTGGGAATaGCTTCCATCAGACCACTGG +
Preference number: 5 (lower is better)
Translates to: FATICLQCQSQTPNNHLCFRYWE*LPSDHW
Trigger: CCAGTGGTCTGATGGAAGCAATTCCCAGTACCGAAA...ACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGGCAGATAGTTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp TGTCTCCACACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGTTTCGGTACTGGGAATaGCTTCCATCAGACCACTGG +
Preference number: 5 (lower is better)
Translates to: CLHTDSDYSPGLNHMTSLFRYWE*LPSDHW
Trigger: CCAGTGGTCTGATGGAAGCAATTCCCAGTACCGAAA...CAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGTGTGGAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp GCGATCACTGATGGGTTCCAACCCATTTTCACACGATTTCGTAGTTCCTTTCCTTTTCGGTACTGGGAATaGCTTCCATCAGACCACTGG +
Preference number: 5 (lower is better)
Translates to: AITDGFQPIFTRFRSSFPFRYWE*LPSDHW
Trigger: CCAGTGGTCTGATGGAAGCAATTCCCAGTACCGAAA...AGGAAAGGAACTACGAAATCGTGTGAAAATGGGTTGGAACCCATCAGTGATCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp GCGATCACTGATGGGTTCCAACCCATTTTCACACGATTTCGTAGTTCCTTTCCTCCCGAACAACCATCTTaGTTTAGTGGGCAAGAGAGG +
Preference number: 5 (lower is better)
Translates to: AITDGFQPIFTRFRSSFPPEQPS*FSGQER
Trigger: CCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGG...AGGAAAGGAACTACGAAATCGTGTGAAAATGGGTTGGAACCCATCAGTGATCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp ATCTTGCAGATCCTTTGTGATTTCAAGCCATTCCAAGCTATTGTTCTGATGCCAGCAGGCACCAGATGTTaGCCCATCTCCATTCCTCCA +
Preference number: 5 (lower is better)
Translates to: ILQILCDFKPFQAIVLMPAGTRC*PISIPP
Trigger: TGGAGGAATGGAGATGGGCAAACATCTGGTGCCTGC...TGGCATCAGAACAATAGCTTGGAATGGCTTGAAATCACAAAGGATCTGCAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR CAA 90 bp GAATATGCGATCACTGATGGGTTCCAACCCATTTTCACACGATTTCGTAGTTCCTTTCGGTACTGGGAATaGCTTCCATCAGACCACTGG +
Preference number: 5 (lower is better)
Translates to: EYAITDGFQPIFTRFRSSFRYWE*LPSDHW
Trigger: CCAGTGGTCTGATGGAAGCAATTCCCAGTACCGAAA...GGAACTACGAAATCGTGTGAAAATGGGTTGGAACCCATCAGTGATCGCATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp CCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAAGGCCAGGATTGGCAGTaGGTTGGTGATACATCACAA +
Preference number: 5 (lower is better)
Translates to: PNNHLCLVGKRGTTLISEGQDWQ*VGDTSQ
Trigger: TTGTGATGTATCACCAACCAACTGCCAATCCTGGCC...TTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp GAATATGCGATCACTGATGGGTTCCAACCCATTTTCACACGATTTCGTAGTTCCGGCCAGGATTGGCAGTaGGTTGGTGATACATCACAA +
Preference number: 5 (lower is better)
Translates to: EYAITDGFQPIFTRFRSSGQDWQ*VGDTSQ
Trigger: TTGTGATGTATCACCAACCAACTGCCAATCCTGGCC...GGAACTACGAAATCGTGTGAAAATGGGTTGGAACCCATCAGTGATCGCATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp AACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAACCCTCACCCGAACAACCATCTTaGTTTAGTGGGCAAGAGAGG +
Preference number: 5 (lower is better)
Translates to: NHLCLVGKRGTTLISEPSPEQPS*FSGQER
Trigger: CCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGG...TGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp GCGATCACTGATGGGTTCCAACCCATTTTCACACGATTTCGTAGTTCCTTTCCTAGCAAAACACACCTTTaGGCAGTTCTGGAGGCTAGA +
Preference number: 5 (lower is better)
Translates to: AITDGFQPIFTRFRSSFPSKTHL*AVLEAR
Trigger: TCTAGCCTCCAGAACTGCCAAAAGGTGTGTTTTGCT...AGGAAAGGAACTACGAAATCGTGTGAAAATGGGTTGGAACCCATCAGTGATCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400127.5
ENST00000400135.5
CDS-3UTR CAA 90 bp AACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAACCCTCAAGCAAAACACACCTTTaGGCCAGGGAATTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: NHLCLVGKRGTTLISEPSSKTHL*ARELAH
Trigger: GTGAGCCAATTCCCTGGCCAAAAGGTGTGTTTTGCT...TGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400128.5
ENST00000400131.5
CDS-3UTR CAA 90 bp CAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTAGGATTGGCAGTTGGTaGGTGATACATCACAACACA +
Preference number: 5 (lower is better)
Translates to: QTPNNHLCLVGKRGTTLIRIGSW*VIHHNT
Trigger: TGTGTTGTGATGTATCACCAACCAACTGCCAATCCT...AATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp CCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATATGGGTGTCTCCTGGTaGATTTGTAAGATAAGGCTT +
Preference number: 5 (lower is better)
Translates to: PNPEQPSLFSGQERDHIDMGVSW*ICKIRL
Trigger: AAGCCTTATCTTACAAATCAACCAGGAGACACCCAT...ATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp CCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGCTTACAGTTCATCTaGCAGATCCTTTGTGATTTC +
Preference number: 5 (lower is better)
Translates to: PPVSIPNPEQPSLFSGQESLQFI*QILCDF
Trigger: GAAATCACAAAGGATCTGCAAGATGAACTGTAAGCT...CTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp CCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGGTCCATTTCATTTGCTaGAAGTTTGAAGTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: PPVSIPNPEQPSLFSGQEVHFIC*KFEVWV
Trigger: CACCCAAACTTCAAACTTCAAGCAAATGAAATGGAC...CTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp GAATATGCGATCACTGATGGGTTCCAACCCATTTTCACACGATTTCGTAGTTCCAAGAGAGGGACCACATaGATTTCAGAACCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: EYAITDGFQPIFTRFRSSKRGTT*ISEPSE
Trigger: CTCTGAGGGTTCTGAAATCAATGTGGTCCCTCTCTT...GGAACTACGAAATCGTGTGAAAATGGGTTGGAACCCATCAGTGATCGCATATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp AACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAACCCTCAAAGAGAGGGACCACATaGATTTCAGAACCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: NHLCLVGKRGTTLISEPSKRGTT*ISEPSE
Trigger: CTCTGAGGGTTCTGAAATCAATGTGGTCCCTCTCTT...TGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp GGCAAGAGAGGGACCACATTGATTTCAGAACCCTCAGAGAGCTGCTTCTCATTAAACCTTAGACTAACTTaGCAACTATCTGCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: GKRGTTLISEPSESCFSLNLRLT*QLSASS
Trigger: ACTGGAGGCAGATAGTTGCAAAGTTAGTCTAAGGTT...TAATGAGAAGCAGCTCTCTGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp CCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATAACCTTAGACTAACTTaGCAACTATCTGCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: PNPEQPSLFSGQERDHIDNLRLT*QLSASS
Trigger: ACTGGAGGCAGATAGTTGCAAAGTTAGTCTAAGGTT...ATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp GATTTCAAGCCATTCCAAGCTATTGTTCTGATGCCATTCCTTATACAGATCCAGAGCAAAACACACCTTTaGGCTGTGTGCCGAACCTGC +
Preference number: 5 (lower is better)
Translates to: DFKPFQAIVLMPFLIQIQSKTHL*AVCRTC
Trigger: GCAGGTTCGGCACACAGCCAAAAGGTGTGTTTTGCT...CTGGATCTGTATAAGGAATGGCATCAGAACAATAGCTTGGAATGGCTTGAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543733.5
CDS-3UTR CAA 90 bp CGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCTTGAAGTTTGCTTGGACCACACCGTaGCGCTTTGCTTCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: RRVDNNFICIVHFICLKFAWTTP*RFASLP
Trigger: GGGAAGAGAAGCAAAGCGCAACGGTGTGGTCCAAGC...AAACTTCAAGCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS-3UTR CAA 90 bp ACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGTATACTAATTCCCTGTCCCGGGTTTaGTCAGGTTTTGCAACATGC +
Preference number: 5 (lower is better)
Translates to: TDSDYSPGLNHMTSLYTNSLSRV*SGFATC
Trigger: GCATGTTGCAAAACCTGACAAAACCCGGGACAGGGA...ATTAGTATACAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp GCATTGAAGAAACTAGGAGATAAGACAGAAAGGAGCCACCATTTTCTATCTCAATCCCTGTCCCGGGTTTaGTCAGGTTTTGCAACATGC +
Preference number: 5 (lower is better)
Translates to: ALKKLGDKTERSHHFLSQSLSRV*SGFATC
Trigger: GCATGTTGCAAAACCTGACAAAACCCGGGACAGGGA...TTGAGATAGAAAATGGTGGCTCCTTTCTGTCTTATCTCCTAGTTTCTTCAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp ATTACTTTAATATTTGCCTCAAGGGGGAGCTTACAGTTCATCTTGCAGATCCTTTCCCTGTCCCGGGTTTaGTCAGGTTTTGCAACATGC +
Preference number: 5 (lower is better)
Translates to: ITLIFASRGSLQFILQILSLSRV*SGFATC
Trigger: GCATGTTGCAAAACCTGACAAAACCCGGGACAGGGA...AAGGATCTGCAAGATGAACTGTAAGCTCCCCCTTGAGGCAAATATTAAAGTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR CAA 90 bp ATCTTGCAGATCCTTTGTGATTTCAAGCCATTCCAAGCTATTGTTCTGATGCCATTTCGGTACTGGGAATaGCTTCCATCAGACCACTGG +
Preference number: 5 (lower is better)
Translates to: ILQILCDFKPFQAIVLMPFRYWE*LPSDHW
Trigger: CCAGTGGTCTGATGGAAGCAATTCCCAGTACCGAAA...TGGCATCAGAACAATAGCTTGGAATGGCTTGAAATCACAAAGGATCTGCAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR CAA 90 bp GAATATGCGATCACTGATGGGTTCCAACCCATTTTCACACGATTTCGTAGTTCCAGGATTGGCAGTTGGTaGGTGATACATCACAACACA +
Preference number: 5 (lower is better)
Translates to: EYAITDGFQPIFTRFRSSRIGSW*VIHHNT
Trigger: TGTGTTGTGATGTATCACCAACCAACTGCCAATCCT...GGAACTACGAAATCGTGTGAAAATGGGTTGGAACCCATCAGTGATCGCATATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp CTCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTAGGATTGGCAGTTGGTaGGTGATACATCACAACACA +
Preference number: 5 (lower is better)
Translates to: LKQTLINEYAITDGFQPIRIGSW*VIHHNT
Trigger: TGTGTTGTGATGTATCACCAACCAACTGCCAATCCT...AATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp GCGATCACTGATGGGTTCCAACCCATTTTCACACGATTTCGTAGTTCCTTTCCTATGGGTGTCTCCTGGTaGATTTGTAAGATAAGGCTT +
Preference number: 5 (lower is better)
Translates to: AITDGFQPIFTRFRSSFPMGVSW*ICKIRL
Trigger: AAGCCTTATCTTACAAATCAACCAGGAGACACCCAT...AGGAAAGGAACTACGAAATCGTGTGAAAATGGGTTGGAACCCATCAGTGATCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp GGCAAGAGAGGGACCACATTGATTTCAGAACCCTCAGAGAGCTGCTTCTCATTAAGCTTACAGTTCATCTaGCAGATCCTTTGTGATTTC +
Preference number: 5 (lower is better)
Translates to: GKRGTTLISEPSESCFSLSLQFI*QILCDF
Trigger: GAAATCACAAAGGATCTGCAAGATGAACTGTAAGCT...TAATGAGAAGCAGCTCTCTGAGGGTTCTGAAATCAATGTGGTCCCTCTCTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp CCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATGTCCATTTCATTTGCTaGAAGTTTGAAGTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: PNPEQPSLFSGQERDHIDVHFIC*KFEVWV
Trigger: CACCCAAACTTCAAACTTCAAGCAAATGAAATGGAC...ATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp TTTGCAACTATCTGCCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTCATACTCCCGACGTGTaGATAACAACTTTATCTGCA +
Preference number: 5 (lower is better)
Translates to: FATICLQCQSQTPNNHLCHTPDV*ITTLSA
Trigger: TGCAGATAAAGTTGTTATCAACACGTCGGGAGTATG...ACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGGCAGATAGTTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp TGTCTCCACACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGCATACTCCCGACGTGTaGATAACAACTTTATCTGCA +
Preference number: 5 (lower is better)
Translates to: CLHTDSDYSPGLNHMTSLHTPDV*ITTLSA
Trigger: TGCAGATAAAGTTGTTATCAACACGTCGGGAGTATG...CAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGTGTGGAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp CCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGACATGTCTTGCACAATaGAAATTAGACAATCCTTGC +
Preference number: 5 (lower is better)
Translates to: PPVSIPNPEQPSLFSGQETCLAQ*KLDNPC
Trigger: GCAAGGATTGTCTAATTTCAATTGTGCAAGACATGT...CTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp TGTCTCCACACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGAACCTTAGACTAACTTaGCAACTATCTGCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: CLHTDSDYSPGLNHMTSLNLRLT*QLSASS
Trigger: ACTGGAGGCAGATAGTTGCAAAGTTAGTCTAAGGTT...CAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGTGTGGAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp TTTGCAACTATCTGCCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTAACCTTAGACTAACTTaGCAACTATCTGCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: FATICLQCQSQTPNNHLCNLRLT*QLSASS
Trigger: ACTGGAGGCAGATAGTTGCAAAGTTAGTCTAAGGTT...ACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGGCAGATAGTTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp CAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTAACCTTAGACTAACTTaGCAACTATCTGCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: QTPNNHLCLVGKRGTTLINLRLT*QLSASS
Trigger: ACTGGAGGCAGATAGTTGCAAAGTTAGTCTAAGGTT...AATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp ACATACTCCCGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCGGCCAGGATTGGCAGTaGGTTGGTGATACATCACAA +
Preference number: 5 (lower is better)
Translates to: TYSRRVDNNFICIVHFICGQDWQ*VGDTSQ
Trigger: TTGTGATGTATCACCAACCAACTGCCAATCCTGGCC...GCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCGGGAGTATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS-3UTR CAA 90 bp CTCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTATGGGTGTCTCCTGGTaGATTTGTAAGATAAGGCTT +
Preference number: 5 (lower is better)
Translates to: LKQTLINEYAITDGFQPIMGVSW*ICKIRL
Trigger: AAGCCTTATCTTACAAATCAACCAGGAGACACCCAT...AATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp CAAACCCCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTAGCTTACAGTTCATCTaGCAGATCCTTTGTGATTTC +
Preference number: 5 (lower is better)
Translates to: QTPNNHLCLVGKRGTTLISLQFI*QILCDF
Trigger: GAAATCACAAAGGATCTGCAAGATGAACTGTAAGCT...AATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp ATTACTTTAATATTTGCCTCAAGGGGGAGCTTACAGTTCATCTTGCAGATCCTTCCCGAACAACCATCTTaGTTTAGTGGGCAAGAGAGG +
Preference number: 5 (lower is better)
Translates to: ITLIFASRGSLQFILQILPEQPS*FSGQER
Trigger: CCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGGG...AAGGATCTGCAAGATGAACTGTAAGCTCCCCCTTGAGGCAAATATTAAAGTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
CDS-3UTR CAA 90 bp CGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCTTGAAGTTTTCCCTGTCCCGGGTTTaGTCAGGTTTTGCAACATGC +
Preference number: 5 (lower is better)
Translates to: RRVDNNFICIVHFICLKFSLSRV*SGFATC
Trigger: GCATGTTGCAAAACCTGACAAAACCCGGGACAGGGA...AAACTTCAAGCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS-3UTR CAA 90 bp CTCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTGTCCATTTCATTTGCTaGAAGTTTGAAGTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: LKQTLINEYAITDGFQPIVHFIC*KFEVWV
Trigger: CACCCAAACTTCAAACTTCAAGCAAATGAAATGGAC...AATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp CCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAAGTCCATTTCATTTGCTaGAAGTTTGAAGTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: PNNHLCLVGKRGTTLISEVHFIC*KFEVWV
Trigger: CACCCAAACTTCAAACTTCAAGCAAATGAAATGGAC...TTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp TCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTTCATACTCCCGACGTGTaGATAACAACTTTATCTGCA +
Preference number: 5 (lower is better)
Translates to: SSKPSSMNMRSLMGSNPFHTPDV*ITTLSA
Trigger: TGCAGATAAAGTTGTTATCAACACGTCGGGAGTATG...AAATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp TTTGCAACTATCTGCCTCCAGTGTCAATCCCAAACCCCGAACAACCATCTTTGTACATGTCTTGCACAATaGAAATTAGACAATCCTTGC +
Preference number: 5 (lower is better)
Translates to: FATICLQCQSQTPNNHLCTCLAQ*KLDNPC
Trigger: GCAAGGATTGTCTAATTTCAATTGTGCAAGACATGT...ACAAAGATGGTTGTTCGGGGTTTGGGATTGACACTGGAGGCAGATAGTTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp ACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGTATACTAATAAGAGAGGGACCACATaGATTTCAGAACCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: TDSDYSPGLNHMTSLYTNKRGTT*ISEPSE
Trigger: CTCTGAGGGTTCTGAAATCAATGTGGTCCCTCTCTT...ATTAGTATACAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp ACATACTCCCGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCAAGAGAGGGACCACATaGATTTCAGAACCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: TYSRRVDNNFICIVHFICKRGTT*ISEPSE
Trigger: CTCTGAGGGTTCTGAAATCAATGTGGTCCCTCTCTT...GCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCGGGAGTATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp ACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGTATACTAATAGCAAAACACACCTTTaGGCAGTTCTGGAGGCTAGA +
Preference number: 5 (lower is better)
Translates to: TDSDYSPGLNHMTSLYTNSKTHL*AVLEAR
Trigger: TCTAGCCTCCAGAACTGCCAAAAGGTGTGTTTTGCT...ATTAGTATACAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400127.5
ENST00000400135.5
CDS-3UTR CAA 90 bp ACATACTCCCGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCAGGATTGGCAGTTGGTaGGTGATACATCACAACACA +
Preference number: 5 (lower is better)
Translates to: TYSRRVDNNFICIVHFICRIGSW*VIHHNT
Trigger: TGTGTTGTGATGTATCACCAACCAACTGCCAATCCT...GCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCGGGAGTATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS-3UTR CAA 90 bp ATTACTTTAATATTTGCCTCAAGGGGGAGCTTACAGTTCATCTTGCAGATCCTTAGGATTGGCAGTTGGTaGGTGATACATCACAACACA +
Preference number: 5 (lower is better)
Translates to: ITLIFASRGSLQFILQILRIGSW*VIHHNT
Trigger: TGTGTTGTGATGTATCACCAACCAACTGCCAATCCT...AAGGATCTGCAAGATGAACTGTAAGCTCCCCCTTGAGGCAAATATTAAAGTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR CAA 90 bp TCAAGCAAACCCTCATCAATGAATATGCGATCACTGATGGGTTCCAACCCATTTAGCTTACAGTTCATCTaGCAGATCCTTTGTGATTTC +
Preference number: 5 (lower is better)
Translates to: SSKPSSMNMRSLMGSNPFSLQFI*QILCDF
Trigger: GAAATCACAAAGGATCTGCAAGATGAACTGTAAGCT...AAATGGGTTGGAACCCATCAGTGATCGCATATTCATTGATGAGGGTTTGCTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp ATCTTGCAGATCCTTTGTGATTTCAAGCCATTCCAAGCTATTGTTCTGATGCCACATACTCCCGACGTGTaGATAACAACTTTATCTGCA +
Preference number: 5 (lower is better)
Translates to: ILQILCDFKPFQAIVLMPHTPDV*ITTLSA
Trigger: TGCAGATAAAGTTGTTATCAACACGTCGGGAGTATG...TGGCATCAGAACAATAGCTTGGAATGGCTTGAAATCACAAAGGATCTGCAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR CAA 90 bp CCGAACAACCATCTTTGTTTAGTGGGCAAGAGAGGGACCACATTGATTTCAGAAACATGTCTTGCACAATaGAAATTAGACAATCCTTGC +
Preference number: 5 (lower is better)
Translates to: PNNHLCLVGKRGTTLISETCLAQ*KLDNPC
Trigger: GCAAGGATTGTCTAATTTCAATTGTGCAAGACATGT...TTCTGAAATCAATGTGGTCCCTCTCTTGCCCACTAAACAAAGATGGTTGTTCGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp CGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCTTGAAGTTTAGCAAAACACACCTTTaGGCCAGGGAATTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: RRVDNNFICIVHFICLKFSKTHL*ARELAH
Trigger: GTGAGCCAATTCCCTGGCCAAAAGGTGTGTTTTGCT...AAACTTCAAGCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400128.5
ENST00000400131.5
CDS-3UTR CAA 90 bp GCATTGAAGAAACTAGGAGATAAGACAGAAAGGAGCCACCATTTTCTATCTCAAATGGGTGTCTCCTGGTaGATTTGTAAGATAAGGCTT +
Preference number: 5 (lower is better)
Translates to: ALKKLGDKTERSHHFLSQMGVSW*ICKIRL
Trigger: AAGCCTTATCTTACAAATCAACCAGGAGACACCCAT...TTGAGATAGAAAATGGTGGCTCCTTTCTGTCTTATCTCCTAGTTTCTTCAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp GATTTCAAGCCATTCCAAGCTATTGTTCTGATGCCATTCCTTATACAGATCCAGAGCTTACAGTTCATCTaGCAGATCCTTTGTGATTTC +
Preference number: 5 (lower is better)
Translates to: DFKPFQAIVLMPFLIQIQSLQFI*QILCDF
Trigger: GAAATCACAAAGGATCTGCAAGATGAACTGTAAGCT...CTGGATCTGTATAAGGAATGGCATCAGAACAATAGCTTGGAATGGCTTGAAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR CAA 90 bp CGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCTTGAAGTTTAGGATTGGCAGTTGGTaGGTGATACATCACAACACA +
Preference number: 5 (lower is better)
Translates to: RRVDNNFICIVHFICLKFRIGSW*VIHHNT
Trigger: TGTGTTGTGATGTATCACCAACCAACTGCCAATCCT...AAACTTCAAGCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS-3UTR CAA 90 bp ATTACTTTAATATTTGCCTCAAGGGGGAGCTTACAGTTCATCTTGCAGATCCTTAGCTTACAGTTCATCTaGCAGATCCTTTGTGATTTC +
Preference number: 5 (lower is better)
Translates to: ITLIFASRGSLQFILQILSLQFI*QILCDF
Trigger: GAAATCACAAAGGATCTGCAAGATGAACTGTAAGCT...AAGGATCTGCAAGATGAACTGTAAGCTCCCCCTTGAGGCAAATATTAAAGTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299295.7
ENST00000400127.5
ENST00000400128.5
ENST00000543733.5
CDS-3UTR CAA 90 bp ACTGATAGTGACTATTCACCTGGTCTCAACCACATGACCTCTTTGTATACTAATGTCCATTTCATTTGCTaGAAGTTTGAAGTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: TDSDYSPGLNHMTSLYTNVHFIC*KFEVWV
Trigger: CACCCAAACTTCAAACTTCAAGCAAATGAAATGGAC...ATTAGTATACAAAGAGGTCATGTGGTTGAGACCAGGTGAATAGTCACTATCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp CGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCTTGAAGTTTATGGGTGTCTCCTGGTaGATTTGTAAGATAAGGCTT +
Preference number: 5 (lower is better)
Translates to: RRVDNNFICIVHFICLKFMGVSW*ICKIRL
Trigger: AAGCCTTATCTTACAAATCAACCAGGAGACACCCAT...AAACTTCAAGCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS-3UTR CAA 90 bp CGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCTTGAAGTTTCATACTCCCGACGTGTaGATAACAACTTTATCTGCA +
Preference number: 5 (lower is better)
Translates to: RRVDNNFICIVHFICLKFHTPDV*ITTLSA
Trigger: TGCAGATAAAGTTGTTATCAACACGTCGGGAGTATG...AAACTTCAAGCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS-3UTR CAA 90 bp GCATTGAAGAAACTAGGAGATAAGACAGAAAGGAGCCACCATTTTCTATCTCAAACATGTCTTGCACAATaGAAATTAGACAATCCTTGC +
Preference number: 5 (lower is better)
Translates to: ALKKLGDKTERSHHFLSQTCLAQ*KLDNPC
Trigger: GCAAGGATTGTCTAATTTCAATTGTGCAAGACATGT...TTGAGATAGAAAATGGTGGCTCCTTTCTGTCTTATCTCCTAGTTTCTTCAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp ACATACTCCCGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCACATGTCTTGCACAATaGAAATTAGACAATCCTTGC +
Preference number: 5 (lower is better)
Translates to: TYSRRVDNNFICIVHFICTCLAQ*KLDNPC
Trigger: GCAAGGATTGTCTAATTTCAATTGTGCAAGACATGT...GCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCGGGAGTATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS-3UTR CAA 90 bp CGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCTTGAAGTTTAACCTTAGACTAACTTaGCAACTATCTGCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: RRVDNNFICIVHFICLKFNLRLT*QLSASS
Trigger: ACTGGAGGCAGATAGTTGCAAAGTTAGTCTAAGGTT...AAACTTCAAGCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
CDS-3UTR CAA 90 bp CGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCTTGAAGTTTAGCTTACAGTTCATCTaGCAGATCCTTTGTGATTTC +
Preference number: 5 (lower is better)
Translates to: RRVDNNFICIVHFICLKFSLQFI*QILCDF
Trigger: GAAATCACAAAGGATCTGCAAGATGAACTGTAAGCT...AAACTTCAAGCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS-3UTR CAA 90 bp CGACGTGTTGATAACAACTTTATCTGCATTGTCCATTTCATTTGCTTGAAGTTTGTCCATTTCATTTGCTaGAAGTTTGAAGTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: RRVDNNFICIVHFICLKFVHFIC*KFEVWV
Trigger: CACCCAAACTTCAAACTTCAAGCAAATGAAATGGAC...AAACTTCAAGCAAATGAAATGGACAATGCAGATAAAGTTGTTATCAACACGTCG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS GCA 72 bp CCCTGCGCGCATCGCCTTCGGCCGGGACCTGCCGCCTaGCGCGCCTGTGCCGCGCGTGGATGTGCGGGGCTG +
Preference number: 6 (lower is better)
Translates to: PCAHRLRPGPAA*RACAARGCAGL
Trigger: CAGCCCCGCACATCCACGCGCGGCACAGGCGCGGCAGGCGGCAGGTCCCGGCCGAAGGCGATGCGCGCAGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS GCA 72 bp CCCGACCCCCTGCGCGCATCGCCTTCGGCCGGGACCTaGCGCCTGCCGCGCCTGTGCCGCGCGTGGATGTGC +
Preference number: 6 (lower is better)
Translates to: PDPLRASPSAGT*RLPRLCRAWMC
Trigger: GCACATCCACGCGCGGCACAGGCGCGGCAGGCGGCAGGTCCCGGCCGAAGGCGATGCGCGCAGGGGGTCGGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS CAA 90 bp AGCGAGACCACGCGGCTCATCGCGGCGCGGTGGCAGCAGCAGGTGTaGCGTGGAGCGAGGGCGGCCTCTGCCCAGGGCGCAGCCCGCGAC +
Preference number: 6 (lower is better)
Translates to: SETTRLIAARWQQQV*RGARAASAQGAARD
Trigger: GTCGCGGGCTGCGCCCTGGGCAGAGGCCGCCCTCGCTCCACGCAACACCTGCTGCTGCCACCGCGCCGCGATGAGCCGCGTGGTCTCGCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS CCA 72 bp AGCAGCAGCGAGACCACGCGGCTCATCGCGGCGCGGTaGCAGCAGCAGGTGTTGCGTGGAGCGAGGGCGGCC +
Preference number: 6 (lower is better)
Translates to: SSSETTRLIAAR*QQQVLRGARAA
Trigger: GGCCGCCCTCGCTCCACGCAACACCTGCTGCTGCCACCGCGCCGCGATGAGCCGCGTGGTCTCGCTGCTGCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS CCA 72 bp GGAGCTCGCTGGGTCCCCAAGCAGGCCATTCCTGCCTaGGACCACAGAGATCCATCAGGAAGGCAGCCAGAG +
Preference number: 6 (lower is better)
Translates to: GARWVPKQAIPA*DHRDPSGRQPE
Trigger: CTCTGGCTGCCTTCCTGATGGATCTCTGTGGTCCCAGGCAGGAATGGCCTGCTTGGGGACCCAGCGAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400128.5
CDS CCA 72 bp ATAGAGGAAGCAGCAGGAAAGGCCTTGGGAGCTCGCTaGGTCCCCAAGCAGGCCATTCCTGCCTGGGACCAC +
Preference number: 6 (lower is better)
Translates to: IEEAAGKALGAR*VPKQAIPAWDH
Trigger: GTGGTCCCAGGCAGGAATGGCCTGCTTGGGGACCCAGCGAGCTCCCAAGGCCTTTCCTGCTGCTTCCTCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400128.5
CDS CCA 72 bp CGTGTATGTCCTAGAGGCGAAGCAGAAGCCCCGGCTTaGACCACACCGTTGCGCTTTGCTTCTCTTCCCCGG +
Preference number: 6 (lower is better)
Translates to: RVCPRGEAEAPA*TTPLRFASLPR
Trigger: CCGGGGAAGAGAAGCAAAGCGCAACGGTGTGGTCCAAGCCGGGGCTTCTGCTTCGCCTCTAGGACATACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS CAA 72 bp AGAGGCGAAGCAGAAGCCCCGGCTTGGACCACACCGTaGCGCTTTGCTTCTCTTCCCCGGCCTCTGACAAGT +
Preference number: 6 (lower is better)
Translates to: RGEAEAPAWTTP*RFASLPRPLTS
Trigger: ACTTGTCAGAGGCCGGGGAAGAGAAGCAAAGCGCAACGGTGTGGTCCAAGCCGGGGCTTCTGCTTCGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS CAA 90 bp GTATGTCCTAGAGGCGAAGCAGAAGCCCCGGCTTGGACCACACCGTaGCGCTTTGCTTCTCTTCCCCGGCCTCTGACAAGTGAGAGGCTG +
Preference number: 6 (lower is better)
Translates to: VCPRGEAEAPAWTTP*RFASLPRPLTSERL
Trigger: CAGCCTCTCACTTGTCAGAGGCCGGGGAAGAGAAGCAAAGCGCAACGGTGTGGTCCAAGCCGGGGCTTCTGCTTCGCCTCTAGGACATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299295.7
CDS GCA 72 bp GAGGAGGACTCCTCCCTCACTCTCACAAGCCAGGCGTaGCTCCTGAAAGCTCACTCGGCTGGACAGTTCATG +
Preference number: 6 (lower is better)
Translates to: EEDSSLTLTSQA*LLKAHSAGQFM
Trigger: CATGAACTGTCCAGCCGAGTGAGCTTTCAGGAGGCACGCCTGGCTTGTGAGAGTGAGGGAGGAGTCCTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS GCA 72 bp TTGGCAGTTCTGGAGGCTAGAAGTTCAGAATCAACGTaGTGGCCCATCCAGTTTCTGGGGAGGGACCACCTC +
Preference number: 6 (lower is better)
Translates to: LAVLEARSSEST*WPIQFLGRDHL
Trigger: GAGGTGGTCCCTCCCCAGAAACTGGATGGGCCAGCACGTTGATTCTGAACTTCTAGCCTCCAGAACTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400127.5
ENST00000400135.5
CDS CCA 72 bp CACAAGCCAGGCGTGCCTCCTGAAAGCTCACTCGGCTaGACAGTTCATGGAAGTAGGCCATTTTGTAGCAGG +
Preference number: 6 (lower is better)
Translates to: HKPGVPPESSLG*TVHGSRPFCSR
Trigger: CCTGCTACAAAATGGCCTACTTCCATGAACTGTCCAGCCGAGTGAGCTTTCAGGAGGCACGCCTGGCTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS CCA 72 bp GCTGGCCCATCCAGTTTCTGGGGAGGGACCACCTCCTaGTCTACAGATGGGCATCTTCTTGTTGTATTCAGG +
Preference number: 6 (lower is better)
Translates to: AGPSSFWGGTTS*STDGHLLVVFR
Trigger: CCTGAATACAACAAGAAGATGCCCATCTGTAGACCAGGAGGTGGTCCCTCCCCAGAAACTGGATGGGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400127.5
ENST00000400135.5
CDS CCA 72 bp CTGGGAATTGCTTCCATCAGACCACTGGTAGAGATCTaGGCAGGCACCAGATGTTTGCCCATCTCCATTCCT +
Preference number: 6 (lower is better)
Translates to: LGIASIRPLVEI*AGTRCLPISIP
Trigger: AGGAATGGAGATGGGCAAACATCTGGTGCCTGCCCAGATCTCTACCAGTGGTCTGATGGAAGCAATTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS CCA 72 bp CTGGTGCAAGTCTCAGAGTCCCAAGACCAGAGAACCTaGGGTCCTGATGTCCTGGAGCTGAGTCAATTTAGA +
Preference number: 6 (lower is better)
Translates to: LVQVSESQDQRT*GPDVLELSQFR
Trigger: TCTAAATTGACTCAGCTCCAGGACATCAGGACCCCAGGTTCTCTGGTCTTGGGACTCTGAGACTTGCACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400128.5
CDS CCA 72 bp GAGGCTGAGAAGTCCCACGATCTGCCATCTTCAAGCTaGAGAACCAGGAAAGCCAGTGAAGTAGCTCAGTCT +
Preference number: 6 (lower is better)
Translates to: EAEKSHDLPSSS*RTRKASEVAQS
Trigger: AGACTGAGCTACTTCACTGGCTTTCCTGGTTCTCCAGCTTGAAGATGGCAGATCGTGGGACTTCTCAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400128.5
CDS CAA 72 bp AGACCACTGGTAGAGATCTGGGCAGGCACCAGATGTTaGCCCATCTCCATTCCTCCAAAGCCCTATCCAGAA +
Preference number: 6 (lower is better)
Translates to: RPLVEIWAGTRC*PISIPPKPYPE
Trigger: TTCTGGATAGGGCTTTGGAGGAATGGAGATGGGCAAACATCTGGTGCCTGCCCAGATCTCTACCAGTGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS CAA 90 bp GCTTCCATCAGACCACTGGTAGAGATCTGGGCAGGCACCAGATGTTaGCCCATCTCCATTCCTCCAAAGCCCTATCCAGAAATCACCATC +
Preference number: 6 (lower is better)
Translates to: ASIRPLVEIWAGTRC*PISIPPKPYPEITI
Trigger: GATGGTGATTTCTGGATAGGGCTTTGGAGGAATGGAGATGGGCAAACATCTGGTGCCTGCCCAGATCTCTACCAGTGGTCTGATGGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS CAA 90 bp CCACTGGTAAAGGTAGGGACCCCCAAGGCCAGGATTGGCAGTTGGTaGGTGATACATCACAACACACTTTTCACTTCCGCAGGAAGGTTC +
Preference number: 6 (lower is better)
Translates to: PLVKVGTPKARIGSW*VIHHNTLFTSAGRF
Trigger: GAACCTTCCTGCGGAAGTGAAAAGTGTGTTGTGATGTATCACCAACCAACTGCCAATCCTGGCCTTGGGGGTCCCTACCTTTACCAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS CAA 90 bp CATTCCACTGGTAAAGGTAGGGACCCCCAAGGCCAGGATTGGCAGTaGGTTGGTGATACATCACAACACACTTTTCACTTCCGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: HSTGKGRDPQGQDWQ*VGDTSQHTFHFRRK
Trigger: CTTCCTGCGGAAGTGAAAAGTGTGTTGTGATGTATCACCAACCAACTGCCAATCCTGGCCTTGGGGGTCCCTACCTTTACCAGTGGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS TCA 72 bp TTTGGCCAGGGAATTGGCTCACTCAATTATGGAGGCTaGGAAGTCCCACGATCTGCCATCTTCAAGCTGGAG +
Preference number: 6 (lower is better)
Translates to: FGQGIGSLNYGG*EVPRSAIFKLE
Trigger: CTCCAGCTTGAAGATGGCAGATCGTGGGACTTCTCAGCCTCCATAATTGAGTGAGCCAATTCCCTGGCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400128.5
CDS GCA 72 bp GTCAGCAAAACACACCTTTTGGCTGTGTGCCGAACCTaGAGTCATTACCAAGTATACCTCGGCCCAACTCCA +
Preference number: 6 (lower is better)
Translates to: VSKTHLLAVCRT*SHYQVYLGPTP
Trigger: TGGAGTTGGGCCGAGGTATACTTGGTAATGACTGCAGGTTCGGCACACAGCCAAAAGGTGTGTTTTGCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543733.5
CDS CCA 72 bp CAGTTTCTGGGGAGGGACCACCTCCTGGTCTACAGATaGGCATCTTCTTGTTGTATTCAGGGAATTGGCTCA +
Preference number: 6 (lower is better)
Translates to: QFLGRDHLLVYR*ASSCCIQGIGS
Trigger: TGAGCCAATTCCCTGAATACAACAAGAAGATGCCCATCTGTAGACCAGGAGGTGGTCCCTCCCCAGAAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400127.5
ENST00000400135.5
CDS CAA 72 bp AAGGTAGGGACCCCCAAGGCCAGGATTGGCAGTTGGTaGGTGATACATCACAACACACTTTTCACTTCCGCA +
Preference number: 6 (lower is better)
Translates to: KVGTPKARIGSW*VIHHNTLFTSA
Trigger: TGCGGAAGTGAAAAGTGTGTTGTGATGTATCACCAACCAACTGCCAATCCTGGCCTTGGGGGTCCCTACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS CAA 90 bp GGCCATTTTGTAGCAGGGATGCTTGAAGTCAGCAAAACACACCTTTaGGCAGTTCTGGAGGCTAGAAGTTCAGAATCAACGTGCTGGCCC +
Preference number: 6 (lower is better)
Translates to: GHFVAGMLEVSKTHL*AVLEARSSESTCWP
Trigger: GGGCCAGCACGTTGATTCTGAACTTCTAGCCTCCAGAACTGCCAAAAGGTGTGTTTTGCTGACTTCAAGCATCCCTGCTACAAAATGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400127.5
ENST00000400135.5
CDS TCA 72 bp AAGACCAGAGAACCTGGGGTCCTGATGTCCTGGAGCTaGGTCAATTTAGAGAGCCAAGCAAAACACAGGGAT +
Preference number: 6 (lower is better)
Translates to: KTREPGVLMSWS*VNLESQAKHRD
Trigger: ATCCCTGTGTTTTGCTTGGCTCTCTAAATTGACTCAGCTCCAGGACATCAGGACCCCAGGTTCTCTGGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400128.5
CDS TCA 72 bp CAGTCATTACCAAGTATACCTCGGCCCAACTCCAGCTaGCTTCATTTTCTGGGAAGTCCCCAACTTGGAACG +
Preference number: 6 (lower is better)
Translates to: QSLPSIPRPNSS*LHFLGSPQLGT
Trigger: CGTTCCAAGTTGGGGACTTCCCAGAAAATGAAGTCAGCTGGAGTTGGGCCGAGGTATACTTGGTAATGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543733.5
CDS GCA 72 bp AAGGTTCATCTGTGTACCAGTTTCGGTACTGGGAATTaGTTCCATCAGACCACTGGTAGAGATCTGGGCAGG +
Preference number: 6 (lower is better)
Translates to: KVHLCTSFGTGN*FHQTTGRDLGR
Trigger: CCTGCCCAGATCTCTACCAGTGGTCTGATGGAAGCAATTCCCAGTACCGAAACTGGTACACAGATGAACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS CCA 72 bp GTAAAGGTAGGGACCCCCAAGGCCAGGATTGGCAGTTaGTTGGTGATACATCACAACACACTTTTCACTTCC +
Preference number: 6 (lower is better)
Translates to: VKVGTPKARIGS*LVIHHNTLFTS
Trigger: GGAAGTGAAAAGTGTGTTGTGATGTATCACCAACCAACTGCCAATCCTGGCCTTGGGGGTCCCTACCTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS CCA 72 bp TCCACTGGTAAAGGTAGGGACCCCCAAGGCCAGGATTaGCAGTTGGTTGGTGATACATCACAACACACTTTT +
Preference number: 6 (lower is better)
Translates to: STGKGRDPQGQD*QLVGDTSQHTF
Trigger: AAAAGTGTGTTGTGATGTATCACCAACCAACTGCCAATCCTGGCCTTGGGGGTCCCTACCTTTACCAGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS CCA 72 bp CACACCTTTTGGCCAGGGAATTGGCTCACTCAATTATaGAGGCTGAGAAGTCCCACGATCTGCCATCTTCAA +
Preference number: 6 (lower is better)
Translates to: HTFWPGNWLTQL*RLRSPTICHLQ
Trigger: TTGAAGATGGCAGATCGTGGGACTTCTCAGCCTCCATAATTGAGTGAGCCAATTCCCTGGCCAAAAGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400128.5
ENST00000400131.5
CDS CAA 72 bp GGTAAAGGTAGGGACCCCCAAGGCCAGGATTGGCAGTaGGTTGGTGATACATCACAACACACTTTTCACTTC +
Preference number: 6 (lower is better)
Translates to: GKGRDPQGQDWQ*VGDTSQHTFHF
Trigger: GAAGTGAAAAGTGTGTTGTGATGTATCACCAACCAACTGCCAATCCTGGCCTTGGGGGTCCCTACCTTTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5
CDS CAA 90 bp ACCTCCTGGTCTACAGATGGGCATCTTCTTGTTGTATTCAGGGAATaGGCTCACTCAATTATGGAGGCTGAGAAGTCCCACGATCTGCCA +
Preference number: 6 (lower is better)
Translates to: TSWSTDGHLLVVFRE*AHSIMEAEKSHDLP
Trigger: TGGCAGATCGTGGGACTTCTCAGCCTCCATAATTGAGTGAGCCAATTCCCTGAATACAACAAGAAGATGCCCATCTGTAGACCAGGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400127.5
ENST00000400135.5
CDS CAA 90 bp GGCCATTTTGTAGCAGGGATGCTTGAAGTCAGCAAAACACACCTTTaGGCCAGGGAATTGGCTCACTCAATTATGGAGGCTGAGAAGTCC +
Preference number: 6 (lower is better)
Translates to: GHFVAGMLEVSKTHL*ARELAHSIMEAEKS
Trigger: GGACTTCTCAGCCTCCATAATTGAGTGAGCCAATTCCCTGGCCAAAAGGTGTGTTTTGCTGACTTCAAGCATCCCTGCTACAAAATGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400128.5
ENST00000400131.5
CDS CCA 72 bp TGCTTGAAGTCAGCAAAACACACCTTTTGGCAGTTCTaGAGGCTAGAAGTTCAGAATCAACGTGCTGGCCCA +
Preference number: 6 (lower is better)
Translates to: CLKSAKHTFWQF*RLEVQNQRAGP
Trigger: TGGGCCAGCACGTTGATTCTGAACTTCTAGCCTCCAGAACTGCCAAAAGGTGTGTTTTGCTGACTTCAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400127.5
ENST00000400135.5
CDS CAA 72 bp GTAGCAGGGATGCTTGAAGTCAGCAAAACACACCTTTaGGCCAGGGAATTGGCTCACTCAATTATGGAGGCT +
Preference number: 6 (lower is better)
Translates to: VAGMLEVSKTHL*ARELAHSIMEA
Trigger: AGCCTCCATAATTGAGTGAGCCAATTCCCTGGCCAAAAGGTGTGTTTTGCTGACTTCAAGCATCCCTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400128.5
ENST00000400131.5
CDS CCA 72 bp CTACAGATGGGCATCTTCTTGTTGTATTCAGGGAATTaGCTCACTCAATTATGGAGGCTGAGAAGTCCCACG +
Preference number: 6 (lower is better)
Translates to: LQMGIFLLYSGN*LTQLWRLRSPT
Trigger: CGTGGGACTTCTCAGCCTCCATAATTGAGTGAGCCAATTCCCTGAATACAACAAGAAGATGCCCATCTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400127.5
ENST00000400135.5
CDS CAA 72 bp GTAGCAGGGATGCTTGAAGTCAGCAAAACACACCTTTaGGCAGTTCTGGAGGCTAGAAGTTCAGAATCAACG +
Preference number: 6 (lower is better)
Translates to: VAGMLEVSKTHL*AVLEARSSEST
Trigger: CGTTGATTCTGAACTTCTAGCCTCCAGAACTGCCAAAAGGTGTGTTTTGCTGACTTCAAGCATCCCTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400127.5
ENST00000400135.5
CDS CAA 90 bp AAAGCCCTATCCAGAAATCACCATCAGAAATCCCTGTCCCGGGTTTaGTCAGGTTTTGCAACATGCTCTCTATTAACTTCTGTTCTGCTT +
Preference number: 6 (lower is better)
Translates to: KALSRNHHQKSLSRV*SGFATCSLLTSVLL
Trigger: AAGCAGAACAGAAGTTAATAGAGAGCATGTTGCAAAACCTGACAAAACCCGGGACAGGGATTTCTGATGGTGATTTCTGGATAGGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299295.7
ENST00000338326.4
ENST00000400127.5
ENST00000400128.5
ENST00000400131.5
ENST00000400135.5
ENST00000543733.5