RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000106069

Ensembl transcript IDs: ENST00000222792.11, ENST00000409041.7, ENST00000409350.5, ENST00000409922.5, ENST00000409964.6, ENST00000410098.1, ENST00000412536.5, ENST00000412711.6, ENST00000421775.6, ENST00000424025.4, ENST00000433720.1, ENST00000439384.5, ENST00000439711.6, ENST00000446446.5, ENST00000461824.1, ENST00000467441.5, ENST00000470261.1, ENST00000474070.5, ENST00000482820.6, ENST00000483081.1, ENST00000491856.1, ENST00000493906.5, ENST00000495789.6

Found 526 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCTCACCTTCACCCTTGTTCTCACGTGGAGGTGGCGCATGTCTATaGGACACAGTACCCCACTCAGCGATCCTCTGCAGTCCAGGAAAT +
Preference number: 1 (lower is better)
Translates to: PSPSPLFSRGGGACL*DTVPHSAILCSPGN
Trigger: ATTTCCTGGACTGCAGAGGATCGCTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTGAGAACAAGGGTGAAGGTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR TCA 90 bp CCAGCAAACCAGACATACATAGGAGGCACAGCAAAAGACCCAAGGTaGGGGGCTTCCCTCACCTTCACCCTTGTTCTCACGTGGAGGTGG +
Preference number: 1 (lower is better)
Translates to: PANQTYIGGTAKDPR*GASLTFTLVLTWRW
Trigger: CCACCTCCACGTGAGAACAAGGGTGAAGGTGAGGGAAGCCCCTCACCTTGGGTCTTTTGCTGTGCCTCCTATGTATGTCTGGTTTGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR GCA 90 bp CTCCAGCAGTTATGGCTGGGGAGGAATGCCGTCCACTTTTCCTCATaGATTAACCGCTCTAGGAGCAGAGCAGGCTTTGTGCACGAGACA +
Preference number: 1 (lower is better)
Translates to: LQQLWLGRNAVHFSS*INRSRSRAGFVHET
Trigger: TGTCTCGTGCACAAAGCCTGCTCTGCTCCTAGAGCGGTTAATGCATGAGGAAAAGTGGACGGCATTCCTCCCCAGCCATAACTGCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433720.1
3UTR CCA 90 bp AAAGTGCCTGGAGTGGTTCCTGGCACAGTGAAACTCCAGCAGTTATaGCTGGGGAGGAATGCCGTCCACTTTTCCTCATGCATTAACCGC +
Preference number: 1 (lower is better)
Translates to: KVPGVVPGTVKLQQL*LGRNAVHFSSCINR
Trigger: GCGGTTAATGCATGAGGAAAAGTGGACGGCATTCCTCCCCAGCCATAACTGCTGGAGTTTCACTGTGCCAGGAACCACTCCAGGCACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433720.1
3UTR GCA 90 bp ATAGCAGGGAAGAGGTCAAACCTCCCTGTGCCAATGGAGTCCATCTaGATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAATGATG +
Preference number: 1 (lower is better)
Translates to: IAGKRSNLPVPMESI*IALGTVQVNSHTMM
Trigger: CATCATTGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCCATTGGCACAGGGAGGTTTGACCTCTTCCCTGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR CCA 90 bp GAGGTCAAACCTCCCTGTGCCAATGGAGTCCATCTGCATAGCCCTTaGGACTGTCCAGGTCAACAGTCACACAATGATGCTCCACGTAAA +
Preference number: 1 (lower is better)
Translates to: EVKPPCANGVHLHSP*DCPGQQSHNDAPRK
Trigger: TTTACGTGGAGCATCATTGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCCATTGGCACAGGGAGGTTTGACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR TCA 90 bp TCAGGTAAAATGACCGCATTCTGTATCTTCTGGGATACACACTCATaGTACGAAAAGACTATGACCAATTCCAAAGCATACTTTGGGAAT +
Preference number: 1 (lower is better)
Translates to: SGKMTAFCIFWDTHS*YEKTMTNSKAYFGN
Trigger: ATTCCCAAAGTATGCTTTGGAATTGGTCATAGTCTTTTCGTATCATGAGTGTGTATCCCAGAAGATACAGAATGCGGTCATTTTACCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR TCA 90 bp CATTCTGTATCTTCTGGGATACACACTCATGATACGAAAAGACTATaGCCAATTCCAAAGCATACTTTGGGAATTCACAAAATTTGTATG +
Preference number: 1 (lower is better)
Translates to: HSVSSGIHTHDTKRL*PIPKHTLGIHKICM
Trigger: CATACAAATTTTGTGAATTCCCAAAGTATGCTTTGGAATTGGTCATAGTCTTTTCGTATCATGAGTGTGTATCCCAGAAGATACAGAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR GCA 90 bp TATGACCAATTCCAAAGCATACTTTGGGAATTCACAAAATTTGTATaGATAGAAAGTGTGTGGACATTTCAGACCATCCTACAATTGCTA +
Preference number: 1 (lower is better)
Translates to: YDQFQSILWEFTKFV*IESVWTFQTILQLL
Trigger: TAGCAATTGTAGGATGGTCTGAAATGTCCACACACTTTCTATGCATACAAATTTTGTGAATTCCCAAAGTATGCTTTGGAATTGGTCATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR TCA 90 bp CCAATGGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAGGTGGCGCATGTCTATaGGACACAGTACCCCACTCA +
Preference number: 2 (lower is better)
Translates to: PMESICIALGTVQVNSHTGGACL*DTVPHS
Trigger: TGAGTGGGGTACTGTGTCTCATAGACATGCGCCACC...TGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCCATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR TCA 90 bp GGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAATGATGCAAAAGACCCAAGGTaGGGGGCTTCCCTCACCTTC +
Preference number: 2 (lower is better)
Translates to: GVHLHSPWDCPGQQSHNDAKDPR*GASLTF
Trigger: GAAGGTGAGGGAAGCCCCTCACCTTGGGTCTTTTGC...ATCATTGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR CCA 90 bp CCAATGGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACACTGTGTCAACTTGGATaGTGCTGGGGCCATTCAGCT +
Preference number: 2 (lower is better)
Translates to: PMESICIALGTVQVNSHTLCQLG*CWGHSA
Trigger: AGCTGAATGGCCCCAGCACCATCCAAGTTGACACAG...TGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCCATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR CCA 90 bp CCTTGTTCTCACGTGGAGGTGGCGCATGTCTATGAGACACAGTACCCCACTCAGTTAGCTGTGTCAACTTaGATGGTGCTGGGGCCATTC +
Preference number: 2 (lower is better)
Translates to: PCSHVEVAHVYETQYPTQLAVST*MVLGPF
Trigger: GAATGGCCCCAGCACCATCCAAGTTGACACAGCTAA...CTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTGAGAACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR CCA 90 bp CCAATGGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAACCCTTGTTCTCACGTaGAGGTGGCGCATGTCTATG +
Preference number: 2 (lower is better)
Translates to: PMESICIALGTVQVNSHTTLVLT*RWRMSM
Trigger: CATAGACATGCGCCACCTCCACGTGAGAACAAGGGT...TGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCCATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR CCA 90 bp CCCTTTCATAGGGATGATACACTGAAAGTGCCTGGAGTGGTTCCTGGCACAGTGTCCAGCAGTTATGGCTaGGGAGGAATGCCGTCCACT +
Preference number: 2 (lower is better)
Translates to: PFHRDDTLKVPGVVPGTVSSSYG*GGMPST
Trigger: AGTGGACGGCATTCCTCCCCAGCCATAACTGCTGGA...CACTGTGCCAGGAACCACTCCAGGCACTTTCAGTGTATCATCCCTATGAAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433720.1
3UTR-3UTR CCA 90 bp CCAATGGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACATTAGCTGTGTCAACTTaGATGGTGCTGGGGCCATTC +
Preference number: 2 (lower is better)
Translates to: PMESICIALGTVQVNSHTLAVST*MVLGPF
Trigger: GAATGGCCCCAGCACCATCCAAGTTGACACAGCTAA...TGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCCATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR CCA 90 bp CAGTACCCCACTCAGCGATCCTCTGCAGTCCAGGAAATTCTAGCACTTGCTTGGTTAGCTGTGTCAACTTaGATGGTGCTGGGGCCATTC +
Preference number: 2 (lower is better)
Translates to: QYPTQRSSAVQEILALAWLAVST*MVLGPF
Trigger: GAATGGCCCCAGCACCATCCAAGTTGACACAGCTAA...CCAAGCAAGTGCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTGGGGTACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR CCA 90 bp GGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAATGATGTTCTCACGTGGAGGTaGCGCATGTCTATGAGACAC +
Preference number: 2 (lower is better)
Translates to: GVHLHSPWDCPGQQSHNDVLTWR*RMSMRH
Trigger: GTGTCTCATAGACATGCGCCACCTCCACGTGAGAAC...ATCATTGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR CCA 90 bp CACTCTTCCAGCAAACCAGACATACATAGGAGGCACAGCAAAAGACCCAAGGTGGTTCTCACGTGGAGGTaGCGCATGTCTATGAGACAC +
Preference number: 2 (lower is better)
Translates to: HSSSKPDIHRRHSKRPKVVLTWR*RMSMRH
Trigger: GTGTCTCATAGACATGCGCCACCTCCACGTGAGAAC...CACCTTGGGTCTTTTGCTGTGCCTCCTATGTATGTCTGGTTTGCTGGAAGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR GCA 90 bp CCCTTTCATAGGGATGATACACTGAAAGTGCCTGGAGTGGTTCCTGGCACAGTGGTCCACTTTTCCTCATaGATTAACCGCTCTAGGAGC +
Preference number: 2 (lower is better)
Translates to: PFHRDDTLKVPGVVPGTVVHFSS*INRSRS
Trigger: GCTCCTAGAGCGGTTAATGCATGAGGAAAAGTGGAC...CACTGTGCCAGGAACCACTCCAGGCACTTTCAGTGTATCATCCCTATGAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433720.1
3UTR-3UTR GCA 90 bp ACCGCATATCATGCAGGGTGGTCAGGGTGCTGTCCTCAGGGGGCCTCATCAGAGGATCCCCAGATTTTCTaGATTCATGAAATTGTCTTT +
Preference number: 2 (lower is better)
Translates to: TAYHAGWSGCCPQGASSEDPQIF*IHEIVF
Trigger: AAAGACAATTTCATGAATGCAGAAAATCTGGGGATC...CTCTGATGAGGCCCCCTGAGGACAGCACCCTGACCACCCTGCATGATATGCGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439711.6
3UTR-3UTR TCA 90 bp CCAATGGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACATTCATTAAAAAGCACTaGGGAGGACAGAGGTATGTC +
Preference number: 2 (lower is better)
Translates to: PMESICIALGTVQVNSHTFIKKH*GGQRYV
Trigger: GACATACCTCTGTCCTCCTCAGTGCTTTTTAATGAA...TGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCCATTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR TCA 90 bp GTTGTGTGTGAGGGCAGCCCTTCGAACCAGGGAGGAGATCTTTTCCACCGCTGTGTTAGTTGTCATTTTTaGAATGTACTCGGCAGCTTT +
Preference number: 2 (lower is better)
Translates to: VVCEGSPSNQGGDLFHRCVSCHF*NVLGSF
Trigger: AAAGCTGCCGAGTACATTTCAAAAATGACAACTAAC...ACAGCGGTGGAAAAGATCTCCTCCCTGGTTCGAAGGGCTGCCCTCACACACAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474070.5
3UTR-3UTR TCA 90 bp CCAATGGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAAACACAAGGGGCAGGTaGAATTTCATTAAAAAGCAC +
Preference number: 2 (lower is better)
Translates to: PMESICIALGTVQVNSHTNTRGR*NFIKKH
Trigger: GTGCTTTTTAATGAAATTTCACCTGCCCCTTGTGTT...TGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCCATTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR TCA 90 bp GGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAATGATCCAAAGCAAGACTGGTaGGTTTACACAAATCATCTC +
Preference number: 2 (lower is better)
Translates to: GVHLHSPWDCPGQQSHNDPKQDW*VYTNHL
Trigger: GAGATGATTTGTGTAAACTCACCAGTCTTGCTTTGG...ATCATTGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR TCA 90 bp GTTGTCGTTGTGTGTGAGGGCAGCCCTTCGAACCAGGGAGGAGATCTTTTCCACTGTGTTCTTCATGTGTaGCGTTTGTTTTTCTTGGTT +
Preference number: 2 (lower is better)
Translates to: VVVVCEGSPSNQGGDLFHCVLHV*RLFFLV
Trigger: AACCAAGAAAAACAAACGTCACACATGAAGAACACA...GTGGAAAAGATCTCCTCCCTGGTTCGAAGGGCTGCCCTCACACACAACGACAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474070.5
3UTR-3UTR GCA 90 bp CCAATGGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAATAGTCATTCTCTTCTaGTCACTCCAAAGCAAGACT +
Preference number: 2 (lower is better)
Translates to: PMESICIALGTVQVNSHTIVILF*SLQSKT
Trigger: AGTCTTGCTTTGGAGTGAGCAGAAGAGAATGACTAT...TGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCCATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR CCA 90 bp CAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGTCACTGTGTCAACTTGGATaGTGCTGGGGCCATTCAGCT +
Preference number: 2 (lower is better)
Translates to: QGAGEISLKSTEEDRGMSLCQLG*CWGHSA
Trigger: AGCTGAATGGCCCCAGCACCATCCAAGTTGACACAG...TGACATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR TCA 90 bp CAAGATAATACTGCATTTGTGGTCAGCTTTTTCAGGGTGTCACAGCAAAATGAGGGTGGCGCATGTCTATaGGACACAGTACCCCACTCA +
Preference number: 2 (lower is better)
Translates to: QDNTAFVVSFFRVSQQNEGGACL*DTVPHS
Trigger: TGAGTGGGGTACTGTGTCTCATAGACATGCGCCACC...CTCATTTTGCTGTGACACCCTGAAAAAGCTGACCACAAATGCAGTATTATCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR TCA 90 bp TACATAAACTACAACAAACAAATCTGTACAGTTGGGAGGAGGGATAATAGCAGGGCAAAAGACCCAAGGTaGGGGGCTTCCCTCACCTTC +
Preference number: 2 (lower is better)
Translates to: YINYNKQICTVGRRDNSRAKDPR*GASLTF
Trigger: GAAGGTGAGGGAAGCCCCTCACCTTGGGTCTTTTGC...CCTGCTATTATCCCTCCTCCCAACTGTACAGATTTGTTTGTTGTAGTTTATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR TCA 90 bp GGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAATGATAACACAAGGGGCAGGTaGAATTTCATTAAAAAGCAC +
Preference number: 2 (lower is better)
Translates to: GVHLHSPWDCPGQQSHNDNTRGR*NFIKKH
Trigger: GTGCTTTTTAATGAAATTTCACCTGCCCCTTGTGTT...ATCATTGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR GCA 90 bp GAGGGACAAGGTACACAGGGTAATAACCAATGCACTGCATTGAGTTCTATTTGCCACTCAGCGATCCTCTaGAGTCCAGGAAATTCTAGC +
Preference number: 2 (lower is better)
Translates to: EGQGTQGNNQCTALSSICHSAIL*SPGNSS
Trigger: GCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTG...GCAAATAGAACTCAATGCAGTGCATTGGTTATTACCCTGTGTACCTTGTCCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR GCA 90 bp ACACAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGCACTCAGCGATCCTCTaGAGTCCAGGAAATTCTAGC +
Preference number: 2 (lower is better)
Translates to: TQGAGEISLKSTEEDRGMHSAIL*SPGNSS
Trigger: GCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTG...CATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR GCA 90 bp GGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAATGATATAGTCATTCTCTTCTaGTCACTCCAAAGCAAGACT +
Preference number: 2 (lower is better)
Translates to: GVHLHSPWDCPGQQSHNDIVILF*SLQSKT
Trigger: AGTCTTGCTTTGGAGTGAGCAGAAGAGAATGACTAT...ATCATTGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR CCA 90 bp ACACAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGCAACTTGGATGGTGCTaGGGCCATTCAGCTCATTTC +
Preference number: 2 (lower is better)
Translates to: TQGAGEISLKSTEEDRGMQLGWC*GHSAHF
Trigger: GAAATGAGCTGAATGGCCCCAGCACCATCCAAGTTG...CATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR CCA 90 bp CAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGTCACAACTTGGATGGTGCTaGGGCCATTCAGCTCATTTC +
Preference number: 2 (lower is better)
Translates to: QGAGEISLKSTEEDRGMSQLGWC*GHSAHF
Trigger: GAAATGAGCTGAATGGCCCCAGCACCATCCAAGTTG...TGACATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR TCA 90 bp TACATAAACTACAACAAACAAATCTGTACAGTTGGGAGGAGGGATAATAGCAGGGGTGGCGCATGTCTATaGGACACAGTACCCCACTCA +
Preference number: 2 (lower is better)
Translates to: YINYNKQICTVGRRDNSRGGACL*DTVPHS
Trigger: TGAGTGGGGTACTGTGTCTCATAGACATGCGCCACC...CCTGCTATTATCCCTCCTCCCAACTGTACAGATTTGTTTGTTGTAGTTTATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR TCA 90 bp GGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAATGATATAGAAATCTTGGTGTaGAAGGCTCATGCTAAGATA +
Preference number: 2 (lower is better)
Translates to: GVHLHSPWDCPGQQSHNDIEILV*KAHAKI
Trigger: TATCTTAGCATGAGCCTTTCACACCAAGATTTCTAT...ATCATTGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR CCA 90 bp CAAGATAATACTGCATTTGTGGTCAGCTTTTTCAGGGTGTCACAGCAAAATGAGACCCTTGTTCTCACGTaGAGGTGGCGCATGTCTATG +
Preference number: 2 (lower is better)
Translates to: QDNTAFVVSFFRVSQQNETLVLT*RWRMSM
Trigger: CATAGACATGCGCCACCTCCACGTGAGAACAAGGGT...CTCATTTTGCTGTGACACCCTGAAAAAGCTGACCACAAATGCAGTATTATCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR CCA 90 bp TACATAAACTACAACAAACAAATCTGTACAGTTGGGAGGAGGGATAATAGCAGGCAACTTGGATGGTGCTaGGGCCATTCAGCTCATTTC +
Preference number: 2 (lower is better)
Translates to: YINYNKQICTVGRRDNSRQLGWC*GHSAHF
Trigger: GAAATGAGCTGAATGGCCCCAGCACCATCCAAGTTG...CCTGCTATTATCCCTCCTCCCAACTGTACAGATTTGTTTGTTGTAGTTTATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR CCA 90 bp AATGACCGCATTCTGTATCTTCTGGGATACACACTCATGATACGAAAAGACTATTTAGCTGTGTCAACTTaGATGGTGCTGGGGCCATTC +
Preference number: 2 (lower is better)
Translates to: NDRILYLLGYTLMIRKDYLAVST*MVLGPF
Trigger: GAATGGCCCCAGCACCATCCAAGTTGACACAGCTAA...ATAGTCTTTTCGTATCATGAGTGTGTATCCCAGAAGATACAGAATGCGGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR TCA 90 bp CCACGTAAAATAGTCATTCTCTTCTGCTCACTCCAAAGCAAGACTGGTGAGTTTTTCATTAAAAAGCACTaGGGAGGACAGAGGTATGTC +
Preference number: 2 (lower is better)
Translates to: PRKIVILFCSLQSKTGEFFIKKH*GGQRYV
Trigger: GACATACCTCTGTCCTCCTCAGTGCTTTTTAATGAA...AAACTCACCAGTCTTGCTTTGGAGTGAGCAGAAGAGAATGACTATTTTACGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR CCA 90 bp CACAAAATTTGTATGCATAGAAAGTGTGTGGACATTTCAGACCATCCTACAATTGTTCTCACGTGGAGGTaGCGCATGTCTATGAGACAC +
Preference number: 2 (lower is better)
Translates to: HKICMHRKCVDISDHPTIVLTWR*RMSMRH
Trigger: GTGTCTCATAGACATGCGCCACCTCCACGTGAGAAC...AATTGTAGGATGGTCTGAAATGTCCACACACTTTCTATGCATACAAATTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR GCA 90 bp CACAAAATTTGTATGCATAGAAAGTGTGTGGACATTTCAGACCATCCTACAATTCACTCAGCGATCCTCTaGAGTCCAGGAAATTCTAGC +
Preference number: 2 (lower is better)
Translates to: HKICMHRKCVDISDHPTIHSAIL*SPGNSS
Trigger: GCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTG...AATTGTAGGATGGTCTGAAATGTCCACACACTTTCTATGCATACAAATTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR GCA 90 bp ACACAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGCAGGGTAATAACCAATaGACTGCATTGAGTTCTATT +
Preference number: 2 (lower is better)
Translates to: TQGAGEISLKSTEEDRGMQGNNQ*TALSSI
Trigger: AATAGAACTCAATGCAGTGCATTGGTTATTACCCTG...CATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR TCA 90 bp TACATAAACTACAACAAACAAATCTGTACAGTTGGGAGGAGGGATAATAGCAGGTTCATTAAAAAGCACTaGGGAGGACAGAGGTATGTC +
Preference number: 2 (lower is better)
Translates to: YINYNKQICTVGRRDNSRFIKKH*GGQRYV
Trigger: GACATACCTCTGTCCTCCTCAGTGCTTTTTAATGAA...CCTGCTATTATCCCTCCTCCCAACTGTACAGATTTGTTTGTTGTAGTTTATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR TCA 90 bp TACATAAACTACAACAAACAAATCTGTACAGTTGGGAGGAGGGATAATAGCAGGTGGGATACACACTCATaGTACGAAAAGACTATGACC +
Preference number: 2 (lower is better)
Translates to: YINYNKQICTVGRRDNSRWDTHS*YEKTMT
Trigger: GGTCATAGTCTTTTCGTATCATGAGTGTGTATCCCA...CCTGCTATTATCCCTCCTCCCAACTGTACAGATTTGTTTGTTGTAGTTTATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR CCA 90 bp TACATAAACTACAACAAACAAATCTGTACAGTTGGGAGGAGGGATAATAGCAGGTGCATAGAAAGTGTGTaGACATTTCAGACCATCCTA +
Preference number: 2 (lower is better)
Translates to: YINYNKQICTVGRRDNSRCIESV*TFQTIL
Trigger: TAGGATGGTCTGAAATGTCCACACACTTTCTATGCA...CCTGCTATTATCCCTCCTCCCAACTGTACAGATTTGTTTGTTGTAGTTTATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR GCA 90 bp CACAAAATTTGTATGCATAGAAAGTGTGTGGACATTTCAGACCATCCTACAATTCAGGGTAATAACCAATaGACTGCATTGAGTTCTATT +
Preference number: 2 (lower is better)
Translates to: HKICMHRKCVDISDHPTIQGNNQ*TALSSI
Trigger: AATAGAACTCAATGCAGTGCATTGGTTATTACCCTG...AATTGTAGGATGGTCTGAAATGTCCACACACTTTCTATGCATACAAATTTTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR GCA 72 bp GCTTTTGGTACCGCATATCATGCAGGGTGGTCAGGGTaGTGTCCTCAGGGGGCCTCATCAGAGTGGGCCCAA +
Preference number: 3 (lower is better)
Translates to: AFGTAYHAGWSG*CPQGASSEWAQ
Trigger: TTGGGCCCACTCTGATGAGGCCCCCTGAGGACAGCACCCTGACCACCCTGCATGATATGCGGTACCAAAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439711.6
3UTR CCA 72 bp GCTTCCCTCACCTTCACCCTTGTTCTCACGTGGAGGTaGCGCATGTCTATGAGACACAGTACCCCACTCAGC +
Preference number: 3 (lower is better)
Translates to: ASLTFTLVLTWR*RMSMRHSTPLS
Trigger: GCTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTGAGAACAAGGGTGAAGGTGAGGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR CCA 72 bp GCACAATCAGCTTTTGGTACCGCATATCATGCAGGGTaGTCAGGGTGCTGTCCTCAGGGGGCCTCATCAGAG +
Preference number: 3 (lower is better)
Translates to: AQSAFGTAYHAG*SGCCPQGASSE
Trigger: CTCTGATGAGGCCCCCTGAGGACAGCACCCTGACCACCCTGCATGATATGCGGTACCAAAAGCTGATTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439711.6
3UTR TCA 72 bp TCACCCTTGTTCTCACGTGGAGGTGGCGCATGTCTATaGGACACAGTACCCCACTCAGCGATCCTCTGCAGT +
Preference number: 3 (lower is better)
Translates to: SPLFSRGGGACL*DTVPHSAILCS
Trigger: ACTGCAGAGGATCGCTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTGAGAACAAGGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR TCA 72 bp CAGACATACATAGGAGGCACAGCAAAAGACCCAAGGTaGGGGGCTTCCCTCACCTTCACCCTTGTTCTCACG +
Preference number: 3 (lower is better)
Translates to: QTYIGGTAKDPR*GASLTFTLVLT
Trigger: CGTGAGAACAAGGGTGAAGGTGAGGGAAGCCCCTCACCTTGGGTCTTTTGCTGTGCCTCCTATGTATGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR GCA 72 bp AAGAGGTCAAACCTCCCTGTGCCAATGGAGTCCATCTaGATAGCCCTTGGGACTGTCCAGGTCAACAGTCAC +
Preference number: 3 (lower is better)
Translates to: KRSNLPVPMESI*IALGTVQVNSH
Trigger: GTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCCATTGGCACAGGGAGGTTTGACCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR CCA 72 bp CCTCCCTGTGCCAATGGAGTCCATCTGCATAGCCCTTaGGACTGTCCAGGTCAACAGTCACACAATGATGCT +
Preference number: 3 (lower is better)
Translates to: PPCANGVHLHSP*DCPGQQSHNDA
Trigger: AGCATCATTGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCCATTGGCACAGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR GCA 72 bp TTATGGCTGGGGAGGAATGCCGTCCACTTTTCCTCATaGATTAACCGCTCTAGGAGCAGAGCAGGCTTTGTG +
Preference number: 3 (lower is better)
Translates to: LWLGRNAVHFSS*INRSRSRAGFV
Trigger: CACAAAGCCTGCTCTGCTCCTAGAGCGGTTAATGCATGAGGAAAAGTGGACGGCATTCCTCCCCAGCCATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433720.1
3UTR-3UTR CAA 90 bp CCAATGGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACATTTAGCTGTGTCAACTaGGATGGTGCTGGGGCCATT +
Preference number: 3 (lower is better)
Translates to: PMESICIALGTVQVNSHTFSCVN*DGAGAI
Trigger: AATGGCCCCAGCACCATCCAAGTTGACACAGCTAAA...TGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCCATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR CAA 90 bp CAAGATAATACTGCATTTGTGGTCAGCTTTTTCAGGGTGTCACAGCAAAATGAGCCCTCACCTTCACCCTaGTTCTCACGTGGAGGTGGC +
Preference number: 3 (lower is better)
Translates to: QDNTAFVVSFFRVSQQNEPSPSP*FSRGGG
Trigger: GCCACCTCCACGTGAGAACAAGGGTGAAGGTGAGGG...CTCATTTTGCTGTGACACCCTGAAAAAGCTGACCACAAATGCAGTATTATCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR CAA 90 bp AATGACCGCATTCTGTATCTTCTGGGATACACACTCATGATACGAAAAGACTATCCCTCACCTTCACCCTaGTTCTCACGTGGAGGTGGC +
Preference number: 3 (lower is better)
Translates to: NDRILYLLGYTLMIRKDYPSPSP*FSRGGG
Trigger: GCCACCTCCACGTGAGAACAAGGGTGAAGGTGAGGG...ATAGTCTTTTCGTATCATGAGTGTGTATCCCAGAAGATACAGAATGCGGTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR CAA 90 bp CAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGTCATTTAGCTGTGTCAACTaGGATGGTGCTGGGGCCATT +
Preference number: 3 (lower is better)
Translates to: QGAGEISLKSTEEDRGMSFSCVN*DGAGAI
Trigger: AATGGCCCCAGCACCATCCAAGTTGACACAGCTAAA...TGACATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR CAA 90 bp ATAATTGAAGTGGTTGTCGTTGTGTGTGAGGGCAGCCCTTCGAACCAGGGAGGATGTACTCGGCAGCTTTaGTTTCTATGTACAGTGTTA +
Preference number: 3 (lower is better)
Translates to: IIEVVVVVCEGSPSNQGGCTRQL*FLCTVL
Trigger: TAACACTGTACATAGAAACAAAAGCTGCCGAGTACA...TCCTCCCTGGTTCGAAGGGCTGCCCTCACACACAACGACAACCACTTCAATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474070.5
3UTR-3UTR CAA 90 bp CACAAAATTTGTATGCATAGAAAGTGTGTGGACATTTCAGACCATCCTACAATTCCCTCACCTTCACCCTaGTTCTCACGTGGAGGTGGC +
Preference number: 3 (lower is better)
Translates to: HKICMHRKCVDISDHPTIPSPSP*FSRGGG
Trigger: GCCACCTCCACGTGAGAACAAGGGTGAAGGTGAGGG...AATTGTAGGATGGTCTGAAATGTCCACACACTTTCTATGCATACAAATTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR CAA 90 bp CAAGATAATACTGCATTTGTGGTCAGCTTTTTCAGGGTGTCACAGCAAAATGAGTTTAGCTGTGTCAACTaGGATGGTGCTGGGGCCATT +
Preference number: 3 (lower is better)
Translates to: QDNTAFVVSFFRVSQQNEFSCVN*DGAGAI
Trigger: AATGGCCCCAGCACCATCCAAGTTGACACAGCTAAA...CTCATTTTGCTGTGACACCCTGAAAAAGCTGACCACAAATGCAGTATTATCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR CCA 72 bp GGAGGACAGAGGTATGTCAAGATAATACTGCATTTGTaGTCAGCTTTTTCAGGGTGTCACAGCAAAATGAGG +
Preference number: 3 (lower is better)
Translates to: GGQRYVKIILHL*SAFSGCHSKMR
Trigger: CCTCATTTTGCTGTGACACCCTGAAAAAGCTGACCACAAATGCAGTATTATCTTGACATACCTCTGTCCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR CAA 90 bp TACATAAACTACAACAAACAAATCTGTACAGTTGGGAGGAGGGATAATAGCAGGATGAATTCAGAGGGCTaGGCCAGGAAGAAAAGAGGG +
Preference number: 3 (lower is better)
Translates to: YINYNKQICTVGRRDNSRMNSEG*ARKKRG
Trigger: CCCTCTTTTCTTCCTGGCCAAGCCCTCTGAATTCAT...CCTGCTATTATCCCTCCTCCCAACTGTACAGATTTGTTTGTTGTAGTTTATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR GCA 72 bp CACAATGATGCTCCACGTAAAATAGTCATTCTCTTCTaGTCACTCCAAAGCAAGACTGGTGAGTTTACACAA +
Preference number: 3 (lower is better)
Translates to: HNDAPRKIVILF*SLQSKTGEFTQ
Trigger: TTGTGTAAACTCACCAGTCTTGCTTTGGAGTGAGCAGAAGAGAATGACTATTTTACGTGGAGCATCATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR CAA 90 bp CACAAAATTTGTATGCATAGAAAGTGTGTGGACATTTCAGACCATCCTACAATTTTTAGCTGTGTCAACTaGGATGGTGCTGGGGCCATT +
Preference number: 3 (lower is better)
Translates to: HKICMHRKCVDISDHPTIFSCVN*DGAGAI
Trigger: AATGGCCCCAGCACCATCCAAGTTGACACAGCTAAA...AATTGTAGGATGGTCTGAAATGTCCACACACTTTCTATGCATACAAATTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR TCA 72 bp ATGACCGCATTCTGTATCTTCTGGGATACACACTCATaGTACGAAAAGACTATGACCAATTCCAAAGCATAC +
Preference number: 3 (lower is better)
Translates to: MTAFCIFWDTHS*YEKTMTNSKAY
Trigger: GTATGCTTTGGAATTGGTCATAGTCTTTTCGTATCATGAGTGTGTATCCCAGAAGATACAGAATGCGGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR GCA 72 bp TCAGCGATCCTCTGCAGTCCAGGAAATTCTAGCACTTaGTTGGAAAACAAATCAAGTGGTAAGAAATGTTTT +
Preference number: 3 (lower is better)
Translates to: SAILCSPGNSST*LENKSSGKKCF
Trigger: AAAACATTTCTTACCACTTGATTTGTTTTCCAAGCAAGTGCTAGAATTTCCTGGACTGCAGAGGATCGCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR TCA 72 bp TCTTCTGGGATACACACTCATGATACGAAAAGACTATaGCCAATTCCAAAGCATACTTTGGGAATTCACAAA +
Preference number: 3 (lower is better)
Translates to: SSGIHTHDTKRL*PIPKHTLGIHK
Trigger: TTTGTGAATTCCCAAAGTATGCTTTGGAATTGGTCATAGTCTTTTCGTATCATGAGTGTGTATCCCAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR CAA 90 bp CACAAAATTTGTATGCATAGAAAGTGTGTGGACATTTCAGACCATCCTACAATTAAGATAATACTGCATTaGTGGTCAGCTTTTTCAGGG +
Preference number: 3 (lower is better)
Translates to: HKICMHRKCVDISDHPTIKIILH*WSAFSG
Trigger: CCCTGAAAAAGCTGACCACAAATGCAGTATTATCTT...AATTGTAGGATGGTCTGAAATGTCCACACACTTTCTATGCATACAAATTTTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR-3UTR CAA 90 bp CACAAAATTTGTATGCATAGAAAGTGTGTGGACATTTCAGACCATCCTACAATTAATTCTAGCACTTGCTaGGAAAACAAATCAAGTGGT +
Preference number: 3 (lower is better)
Translates to: HKICMHRKCVDISDHPTINSSTC*ENKSSG
Trigger: ACCACTTGATTTGTTTTCCAAGCAAGTGCTAGAATT...AATTGTAGGATGGTCTGAAATGTCCACACACTTTCTATGCATACAAATTTTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
3UTR GCA 72 bp TTCCAAAGCATACTTTGGGAATTCACAAAATTTGTATaGATAGAAAGTGTGTGGACATTTCAGACCATCCTA +
Preference number: 3 (lower is better)
Translates to: FQSILWEFTKFV*IESVWTFQTIL
Trigger: TAGGATGGTCTGAAATGTCCACACACTTTCTATGCATACAAATTTTGTGAATTCCCAAAGTATGCTTTGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp AGGGTGGTCAGGGTGCTGTCCTCAGGGGGCCTCATCAGAGTGGGCCCAAACACGGCAGGGTGGTCAGGGTaGTGTCCTCAGGGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: RVVRVLSSGGLIRVGPNTAGWSG*CPQGAS
Trigger: TGAGGCCCCCTGAGGACAGCACCCTGACCACCCTGC...CGTGTTTGGGCCCACTCTGATGAGGCCCCCTGAGGACAGCACCCTGACCACCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000439711.6
CDS-3UTR CCA 90 bp ACCGCATATCATGCAGGGTGGTCAGGGTGCTGTCCTCAGGGGGCCTCATCAGAGGAGCACCGGACCCCTTaGGCGATGAGCCCCCACATG +
Preference number: 4 (lower is better)
Translates to: TAYHAGWSGCCPQGASSEEHRTP*AMSPHM
Trigger: CATGTGGGGGCTCATCGCCCAAGGGGTCCGGTGCTC...CTCTGATGAGGCCCCCTGAGGACAGCACCCTGACCACCCTGCATGATATGCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000439711.6
CDS-3UTR TCA 90 bp GTGGTCAGGGTGCTGTCCTCAGGGGGCCTCATCAGAGTGGGCCCAAACACGATCGTTCAATCCACAGTCTaGGCACCGGACCCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: VVRVLSSGGLIRVGPNTIVQSTV*APDPLG
Trigger: GCCCAAGGGGTCCGGTGCTCAGACTGTGGATTGAAC...GATCGTGTTTGGGCCCACTCTGATGAGGCCCCCTGAGGACAGCACCCTGACCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439711.6
CDS-3UTR CCA 90 bp GGGTGGTCAGGGTGCTGTCCTCAGGGGGCCTCATCAGAGTGGGCCCAAACACGAACGGCCAGCAGTTCTTaGCGTTTCCTGCCCTGCTTA +
Preference number: 4 (lower is better)
Translates to: GWSGCCPQGASSEWAQTRTASSS*RFLPCL
Trigger: TAAGCAGGGCAGGAAACGCCAAGAACTGCTGGCCGT...TCGTGTTTGGGCCCACTCTGATGAGGCCCCCTGAGGACAGCACCCTGACCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439711.6
CDS-3UTR TCA 90 bp GTGGTCAGGGTGCTGTCCTCAGGGGGCCTCATCAGAGTGGGCCCAAACACGATCAAAGAAAGCCGCCTTTaGCACCCACCTTCACCCCGA +
Preference number: 4 (lower is better)
Translates to: VVRVLSSGGLIRVGPNTIKESRL*HPPSPR
Trigger: TCGGGGTGAAGGTGGGTGTCAAAGGCGGCTTTCTTT...GATCGTGTTTGGGCCCACTCTGATGAGGCCCCCTGAGGACAGCACCCTGACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439711.6
CDS-3UTR GCA 90 bp CCAATGGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAGGAGTTGCTGGACGCTaGCATCTCCGCGCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: PMESICIALGTVQVNSHTGVAGR*HLRAPL
Trigger: GAGGGGCGCGCGGAGATGGCAGCGTCCAGCAACTCC...TGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCCATTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222792.11
CDS-3UTR GCA 90 bp GGGTGGTCAGGGTGCTGTCCTCAGGGGGCCTCATCAGAGTGGGCCCAAACACGATGGCGTTTCCTGCCCTaGTTAGACTTCCGAACCACA +
Preference number: 4 (lower is better)
Translates to: GWSGCCPQGASSEWAQTRWRFLP*LDFRTT
Trigger: TGTGGTTCGGAAGTCTAAGCAGGGCAGGAAACGCCA...TCGTGTTTGGGCCCACTCTGATGAGGCCCCCTGAGGACAGCACCCTGACCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439711.6
CDS-3UTR TCA 90 bp AGCTTTTGGTACCGCATATCATGCAGGGTGGTCAGGGTGCTGTCCTCAGGGGGCGGTTGTCGTTGTGTGTaGGGGCAGCCCTTCGAACCA +
Preference number: 4 (lower is better)
Translates to: SFWYRISCRVVRVLSSGGGCRCV*GQPFEP
Trigger: TGGTTCGAAGGGCTGCCCTCACACACAACGACAACC...GCCCCCTGAGGACAGCACCCTGACCACCCTGCATGATATGCGGTACCAAAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439711.6
CDS-3UTR GCA 90 bp CAGTACCCCACTCAGCGATCCTCTGCAGTCCAGGAAATTCTAGCACTTGCTTGGGCAGGGTGGTCAGGGTaGTGTCCTCAGGGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: QYPTQRSSAVQEILALAWAGWSG*CPQGAS
Trigger: TGAGGCCCCCTGAGGACAGCACCCTGACCACCCTGC...CCAAGCAAGTGCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTGGGGTACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp CGCATATCATGCAGGGTGGTCAGGGTGCTGTCCTCAGGGGGCCTCATCAGAGTGTGGTACCGCATATCATaGAGGGTGGTCAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RISCRVVRVLSSGGLIRVWYRIS*RVVRVL
Trigger: CAGCACCCTGACCACCCTGCATGATATGCGGTACCA...CACTCTGATGAGGCCCCCTGAGGACAGCACCCTGACCACCCTGCATGATATGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439711.6
CDS-3UTR CCA 90 bp CCTTGTTCTCACGTGGAGGTGGCGCATGTCTATGAGACACAGTACCCCACTCAGACGAGCCGGACAGGCTaGAGTTGCTGGACGCTGCCA +
Preference number: 4 (lower is better)
Translates to: PCSHVEVAHVYETQYPTQTSRTG*SCWTLP
Trigger: TGGCAGCGTCCAGCAACTCCAGCCTGTCCGGCTCGT...CTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTGAGAACAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222792.11
CDS-3UTR CCA 90 bp GTGGTCAGGGTGCTGTCCTCAGGGGGCCTCATCAGAGTGGGCCCAAACACGATCGGGCCTCGGAACGTGTaGACCTTAAAGTTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: VVRVLSSGGLIRVGPNTIGPRNV*TLKLCV
Trigger: GACACACAACTTTAAGGTCCACACGTTCCGAGGCCC...GATCGTGTTTGGGCCCACTCTGATGAGGCCCCCTGAGGACAGCACCCTGACCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439711.6
CDS-3UTR TCA 90 bp GTTGTGTGTGAGGGCAGCCCTTCGAACCAGGGAGGAGATCTTTTCCACCGCTGTGGTTGTCGTTGTGTGTaGGGGCAGCCCTTCGAACCA +
Preference number: 4 (lower is better)
Translates to: VVCEGSPSNQGGDLFHRCGCRCV*GQPFEP
Trigger: TGGTTCGAAGGGCTGCCCTCACACACAACGACAACC...ACAGCGGTGGAAAAGATCTCCTCCCTGGTTCGAAGGGCTGCCCTCACACACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474070.5
CDS-3UTR TCA 90 bp CAGTACCCCACTCAGCGATCCTCTGCAGTCCAGGAAATTCTAGCACTTGCTTGGAAGGCCCAGTTTGAGTaGTGGAGGGGGCCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: QYPTQRSSAVQEILALAWKAQFE*WRGPGF
Trigger: GAAGCCGGGCCCCCTCCATCACTCAAACTGGGCCTT...CCAAGCAAGTGCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTGGGGTACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412711.6
CDS-3UTR GCA 90 bp CAGTACCCCACTCAGCGATCCTCTGCAGTCCAGGAAATTCTAGCACTTGCTTGGCCAGCCTCCGGACTCTaGCTGCACTTCCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: QYPTQRSSAVQEILALAWPASGL*LHFLLH
Trigger: GTGGAGCAGGAAGTGCAGGCAGAGTCCGGAGGCTGG...CCAAGCAAGTGCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTGGGGTACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222792.11
CDS-3UTR CCA 90 bp GGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAATGATGAGCACCGGACCCCTTaGGCGATGAGCCCCCACATG +
Preference number: 4 (lower is better)
Translates to: GVHLHSPWDCPGQQSHNDEHRTP*AMSPHM
Trigger: CATGTGGGGGCTCATCGCCCAAGGGGTCCGGTGCTC...ATCATTGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp GTGGTCAGGGTGCTGTCCTCAGGGGGCCTCATCAGAGTGGGCCCAAACACGATCCTCTTGAGATCAGGTTaGCAGTCATTGGGAACGTGC +
Preference number: 4 (lower is better)
Translates to: VVRVLSSGGLIRVGPNTILLRSG*QSLGTC
Trigger: GCACGTTCCCAATGACTGCCAACCTGATCTCAAGAG...GATCGTGTTTGGGCCCACTCTGATGAGGCCCCCTGAGGACAGCACCCTGACCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439711.6
CDS-3UTR TCA 90 bp GTTGTGTGTGAGGGCAGCCCTTCGAACCAGGGAGGAGATCTTTTCCACCGCTGTCCTCCCGAGGACAAATaGTTCTCTTGGGACGAGGTG +
Preference number: 4 (lower is better)
Translates to: VVCEGSPSNQGGDLFHRCPPEDK*FSWDEV
Trigger: CACCTCGTCCCAAGAGAATCATTTGTCCTCGGGAGG...ACAGCGGTGGAAAAGATCTCCTCCCTGGTTCGAAGGGCTGCCCTCACACACAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474070.5
CDS-3UTR TCA 90 bp CCTTGTTCTCACGTGGAGGTGGCGCATGTCTATGAGACACAGTACCCCACTCAGGGTTGTCGTTGTGTGTaGGGGCAGCCCTTCGAACCA +
Preference number: 4 (lower is better)
Translates to: PCSHVEVAHVYETQYPTQGCRCV*GQPFEP
Trigger: TGGTTCGAAGGGCTGCCCTCACACACAACGACAACC...CTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTGAGAACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp CACGTGGAGGTGGCGCATGTCTATGAGACACAGTACCCCACTCAGCGATCCTCTGGTGGCGCATGTCTATaGGACACAGTACCCCACTCA +
Preference number: 4 (lower is better)
Translates to: HVEVAHVYETQYPTQRSSGGACL*DTVPHS
Trigger: TGAGTGGGGTACTGTGTCTCATAGACATGCGCCACC...AGAGGATCGCTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp ACACTGAAAGTGCCTGGAGTGGTTCCTGGCACAGTGAAACTCCAGCAGTTATGGCTGGGATTACAGGCGTaGGCCATCACAGTGGCGCCC +
Preference number: 4 (lower is better)
Translates to: TLKVPGVVPGTVKLQQLWLGLQA*AITVAP
Trigger: GGGCGCCACTGTGATGGCTCACGCCTGTAATCCCAG...CCATAACTGCTGGAGTTTCACTGTGCCAGGAACCACTCCAGGCACTTTCAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433720.1
CDS-3UTR TCA 90 bp TGGTTGTCGTTGTGTGTGAGGGCAGCCCTTCGAACCAGGGAGGAGATCTTTTCCCAGCATGGGAAGCGCTaGCTTGATGCGGCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: WLSLCVRAALRTREEIFSQHGKR*LDAARF
Trigger: AAACCTGGCCGCATCAAGTCAGCGCTTCCCATGCTG...GGAAAAGATCTCCTCCCTGGTTCGAAGGGCTGCCCTCACACACAACGACAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474070.5
CDS-3UTR GCA 90 bp GGGTGGTCAGGGTGCTGTCCTCAGGGGGCCTCATCAGAGTGGGCCCAAACACGACAGTCATTGGGAACGTaGTTGGAACACTGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: GWSGCCPQGASSEWAQTRQSLGT*LEHCLC
Trigger: ACACAAACAGTGTTCCAAGCACGTTCCCAATGACTG...TCGTGTTTGGGCCCACTCTGATGAGGCCCCCTGAGGACAGCACCCTGACCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439711.6
CDS-3UTR GCA 90 bp CACTCTTCCAGCAAACCAGACATACATAGGAGGCACAGCAAAAGACCCAAGGTGGCAGGGTGGTCAGGGTaGTGTCCTCAGGGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: HSSSKPDIHRRHSKRPKVAGWSG*CPQGAS
Trigger: TGAGGCCCCCTGAGGACAGCACCCTGACCACCCTGC...CACCTTGGGTCTTTTGCTGTGCCTCCTATGTATGTCTGGTTTGCTGGAAGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp CACGTGGAGGTGGCGCATGTCTATGAGACACAGTACCCCACTCAGCGATCCTCTCTTTCCAGTTTGCTCTaGAGAGCCCAGGAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: HVEVAHVYETQYPTQRSSLSSLL*RAQEAL
Trigger: CAGGGCTTCCTGGGCTCTGCAGAGCAAACTGGAAAG...AGAGGATCGCTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412711.6
CDS-3UTR CCA 90 bp CACGTGGAGGTGGCGCATGTCTATGAGACACAGTACCCCACTCAGCGATCCTCTCAGCGTGTAGCATCCTaGTTGCCGCTGGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: HVEVAHVYETQYPTQRSSQRVAS*LPLAFS
Trigger: AGAGAAAGCCAGCGGCAACCAGGATGCTACACGCTG...AGAGGATCGCTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222792.11
CDS-3UTR CCA 90 bp GTTGTCGTTGTGTGTGAGGGCAGCCCTTCGAACCAGGGAGGAGATCTTTTCCACCTGGGACCAGGAGGTTaGGACACGACGACGCACTTT +
Preference number: 4 (lower is better)
Translates to: VVVVCEGSPSNQGGDLFHLGPGG*DTTTHF
Trigger: AAAGTGCGTCGTCGTGTCCCAACCTCCTGGTCCCAG...GTGGAAAAGATCTCCTCCCTGGTTCGAAGGGCTGCCCTCACACACAACGACAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474070.5
CDS-3UTR CCA 90 bp TGGTTGTCGTTGTGTGTGAGGGCAGCCCTTCGAACCAGGGAGGAGATCTTTTCCATGCGGCCAGGTTTCTaGGACCAGGAGGTTGGGACA +
Preference number: 4 (lower is better)
Translates to: WLSLCVRAALRTREEIFSMRPGF*DQEVGT
Trigger: TGTCCCAACCTCCTGGTCCCAGAAACCTGGCCGCAT...GGAAAAGATCTCCTCCCTGGTTCGAAGGGCTGCCCTCACACACAACGACAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474070.5
CDS-3UTR TCA 90 bp TGCAGGGTGGTCAGGGTGCTGTCCTCAGGGGGCCTCATCAGAGTGGGCCCAAACCTTCAATGTGTTCAGTaGACCCAGAGACTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: CRVVRVLSSGGLIRVGPNLQCVQ*TQRLCK
Trigger: TTTACAGAGTCTCTGGGTTCACTGAACACATTGAAG...GTTTGGGCCCACTCTGATGAGGCCCCCTGAGGACAGCACCCTGACCACCCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439711.6
CDS-3UTR TCA 90 bp CACGTGGAGGTGGCGCATGTCTATGAGACACAGTACCCCACTCAGCGATCCTCTGGTGTCACAGCAAAATaGGGGACAAGGTACACAGGG +
Preference number: 4 (lower is better)
Translates to: HVEVAHVYETQYPTQRSSGVTAK*GTRYTG
Trigger: CCCTGTGTACCTTGTCCCTCATTTTGCTGTGACACC...AGAGGATCGCTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp CCTTGTTCTCACGTGGAGGTGGCGCATGTCTATGAGACACAGTACCCCACTCAGAAAGAAAGCCGCCTTTaGCACCCACCTTCACCCCGA +
Preference number: 4 (lower is better)
Translates to: PCSHVEVAHVYETQYPTQKESRL*HPPSPR
Trigger: TCGGGGTGAAGGTGGGTGTCAAAGGCGGCTTTCTTT...CTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTGAGAACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp TTATGGCTGGGGAGGAATGCCGTCCACTTTTCCTCATGCATTAACCGCTCTAGGAATCTCCTGACCTCATaGTCCGCCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: LWLGRNAVHFSSCINRSRNLLTS*SAHLGL
Trigger: GAGGCCGAGGTGGGCGGATCATGAGGTCAGGAGATT...CCTAGAGCGGTTAATGCATGAGGAAAAGTGGACGGCATTCCTCCCCAGCCATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433720.1
CDS-3UTR GCA 90 bp GGGTGGTCAGGGTGCTGTCCTCAGGGGGCCTCATCAGAGTGGGCCCAAACACGACTTCAATTTCCCGAATaGATATGTCTACCACCATGG +
Preference number: 4 (lower is better)
Translates to: GWSGCCPQGASSEWAQTRLQFPE*ICLPPW
Trigger: CCATGGTGGTAGACATATGCATTCGGGAAATTGAAG...TCGTGTTTGGGCCCACTCTGATGAGGCCCCCTGAGGACAGCACCCTGACCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439711.6
CDS-3UTR CCA 90 bp GGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAATGATCCCATGGCAAAGTCCTaGGGACGCGCAGAAAGCACC +
Preference number: 4 (lower is better)
Translates to: GVHLHSPWDCPGQQSHNDPMAKS*GRAEST
Trigger: GGTGCTTTCTGCGCGTCCCCAGGACTTTGCCATGGG...ATCATTGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222792.11
CDS-3UTR CCA 90 bp ATGCAGGGTGGTCAGGGTGCTGTCCTCAGGGGGCCTCATCAGAGTGGGCCCAAAATATGTCTACCACCATaGGTCTCTGAGTGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: MQGGQGAVLRGPHQSGPKICLPP*VSECCE
Trigger: CTCACAACACTCAGAGACCCATGGTGGTAGACATAT...TTTGGGCCCACTCTGATGAGGCCCCCTGAGGACAGCACCCTGACCACCCTGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439711.6
CDS-3UTR CCA 90 bp GTTGTGTGTGAGGGCAGCCCTTCGAACCAGGGAGGAGATCTTTTCCACCGCTGTTCTTCAGCATCTGAATaGCACCCCGCCGATGCTCTT +
Preference number: 4 (lower is better)
Translates to: VVCEGSPSNQGGDLFHRCSSASE*HPADAL
Trigger: AAGAGCATCGGCGGGGTGCCATTCAGATGCTGAAGA...ACAGCGGTGGAAAAGATCTCCTCCCTGGTTCGAAGGGCTGCCCTCACACACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474070.5
CDS-3UTR TCA 90 bp GAAGTGGTTGTCGTTGTGTGTGAGGGCAGCCCTTCGAACCAGGGAGGAGATCTTTCTGGTTTCCAAACCTaGGAGCCAGCGTGTAGCATC +
Preference number: 4 (lower is better)
Translates to: EVVVVVCEGSPSNQGGDLSGFQT*EPACSI
Trigger: GATGCTACACGCTGGCTCTCAGGTTTGGAAACCAGA...AAGATCTCCTCCCTGGTTCGAAGGGCTGCCCTCACACACAACGACAACCACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474070.5
CDS-3UTR TCA 90 bp CACTCTTCCAGCAAACCAGACATACATAGGAGGCACAGCAAAAGACCCAAGGTGGTTCAATCCACAGTCTaGGCACCGGACCCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: HSSSKPDIHRRHSKRPKVVQSTV*APDPLG
Trigger: GCCCAAGGGGTCCGGTGCTCAGACTGTGGATTGAAC...CACCTTGGGTCTTTTGCTGTGCCTCCTATGTATGTCTGGTTTGCTGGAAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR TCA 90 bp CATATCATGCAGGGTGGTCAGGGTGCTGTCCTCAGGGGGCCTCATCAGAGTGGGCCTTCACAAGTGTTGTaGGGTCACAACAGTACACTT +
Preference number: 4 (lower is better)
Translates to: HIMQGGQGAVLRGPHQSGPSQVL*GHNSTL
Trigger: AAGTGTACTGTTGTGACCTCACAACACTTGTGAAGG...CCCACTCTGATGAGGCCCCCTGAGGACAGCACCCTGACCACCCTGCATGATATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439711.6
CDS-3UTR GCA 90 bp CCTTGTTCTCACGTGGAGGTGGCGCATGTCTATGAGACACAGTACCCCACTCAGTGGCGTTTCCTGCCCTaGTTAGACTTCCGAACCACA +
Preference number: 4 (lower is better)
Translates to: PCSHVEVAHVYETQYPTQWRFLP*LDFRTT
Trigger: TGTGGTTCGGAAGTCTAAGCAGGGCAGGAAACGCCA...CTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTGAGAACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp GAGGGACAAGGTACACAGGGTAATAACCAATGCACTGCATTGAGTTCTATTTGCCAGGGGCCGGCAGCCTaGTTTCTCCTGCCGCAGCAC +
Preference number: 4 (lower is better)
Translates to: EGQGTQGNNQCTALSSICQGPAA*FLLPQH
Trigger: GTGCTGCGGCAGGAGAAAGCAGGCTGCCGGCCCCTG...GCAAATAGAACTCAATGCAGTGCATTGGTTATTACCCTGTGTACCTTGTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412711.6
CDS-3UTR CCA 90 bp ACCGCATATCATGCAGGGTGGTCAGGGTGCTGTCCTCAGGGGGCCTCATCAGAGCATTGGGAACGTGCTTaGAACACTGTTTGTGTACGT +
Preference number: 4 (lower is better)
Translates to: TAYHAGWSGCCPQGASSEHWERA*NTVCVR
Trigger: ACGTACACAAACAGTGTTCCAAGCACGTTCCCAATG...CTCTGATGAGGCCCCCTGAGGACAGCACCCTGACCACCCTGCATGATATGCGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439711.6
CDS-3UTR CCA 90 bp CATATCATGCAGGGTGGTCAGGGTGCTGTCCTCAGGGGGCCTCATCAGAGTGGGTGCACAATCAGCTTTTaGTACCGCATATCATGCAGG +
Preference number: 4 (lower is better)
Translates to: HIMQGGQGAVLRGPHQSGCTISF*YRISCR
Trigger: CCTGCATGATATGCGGTACCAAAAGCTGATTGTGCA...CCCACTCTGATGAGGCCCCCTGAGGACAGCACCCTGACCACCCTGCATGATATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439711.6
CDS-3UTR CCA 90 bp CCTTGTTCTCACGTGGAGGTGGCGCATGTCTATGAGACACAGTACCCCACTCAGACCCTTGTTCTCACGTaGAGGTGGCGCATGTCTATG +
Preference number: 4 (lower is better)
Translates to: PCSHVEVAHVYETQYPTQTLVLT*RWRMSM
Trigger: CATAGACATGCGCCACCTCCACGTGAGAACAAGGGT...CTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTGAGAACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp CCGTCCACTTTTCCTCATGCATTAACCGCTCTAGGAGCAGAGCAGGCTTTGTGCTCCAGCAGTTATGGCTaGGGAGGAATGCCGTCCACT +
Preference number: 4 (lower is better)
Translates to: PSTFPHALTALGAEQALCSSSYG*GGMPST
Trigger: AGTGGACGGCATTCCTCCCCAGCCATAACTGCTGGA...GCACAAAGCCTGCTCTGCTCCTAGAGCGGTTAATGCATGAGGAAAAGTGGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433720.1
CDS-3UTR TCA 90 bp CAGTACCCCACTCAGCGATCCTCTGCAGTCCAGGAAATTCTAGCACTTGCTTGGCCTGCTCCCGAGAGATaGTCCCATGAAACTCTCTTC +
Preference number: 4 (lower is better)
Translates to: QYPTQRSSAVQEILALAWPAPER*SHETLF
Trigger: GAAGAGAGTTTCATGGGATCATCTCTCGGGAGCAGG...CCAAGCAAGTGCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTGGGGTACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222792.11
CDS-3UTR TCA 90 bp CCGCATATCATGCAGGGTGGTCAGGGTGCTGTCCTCAGGGGGCCTCATCAGAGTGTGTCTTCTCATAATTaGAGTGGTTGTCGTTGTGTG +
Preference number: 4 (lower is better)
Translates to: PHIMQGGQGAVLRGPHQSVSSHN*SGCRCV
Trigger: CACACAACGACAACCACTTCAATTATGAGAAGACAC...ACTCTGATGAGGCCCCCTGAGGACAGCACCCTGACCACCCTGCATGATATGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439711.6
CDS-3UTR TCA 90 bp CCAATGGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAGGTGTCACAGCAAAATaGGGGACAAGGTACACAGGG +
Preference number: 4 (lower is better)
Translates to: PMESICIALGTVQVNSHTGVTAK*GTRYTG
Trigger: CCCTGTGTACCTTGTCCCTCATTTTGCTGTGACACC...TGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCCATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp CAGTACCCCACTCAGCGATCCTCTGCAGTCCAGGAAATTCTAGCACTTGCTTGGGGTGTCACAGCAAAATaGGGGACAAGGTACACAGGG +
Preference number: 4 (lower is better)
Translates to: QYPTQRSSAVQEILALAWGVTAK*GTRYTG
Trigger: CCCTGTGTACCTTGTCCCTCATTTTGCTGTGACACC...CCAAGCAAGTGCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTGGGGTACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp CAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGTCAGCAGGGTGGTCAGGGTaGTGTCCTCAGGGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: QGAGEISLKSTEEDRGMSAGWSG*CPQGAS
Trigger: TGAGGCCCCCTGAGGACAGCACCCTGACCACCCTGC...TGACATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp GGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAATGATTGGTACCGCATATCATaGAGGGTGGTCAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GVHLHSPWDCPGQQSHNDWYRIS*RVVRVL
Trigger: CAGCACCCTGACCACCCTGCATGATATGCGGTACCA...ATCATTGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp ATAATTGAAGTGGTTGTCGTTGTGTGTGAGGGCAGCCCTTCGAACCAGGGAGGAATTCCACCCTGGGGCTaGTTGCTTCTTCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: IIEVVVVVCEGSPSNQGGIPPWG*LLLPAW
Trigger: CCATGCTGGAAGAAGCAAGCAGCCCCAGGGTGGAAT...TCCTCCCTGGTTCGAAGGGCTGCCCTCACACACAACGACAACCACTTCAATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474070.5
CDS-3UTR CCA 90 bp CAGTACCCCACTCAGCGATCCTCTGCAGTCCAGGAAATTCTAGCACTTGCTTGGGGGCCTCGGAACGTGTaGACCTTAAAGTTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: QYPTQRSSAVQEILALAWGPRNV*TLKLCV
Trigger: GACACACAACTTTAAGGTCCACACGTTCCGAGGCCC...CCAAGCAAGTGCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTGGGGTACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp ACACAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGGAGCACCGGACCCCTTaGGCGATGAGCCCCCACATG +
Preference number: 4 (lower is better)
Translates to: TQGAGEISLKSTEEDRGMEHRTP*AMSPHM
Trigger: CATGTGGGGGCTCATCGCCCAAGGGGTCCGGTGCTC...CATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp CAGTACCCCACTCAGCGATCCTCTGCAGTCCAGGAAATTCTAGCACTTGCTTGGAGCATCAGCACTTCATaGACGGCTTCCAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: QYPTQRSSAVQEILALAWSISTS*TASSLS
Trigger: TGAGAGGCTGGAAGCCGTCCATGAAGTGCTGATGCT...CCAAGCAAGTGCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTGGGGTACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp TGGCACAGTGAAACTCCAGCAGTTATGGCTGGGGAGGAATGCCGTCCACTTTTCAGCATCAGCACTTCATaGACGGCTTCCAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: WHSETPAVMAGEECRPLFSISTS*TASSLS
Trigger: TGAGAGGCTGGAAGCCGTCCATGAAGTGCTGATGCT...GAAAAGTGGACGGCATTCCTCCCCAGCCATAACTGCTGGAGTTTCACTGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433720.1
CDS-3UTR CCA 90 bp CAGTACCCCACTCAGCGATCCTCTGCAGTCCAGGAAATTCTAGCACTTGCTTGGGTTCTCACGTGGAGGTaGCGCATGTCTATGAGACAC +
Preference number: 4 (lower is better)
Translates to: QYPTQRSSAVQEILALAWVLTWR*RMSMRH
Trigger: GTGTCTCATAGACATGCGCCACCTCCACGTGAGAAC...CCAAGCAAGTGCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTGGGGTACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp CAGTACCCCACTCAGCGATCCTCTGCAGTCCAGGAAATTCTAGCACTTGCTTGGACCCTTGTTCTCACGTaGAGGTGGCGCATGTCTATG +
Preference number: 4 (lower is better)
Translates to: QYPTQRSSAVQEILALAWTLVLT*RWRMSM
Trigger: CATAGACATGCGCCACCTCCACGTGAGAACAAGGGT...CCAAGCAAGTGCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTGGGGTACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp GGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAATGATACGGCCAGCAGTTCTTaGCGTTTCCTGCCCTGCTTA +
Preference number: 4 (lower is better)
Translates to: GVHLHSPWDCPGQQSHNDTASSS*RFLPCL
Trigger: TAAGCAGGGCAGGAAACGCCAAGAACTGCTGGCCGT...ATCATTGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp CCTTGTTCTCACGTGGAGGTGGCGCATGTCTATGAGACACAGTACCCCACTCAGAGGCCGACGTGCGCCTaGAACAATAGCAAACATTCA +
Preference number: 4 (lower is better)
Translates to: PCSHVEVAHVYETQYPTQRPTCA*NNSKHS
Trigger: TGAATGTTTGCTATTGTTCCAGGCGCACGTCGGCCT...CTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTGAGAACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412711.6
CDS-3UTR CCA 90 bp CCTCATGCATTAACCGCTCTAGGAGCAGAGCAGGCTTTGTGCACGAGACATGAGAAACTCCAGCAGTTATaGCTGGGGAGGAATGCCGTC +
Preference number: 4 (lower is better)
Translates to: PHALTALGAEQALCTRHEKLQQL*LGRNAV
Trigger: GACGGCATTCCTCCCCAGCCATAACTGCTGGAGTTT...CTCATGTCTCGTGCACAAAGCCTGCTCTGCTCCTAGAGCGGTTAATGCATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433720.1
CDS-3UTR CCA 90 bp TCCAGCAGTTATGGCTGGGGAGGAATGCCGTCCACTTTTCCTCATGCATTAACCCGTGAGCCATCACAGTaGCGCCCCTTTCATAGGGAT +
Preference number: 4 (lower is better)
Translates to: SSSYGWGGMPSTFPHALTREPSQ*RPFHRD
Trigger: ATCCCTATGAAAGGGGCGCCACTGTGATGGCTCACG...GGTTAATGCATGAGGAAAAGTGGACGGCATTCCTCCCCAGCCATAACTGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433720.1
CDS-3UTR TCA 90 bp CACTCTTCCAGCAAACCAGACATACATAGGAGGCACAGCAAAAGACCCAAGGTGGGTGGCGCATGTCTATaGGACACAGTACCCCACTCA +
Preference number: 4 (lower is better)
Translates to: HSSSKPDIHRRHSKRPKVGGACL*DTVPHS
Trigger: TGAGTGGGGTACTGTGTCTCATAGACATGCGCCACC...CACCTTGGGTCTTTTGCTGTGCCTCCTATGTATGTCTGGTTTGCTGGAAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp CAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGTCACTGAAAGGCCCAGTTTaGGTGATGGAGGGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: QGAGEISLKSTEEDRGMSLKGPV*VMEGAR
Trigger: CCGGGCCCCCTCCATCACTCAAACTGGGCCTTTCAG...TGACATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000412711.6
CDS-3UTR TCA 90 bp TCGAACCAGGGAGGAGATCTTTTCCACCGCTGTGTGTTCTTCATGTGTGACGTTGTATTCTTCAGCATCTaGATGGCACCCCGCCGATGC +
Preference number: 4 (lower is better)
Translates to: SNQGGDLFHRCVFFMCDVVFFSI*MAPRRC
Trigger: GCATCGGCGGGGTGCCATTCAGATGCTGAAGAATAC...AACGTCACACATGAAGAACACACAGCGGTGGAAAAGATCTCCTCCCTGGTTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474070.5
CDS-3UTR GCA 90 bp GAGGGACAAGGTACACAGGGTAATAACCAATGCACTGCATTGAGTTCTATTTGCCGGACAGGCTGGAGTTaGTGGACGCTGCCATCTCCG +
Preference number: 4 (lower is better)
Translates to: EGQGTQGNNQCTALSSICRTGWS*WTLPSP
Trigger: CGGAGATGGCAGCGTCCAGCAACTCCAGCCTGTCCG...GCAAATAGAACTCAATGCAGTGCATTGGTTATTACCCTGTGTACCTTGTCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222792.11
CDS-3UTR GCA 90 bp CACTCTTCCAGCAAACCAGACATACATAGGAGGCACAGCAAAAGACCCAAGGTGTGGTACCGCATATCATaGAGGGTGGTCAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: HSSSKPDIHRRHSKRPKVWYRIS*RVVRVL
Trigger: CAGCACCCTGACCACCCTGCATGATATGCGGTACCA...CACCTTGGGTCTTTTGCTGTGCCTCCTATGTATGTCTGGTTTGCTGGAAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp GGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAATGATTGGCGTTTCCTGCCCTaGTTAGACTTCCGAACCACA +
Preference number: 4 (lower is better)
Translates to: GVHLHSPWDCPGQQSHNDWRFLP*LDFRTT
Trigger: TGTGGTTCGGAAGTCTAAGCAGGGCAGGAAACGCCA...ATCATTGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp CCTTGTTCTCACGTGGAGGTGGCGCATGTCTATGAGACACAGTACCCCACTCAGGATGGGCCTGTTTTGTaGTATTTCTTAAGGCCGACG +
Preference number: 4 (lower is better)
Translates to: PCSHVEVAHVYETQYPTQDGPVL*YFLRPT
Trigger: CGTCGGCCTTAAGAAATAGCACAAAACAGGCCCATC...CTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTGAGAACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412711.6
CDS-3UTR GCA 90 bp CCGTCCACTTTTCCTCATGCATTAACCGCTCTAGGAGCAGAGCAGGCTTTGTGCGCAGAGCAGGCTTTGTaGACGAGACATGAGCTTACT +
Preference number: 4 (lower is better)
Translates to: PSTFPHALTALGAEQALCAEQAL*TRHELT
Trigger: AGTAAGCTCATGTCTCGTGCACAAAGCCTGCTCTGC...GCACAAAGCCTGCTCTGCTCCTAGAGCGGTTAATGCATGAGGAAAAGTGGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433720.1
CDS-3UTR CCA 90 bp CACGTGGAGGTGGCGCATGTCTATGAGACACAGTACCCCACTCAGCGATCCTCTTTCCATATAGGAGGCTaGTATTCTTCAGCATCGGAG +
Preference number: 4 (lower is better)
Translates to: HVEVAHVYETQYPTQRSSFHIGG*YSSASE
Trigger: CTCCGATGCTGAAGAATACCAGCCTCCTATATGGAA...AGAGGATCGCTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222792.11
CDS-3UTR CCA 90 bp CCACGTAAAATAGTCATTCTCTTCTGCTCACTCCAAAGCAAGACTGGTGAGTTTGAGCACCGGACCCCTTaGGCGATGAGCCCCCACATG +
Preference number: 4 (lower is better)
Translates to: PRKIVILFCSLQSKTGEFEHRTP*AMSPHM
Trigger: CATGTGGGGGCTCATCGCCCAAGGGGTCCGGTGCTC...AAACTCACCAGTCTTGCTTTGGAGTGAGCAGAAGAGAATGACTATTTTACGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp CACAATCAGCTTTTGGTACCGCATATCATGCAGGGTGGTCAGGGTGCTGTCCTCCAGGTTGGCAGTCATTaGGAACGTGCTTGGAACACT +
Preference number: 4 (lower is better)
Translates to: HNQLLVPHIMQGGQGAVLQVGSH*ERAWNT
Trigger: AGTGTTCCAAGCACGTTCCCAATGACTGCCAACCTG...GAGGACAGCACCCTGACCACCCTGCATGATATGCGGTACCAAAAGCTGATTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439711.6
CDS-3UTR CCA 90 bp CAGTACCCCACTCAGCGATCCTCTGCAGTCCAGGAAATTCTAGCACTTGCTTGGCTCTTGAGATCAGGTTaGCAGTCATTGGGAACGTGC +
Preference number: 4 (lower is better)
Translates to: QYPTQRSSAVQEILALAWLLRSG*QSLGTC
Trigger: GCACGTTCCCAATGACTGCCAACCTGATCTCAAGAG...CCAAGCAAGTGCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTGGGGTACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR CCA 90 bp GGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAATGATACCCTTGTTCTCACGTaGAGGTGGCGCATGTCTATG +
Preference number: 4 (lower is better)
Translates to: GVHLHSPWDCPGQQSHNDTLVLT*RWRMSM
Trigger: CATAGACATGCGCCACCTCCACGTGAGAACAAGGGT...ATCATTGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp CACGTGGAGGTGGCGCATGTCTATGAGACACAGTACCCCACTCAGCGATCCTCTGTGTCTTCTCATAATTaGAGTGGTTGTCGTTGTGTG +
Preference number: 4 (lower is better)
Translates to: HVEVAHVYETQYPTQRSSVSSHN*SGCRCV
Trigger: CACACAACGACAACCACTTCAATTATGAGAAGACAC...AGAGGATCGCTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp AGTTATGGCTGGGGAGGAATGCCGTCCACTTTTCCTCATGCATTAACCGCTCTATGGTTCCTGGCACAGTaGAACTCCAGCAGTTATGGC +
Preference number: 4 (lower is better)
Translates to: SYGWGGMPSTFPHALTALWFLAQ*NSSSYG
Trigger: GCCATAACTGCTGGAGTTTCACTGTGCCAGGAACCA...TAGAGCGGTTAATGCATGAGGAAAAGTGGACGGCATTCCTCCCCAGCCATAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433720.1
CDS-3UTR GCA 90 bp CACGTGGAGGTGGCGCATGTCTATGAGACACAGTACCCCACTCAGCGATCCTCTCTTCAATTTCCCGAATaGATATGTCTACCACCATGG +
Preference number: 4 (lower is better)
Translates to: HVEVAHVYETQYPTQRSSLQFPE*ICLPPW
Trigger: CCATGGTGGTAGACATATGCATTCGGGAAATTGAAG...AGAGGATCGCTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR GCA 90 bp ATGCAGGGTGGTCAGGGTGCTGTCCTCAGGGGGCCTCATCAGAGTGGGCCCAAAGATCCCCAGATTTTCTaGATTCATGAAATTGTCTTT +
Preference number: 4 (lower is better)
Translates to: MQGGQGAVLRGPHQSGPKDPQIF*IHEIVF
Trigger: AAAGACAATTTCATGAATGCAGAAAATCTGGGGATC...TTTGGGCCCACTCTGATGAGGCCCCCTGAGGACAGCACCCTGACCACCCTGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439711.6
CDS-3UTR GCA 90 bp CCTCATGCATTAACCGCTCTAGGAGCAGAGCAGGCTTTGTGCACGAGACATGAGGTCCACTTTTCCTCATaGATTAACCGCTCTAGGAGC +
Preference number: 4 (lower is better)
Translates to: PHALTALGAEQALCTRHEVHFSS*INRSRS
Trigger: GCTCCTAGAGCGGTTAATGCATGAGGAAAAGTGGAC...CTCATGTCTCGTGCACAAAGCCTGCTCTGCTCCTAGAGCGGTTAATGCATGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433720.1
CDS-3UTR CCA 90 bp CACTCTTCCAGCAAACCAGACATACATAGGAGGCACAGCAAAAGACCCAAGGTGGGGCCTCGGAACGTGTaGACCTTAAAGTTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: HSSSKPDIHRRHSKRPKVGPRNV*TLKLCV
Trigger: GACACACAACTTTAAGGTCCACACGTTCCGAGGCCC...CACCTTGGGTCTTTTGCTGTGCCTCCTATGTATGTCTGGTTTGCTGGAAGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp CAAGATAATACTGCATTTGTGGTCAGCTTTTTCAGGGTGTCACAGCAAAATGAGGAGCACCGGACCCCTTaGGCGATGAGCCCCCACATG +
Preference number: 4 (lower is better)
Translates to: QDNTAFVVSFFRVSQQNEEHRTP*AMSPHM
Trigger: CATGTGGGGGCTCATCGCCCAAGGGGTCCGGTGCTC...CTCATTTTGCTGTGACACCCTGAAAAAGCTGACCACAAATGCAGTATTATCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp GGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAATGATCAACTTGGATGGTGCTaGGGCCATTCAGCTCATTTC +
Preference number: 4 (lower is better)
Translates to: GVHLHSPWDCPGQQSHNDQLGWC*GHSAHF
Trigger: GAAATGAGCTGAATGGCCCCAGCACCATCCAAGTTG...ATCATTGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp ACACAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGGGTTGTCGTTGTGTGTaGGGGCAGCCCTTCGAACCA +
Preference number: 4 (lower is better)
Translates to: TQGAGEISLKSTEEDRGMGCRCV*GQPFEP
Trigger: TGGTTCGAAGGGCTGCCCTCACACACAACGACAACC...CATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp GTTGTCGTTGTGTGTGAGGGCAGCCCTTCGAACCAGGGAGGAGATCTTTTCCACGTGTCTTCTCATAATTaGAGTGGTTGTCGTTGTGTG +
Preference number: 4 (lower is better)
Translates to: VVVVCEGSPSNQGGDLFHVSSHN*SGCRCV
Trigger: CACACAACGACAACCACTTCAATTATGAGAAGACAC...GTGGAAAAGATCTCCTCCCTGGTTCGAAGGGCTGCCCTCACACACAACGACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474070.5
CDS-3UTR TCA 90 bp CCACGTAAAATAGTCATTCTCTTCTGCTCACTCCAAAGCAAGACTGGTGAGTTTGTTCAATCCACAGTCTaGGCACCGGACCCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: PRKIVILFCSLQSKTGEFVQSTV*APDPLG
Trigger: GCCCAAGGGGTCCGGTGCTCAGACTGTGGATTGAAC...AAACTCACCAGTCTTGCTTTGGAGTGAGCAGAAGAGAATGACTATTTTACGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR TCA 90 bp CAGTACCCCACTCAGCGATCCTCTGCAGTCCAGGAAATTCTAGCACTTGCTTGGCCTTCACAAGTGTTGTaGGGTCACAACAGTACACTT +
Preference number: 4 (lower is better)
Translates to: QYPTQRSSAVQEILALAWPSQVL*GHNSTL
Trigger: AAGTGTACTGTTGTGACCTCACAACACTTGTGAAGG...CCAAGCAAGTGCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTGGGGTACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR TCA 90 bp AGCTTTTGGTACCGCATATCATGCAGGGTGGTCAGGGTGCTGTCCTCAGGGGGCTGTCAAATGCCATTTTaGCATCTTCAATGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: SFWYRISCRVVRVLSSGGCQMPF*HLQCVQ
Trigger: CTGAACACATTGAAGATGTCAAAATGGCATTTGACA...GCCCCCTGAGGACAGCACCCTGACCACCCTGCATGATATGCGGTACCAAAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439711.6
CDS-3UTR TCA 90 bp ACACAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGGCAAAAGACCCAAGGTaGGGGGCTTCCCTCACCTTC +
Preference number: 4 (lower is better)
Translates to: TQGAGEISLKSTEEDRGMAKDPR*GASLTF
Trigger: GAAGGTGAGGGAAGCCCCTCACCTTGGGTCTTTTGC...CATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp CACGTGGAGGTGGCGCATGTCTATGAGACACAGTACCCCACTCAGCGATCCTCTTTTGATATTAACAGATaGATTCAGAGGGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: HVEVAHVYETQYPTQRSSFDINR*IQRAWP
Trigger: TGGCCAAGCCCTCTGAATTCATCTGTTAATATCAAA...AGAGGATCGCTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp CCTTGTTCTCACGTGGAGGTGGCGCATGTCTATGAGACACAGTACCCCACTCAGCCAAAGCAAGACTGGTaGGTTTACACAAATCATCTC +
Preference number: 4 (lower is better)
Translates to: PCSHVEVAHVYETQYPTQPKQDW*VYTNHL
Trigger: GAGATGATTTGTGTAAACTCACCAGTCTTGCTTTGG...CTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTGAGAACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp CCACGTAAAATAGTCATTCTCTTCTGCTCACTCCAAAGCAAGACTGGTGAGTTTGCAGCCTCCGGCATGTaGCCTGAAAGGCCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: PRKIVILFCSLQSKTGEFAASGM*PERPSL
Trigger: CAAACTGGGCCTTTCAGGTCACATGCCGGAGGCTGC...AAACTCACCAGTCTTGCTTTGGAGTGAGCAGAAGAGAATGACTATTTTACGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412711.6
CDS-3UTR TCA 90 bp GAGGGACAAGGTACACAGGGTAATAACCAATGCACTGCATTGAGTTCTATTTGCGTTAGGCGGCAGATTTaGGGCAGCTGGGTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: EGQGTQGNNQCTALSSICVRRQI*GSWVLS
Trigger: AGACAGGACCCAGCTGCCTCAAATCTGCCGCCTAAC...GCAAATAGAACTCAATGCAGTGCATTGGTTATTACCCTGTGTACCTTGTCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412711.6
CDS-3UTR TCA 90 bp ACAGTGAAACTCCAGCAGTTATGGCTGGGGAGGAATGCCGTCCACTTTTCCTCAATAGGGATGATACACTaGAAGTGCCTGGAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: TVKLQQLWLGRNAVHFSSIGMIH*KCLEWF
Trigger: GAACCACTCCAGGCACTTTCAGTGTATCATCCCTAT...TGAGGAAAAGTGGACGGCATTCCTCCCCAGCCATAACTGCTGGAGTTTCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433720.1
CDS-3UTR GCA 90 bp CAGTACCCCACTCAGCGATCCTCTGCAGTCCAGGAAATTCTAGCACTTGCTTGGCAGTCATTGGGAACGTaGTTGGAACACTGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: QYPTQRSSAVQEILALAWQSLGT*LEHCLC
Trigger: ACACAAACAGTGTTCCAAGCACGTTCCCAATGACTG...CCAAGCAAGTGCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTGGGGTACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR GCA 90 bp AATGACCGCATTCTGTATCTTCTGGGATACACACTCATGATACGAAAAGACTATGCAGGGTGGTCAGGGTaGTGTCCTCAGGGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: NDRILYLLGYTLMIRKDYAGWSG*CPQGAS
Trigger: TGAGGCCCCCTGAGGACAGCACCCTGACCACCCTGC...ATAGTCTTTTCGTATCATGAGTGTGTATCCCAGAAGATACAGAATGCGGTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp CACGTGGAGGTGGCGCATGTCTATGAGACACAGTACCCCACTCAGCGATCCTCTATAGTCATTCTCTTCTaGTCACTCCAAAGCAAGACT +
Preference number: 4 (lower is better)
Translates to: HVEVAHVYETQYPTQRSSIVILF*SLQSKT
Trigger: AGTCTTGCTTTGGAGTGAGCAGAAGAGAATGACTAT...AGAGGATCGCTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp TGGTTGTCGTTGTGTGTGAGGGCAGCCCTTCGAACCAGGGAGGAGATCTTTTCCATGGCACCCCGCCGATaGTCTTCATTAATTTTTAAG +
Preference number: 4 (lower is better)
Translates to: WLSLCVRAALRTREEIFSMAPRR*SSLIFK
Trigger: CTTAAAAATTAATGAAGAGCATCGGCGGGGTGCCAT...GGAAAAGATCTCCTCCCTGGTTCGAAGGGCTGCCCTCACACACAACGACAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474070.5
CDS-3UTR CCA 90 bp CAGTACCCCACTCAGCGATCCTCTGCAGTCCAGGAAATTCTAGCACTTGCTTGGATATGTCTACCACCATaGGTCTCTGAGTGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: QYPTQRSSAVQEILALAWICLPP*VSECCE
Trigger: CTCACAACACTCAGAGACCCATGGTGGTAGACATAT...CCAAGCAAGTGCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTGGGGTACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR CCA 90 bp CACGTGGAGGTGGCGCATGTCTATGAGACACAGTACCCCACTCAGCGATCCTCTTGTCTGGATAGACATTaGCAGATATATCGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: HVEVAHVYETQYPTQRSSCLDRH*QIYRPF
Trigger: AAAAGGCCGATATATCTGCCAATGTCTATCCAGACA...AGAGGATCGCTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222792.11
ENST00000412711.6
CDS-3UTR CCA 90 bp CCAATGGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACATGCACAATCAGCTTTTaGTACCGCATATCATGCAGG +
Preference number: 4 (lower is better)
Translates to: PMESICIALGTVQVNSHTCTISF*YRISCR
Trigger: CCTGCATGATATGCGGTACCAAAAGCTGATTGTGCA...TGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCCATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp CAGTACCCCACTCAGCGATCCTCTGCAGTCCAGGAAATTCTAGCACTTGCTTGGTGCACAATCAGCTTTTaGTACCGCATATCATGCAGG +
Preference number: 4 (lower is better)
Translates to: QYPTQRSSAVQEILALAWCTISF*YRISCR
Trigger: CCTGCATGATATGCGGTACCAAAAGCTGATTGTGCA...CCAAGCAAGTGCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTGGGGTACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp CACGTGGAGGTGGCGCATGTCTATGAGACACAGTACCCCACTCAGCGATCCTCTTGCATAGAAAGTGTGTaGACATTTCAGACCATCCTA +
Preference number: 4 (lower is better)
Translates to: HVEVAHVYETQYPTQRSSCIESV*TFQTIL
Trigger: TAGGATGGTCTGAAATGTCCACACACTTTCTATGCA...AGAGGATCGCTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp GTTGTGTGTGAGGGCAGCCCTTCGAACCAGGGAGGAGATCTTTTCCACCGCTGTGCCTCTTGCTGTAACTaGTATAAGTATGATTTCCAT +
Preference number: 4 (lower is better)
Translates to: VVCEGSPSNQGGDLFHRCASCCN*YKYDFH
Trigger: ATGGAAATCATACTTATATCAGTTACAGCAAGAGGC...ACAGCGGTGGAAAAGATCTCCTCCCTGGTTCGAAGGGCTGCCCTCACACACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474070.5
CDS-3UTR TCA 90 bp GAGGGACAAGGTACACAGGGTAATAACCAATGCACTGCATTGAGTTCTATTTGCCCTCCCGAGGACAAATaGTTCTCTTGGGACGAGGTG +
Preference number: 4 (lower is better)
Translates to: EGQGTQGNNQCTALSSICPPEDK*FSWDEV
Trigger: CACCTCGTCCCAAGAGAATCATTTGTCCTCGGGAGG...GCAAATAGAACTCAATGCAGTGCATTGGTTATTACCCTGTGTACCTTGTCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222792.11
CDS-3UTR TCA 90 bp CACGTGGAGGTGGCGCATGTCTATGAGACACAGTACCCCACTCAGCGATCCTCTTGTGTTCTTCATGTGTaGCGTTTGTTTTTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: HVEVAHVYETQYPTQRSSCVLHV*RLFFLV
Trigger: AACCAAGAAAAACAAACGTCACACATGAAGAACACA...AGAGGATCGCTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222792.11
CDS-3UTR TCA 90 bp CACGTGGAGGTGGCGCATGTCTATGAGACACAGTACCCCACTCAGCGATCCTCTTTCAGCTCATTTCCCTaGTGGATTAGAATAAAACGT +
Preference number: 4 (lower is better)
Translates to: HVEVAHVYETQYPTQRSSFSSFP*WIRIKR
Trigger: ACGTTTTATTCTAATCCATCAGGGAAATGAGCTGAA...AGAGGATCGCTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp CAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGTCAGGTGGCGCATGTCTATaGGACACAGTACCCCACTCA +
Preference number: 4 (lower is better)
Translates to: QGAGEISLKSTEEDRGMSGGACL*DTVPHS
Trigger: TGAGTGGGGTACTGTGTCTCATAGACATGCGCCACC...TGACATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp CACGTGGAGGTGGCGCATGTCTATGAGACACAGTACCCCACTCAGCGATCCTCTATAGAAATCTTGGTGTaGAAGGCTCATGCTAAGATA +
Preference number: 4 (lower is better)
Translates to: HVEVAHVYETQYPTQRSSIEILV*KAHAKI
Trigger: TATCTTAGCATGAGCCTTTCACACCAAGATTTCTAT...AGAGGATCGCTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp GAGGGACAAGGTACACAGGGTAATAACCAATGCACTGCATTGAGTTCTATTTGCAAAGAAAGCCGCCTTTaGCACCCACCTTCACCCCGA +
Preference number: 4 (lower is better)
Translates to: EGQGTQGNNQCTALSSICKESRL*HPPSPR
Trigger: TCGGGGTGAAGGTGGGTGTCAAAGGCGGCTTTCTTT...GCAAATAGAACTCAATGCAGTGCATTGGTTATTACCCTGTGTACCTTGTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp CCACGTAAAATAGTCATTCTCTTCTGCTCACTCCAAAGCAAGACTGGTGAGTTTAGGGGGCCCGGCTTCTaGATAAGGATGGGCCTGTTT +
Preference number: 4 (lower is better)
Translates to: PRKIVILFCSLQSKTGEFRGPGF*IRMGLF
Trigger: AAACAGGCCCATCCTTATTCAGAAGCCGGGCCCCCT...AAACTCACCAGTCTTGCTTTGGAGTGAGCAGAAGAGAATGACTATTTTACGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412711.6
CDS-3UTR TCA 90 bp GTGAAACTCCAGCAGTTATGGCTGGGGAGGAATGCCGTCCACTTTTCCTCATGCCATGAGCTTACTTTTTaGGGTGGATCATTAGGTACC +
Preference number: 4 (lower is better)
Translates to: VKLQQLWLGRNAVHFSSCHELTF*GGSLGT
Trigger: GGTACCTAATGATCCACCTCAAAAAGTAAGCTCATG...GCATGAGGAAAAGTGGACGGCATTCCTCCCCAGCCATAACTGCTGGAGTTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433720.1
CDS-3UTR TCA 90 bp TTATGGCTGGGGAGGAATGCCGTCCACTTTTCCTCATGCATTAACCGCTCTAGGTTTGTGCACGAGACATaGGCTTACTTTTTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LWLGRNAVHFSSCINRSRFVHET*AYFLRW
Trigger: CCACCTCAAAAAGTAAGCTCATGTCTCGTGCACAAA...CCTAGAGCGGTTAATGCATGAGGAAAAGTGGACGGCATTCCTCCCCAGCCATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433720.1
CDS-3UTR TCA 90 bp TGTGTGACGTTTGTTTTTCTTGGTTCATTTTTAGACCTGCTCAGCCTTCTGGATTGGGAAGCGCTGACTTaGTGCGGCCAGGTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: CVTFVFLGSFLDLLSLLDWEALT*CGQVSG
Trigger: CCCAGAAACCTGGCCGCATCAAGTCAGCGCTTCCCA...ATCCAGAAGGCTGAGCAGGTCTAAAAATGAACCAAGAAAAACAAACGTCACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474070.5
CDS-3UTR GCA 90 bp GAGGGACAAGGTACACAGGGTAATAACCAATGCACTGCATTGAGTTCTATTTGCTGGTACCGCATATCATaGAGGGTGGTCAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: EGQGTQGNNQCTALSSICWYRIS*RVVRVL
Trigger: CAGCACCCTGACCACCCTGCATGATATGCGGTACCA...GCAAATAGAACTCAATGCAGTGCATTGGTTATTACCCTGTGTACCTTGTCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp CAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGTCATGGTACCGCATATCATaGAGGGTGGTCAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: QGAGEISLKSTEEDRGMSWYRIS*RVVRVL
Trigger: CAGCACCCTGACCACCCTGCATGATATGCGGTACCA...TGACATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp CAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGTCACAGCCTGCTTTCTCCTaGCGCAGCACATTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: QGAGEISLKSTEEDRGMSQPAFS*RSTLQR
Trigger: CCTTTGCAATGTGCTGCGGCAGGAGAAAGCAGGCTG...TGACATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412711.6
CDS-3UTR GCA 90 bp CACTCTTCCAGCAAACCAGACATACATAGGAGGCACAGCAAAAGACCCAAGGTGTTCTTAAGGCCGACGTaGGCCTGGAACAATAGCAAA +
Preference number: 4 (lower is better)
Translates to: HSSSKPDIHRRHSKRPKVFLRPT*AWNNSK
Trigger: TTTGCTATTGTTCCAGGCGCACGTCGGCCTTAAGAA...CACCTTGGGTCTTTTGCTGTGCCTCCTATGTATGTCTGGTTTGCTGGAAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412711.6
CDS-3UTR CCA 90 bp GGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAATGATATATGTCTACCACCATaGGTCTCTGAGTGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: GVHLHSPWDCPGQQSHNDICLPP*VSECCE
Trigger: CTCACAACACTCAGAGACCCATGGTGGTAGACATAT...ATCATTGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR CCA 90 bp GGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAATGATTGCACAATCAGCTTTTaGTACCGCATATCATGCAGG +
Preference number: 4 (lower is better)
Translates to: GVHLHSPWDCPGQQSHNDCTISF*YRISCR
Trigger: CCTGCATGATATGCGGTACCAAAAGCTGATTGTGCA...ATCATTGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp GTTGTCGTTGTGTGTGAGGGCAGCCCTTCGAACCAGGGAGGAGATCTTTTCCACTTCCATATAGGAGGCTaGTATTCTTCAGCATCTGAA +
Preference number: 4 (lower is better)
Translates to: VVVVCEGSPSNQGGDLFHFHIGG*YSSASE
Trigger: TTCAGATGCTGAAGAATACCAGCCTCCTATATGGAA...GTGGAAAAGATCTCCTCCCTGGTTCGAAGGGCTGCCCTCACACACAACGACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474070.5
CDS-3UTR TCA 90 bp GTTGTCGTTGTGTGTGAGGGCAGCCCTTCGAACCAGGGAGGAGATCTTTTCCACGTTAGTTGTCATTTTTaGAATGTACTCGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: VVVVCEGSPSNQGGDLFHVSCHF*NVLGSF
Trigger: AAAGCTGCCGAGTACATTTCAAAAATGACAACTAAC...GTGGAAAAGATCTCCTCCCTGGTTCGAAGGGCTGCCCTCACACACAACGACAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474070.5
CDS-3UTR TCA 90 bp GGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAATGATTGGATACTTTTTCTCTaGGTAGGGTGGCATATCCAA +
Preference number: 4 (lower is better)
Translates to: GVHLHSPWDCPGQQSHNDWILFL*VGWHIQ
Trigger: TTGGATATGCCACCCTACTCAGAGAAAAAGTATCCA...ATCATTGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222792.11
CDS-3UTR TCA 90 bp GTGGTTGTCGTTGTGTGTGAGGGCAGCCCTTCGAACCAGGGAGGAGATCTTTTCTGTGTTCTTCATGTGTaGCGTTTGTTTTTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: VVVVVCEGSPSNQGGDLFCVLHV*RLFFLV
Trigger: AACCAAGAAAAACAAACGTCACACATGAAGAACACA...GAAAAGATCTCCTCCCTGGTTCGAAGGGCTGCCCTCACACACAACGACAACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474070.5
CDS-3UTR TCA 90 bp GGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAATGATGTGTCTTCTCATAATTaGAGTGGTTGTCGTTGTGTG +
Preference number: 4 (lower is better)
Translates to: GVHLHSPWDCPGQQSHNDVSSHN*SGCRCV
Trigger: CACACAACGACAACCACTTCAATTATGAGAAGACAC...ATCATTGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp CAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGTCAGGTGTCACAGCAAAATaGGGGACAAGGTACACAGGG +
Preference number: 4 (lower is better)
Translates to: QGAGEISLKSTEEDRGMSGVTAK*GTRYTG
Trigger: CCCTGTGTACCTTGTCCCTCATTTTGCTGTGACACC...TGACATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp GGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAATGATTTCATTAAAAAGCACTaGGGAGGACAGAGGTATGTC +
Preference number: 4 (lower is better)
Translates to: GVHLHSPWDCPGQQSHNDFIKKH*GGQRYV
Trigger: GACATACCTCTGTCCTCCTCAGTGCTTTTTAATGAA...ATCATTGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp GGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAATGATTGGGATACACACTCATaGTACGAAAAGACTATGACC +
Preference number: 4 (lower is better)
Translates to: GVHLHSPWDCPGQQSHNDWDTHS*YEKTMT
Trigger: GGTCATAGTCTTTTCGTATCATGAGTGTGTATCCCA...ATCATTGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp CCTTGTTCTCACGTGGAGGTGGCGCATGTCTATGAGACACAGTACCCCACTCAGATAGAAATCTTGGTGTaGAAGGCTCATGCTAAGATA +
Preference number: 4 (lower is better)
Translates to: PCSHVEVAHVYETQYPTQIEILV*KAHAKI
Trigger: TATCTTAGCATGAGCCTTTCACACCAAGATTTCTAT...CTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTGAGAACAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp CCACGTAAAATAGTCATTCTCTTCTGCTCACTCCAAAGCAAGACTGGTGAGTTTAGAAGCTCATCCGCCTaGTCCCGAGAGATGATCCCA +
Preference number: 4 (lower is better)
Translates to: PRKIVILFCSLQSKTGEFRSSSA*SREMIP
Trigger: TGGGATCATCTCTCGGGAGCAGGCGGATGAGCTTCT...AAACTCACCAGTCTTGCTTTGGAGTGAGCAGAAGAGAATGACTATTTTACGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222792.11
CDS-3UTR GCA 90 bp CAGTACCCCACTCAGCGATCCTCTGCAGTCCAGGAAATTCTAGCACTTGCTTGGATAGTCATTCTCTTCTaGTCACTCCAAAGCAAGACT +
Preference number: 4 (lower is better)
Translates to: QYPTQRSSAVQEILALAWIVILF*SLQSKT
Trigger: AGTCTTGCTTTGGAGTGAGCAGAAGAGAATGACTAT...CCAAGCAAGTGCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTGGGGTACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp ACACAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGGGTCAAACCTCCCTGTaGCAATGGAGTCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: TQGAGEISLKSTEEDRGMGQTSL*QWSPSA
Trigger: TGCAGATGGACTCCATTGGCACAGGGAGGTTTGACC...CATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp CCACGTAAAATAGTCATTCTCTTCTGCTCACTCCAAAGCAAGACTGGTGAGTTTCCTGCCGCAGCACATTaGAAAGGAGAGGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PRKIVILFCSLQSKTGEFPAAAH*KGEVSP
Trigger: AGGAGAGACCTCTCCTTTGCAATGTGCTGCGGCAGG...AAACTCACCAGTCTTGCTTTGGAGTGAGCAGAAGAGAATGACTATTTTACGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412711.6
CDS-3UTR GCA 90 bp CCACGTAAAATAGTCATTCTCTTCTGCTCACTCCAAAGCAAGACTGGTGAGTTTGCCCAGGAAGCCCTGTaGTGTCAGGATTTTCGAACC +
Preference number: 4 (lower is better)
Translates to: PRKIVILFCSLQSKTGEFAQEAL*CQDFRT
Trigger: GGTTCGAAAATCCTGACAGCACAGGGCTTCCTGGGC...AAACTCACCAGTCTTGCTTTGGAGTGAGCAGAAGAGAATGACTATTTTACGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412711.6
CDS-3UTR CCA 90 bp GAGGGACAAGGTACACAGGGTAATAACCAATGCACTGCATTGAGTTCTATTTGCGGGCCTCGGAACGTGTaGACCTTAAAGTTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: EGQGTQGNNQCTALSSICGPRNV*TLKLCV
Trigger: GACACACAACTTTAAGGTCCACACGTTCCGAGGCCC...GCAAATAGAACTCAATGCAGTGCATTGGTTATTACCCTGTGTACCTTGTCCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp CCAATGGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACATGTCTGGATAGACATTaGCAGATATATCGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: PMESICIALGTVQVNSHTCLDRH*QIYRPF
Trigger: AAAAGGCCGATATATCTGCCAATGTCTATCCAGACA...TGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCCATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222792.11
ENST00000412711.6
CDS-3UTR CCA 90 bp AGGAATGCCGTCCACTTTTCCTCATGCATTAACCGCTCTAGGAGCAGAGCAGGCTGTCTGGATAGACATTaGCAGATATATCGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: RNAVHFSSCINRSRSRAGCLDRH*QIYRPF
Trigger: AAAAGGCCGATATATCTGCCAATGTCTATCCAGACA...GCCTGCTCTGCTCCTAGAGCGGTTAATGCATGAGGAAAAGTGGACGGCATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433720.1
CDS-3UTR CCA 90 bp CACTCTTCCAGCAAACCAGACATACATAGGAGGCACAGCAAAAGACCCAAGGTGGTAACCTTTTTGAGGTaGATCATTAGGTACCGGAGG +
Preference number: 4 (lower is better)
Translates to: HSSSKPDIHRRHSKRPKVVTFLR*IIRYRR
Trigger: CCTCCGGTACCTAATGATCCACCTCAAAAAGGTTAC...CACCTTGGGTCTTTTGCTGTGCCTCCTATGTATGTCTGGTTTGCTGGAAGAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp ACACAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGCTGTGTCAACTTGGATaGTGCTGGGGCCATTCAGCT +
Preference number: 4 (lower is better)
Translates to: TQGAGEISLKSTEEDRGMLCQLG*CWGHSA
Trigger: AGCTGAATGGCCCCAGCACCATCCAAGTTGACACAG...CATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp GAGGGACAAGGTACACAGGGTAATAACCAATGCACTGCATTGAGTTCTATTTGCGTTCTCACGTGGAGGTaGCGCATGTCTATGAGACAC +
Preference number: 4 (lower is better)
Translates to: EGQGTQGNNQCTALSSICVLTWR*RMSMRH
Trigger: GTGTCTCATAGACATGCGCCACCTCCACGTGAGAAC...GCAAATAGAACTCAATGCAGTGCATTGGTTATTACCCTGTGTACCTTGTCCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp CCACGTAAAATAGTCATTCTCTTCTGCTCACTCCAAAGCAAGACTGGTGAGTTTACGGCCAGCAGTTCTTaGCGTTTCCTGCCCTGCTTA +
Preference number: 4 (lower is better)
Translates to: PRKIVILFCSLQSKTGEFTASSS*RFLPCL
Trigger: TAAGCAGGGCAGGAAACGCCAAGAACTGCTGGCCGT...AAACTCACCAGTCTTGCTTTGGAGTGAGCAGAAGAGAATGACTATTTTACGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp TTTCCTCATGCATTAACCGCTCTAGGAGCAGAGCAGGCTTTGTGCACGAGACATGCTTACTTTTTGAGGTaGATCATTAGGTACCGGAGG +
Preference number: 4 (lower is better)
Translates to: FPHALTALGAEQALCTRHAYFLR*IIRYRR
Trigger: CCTCCGGTACCTAATGATCCACCTCAAAAAGTAAGC...ATGTCTCGTGCACAAAGCCTGCTCTGCTCCTAGAGCGGTTAATGCATGAGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433720.1
CDS-3UTR TCA 90 bp CAGTACCCCACTCAGCGATCCTCTGCAGTCCAGGAAATTCTAGCACTTGCTTGGTTCAGCTCATTTCCCTaGTGGATTAGAATAAAACGT +
Preference number: 4 (lower is better)
Translates to: QYPTQRSSAVQEILALAWFSSFP*WIRIKR
Trigger: ACGTTTTATTCTAATCCATCAGGGAAATGAGCTGAA...CCAAGCAAGTGCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTGGGGTACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp AATGACCGCATTCTGTATCTTCTGGGATACACACTCATGATACGAAAAGACTATGCAAAAGACCCAAGGTaGGGGGCTTCCCTCACCTTC +
Preference number: 4 (lower is better)
Translates to: NDRILYLLGYTLMIRKDYAKDPR*GASLTF
Trigger: GAAGGTGAGGGAAGCCCCTCACCTTGGGTCTTTTGC...ATAGTCTTTTCGTATCATGAGTGTGTATCCCAGAAGATACAGAATGCGGTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp CCAATGGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAGATACGAAAAGACTATaGCCAATTCCAAAGCATACT +
Preference number: 4 (lower is better)
Translates to: PMESICIALGTVQVNSHTDTKRL*PIPKHT
Trigger: AGTATGCTTTGGAATTGGTCATAGTCTTTTCGTATC...TGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCCATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp AATGACCGCATTCTGTATCTTCTGGGATACACACTCATGATACGAAAAGACTATTATCCAGTCAGCCACTaGGGATTCAGGGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: NDRILYLLGYTLMIRKDYYPVSH*GFREAG
Trigger: CCCTGCCTCCCTGAATCCTCAGTGGCTGACTGGATA...ATAGTCTTTTCGTATCATGAGTGTGTATCCCAGAAGATACAGAATGCGGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412711.6
CDS-3UTR GCA 90 bp CACTCTTCCAGCAAACCAGACATACATAGGAGGCACAGCAAAAGACCCAAGGTGCTTCAATTTCCCGAATaGATATGTCTACCACCATGG +
Preference number: 4 (lower is better)
Translates to: HSSSKPDIHRRHSKRPKVLQFPE*ICLPPW
Trigger: CCATGGTGGTAGACATATGCATTCGGGAAATTGAAG...CACCTTGGGTCTTTTGCTGTGCCTCCTATGTATGTCTGGTTTGCTGGAAGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR GCA 90 bp CCAATGGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACACAGGGTAATAACCAATaGACTGCATTGAGTTCTATT +
Preference number: 4 (lower is better)
Translates to: PMESICIALGTVQVNSHTQGNNQ*TALSSI
Trigger: AATAGAACTCAATGCAGTGCATTGGTTATTACCCTG...TGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCCATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp CCACGTAAAATAGTCATTCTCTTCTGCTCACTCCAAAGCAAGACTGGTGAGTTTTGGCGTTTCCTGCCCTaGTTAGACTTCCGAACCACA +
Preference number: 4 (lower is better)
Translates to: PRKIVILFCSLQSKTGEFWRFLP*LDFRTT
Trigger: TGTGGTTCGGAAGTCTAAGCAGGGCAGGAAACGCCA...AAACTCACCAGTCTTGCTTTGGAGTGAGCAGAAGAGAATGACTATTTTACGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp TTCATGTGTGACGTTTGTTTTTCTTGGTTCATTTTTAGACCTGCTCAGCCTTCTCACCCTGGGGCTGCTTaGTTCTTCCAGCATGGGAAG +
Preference number: 4 (lower is better)
Translates to: FMCDVCFSWFIFRPAQPSHPGAA*FFQHGK
Trigger: CTTCCCATGCTGGAAGAAGCAAGCAGCCCCAGGGTG...AGAAGGCTGAGCAGGTCTAAAAATGAACCAAGAAAAACAAACGTCACACATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000474070.5
CDS-3UTR CCA 90 bp CACAAAATTTGTATGCATAGAAAGTGTGTGGACATTTCAGACCATCCTACAATTACAGGCTGGAGTTGCTaGACGCTGCCATCTCCGCGC +
Preference number: 4 (lower is better)
Translates to: HKICMHRKCVDISDHPTITGWSC*TLPSPR
Trigger: GCGCGGAGATGGCAGCGTCCAGCAACTCCAGCCTGT...AATTGTAGGATGGTCTGAAATGTCCACACACTTTCTATGCATACAAATTTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222792.11
CDS-3UTR CCA 90 bp ACACAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGCAGGTTGGCAGTCATTaGGAACGTGCTTGGAACACT +
Preference number: 4 (lower is better)
Translates to: TQGAGEISLKSTEEDRGMQVGSH*ERAWNT
Trigger: AGTGTTCCAAGCACGTTCCCAATGACTGCCAACCTG...CATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR CCA 90 bp CAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGTCACTCTTGAGATCAGGTTaGCAGTCATTGGGAACGTGC +
Preference number: 4 (lower is better)
Translates to: QGAGEISLKSTEEDRGMSLLRSG*QSLGTC
Trigger: GCACGTTCCCAATGACTGCCAACCTGATCTCAAGAG...TGACATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR CCA 90 bp CCTTGTTCTCACGTGGAGGTGGCGCATGTCTATGAGACACAGTACCCCACTCAGGATGATGTTTATGTCTaGATAGACATTGGCAGATAT +
Preference number: 4 (lower is better)
Translates to: PCSHVEVAHVYETQYPTQDDVYV*IDIGRY
Trigger: ATATCTGCCAATGTCTATCCAGACATAAACATCATC...CTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTGAGAACAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222792.11
ENST00000412711.6
CDS-3UTR CCA 90 bp CCACGTAAAATAGTCATTCTCTTCTGCTCACTCCAAAGCAAGACTGGTGAGTTTAGCATCAGCACTTCATaGACGGCTTCCAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: PRKIVILFCSLQSKTGEFSISTS*TASSLS
Trigger: TGAGAGGCTGGAAGCCGTCCATGAAGTGCTGATGCT...AAACTCACCAGTCTTGCTTTGGAGTGAGCAGAAGAGAATGACTATTTTACGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp GGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAATGATGTTAGTTGTCATTTTTaGAATGTACTCGGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: GVHLHSPWDCPGQQSHNDVSCHF*NVLGSF
Trigger: AAAGCTGCCGAGTACATTTCAAAAATGACAACTAAC...ATCATTGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222792.11
CDS-3UTR TCA 90 bp CACAAAATTTGTATGCATAGAAAGTGTGTGGACATTTCAGACCATCCTACAATTGTTCAATCCACAGTCTaGGCACCGGACCCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: HKICMHRKCVDISDHPTIVQSTV*APDPLG
Trigger: GCCCAAGGGGTCCGGTGCTCAGACTGTGGATTGAAC...AATTGTAGGATGGTCTGAAATGTCCACACACTTTCTATGCATACAAATTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR TCA 90 bp GGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAATGATTTCAGCTCATTTCCCTaGTGGATTAGAATAAAACGT +
Preference number: 4 (lower is better)
Translates to: GVHLHSPWDCPGQQSHNDFSSFP*WIRIKR
Trigger: ACGTTTTATTCTAATCCATCAGGGAAATGAGCTGAA...ATCATTGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp TTCATGTGTGACGTTTGTTTTTCTTGGTTCATTTTTAGACCTGCTCAGCCTTCTAGAAGCTCATCCGCCTaGTCCCGAGAGATGATCCCA +
Preference number: 4 (lower is better)
Translates to: FMCDVCFSWFIFRPAQPSRSSSA*SREMIP
Trigger: TGGGATCATCTCTCGGGAGCAGGCGGATGAGCTTCT...AGAAGGCTGAGCAGGTCTAAAAATGAACCAAGAAAAACAAACGTCACACATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474070.5
CDS-3UTR GCA 90 bp CCACGTAAAATAGTCATTCTCTTCTGCTCACTCCAAAGCAAGACTGGTGAGTTTCACTCAGCGATCCTCTaGAGTCCAGGAAATTCTAGC +
Preference number: 4 (lower is better)
Translates to: PRKIVILFCSLQSKTGEFHSAIL*SPGNSS
Trigger: GCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTG...AAACTCACCAGTCTTGCTTTGGAGTGAGCAGAAGAGAATGACTATTTTACGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp GGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAATGATCAGGGTAATAACCAATaGACTGCATTGAGTTCTATT +
Preference number: 4 (lower is better)
Translates to: GVHLHSPWDCPGQQSHNDQGNNQ*TALSSI
Trigger: AATAGAACTCAATGCAGTGCATTGGTTATTACCCTG...ATCATTGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp CACTCTTCCAGCAAACCAGACATACATAGGAGGCACAGCAAAAGACCCAAGGTGATAGTCATTCTCTTCTaGTCACTCCAAAGCAAGACT +
Preference number: 4 (lower is better)
Translates to: HSSSKPDIHRRHSKRPKVIVILF*SLQSKT
Trigger: AGTCTTGCTTTGGAGTGAGCAGAAGAGAATGACTAT...CACCTTGGGTCTTTTGCTGTGCCTCCTATGTATGTCTGGTTTGCTGGAAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp CAAGATAATACTGCATTTGTGGTCAGCTTTTTCAGGGTGTCACAGCAAAATGAGGGTCAAACCTCCCTGTaGCAATGGAGTCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: QDNTAFVVSFFRVSQQNEGQTSL*QWSPSA
Trigger: TGCAGATGGACTCCATTGGCACAGGGAGGTTTGACC...CTCATTTTGCTGTGACACCCTGAAAAAGCTGACCACAAATGCAGTATTATCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp CAGTACCCCACTCAGCGATCCTCTGCAGTCCAGGAAATTCTAGCACTTGCTTGGATACATGTGATGCTTTaGCTTCCATTTACACTATCA +
Preference number: 4 (lower is better)
Translates to: QYPTQRSSAVQEILALAWIHVML*LPFTLS
Trigger: TGATAGTGTAAATGGAAGGCAAAGCATCACATGTAT...CCAAGCAAGTGCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTGGGGTACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp CAGTACCCCACTCAGCGATCCTCTGCAGTCCAGGAAATTCTAGCACTTGCTTGGGATGATGTTTATGTCTaGATAGACATTGGCAGATAT +
Preference number: 4 (lower is better)
Translates to: QYPTQRSSAVQEILALAWDDVYV*IDIGRY
Trigger: ATATCTGCCAATGTCTATCCAGACATAAACATCATC...CCAAGCAAGTGCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTGGGGTACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222792.11
ENST00000412711.6
CDS-3UTR CCA 90 bp GCCGTCCACTTTTCCTCATGCATTAACCGCTCTAGGAGCAGAGCAGGCTTTGTGGATGATGTTTATGTCTaGATAGACATTGGCAGATAT +
Preference number: 4 (lower is better)
Translates to: AVHFSSCINRSRSRAGFVDDVYV*IDIGRY
Trigger: ATATCTGCCAATGTCTATCCAGACATAAACATCATC...CACAAAGCCTGCTCTGCTCCTAGAGCGGTTAATGCATGAGGAAAAGTGGACGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433720.1
CDS-3UTR CCA 90 bp CCACGTAAAATAGTCATTCTCTTCTGCTCACTCCAAAGCAAGACTGGTGAGTTTCAACTTGGATGGTGCTaGGGCCATTCAGCTCATTTC +
Preference number: 4 (lower is better)
Translates to: PRKIVILFCSLQSKTGEFQLGWC*GHSAHF
Trigger: GAAATGAGCTGAATGGCCCCAGCACCATCCAAGTTG...AAACTCACCAGTCTTGCTTTGGAGTGAGCAGAAGAGAATGACTATTTTACGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp CCACGTAAAATAGTCATTCTCTTCTGCTCACTCCAAAGCAAGACTGGTGAGTTTTTAGCTGTGTCAACTTaGATGGTGCTGGGGCCATTC +
Preference number: 4 (lower is better)
Translates to: PRKIVILFCSLQSKTGEFLAVST*MVLGPF
Trigger: GAATGGCCCCAGCACCATCCAAGTTGACACAGCTAA...AAACTCACCAGTCTTGCTTTGGAGTGAGCAGAAGAGAATGACTATTTTACGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp AATGACCGCATTCTGTATCTTCTGGGATACACACTCATGATACGAAAAGACTATACGGCCAGCAGTTCTTaGCGTTTCCTGCCCTGCTTA +
Preference number: 4 (lower is better)
Translates to: NDRILYLLGYTLMIRKDYTASSS*RFLPCL
Trigger: TAAGCAGGGCAGGAAACGCCAAGAACTGCTGGCCGT...ATAGTCTTTTCGTATCATGAGTGTGTATCCCAGAAGATACAGAATGCGGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp CAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGTCAAGAGAACATAGTGCCTaGATCCCAGCTCTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: QGAGEISLKSTEEDRGMSREHSA*IPALSS
Trigger: ACTGGAAAGAGCTGGGATCCAGGCACTATGTTCTCT...TGACATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412711.6
CDS-3UTR TCA 90 bp CACAAAATTTGTATGCATAGAAAGTGTGTGGACATTTCAGACCATCCTACAATTGGTTGTCGTTGTGTGTaGGGGCAGCCCTTCGAACCA +
Preference number: 4 (lower is better)
Translates to: HKICMHRKCVDISDHPTIGCRCV*GQPFEP
Trigger: TGGTTCGAAGGGCTGCCCTCACACACAACGACAACC...AATTGTAGGATGGTCTGAAATGTCCACACACTTTCTATGCATACAAATTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp CACTCTTCCAGCAAACCAGACATACATAGGAGGCACAGCAAAAGACCCAAGGTGGATACGAAAAGACTATaGCCAATTCCAAAGCATACT +
Preference number: 4 (lower is better)
Translates to: HSSSKPDIHRRHSKRPKVDTKRL*PIPKHT
Trigger: AGTATGCTTTGGAATTGGTCATAGTCTTTTCGTATC...CACCTTGGGTCTTTTGCTGTGCCTCCTATGTATGTCTGGTTTGCTGGAAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp ACACAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGCAGTCATTGGGAACGTaGTTGGAACACTGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: TQGAGEISLKSTEEDRGMQSLGT*LEHCLC
Trigger: ACACAAACAGTGTTCCAAGCACGTTCCCAATGACTG...CATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR GCA 90 bp CAAGATAATACTGCATTTGTGGTCAGCTTTTTCAGGGTGTCACAGCAAAATGAGCACTCAGCGATCCTCTaGAGTCCAGGAAATTCTAGC +
Preference number: 4 (lower is better)
Translates to: QDNTAFVVSFFRVSQQNEHSAIL*SPGNSS
Trigger: GCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTG...CTCATTTTGCTGTGACACCCTGAAAAAGCTGACCACAAATGCAGTATTATCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp TACATAAACTACAACAAACAAATCTGTACAGTTGGGAGGAGGGATAATAGCAGGGGTCAAACCTCCCTGTaGCAATGGAGTCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: YINYNKQICTVGRRDNSRGQTSL*QWSPSA
Trigger: TGCAGATGGACTCCATTGGCACAGGGAGGTTTGACC...CCTGCTATTATCCCTCCTCCCAACTGTACAGATTTGTTTGTTGTAGTTTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp CACTCTTCCAGCAAACCAGACATACATAGGAGGCACAGCAAAAGACCCAAGGTGATTGGAGATTTCTCTTaGTTCAATTTCCCGAATGCA +
Preference number: 4 (lower is better)
Translates to: HSSSKPDIHRRHSKRPKVIGDFS*FNFPNA
Trigger: TGCATTCGGGAAATTGAAGCAAGAGAAATCTCCAAT...CACCTTGGGTCTTTTGCTGTGCCTCCTATGTATGTCTGGTTTGCTGGAAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409041.7
CDS-3UTR CCA 90 bp ACACAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGCATTGGGAACGTGCTTaGAACACTGTTTGTGTACGT +
Preference number: 4 (lower is better)
Translates to: TQGAGEISLKSTEEDRGMHWERA*NTVCVR
Trigger: ACGTACACAAACAGTGTTCCAAGCACGTTCCCAATG...CATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR CCA 90 bp CAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGTCACATTGGGAACGTGCTTaGAACACTGTTTGTGTACGT +
Preference number: 4 (lower is better)
Translates to: QGAGEISLKSTEEDRGMSHWERA*NTVCVR
Trigger: ACGTACACAAACAGTGTTCCAAGCACGTTCCCAATG...TGACATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR CCA 90 bp ACACAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGATATGTCTACCACCATaGGTCTCTGAGTGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: TQGAGEISLKSTEEDRGMICLPP*VSECCE
Trigger: CTCACAACACTCAGAGACCCATGGTGGTAGACATAT...CATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR CCA 90 bp AATGACCGCATTCTGTATCTTCTGGGATACACACTCATGATACGAAAAGACTATAGCATCAGCACTTCATaGACGGCTTCCAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: NDRILYLLGYTLMIRKDYSISTS*TASSLS
Trigger: TGAGAGGCTGGAAGCCGTCCATGAAGTGCTGATGCT...ATAGTCTTTTCGTATCATGAGTGTGTATCCCAGAAGATACAGAATGCGGTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp ACACAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGGTAACCTTTTTGAGGTaGATCATTAGGTACCGGAGG +
Preference number: 4 (lower is better)
Translates to: TQGAGEISLKSTEEDRGMVTFLR*IIRYRR
Trigger: CCTCCGGTACCTAATGATCCACCTCAAAAAGGTTAC...CATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp CAAGATAATACTGCATTTGTGGTCAGCTTTTTCAGGGTGTCACAGCAAAATGAGCAACTTGGATGGTGCTaGGGCCATTCAGCTCATTTC +
Preference number: 4 (lower is better)
Translates to: QDNTAFVVSFFRVSQQNEQLGWC*GHSAHF
Trigger: GAAATGAGCTGAATGGCCCCAGCACCATCCAAGTTG...CTCATTTTGCTGTGACACCCTGAAAAAGCTGACCACAAATGCAGTATTATCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp TACATAAACTACAACAAACAAATCTGTACAGTTGGGAGGAGGGATAATAGCAGGCTGTGTCAACTTGGATaGTGCTGGGGCCATTCAGCT +
Preference number: 4 (lower is better)
Translates to: YINYNKQICTVGRRDNSRLCQLG*CWGHSA
Trigger: AGCTGAATGGCCCCAGCACCATCCAAGTTGACACAG...CCTGCTATTATCCCTCCTCCCAACTGTACAGATTTGTTTGTTGTAGTTTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp TACATAAACTACAACAAACAAATCTGTACAGTTGGGAGGAGGGATAATAGCAGGGTTCTCACGTGGAGGTaGCGCATGTCTATGAGACAC +
Preference number: 4 (lower is better)
Translates to: YINYNKQICTVGRRDNSRVLTWR*RMSMRH
Trigger: GTGTCTCATAGACATGCGCCACCTCCACGTGAGAAC...CCTGCTATTATCCCTCCTCCCAACTGTACAGATTTGTTTGTTGTAGTTTATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp TACATAAACTACAACAAACAAATCTGTACAGTTGGGAGGAGGGATAATAGCAGGACCCTTGTTCTCACGTaGAGGTGGCGCATGTCTATG +
Preference number: 4 (lower is better)
Translates to: YINYNKQICTVGRRDNSRTLVLT*RWRMSM
Trigger: CATAGACATGCGCCACCTCCACGTGAGAACAAGGGT...CCTGCTATTATCCCTCCTCCCAACTGTACAGATTTGTTTGTTGTAGTTTATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp CAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGTCAGTGTCTTCTCATAATTaGAGTGGTTGTCGTTGTGTG +
Preference number: 4 (lower is better)
Translates to: QGAGEISLKSTEEDRGMSVSSHN*SGCRCV
Trigger: CACACAACGACAACCACTTCAATTATGAGAAGACAC...TGACATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp CCACGTAAAATAGTCATTCTCTTCTGCTCACTCCAAAGCAAGACTGGTGAGTTTCCTTCACAAGTGTTGTaGGGTCACAACAGTACACTT +
Preference number: 4 (lower is better)
Translates to: PRKIVILFCSLQSKTGEFPSQVL*GHNSTL
Trigger: AAGTGTACTGTTGTGACCTCACAACACTTGTGAAGG...AAACTCACCAGTCTTGCTTTGGAGTGAGCAGAAGAGAATGACTATTTTACGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR TCA 90 bp CAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGTCACTTCAATGTGTTCAGTaGACCCAGAGACTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: QGAGEISLKSTEEDRGMSLQCVQ*TQRLCK
Trigger: TTTACAGAGTCTCTGGGTTCACTGAACACATTGAAG...TGACATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp CACAAAATTTGTATGCATAGAAAGTGTGTGGACATTTCAGACCATCCTACAATTGGTGGCGCATGTCTATaGGACACAGTACCCCACTCA +
Preference number: 4 (lower is better)
Translates to: HKICMHRKCVDISDHPTIGGACL*DTVPHS
Trigger: TGAGTGGGGTACTGTGTCTCATAGACATGCGCCACC...AATTGTAGGATGGTCTGAAATGTCCACACACTTTCTATGCATACAAATTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp CAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGTCATTCATTAAAAAGCACTaGGGAGGACAGAGGTATGTC +
Preference number: 4 (lower is better)
Translates to: QGAGEISLKSTEEDRGMSFIKKH*GGQRYV
Trigger: GACATACCTCTGTCCTCCTCAGTGCTTTTTAATGAA...TGACATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp CAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGTCATGGGATACACACTCATaGTACGAAAAGACTATGACC +
Preference number: 4 (lower is better)
Translates to: QGAGEISLKSTEEDRGMSWDTHS*YEKTMT
Trigger: GGTCATAGTCTTTTCGTATCATGAGTGTGTATCCCA...TGACATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp GAGGGACAAGGTACACAGGGTAATAACCAATGCACTGCATTGAGTTCTATTTGCCCAAAGCAAGACTGGTaGGTTTACACAAATCATCTC +
Preference number: 4 (lower is better)
Translates to: EGQGTQGNNQCTALSSICPKQDW*VYTNHL
Trigger: GAGATGATTTGTGTAAACTCACCAGTCTTGCTTTGG...GCAAATAGAACTCAATGCAGTGCATTGGTTATTACCCTGTGTACCTTGTCCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp TACATAAACTACAACAAACAAATCTGTACAGTTGGGAGGAGGGATAATAGCAGGCACTCAGCGATCCTCTaGAGTCCAGGAAATTCTAGC +
Preference number: 4 (lower is better)
Translates to: YINYNKQICTVGRRDNSRHSAIL*SPGNSS
Trigger: GCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTG...CCTGCTATTATCCCTCCTCCCAACTGTACAGATTTGTTTGTTGTAGTTTATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp TACATAAACTACAACAAACAAATCTGTACAGTTGGGAGGAGGGATAATAGCAGGCAGGTTGGCAGTCATTaGGAACGTGCTTGGAACACT +
Preference number: 4 (lower is better)
Translates to: YINYNKQICTVGRRDNSRQVGSH*ERAWNT
Trigger: AGTGTTCCAAGCACGTTCCCAATGACTGCCAACCTG...CCTGCTATTATCCCTCCTCCCAACTGTACAGATTTGTTTGTTGTAGTTTATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR CCA 90 bp TACATAAACTACAACAAACAAATCTGTACAGTTGGGAGGAGGGATAATAGCAGGCTCTTGAGATCAGGTTaGCAGTCATTGGGAACGTGC +
Preference number: 4 (lower is better)
Translates to: YINYNKQICTVGRRDNSRLLRSG*QSLGTC
Trigger: GCACGTTCCCAATGACTGCCAACCTGATCTCAAGAG...CCTGCTATTATCCCTCCTCCCAACTGTACAGATTTGTTTGTTGTAGTTTATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR CCA 90 bp CCACGTAAAATAGTCATTCTCTTCTGCTCACTCCAAAGCAAGACTGGTGAGTTTGTAACCTTTTTGAGGTaGATCATTAGGTACCGGAGG +
Preference number: 4 (lower is better)
Translates to: PRKIVILFCSLQSKTGEFVTFLR*IIRYRR
Trigger: CCTCCGGTACCTAATGATCCACCTCAAAAAGGTTAC...AAACTCACCAGTCTTGCTTTGGAGTGAGCAGAAGAGAATGACTATTTTACGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp TACATAAACTACAACAAACAAATCTGTACAGTTGGGAGGAGGGATAATAGCAGGTTAGCTGTGTCAACTTaGATGGTGCTGGGGCCATTC +
Preference number: 4 (lower is better)
Translates to: YINYNKQICTVGRRDNSRLAVST*MVLGPF
Trigger: GAATGGCCCCAGCACCATCCAAGTTGACACAGCTAA...CCTGCTATTATCCCTCCTCCCAACTGTACAGATTTGTTTGTTGTAGTTTATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp TCATGTGTGACGTTTGTTTTTCTTGGTTCATTTTTAGACCTGCTCAGCCTTCTGTTTAAGATTCCACCCTaGGGCTGCTTGCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SCVTFVFLGSFLDLLSLLFKIPP*GCLLLP
Trigger: TGGAAGAAGCAAGCAGCCCCAGGGTGGAATCTTAAA...CAGAAGGCTGAGCAGGTCTAAAAATGAACCAAGAAAAACAAACGTCACACATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474070.5
CDS-3UTR TCA 90 bp CACAAAATTTGTATGCATAGAAAGTGTGTGGACATTTCAGACCATCCTACAATTTCTGGTTTCCAAACCTaGGAGCCAGCGTGTAGCATC +
Preference number: 4 (lower is better)
Translates to: HKICMHRKCVDISDHPTISGFQT*EPACSI
Trigger: GATGCTACACGCTGGCTCTCAGGTTTGGAAACCAGA...AATTGTAGGATGGTCTGAAATGTCCACACACTTTCTATGCATACAAATTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222792.11
CDS-3UTR TCA 90 bp GAGGGACAAGGTACACAGGGTAATAACCAATGCACTGCATTGAGTTCTATTTGCAACACAAGGGGCAGGTaGAATTTCATTAAAAAGCAC +
Preference number: 4 (lower is better)
Translates to: EGQGTQGNNQCTALSSICNTRGR*NFIKKH
Trigger: GTGCTTTTTAATGAAATTTCACCTGCCCCTTGTGTT...GCAAATAGAACTCAATGCAGTGCATTGGTTATTACCCTGTGTACCTTGTCCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp CCACGTAAAATAGTCATTCTCTTCTGCTCACTCCAAAGCAAGACTGGTGAGTTTTGGGATACACACTCATaGTACGAAAAGACTATGACC +
Preference number: 4 (lower is better)
Translates to: PRKIVILFCSLQSKTGEFWDTHS*YEKTMT
Trigger: GGTCATAGTCTTTTCGTATCATGAGTGTGTATCCCA...AAACTCACCAGTCTTGCTTTGGAGTGAGCAGAAGAGAATGACTATTTTACGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp CAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGTCATTTGATATTAACAGATaGATTCAGAGGGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: QGAGEISLKSTEEDRGMSFDINR*IQRAWP
Trigger: TGGCCAAGCCCTCTGAATTCATCTGTTAATATCAAA...TGACATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp CAAGATAATACTGCATTTGTGGTCAGCTTTTTCAGGGTGTCACAGCAAAATGAGCAGTCATTGGGAACGTaGTTGGAACACTGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: QDNTAFVVSFFRVSQQNEQSLGT*LEHCLC
Trigger: ACACAAACAGTGTTCCAAGCACGTTCCCAATGACTG...CTCATTTTGCTGTGACACCCTGAAAAAGCTGACCACAAATGCAGTATTATCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR GCA 90 bp CCACGTAAAATAGTCATTCTCTTCTGCTCACTCCAAAGCAAGACTGGTGAGTTTCTTCAATTTCCCGAATaGATATGTCTACCACCATGG +
Preference number: 4 (lower is better)
Translates to: PRKIVILFCSLQSKTGEFLQFPE*ICLPPW
Trigger: CCATGGTGGTAGACATATGCATTCGGGAAATTGAAG...AAACTCACCAGTCTTGCTTTGGAGTGAGCAGAAGAGAATGACTATTTTACGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR GCA 90 bp CACAAAATTTGTATGCATAGAAAGTGTGTGGACATTTCAGACCATCCTACAATTGGTCAAACCTCCCTGTaGCAATGGAGTCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: HKICMHRKCVDISDHPTIGQTSL*QWSPSA
Trigger: TGCAGATGGACTCCATTGGCACAGGGAGGTTTGACC...AATTGTAGGATGGTCTGAAATGTCCACACACTTTCTATGCATACAAATTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp CAAGATAATACTGCATTTGTGGTCAGCTTTTTCAGGGTGTCACAGCAAAATGAGTTCCAGCCTCTCATCTaGATTGGAGATTTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: QDNTAFVVSFFRVSQQNEFQPLI*IGDFSC
Trigger: GCAAGAGAAATCTCCAATGCAGATGAGAGGCTGGAA...CTCATTTTGCTGTGACACCCTGAAAAAGCTGACCACAAATGCAGTATTATCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409041.7
CDS-3UTR CCA 90 bp CAAGATAATACTGCATTTGTGGTCAGCTTTTTCAGGGTGTCACAGCAAAATGAGTGCACAATCAGCTTTTaGTACCGCATATCATGCAGG +
Preference number: 4 (lower is better)
Translates to: QDNTAFVVSFFRVSQQNECTISF*YRISCR
Trigger: CCTGCATGATATGCGGTACCAAAAGCTGATTGTGCA...CTCATTTTGCTGTGACACCCTGAAAAAGCTGACCACAAATGCAGTATTATCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp CACAAAATTTGTATGCATAGAAAGTGTGTGGACATTTCAGACCATCCTACAATTCTGTGTCAACTTGGATaGTGCTGGGGCCATTCAGCT +
Preference number: 4 (lower is better)
Translates to: HKICMHRKCVDISDHPTILCQLG*CWGHSA
Trigger: AGCTGAATGGCCCCAGCACCATCCAAGTTGACACAG...AATTGTAGGATGGTCTGAAATGTCCACACACTTTCTATGCATACAAATTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp CAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGTCAGCCTCTTGCTGTAACTaGTATAAGTATGATTTCCAT +
Preference number: 4 (lower is better)
Translates to: QGAGEISLKSTEEDRGMSASCCN*YKYDFH
Trigger: ATGGAAATCATACTTATATCAGTTACAGCAAGAGGC...TGACATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222792.11
CDS-3UTR TCA 90 bp TGTGTGACGTTTGTTTTTCTTGGTTCATTTTTAGACCTGCTCAGCCTTCTGGATTGGATACTTTTTCTCTaGGTAGGGTGGCATATCCAA +
Preference number: 4 (lower is better)
Translates to: CVTFVFLGSFLDLLSLLDWILFL*VGWHIQ
Trigger: TTGGATATGCCACCCTACTCAGAGAAAAAGTATCCA...ATCCAGAAGGCTGAGCAGGTCTAAAAATGAACCAAGAAAAACAAACGTCACACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000474070.5
CDS-3UTR TCA 90 bp CAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGTCATGTCAAATGCCATTTTaGCATCTTCAATGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: QGAGEISLKSTEEDRGMSCQMPF*HLQCVQ
Trigger: CTGAACACATTGAAGATGTCAAAATGGCATTTGACA...TGACATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp ACACAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGTTCAGCTCATTTCCCTaGTGGATTAGAATAAAACGT +
Preference number: 4 (lower is better)
Translates to: TQGAGEISLKSTEEDRGMFSSFP*WIRIKR
Trigger: ACGTTTTATTCTAATCCATCAGGGAAATGAGCTGAA...CATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp ACACAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGGATACGAAAAGACTATaGCCAATTCCAAAGCATACT +
Preference number: 4 (lower is better)
Translates to: TQGAGEISLKSTEEDRGMDTKRL*PIPKHT
Trigger: AGTATGCTTTGGAATTGGTCATAGTCTTTTCGTATC...CATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp GAGGGACAAGGTACACAGGGTAATAACCAATGCACTGCATTGAGTTCTATTTGCATAGAAATCTTGGTGTaGAAGGCTCATGCTAAGATA +
Preference number: 4 (lower is better)
Translates to: EGQGTQGNNQCTALSSICIEILV*KAHAKI
Trigger: TATCTTAGCATGAGCCTTTCACACCAAGATTTCTAT...GCAAATAGAACTCAATGCAGTGCATTGGTTATTACCCTGTGTACCTTGTCCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp CAAGATAATACTGCATTTGTGGTCAGCTTTTTCAGGGTGTCACAGCAAAATGAGCCAAAGCAAGACTGGTaGGTTTACACAAATCATCTC +
Preference number: 4 (lower is better)
Translates to: QDNTAFVVSFFRVSQQNEPKQDW*VYTNHL
Trigger: GAGATGATTTGTGTAAACTCACCAGTCTTGCTTTGG...CTCATTTTGCTGTGACACCCTGAAAAAGCTGACCACAAATGCAGTATTATCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp AATGACCGCATTCTGTATCTTCTGGGATACACACTCATGATACGAAAAGACTATCATTGGGAACGTGCTTaGAACACTGTTTGTGTACGT +
Preference number: 4 (lower is better)
Translates to: NDRILYLLGYTLMIRKDYHWERA*NTVCVR
Trigger: ACGTACACAAACAGTGTTCCAAGCACGTTCCCAATG...ATAGTCTTTTCGTATCATGAGTGTGTATCCCAGAAGATACAGAATGCGGTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR CCA 90 bp CACAAAATTTGTATGCATAGAAAGTGTGTGGACATTTCAGACCATCCTACAATTCAGGTTGGCAGTCATTaGGAACGTGCTTGGAACACT +
Preference number: 4 (lower is better)
Translates to: HKICMHRKCVDISDHPTIQVGSH*ERAWNT
Trigger: AGTGTTCCAAGCACGTTCCCAATGACTGCCAACCTG...AATTGTAGGATGGTCTGAAATGTCCACACACTTTCTATGCATACAAATTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR CCA 90 bp AATGACCGCATTCTGTATCTTCTGGGATACACACTCATGATACGAAAAGACTATGTAACCTTTTTGAGGTaGATCATTAGGTACCGGAGG +
Preference number: 4 (lower is better)
Translates to: NDRILYLLGYTLMIRKDYVTFLR*IIRYRR
Trigger: CCTCCGGTACCTAATGATCCACCTCAAAAAGGTTAC...ATAGTCTTTTCGTATCATGAGTGTGTATCCCAGAAGATACAGAATGCGGTCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp CAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGTCAATAATACTGCATTTGTaGTCAGCTTTTTCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: QGAGEISLKSTEEDRGMSIILHL*SAFSGC
Trigger: ACACCCTGAAAAAGCTGACCACAAATGCAGTATTAT...TGACATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp ACACAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGATAATACTGCATTTGTaGTCAGCTTTTTCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: TQGAGEISLKSTEEDRGMIILHL*SAFSGC
Trigger: ACACCCTGAAAAAGCTGACCACAAATGCAGTATTAT...CATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp AATGACCGCATTCTGTATCTTCTGGGATACACACTCATGATACGAAAAGACTATGTGTCTTCTCATAATTaGAGTGGTTGTCGTTGTGTG +
Preference number: 4 (lower is better)
Translates to: NDRILYLLGYTLMIRKDYVSSHN*SGCRCV
Trigger: CACACAACGACAACCACTTCAATTATGAGAAGACAC...ATAGTCTTTTCGTATCATGAGTGTGTATCCCAGAAGATACAGAATGCGGTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp AATGACCGCATTCTGTATCTTCTGGGATACACACTCATGATACGAAAAGACTATCTTCAATGTGTTCAGTaGACCCAGAGACTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: NDRILYLLGYTLMIRKDYLQCVQ*TQRLCK
Trigger: TTTACAGAGTCTCTGGGTTCACTGAACACATTGAAG...ATAGTCTTTTCGTATCATGAGTGTGTATCCCAGAAGATACAGAATGCGGTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp AATGACCGCATTCTGTATCTTCTGGGATACACACTCATGATACGAAAAGACTATTTCATTAAAAAGCACTaGGGAGGACAGAGGTATGTC +
Preference number: 4 (lower is better)
Translates to: NDRILYLLGYTLMIRKDYFIKKH*GGQRYV
Trigger: GACATACCTCTGTCCTCCTCAGTGCTTTTTAATGAA...ATAGTCTTTTCGTATCATGAGTGTGTATCCCAGAAGATACAGAATGCGGTCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp CCACGTAAAATAGTCATTCTCTTCTGCTCACTCCAAAGCAAGACTGGTGAGTTTGATACGAAAAGACTATaGCCAATTCCAAAGCATACT +
Preference number: 4 (lower is better)
Translates to: PRKIVILFCSLQSKTGEFDTKRL*PIPKHT
Trigger: AGTATGCTTTGGAATTGGTCATAGTCTTTTCGTATC...AAACTCACCAGTCTTGCTTTGGAGTGAGCAGAAGAGAATGACTATTTTACGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp GAGGGACAAGGTACACAGGGTAATAACCAATGCACTGCATTGAGTTCTATTTGCGATCCCCAGATTTTCTaGATTCATGAAATTGTCTTT +
Preference number: 4 (lower is better)
Translates to: EGQGTQGNNQCTALSSICDPQIF*IHEIVF
Trigger: AAAGACAATTTCATGAATGCAGAAAATCTGGGGATC...GCAAATAGAACTCAATGCAGTGCATTGGTTATTACCCTGTGTACCTTGTCCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp CAAGATAATACTGCATTTGTGGTCAGCTTTTTCAGGGTGTCACAGCAAAATGAGTGCATAGAAAGTGTGTaGACATTTCAGACCATCCTA +
Preference number: 4 (lower is better)
Translates to: QDNTAFVVSFFRVSQQNECIESV*TFQTIL
Trigger: TAGGATGGTCTGAAATGTCCACACACTTTCTATGCA...CTCATTTTGCTGTGACACCCTGAAAAAGCTGACCACAAATGCAGTATTATCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp AATGACCGCATTCTGTATCTTCTGGGATACACACTCATGATACGAAAAGACTATGCCTCTCATCTGCATTaGAGATTTCTCTGTCAAATG +
Preference number: 4 (lower is better)
Translates to: NDRILYLLGYTLMIRKDYASHLH*RFLCQM
Trigger: CATTTGACAGAGAAATCTCCAATGCAGATGAGAGGC...ATAGTCTTTTCGTATCATGAGTGTGTATCCCAGAAGATACAGAATGCGGTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424025.4
CDS-3UTR TCA 90 bp CAAGATAATACTGCATTTGTGGTCAGCTTTTTCAGGGTGTCACAGCAAAATGAGTGTCAAATGCCATTTTaGCATCTTCAATGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: QDNTAFVVSFFRVSQQNECQMPF*HLQCVQ
Trigger: CTGAACACATTGAAGATGTCAAAATGGCATTTGACA...CTCATTTTGCTGTGACACCCTGAAAAAGCTGACCACAAATGCAGTATTATCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp TACATAAACTACAACAAACAAATCTGTACAGTTGGGAGGAGGGATAATAGCAGGAACACAAGGGGCAGGTaGAATTTCATTAAAAAGCAC +
Preference number: 4 (lower is better)
Translates to: YINYNKQICTVGRRDNSRNTRGR*NFIKKH
Trigger: GTGCTTTTTAATGAAATTTCACCTGCCCCTTGTGTT...CCTGCTATTATCCCTCCTCCCAACTGTACAGATTTGTTTGTTGTAGTTTATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp AATGACCGCATTCTGTATCTTCTGGGATACACACTCATGATACGAAAAGACTATTTTGATATTAACAGATaGATTCAGAGGGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: NDRILYLLGYTLMIRKDYFDINR*IQRAWP
Trigger: TGGCCAAGCCCTCTGAATTCATCTGTTAATATCAAA...ATAGTCTTTTCGTATCATGAGTGTGTATCCCAGAAGATACAGAATGCGGTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp CAAGATAATACTGCATTTGTGGTCAGCTTTTTCAGGGTGTCACAGCAAAATGAGCAGGGTAATAACCAATaGACTGCATTGAGTTCTATT +
Preference number: 4 (lower is better)
Translates to: QDNTAFVVSFFRVSQQNEQGNNQ*TALSSI
Trigger: AATAGAACTCAATGCAGTGCATTGGTTATTACCCTG...CTCATTTTGCTGTGACACCCTGAAAAAGCTGACCACAAATGCAGTATTATCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp CACAAAATTTGTATGCATAGAAAGTGTGTGGACATTTCAGACCATCCTACAATTTTCCAGCCTCTCATCTaGATTGGAGATTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: HKICMHRKCVDISDHPTIFQPLI*IGDFSV
Trigger: GACAGAGAAATCTCCAATGCAGATGAGAGGCTGGAA...AATTGTAGGATGGTCTGAAATGTCCACACACTTTCTATGCATACAAATTTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424025.4
CDS-3UTR CCA 90 bp AATGACCGCATTCTGTATCTTCTGGGATACACACTCATGATACGAAAAGACTATTGCATAGAAAGTGTGTaGACATTTCAGACCATCCTA +
Preference number: 4 (lower is better)
Translates to: NDRILYLLGYTLMIRKDYCIESV*TFQTIL
Trigger: TAGGATGGTCTGAAATGTCCACACACTTTCTATGCA...ATAGTCTTTTCGTATCATGAGTGTGTATCCCAGAAGATACAGAATGCGGTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp CACAAAATTTGTATGCATAGAAAGTGTGTGGACATTTCAGACCATCCTACAATTCCAAAGCAAGACTGGTaGGTTTACACAAATCATCTC +
Preference number: 4 (lower is better)
Translates to: HKICMHRKCVDISDHPTIPKQDW*VYTNHL
Trigger: GAGATGATTTGTGTAAACTCACCAGTCTTGCTTTGG...AATTGTAGGATGGTCTGAAATGTCCACACACTTTCTATGCATACAAATTTTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp CAAGATAATACTGCATTTGTGGTCAGCTTTTTCAGGGTGTCACAGCAAAATGAGATACATGTGATGCTTTaGCTTCCATTTACACTATCA +
Preference number: 4 (lower is better)
Translates to: QDNTAFVVSFFRVSQQNEIHVML*LPFTLS
Trigger: TGATAGTGTAAATGGAAGGCAAAGCATCACATGTAT...CTCATTTTGCTGTGACACCCTGAAAAAGCTGACCACAAATGCAGTATTATCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CCA 90 bp TACATAAACTACAACAAACAAATCTGTACAGTTGGGAGGAGGGATAATAGCAGGATAATACTGCATTTGTaGTCAGCTTTTTCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: YINYNKQICTVGRRDNSRIILHL*SAFSGC
Trigger: ACACCCTGAAAAAGCTGACCACAAATGCAGTATTAT...CCTGCTATTATCCCTCCTCCCAACTGTACAGATTTGTTTGTTGTAGTTTATGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp CACAAAATTTGTATGCATAGAAAGTGTGTGGACATTTCAGACCATCCTACAATTTTTGATATTAACAGATaGATTCAGAGGGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: HKICMHRKCVDISDHPTIFDINR*IQRAWP
Trigger: TGGCCAAGCCCTCTGAATTCATCTGTTAATATCAAA...AATTGTAGGATGGTCTGAAATGTCCACACACTTTCTATGCATACAAATTTTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp TACATAAACTACAACAAACAAATCTGTACAGTTGGGAGGAGGGATAATAGCAGGGATCCCCAGATTTTCTaGATTCATGAAATTGTCTTT +
Preference number: 4 (lower is better)
Translates to: YINYNKQICTVGRRDNSRDPQIF*IHEIVF
Trigger: AAAGACAATTTCATGAATGCAGAAAATCTGGGGATC...CCTGCTATTATCCCTCCTCCCAACTGTACAGATTTGTTTGTTGTAGTTTATGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp AATGACCGCATTCTGTATCTTCTGGGATACACACTCATGATACGAAAAGACTATGATCCCCAGATTTTCTaGATTCATGAAATTGTCTTT +
Preference number: 4 (lower is better)
Translates to: NDRILYLLGYTLMIRKDYDPQIF*IHEIVF
Trigger: AAAGACAATTTCATGAATGCAGAAAATCTGGGGATC...ATAGTCTTTTCGTATCATGAGTGTGTATCCCAGAAGATACAGAATGCGGTCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp TACATAAACTACAACAAACAAATCTGTACAGTTGGGAGGAGGGATAATAGCAGGATACATGTGATGCTTTaGCTTCCATTTACACTATCA +
Preference number: 4 (lower is better)
Translates to: YINYNKQICTVGRRDNSRIHVML*LPFTLS
Trigger: TGATAGTGTAAATGGAAGGCAAAGCATCACATGTAT...CCTGCTATTATCCCTCCTCCCAACTGTACAGATTTGTTTGTTGTAGTTTATGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR GCA 90 bp AATGACCGCATTCTGTATCTTCTGGGATACACACTCATGATACGAAAAGACTATATACATGTGATGCTTTaGCTTCCATTTACACTATCA +
Preference number: 4 (lower is better)
Translates to: NDRILYLLGYTLMIRKDYIHVML*LPFTLS
Trigger: TGATAGTGTAAATGGAAGGCAAAGCATCACATGTAT...ATAGTCTTTTCGTATCATGAGTGTGTATCCCAGAAGATACAGAATGCGGTCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR TCA 90 bp CACAAAATTTGTATGCATAGAAAGTGTGTGGACATTTCAGACCATCCTACAATTATAGAAATCTTGGTGTaGAAGGCTCATGCTAAGATA +
Preference number: 4 (lower is better)
Translates to: HKICMHRKCVDISDHPTIIEILV*KAHAKI
Trigger: TATCTTAGCATGAGCCTTTCACACCAAGATTTCTAT...AATTGTAGGATGGTCTGAAATGTCCACACACTTTCTATGCATACAAATTTTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS CCA 90 bp CCGGCCGCTCGCAGCCTCCGCGGCCCCCAGCCCATGGCAAAGTCCTaGGGACGCGCAGAAAGCACCAGCCTCCGGACTCTGCCTGCACTT +
Preference number: 5 (lower is better)
Translates to: PAARSLRGPQPMAKS*GRAESTSLRTLPAL
Trigger: AAGTGCAGGCAGAGTCCGGAGGCTGGTGCTTTCTGCGCGTCCCCAGGACTTTGCCATGGGCTGGGGGCCGCGGAGGCTGCGAGCGGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222792.11
CDS GCA 90 bp ATTCTTCAGCATCGGAGGACACCGACGAGCCGGACAGGCTGGAGTTaGTGGACGCTGCCATCTCCGCGCGCCCCTCGCGTCGCTGCTCGC +
Preference number: 5 (lower is better)
Translates to: ILQHRRTPTSRTGWS*WTLPSPRAPRVAAR
Trigger: GCGAGCAGCGACGCGAGGGGCGCGCGGAGATGGCAGCGTCCAGCAACTCCAGCCTGTCCGGCTCGTCGGTGTCCTCCGATGCTGAAGAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222792.11
CDS CCA 90 bp GCTGGTATTCTTCAGCATCGGAGGACACCGACGAGCCGGACAGGCTaGAGTTGCTGGACGCTGCCATCTCCGCGCGCCCCTCGCGTCGCT +
Preference number: 5 (lower is better)
Translates to: AGILQHRRTPTSRTG*SCWTLPSPRAPRVA
Trigger: AGCGACGCGAGGGGCGCGCGGAGATGGCAGCGTCCAGCAACTCCAGCCTGTCCGGCTCGTCGGTGTCCTCCGATGCTGAAGAATACCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222792.11
CDS CCA 90 bp TTTGCGGAGGAGCCTCCTGTGCAGCCTGAGCCAGGTTGGAGAGGATaGGACAGATGGCCTGGGCAAAGAGCCCTGGGGGCAGCCTTGCGG +
Preference number: 5 (lower is better)
Translates to: FAEEPPVQPEPGWRG*DRWPGQRALGAALR
Trigger: CCGCAAGGCTGCCCCCAGGGCTCTTTGCCCAGGCCATCTGTCCCATCCTCTCCAACCTGGCTCAGGCTGCACAGGAGGCTCCTCCGCAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491856.1
CDS TCA 90 bp CCACCCTGGGGCTGCTTGCTTCTTCCAGCATGGGAAGCGCTGACTTaGTGCGGCCAGGTTTCTGGGACCAGGAGGTTGGGACACGACGAC +
Preference number: 5 (lower is better)
Translates to: PPWGCLLLPAWEALT*CGQVSGTRRLGHDD
Trigger: GTCGTCGTGTCCCAACCTCCTGGTCCCAGAAACCTGGCCGCATCAAGTCAGCGCTTCCCATGCTGGAAGAAGCAAGCAGCCCCAGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439384.5
ENST00000461824.1
ENST00000474070.5
CDS GCA 90 bp GGAGGGACTGAGGCAGAGCCCAGTCTCAGGGGGTCTAACTGGCCCTaGATAGCAGGTGTGGATTGGAACCGGGAGGCCAGTTTATTGGGG +
Preference number: 5 (lower is better)
Translates to: GGTEAEPSLRGSNWP*IAGVDWNREASLLG
Trigger: CCCCAATAAACTGGCCTCCCGGTTCCAATCCACACCTGCTATGCAGGGCCAGTTAGACCCCCTGAGACTGGGCTCTGCCTCAGTCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491856.1
CDS CCA 90 bp CTGGTGGGAGGGACTGAGGCAGAGCCCAGTCTCAGGGGGTCTAACTaGCCCTGCATAGCAGGTGTGGATTGGAACCGGGAGGCCAGTTTA +
Preference number: 5 (lower is better)
Translates to: LVGGTEAEPSLRGSN*PCIAGVDWNREASL
Trigger: TAAACTGGCCTCCCGGTTCCAATCCACACCTGCTATGCAGGGCCAGTTAGACCCCCTGAGACTGGGCTCTGCCTCAGTCCCTCCCACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491856.1
CDS TCA 90 bp AGATTCCACCCTGGGGCTGCTTGCTTCTTCCAGCATGGGAAGCGCTaGCTTGATGCGGCCAGGTTTCTGGGACCAGGAGGTTGGGACACG +
Preference number: 5 (lower is better)
Translates to: RFHPGAACFFQHGKR*LDAARFLGPGGWDT
Trigger: CGTGTCCCAACCTCCTGGTCCCAGAAACCTGGCCGCATCAAGTCAGCGCTTCCCATGCTGGAAGAAGCAAGCAGCCCCAGGGTGGAATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439384.5
ENST00000461824.1
ENST00000474070.5
CDS-3UTR CAA 90 bp CCGCATATCATGCAGGGTGGTCAGGGTGCTGTCCTCAGGGGGCCTCATCAGAGTCAAAGAAAGCCGCCTTaGACACCCACCTTCACCCCG +
Preference number: 5 (lower is better)
Translates to: PHIMQGGQGAVLRGPHQSQRKPP*TPTFTP
Trigger: CGGGGTGAAGGTGGGTGTCAAAGGCGGCTTTCTTTG...ACTCTGATGAGGCCCCCTGAGGACAGCACCCTGACCACCCTGCATGATATGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439711.6
CDS CCA 90 bp GCTTCTTCCAGCATGGGAAGCGCTGACTTGATGCGGCCAGGTTTCTaGGACCAGGAGGTTGGGACACGACGACGCACTTTTTGCCCTGTG +
Preference number: 5 (lower is better)
Translates to: ASSSMGSADLMRPGF*DQEVGTRRRTFCPV
Trigger: CACAGGGCAAAAAGTGCGTCGTCGTGTCCCAACCTCCTGGTCCCAGAAACCTGGCCGCATCAAGTCAGCGCTTCCCATGCTGGAAGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439384.5
ENST00000461824.1
CDS-3UTR CAA 90 bp TTGGTACCGCATATCATGCAGGGTGGTCAGGGTGCTGTCCTCAGGGGGCCTCATTACGGCCAGCAGTTCTaGGCGTTTCCTGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: LVPHIMQGGQGAVLRGPHYGQQF*AFPALL
Trigger: AAGCAGGGCAGGAAACGCCAAGAACTGCTGGCCGTA...ATGAGGCCCCCTGAGGACAGCACCCTGACCACCCTGCATGATATGCGGTACCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439711.6
CDS CCA 90 bp CGGAACGTGTGGACCTTCACCCCGAAGGCTACGGCCAGCAGTTCTTaGCGTTTCCTGCCCTGCTTAGACTTCCGAACCACAGCACACTTT +
Preference number: 5 (lower is better)
Translates to: RNVWTFTPKATASSS*RFLPCLDFRTTAHF
Trigger: AAAGTGTGCTGTGGTTCGGAAGTCTAAGCAGGGCAGGAAACGCCAAGAACTGCTGGCCGTAGCCTTCGGGGTGAAGGTCCACACGTTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467441.5
CDS-3UTR CAA 90 bp CATATCATGCAGGGTGGTCAGGGTGCTGTCCTCAGGGGGCCTCATCAGAGTGGGTCAGGTTGGCAGTCATaGGGAACGTGCTTGGAACAC +
Preference number: 5 (lower is better)
Translates to: HIMQGGQGAVLRGPHQSGSGWQS*GTCLEH
Trigger: GTGTTCCAAGCACGTTCCCAATGACTGCCAACCTGA...CCCACTCTGATGAGGCCCCCTGAGGACAGCACCCTGACCACCCTGCATGATATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439711.6
CDS-3UTR CAA 90 bp CGCATATCATGCAGGGTGGTCAGGGTGCTGTCCTCAGGGGGCCTCATCAGAGTGCCTCTTGAGATCAGGTaGGCAGTCATTGGGAACGTG +
Preference number: 5 (lower is better)
Translates to: RISCRVVRVLSSGGLIRVPLEIR*AVIGNV
Trigger: CACGTTCCCAATGACTGCCAACCTGATCTCAAGAGG...CACTCTGATGAGGCCCCCTGAGGACAGCACCCTGACCACCCTGCATGATATGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439711.6
CDS-3UTR CAA 90 bp ATCATGCAGGGTGGTCAGGGTGCTGTCCTCAGGGGGCCTCATCAGAGTGGGCCCCTGCACAATCAGCTTTaGGTACCGCATATCATGCAG +
Preference number: 5 (lower is better)
Translates to: IMQGGQGAVLRGPHQSGPLHNQL*VPHIMQ
Trigger: CTGCATGATATGCGGTACCAAAAGCTGATTGTGCAG...GGGCCCACTCTGATGAGGCCCCCTGAGGACAGCACCCTGACCACCCTGCATGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439711.6
CDS-3UTR CAA 90 bp CCTTGTTCTCACGTGGAGGTGGCGCATGTCTATGAGACACAGTACCCCACTCAGCCCTCACCTTCACCCTaGTTCTCACGTGGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: PCSHVEVAHVYETQYPTQPSPSP*FSRGGG
Trigger: GCCACCTCCACGTGAGAACAAGGGTGAAGGTGAGGG...CTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTGAGAACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp CAGTACCCCACTCAGCGATCCTCTGCAGTCCAGGAAATTCTAGCACTTGCTTGGCCTGAAAGGCCCAGTTaGAGTGATGGAGGGGGCCCG +
Preference number: 5 (lower is better)
Translates to: QYPTQRSSAVQEILALAWPERPS*SDGGGP
Trigger: CGGGCCCCCTCCATCACTCAAACTGGGCCTTTCAGG...CCAAGCAAGTGCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTGGGGTACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412711.6
CDS-3UTR CAA 90 bp GAAGTGGTTGTCGTTGTGTGTGAGGGCAGCCCTTCGAACCAGGGAGGAGATCTTTCTGGGACCAGGAGGTaGGGACACGACGACGCACTT +
Preference number: 5 (lower is better)
Translates to: EVVVVVCEGSPSNQGGDLSGTRR*GHDDAL
Trigger: AAGTGCGTCGTCGTGTCCCAACCTCCTGGTCCCAGA...AAGATCTCCTCCCTGGTTCGAAGGGCTGCCCTCACACACAACGACAACCACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474070.5
CDS CCA 90 bp CCTTTGACACCCACCTTCACCCCGAAGGCTACGGCCAGCAGTTCTTaGCGTTTCCTGCCCTGCTTAGACTTCCGAACCACAGCACACTTT +
Preference number: 5 (lower is better)
Translates to: PLTPTFTPKATASSS*RFLPCLDFRTTAHF
Trigger: AAAGTGTGCTGTGGTTCGGAAGTCTAAGCAGGGCAGGAAACGCCAAGAACTGCTGGCCGTAGCCTTCGGGGTGAAGGTGGGTGTCAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409041.7
ENST00000412711.6
ENST00000421775.6
ENST00000424025.4
ENST00000439711.6
CDS CCA 90 bp CATCACATGGAGTCGTTTGATCCTGAGAGCCAGCGTGTAGCATCCTaGTTGCCGCTGGCTTTCTCTAAGGATGTAGGCACCCTCCACGCC +
Preference number: 5 (lower is better)
Translates to: HHMESFDPESQRVAS*LPLAFSKDVGTLHA
Trigger: GGCGTGGAGGGTGCCTACATCCTTAGAGAAAGCCAGCGGCAACCAGGATGCTACACGCTGGCTCTCAGGATCAAACGACTCCATGTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412536.5
CDS-3UTR CAA 90 bp GTCAGGGTGCTGTCCTCAGGGGGCCTCATCAGAGTGGGCCCAAACACGATCCCCACTTTCTTGATCCTCTaGAGATCAGGTTGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: VRVLSSGGLIRVGPNTIPTFLIL*RSGWQS
Trigger: TGACTGCCAACCTGATCTCAAGAGGATCAAGAAAGT...GGGGATCGTGTTTGGGCCCACTCTGATGAGGCCCCCTGAGGACAGCACCCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439711.6
CDS-3UTR CAA 90 bp CAGTACCCCACTCAGCGATCCTCTGCAGTCCAGGAAATTCTAGCACTTGCTTGGCCCTCACCTTCACCCTaGTTCTCACGTGGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: QYPTQRSSAVQEILALAWPSPSP*FSRGGG
Trigger: GCCACCTCCACGTGAGAACAAGGGTGAAGGTGAGGG...CCAAGCAAGTGCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTGGGGTACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp GTGGTTGTCGTTGTGTGTGAGGGCAGCCCTTCGAACCAGGGAGGAGATCTTTTCATGGGAAGCGCTGACTaGATGCGGCCAGGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: VVVVVCEGSPSNQGGDLFMGSAD*MRPGFW
Trigger: CCAGAAACCTGGCCGCATCAAGTCAGCGCTTCCCAT...GAAAAGATCTCCTCCCTGGTTCGAAGGGCTGCCCTCACACACAACGACAACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474070.5
CDS CCA 90 bp GAGGCTGGTATTCTTCAGCATATTTTGGAAGCTCTCTCGGGCTTCTaGGTTCAGAATAGACGGAGGACACCGACGAGCCGGACAGGCTGG +
Preference number: 5 (lower is better)
Translates to: EAGILQHILEALSGF*VQNRRRTPTSRTGW
Trigger: CCAGCCTGTCCGGCTCGTCGGTGTCCTCCGTCTATTCTGAACCCAGAAGCCCGAGAGAGCTTCCAAAATATGCTGAAGAATACCAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409350.5
CDS-3UTR CAA 90 bp GGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAATGATCCCTCACCTTCACCCTaGTTCTCACGTGGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: GVHLHSPWDCPGQQSHNDPSPSP*FSRGGG
Trigger: GCCACCTCCACGTGAGAACAAGGGTGAAGGTGAGGG...ATCATTGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp CCAATGGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACATACGGCCAGCAGTTCTaGGCGTTTCCTGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: PMESICIALGTVQVNSHTYGQQF*AFPALL
Trigger: AAGCAGGGCAGGAAACGCCAAGAACTGCTGGCCGTA...TGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCCATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS TCA 90 bp ATAATGGTACAGAACACATCAGGTGGCTCTGAGACTCCAGCGCAGTaGTTCAGGAGAGTGCTTGGCAGGACAGTGGCACTTGGTGCGAGC +
Preference number: 5 (lower is better)
Translates to: IMVQNTSGGSETPAQ*FRRVLGRTVALGAS
Trigger: GCTCGCACCAAGTGCCACTGTCCTGCCAAGCACTCTCCTGAATCACTGCGCTGGAGTCTCAGAGCCACCTGATGTGTTCTGTACCATTAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470261.1
CDS CCA 90 bp CATAGCAGGTGTGGATTGGAACCGGGAGGCCAGTTTATTGGGGCCTaGAGCAGAGGTGTTGGAGCTTTGATAGTGAGGTCACTGGACCTA +
Preference number: 5 (lower is better)
Translates to: HSRCGLEPGGQFIGA*SRGVGALIVRSLDL
Trigger: TAGGTCCAGTGACCTCACTATCAAAGCTCCAACACCTCTGCTCCAGGCCCCAATAAACTGGCCTCCCGGTTCCAATCCACACCTGCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491856.1
CDS CCA 90 bp AATGCTCTTCTGAGTGAGGATGAATGTTCTGTGAATCCCCGGTTCTaGTGGGAGGGACTGAGGCAGAGCCCAGTCTCAGGGGGTCTAACT +
Preference number: 5 (lower is better)
Translates to: NALLSEDECSVNPRF*WEGLRQSPVSGGLT
Trigger: AGTTAGACCCCCTGAGACTGGGCTCTGCCTCAGTCCCTCCCACCAGAACCGGGGATTCACAGAACATTCATCCTCACTCAGAAGAGCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491856.1
CDS-3UTR CAA 90 bp GCTTTTGGTACCGCATATCATGCAGGGTGGTCAGGGTGCTGTCCTCAGGGGGCCTGCTTGGAACACTGTTaGTGTACGTTCAATCCACAG +
Preference number: 5 (lower is better)
Translates to: AFGTAYHAGWSGCCPQGACLEHC*CTFNPQ
Trigger: CTGTGGATTGAACGTACACAAACAGTGTTCCAAGCA...GGCCCCCTGAGGACAGCACCCTGACCACCCTGCATGATATGCGGTACCAAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439711.6
CDS-3UTR CAA 90 bp CACGTGGAGGTGGCGCATGTCTATGAGACACAGTACCCCACTCAGCGATCCTCTTTTAGCTGTGTCAACTaGGATGGTGCTGGGGCCATT +
Preference number: 5 (lower is better)
Translates to: HVEVAHVYETQYPTQRSSFSCVN*DGAGAI
Trigger: AATGGCCCCAGCACCATCCAAGTTGACACAGCTAAA...AGAGGATCGCTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp CACTCTTCCAGCAAACCAGACATACATAGGAGGCACAGCAAAAGACCCAAGGTGCCCTCACCTTCACCCTaGTTCTCACGTGGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: HSSSKPDIHRRHSKRPKVPSPSP*FSRGGG
Trigger: GCCACCTCCACGTGAGAACAAGGGTGAAGGTGAGGG...CACCTTGGGTCTTTTGCTGTGCCTCCTATGTATGTCTGGTTTGCTGGAAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp GCCGTCCACTTTTCCTCATGCATTAACCGCTCTAGGAGCAGAGCAGGCTTTGTGGGAGCAGAGCAGGCTTaGTGCACGAGACATGAGCTT +
Preference number: 5 (lower is better)
Translates to: AVHFSSCINRSRSRAGFVGAEQA*CTRHEL
Trigger: AAGCTCATGTCTCGTGCACAAAGCCTGCTCTGCTCC...CACAAAGCCTGCTCTGCTCCTAGAGCGGTTAATGCATGAGGAAAAGTGGACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433720.1
CDS GCA 90 bp CATACACATGCATGTGGAAAATGTGGCATATCCGGGAGGGTTGTGTaGTGGCCCATGATCACTCTGATGTGGAGGCAGTTGTCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: HTHACGKCGISGRVV*WPMITLMWRQLSEA
Trigger: GGCCTCAGACAACTGCCTCCACATCAGAGTGATCATGGGCCAGCACACAACCCTCCCGGATATGCCACATTTTCCACATGCATGTGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491856.1
CDS-3UTR CAA 90 bp CCAATGGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACATCAGGTTGGCAGTCATaGGGAACGTGCTTGGAACAC +
Preference number: 5 (lower is better)
Translates to: PMESICIALGTVQVNSHTSGWQS*GTCLEH
Trigger: GTGTTCCAAGCACGTTCCCAATGACTGCCAACCTGA...TGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCCATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR CAA 90 bp CATATCATGCAGGGTGGTCAGGGTGCTGTCCTCAGGGGGCCTCATCAGAGTGGGCCGATTTTAATCCTCTaGCTTCAATTTCCCGAATGC +
Preference number: 5 (lower is better)
Translates to: HIMQGGQGAVLRGPHQSGPILIL*LQFPEC
Trigger: GCATTCGGGAAATTGAAGCAAGAGGATTAAAATCGG...CCCACTCTGATGAGGCCCCCTGAGGACAGCACCCTGACCACCCTGCATGATATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439711.6
CDS-3UTR CAA 90 bp CACTCTTCCAGCAAACCAGACATACATAGGAGGCACAGCAAAAGACCCAAGGTGCAAAGAAAGCCGCCTTaGACACCCACCTTCACCCCG +
Preference number: 5 (lower is better)
Translates to: HSSSKPDIHRRHSKRPKVQRKPP*TPTFTP
Trigger: CGGGGTGAAGGTGGGTGTCAAAGGCGGCTTTCTTTG...CACCTTGGGTCTTTTGCTGTGCCTCCTATGTATGTCTGGTTTGCTGGAAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp GGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAATGATCCAGCTCTTTCCAGTTaGCTCTGCAGAGCCCAGGAA +
Preference number: 5 (lower is better)
Translates to: GVHLHSPWDCPGQQSHNDPALSS*LCRAQE
Trigger: TTCCTGGGCTCTGCAGAGCAAACTGGAAAGAGCTGG...ATCATTGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412711.6
CDS TCA 90 bp ACGCCTCCAAGAAGCTCATCCGCCTGCTCCCGAGAGATGATCCCATaGAACCTGAAGGTACAAGACCATCAATGCTCTGAACAGACCACA +
Preference number: 5 (lower is better)
Translates to: TPPRSSSACSREMIP*NLKVQDHQCSEQTT
Trigger: TGTGGTCTGTTCAGAGCATTGATGGTCTTGTACCTTCAGGTTTCATGGGATCATCTCTCGGGAGCAGGCGGATGAGCTTCTTGGAGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491856.1
CDS GCA 90 bp GTGATGGAGGGGGCCCGGCTTCTGAATAAGGATGGGCCTGTTTTGTaGTATTTCTTAAGGCCGACGTGCGCCTGGAACAATAGCAAACAT +
Preference number: 5 (lower is better)
Translates to: VMEGARLLNKDGPVL*YFLRPTCAWNNSKH
Trigger: ATGTTTGCTATTGTTCCAGGCGCACGTCGGCCTTAAGAAATAGCACAAAACAGGCCCATCCTTATTCAGAAGCCGGGCCCCCTCCATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412711.6
CDS CCA 90 bp GCCAAGATCGAGCCGTCGTCTATTTTGGAAGCTCTCTCGGGCTTCTaGGTTCAGAATAGACTGAAGAGAGGCAAGAGTGGAAACAGCCAG +
Preference number: 5 (lower is better)
Translates to: AKIEPSSILEALSGF*VQNRLKRGKSGNSQ
Trigger: CTGGCTGTTTCCACTCTTGCCTCTCTTCAGTCTATTCTGAACCCAGAAGCCCGAGAGAGCTTCCAAAATAGACGACGGCTCGATCTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409964.6
CDS-3UTR CAA 90 bp GGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAATGATTCAGGTTGGCAGTCATaGGGAACGTGCTTGGAACAC +
Preference number: 5 (lower is better)
Translates to: GVHLHSPWDCPGQQSHNDSGWQS*GTCLEH
Trigger: GTGTTCCAAGCACGTTCCCAATGACTGCCAACCTGA...ATCATTGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR CAA 90 bp GGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAATGATCCTCTTGAGATCAGGTaGGCAGTCATTGGGAACGTG +
Preference number: 5 (lower is better)
Translates to: GVHLHSPWDCPGQQSHNDPLEIR*AVIGNV
Trigger: CACGTTCCCAATGACTGCCAACCTGATCTCAAGAGG...ATCATTGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR CAA 90 bp AGCTTTTGGTACCGCATATCATGCAGGGTGGTCAGGGTGCTGTCCTCAGGGGGCCAACAGTACACTTTCTaGATCCTCTTGAGATCAGGT +
Preference number: 5 (lower is better)
Translates to: SFWYRISCRVVRVLSSGGQQYTF*ILLRSG
Trigger: ACCTGATCTCAAGAGGATCAAGAAAGTGTACTGTTG...GCCCCCTGAGGACAGCACCCTGACCACCCTGCATGATATGCGGTACCAAAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439711.6
CDS CCA 90 bp GTTCTTGCTCCCGTACTGTCTGGCTCGATGCCCAGCACCTGGTGGTaGCTAATAATATACACTCAGGTCACTTACAAGCAATGTGACCCT +
Preference number: 5 (lower is better)
Translates to: VLAPVLSGSMPSTWW*LIIYTQVTYKQCDP
Trigger: AGGGTCACATTGCTTGTAAGTGACCTGAGTGTATATTATTAGCCACCACCAGGTGCTGGGCATCGAGCCAGACAGTACGGGAGCAAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470261.1
CDS-3UTR CAA 90 bp TCGAACCAGGGAGGAGATCTTTTCCACCGCTGTGTGTTCTTCATGTGTGACGTTGGACAAATGATTCTCTaGGGACGAGGTGCCTCTTGC +
Preference number: 5 (lower is better)
Translates to: SNQGGDLFHRCVFFMCDVGQMIL*GRGASC
Trigger: GCAAGAGGCACCTCGTCCCAAGAGAATCATTTGTCC...AACGTCACACATGAAGAACACACAGCGGTGGAAAAGATCTCCTCCCTGGTTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474070.5
CDS-3UTR CAA 90 bp CAGTACCCCACTCAGCGATCCTCTGCAGTCCAGGAAATTCTAGCACTTGCTTGGTCATTGGGAACGTGCTaGGAACACTGTTTGTGTACG +
Preference number: 5 (lower is better)
Translates to: QYPTQRSSAVQEILALAWSLGTC*EHCLCT
Trigger: CGTACACAAACAGTGTTCCAAGCACGTTCCCAATGA...CCAAGCAAGTGCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTGGGGTACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR CAA 90 bp CACAATCAGCTTTTGGTACCGCATATCATGCAGGGTGGTCAGGGTGCTGTCCTCTCATTGGGAACGTGCTaGGAACACTGTTTGTGTACG +
Preference number: 5 (lower is better)
Translates to: HNQLLVPHIMQGGQGAVLSLGTC*EHCLCT
Trigger: CGTACACAAACAGTGTTCCAAGCACGTTCCCAATGA...GAGGACAGCACCCTGACCACCCTGCATGATATGCGGTACCAAAAGCTGATTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439711.6
CDS-3UTR CAA 90 bp CACTCTTCCAGCAAACCAGACATACATAGGAGGCACAGCAAAAGACCCAAGGTGCCTCTTGAGATCAGGTaGGCAGTCATTGGGAACGTG +
Preference number: 5 (lower is better)
Translates to: HSSSKPDIHRRHSKRPKVPLEIR*AVIGNV
Trigger: CACGTTCCCAATGACTGCCAACCTGATCTCAAGAGG...CACCTTGGGTCTTTTGCTGTGCCTCCTATGTATGTCTGGTTTGCTGGAAGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR CAA 90 bp CAGTACCCCACTCAGCGATCCTCTGCAGTCCAGGAAATTCTAGCACTTGCTTGGCTGCACAATCAGCTTTaGGTACCGCATATCATGCAG +
Preference number: 5 (lower is better)
Translates to: QYPTQRSSAVQEILALAWLHNQL*VPHIMQ
Trigger: CTGCATGATATGCGGTACCAAAAGCTGATTGTGCAG...CCAAGCAAGTGCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTGGGGTACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS TCA 90 bp GCCCCTCTTGTGCTTCCTGTCTCATTTCCTCCTCCCGAGGACAAATaGTTCTCTTGGGACGAGGTGCCTCTTGCTGTAACTGATATAAGT +
Preference number: 5 (lower is better)
Translates to: APLVLPVSFPPPEDK*FSWDEVPLAVTDIS
Trigger: ACTTATATCAGTTACAGCAAGAGGCACCTCGTCCCAAGAGAATCATTTGTCCTCGGGAGGAGGAAATGAGACAGGAAGCACAAGAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482820.6
CDS-3UTR CAA 90 bp CAGTACCCCACTCAGCGATCCTCTGCAGTCCAGGAAATTCTAGCACTTGCTTGGTGCTTGGAACACTGTTaGTGTACGTTCAATCCACAG +
Preference number: 5 (lower is better)
Translates to: QYPTQRSSAVQEILALAWCLEHC*CTFNPQ
Trigger: CTGTGGATTGAACGTACACAAACAGTGTTCCAAGCA...CCAAGCAAGTGCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTGGGGTACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR CAA 90 bp CCTTGTTCTCACGTGGAGGTGGCGCATGTCTATGAGACACAGTACCCCACTCAGCCGATTTTAATCCTCTaGCTTCAATTTCCCGAATGC +
Preference number: 5 (lower is better)
Translates to: PCSHVEVAHVYETQYPTQPILIL*LQFPEC
Trigger: GCATTCGGGAAATTGAAGCAAGAGGATTAAAATCGG...CTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTGAGAACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222792.11
ENST00000412711.6
CDS-3UTR CAA 90 bp GGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAATGATCTGCACAATCAGCTTTaGGTACCGCATATCATGCAG +
Preference number: 5 (lower is better)
Translates to: GVHLHSPWDCPGQQSHNDLHNQL*VPHIMQ
Trigger: CTGCATGATATGCGGTACCAAAAGCTGATTGTGCAG...ATCATTGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp CACTCTTCCAGCAAACCAGACATACATAGGAGGCACAGCAAAAGACCCAAGGTGATGAATTCAGAGGGCTaGGCCAGGAAGAAAAGAGGG +
Preference number: 5 (lower is better)
Translates to: HSSSKPDIHRRHSKRPKVMNSEG*ARKKRG
Trigger: CCCTCTTTTCTTCCTGGCCAAGCCCTCTGAATTCAT...CACCTTGGGTCTTTTGCTGTGCCTCCTATGTATGTCTGGTTTGCTGGAAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp GAGGGACAAGGTACACAGGGTAATAACCAATGCACTGCATTGAGTTCTATTTGCCAAAGAAAGCCGCCTTaGACACCCACCTTCACCCCG +
Preference number: 5 (lower is better)
Translates to: EGQGTQGNNQCTALSSICQRKPP*TPTFTP
Trigger: CGGGGTGAAGGTGGGTGTCAAAGGCGGCTTTCTTTG...GCAAATAGAACTCAATGCAGTGCATTGGTTATTACCCTGTGTACCTTGTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp CAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGTCACAAAGAAAGCCGCCTTaGACACCCACCTTCACCCCG +
Preference number: 5 (lower is better)
Translates to: QGAGEISLKSTEEDRGMSQRKPP*TPTFTP
Trigger: CGGGGTGAAGGTGGGTGTCAAAGGCGGCTTTCTTTG...TGACATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp GAGGGACAAGGTACACAGGGTAATAACCAATGCACTGCATTGAGTTCTATTTGCTCCTGCCGCAGCACATaGCAAAGGAGAGGTCTCTCC +
Preference number: 5 (lower is better)
Translates to: EGQGTQGNNQCTALSSICSCRST*QRRGLS
Trigger: GGAGAGACCTCTCCTTTGCAATGTGCTGCGGCAGGA...GCAAATAGAACTCAATGCAGTGCATTGGTTATTACCCTGTGTACCTTGTCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412711.6
CDS TCA 90 bp AAGTTTCCTTTTGTGATTTTCTTCCTCCGGCATCCCAGGGCTAGTTaGGTTGGCACGATGAAGCGTGTCCACACACAGCCAAATGCTCAA +
Preference number: 5 (lower is better)
Translates to: KFPFVIFFLRHPRAS*VGTMKRVHTQPNAQ
Trigger: TTGAGCATTTGGCTGTGTGTGGACACGCTTCATCGTGCCAACTCAACTAGCCCTGGGATGCCGGAGGAAGAAAATCACAAAAGGAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409922.5
CDS TCA 90 bp TGCATTAACCGCTCTAGGAGCAGAGCAGGCTTTGTGCACGAGACATaGGCTTACTTTTTGAGGTGGATCATTAGGTACCGGAGGGTTTCA +
Preference number: 5 (lower is better)
Translates to: CINRSRSRAGFVHET*AYFLRWIIRYRRVS
Trigger: TGAAACCCTCCGGTACCTAATGATCCACCTCAAAAAGTAAGCTCATGTCTCGTGCACAAAGCCTGCTCTGCTCCTAGAGCGGTTAATGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433720.1
CDS GCA 90 bp CTGAATAAGGATGGGCCTGTTTTGTGCTATTTCTTAAGGCCGACGTaGGCCTGGAACAATAGCAAACATTCATGTGCACAGCAACCCCCA +
Preference number: 5 (lower is better)
Translates to: LNKDGPVLCYFLRPT*AWNNSKHSCAQQPP
Trigger: TGGGGGTTGCTGTGCACATGAATGTTTGCTATTGTTCCAGGCGCACGTCGGCCTTAAGAAATAGCACAAAACAGGCCCATCCTTATTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412711.6
CDS GCA 90 bp CTCTCCTCAGCACCAAAGCAGAGCCGAATGCTTGTACACACCAGGTaGTCAATAAATGTTTGTTTGCTCAACCCACTGGGTGACCACTAT +
Preference number: 5 (lower is better)
Translates to: LSSAPKQSRMLVHTR*SINVCLLNPLGDHY
Trigger: ATAGTGGTCACCCAGTGGGTTGAGCAAACAAACATTTATTGAGCACCTGGTGTGTACAAGCATTCGGCTCTGCTTTGGTGCTGAGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483081.1
CDS GCA 90 bp ATAGTTAACCCGCCTGTTGATGCGGCATGGATTAAAACGAAAGGCTaGTTCCATCACACACAGCTCACCTTTTCCACCGCTGTGTGTTCT +
Preference number: 5 (lower is better)
Translates to: IVNPPVDAAWIKTKG*FHHTQLTFSTAVCS
Trigger: AGAACACACAGCGGTGGAAAAGGTGAGCTGTGTGTGATGGAAGCAGCCTTTCGTTTTAATCCATGCCGCATCAACAGGCGGGTTAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491856.1
CDS CCA 90 bp TTAGTTCTTGCTCCCGTACTGTCTGGCTCGATGCCCAGCACCTGGTaGTGGCTAATAATATACACTCAGGTCACTTACAAGCAATGTGAC +
Preference number: 5 (lower is better)
Translates to: LVLAPVLSGSMPSTW*WLIIYTQVTYKQCD
Trigger: GTCACATTGCTTGTAAGTGACCTGAGTGTATATTATTAGCCACCACCAGGTGCTGGGCATCGAGCCAGACAGTACGGGAGCAAGAACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470261.1
CDS-3UTR CAA 90 bp CACTCTTCCAGCAAACCAGACATACATAGGAGGCACAGCAAAAGACCCAAGGTGTCATTGGGAACGTGCTaGGAACACTGTTTGTGTACG +
Preference number: 5 (lower is better)
Translates to: HSSSKPDIHRRHSKRPKVSLGTC*EHCLCT
Trigger: CGTACACAAACAGTGTTCCAAGCACGTTCCCAATGA...CACCTTGGGTCTTTTGCTGTGCCTCCTATGTATGTCTGGTTTGCTGGAAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR CAA 90 bp CCAATGGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACACAACAGTACACTTTCTaGATCCTCTTGAGATCAGGT +
Preference number: 5 (lower is better)
Translates to: PMESICIALGTVQVNSHTQQYTF*ILLRSG
Trigger: ACCTGATCTCAAGAGGATCAAGAAAGTGTACTGTTG...TGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCCATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR CAA 90 bp CACTCTTCCAGCAAACCAGACATACATAGGAGGCACAGCAAAAGACCCAAGGTGCTGCACAATCAGCTTTaGGTACCGCATATCATGCAG +
Preference number: 5 (lower is better)
Translates to: HSSSKPDIHRRHSKRPKVLHNQL*VPHIMQ
Trigger: CTGCATGATATGCGGTACCAAAAGCTGATTGTGCAG...CACCTTGGGTCTTTTGCTGTGCCTCCTATGTATGTCTGGTTTGCTGGAAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp CACGTGGAGGTGGCGCATGTCTATGAGACACAGTACCCCACTCAGCGATCCTCTAATTCTAGCACTTGCTaGGAAAACAAATCAAGTGGT +
Preference number: 5 (lower is better)
Translates to: HVEVAHVYETQYPTQRSSNSSTC*ENKSSG
Trigger: ACCACTTGATTTGTTTTCCAAGCAAGTGCTAGAATT...AGAGGATCGCTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp CCTTGTTCTCACGTGGAGGTGGCGCATGTCTATGAGACACAGTACCCCACTCAGAAGATAATACTGCATTaGTGGTCAGCTTTTTCAGGG +
Preference number: 5 (lower is better)
Translates to: PCSHVEVAHVYETQYPTQKIILH*WSAFSG
Trigger: CCCTGAAAAAGCTGACCACAAATGCAGTATTATCTT...CTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTGAGAACAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp CACGTGGAGGTGGCGCATGTCTATGAGACACAGTACCCCACTCAGCGATCCTCTAATACATGTGATGCTTaGCCTTCCATTTACACTATC +
Preference number: 5 (lower is better)
Translates to: HVEVAHVYETQYPTQRSSNTCDA*PSIYTI
Trigger: GATAGTGTAAATGGAAGGCAAAGCATCACATGTATT...AGAGGATCGCTGAGTGGGGTACTGTGTCTCATAGACATGCGCCACCTCCACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS TCA 90 bp TGTCTGCACAGCCATTGGTACTGCTTTTACAGTGCACAGTGCAACTaGGGCAAACCATCTCCACTGTTCACAATGTTGACAGGACTAGTC +
Preference number: 5 (lower is better)
Translates to: CLHSHWYCFYSAQCN*GKPSPLFTMLTGLV
Trigger: GACTAGTCCTGTCAACATTGTGAACAGTGGAGATGGTTTGCCTCAGTTGCACTGTGCACTGTAAAAGCAGTACCAATGGCTGTGCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483081.1
CDS GCA 90 bp TCAGGAACCAGCCCACGTTCCCTGTTGCCTTTAAGTAAATACAGCTaGTCCTCCCACAGGACTGGAGATTTGATCAACCAGTATTTCATG +
Preference number: 5 (lower is better)
Translates to: SGTSPRSLLPLSKYS*SSHRTGDLINQYFM
Trigger: CATGAAATACTGGTTGATCAAATCTCCAGTCCTGTGGGAGGAGCAGCTGTATTTACTTAAAGGCAACAGGGAACGTGGGCTGGTTCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491856.1
CDS CCA 90 bp ACTCACTGGATTAGAAGCCCAGCCATTGATATGAACTATCTGGGTTaGAATCTGGCCTTTGCCCCTCTTGTGCTTCCTGTCTCATTTCCT +
Preference number: 5 (lower is better)
Translates to: THWIRSPAIDMNYLG*NLAFAPLVLPVSFP
Trigger: AGGAAATGAGACAGGAAGCACAAGAGGGGCAAAGGCCAGATTCCAACCCAGATAGTTCATATCAATGGCTGGGCTTCTAATCCAGTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482820.6
CDS-3UTR CAA 90 bp CCAATGGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACATGTACTCGGCAGCTTTaGTTTCTATGTACAGTGTTA +
Preference number: 5 (lower is better)
Translates to: PMESICIALGTVQVNSHTCTRQL*FLCTVL
Trigger: TAACACTGTACATAGAAACAAAAGCTGCCGAGTACA...TGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCCATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222792.11
CDS-3UTR CAA 90 bp CAGTACCCCACTCAGCGATCCTCTGCAGTCCAGGAAATTCTAGCACTTGCTTGGAAGATAATACTGCATTaGTGGTCAGCTTTTTCAGGG +
Preference number: 5 (lower is better)
Translates to: QYPTQRSSAVQEILALAWKIILH*WSAFSG
Trigger: CCCTGAAAAAGCTGACCACAAATGCAGTATTATCTT...CCAAGCAAGTGCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTGGGGTACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp CAGTACCCCACTCAGCGATCCTCTGCAGTCCAGGAAATTCTAGCACTTGCTTGGCACACAGAGCTACTTTaGTCAAGGAGGAACAAATAT +
Preference number: 5 (lower is better)
Translates to: QYPTQRSSAVQEILALAWHTELL*SRRNKY
Trigger: ATATTTGTTCCTCCTTGACAAAAGTAGCTCTGTGTG...CCAAGCAAGTGCTAGAATTTCCTGGACTGCAGAGGATCGCTGAGTGGGGTACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS CCA 90 bp TTTTTAGTTCTTGCTCCCGTACTGTCTGGCTCGATGCCCAGCACCTaGTGGTGGCTAATAATATACACTCAGGTCACTTACAAGCAATGT +
Preference number: 5 (lower is better)
Translates to: FLVLAPVLSGSMPST*WWLIIYTQVTYKQC
Trigger: ACATTGCTTGTAAGTGACCTGAGTGTATATTATTAGCCACCACCAGGTGCTGGGCATCGAGCCAGACAGTACGGGAGCAAGAACTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470261.1
CDS CCA 90 bp TTTCAGCAAATCGCACCTATAGTTAACCCGCCTGTTGATGCGGCATaGATTAAAACGAAAGGCTGCTTCCATCACACACAGCTCACCTTT +
Preference number: 5 (lower is better)
Translates to: FQQIAPIVNPPVDAA*IKTKGCFHHTQLTF
Trigger: AAAGGTGAGCTGTGTGTGATGGAAGCAGCCTTTCGTTTTAATCCATGCCGCATCAACAGGCGGGTTAACTATAGGTGCGATTTGCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491856.1
CDS CCA 90 bp AATTTCTGTTCCCAGCTGATGCTGGGATCACACTCCGTGACTCACTaGATTAGAAGCCCAGCCATTGATATGAACTATCTGGGTTGGAAT +
Preference number: 5 (lower is better)
Translates to: NFCSQLMLGSHSVTH*IRSPAIDMNYLGWN
Trigger: ATTCCAACCCAGATAGTTCATATCAATGGCTGGGCTTCTAATCCAGTGAGTCACGGAGTGTGATCCCAGCATCAGCTGGGAACAGAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482820.6
CDS-3UTR CAA 90 bp GAGGGACAAGGTACACAGGGTAATAACCAATGCACTGCATTGAGTTCTATTTGCTTTAGCTGTGTCAACTaGGATGGTGCTGGGGCCATT +
Preference number: 5 (lower is better)
Translates to: EGQGTQGNNQCTALSSICFSCVN*DGAGAI
Trigger: AATGGCCCCAGCACCATCCAAGTTGACACAGCTAAA...GCAAATAGAACTCAATGCAGTGCATTGGTTATTACCCTGTGTACCTTGTCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp CCAATGGAGTCCATCTGCATAGCCCTTGGGACTGTCCAGGTCAACAGTCACACAAATTCTAGCACTTGCTaGGAAAACAAATCAAGTGGT +
Preference number: 5 (lower is better)
Translates to: PMESICIALGTVQVNSHTNSSTC*ENKSSG
Trigger: ACCACTTGATTTGTTTTCCAAGCAAGTGCTAGAATT...TGTGTGACTGTTGACCTGGACAGTCCCAAGGGCTATGCAGATGGACTCCATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp CAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGTCAATGAATTCAGAGGGCTaGGCCAGGAAGAAAAGAGGG +
Preference number: 5 (lower is better)
Translates to: QGAGEISLKSTEEDRGMSMNSEG*ARKKRG
Trigger: CCCTCTTTTCTTCCTGGCCAAGCCCTCTGAATTCAT...TGACATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp TACATAAACTACAACAAACAAATCTGTACAGTTGGGAGGAGGGATAATAGCAGGTACGGCCAGCAGTTCTaGGCGTTTCCTGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: YINYNKQICTVGRRDNSRYGQQF*AFPALL
Trigger: AAGCAGGGCAGGAAACGCCAAGAACTGCTGGCCGTA...CCTGCTATTATCCCTCCTCCCAACTGTACAGATTTGTTTGTTGTAGTTTATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp AATGACCGCATTCTGTATCTTCTGGGATACACACTCATGATACGAAAAGACTATTACGGCCAGCAGTTCTaGGCGTTTCCTGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: NDRILYLLGYTLMIRKDYYGQQF*AFPALL
Trigger: AAGCAGGGCAGGAAACGCCAAGAACTGCTGGCCGTA...ATAGTCTTTTCGTATCATGAGTGTGTATCCCAGAAGATACAGAATGCGGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS TCA 90 bp CTGGTGGTGGCTAATAATATACACTCAGGTCACTTACAAGCAATGTaGCCCTGGATGGGTTACTTAACCTCACTTAGTTTGTGTCCCCCA +
Preference number: 5 (lower is better)
Translates to: LVVANNIHSGHLQAM*PWMGYLTSLSLCPP
Trigger: TGGGGGACACAAACTAAGTGAGGTTAAGTAACCCATCCAGGGTCACATTGCTTGTAAGTGACCTGAGTGTATATTATTAGCCACCACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470261.1
CDS GCA 90 bp GCATTGCTAGTGCAGCTGGAATGTAGACCATCAGCGAACGTGTGTTaGCTTTTTAAACAGTGGGAATCAAACACCACTCGCTTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: ALLVQLECRPSANVC*LFKQWESNTTRFPN
Trigger: ATTTGGAAAGCGAGTGGTGTTTGATTCCCACTGTTTAAAAAGGCAACACACGTTCGCTGATGGTCTACATTCCAGCTGCACTAGCAATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439384.5
CDS GCA 90 bp GGAATGCTAGTGCAGCTGGAATGTAGACCATCAGCGAACGTGTGTTaGCTTTTTAAACAGTGGGAATCAAACACCACTCGCTTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: GMLVQLECRPSANVC*LFKQWESNTTRFPN
Trigger: ATTTGGAAAGCGAGTGGTGTTTGATTCCCACTGTTTAAAAAGGCAACACACGTTCGCTGATGGTCTACATTCCAGCTGCACTAGCATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461824.1
CDS-3UTR CAA 90 bp TCGAACCAGGGAGGAGATCTTTTCCACCGCTGTGTGTTCTTCATGTGTGACGTTTGTACTCGGCAGCTTTaGTTTCTATGTACAGTGTTA +
Preference number: 5 (lower is better)
Translates to: SNQGGDLFHRCVFFMCDVCTRQL*FLCTVL
Trigger: TAACACTGTACATAGAAACAAAAGCTGCCGAGTACA...AACGTCACACATGAAGAACACACAGCGGTGGAAAAGATCTCCTCCCTGGTTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474070.5
CDS-3UTR CAA 90 bp GAGGGACAAGGTACACAGGGTAATAACCAATGCACTGCATTGAGTTCTATTTGCTCATTGGGAACGTGCTaGGAACACTGTTTGTGTACG +
Preference number: 5 (lower is better)
Translates to: EGQGTQGNNQCTALSSICSLGTC*EHCLCT
Trigger: CGTACACAAACAGTGTTCCAAGCACGTTCCCAATGA...GCAAATAGAACTCAATGCAGTGCATTGGTTATTACCCTGTGTACCTTGTCCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS TCA 90 bp AGAGGCAAGAGTGGAAACAGCCAGTTAAGAGGTTATTGTAATCCGTaGCAGATATATTTTCTTCCCCAAGACCATCTCCAGGCCTTTACC +
Preference number: 5 (lower is better)
Translates to: RGKSGNSQLRGYCNP*QIYFLPQDHLQAFT
Trigger: GGTAAAGGCCTGGAGATGGTCTTGGGGAAGAAAATATATCTGTCACGGATTACAATAACCTCTTAACTGGCTGTTTCCACTCTTGCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409964.6
CDS TCA 90 bp TGTAGTTTAAGGTCTGGTTTCCAAACCGCAAAGGTAACTGATGCTTaGAGAGATGGCGGTTCCTGCTTGAGTTTATATGACTGGAACGAG +
Preference number: 5 (lower is better)
Translates to: CSLRSGFQTAKVTDA*RDGGSCLSLYDWNE
Trigger: CTCGTTCCAGTCATATAAACTCAAGCAGGAACCGCCATCTCTTCAAGCATCAGTTACCTTTGCGGTTTGGAAACCAGACCTTAAACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412536.5
CDS GCA 90 bp TTACTGCTAGTGCAGCTGGAATGTAGACCATCAGCGAACGTGTGTTaGCTTTTTAAACAGTGGGAATCAAACACCACTCGCTTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: LLLVQLECRPSANVC*LFKQWESNTTRFPN
Trigger: ATTTGGAAAGCGAGTGGTGTTTGATTCCCACTGTTTAAAAAGGCAACACACGTTCGCTGATGGTCTACATTCCAGCTGCACTAGCAGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470261.1
CDS GCA 90 bp TTCTCTTTAGGAATGTCTGCACAGCCATTGGTACTGCTTTTACAGTaGACAGTGCAACTGAGGCAAACCATCTCCACTGTTCACAATGTT +
Preference number: 5 (lower is better)
Translates to: FSLGMSAQPLVLLLQ*TVQLRQTISTVHNV
Trigger: AACATTGTGAACAGTGGAGATGGTTTGCCTCAGTTGCACTGTGCACTGTAAAAGCAGTACCAATGGCTGTGCAGACATTCCTAAAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483081.1
CDS CCA 90 bp CTGGAATGTAGACCATCAGCGAACGTGTGTTGCCTTTTTAAACAGTaGGAATCAAACACCACTCGCTTTCCAAATGTAAATCCTGGGCTT +
Preference number: 5 (lower is better)
Translates to: LECRPSANVCCLFKQ*ESNTTRFPNVNPGL
Trigger: AAGCCCAGGATTTACATTTGGAAAGCGAGTGGTGTTTGATTCCCACTGTTTAAAAAGGCAACACACGTTCGCTGATGGTCTACATTCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439384.5
ENST00000461824.1
ENST00000470261.1
CDS-3UTR CAA 90 bp AATGACCGCATTCTGTATCTTCTGGGATACACACTCATGATACGAAAAGACTATGGACAAATGATTCTCTaGGGACGAGGTGCCTCTTGC +
Preference number: 5 (lower is better)
Translates to: NDRILYLLGYTLMIRKDYGQMIL*GRGASC
Trigger: GCAAGAGGCACCTCGTCCCAAGAGAATCATTTGTCC...ATAGTCTTTTCGTATCATGAGTGTGTATCCCAGAAGATACAGAATGCGGTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222792.11
CDS-3UTR CAA 90 bp TACATAAACTACAACAAACAAATCTGTACAGTTGGGAGGAGGGATAATAGCAGGTTGAAGTGGTTGTCGTaGTGTGTGAGGGCAGCCCTT +
Preference number: 5 (lower is better)
Translates to: YINYNKQICTVGRRDNSRLKWLS*CVRAAL
Trigger: AAGGGCTGCCCTCACACACAACGACAACCACTTCAA...CCTGCTATTATCCCTCCTCCCAACTGTACAGATTTGTTTGTTGTAGTTTATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp ACACAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGTGCTTGGAACACTGTTaGTGTACGTTCAATCCACAG +
Preference number: 5 (lower is better)
Translates to: TQGAGEISLKSTEEDRGMCLEHC*CTFNPQ
Trigger: CTGTGGATTGAACGTACACAAACAGTGTTCCAAGCA...CATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR CAA 90 bp GAGGGACAAGGTACACAGGGTAATAACCAATGCACTGCATTGAGTTCTATTTGCACTTTCTTGATCCTCTaGAGATCAGGTTGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: EGQGTQGNNQCTALSSICTFLIL*RSGWQS
Trigger: TGACTGCCAACCTGATCTCAAGAGGATCAAGAAAGT...GCAAATAGAACTCAATGCAGTGCATTGGTTATTACCCTGTGTACCTTGTCCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR CAA 90 bp CCACGTAAAATAGTCATTCTCTTCTGCTCACTCCAAAGCAAGACTGGTGAGTTTCTGCACAATCAGCTTTaGGTACCGCATATCATGCAG +
Preference number: 5 (lower is better)
Translates to: PRKIVILFCSLQSKTGEFLHNQL*VPHIMQ
Trigger: CTGCATGATATGCGGTACCAAAAGCTGATTGTGCAG...AAACTCACCAGTCTTGCTTTGGAGTGAGCAGAAGAGAATGACTATTTTACGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp CAAGATAATACTGCATTTGTGGTCAGCTTTTTCAGGGTGTCACAGCAAAATGAGATGAATTCAGAGGGCTaGGCCAGGAAGAAAAGAGGG +
Preference number: 5 (lower is better)
Translates to: QDNTAFVVSFFRVSQQNEMNSEG*ARKKRG
Trigger: CCCTCTTTTCTTCCTGGCCAAGCCCTCTGAATTCAT...CTCATTTTGCTGTGACACCCTGAAAAAGCTGACCACAAATGCAGTATTATCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp CACTCTTCCAGCAAACCAGACATACATAGGAGGCACAGCAAAAGACCCAAGGTGAATACATGTGATGCTTaGCCTTCCATTTACACTATC +
Preference number: 5 (lower is better)
Translates to: HSSSKPDIHRRHSKRPKVNTCDA*PSIYTI
Trigger: GATAGTGTAAATGGAAGGCAAAGCATCACATGTATT...CACCTTGGGTCTTTTGCTGTGCCTCCTATGTATGTCTGGTTTGCTGGAAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp CCACGTAAAATAGTCATTCTCTTCTGCTCACTCCAAAGCAAGACTGGTGAGTTTACTTTCTTGATCCTCTaGAGATCAGGTTGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: PRKIVILFCSLQSKTGEFTFLIL*RSGWQS
Trigger: TGACTGCCAACCTGATCTCAAGAGGATCAAGAAAGT...AAACTCACCAGTCTTGCTTTGGAGTGAGCAGAAGAGAATGACTATTTTACGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR CAA 90 bp ACACAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGCAACAGTACACTTTCTaGATCCTCTTGAGATCAGGT +
Preference number: 5 (lower is better)
Translates to: TQGAGEISLKSTEEDRGMQQYTF*ILLRSG
Trigger: ACCTGATCTCAAGAGGATCAAGAAAGTGTACTGTTG...CATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR CAA 90 bp TACATAAACTACAACAAACAAATCTGTACAGTTGGGAGGAGGGATAATAGCAGGTTTAGCTGTGTCAACTaGGATGGTGCTGGGGCCATT +
Preference number: 5 (lower is better)
Translates to: YINYNKQICTVGRRDNSRFSCVN*DGAGAI
Trigger: AATGGCCCCAGCACCATCCAAGTTGACACAGCTAAA...CCTGCTATTATCCCTCCTCCCAACTGTACAGATTTGTTTGTTGTAGTTTATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp CAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGTCAAACAAATCTGTACAGTaGGGAGGAGGGATAATAGCA +
Preference number: 5 (lower is better)
Translates to: QGAGEISLKSTEEDRGMSNKSVQ*GGGIIA
Trigger: TGCTATTATCCCTCCTCCCAACTGTACAGATTTGTT...TGACATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp ACACAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGAACAAATCTGTACAGTaGGGAGGAGGGATAATAGCA +
Preference number: 5 (lower is better)
Translates to: TQGAGEISLKSTEEDRGMNKSVQ*GGGIIA
Trigger: TGCTATTATCCCTCCTCCCAACTGTACAGATTTGTT...CATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp ACACAAGGGGCAGGTGAAATTTCATTAAAAAGCACTGAGGAGGACAGAGGTATGAGCCTCTCATCTGCATaGGAGATTTCTCTGTCAAAT +
Preference number: 5 (lower is better)
Translates to: TQGAGEISLKSTEEDRGMSLSSA*EISLSN
Trigger: ATTTGACAGAGAAATCTCCAATGCAGATGAGAGGCT...CATACCTCTGTCCTCCTCAGTGCTTTTTAATGAAATTTCACCTGCCCCTTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424025.4
CDS TCA 90 bp AGAGATGATCCCATGAAACCTGAAGGTACAAGACCATCAATGCTCTaGACAGACCACATACAGAATAAGGACCACAAAGAACTAGCCTTA +
Preference number: 5 (lower is better)
Translates to: RDDPMKPEGTRPSML*TDHIQNKDHKELAL
Trigger: TAAGGCTAGTTCTTTGTGGTCCTTATTCTGTATGTGGTCTGTTCAGAGCATTGATGGTCTTGTACCTTCAGGTTTCATGGGATCATCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491856.1
CDS CCA 90 bp TCAGCATTTGCAAATAAGCACCACGTTTCTCAAAAACAAATGCGTTaGTGCGGGTTGGTAGGCACCTCCTTAGCTTTCTCAAAAATTGTA +
Preference number: 5 (lower is better)
Translates to: SAFANKHHVSQKQMR*CGLVGTSLAFSKIV
Trigger: TACAATTTTTGAGAAAGCTAAGGAGGTGCCTACCAACCCGCACCAACGCATTTGTTTTTGAGAAACGTGGTGCTTATTTGCAAATGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409922.5
CDS-3UTR CAA 90 bp CACAAAATTTGTATGCATAGAAAGTGTGTGGACATTTCAGACCATCCTACAATTTCAGGTTGGCAGTCATaGGGAACGTGCTTGGAACAC +
Preference number: 5 (lower is better)
Translates to: HKICMHRKCVDISDHPTISGWQS*GTCLEH
Trigger: GTGTTCCAAGCACGTTCCCAATGACTGCCAACCTGA...AATTGTAGGATGGTCTGAAATGTCCACACACTTTCTATGCATACAAATTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR CAA 90 bp CACAAAATTTGTATGCATAGAAAGTGTGTGGACATTTCAGACCATCCTACAATTCCTCTTGAGATCAGGTaGGCAGTCATTGGGAACGTG +
Preference number: 5 (lower is better)
Translates to: HKICMHRKCVDISDHPTIPLEIR*AVIGNV
Trigger: CACGTTCCCAATGACTGCCAACCTGATCTCAAGAGG...AATTGTAGGATGGTCTGAAATGTCCACACACTTTCTATGCATACAAATTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR CAA 90 bp CCACGTAAAATAGTCATTCTCTTCTGCTCACTCCAAAGCAAGACTGGTGAGTTTCAACAGTACACTTTCTaGATCCTCTTGAGATCAGGT +
Preference number: 5 (lower is better)
Translates to: PRKIVILFCSLQSKTGEFQQYTF*ILLRSG
Trigger: ACCTGATCTCAAGAGGATCAAGAAAGTGTACTGTTG...AAACTCACCAGTCTTGCTTTGGAGTGAGCAGAAGAGAATGACTATTTTACGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR CAA 90 bp CCACGTAAAATAGTCATTCTCTTCTGCTCACTCCAAAGCAAGACTGGTGAGTTTCCGATTTTAATCCTCTaGCTTCAATTTCCCGAATGC +
Preference number: 5 (lower is better)
Translates to: PRKIVILFCSLQSKTGEFPILIL*LQFPEC
Trigger: GCATTCGGGAAATTGAAGCAAGAGGATTAAAATCGG...AAACTCACCAGTCTTGCTTTGGAGTGAGCAGAAGAGAATGACTATTTTACGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222792.11
ENST00000412711.6
CDS-3UTR CAA 90 bp TACATAAACTACAACAAACAAATCTGTACAGTTGGGAGGAGGGATAATAGCAGGTGCTTGGAACACTGTTaGTGTACGTTCAATCCACAG +
Preference number: 5 (lower is better)
Translates to: YINYNKQICTVGRRDNSRCLEHC*CTFNPQ
Trigger: CTGTGGATTGAACGTACACAAACAGTGTTCCAAGCA...CCTGCTATTATCCCTCCTCCCAACTGTACAGATTTGTTTGTTGTAGTTTATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR CAA 90 bp CAAGATAATACTGCATTTGTGGTCAGCTTTTTCAGGGTGTCACAGCAAAATGAGAACAAATCTGTACAGTaGGGAGGAGGGATAATAGCA +
Preference number: 5 (lower is better)
Translates to: QDNTAFVVSFFRVSQQNENKSVQ*GGGIIA
Trigger: TGCTATTATCCCTCCTCCCAACTGTACAGATTTGTT...CTCATTTTGCTGTGACACCCTGAAAAAGCTGACCACAAATGCAGTATTATCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp CCACGTAAAATAGTCATTCTCTTCTGCTCACTCCAAAGCAAGACTGGTGAGTTTTTCATAGTAACCTTTTaGAGGTGGATCATTAGGTAC +
Preference number: 5 (lower is better)
Translates to: PRKIVILFCSLQSKTGEFFIVTF*RWIIRY
Trigger: GTACCTAATGATCCACCTCAAAAAGGTTACTATGAA...AAACTCACCAGTCTTGCTTTGGAGTGAGCAGAAGAGAATGACTATTTTACGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp AATGACCGCATTCTGTATCTTCTGGGATACACACTCATGATACGAAAAGACTATCATTGGAGATTTCTCTaGCTTCAATTTCCCGAATGC +
Preference number: 5 (lower is better)
Translates to: NDRILYLLGYTLMIRKDYHWRFL*LQFPEC
Trigger: GCATTCGGGAAATTGAAGCAAGAGAAATCTCCAATG...ATAGTCTTTTCGTATCATGAGTGTGTATCCCAGAAGATACAGAATGCGGTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409041.7
CDS-3UTR CAA 90 bp CACAAAATTTGTATGCATAGAAAGTGTGTGGACATTTCAGACCATCCTACAATTACTTTCTTGATCCTCTaGAGATCAGGTTGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: HKICMHRKCVDISDHPTITFLIL*RSGWQS
Trigger: TGACTGCCAACCTGATCTCAAGAGGATCAAGAAAGT...AATTGTAGGATGGTCTGAAATGTCCACACACTTTCTATGCATACAAATTTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
CDS-3UTR CAA 90 bp CAAGATAATACTGCATTTGTGGTCAGCTTTTTCAGGGTGTCACAGCAAAATGAGAATTCTAGCACTTGCTaGGAAAACAAATCAAGTGGT +
Preference number: 5 (lower is better)
Translates to: QDNTAFVVSFFRVSQQNENSSTC*ENKSSG
Trigger: ACCACTTGATTTGTTTTCCAAGCAAGTGCTAGAATT...CTCATTTTGCTGTGACACCCTGAAAAAGCTGACCACAAATGCAGTATTATCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp TACATAAACTACAACAAACAAATCTGTACAGTTGGGAGGAGGGATAATAGCAGGAAGATAATACTGCATTaGTGGTCAGCTTTTTCAGGG +
Preference number: 5 (lower is better)
Translates to: YINYNKQICTVGRRDNSRKIILH*WSAFSG
Trigger: CCCTGAAAAAGCTGACCACAAATGCAGTATTATCTT...CCTGCTATTATCCCTCCTCCCAACTGTACAGATTTGTTTGTTGTAGTTTATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp TACATAAACTACAACAAACAAATCTGTACAGTTGGGAGGAGGGATAATAGCAGGCACACAGAGCTACTTTaGTCAAGGAGGAACAAATAT +
Preference number: 5 (lower is better)
Translates to: YINYNKQICTVGRRDNSRHTELL*SRRNKY
Trigger: ATATTTGTTCCTCCTTGACAAAAGTAGCTCTGTGTG...CCTGCTATTATCCCTCCTCCCAACTGTACAGATTTGTTTGTTGTAGTTTATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp AATGACCGCATTCTGTATCTTCTGGGATACACACTCATGATACGAAAAGACTATCACACAGAGCTACTTTaGTCAAGGAGGAACAAATAT +
Preference number: 5 (lower is better)
Translates to: NDRILYLLGYTLMIRKDYHTELL*SRRNKY
Trigger: ATATTTGTTCCTCCTTGACAAAAGTAGCTCTGTGTG...ATAGTCTTTTCGTATCATGAGTGTGTATCCCAGAAGATACAGAATGCGGTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp CAAGATAATACTGCATTTGTGGTCAGCTTTTTCAGGGTGTCACAGCAAAATGAGAATACATGTGATGCTTaGCCTTCCATTTACACTATC +
Preference number: 5 (lower is better)
Translates to: QDNTAFVVSFFRVSQQNENTCDA*PSIYTI
Trigger: GATAGTGTAAATGGAAGGCAAAGCATCACATGTATT...CTCATTTTGCTGTGACACCCTGAAAAAGCTGACCACAAATGCAGTATTATCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp TACATAAACTACAACAAACAAATCTGTACAGTTGGGAGGAGGGATAATAGCAGGTTCATAGTAACCTTTTaGAGGTGGATCATTAGGTAC +
Preference number: 5 (lower is better)
Translates to: YINYNKQICTVGRRDNSRFIVTF*RWIIRY
Trigger: GTACCTAATGATCCACCTCAAAAAGGTTACTATGAA...CCTGCTATTATCCCTCCTCCCAACTGTACAGATTTGTTTGTTGTAGTTTATGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp AATGACCGCATTCTGTATCTTCTGGGATACACACTCATGATACGAAAAGACTATAATTCTAGCACTTGCTaGGAAAACAAATCAAGTGGT +
Preference number: 5 (lower is better)
Translates to: NDRILYLLGYTLMIRKDYNSSTC*ENKSSG
Trigger: ACCACTTGATTTGTTTTCCAAGCAAGTGCTAGAATT...ATAGTCTTTTCGTATCATGAGTGTGTATCCCAGAAGATACAGAATGCGGTCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp CACAAAATTTGTATGCATAGAAAGTGTGTGGACATTTCAGACCATCCTACAATTCACACAGAGCTACTTTaGTCAAGGAGGAACAAATAT +
Preference number: 5 (lower is better)
Translates to: HKICMHRKCVDISDHPTIHTELL*SRRNKY
Trigger: ATATTTGTTCCTCCTTGACAAAAGTAGCTCTGTGTG...AATTGTAGGATGGTCTGAAATGTCCACACACTTTCTATGCATACAAATTTTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS-3UTR CAA 90 bp CACAAAATTTGTATGCATAGAAAGTGTGTGGACATTTCAGACCATCCTACAATTTTCATAGTAACCTTTTaGAGGTGGATCATTAGGTAC +
Preference number: 5 (lower is better)
Translates to: HKICMHRKCVDISDHPTIFIVTF*RWIIRY
Trigger: GTACCTAATGATCCACCTCAAAAAGGTTACTATGAA...AATTGTAGGATGGTCTGAAATGTCCACACACTTTCTATGCATACAAATTTTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000412711.6
ENST00000424025.4
CDS GCA 72 bp CACCGACGAGCCGGACAGGCTGGAGTTGCTGGACGCTaGCATCTCCGCGCGCCCCTCGCGTCGCTGCTCGCT +
Preference number: 6 (lower is better)
Translates to: HRRAGQAGVAGR*HLRAPLASLLA
Trigger: AGCGAGCAGCGACGCGAGGGGCGCGCGGAGATGGCAGCGTCCAGCAACTCCAGCCTGTCCGGCTCGTCGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222792.11
CDS CCA 72 bp CGGAGGACACCGACGAGCCGGACAGGCTGGAGTTGCTaGACGCTGCCATCTCCGCGCGCCCCTCGCGTCGCT +
Preference number: 6 (lower is better)
Translates to: RRTPTSRTGWSC*TLPSPRAPRVA
Trigger: AGCGACGCGAGGGGCGCGCGGAGATGGCAGCGTCCAGCAACTCCAGCCTGTCCGGCTCGTCGGTGTCCTCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222792.11
CDS GCA 72 bp CATCGGAGGACACCGACGAGCCGGACAGGCTGGAGTTaGTGGACGCTGCCATCTCCGCGCGCCCCTCGCGTC +
Preference number: 6 (lower is better)
Translates to: HRRTPTSRTGWS*WTLPSPRAPRV
Trigger: GACGCGAGGGGCGCGCGGAGATGGCAGCGTCCAGCAACTCCAGCCTGTCCGGCTCGTCGGTGTCCTCCGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222792.11
CDS CCA 72 bp CGCAGCCTCCGCGGCCCCCAGCCCATGGCAAAGTCCTaGGGACGCGCAGAAAGCACCAGCCTCCGGACTCTG +
Preference number: 6 (lower is better)
Translates to: RSLRGPQPMAKS*GRAESTSLRTL
Trigger: CAGAGTCCGGAGGCTGGTGCTTTCTGCGCGTCCCCAGGACTTTGCCATGGGCTGGGGGCCGCGGAGGCTGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222792.11
CDS CCA 72 bp GGCCTGGGCAAAGAGCCCTGGGGGCAGCCTTGCGGATaGGTTGGCGGGTGGGTTGGCAGTGAGTGTGGGGGT +
Preference number: 6 (lower is better)
Translates to: GLGKEPWGQPCG*VGGWVGSECGG
Trigger: ACCCCCACACTCACTGCCAACCCACCCGCCAACCCATCCGCAAGGCTGCCCCCAGGGCTCTTTGCCCAGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000491856.1
CDS CCA 72 bp CTTCAGCATCGGAGGACACCGACGAGCCGGACAGGCTaGAGTTGCTGGACGCTGCCATCTCCGCGCGCCCCT +
Preference number: 6 (lower is better)
Translates to: LQHRRTPTSRTG*SCWTLPSPRAP
Trigger: AGGGGCGCGCGGAGATGGCAGCGTCCAGCAACTCCAGCCTGTCCGGCTCGTCGGTGTCCTCCGATGCTGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222792.11
CDS CAA 90 bp TATTCTTCAGCATCGGAGGACACCGACGAGCCGGACAGGCTGGAGTaGCTGGACGCTGCCATCTCCGCGCGCCCCTCGCGTCGCTGCTCG +
Preference number: 6 (lower is better)
Translates to: YSSASEDTDEPDRLE*LDAAISARPSRRCS
Trigger: CGAGCAGCGACGCGAGGGGCGCGCGGAGATGGCAGCGTCCAGCAACTCCAGCCTGTCCGGCTCGTCGGTGTCCTCCGATGCTGAAGAATA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222792.11
CDS CCA 72 bp CAGAATAGACGGAGGACACCGACGAGCCGGACAGGCTaGAGTTGCTGGACGCTGCCATCTCCGCGCGCCCCT +
Preference number: 6 (lower is better)
Translates to: QNRRRTPTSRTG*SCWTLPSPRAP
Trigger: AGGGGCGCGCGGAGATGGCAGCGTCCAGCAACTCCAGCCTGTCCGGCTCGTCGGTGTCCTCCGTCTATTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409350.5
CDS TCA 72 bp CACAGCAACCCCCAGAAGCGGTATCCAGTCAGCCACTaGGGATTCAGGGAGGCAGGGGCCGGCAGCCTGCTT +
Preference number: 6 (lower is better)
Translates to: HSNPQKRYPVSH*GFREAGAGSLL
Trigger: AAGCAGGCTGCCGGCCCCTGCCTCCCTGAATCCTCAGTGGCTGACTGGATACCGCTTCTGGGGGTTGCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412711.6
CDS GCA 72 bp GAGGCAGAGCCCAGTCTCAGGGGGTCTAACTGGCCCTaGATAGCAGGTGTGGATTGGAACCGGGAGGCCAGT +
Preference number: 6 (lower is better)
Translates to: EAEPSLRGSNWP*IAGVDWNREAS
Trigger: ACTGGCCTCCCGGTTCCAATCCACACCTGCTATGCAGGGCCAGTTAGACCCCCTGAGACTGGGCTCTGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491856.1
CDS CCA 72 bp GGGACTGAGGCAGAGCCCAGTCTCAGGGGGTCTAACTaGCCCTGCATAGCAGGTGTGGATTGGAACCGGGAG +
Preference number: 6 (lower is better)
Translates to: GTEAEPSLRGSN*PCIAGVDWNRE
Trigger: CTCCCGGTTCCAATCCACACCTGCTATGCAGGGCCAGTTAGACCCCCTGAGACTGGGCTCTGCCTCAGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491856.1
CDS CAA 90 bp TCCACCCTGGGGCTGCTTGCTTCTTCCAGCATGGGAAGCGCTGACTaGATGCGGCCAGGTTTCTGGGACCAGGAGGTTGGGACACGACGA +
Preference number: 6 (lower is better)
Translates to: STLGLLASSSMGSAD*MRPGFWDQEVGTRR
Trigger: TCGTCGTGTCCCAACCTCCTGGTCCCAGAAACCTGGCCGCATCAAGTCAGCGCTTCCCATGCTGGAAGAAGCAAGCAGCCCCAGGGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439384.5
ENST00000461824.1
ENST00000474070.5
CDS TCA 72 bp CCTGGGGCTGCTTGCTTCTTCCAGCATGGGAAGCGCTaGCTTGATGCGGCCAGGTTTCTGGGACCAGGAGGT +
Preference number: 6 (lower is better)
Translates to: PGAACFFQHGKR*LDAARFLGPGG
Trigger: ACCTCCTGGTCCCAGAAACCTGGCCGCATCAAGTCAGCGCTTCCCATGCTGGAAGAAGCAAGCAGCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439384.5
ENST00000461824.1
ENST00000474070.5
CDS CAA 72 bp GGGCTGCTTGCTTCTTCCAGCATGGGAAGCGCTGACTaGATGCGGCCAGGTTTCTGGGACCAGGAGGTTGGG +
Preference number: 6 (lower is better)
Translates to: GLLASSSMGSAD*MRPGFWDQEVG
Trigger: CCCAACCTCCTGGTCCCAGAAACCTGGCCGCATCAAGTCAGCGCTTCCCATGCTGGAAGAAGCAAGCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439384.5
ENST00000461824.1
ENST00000474070.5
CDS TCA 72 bp GGCTGCTTGCTTCTTCCAGCATGGGAAGCGCTGACTTaGTGCGGCCAGGTTTCTGGGACCAGGAGGTTGGGA +
Preference number: 6 (lower is better)
Translates to: GCLLLPAWEALT*CGQVSGTRRLG
Trigger: TCCCAACCTCCTGGTCCCAGAAACCTGGCCGCATCAAGTCAGCGCTTCCCATGCTGGAAGAAGCAAGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439384.5
ENST00000461824.1
ENST00000474070.5
CDS GCA 72 bp TGGGACCAGGAGGTTGGGACACGACGACGCACTTTTTaGCCTGTGGGTCTGGGTCATGTGAGCCTAGAGGAG +
Preference number: 6 (lower is better)
Translates to: WDQEVGTRRRTF*PVGLGHVSLEE
Trigger: CTCCTCTAGGCTCACATGACCCAGACCCACAGGGCAAAAAGTGCGTCGTCGTGTCCCAACCTCCTGGTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439384.5
CDS CCA 72 bp CCCACCTTCACCCCGAAGGCTACGGCCAGCAGTTCTTaGCGTTTCCTGCCCTGCTTAGACTTCCGAACCACA +
Preference number: 6 (lower is better)
Translates to: PTFTPKATASSS*RFLPCLDFRTT
Trigger: TGTGGTTCGGAAGTCTAAGCAGGGCAGGAAACGCCAAGAACTGCTGGCCGTAGCCTTCGGGGTGAAGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409041.7
ENST00000412711.6
ENST00000421775.6
ENST00000424025.4
ENST00000439711.6
CDS CCA 72 bp AGGGGGTCTAACTGGCCCTGCATAGCAGGTGTGGATTaGAACCGGGAGGCCAGTTTATTGGGGCCTGGAGCA +
Preference number: 6 (lower is better)
Translates to: RGSNWPCIAGVD*NREASLLGPGA
Trigger: TGCTCCAGGCCCCAATAAACTGGCCTCCCGGTTCCAATCCACACCTGCTATGCAGGGCCAGTTAGACCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491856.1
CDS CAA 72 bp ACCCACCTTCACCCCGAAGGCTACGGCCAGCAGTTCTaGGCGTTTCCTGCCCTGCTTAGACTTCCGAACCAC +
Preference number: 6 (lower is better)
Translates to: THLHPEGYGQQF*AFPALLRLPNH
Trigger: GTGGTTCGGAAGTCTAAGCAGGGCAGGAAACGCCAAGAACTGCTGGCCGTAGCCTTCGGGGTGAAGGTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409041.7
ENST00000412711.6
ENST00000421775.6
ENST00000424025.4
ENST00000439711.6
CDS CAA 72 bp GCAAAGAGTTTGAGAGGGGGCCAAAGAAAGCCGCCTTaGACACCCACCTTCACCCCGAAGGCTACGGCCAGC +
Preference number: 6 (lower is better)
Translates to: AKSLRGGQRKPP*TPTFTPKATAS
Trigger: GCTGGCCGTAGCCTTCGGGGTGAAGGTGGGTGTCAAAGGCGGCTTTCTTTGGCCCCCTCTCAAACTCTTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409041.7
ENST00000412711.6
ENST00000421775.6
ENST00000424025.4
ENST00000439711.6
CDS CAA 72 bp CTGGGACCAGGAGGTTGGGACACGACGACGCACTTTTaGCCCTGTGGGTCTGGGTCATGTGAGCCTAGAGGA +
Preference number: 6 (lower is better)
Translates to: LGPGGWDTTTHF*PCGSGSCEPRG
Trigger: TCCTCTAGGCTCACATGACCCAGACCCACAGGGCAAAAAGTGCGTCGTCGTGTCCCAACCTCCTGGTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439384.5
CDS CAA 72 bp GTGGACCTTCACCCCGAAGGCTACGGCCAGCAGTTCTaGGCGTTTCCTGCCCTGCTTAGACTTCCGAACCAC +
Preference number: 6 (lower is better)
Translates to: VDLHPEGYGQQF*AFPALLRLPNH
Trigger: GTGGTTCGGAAGTCTAAGCAGGGCAGGAAACGCCAAGAACTGCTGGCCGTAGCCTTCGGGGTGAAGGTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467441.5
CDS CAA 90 bp GCCTTTGACACCCACCTTCACCCCGAAGGCTACGGCCAGCAGTTCTaGGCGTTTCCTGCCCTGCTTAGACTTCCGAACCACAGCACACTT +
Preference number: 6 (lower is better)
Translates to: AFDTHLHPEGYGQQF*AFPALLRLPNHSTL
Trigger: AAGTGTGCTGTGGTTCGGAAGTCTAAGCAGGGCAGGAAACGCCAAGAACTGCTGGCCGTAGCCTTCGGGGTGAAGGTGGGTGTCAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409041.7
ENST00000412711.6
ENST00000421775.6
ENST00000424025.4
ENST00000439711.6
CDS CAA 90 bp TCGGAACGTGTGGACCTTCACCCCGAAGGCTACGGCCAGCAGTTCTaGGCGTTTCCTGCCCTGCTTAGACTTCCGAACCACAGCACACTT +
Preference number: 6 (lower is better)
Translates to: SERVDLHPEGYGQQF*AFPALLRLPNHSTL
Trigger: AAGTGTGCTGTGGTTCGGAAGTCTAAGCAGGGCAGGAAACGCCAAGAACTGCTGGCCGTAGCCTTCGGGGTGAAGGTCCACACGTTCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467441.5
CDS TCA 72 bp CAGCAGCCTCCGGCATGTGACCTGAAAGGCCCAGTTTaGGTGATGGAGGGGGCCCGGCTTCTGAATAAGGAT +
Preference number: 6 (lower is better)
Translates to: QQPPACDLKGPV*VMEGARLLNKD
Trigger: ATCCTTATTCAGAAGCCGGGCCCCCTCCATCACTCAAACTGGGCCTTTCAGGTCACATGCCGGAGGCTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412711.6
CDS TCA 72 bp GATTTTCGAACCGCAGCTTATGTTAGGCGGCAGATTTaGGGCAGCTGGGTCCTGTCTGCAGCAGCCTCCGGC +
Preference number: 6 (lower is better)
Translates to: DFRTAAYVRRQI*GSWVLSAAASG
Trigger: GCCGGAGGCTGCTGCAGACAGGACCCAGCTGCCTCAAATCTGCCGCCTAACATAAGCTGCGGTTCGAAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412711.6
ENST00000467441.5
CDS GCA 72 bp GTGGCTCTGAGACTCCAGCGCAGTGATTCAGGAGAGTaGTTGGCAGGACAGTGGCACTTGGTGCGAGCTTAC +
Preference number: 6 (lower is better)
Translates to: VALRLQRSDSGE*LAGQWHLVRAY
Trigger: GTAAGCTCGCACCAAGTGCCACTGTCCTGCCAAGCACTCTCCTGAATCACTGCGCTGGAGTCTCAGAGCCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470261.1
CDS CCA 72 bp AGCATGGGAAGCGCTGACTTGATGCGGCCAGGTTTCTaGGACCAGGAGGTTGGGACACGACGACGCACTTTT +
Preference number: 6 (lower is better)
Translates to: SMGSADLMRPGF*DQEVGTRRRTF
Trigger: AAAAGTGCGTCGTCGTGTCCCAACCTCCTGGTCCCAGAAACCTGGCCGCATCAAGTCAGCGCTTCCCATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439384.5
ENST00000461824.1
ENST00000474070.5
CDS CCA 72 bp TGGACCTTCACCCCGAAGGCTACGGCCAGCAGTTCTTaGCGTTTCCTGCCCTGCTTAGACTTCCGAACCACA +
Preference number: 6 (lower is better)
Translates to: WTFTPKATASSS*RFLPCLDFRTT
Trigger: TGTGGTTCGGAAGTCTAAGCAGGGCAGGAAACGCCAAGAACTGCTGGCCGTAGCCTTCGGGGTGAAGGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467441.5
CDS CAA 72 bp GCTCTGAGACTCCAGCGCAGTGATTCAGGAGAGTGCTaGGCAGGACAGTGGCACTTGGTGCGAGCTTACTGC +
Preference number: 6 (lower is better)
Translates to: ALRLQRSDSGEC*AGQWHLVRAYC
Trigger: GCAGTAAGCTCGCACCAAGTGCCACTGTCCTGCCAAGCACTCTCCTGAATCACTGCGCTGGAGTCTCAGAGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470261.1
CDS CAA 90 bp TGTGAACAGGCAAAGAGTTTGAGAGGGGGCCAAAGAAAGCCGCCTTaGACACCCACCTTCACCCCGAAGGCTACGGCCAGCAGTTCTTGG +
Preference number: 6 (lower is better)
Translates to: CEQAKSLRGGQRKPP*TPTFTPKATASSSW
Trigger: CCAAGAACTGCTGGCCGTAGCCTTCGGGGTGAAGGTGGGTGTCAAAGGCGGCTTTCTTTGGCCCCCTCTCAAACTCTTTGCCTGTTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409041.7
ENST00000412711.6
ENST00000421775.6
ENST00000424025.4
ENST00000439711.6
CDS CAA 90 bp GCAGCCCTTCGAACCAGGGAGGAGATCTGTGAACAGGCAAAGAGTTaGAGAGGGGGCCAAAGAAAGCCGCCTTTGACACCCACCTTCACC +
Preference number: 6 (lower is better)
Translates to: AALRTREEICEQAKS*RGGQRKPPLTPTFT
Trigger: GGTGAAGGTGGGTGTCAAAGGCGGCTTTCTTTGGCCCCCTCTCAAACTCTTTGCCTGTTCACAGATCTCCTCCCTGGTTCGAAGGGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409041.7
ENST00000412711.6
ENST00000421775.6
ENST00000424025.4
ENST00000439711.6
CDS CAA 72 bp GGAGCTTTGATAGTGAGGTCACTGGACCTAGGAACTTaGCGGAGGAGCCTCCTGTGCAGCCTGAGCCAGGTT +
Preference number: 6 (lower is better)
Translates to: GALIVRSLDLGT*RRSLLCSLSQV
Trigger: AACCTGGCTCAGGCTGCACAGGAGGCTCCTCCGCAAAGTTCCTAGGTCCAGTGACCTCACTATCAAAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491856.1
CDS CAA 90 bp AGAGGTGTTGGAGCTTTGATAGTGAGGTCACTGGACCTAGGAACTTaGCGGAGGAGCCTCCTGTGCAGCCTGAGCCAGGTTGGAGAGGAT +
Preference number: 6 (lower is better)
Translates to: RGVGALIVRSLDLGT*RRSLLCSLSQVGED
Trigger: ATCCTCTCCAACCTGGCTCAGGCTGCACAGGAGGCTCCTCCGCAAAGTTCCTAGGTCCAGTGACCTCACTATCAAAGCTCCAACACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491856.1
CDS TCA 72 bp TCCTCCGGCATCCCAGGGCTAGTTGAGTTGGCACGATaGAGCGTGTCCACACACAGCCAAATGCTCAATCTC +
Preference number: 6 (lower is better)
Translates to: SSGIPGLVELAR*SVSTHSQMLNL
Trigger: GAGATTGAGCATTTGGCTGTGTGTGGACACGCTTCATCGTGCCAACTCAACTAGCCCTGGGATGCCGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409922.5
CDS TCA 72 bp CAGAACACATCAGGTGGCTCTGAGACTCCAGCGCAGTaGTTCAGGAGAGTGCTTGGCAGGACAGTGGCACTT +
Preference number: 6 (lower is better)
Translates to: QNTSGGSETPAQ*FRRVLGRTVAL
Trigger: AAGTGCCACTGTCCTGCCAAGCACTCTCCTGAATCACTGCGCTGGAGTCTCAGAGCCACCTGATGTGTTCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470261.1
CDS CCA 72 bp GAGTCGTTTGATCCTGAGAGCCAGCGTGTAGCATCCTaGTTGCCGCTGGCTTTCTCTAAGGATGTAGGCACC +
Preference number: 6 (lower is better)
Translates to: ESFDPESQRVAS*LPLAFSKDVGT
Trigger: GGTGCCTACATCCTTAGAGAAAGCCAGCGGCAACCAGGATGCTACACGCTGGCTCTCAGGATCAAACGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412536.5
CDS GCA 72 bp GGGGCCCGGCTTCTGAATAAGGATGGGCCTGTTTTGTaGTATTTCTTAAGGCCGACGTGCGCCTGGAACAAT +
Preference number: 6 (lower is better)
Translates to: GARLLNKDGPVL*YFLRPTCAWNN
Trigger: ATTGTTCCAGGCGCACGTCGGCCTTAAGAAATAGCACAAAACAGGCCCATCCTTATTCAGAAGCCGGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412711.6
CDS GCA 72 bp GCATGTGGAAAATGTGGCATATCCGGGAGGGTTGTGTaGTGGCCCATGATCACTCTGATGTGGAGGCAGTTG +
Preference number: 6 (lower is better)
Translates to: ACGKCGISGRVV*WPMITLMWRQL
Trigger: CAACTGCCTCCACATCAGAGTGATCATGGGCCAGCACACAACCCTCCCGGATATGCCACATTTTCCACATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491856.1
CDS CCA 72 bp TGTGGATTGGAACCGGGAGGCCAGTTTATTGGGGCCTaGAGCAGAGGTGTTGGAGCTTTGATAGTGAGGTCA +
Preference number: 6 (lower is better)
Translates to: CGLEPGGQFIGA*SRGVGALIVRS
Trigger: TGACCTCACTATCAAAGCTCCAACACCTCTGCTCCAGGCCCCAATAAACTGGCCTCCCGGTTCCAATCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491856.1
CDS CAA 72 bp GTAGGAGTTGGGTCAGGAACCAGCCCACGTTCCCTGTaGCCTTTAAGTAAATACAGCTGCTCCTCCCACAGG +
Preference number: 6 (lower is better)
Translates to: VGVGSGTSPRSL*PLSKYSCSSHR
Trigger: CCTGTGGGAGGAGCAGCTGTATTTACTTAAAGGCAACAGGGAACGTGGGCTGGTTCCTGACCCAACTCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491856.1
CDS TCA 72 bp TTTGTGATTTTCTTCCTCCGGCATCCCAGGGCTAGTTaGGTTGGCACGATGAAGCGTGTCCACACACAGCCA +
Preference number: 6 (lower is better)
Translates to: FVIFFLRHPRAS*VGTMKRVHTQP
Trigger: TGGCTGTGTGTGGACACGCTTCATCGTGCCAACTCAACTAGCCCTGGGATGCCGGAGGAAGAAAATCACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409922.5
CDS GCA 72 bp AAGGCTACGGCCAGCAGTTCTTGGCGTTTCCTGCCCTaGTTAGACTTCCGAACCACAGCACACTTTTTCTCA +
Preference number: 6 (lower is better)
Translates to: KATASSSWRFLP*LDFRTTAHFFS
Trigger: TGAGAAAAAGTGTGCTGTGGTTCGGAAGTCTAAGCAGGGCAGGAAACGCCAAGAACTGCTGGCCGTAGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000409041.7
ENST00000412711.6
ENST00000421775.6
ENST00000424025.4
ENST00000439711.6
ENST00000467441.5
CDS GCA 72 bp CCGCCTGTTGATGCGGCATGGATTAAAACGAAAGGCTaGTTCCATCACACACAGCTCACCTTTTCCACCGCT +
Preference number: 6 (lower is better)
Translates to: PPVDAAWIKTKG*FHHTQLTFSTA
Trigger: AGCGGTGGAAAAGGTGAGCTGTGTGTGATGGAAGCAGCCTTTCGTTTTAATCCATGCCGCATCAACAGGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491856.1
CDS CCA 72 bp ATTCTTCAGCATATTTTGGAAGCTCTCTCGGGCTTCTaGGTTCAGAATAGACGGAGGACACCGACGAGCCGG +
Preference number: 6 (lower is better)
Translates to: ILQHILEALSGF*VQNRRRTPTSR
Trigger: CCGGCTCGTCGGTGTCCTCCGTCTATTCTGAACCCAGAAGCCCGAGAGAGCTTCCAAAATATGCTGAAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409350.5
CDS CCA 72 bp GCTCCCGTACTGTCTGGCTCGATGCCCAGCACCTGGTaGTGGCTAATAATATACACTCAGGTCACTTACAAG +
Preference number: 6 (lower is better)
Translates to: APVLSGSMPSTW*WLIIYTQVTYK
Trigger: CTTGTAAGTGACCTGAGTGTATATTATTAGCCACCACCAGGTGCTGGGCATCGAGCCAGACAGTACGGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470261.1
CDS CCA 72 bp CTTGCTCCCGTACTGTCTGGCTCGATGCCCAGCACCTaGTGGTGGCTAATAATATACACTCAGGTCACTTAC +
Preference number: 6 (lower is better)
Translates to: LAPVLSGSMPST*WWLIIYTQVTY
Trigger: GTAAGTGACCTGAGTGTATATTATTAGCCACCACCAGGTGCTGGGCATCGAGCCAGACAGTACGGGAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470261.1
CDS TCA 72 bp CGCTCTAGGAGCAGAGCAGGCTTTGTGCACGAGACATaGGCTTACTTTTTGAGGTGGATCATTAGGTACCGG +
Preference number: 6 (lower is better)
Translates to: RSRSRAGFVHET*AYFLRWIIRYR
Trigger: CCGGTACCTAATGATCCACCTCAAAAAGTAAGCTCATGTCTCGTGCACAAAGCCTGCTCTGCTCCTAGAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433720.1
CDS TCA 72 bp GTGCTTCCTGTCTCATTTCCTCCTCCCGAGGACAAATaGTTCTCTTGGGACGAGGTGCCTCTTGCTGTAACT +
Preference number: 6 (lower is better)
Translates to: VLPVSFPPPEDK*FSWDEVPLAVT
Trigger: AGTTACAGCAAGAGGCACCTCGTCCCAAGAGAATCATTTGTCCTCGGGAGGAGGAAATGAGACAGGAAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482820.6
CDS GCA 72 bp GCTGGTATTCTTCAGCATCTCCTTTCTGACTCCCTGTaGAGAGAGGACATCTTCCTAGACAGGATCCCAAGC +
Preference number: 6 (lower is better)
Translates to: AGILQHLLSDSL*REDIFLDRIPS
Trigger: GCTTGGGATCCTGTCTAGGAAGATGTCCTCTCTGCACAGGGAGTCAGAAAGGAGATGCTGAAGAATACCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409964.6
CDS GCA 72 bp TCTTCTCTTGTAGGCAAACGGCCCATTAGCTCTTGCTaGTCATGGAAAAACTCCCATCACGACTGTCCCCAG +
Preference number: 6 (lower is better)
Translates to: SSLVGKRPISSC*SWKNSHHDCPQ
Trigger: CTGGGGACAGTCGTGATGGGAGTTTTTCCATGAGCAGCAAGAGCTAATGGGCCGTTTGCCTACAAGAGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483081.1
CDS GCA 72 bp GCATCTTCTCTTGTAGGCAAACGGCCCATTAGCTCTTaGTGCTCATGGAAAAACTCCCATCACGACTGTCCC +
Preference number: 6 (lower is better)
Translates to: ASSLVGKRPISS*CSWKNSHHDCP
Trigger: GGGACAGTCGTGATGGGAGTTTTTCCATGAGCAGCAAGAGCTAATGGGCCGTTTGCCTACAAGAGAAGATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483081.1
CDS CCA 72 bp GAGCCGTCGTCTATTTTGGAAGCTCTCTCGGGCTTCTaGGTTCAGAATAGACTGAAGAGAGGCAAGAGTGGA +
Preference number: 6 (lower is better)
Translates to: EPSSILEALSGF*VQNRLKRGKSG
Trigger: TCCACTCTTGCCTCTCTTCAGTCTATTCTGAACCCAGAAGCCCGAGAGAGCTTCCAAAATAGACGACGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409964.6
CDS CCA 72 bp CGCCGATGCTCTTCATTAATTTTTAAGATTCCACCCTaGGGCTGCTTGCTTCTTCCAGCATGGGAAGCGCTG +
Preference number: 6 (lower is better)
Translates to: RRCSSLIFKIPP*GCLLLPAWEAL
Trigger: CAGCGCTTCCCATGCTGGAAGAAGCAAGCAGCCCCAGGGTGGAATCTTAAAAATTAATGAAGAGCATCGGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439384.5
ENST00000461824.1
ENST00000470261.1
ENST00000474070.5
CDS TCA 72 bp AATGGGTATAATGGTACAGAACACATCAGGTGGCTCTaGGACTCCAGCGCAGTGATTCAGGAGAGTGCTTGG +
Preference number: 6 (lower is better)
Translates to: NGYNGTEHIRWL*DSSAVIQESAW
Trigger: CCAAGCACTCTCCTGAATCACTGCGCTGGAGTCTCAGAGCCACCTGATGTGTTCTGTACCATTATACCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470261.1
CDS TCA 72 bp AGAAGCTCATCCGCCTGCTCCCGAGAGATGATCCCATaGAACCTGAAGGTACAAGACCATCAATGCTCTGAA +
Preference number: 6 (lower is better)
Translates to: RSSSACSREMIP*NLKVQDHQCSE
Trigger: TTCAGAGCATTGATGGTCTTGTACCTTCAGGTTTCATGGGATCATCTCTCGGGAGCAGGCGGATGAGCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491856.1
CDS CCA 72 bp TCCCAGCTGATGCTGGGATCACACTCCGTGACTCACTaGATTAGAAGCCCAGCCATTGATATGAACTATCTG +
Preference number: 6 (lower is better)
Translates to: SQLMLGSHSVTH*IRSPAIDMNYL
Trigger: CAGATAGTTCATATCAATGGCTGGGCTTCTAATCCAGTGAGTCACGGAGTGTGATCCCAGCATCAGCTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482820.6
CDS CAA 90 bp TTCTTGATCCTCTTGAGATCAGGTTGGCAGTCATTGGGAACGTGCTaGGAACACTGTTTGTGTACGTTCAATCCACAGTCTGAGCACCGG +
Preference number: 6 (lower is better)
Translates to: FLILLRSGWQSLGTC*EHCLCTFNPQSEHR
Trigger: CCGGTGCTCAGACTGTGGATTGAACGTACACAAACAGTGTTCCAAGCACGTTCCCAATGACTGCCAACCTGATCTCAAGAGGATCAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000410098.1
ENST00000412711.6
ENST00000439711.6
ENST00000446446.5
ENST00000467441.5
ENST00000493906.5
CDS GCA 72 bp GATGGGCCTGTTTTGTGCTATTTCTTAAGGCCGACGTaGGCCTGGAACAATAGCAAACATTCATGTGCACAG +
Preference number: 6 (lower is better)
Translates to: DGPVLCYFLRPT*AWNNSKHSCAQ
Trigger: CTGTGCACATGAATGTTTGCTATTGTTCCAGGCGCACGTCGGCCTTAAGAAATAGCACAAAACAGGCCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412711.6
CDS GCA 72 bp GTGCAGCTGGAATGTAGACCATCAGCGAACGTGTGTTaGCTTTTTAAACAGTGGGAATCAAACACCACTCGC +
Preference number: 6 (lower is better)
Translates to: VQLECRPSANVC*LFKQWESNTTR
Trigger: GCGAGTGGTGTTTGATTCCCACTGTTTAAAAAGGCAACACACGTTCGCTGATGGTCTACATTCCAGCTGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439384.5
ENST00000461824.1
ENST00000470261.1
CDS GCA 72 bp GGAATGTCTGCACAGCCATTGGTACTGCTTTTACAGTaGACAGTGCAACTGAGGCAAACCATCTCCACTGTT +
Preference number: 6 (lower is better)
Translates to: GMSAQPLVLLLQ*TVQLRQTISTV
Trigger: AACAGTGGAGATGGTTTGCCTCAGTTGCACTGTGCACTGTAAAAGCAGTACCAATGGCTGTGCAGACATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483081.1
CDS CCA 72 bp ATCGCACCTATAGTTAACCCGCCTGTTGATGCGGCATaGATTAAAACGAAAGGCTGCTTCCATCACACACAG +
Preference number: 6 (lower is better)
Translates to: IAPIVNPPVDAA*IKTKGCFHHTQ
Trigger: CTGTGTGTGATGGAAGCAGCCTTTCGTTTTAATCCATGCCGCATCAACAGGCGGGTTAACTATAGGTGCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491856.1
CDS CCA 72 bp GCACAATCAGCTTTTGGTACCGCATATCATGCAGGGTaGTCAGGGTGCTGTCCTCTCATAATTGAAGTGGTT +
Preference number: 6 (lower is better)
Translates to: AQSAFGTAYHAG*SGCCPLIIEVV
Trigger: AACCACTTCAATTATGAGAGGACAGCACCCTGACCACCCTGCATGATATGCGGTACCAAAAGCTGATTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495789.6
CDS TCA 72 bp GAGCAGGCTTTGTGCACGAGACATGAGCTTACTTTTTaGGGTGGATCATTAGGTACCGGAGGGTTTCATAGT +
Preference number: 6 (lower is better)
Translates to: EQALCTRHELTF*GGSLGTGGFHS
Trigger: ACTATGAAACCCTCCGGTACCTAATGATCCACCTCAAAAAGTAAGCTCATGTCTCGTGCACAAAGCCTGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433720.1
CDS TCA 72 bp GTAAATACAGCTGCTCCTCCCACAGGACTGGAGATTTaGTCAACCAGTATTTCATGGAAAGTGGGGCAAGCT +
Preference number: 6 (lower is better)
Translates to: VNTAAPPTGLEI*STSISWKVGQA
Trigger: AGCTTGCCCCACTTTCCATGAAATACTGGTTGATCAAATCTCCAGTCCTGTGGGAGGAGCAGCTGTATTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491856.1
CDS GCA 72 bp CATCAGCACTTCATGGACGGCTTCCAGCCTCTCATCTaGATTGGAGATTTCTCTGTCAAATGCCATTTTGAC +
Preference number: 6 (lower is better)
Translates to: HQHFMDGFQPLI*IGDFSVKCHFD
Trigger: GTCAAAATGGCATTTGACAGAGAAATCTCCAATGCAGATGAGAGGCTGGAAGCCGTCCATGAAGTGCTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424025.4
CDS CCA 72 bp GCAAATAAGCACCACGTTTCTCAAAAACAAATGCGTTaGTGCGGGTTGGTAGGCACCTCCTTAGCTTTCTCA +
Preference number: 6 (lower is better)
Translates to: ANKHHVSQKQMR*CGLVGTSLAFS
Trigger: TGAGAAAGCTAAGGAGGTGCCTACCAACCCGCACCAACGCATTTGTTTTTGAGAAACGTGGTGCTTATTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409922.5
CDS CAA 72 bp CTCTTGAGATCAGGTTGGCAGTCATTGGGAACGTGCTaGGAACACTGTTTGTGTACGTTCAATCCACAGTCT +
Preference number: 6 (lower is better)
Translates to: LLRSGWQSLGTC*EHCLCTFNPQS
Trigger: AGACTGTGGATTGAACGTACACAAACAGTGTTCCAAGCACGTTCCCAATGACTGCCAACCTGATCTCAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000410098.1
ENST00000412711.6
ENST00000439711.6
ENST00000446446.5
ENST00000467441.5
ENST00000493906.5
CDS CAA 72 bp GTTGTGAGGTCACAACAGTACACTTTCTTGATCCTCTaGAGATCAGGTTGGCAGTCATTGGGAACGTGCTTG +
Preference number: 6 (lower is better)
Translates to: VVRSQQYTFLIL*RSGWQSLGTCL
Trigger: CAAGCACGTTCCCAATGACTGCCAACCTGATCTCAAGAGGATCAAGAAAGTGTACTGTTGTGACCTCACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000410098.1
ENST00000412711.6
ENST00000439711.6
ENST00000446446.5
ENST00000467441.5
ENST00000493906.5
CDS CAA 72 bp AGTAAATACAGCTGCTCCTCCCACAGGACTGGAGATTaGATCAACCAGTATTTCATGGAAAGTGGGGCAAGC +
Preference number: 6 (lower is better)
Translates to: SKYSCSSHRTGD*INQYFMESGAS
Trigger: GCTTGCCCCACTTTCCATGAAATACTGGTTGATCAAATCTCCAGTCCTGTGGGAGGAGCAGCTGTATTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491856.1
CDS TCA 72 bp AATATTTTGGTCTGTTTTCCACCTCCCGAGGACAAATaGTTCTCTTGGGACGAGGTGCCTCTTGCTGTAACT +
Preference number: 6 (lower is better)
Translates to: NILVCFPPPEDK*FSWDEVPLAVT
Trigger: AGTTACAGCAAGAGGCACCTCGTCCCAAGAGAATCATTTGTCCTCGGGAGGTGGAAAACAGACCAAAATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000222792.11
ENST00000409350.5
ENST00000409922.5
ENST00000409964.6
ENST00000412536.5
ENST00000439384.5
ENST00000474070.5
ENST00000495789.6
CDS TCA 72 bp AGCCATTGGTACTGCTTTTACAGTGCACAGTGCAACTaGGGCAAACCATCTCCACTGTTCACAATGTTGACA +
Preference number: 6 (lower is better)
Translates to: SHWYCFYSAQCN*GKPSPLFTMLT
Trigger: TGTCAACATTGTGAACAGTGGAGATGGTTTGCCTCAGTTGCACTGTGCACTGTAAAAGCAGTACCAATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483081.1
CDS TCA 72 bp TGTGTTTCAAAATCGCTTCTTAAAGGTGTACGGCAGTaGTGGCCTGGAAGAAAAAGGCTTTCTGGCTTCCCA +
Preference number: 6 (lower is better)
Translates to: CVSKSLLKGVRQ*WPGRKRLSGFP
Trigger: TGGGAAGCCAGAAAGCCTTTTTCTTCCAGGCCATCACTGCCGTACACCTTTAAGAAGCGATTTTGAAACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491856.1
CDS GCA 72 bp AACACAAGTATTCAAGCAGGCAAACAAAAGGAAGGATaGCCAGTCCACCTGGCTTTCTGCTATTGTCTTTGC +
Preference number: 6 (lower is better)
Translates to: NTSIQAGKQKEG*PVHLAFCYCLC
Trigger: GCAAAGACAATAGCAGAAAGCCAGGTGGACTGGGCATCCTTCCTTTTGTTTGCCTGCTTGAATACTTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491856.1
CDS CCA 72 bp CAACAGTACACTTTCTTGATCCTCTTGAGATCAGGTTaGCAGTCATTGGGAACGTGCTTGGAACACTGTTTG +
Preference number: 6 (lower is better)
Translates to: QQYTFLILLRSG*QSLGTCLEHCL
Trigger: CAAACAGTGTTCCAAGCACGTTCCCAATGACTGCCAACCTGATCTCAAGAGGATCAAGAAAGTGTACTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000410098.1
ENST00000412711.6
ENST00000439711.6
ENST00000446446.5
ENST00000467441.5
ENST00000493906.5
CDS CAA 72 bp ACTTTCTTGATCCTCTTGAGATCAGGTTGGCAGTCATaGGGAACGTGCTTGGAACACTGTTTGTGTACGTTC +
Preference number: 6 (lower is better)
Translates to: TFLILLRSGWQS*GTCLEHCLCTF
Trigger: GAACGTACACAAACAGTGTTCCAAGCACGTTCCCAATGACTGCCAACCTGATCTCAAGAGGATCAAGAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000410098.1
ENST00000412711.6
ENST00000439711.6
ENST00000446446.5
ENST00000467441.5
ENST00000493906.5
CDS CAA 72 bp ACAACAGTACACTTTCTTGATCCTCTTGAGATCAGGTaGGCAGTCATTGGGAACGTGCTTGGAACACTGTTT +
Preference number: 6 (lower is better)
Translates to: TTVHFLDPLEIR*AVIGNVLGTLF
Trigger: AAACAGTGTTCCAAGCACGTTCCCAATGACTGCCAACCTGATCTCAAGAGGATCAAGAAAGTGTACTGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000410098.1
ENST00000412711.6
ENST00000439711.6
ENST00000446446.5
ENST00000467441.5
ENST00000493906.5
CDS CAA 72 bp TTCACAAGTGTTGTGAGGTCACAACAGTACACTTTCTaGATCCTCTTGAGATCAGGTTGGCAGTCATTGGGA +
Preference number: 6 (lower is better)
Translates to: FTSVVRSQQYTF*ILLRSGWQSLG
Trigger: TCCCAATGACTGCCAACCTGATCTCAAGAGGATCAAGAAAGTGTACTGTTGTGACCTCACAACACTTGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000222792.11
ENST00000409041.7
ENST00000410098.1
ENST00000412711.6
ENST00000439711.6
ENST00000446446.5
ENST00000467441.5
ENST00000493906.5
CDS CAA 72 bp CACCACGTTTCTCAAAAACAAATGCGTTGGTGCGGGTaGGTAGGCACCTCCTTAGCTTTCTCAAAAATTGTA +
Preference number: 6 (lower is better)
Translates to: HHVSQKQMRWCG*VGTSLAFSKIV
Trigger: TACAATTTTTGAGAAAGCTAAGGAGGTGCCTACCAACCCGCACCAACGCATTTGTTTTTGAGAAACGTGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409922.5
CDS CAA 90 bp GCAAATAAGCACCACGTTTCTCAAAAACAAATGCGTTGGTGCGGGTaGGTAGGCACCTCCTTAGCTTTCTCAAAAATTGTATTGTTCCTC +
Preference number: 6 (lower is better)
Translates to: ANKHHVSQKQMRWCG*VGTSLAFSKIVLFL
Trigger: GAGGAACAATACAATTTTTGAGAAAGCTAAGGAGGTGCCTACCAACCCGCACCAACGCATTTGTTTTTGAGAAACGTGGTGCTTATTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409922.5
CDS TCA 72 bp CCCATGAAACCTGAAGGTACAAGACCATCAATGCTCTaGACAGACCACATACAGAATAAGGACCACAAAGAA +
Preference number: 6 (lower is better)
Translates to: PMKPEGTRPSML*TDHIQNKDHKE
Trigger: TTCTTTGTGGTCCTTATTCTGTATGTGGTCTGTTCAGAGCATTGATGGTCTTGTACCTTCAGGTTTCATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491856.1
CDS CAA 72 bp GAACTATGTGTTATCCTAATTGCAAGTGGACATTTATaGATTAGCAACCTGCTTGCTTCAGGTGCAGGGTGG +
Preference number: 6 (lower is better)
Translates to: ELCVILIASGHL*ISNLLASGAGW
Trigger: CCACCCTGCACCTGAAGCAAGCAGGTTGCTAATCAATAAATGTCCACTTGCAATTAGGATAACACATAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491856.1
CDS TCA 72 bp AGTGGAAACAGCCAGTTAAGAGGTTATTGTAATCCGTaGCAGATATATTTTCTTCCCCAAGACCATCTCCAG +
Preference number: 6 (lower is better)
Translates to: SGNSQLRGYCNP*QIYFLPQDHLQ
Trigger: CTGGAGATGGTCTTGGGGAAGAAAATATATCTGTCACGGATTACAATAACCTCTTAACTGGCTGTTTCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409964.6