RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHMP6 (Homo sapiens)

Ensembl gene IDs: ENSG00000176108

Ensembl transcript IDs: ENST00000325167.9, ENST00000571457.1, ENST00000572525.5, ENST00000572778.5

Found 210 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGTGTCTTCCTCACAGACGAGCGCGAGCCACGCGGGGCTGGGACTaGAGGGGAACAGCACCAGAGGCGTTGGGCCTGGGCCTCGGCCAC +
Preference number: 1 (lower is better)
Translates to: RCLPHRRARATRGWD*RGTAPEALGLGLGH
Trigger: GTGGCCGAGGCCCAGGCCCAACGCCTCTGGTGCTGTTCCCCTGCAGTCCCAGCCCCGCGTGGCTCGCGCTCGTCTGTGAGGAAGACACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR GCA 90 bp TGTGCACGAGAAGTCACGCCATGCCCCACAGCCTCCAGTCCTGGCTaGTGGTGGCTCGGGGACCCGCAGGGCAGGAGGGTCCCGGGTCTC +
Preference number: 1 (lower is better)
Translates to: CAREVTPCPTASSPG*WWLGDPQGRRVPGL
Trigger: GAGACCCGGGACCCTCCTGCCCTGCGGGTCCCCGAGCCACCAGCAGCCAGGACTGGAGGCTGTGGGGCATGGCGTGACTTCTCGTGCACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR GCA 90 bp GACGCTCTGGAGTCCTCCTGCAATGCGCCTGCGTGGCTGCAGCTCTaGTCAGCACCGTGCGCACTGGGCTCCAGGGAACCCGGTCAGGGG +
Preference number: 1 (lower is better)
Translates to: DALESSCNAPAWLQL*SAPCALGSREPGQG
Trigger: CCCCTGACCGGGTTCCCTGGAGCCCAGTGCGCACGGTGCTGAGCAGAGCTGCAGCCACGCAGGCGCATTGCAGGAGGACTCCAGAGCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR CCA 90 bp GTCTGGAGGTGTCTTCCTCACAGACGAGCGCGAGCCACGCGGGGCTaGGACTGCAGGGGAACAGCACCAGAGGCGTTGGGCCTGGGCCTC +
Preference number: 1 (lower is better)
Translates to: VWRCLPHRRARATRG*DCRGTAPEALGLGL
Trigger: GAGGCCCAGGCCCAACGCCTCTGGTGCTGTTCCCCTGCAGTCCCAGCCCCGCGTGGCTCGCGCTCGTCTGTGAGGAAGACACCTCCAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR GCA 90 bp CTCCAGGAGACGCTCTGGAGTCCTCCTGCAATGCGCCTGCGTGGCTaGAGCTCTGCTCAGCACCGTGCGCACTGGGCTCCAGGGAACCCG +
Preference number: 1 (lower is better)
Translates to: LQETLWSPPAMRLRG*SSAQHRAHWAPGNP
Trigger: CGGGTTCCCTGGAGCCCAGTGCGCACGGTGCTGAGCAGAGCTGCAGCCACGCAGGCGCATTGCAGGAGGACTCCAGAGCGTCTCCTGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR CCA 90 bp TGCAGGGCCAACTTTAATACGGGCCGGCCTGTCTGGGGGTCGAGGTaGCCGCTCCCTTTGTCCTTGTGGCTTTCCACGGGCAGGGGCGGT +
Preference number: 1 (lower is better)
Translates to: CRANFNTGRPVWGSR*PLPLSLWLSTGRGG
Trigger: ACCGCCCCTGCCCGTGGAAAGCCACAAGGACAAAGGGAGCGGCCACCTCGACCCCCAGACAGGCCGGCCCGTATTAAAGTTGGCCCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR TCA 90 bp CGGAGCAGCGTCTCCCAAGCATCGGAGGTCCTTTCTCAGCAGGGCTaGGCCCTAGTGGACAGAGCCGTGAGTGGCAAGGCGGGAGTCAGG +
Preference number: 1 (lower is better)
Translates to: RSSVSQASEVLSQQG*ALVDRAVSGKAGVR
Trigger: CCTGACTCCCGCCTTGCCACTCACGGCTCTGTCCACTAGGGCTCAGCCCTGCTGAGAAAGGACCTCCGATGCTTGGGAGACGCTGCTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR CCA 90 bp GTGGCGCCTGAGTGCGTTCAGGCTCAAGGTCTCCAGGAGACGCTCTaGAGTCCTCCTGCAATGCGCCTGCGTGGCTGCAGCTCTGCTCAG +
Preference number: 1 (lower is better)
Translates to: VAPECVQAQGLQETL*SPPAMRLRGCSSAQ
Trigger: CTGAGCAGAGCTGCAGCCACGCAGGCGCATTGCAGGAGGACTCCAGAGCGTCTCCTGGAGACCTTGAGCCTGAACGCACTCAGGCGCCAC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR CCA 90 bp CAATTCAGCAAGAAAGCCCCTGGCCCGCCACCTTCAAACTGGAGGTaGGTGTCTAGGGTGCGGAGGCAGAGGCACAGAGAGGTTCAGCAC +
Preference number: 1 (lower is better)
Translates to: QFSKKAPGPPPSNWR*VSRVRRQRHREVQH
Trigger: GTGCTGAACCTCTCTGTGCCTCTGCCTCCGCACCCTAGACACCCACCTCCAGTTTGAAGGTGGCGGGCCAGGGGCTTTCTTGCTGAATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR CCA 90 bp AGTCGTCAATTCAGCAAGAAAGCCCCTGGCCCGCCACCTTCAAACTaGAGGTGGGTGTCTAGGGTGCGGAGGCAGAGGCACAGAGAGGTT +
Preference number: 1 (lower is better)
Translates to: SRQFSKKAPGPPPSN*RWVSRVRRQRHREV
Trigger: AACCTCTCTGTGCCTCTGCCTCCGCACCCTAGACACCCACCTCCAGTTTGAAGGTGGCGGGCCAGGGGCTTTCTTGCTGAATTGACGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR-3UTR CCA 90 bp CAGCCTCCAGTCCTGGCTGCTGGTGGCTCGGGGACCCGCAGGGCAGGAGGGTCCCAGCACCGTGCGCACTaGGCTCCAGGGAACCCGGTC +
Preference number: 2 (lower is better)
Translates to: QPPVLAAGGSGTRRAGGSQHRAH*APGNPV
Trigger: GACCGGGTTCCCTGGAGCCCAGTGCGCACGGTGCTG...GGACCCTCCTGCCCTGCGGGTCCCCGAGCCACCAGCAGCCAGGACTGGAGGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR-3UTR TCA 90 bp TGGCCGCTCCCTTTGTCCTTGTGGCTTTCCACGGGCAGGGGCGGTCCCAGCGAGGGTCTCGCAGTTCCATaGGCCCCAGCCGCGGGGACC +
Preference number: 2 (lower is better)
Translates to: WPLPLSLWLSTGRGGPSEGLAVP*APAAGT
Trigger: GGTCCCCGCGGCTGGGGCTCATGGAACTGCGAGACC...CTCGCTGGGACCGCCCCTGCCCGTGGAAAGCCACAAGGACAAAGGGAGCGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR-3UTR GCA 90 bp GGGGCTGGGACTGCAGGGGAACAGCACCAGAGGCGTTGGGCCTGGGCCTCGGCCCTCTGCTCAGCACCGTaGGCACTGGGCTCCAGGGAA +
Preference number: 2 (lower is better)
Translates to: GAGTAGEQHQRRWAWASALCSAP*ALGSRE
Trigger: TTCCCTGGAGCCCAGTGCGCACGGTGCTGAGCAGAG...GGCCGAGGCCCAGGCCCAACGCCTCTGGTGCTGTTCCCCTGCAGTCCCAGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR-3UTR GCA 90 bp TGGCCGCTCCCTTTGTCCTTGTGGCTTTCCACGGGCAGGGGCGGTCCCAGCGAGGCCTCCAGTCCTGGCTaGTGGTGGCTCGGGGACCCG +
Preference number: 2 (lower is better)
Translates to: WPLPLSLWLSTGRGGPSEASSPG*WWLGDP
Trigger: CGGGTCCCCGAGCCACCAGCAGCCAGGACTGGAGGC...CTCGCTGGGACCGCCCCTGCCCGTGGAAAGCCACAAGGACAAAGGGAGCGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR-3UTR CCA 90 bp CTGGAGGTGTCTTCCTCACAGACGAGCGCGAGCCACGCGGGGCTGGGACTGCAGCAGCACCAGAGGCGTTaGGCCTGGGCCTCGGCCACC +
Preference number: 2 (lower is better)
Translates to: LEVSSSQTSASHAGLGLQQHQRR*AWASAT
Trigger: GGTGGCCGAGGCCCAGGCCCAACGCCTCTGGTGCTG...CTGCAGTCCCAGCCCCGCGTGGCTCGCGCTCGTCTGTGAGGAAGACACCTCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR CAA 90 bp ACGGGCCGGCCTGTCTGGGGGTCGAGGTGGCCGCTCCCTTTGTCCTaGTGGCTTTCCACGGGCAGGGGCGGTCCCAGCGAGATCGTCTCA +
Preference number: 2 (lower is better)
Translates to: TGRPVWGSRWPLPLS*WLSTGRGGPSEIVS
Trigger: TGAGACGATCTCGCTGGGACCGCCCCTGCCCGTGGAAAGCCACAAGGACAAAGGGAGCGGCCACCTCGACCCCCAGACAGGCCGGCCCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR-3UTR TCA 90 bp GGTCTCCAGGAGACGCTCTGGAGTCCTCCTGCAATGCGCCTGCGTGGCTGCAGCCCTGGGGCATCCCCGTaGGTCCCACAAGACGAGGCC +
Preference number: 2 (lower is better)
Translates to: GLQETLWSPPAMRLRGCSPGASP*VPQDEA
Trigger: GGCCTCGTCTTGTGGGACTCACGGGGATGCCCCAGG...GCTGCAGCCACGCAGGCGCATTGCAGGAGGACTCCAGAGCGTCTCCTGGAGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR-3UTR TCA 90 bp CACAGCCTCCAGTCCTGGCTGCTGGTGGCTCGGGGACCCGCAGGGCAGGAGGGTAGAGTTAATCCGGACTaGGAGCAGGCCAGTGGCGCC +
Preference number: 2 (lower is better)
Translates to: HSLQSWLLVARGPAGQEGRVNPD*EQASGA
Trigger: GGCGCCACTGGCCTGCTCTCAGTCCGGATTAACTCT...ACCCTCCTGCCCTGCGGGTCCCCGAGCCACCAGCAGCCAGGACTGGAGGCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR-3UTR GCA 90 bp ACCAGCAGGGAAGCTGAGGTGCGCCGGGAAGCCAGGCCAAGGGAGGGACCCCTTGCGTGGCTGCAGCTCTaGTCAGCACCGTGCGCACTG +
Preference number: 2 (lower is better)
Translates to: TSREAEVRREARPREGPLAWLQL*SAPCAL
Trigger: CAGTGCGCACGGTGCTGAGCAGAGCTGCAGCCACGC...AAGGGGTCCCTCCCTTGGCCTGGCTTCCCGGCGCACCTCAGCTTCCCTGCTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR-3UTR CCA 90 bp CACAGCCTCCAGTCCTGGCTGCTGGTGGCTCGGGGACCCGCAGGGCAGGAGGGTTGCAATGCGCCTGCGTaGCTGCAGCTCTGCTCAGCA +
Preference number: 2 (lower is better)
Translates to: HSLQSWLLVARGPAGQEGCNAPA*LQLCSA
Trigger: TGCTGAGCAGAGCTGCAGCCACGCAGGCGCATTGCA...ACCCTCCTGCCCTGCGGGTCCCCGAGCCACCAGCAGCCAGGACTGGAGGCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR-3UTR CCA 90 bp GGAGCAAGAGGAAGCGCGGGGACCCCAAGGTCTGGAGGTGTCTTCCTCACAGACCAGAGGCGTTGGGCCTaGGCCTCGGCCACCGGGGGA +
Preference number: 2 (lower is better)
Translates to: GARGSAGTPRSGGVFLTDQRRWA*ASATGG
Trigger: TCCCCCGGTGGCCGAGGCCCAGGCCCAACGCCTCTG...GTCTGTGAGGAAGACACCTCCAGACCTTGGGGTCCCCGCGCTTCCTCTTGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR-3UTR TCA 90 bp AAGGTCTGGAGGTGTCTTCCTCACAGACGAGCGCGAGCCACGCGGGGCTGGGACGTCAGGGGCTGGCCGTaGCCCAAACTCTCTGTGGGC +
Preference number: 2 (lower is better)
Translates to: KVWRCLPHRRARATRGWDVRGWP*PKLSVG
Trigger: GCCCACAGAGAGTTTGGGTCACGGCCAGCCCCTGAC...GTCCCAGCCCCGCGTGGCTCGCGCTCGTCTGTGAGGAAGACACCTCCAGACCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR-3UTR GCA 90 bp CTGGAGGTGTCTTCCTCACAGACGAGCGCGAGCCACGCGGGGCTGGGACTGCAGCTCCTGCAATGCGCCTaGGTGGCTGCAGCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: LEVSSSQTSASHAGLGLQLLQCA*VAAALL
Trigger: GAGCAGAGCTGCAGCCACGCAGGCGCATTGCAGGAG...CTGCAGTCCCAGCCCCGCGTGGCTCGCGCTCGTCTGTGAGGAAGACACCTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR-3UTR GCA 90 bp TGGCCGCTCCCTTTGTCCTTGTGGCTTTCCACGGGCAGGGGCGGTCCCAGCGAGGGAGTCCTCCTGCAATaGGCCTGCGTGGCTGCAGCT +
Preference number: 2 (lower is better)
Translates to: WPLPLSLWLSTGRGGPSEGVLLQ*ACVAAA
Trigger: AGCTGCAGCCACGCAGGCGCATTGCAGGAGGACTCC...CTCGCTGGGACCGCCCCTGCCCGTGGAAAGCCACAAGGACAAAGGGAGCGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR-3UTR CCA 90 bp CAGCGAGGAGCAAGAGGAAGCGCGGGGACCCCAAGGTCTGGAGGTGTCTTCCTCCGAGCCACGCGGGGCTaGGACTGCAGGGGAACAGCA +
Preference number: 2 (lower is better)
Translates to: QRGARGSAGTPRSGGVFLRATRG*DCRGTA
Trigger: TGCTGTTCCCCTGCAGTCCCAGCCCCGCGTGGCTCG...GAGGAAGACACCTCCAGACCTTGGGGTCCCCGCGCTTCCTCTTGCTCCTCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR-3UTR GCA 90 bp CGCTCCCTTTGTCCTTGTGGCTTTCCACGGGCAGGGGCGGTCCCAGCGAGATCGATGCGCCTGCGTGGCTaGAGCTCTGCTCAGCACCGT +
Preference number: 2 (lower is better)
Translates to: RSLCPCGFPRAGAVPARSMRLRG*SSAQHR
Trigger: ACGGTGCTGAGCAGAGCTGCAGCCACGCAGGCGCAT...CGATCTCGCTGGGACCGCCCCTGCCCGTGGAAAGCCACAAGGACAAAGGGAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR-3UTR GCA 90 bp CAGCGAGGAGCAAGAGGAAGCGCGGGGACCCCAAGGTCTGGAGGTGTCTTCCTCACGCGGGGCTGGGACTaGAGGGGAACAGCACCAGAG +
Preference number: 2 (lower is better)
Translates to: QRGARGSAGTPRSGGVFLTRGWD*RGTAPE
Trigger: CTCTGGTGCTGTTCCCCTGCAGTCCCAGCCCCGCGT...GAGGAAGACACCTCCAGACCTTGGGGTCCCCGCGCTTCCTCTTGCTCCTCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR-3UTR CCA 90 bp GGAGTCAGGGCTCTCGGAGTCGTCAATTCAGCAAGAAAGCCCCTGGCCCGCCACGTGGGCCACAGTCCCTaGGGCATCCCCGTGAGTCCC +
Preference number: 2 (lower is better)
Translates to: GVRALGVVNSARKPLARHVGHSP*GIPVSP
Trigger: GGGACTCACGGGGATGCCCCAGGGACTGTGGCCCAC...GTGGCGGGCCAGGGGCTTTCTTGCTGAATTGACGACTCCGAGAGCCCTGACTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR-3UTR CCA 90 bp CTGGAGGTGTCTTCCTCACAGACGAGCGCGAGCCACGCGGGGCTGGGACTGCAGCTCCAGGAGACGCTCTaGAGTCCTCCTGCAATGCGC +
Preference number: 2 (lower is better)
Translates to: LEVSSSQTSASHAGLGLQLQETL*SPPAMR
Trigger: GCGCATTGCAGGAGGACTCCAGAGCGTCTCCTGGAG...CTGCAGTCCCAGCCCCGCGTGGCTCGCGCTCGTCTGTGAGGAAGACACCTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR-3UTR CCA 90 bp CGGGGCTGCACCTGCCGGAGCAGCGTCTCCCAAGCATCGGAGGTCCTTTCTCAGCTGAGAGCAGGCCAGTaGCGCCTGAGTGCGTTCAGG +
Preference number: 2 (lower is better)
Translates to: RGCTCRSSVSQASEVLSQLRAGQ*RLSAFR
Trigger: CCTGAACGCACTCAGGCGCCACTGGCCTGCTCTCAG...CTGAGAAAGGACCTCCGATGCTTGGGAGACGCTGCTCCGGCAGGTGCAGCCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR-3UTR TCA 90 bp GTCAGGGCTCTCGGAGTCGTCAATTCAGCAAGAAAGCCCCTGGCCCGCCACCTTCAGGCCAGTGGCGCCTaGGTGCGTTCAGGCTCAAGG +
Preference number: 2 (lower is better)
Translates to: VRALGVVNSARKPLARHLQASGA*VRSGSR
Trigger: CCTTGAGCCTGAACGCACTCAGGCGCCACTGGCCTG...AAGGTGGCGGGCCAGGGGCTTTCTTGCTGAATTGACGACTCCGAGAGCCCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR-3UTR GCA 90 bp TGGCCGCTCCCTTTGTCCTTGTGGCTTTCCACGGGCAGGGGCGGTCCCAGCGAGACCAAACCAGCCCTGTaGACGAGAAGTCACGCCATG +
Preference number: 2 (lower is better)
Translates to: WPLPLSLWLSTGRGGPSETKPAL*TRSHAM
Trigger: CATGGCGTGACTTCTCGTGCACAGGGCTGGTTTGGT...CTCGCTGGGACCGCCCCTGCCCGTGGAAAGCCACAAGGACAAAGGGAGCGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR-3UTR CCA 90 bp CAGGGGCGGTCCCAGCGAGATCGTCTCATAACCAAACCAGCCCTGTGCACGAGAGGACAGAGCCGTGAGTaGCAAGGCGGGAGTCAGGGC +
Preference number: 2 (lower is better)
Translates to: QGRSQRDRLITKPALCTRGQSRE*QGGSQG
Trigger: GCCCTGACTCCCGCCTTGCCACTCACGGCTCTGTCC...TCTCGTGCACAGGGCTGGTTTGGTTATGAGACGATCTCGCTGGGACCGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR-3UTR CCA 90 bp TGTGGCTTTCCACGGGCAGGGGCGGTCCCAGCGAGATCGTCTCATAACCAAACCCACAGCCTCCAGTCCTaGCTGCTGGTGGCTCGGGGA +
Preference number: 2 (lower is better)
Translates to: CGFPRAGAVPARSSHNQTHSLQS*LLVARG
Trigger: TCCCCGAGCCACCAGCAGCCAGGACTGGAGGCTGTG...GGTTTGGTTATGAGACGATCTCGCTGGGACCGCCCCTGCCCGTGGAAAGCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR-3UTR GCA 90 bp CAGGGGCGGTCCCAGCGAGATCGTCTCATAACCAAACCAGCCCTGTGCACGAGAGCTCTGGAGTCCTCCTaGAATGCGCCTGCGTGGCTG +
Preference number: 2 (lower is better)
Translates to: QGRSQRDRLITKPALCTRALESS*NAPAWL
Trigger: CAGCCACGCAGGCGCATTGCAGGAGGACTCCAGAGC...TCTCGTGCACAGGGCTGGTTTGGTTATGAGACGATCTCGCTGGGACCGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR-3UTR GCA 90 bp GGAGCAAGAGGAAGCGCGGGGACCCCAAGGTCTGGAGGTGTCTTCCTCACAGACCCAGTGGCGCCTGAGTaGGTTCAGGCTCAAGGTCTC +
Preference number: 2 (lower is better)
Translates to: GARGSAGTPRSGGVFLTDPVAPE*VQAQGL
Trigger: GAGACCTTGAGCCTGAACGCACTCAGGCGCCACTGG...GTCTGTGAGGAAGACACCTCCAGACCTTGGGGTCCCCGCGCTTCCTCTTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR-3UTR GCA 90 bp TGTGGCTTTCCACGGGCAGGGGCGGTCCCAGCGAGATCGTCTCATAACCAAACCGAGAGGTTCAGCACATaGTGGTCTCCTGGGGATCCC +
Preference number: 2 (lower is better)
Translates to: CGFPRAGAVPARSSHNQTERFST*WSPGDP
Trigger: GGGATCCCCAGGAGACCAGCATGTGCTGAACCTCTC...GGTTTGGTTATGAGACGATCTCGCTGGGACCGCCCCTGCCCGTGGAAAGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR-3UTR CCA 90 bp GCGAGGAGCAAGAGGAAGCGCGGGGACCCCAAGGTCTGGAGGTGTCTTCCTCACACAACCGGCAGAAGCTaGGCTCGGTCGAGAGTTAAT +
Preference number: 2 (lower is better)
Translates to: ARSKRKRGDPKVWRCLPHTTGRS*ARSRVN
Trigger: ATTAACTCTCGACCGAGCCCAGCTTCTGCCGGTTGT...GTGAGGAAGACACCTCCAGACCTTGGGGTCCCCGCGCTTCCTCTTGCTCCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR GCA 72 bp CCTCACAGACGAGCGCGAGCCACGCGGGGCTGGGACTaGAGGGGAACAGCACCAGAGGCGTTGGGCCTGGGC +
Preference number: 3 (lower is better)
Translates to: PHRRARATRGWD*RGTAPEALGLG
Trigger: GCCCAGGCCCAACGCCTCTGGTGCTGTTCCCCTGCAGTCCCAGCCCCGCGTGGCTCGCGCTCGTCTGTGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR GCA 72 bp GAGTCCTCCTGCAATGCGCCTGCGTGGCTGCAGCTCTaGTCAGCACCGTGCGCACTGGGCTCCAGGGAACCC +
Preference number: 3 (lower is better)
Translates to: ESSCNAPAWLQL*SAPCALGSREP
Trigger: GGGTTCCCTGGAGCCCAGTGCGCACGGTGCTGAGCAGAGCTGCAGCCACGCAGGCGCATTGCAGGAGGACTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR CCA 72 bp TGTCTTCCTCACAGACGAGCGCGAGCCACGCGGGGCTaGGACTGCAGGGGAACAGCACCAGAGGCGTTGGGC +
Preference number: 3 (lower is better)
Translates to: CLPHRRARATRG*DCRGTAPEALG
Trigger: GCCCAACGCCTCTGGTGCTGTTCCCCTGCAGTCCCAGCCCCGCGTGGCTCGCGCTCGTCTGTGAGGAAGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR CCA 72 bp GTCTGGGGGTCGAGGTGGCCGCTCCCTTTGTCCTTGTaGCTTTCCACGGGCAGGGGCGGTCCCAGCGAGATC +
Preference number: 3 (lower is better)
Translates to: VWGSRWPLPLSL*LSTGRGGPSEI
Trigger: GATCTCGCTGGGACCGCCCCTGCCCGTGGAAAGCCACAAGGACAAAGGGAGCGGCCACCTCGACCCCCAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR GCA 72 bp ACGCTCTGGAGTCCTCCTGCAATGCGCCTGCGTGGCTaGAGCTCTGCTCAGCACCGTGCGCACTGGGCTCCA +
Preference number: 3 (lower is better)
Translates to: TLWSPPAMRLRG*SSAQHRAHWAP
Trigger: TGGAGCCCAGTGCGCACGGTGCTGAGCAGAGCTGCAGCCACGCAGGCGCATTGCAGGAGGACTCCAGAGCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR CCA 72 bp GCGTGCAGGGCCAACTTTAATACGGGCCGGCCTGTCTaGGGGTCGAGGTGGCCGCTCCCTTTGTCCTTGTGG +
Preference number: 3 (lower is better)
Translates to: ACRANFNTGRPV*GSRWPLPLSLW
Trigger: CCACAAGGACAAAGGGAGCGGCCACCTCGACCCCCAGACAGGCCGGCCCGTATTAAAGTTGGCCCTGCACGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR GCA 72 bp AAGGTCTCCAGGAGACGCTCTGGAGTCCTCCTGCAATaGGCCTGCGTGGCTGCAGCTCTGCTCAGCACCGTG +
Preference number: 3 (lower is better)
Translates to: KVSRRRSGVLLQ*ACVAAALLSTV
Trigger: CACGGTGCTGAGCAGAGCTGCAGCCACGCAGGCGCATTGCAGGAGGACTCCAGAGCGTCTCCTGGAGACCTT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR CCA 72 bp TCAGCAGGGCTGAGCCCTAGTGGACAGAGCCGTGAGTaGCAAGGCGGGAGTCAGGGCTCTCGGAGTCGTCAA +
Preference number: 3 (lower is better)
Translates to: SAGLSPSGQSRE*QGGSQGSRSRQ
Trigger: TTGACGACTCCGAGAGCCCTGACTCCCGCCTTGCCACTCACGGCTCTGTCCACTAGGGCTCAGCCCTGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR TCA 72 bp GTCTCCCAAGCATCGGAGGTCCTTTCTCAGCAGGGCTaGGCCCTAGTGGACAGAGCCGTGAGTGGCAAGGCG +
Preference number: 3 (lower is better)
Translates to: VSQASEVLSQQG*ALVDRAVSGKA
Trigger: CGCCTTGCCACTCACGGCTCTGTCCACTAGGGCTCAGCCCTGCTGAGAAAGGACCTCCGATGCTTGGGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR CCA 72 bp AAGAAAGCCCCTGGCCCGCCACCTTCAAACTGGAGGTaGGTGTCTAGGGTGCGGAGGCAGAGGCACAGAGAG +
Preference number: 3 (lower is better)
Translates to: KKAPGPPPSNWR*VSRVRRQRHRE
Trigger: CTCTCTGTGCCTCTGCCTCCGCACCCTAGACACCCACCTCCAGTTTGAAGGTGGCGGGCCAGGGGCTTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR CCA 72 bp TTCAGCAAGAAAGCCCCTGGCCCGCCACCTTCAAACTaGAGGTGGGTGTCTAGGGTGCGGAGGCAGAGGCAC +
Preference number: 3 (lower is better)
Translates to: FSKKAPGPPPSN*RWVSRVRRQRH
Trigger: GTGCCTCTGCCTCCGCACCCTAGACACCCACCTCCAGTTTGAAGGTGGCGGGCCAGGGGCTTTCTTGCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR CCA 72 bp AACTTTAATACGGGCCGGCCTGTCTGGGGGTCGAGGTaGCCGCTCCCTTTGTCCTTGTGGCTTTCCACGGGC +
Preference number: 3 (lower is better)
Translates to: NFNTGRPVWGSR*PLPLSLWLSTG
Trigger: GCCCGTGGAAAGCCACAAGGACAAAGGGAGCGGCCACCTCGACCCCCAGACAGGCCGGCCCGTATTAAAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR TCA 90 bp CAGCCTCCAGTCCTGGCTGCTGGTGGCTCGGGGACCCGCAGGGCAGGAGGGTCCCACCAGCAGGGAAGCTaGGGTGCGCCGGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: QPPVLAAGGSGTRRAGGSHQQGS*GAPGSQ
Trigger: CTGGCTTCCCGGCGCACCTCAGCTTCCCTGCTGGTG...GGACCCTCCTGCCCTGCGGGTCCCCGAGCCACCAGCAGCCAGGACTGGAGGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CCA 90 bp CAGCTCTGCTCAGCACCGTGCGCACTGGGCTCCAGGGAACCCGGTCAGGGGCTGCAGAGGCGTTGGGCCTaGGCCTCGGCCACCGGGGGA +
Preference number: 4 (lower is better)
Translates to: QLCSAPCALGSREPGQGLQRRWA*ASATGG
Trigger: TCCCCCGGTGGCCGAGGCCCAGGCCCAACGCCTCTG...CAGCCCCTGACCGGGTTCCCTGGAGCCCAGTGCGCACGGTGCTGAGCAGAGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp GGGGCTGGGACTGCAGGGGAACAGCACCAGAGGCGTTGGGCCTGGGCCTCGGCCACGCGGGGCTGGGACTaGAGGGGAACAGCACCAGAG +
Preference number: 4 (lower is better)
Translates to: GAGTAGEQHQRRWAWASATRGWD*RGTAPE
Trigger: CTCTGGTGCTGTTCCCCTGCAGTCCCAGCCCCGCGT...GGCCGAGGCCCAGGCCCAACGCCTCTGGTGCTGTTCCCCTGCAGTCCCAGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CCA 90 bp CAGCTCTGCTCAGCACCGTGCGCACTGGGCTCCAGGGAACCCGGTCAGGGGCTGCGAACAGGTTACCCATaGCGGCGCCCGCCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: QLCSAPCALGSREPGQGLRTGYP*RRPPLA
Trigger: GGCCAGGGGCGGGCGCCGCCATGGGTAACCTGTTCG...CAGCCCCTGACCGGGTTCCCTGGAGCCCAGTGCGCACGGTGCTGAGCAGAGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR TCA 90 bp ACCAGCAGGGAAGCTGAGGTGCGCCGGGAAGCCAGGCCAAGGGAGGGACCCCTTCCTGGGGCATCCCCGTaGGTCCCACAAGACGAGGCC +
Preference number: 4 (lower is better)
Translates to: TSREAEVRREARPREGPLPGASP*VPQDEA
Trigger: GGCCTCGTCTTGTGGGACTCACGGGGATGCCCCAGG...AAGGGGTCCCTCCCTTGGCCTGGCTTCCCGGCGCACCTCAGCTTCCCTGCTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp CGCGGGGCTGGGACTGCAGGGGAACAGCACCAGAGGCGTTGGGCCTGGGCCTCGCGCGGCTCTGCTTCTTaGGGCCGAACAGGTTACCCA +
Preference number: 4 (lower is better)
Translates to: RGAGTAGEQHQRRWAWASRGSAS*GRTGYP
Trigger: TGGGTAACCTGTTCGGCCGCAAGAAGCAGAGCCGCG...CGAGGCCCAGGCCCAACGCCTCTGGTGCTGTTCCCCTGCAGTCCCAGCCCCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp CACAGCCTCCAGTCCTGGCTGCTGGTGGCTCGGGGACCCGCAGGGCAGGAGGGTATGCGCCTGCGTGGCTaGAGCTCTGCTCAGCACCGT +
Preference number: 4 (lower is better)
Translates to: HSLQSWLLVARGPAGQEGMRLRG*SSAQHR
Trigger: ACGGTGCTGAGCAGAGCTGCAGCCACGCAGGCGCAT...ACCCTCCTGCCCTGCGGGTCCCCGAGCCACCAGCAGCCAGGACTGGAGGCTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CCA 90 bp GGGGCTGGGACTGCAGGGGAACAGCACCAGAGGCGTTGGGCCTGGGCCTCGGCCTCGCGCTCCAGCTGCTaGGCGATCCTCTTCTGGTAC +
Preference number: 4 (lower is better)
Translates to: GAGTAGEQHQRRWAWASASRSSC*AILFWY
Trigger: GTACCAGAAGAGGATCGCCCAGCAGCTGGAGCGCGA...GGCCGAGGCCCAGGCCCAACGCCTCTGGTGCTGTTCCCCTGCAGTCCCAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
3UTR CAA 72 bp CCTGTCTGGGGGTCGAGGTGGCCGCTCCCTTTGTCCTaGTGGCTTTCCACGGGCAGGGGCGGTCCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: PVWGSRWPLPLS*WLSTGRGGPSE
Trigger: CTCGCTGGGACCGCCCCTGCCCGTGGAAAGCCACAAGGACAAAGGGAGCGGCCACCTCGACCCCCAGACAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp AAGGTCTGGAGGTGTCTTCCTCACAGACGAGCGCGAGCCACGCGGGGCTGGGACTGGCCCGTTCCTTCCTaGCGTCCCGCAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: KVWRCLPHRRARATRGWDWPVPS*RPAAAA
Trigger: GGCAGCTGCTGCGGGACGGCAGGAAGGAACGGGCCA...GTCCCAGCCCCGCGTGGCTCGCGCTCGTCTGTGAGGAAGACACCTCCAGACCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CCA 90 bp CGGGGCTGCACCTGCCGGAGCAGCGTCTCCCAAGCATCGGAGGTCCTTTCTCAGGTGGGCCACAGTCCCTaGGGCATCCCCGTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: RGCTCRSSVSQASEVLSQVGHSP*GIPVSP
Trigger: GGGACTCACGGGGATGCCCCAGGGACTGTGGCCCAC...CTGAGAAAGGACCTCCGATGCTTGGGAGACGCTGCTCCGGCAGGTGCAGCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CCA 90 bp GAGAGCAGGCCAGTGGCGCCTGAGTGCGTTCAGGCTCAAGGTCTCCAGGAGACGCAGCACCAGAGGCGTTaGGCCTGGGCCTCGGCCACC +
Preference number: 4 (lower is better)
Translates to: ESRPVAPECVQAQGLQETQHQRR*AWASAT
Trigger: GGTGGCCGAGGCCCAGGCCCAACGCCTCTGGTGCTG...CGTCTCCTGGAGACCTTGAGCCTGAACGCACTCAGGCGCCACTGGCCTGCTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CCA 90 bp GGGGCTGGGACTGCAGGGGAACAGCACCAGAGGCGTTGGGCCTGGGCCTCGGCCCCTTCAAACTGGAGGTaGGTGTCTAGGGTGCGGAGG +
Preference number: 4 (lower is better)
Translates to: GAGTAGEQHQRRWAWASAPSNWR*VSRVRR
Trigger: CCTCCGCACCCTAGACACCCACCTCCAGTTTGAAGG...GGCCGAGGCCCAGGCCCAACGCCTCTGGTGCTGTTCCCCTGCAGTCCCAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CCA 90 bp CCAAGGTCTGGAGGTGTCTTCCTCACAGACGAGCGCGAGCCACGCGGGGCTGGGGGACAGAGCCGTGAGTaGCAAGGCGGGAGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: PRSGGVFLTDEREPRGAGGQSRE*QGGSQG
Trigger: GCCCTGACTCCCGCCTTGCCACTCACGGCTCTGTCC...CCCAGCCCCGCGTGGCTCGCGCTCGTCTGTGAGGAAGACACCTCCAGACCTTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CCA 90 bp CAGCGAGGAGCAAGAGGAAGCGCGGGGACCCCAAGGTCTGGAGGTGTCTTCCTCAGTCCTGGCTGCTGGTaGCTCGGGGACCCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: QRGARGSAGTPRSGGVFLSPGCW*LGDPQG
Trigger: GCCCTGCGGGTCCCCGAGCCACCAGCAGCCAGGACT...GAGGAAGACACCTCCAGACCTTGGGGTCCCCGCGCTTCCTCTTGCTCCTCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CCA 90 bp CGGGGCTGCACCTGCCGGAGCAGCGTCTCCCAAGCATCGGAGGTCCTTTCTCAGTCCAGTCCTGGCTGCTaGTGGCTCGGGGACCCGCAG +
Preference number: 4 (lower is better)
Translates to: RGCTCRSSVSQASEVLSQSSPGC*WLGDPQ
Trigger: CTGCGGGTCCCCGAGCCACCAGCAGCCAGGACTGGA...CTGAGAAAGGACCTCCGATGCTTGGGAGACGCTGCTCCGGCAGGTGCAGCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CCA 90 bp CAGCTCTGCTCAGCACCGTGCGCACTGGGCTCCAGGGAACCCGGTCAGGGGCTGGTCTGGGGGTCGAGGTaGCCGCTCCCTTTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: QLCSAPCALGSREPGQGLVWGSR*PLPLSL
Trigger: CAAGGACAAAGGGAGCGGCCACCTCGACCCCCAGAC...CAGCCCCTGACCGGGTTCCCTGGAGCCCAGTGCGCACGGTGCTGAGCAGAGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR TCA 90 bp TCTGTGGGCCACAGTCCCTGGGGCATCCCCGTGAGTCCCACAAGACGAGGCCACGTCAGGGGCTGGCCGTaGCCCAAACTCTCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: SVGHSPWGIPVSPTRRGHVRGWP*PKLSVG
Trigger: GCCCACAGAGAGTTTGGGTCACGGCCAGCCCCTGAC...GTGGCCTCGTCTTGTGGGACTCACGGGGATGCCCCAGGGACTGTGGCCCACAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR TCA 90 bp GGGAGTCAGGGCTCTCGGAGTCGTCAATTCAGCAAGAAAGCCCCTGGCCCGCCAGGTCTCGCAGTTCCATaGGCCCCAGCCGCGGGGACC +
Preference number: 4 (lower is better)
Translates to: GSQGSRSRQFSKKAPGPPGLAVP*APAAGT
Trigger: GGTCCCCGCGGCTGGGGCTCATGGAACTGCGAGACC...TGGCGGGCCAGGGGCTTTCTTGCTGAATTGACGACTCCGAGAGCCCTGACTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp TGGCCGCTCCCTTTGTCCTTGTGGCTTTCCACGGGCAGGGGCGGTCCCAGCGAGAGGATGGCCTTGTCCTaGTCCGTGACGCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: WPLPLSLWLSTGRGGPSERMALS*SVTRLC
Trigger: GCAGAGCCGCGTCACGGAGCAGGACAAGGCCATCCT...CTCGCTGGGACCGCCCCTGCCCGTGGAAAGCCACAAGGACAAAGGGAGCGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp GGTCTCCAGGAGACGCTCTGGAGTCCTCCTGCAATGCGCCTGCGTGGCTGCAGCGCAGGGAAGCTGAGGTaGGCCGGGAAGCCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: GLQETLWSPPAMRLRGCSAGKLR*AGKPGQ
Trigger: TTGGCCTGGCTTCCCGGCGCACCTCAGCTTCCCTGC...GCTGCAGCCACGCAGGCGCATTGCAGGAGGACTCCAGAGCGTCTCCTGGAGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp CCGGCCTGTCTGGGGGTCGAGGTGGCCGCTCCCTTTGTCCTTGTGGCTTTCCACTTCCGGGGCTGCACCTaGCGGAGCAGCGTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: PACLGVEVAAPFVLVAFHFRGCT*RSSVSQ
Trigger: TTGGGAGACGCTGCTCCGGCAGGTGCAGCCCCGGAA...GTGGAAAGCCACAAGGACAAAGGGAGCGGCCACCTCGACCCCCAGACAGGCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp TGGCCGCTCCCTTTGTCCTTGTGGCTTTCCACGGGCAGGGGCGGTCCCAGCGAGACAAACTTCCGGGGCTaGACCTGCCGGAGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: WPLPLSLWLSTGRGGPSETNFRG*TCRSSV
Trigger: GACGCTGCTCCGGCAGGTGCAGCCCCGGAAGTTTGT...CTCGCTGGGACCGCCCCTGCCCGTGGAAAGCCACAAGGACAAAGGGAGCGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp CCACGCGGGGCTGGGACTGCAGGGGAACAGCACCAGAGGCGTTGGGCCTGGGCCACCAAACCAGCCCTGTaGACGAGAAGTCACGCCATG +
Preference number: 4 (lower is better)
Translates to: PRGAGTAGEQHQRRWAWATKPAL*TRSHAM
Trigger: CATGGCGTGACTTCTCGTGCACAGGGCTGGTTTGGT...GGCCCAGGCCCAACGCCTCTGGTGCTGTTCCCCTGCAGTCCCAGCCCCGCGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CCA 90 bp GAGGGACCCCTTAACGGAAGCCTGCACCAGCTAATGGGAGCAGCGAGGAGCAAGACGGGCCGGCCTGTCTaGGGGTCGAGGTGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: EGPLNGSLHQLMGAARSKTGRPV*GSRWPL
Trigger: GAGCGGCCACCTCGACCCCCAGACAGGCCGGCCCGT...CTTGCTCCTCGCTGCTCCCATTAGCTGGTGCAGGCTTCCGTTAAGGGGTCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR TCA 90 bp CACAGCCTCCAGTCCTGGCTGCTGGTGGCTCGGGGACCCGCAGGGCAGGAGGGTCTTCATCCTCCTGAGTaGAGCTTCCTGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: HSLQSWLLVARGPAGQEGLHPPE*SFLPGA
Trigger: AGCTCCTGGCAGGAAGCTTCACTCAGGAGGATGAAG...ACCCTCCTGCCCTGCGGGTCCCCGAGCCACCAGCAGCCAGGACTGGAGGCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp GCGAGGAGCAAGAGGAAGCGCGGGGACCCCAAGGTCTGGAGGTGTCTTCCTCACCGCTCGCGCTCCAGCTaGTGGGCGATCCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: ARSKRKRGDPKVWRCLPHRSRSS*WAILFW
Trigger: CCAGAAGAGGATCGCCCAGCAGCTGGAGCGCGAGCG...GTGAGGAAGACACCTCCAGACCTTGGGGTCCCCGCGCTTCCTCTTGCTCCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp TCTGTGGGCCACAGTCCCTGGGGCATCCCCGTGAGTCCCACAAGACGAGGCCACGGAGTCCTCCTGCAATaGGCCTGCGTGGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SVGHSPWGIPVSPTRRGHGVLLQ*ACVAAA
Trigger: AGCTGCAGCCACGCAGGCGCATTGCAGGAGGACTCC...GTGGCCTCGTCTTGTGGGACTCACGGGGATGCCCCAGGGACTGTGGCCCACAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp CCGGCCTGTCTGGGGGTCGAGGTGGCCGCTCCCTTTGTCCTTGTGGCTTTCCACGCTCTGGAGTCCTCCTaGAATGCGCCTGCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PACLGVEVAAPFVLVAFHALESS*NAPAWL
Trigger: CAGCCACGCAGGCGCATTGCAGGAGGACTCCAGAGC...GTGGAAAGCCACAAGGACAAAGGGAGCGGCCACCTCGACCCCCAGACAGGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp TGGCCGCTCCCTTTGTCCTTGTGGCTTTCCACGGGCAGGGGCGGTCCCAGCGAGCCAGTGGCGCCTGAGTaGGTTCAGGCTCAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: WPLPLSLWLSTGRGGPSEPVAPE*VQAQGL
Trigger: GAGACCTTGAGCCTGAACGCACTCAGGCGCCACTGG...CTCGCTGGGACCGCCCCTGCCCGTGGAAAGCCACAAGGACAAAGGGAGCGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp TGTGGCTTTCCACGGGCAGGGGCGGTCCCAGCGAGATCGTCTCATAACCAAACCGCCTCCAGTCCTGGCTaGTGGTGGCTCGGGGACCCG +
Preference number: 4 (lower is better)
Translates to: CGFPRAGAVPARSSHNQTASSPG*WWLGDP
Trigger: CGGGTCCCCGAGCCACCAGCAGCCAGGACTGGAGGC...GGTTTGGTTATGAGACGATCTCGCTGGGACCGCCCCTGCCCGTGGAAAGCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CCA 90 bp CAGCCTCCAGTCCTGGCTGCTGGTGGCTCGGGGACCCGCAGGGCAGGAGGGTCCGACAGGGACGTTTTCTaGGATCTTCTCAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: QPPVLAAGGSGTRRAGGSDRDVF*DLLRKG
Trigger: CCCCTTCCTGAGAAGATCCCAGAAAACGTCCCTGTC...GGACCCTCCTGCCCTGCGGGTCCCCGAGCCACCAGCAGCCAGGACTGGAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CCA 90 bp CAGCCTCCAGTCCTGGCTGCTGGTGGCTCGGGGACCCGCAGGGCAGGAGGGTCCACAACCGGCAGAAGCTaGGCTCGGTCGAGAGTTAAT +
Preference number: 4 (lower is better)
Translates to: QPPVLAAGGSGTRRAGGSTTGRS*ARSRVN
Trigger: ATTAACTCTCGACCGAGCCCAGCTTCTGCCGGTTGT...GGACCCTCCTGCCCTGCGGGTCCCCGAGCCACCAGCAGCCAGGACTGGAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR TCA 90 bp CAGCGAGGAGCAAGAGGAAGCGCGGGGACCCCAAGGTCTGGAGGTGTCTTCCTCCCTTGTCCTGCTCCGTaGCGCGGCTCTGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: QRGARGSAGTPRSGGVFLPCPAP*RGSASC
Trigger: GCAAGAAGCAGAGCCGCGTCACGGAGCAGGACAAGG...GAGGAAGACACCTCCAGACCTTGGGGTCCCCGCGCTTCCTCTTGCTCCTCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR TCA 90 bp CCGGCCTGTCTGGGGGTCGAGGTGGCCGCTCCCTTTGTCCTTGTGGCTTTCCACTGGCCTCCAGGCTGCTaGTCTGGTTCTCCGTCCTGT +
Preference number: 4 (lower is better)
Translates to: PACLGVEVAAPFVLVAFHWPPGC*SGSPSC
Trigger: ACAGGACGGAGAACCAGATCAGCAGCCTGGAGGCCA...GTGGAAAGCCACAAGGACAAAGGGAGCGGCCACCTCGACCCCCAGACAGGCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR TCA 90 bp GGAGCAAGAGGAAGCGCGGGGACCCCAAGGTCTGGAGGTGTCTTCCTCACAGACCAGGCCAGTGGCGCCTaGGTGCGTTCAGGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: GARGSAGTPRSGGVFLTDQASGA*VRSGSR
Trigger: CCTTGAGCCTGAACGCACTCAGGCGCCACTGGCCTG...GTCTGTGAGGAAGACACCTCCAGACCTTGGGGTCCCCGCGCTTCCTCTTGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp TGGCCGCTCCCTTTGTCCTTGTGGCTTTCCACGGGCAGGGGCGGTCCCAGCGAGAGCTTGTCCCGCTGCTaGTTCAGTTGCAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: WPLPLSLWLSTGRGGPSESLSRC*FSCRMA
Trigger: GGCCATCCTGCAACTGAAGCAGCAGCGGGACAAGCT...CTCGCTGGGACCGCCCCTGCCCGTGGAAAGCCACAAGGACAAAGGGAGCGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp CGGACTGAGAGCAGGCCAGTGGCGCCTGAGTGCGTTCAGGCTCAAGGTCTCCAGGCCACGTTACGAAGCTaGCACCAGCTCCGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: RTESRPVAPECVQAQGLQATLRS*HQLRLP
Trigger: AGGCAGGCGGAGCTGGTGGCAGCTTCGTAACGTGGC...CTGGAGACCTTGAGCCTGAACGCACTCAGGCGCCACTGGCCTGCTCTCAGTCCG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp GGAGCAAGAGGAAGCGCGGGGACCCCAAGGTCTGGAGGTGTCTTCCTCACAGACGCGTGGCTGCAGCTCTaGTCAGCACCGTGCGCACTG +
Preference number: 4 (lower is better)
Translates to: GARGSAGTPRSGGVFLTDAWLQL*SAPCAL
Trigger: CAGTGCGCACGGTGCTGAGCAGAGCTGCAGCCACGC...GTCTGTGAGGAAGACACCTCCAGACCTTGGGGTCCCCGCGCTTCCTCTTGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp GAGAGCAGGCCAGTGGCGCCTGAGTGCGTTCAGGCTCAAGGTCTCCAGGAGACGGGTGGGTGTCTAGGGTaGGGAGGCAGAGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: ESRPVAPECVQAQGLQETGGCLG*GGRGTE
Trigger: CTCTGTGCCTCTGCCTCCGCACCCTAGACACCCACC...CGTCTCCTGGAGACCTTGAGCCTGAACGCACTCAGGCGCCACTGGCCTGCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CCA 90 bp CCAAGGTCTGGAGGTGTCTTCCTCACAGACGAGCGCGAGCCACGCGGGGCTGGGTCCAGGCTGCTGATCTaGTTCTCCGTCCTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PRSGGVFLTDEREPRGAGSRLLI*FSVLSR
Trigger: CCTGGACAGGACGGAGAACCAGATCAGCAGCCTGGA...CCCAGCCCCGCGTGGCTCGCGCTCGTCTGTGAGGAAGACACCTCCAGACCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CCA 90 bp GTCAGGGCTCTCGGAGTCGTCAATTCAGCAAGAAAGCCCCTGGCCCGCCACCTTCGAGCCACGCGGGGCTaGGACTGCAGGGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: VRALGVVNSARKPLARHLRATRG*DCRGTA
Trigger: TGCTGTTCCCCTGCAGTCCCAGCCCCGCGTGGCTCG...AAGGTGGCGGGCCAGGGGCTTTCTTGCTGAATTGACGACTCCGAGAGCCCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CCA 90 bp GGAGTCAGGGCTCTCGGAGTCGTCAATTCAGCAAGAAAGCCCCTGGCCCGCCACCACAGCCTCCAGTCCTaGCTGCTGGTGGCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: GVRALGVVNSARKPLARHHSLQS*LLVARG
Trigger: TCCCCGAGCCACCAGCAGCCAGGACTGGAGGCTGTG...GTGGCGGGCCAGGGGCTTTCTTGCTGAATTGACGACTCCGAGAGCCCTGACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CCA 90 bp TGGCCGCTCCCTTTGTCCTTGTGGCTTTCCACGGGCAGGGGCGGTCCCAGCGAGTGGGCGATCCTCTTCTaGTACTGCCTCAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: WPLPLSLWLSTGRGGPSEWAILF*YCLSLS
Trigger: GGACAAGCTGAGGCAGTACCAGAAGAGGATCGCCCA...CTCGCTGGGACCGCCCCTGCCCGTGGAAAGCCACAAGGACAAAGGGAGCGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR TCA 90 bp TGTGGCTTTCCACGGGCAGGGGCGGTCCCAGCGAGATCGTCTCATAACCAAACCGCCTGGGCCTGGCCTTaGCAGGGACGTTTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: CGFPRAGAVPARSSHNQTAWAWP*QGRFLG
Trigger: TCCCAGAAAACGTCCCTGTCAAGGCCAGGCCCAGGC...GGTTTGGTTATGAGACGATCTCGCTGGGACCGCCCCTGCCCGTGGAAAGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR TCA 90 bp GGGAGTCAGGGCTCTCGGAGTCGTCAATTCAGCAAGAAAGCCCCTGGCCCGCCAAGAGTTAATCCGGACTaGGAGCAGGCCAGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: GSQGSRSRQFSKKAPGPPRVNPD*EQASGA
Trigger: GGCGCCACTGGCCTGCTCTCAGTCCGGATTAACTCT...TGGCGGGCCAGGGGCTTTCTTGCTGAATTGACGACTCCGAGAGCCCTGACTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp TGTGGCTTTCCACGGGCAGGGGCGGTCCCAGCGAGATCGTCTCATAACCAAACCTCCGTGACGCGGCTCTaGTTCTTGCGGCCGAACAGG +
Preference number: 4 (lower is better)
Translates to: CGFPRAGAVPARSSHNQTSVTRL*FLRPNR
Trigger: CCTGTTCGGCCGCAAGAAGCAGAGCCGCGTCACGGA...GGTTTGGTTATGAGACGATCTCGCTGGGACCGCCCCTGCCCGTGGAAAGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp CGGACTGAGAGCAGGCCAGTGGCGCCTGAGTGCGTTCAGGCTCAAGGTCTCCAGCGCTGCTGCTTCAGTTaGAGGATGGCCTTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: RTESRPVAPECVQAQGLQRCCFS*RMALSC
Trigger: GCAGGACAAGGCCATCCTGCAACTGAAGCAGCAGCG...CTGGAGACCTTGAGCCTGAACGCACTCAGGCGCCACTGGCCTGCTCTCAGTCCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp CGCTCCCTTTGTCCTTGTGGCTTTCCACGGGCAGGGGCGGTCCCAGCGAGATCGCTCAGCTTGTCCCGCTaGTGCTTCAGTTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: RSLCPCGFPRAGAVPARSLSLSR*CFSCRM
Trigger: CATCCTGCAACTGAAGCAGCAGCGGGACAAGCTGAG...CGATCTCGCTGGGACCGCCCCTGCCCGTGGAAAGCCACAAGGACAAAGGGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp GAGTCAGGGCTCTCGGAGTCGTCAATTCAGCAAGAAAGCCCCTGGCCCGCCACCTACTCCACGGCCTCCTaGGTCTCGTCCAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: ESGLSESSIQQESPWPATYSTAS*VSSRIL
Trigger: GAGGATCCTGGACGAGACGCAGGAGGCCGTGGAGTA...GGTGGCGGGCCAGGGGCTTTCTTGCTGAATTGACGACTCCGAGAGCCCTGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp CCACAACCGGCAGAAGCTGGGCTCGGTCGAGAGTTAATCCGGACTGAGAGCAGGCTCTGCTCAGCACCGTaGGCACTGGGCTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: PQPAEAGLGRELIRTESRLCSAP*ALGSRE
Trigger: TTCCCTGGAGCCCAGTGCGCACGGTGCTGAGCAGAG...CCTGCTCTCAGTCCGGATTAACTCTCGACCGAGCCCAGCTTCTGCCGGTTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp GGGAGTCAGGGCTCTCGGAGTCGTCAATTCAGCAAGAAAGCCCCTGGCCCGCCACGAGAAGTCACGCCATaGCCCACAGCCTCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: GSQGSRSRQFSKKAPGPPREVTP*PTASSP
Trigger: AGGACTGGAGGCTGTGGGGCATGGCGTGACTTCTCG...TGGCGGGCCAGGGGCTTTCTTGCTGAATTGACGACTCCGAGAGCCCTGACTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CCA 90 bp TCCCAGCGAGATCGTCTCATAACCAAACCAGCCCTGTGCACGAGAAGTCACGCCCAGCACCGTGCGCACTaGGCTCCAGGGAACCCGGTC +
Preference number: 4 (lower is better)
Translates to: SQRDRLITKPALCTRSHAQHRAH*APGNPV
Trigger: GACCGGGTTCCCTGGAGCCCAGTGCGCACGGTGCTG...GGCGTGACTTCTCGTGCACAGGGCTGGTTTGGTTATGAGACGATCTCGCTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CCA 90 bp GTCAGGGCTCTCGGAGTCGTCAATTCAGCAAGAAAGCCCCTGGCCCGCCACCTTCTGAGAGCAGGCCAGTaGCGCCTGAGTGCGTTCAGG +
Preference number: 4 (lower is better)
Translates to: VRALGVVNSARKPLARHLLRAGQ*RLSAFR
Trigger: CCTGAACGCACTCAGGCGCCACTGGCCTGCTCTCAG...AAGGTGGCGGGCCAGGGGCTTTCTTGCTGAATTGACGACTCCGAGAGCCCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CCA 90 bp GCGAGGAGCAAGAGGAAGCGCGGGGACCCCAAGGTCTGGAGGTGTCTTCCTCACCAGCAAGAAAGCCCCTaGCCCGCCACCTTCAAACTG +
Preference number: 4 (lower is better)
Translates to: ARSKRKRGDPKVWRCLPHQQESP*PATFKL
Trigger: CAGTTTGAAGGTGGCGGGCCAGGGGCTTTCTTGCTG...GTGAGGAAGACACCTCCAGACCTTGGGGTCCCCGCGCTTCCTCTTGCTCCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CCA 90 bp GGGAGTCAGGGCTCTCGGAGTCGTCAATTCAGCAAGAAAGCCCCTGGCCCGCCACTCCCTTTGTCCTTGTaGCTTTCCACGGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GSQGSRSRQFSKKAPGPPLPLSL*LSTGRG
Trigger: GCCCCTGCCCGTGGAAAGCCACAAGGACAAAGGGAG...TGGCGGGCCAGGGGCTTTCTTGCTGAATTGACGACTCCGAGAGCCCTGACTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp CTGGAGGTGTCTTCCTCACAGACGAGCGCGAGCCACGCGGGGCTGGGACTGCAGTTGTTCCTGAGTGATTaGGCTCAGCTCCTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: LEVSSSQTSASHAGLGLQLFLSD*AQLLQD
Trigger: ATCCTGGAGGAGCTGAGCGCAATCACTCAGGAACAA...CTGCAGTCCCAGCCCCGCGTGGCTCGCGCTCGTCTGTGAGGAAGACACCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp GAGTCAGGGCTCTCGGAGTCGTCAATTCAGCAAGAAAGCCCCTGGCCCGCCACCGAGAGGTTCAGCACATaGTGGTCTCCTGGGGATCCC +
Preference number: 4 (lower is better)
Translates to: ESGLSESSIQQESPWPATERFST*WSPGDP
Trigger: GGGATCCCCAGGAGACCAGCATGTGCTGAACCTCTC...GGTGGCGGGCCAGGGGCTTTCTTGCTGAATTGACGACTCCGAGAGCCCTGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CCA 90 bp CCGGCCTGTCTGGGGGTCGAGGTGGCCGCTCCCTTTGTCCTTGTGGCTTTCCACTCCAGGAGCTGCTCCTaGTATCGCTTCTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: PACLGVEVAAPFVLVAFHSRSCS*YRFFLS
Trigger: GCTCAAGAAGAAGCGATACCAGGAGCAGCTCCTGGA...GTGGAAAGCCACAAGGACAAAGGGAGCGGCCACCTCGACCCCCAGACAGGCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CCA 90 bp CAGCGAGGAGCAAGAGGAAGCGCGGGGACCCCAAGGTCTGGAGGTGTCTTCCTCTCAGCTCCTCCAGGATaGCGTCTTCATCCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: QRGARGSAGTPRSGGVFLSAPPG*RLHPPE
Trigger: CTCAGGAGGATGAAGACGCCATCCTGGAGGAGCTGA...GAGGAAGACACCTCCAGACCTTGGGGTCCCCGCGCTTCCTCTTGCTCCTCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CCA 90 bp CGGGGCTGCACCTGCCGGAGCAGCGTCTCCCAAGCATCGGAGGTCCTTTCTCAGCTCGGAGGGAACCTCTaGCAGCTCTATTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: RGCTCRSSVSQASEVLSQLGGNL*QLYLFL
Trigger: CAGGAACAAATAGAGCTGCCAGAGGTTCCCTCCGAG...CTGAGAAAGGACCTCCGATGCTTGGGAGACGCTGCTCCGGCAGGTGCAGCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CCA 90 bp TGTGGCTTTCCACGGGCAGGGGCGGTCCCAGCGAGATCGTCTCATAACCAAACCTGCAATGCGCCTGCGTaGCTGCAGCTCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: CGFPRAGAVPARSSHNQTCNAPA*LQLCSA
Trigger: TGCTGAGCAGAGCTGCAGCCACGCAGGCGCATTGCA...GGTTTGGTTATGAGACGATCTCGCTGGGACCGCCCCTGCCCGTGGAAAGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CCA 90 bp TGTGGCTTTCCACGGGCAGGGGCGGTCCCAGCGAGATCGTCTCATAACCAAACCCTCCAGGAGACGCTCTaGAGTCCTCCTGCAATGCGC +
Preference number: 4 (lower is better)
Translates to: CGFPRAGAVPARSSHNQTLQETL*SPPAMR
Trigger: GCGCATTGCAGGAGGACTCCAGAGCGTCTCCTGGAG...GGTTTGGTTATGAGACGATCTCGCTGGGACCGCCCCTGCCCGTGGAAAGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR TCA 90 bp CGCTCCCTTTGTCCTTGTGGCTTTCCACGGGCAGGGGCGGTCCCAGCGAGATCGAGCTCTATTTGTTCCTaGGTGATTGCGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RSLCPCGFPRAGAVPARSSSICS*VIALSS
Trigger: GGAGCTGAGCGCAATCACTCAGGAACAAATAGAGCT...CGATCTCGCTGGGACCGCCCCTGCCCGTGGAAAGCCACAAGGACAAAGGGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CCA 90 bp GAGGGACCCCTTAACGGAAGCCTGCACCAGCTAATGGGAGCAGCGAGGAGCAAGTCGTCTATTTGCCGCTaGTACTCCACGGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: EGPLNGSLHQLMGAARSKSSICR*YSTASC
Trigger: GCAGGAGGCCGTGGAGTACCAGCGGCAAATAGACGA...CTTGCTCCTCGCTGCTCCCATTAGCTGGTGCAGGCTTCCGTTAAGGGGTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR TCA 90 bp CCACAACCGGCAGAAGCTGGGCTCGGTCGAGAGTTAATCCGGACTGAGAGCAGGGGTATCGCTTCTTCTTaGGCAGCAGCTTGGCCCGTT +
Preference number: 4 (lower is better)
Translates to: PQPAEAGLGRELIRTESRGIASS*AAAWPV
Trigger: AACGGGCCAAGCTGCTGCTCAAGAAGAAGCGATACC...CCTGCTCTCAGTCCGGATTAACTCTCGACCGAGCCCAGCTTCTGCCGGTTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR TCA 90 bp CAGCGAGGAGCAAGAGGAAGCGCGGGGACCCCAAGGTCTGGAGGTGTCTTCCTCCTATTTGTTCCTGAGTaGTTGCGCTCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: QRGARGSAGTPRSGGVFLLFVPE*LRSAPP
Trigger: TGGAGGAGCTGAGCGCAATCACTCAGGAACAAATAG...GAGGAAGACACCTCCAGACCTTGGGGTCCCCGCGCTTCCTCTTGCTCCTCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp GAGGGACCCCTTAACGGAAGCCTGCACCAGCTAATGGGAGCAGCGAGGAGCAAGATCCTCTTCTGGTACTaGCTCAGCTTGTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: EGPLNGSLHQLMGAARSKILFWY*LSLSRC
Trigger: GCAGCGGGACAAGCTGAGGCAGTACCAGAAGAGGAT...CTTGCTCCTCGCTGCTCCCATTAGCTGGTGCAGGCTTCCGTTAAGGGGTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp TCAGGGCTCTCGGAGTCGTCAATTCAGCAAGAAAGCCCCTGGCCCGCCACCTTCGTCCTGTCCAGGAGCTaGTCCTGGTATCGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SGLSESSIQQESPWPATFVLSRS*SWYRFF
Trigger: GAAGAAGCGATACCAGGAGCAGCTCCTGGACAGGAC...GAAGGTGGCGGGCCAGGGGCTTTCTTGCTGAATTGACGACTCCGAGAGCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp CGGGGCTGCACCTGCCGGAGCAGCGTCTCCCAAGCATCGGAGGTCCTTTCTCAGCACTCATTTCCAAACTaGAGCCCCTCCATCACTTTC +
Preference number: 4 (lower is better)
Translates to: RGCTCRSSVSQASEVLSQHSFPN*SPSITF
Trigger: GAAAGTGATGGAGGGGCTGCAGTTTGGAAATGAGTG...CTGAGAAAGGACCTCCGATGCTTGGGAGACGCTGCTCCGGCAGGTGCAGCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp TGGCCGCTCCCTTTGTCCTTGTGGCTTTCCACGGGCAGGGGCGGTCCCAGCGAGATGGACATCACCTGGTaGATCTTGTTCAGACACTCA +
Preference number: 4 (lower is better)
Translates to: WPLPLSLWLSTGRGGPSEMDITW*ILFRHS
Trigger: TGAGTGTCTGAACAAGATGCACCAGGTGATGTCCAT...CTCGCTGGGACCGCCCCTGCCCGTGGAAAGCCACAAGGACAAAGGGAGCGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp GCGAGGAGCAAGAGGAAGCGCGGGGACCCCAAGGTCTGGAGGTGTCTTCCTCACCTGAGTGAAGCTTCCTaGCAGGAGCTCGTCTATTTG +
Preference number: 4 (lower is better)
Translates to: ARSKRKRGDPKVWRCLPHLSEAS*QELVYL
Trigger: CAAATAGACGAGCTCCTGGCAGGAAGCTTCACTCAG...GTGAGGAAGACACCTCCAGACCTTGGGGTCCCCGCGCTTCCTCTTGCTCCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CCA 90 bp CCAAGGTCTGGAGGTGTCTTCCTCACAGACGAGCGCGAGCCACGCGGGGCTGGGTCAATGGACATCACCTaGTGCATCTTGTTCAGACAC +
Preference number: 4 (lower is better)
Translates to: PRSGGVFLTDEREPRGAGSMDIT*CILFRH
Trigger: GTGTCTGAACAAGATGCACCAGGTGATGTCCATTGA...CCCAGCCCCGCGTGGCTCGCGCTCGTCTGTGAGGAAGACACCTCCAGACCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR TCA 90 bp CAGGGGCGGTCCCAGCGAGATCGTCTCATAACCAAACCAGCCCTGTGCACGAGAGTGAACTCAATACTCTaGACCATGGCCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: QGRSQRDRLITKPALCTRVNSIL*TMASRL
Trigger: CAGCCTGGAGGCCATGGTTCAGAGTATTGAGTTCAC...TCTCGTGCACAGGGCTGGTTTGGTTATGAGACGATCTCGCTGGGACCGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR GCA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGCCAGGCAGCAGGGCTTaGCCACGGCCCAGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQPGSRA*PRPRKA
Trigger: GGCCTTCCTGGGCCGTGGGCAAGCCCTGCTGCCTGG...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR GCA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGTGGCCCGTTCCTTCCTaGCGTCCCGCAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQWPVPS*RPAAAA
Trigger: GGCAGCTGCTGCGGGACGGCAGGAAGGAACGGGCCA...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR GCA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGCGCTCGCGCTCCAGCTaGTGGGCGATCCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQRSRSS*WAILFW
Trigger: CCAGAAGAGGATCGCCCAGCAGCTGGAGCGCGAGCG...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR TCA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGTGGCCTCCAGGCTGCTaGTCTGGTTCTCCGTCCTGT +
Preference number: 4 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQWPPGC*SGSPSC
Trigger: ACAGGACGGAGAACCAGATCAGCAGCCTGGAGGCCA...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR GCA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGTACTCCACGGCCTCCTaGGTCTCGTCCAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQYSTAS*VSSRIL
Trigger: GAGGATCCTGGACGAGACGCAGGAGGCCGTGGAGTA...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR CCA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGTCGCGCTCCAGCTGCTaGGCGATCCTCTTCTGGTAC +
Preference number: 4 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQSRSSC*AILFWY
Trigger: GTACCAGAAGAGGATCGCCCAGCAGCTGGAGCGCGA...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR CCA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGTCCAGGCTGCTGATCTaGTTCTCCGTCCTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQSRLLI*FSVLSR
Trigger: CCTGGACAGGACGGAGAACCAGATCAGCAGCCTGGA...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR CCA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGTCGTCTATTTGCCGCTaGTACTCCACGGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQSSICR*YSTASC
Trigger: GCAGGAGGCCGTGGAGTACCAGCGGCAAATAGACGA...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR CCA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGCGGCCCAGGAAGGCCTaGGAGCATTCTGTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQRPRKA*EHSVLF
Trigger: GAACAAGACAGAATGCTCCCAGGCCTTCCTGGGCCG...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR TCA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGGGTATCGCTTCTTCTTaGGCAGCAGCTTGGCCCGTT +
Preference number: 4 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQGIASS*AAAWPV
Trigger: AACGGGCCAAGCTGCTGCTCAAGAAGAAGCGATACC...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR TCA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGCTTCATCCTCCTGAGTaGAGCTTCCTGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQLHPPE*SFLPGA
Trigger: AGCTCCTGGCAGGAAGCTTCACTCAGGAGGATGAAG...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR GCA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGATCCTCTTCTGGTACTaGCTCAGCTTGTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQILFWY*LSLSRC
Trigger: GCAGCGGGACAAGCTGAGGCAGTACCAGAAGAGGAT...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR GCA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGGTCCTGTCCAGGAGCTaGTCCTGGTATCGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQVLSRS*SWYRFF
Trigger: GAAGAAGCGATACCAGGAGCAGCTCCTGGACAGGAC...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR CCA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGTGGGCGATCCTCTTCTaGTACTGCCTCAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQWAILF*YCLSLS
Trigger: GGACAAGCTGAGGCAGTACCAGAAGAGGATCGCCCA...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR CCA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGTCAGCTCCTCCAGGATaGCGTCTTCATCCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQSAPPG*RLHPPE
Trigger: CTCAGGAGGATGAAGACGCCATCCTGGAGGAGCTGA...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR TCA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGGTGAACTCAATACTCTaGACCATGGCCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQVNSIL*TMASRL
Trigger: CAGCCTGGAGGCCATGGTTCAGAGTATTGAGTTCAC...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR CCA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGTCCAGGAGCTGCTCCTaGTATCGCTTCTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQSRSCS*YRFFLS
Trigger: GCTCAAGAAGAAGCGATACCAGGAGCAGCTCCTGGA...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR CCA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGCTCGGAGGGAACCTCTaGCAGCTCTATTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQLGGNL*QLYLFL
Trigger: CAGGAACAAATAGAGCTGCCAGAGGTTCCCTCCGAG...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR TCA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGCTATTTGTTCCTGAGTaGTTGCGCTCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQLFVPE*LRSAPP
Trigger: TGGAGGAGCTGAGCGCAATCACTCAGGAACAAATAG...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR TCA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGAGCTCTATTTGTTCCTaGGTGATTGCGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQSSICS*VIALSS
Trigger: GGAGCTGAGCGCAATCACTCAGGAACAAATAGAGCT...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR TCA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGGGTATGGCTCTCTTATaGGGTTGCCCAGTTACCGAA +
Preference number: 4 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQGMALL*GCPVTE
Trigger: TTCGGTAACTGGGCAACCTCATAAGAGAGCCATACC...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR GCA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGCTGAGTGAAGCTTCCTaGCAGGAGCTCGTCTATTTG +
Preference number: 4 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQLSEAS*QELVYL
Trigger: CAAATAGACGAGCTCCTGGCAGGAAGCTTCACTCAG...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR GCA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGTTGTTCCTGAGTGATTaGGCTCAGCTCCTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQLFLSD*AQLLQD
Trigger: ATCCTGGAGGAGCTGAGCGCAATCACTCAGGAACAA...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR GCA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGCACTCATTTCCAAACTaGAGCCCCTCCATCACTTTC +
Preference number: 4 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQHSFPN*SPSITF
Trigger: GAAAGTGATGGAGGGGCTGCAGTTTGGAAATGAGTG...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR TCA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGCTGAATGTGTCTCTTTaGATGGGGTATGGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQLNVSL*MGYGSL
Trigger: AAGAGAGCCATACCCCATTCAAAGAGACACATTCAG...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR GCA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGATGGACATCACCTGGTaGATCTTGTTCAGACACTCA +
Preference number: 4 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQMDITW*ILFRHS
Trigger: TGAGTGTCTGAACAAGATGCACCAGGTGATGTCCAT...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR CCA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGTCAATGGACATCACCTaGTGCATCTTGTTCAGACAC +
Preference number: 4 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQSMDIT*CILFRH
Trigger: GTGTCTGAACAAGATGCACCAGGTGATGTCCATTGA...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR CCA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGAAACATGGAAATACCTaGGATCTTCTCAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQKHGNT*DLLRKG
Trigger: CCCCTTCCTGAGAAGATCCCAGGTATTTCCATGTTT...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR GCA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGAATCCACTTTTCTCCTaGGAATTCCAACCATTCAAA +
Preference number: 4 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQNPLFS*EFQPFK
Trigger: TTTGAATGGTTGGAATTCGCAGGAGAAAAGTGGATT...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS CCA 90 bp CTGCTTCTTGCGGCCGAACAGGTTACCCATGGCGGCGCCCGCCCCTaGCCCGGGACCCACCAAGTCCAATCGCCACCGCCGCCCCGCGGC +
Preference number: 5 (lower is better)
Translates to: LLLAAEQVTHGGARP*PGTHQVQSPPPPRG
Trigger: GCCGCGGGGCGGCGGTGGCGATTGGACTTGGTGGGTCCCGGGCCAGGGGCGGGCGCCGCCATGGGTAACCTGTTCGGCCGCAAGAAGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CAA 90 bp CACAGCCTCCAGTCCTGGCTGCTGGTGGCTCGGGGACCCGCAGGGCAGGAGGGTCCGCTCCCTTTGTCCTaGTGGCTTTCCACGGGCAGG +
Preference number: 5 (lower is better)
Translates to: HSLQSWLLVARGPAGQEGPLPLS*WLSTGR
Trigger: CCTGCCCGTGGAAAGCCACAAGGACAAAGGGAGCGG...ACCCTCCTGCCCTGCGGGTCCCCGAGCCACCAGCAGCCAGGACTGGAGGCTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS GCA 90 bp GCCAGGCACGCACGCCCCCAAGCCAAACAGCCAGGCAGCAGGGCTTaGCCACGGCCCAGGAAGGCCTGGGAGCATTCTGTCTTGTTCCCT +
Preference number: 5 (lower is better)
Translates to: ARHARPQAKQPGSRA*PRPRKAWEHSVLFP
Trigger: AGGGAACAAGACAGAATGCTCCCAGGCCTTCCTGGGCCGTGGGCAAGCCCTGCTGCCTGGCTGTTTGGCTTGGGGGCGTGCGTGCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS CCA 90 bp CGGGCCAGGGCGCGCTCGCGCTCCAGCTGCTGGGCGATCCTCTTCTaGTACTGCCTCAGCTTGTCCCGCTGCTGCTTCAGTTGCAGGATG +
Preference number: 5 (lower is better)
Translates to: RARARSRSSCWAILF*YCLSLSRCCFSCRM
Trigger: CATCCTGCAACTGAAGCAGCAGCGGGACAAGCTGAGGCAGTACCAGAAGAGGATCGCCCAGCAGCTGGAGCGCGAGCGCGCCCTGGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS CCA 90 bp CGGGCCAGGGCGCGCTCGCGCTCCAGCTGCTGGGCGATCCTCTTCTaGTACTGCCTCAGCTTGTCCCGCTGCTGCTTCAGTTGCTGGATG +
Preference number: 5 (lower is better)
Translates to: RARARSRSSCWAILF*YCLSLSRCCFSCWM
Trigger: CATCCAGCAACTGAAGCAGCAGCGGGACAAGCTGAGGCAGTACCAGAAGAGGATCGCCCAGCAGCTGGAGCGCGAGCGCGCCCTGGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572525.5
CDS-3UTR CAA 90 bp CTGGAGGTGTCTTCCTCACAGACGAGCGCGAGCCACGCGGGGCTGGGACTGCAGACGCGGCTCTGCTTCTaGCGGCCGAACAGGTTACCC +
Preference number: 5 (lower is better)
Translates to: LEVSSSQTSASHAGLGLQTRLCF*RPNRLP
Trigger: GGGTAACCTGTTCGGCCGCAAGAAGCAGAGCCGCGT...CTGCAGTCCCAGCCCCGCGTGGCTCGCGCTCGTCTGTGAGGAAGACACCTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS GCA 90 bp TGCTTCAGTTGCAGGATGGCCTTGTCCTGCTCCGTGACGCGGCTCTaGTTCTTGCGGCCGAACAGGTTACCCATGGCGGCGCCCGCCCCT +
Preference number: 5 (lower is better)
Translates to: CFSCRMALSCSVTRL*FLRPNRLPMAAPAP
Trigger: AGGGGCGGGCGCCGCCATGGGTAACCTGTTCGGCCGCAAGAAGCAGAGCCGCGTCACGGAGCAGGACAAGGCCATCCTGCAACTGAAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CAA 90 bp CCACAACCGGCAGAAGCTGGGCTCGGTCGAGAGTTAATCCGGACTGAGAGCAGGACAGCACCAGAGGCGTaGGGCCTGGGCCTCGGCCAC +
Preference number: 5 (lower is better)
Translates to: PQPAEAGLGRELIRTESRTAPEA*GLGLGH
Trigger: GTGGCCGAGGCCCAGGCCCAACGCCTCTGGTGCTGT...CCTGCTCTCAGTCCGGATTAACTCTCGACCGAGCCCAGCTTCTGCCGGTTGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CAA 90 bp CGCTCCCTTTGTCCTTGTGGCTTTCCACGGGCAGGGGCGGTCCCAGCGAGATCGTTCTTGAGCAGCAGCTaGGCCCGTTCCTTCCTGCCG +
Preference number: 5 (lower is better)
Translates to: RSLCPCGFPRAGAVPARSFLSSS*ARSFLP
Trigger: CGGCAGGAAGGAACGGGCCAAGCTGCTGCTCAAGAA...CGATCTCGCTGGGACCGCCCCTGCCCGTGGAAAGCCACAAGGACAAAGGGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CAA 90 bp GCGAGGAGCAAGAGGAAGCGCGGGGACCCCAAGGTCTGGAGGTGTCTTCCTCACTGCCTGGGCCTGGCCTaGACAGGGACGTTTTCTGGG +
Preference number: 5 (lower is better)
Translates to: ARSKRKRGDPKVWRCLPHCLGLA*TGTFSG
Trigger: CCCAGAAAACGTCCCTGTCAAGGCCAGGCCCAGGCA...GTGAGGAAGACACCTCCAGACCTTGGGGTCCCCGCGCTTCCTCTTGCTCCTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS TCA 90 bp TGTCCCGCTGCTGCTTCAGTTGCAGGATGGCCTTGTCCTGCTCCGTaGCGCGGCTCTGCTTCTTGCGGCCGAACAGGTTACCCATGGCGG +
Preference number: 5 (lower is better)
Translates to: CPAAASVAGWPCPAP*RGSASCGRTGYPWR
Trigger: CCGCCATGGGTAACCTGTTCGGCCGCAAGAAGCAGAGCCGCGTCACGGAGCAGGACAAGGCCATCCTGCAACTGAAGCAGCAGCGGGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS TCA 90 bp CGTGACCCAAACTCTCTGTGGGCCACAGTCCCTGGGGCATCCCCGTaGGTCCCACAAGACGAGGCCACGTTACGAAGCTGCCACCAGCTC +
Preference number: 5 (lower is better)
Translates to: RDPNSLWATVPGASP*VPQDEATLRSCHQL
Trigger: GAGCTGGTGGCAGCTTCGTAACGTGGCCTCGTCTTGTGGGACTCACGGGGATGCCCCAGGGACTGTGGCCCACAGAGAGTTTGGGTCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CAA 90 bp CGGGGGAGCCCACAACCGGCAGAAGCTGGGCTCGGTCGAGAGTTAATCCGGACTCCGCTGCTGCTTCAGTaGCAGGATGGCCTTGTCCTG +
Preference number: 5 (lower is better)
Translates to: RGSPQPAEAGLGRELIRTPLLLQ*QDGLVL
Trigger: CAGGACAAGGCCATCCTGCAACTGAAGCAGCAGCGG...AGTCCGGATTAACTCTCGACCGAGCCCAGCTTCTGCCGGTTGTGGGCTCCCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CAA 90 bp CGGACTGAGAGCAGGCCAGTGGCGCCTGAGTGCGTTCAGGCTCAAGGTCTCCAGTGGTACTGCCTCAGCTaGTCCCGCTGCTGCTTCAGT +
Preference number: 5 (lower is better)
Translates to: RTESRPVAPECVQAQGLQWYCLS*SRCCFS
Trigger: ACTGAAGCAGCAGCGGGACAAGCTGAGGCAGTACCA...CTGGAGACCTTGAGCCTGAACGCACTCAGGCGCCACTGGCCTGCTCTCAGTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS GCA 90 bp TCCCACAAGACGAGGCCACGTTACGAAGCTGCCACCAGCTCCGCCTaGCTGGGCCTGGCCTTGACAGGGACGTTTTCTGGGATCTTCTCA +
Preference number: 5 (lower is better)
Translates to: SHKTRPRYEAATSSA*LGLALTGTFSGIFS
Trigger: TGAGAAGATCCCAGAAAACGTCCCTGTCAAGGCCAGGCCCAGGCAGGCGGAGCTGGTGGCAGCTTCGTAACGTGGCCTCGTCTTGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CAA 90 bp GAGAGCAGGCCAGTGGCGCCTGAGTGCGTTCAGGCTCAAGGTCTCCAGGAGACGTGGTATCGCTTCTTCTaGAGCAGCAGCTTGGCCCGT +
Preference number: 5 (lower is better)
Translates to: ESRPVAPECVQAQGLQETWYRFF*SSSLAR
Trigger: ACGGGCCAAGCTGCTGCTCAAGAAGAAGCGATACCA...CGTCTCCTGGAGACCTTGAGCCTGAACGCACTCAGGCGCCACTGGCCTGCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CAA 90 bp CAGGGGCGGTCCCAGCGAGATCGTCTCATAACCAAACCAGCCCTGTGCACGAGAAGGTGGCCGCTCCCTTaGTCCTTGTGGCTTTCCACG +
Preference number: 5 (lower is better)
Translates to: QGRSQRDRLITKPALCTRRWPLP*SLWLST
Trigger: CGTGGAAAGCCACAAGGACAAAGGGAGCGGCCACCT...TCTCGTGCACAGGGCTGGTTTGGTTATGAGACGATCTCGCTGGGACCGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS GCA 90 bp ATGGCCTCCAGGCTGCTGATCTGGTTCTCCGTCCTGTCCAGGAGCTaGTCCTGGTATCGCTTCTTCTTGAGCAGCAGCTTGGCCCGTTCC +
Preference number: 5 (lower is better)
Translates to: MASRLLIWFSVLSRS*SWYRFFLSSSLARS
Trigger: GGAACGGGCCAAGCTGCTGCTCAAGAAGAAGCGATACCAGGAGCAGCTCCTGGACAGGACGGAGAACCAGATCAGCAGCCTGGAGGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325167.9
ENST00000571457.1
ENST00000572525.5
ENST00000572778.5
CDS GCA 90 bp CAGCTCCTCCAGGATGGCGTCTTCATCCTCCTGAGTGAAGCTTCCTaGCAGGAGCTCGTCTATTTGCCGCTGGTACTCCACGGCCTCCTG +
Preference number: 5 (lower is better)
Translates to: QLLQDGVFILLSEAS*QELVYLPLVLHGLL
Trigger: CAGGAGGCCGTGGAGTACCAGCGGCAAATAGACGAGCTCCTGGCAGGAAGCTTCACTCAGGAGGATGAAGACGCCATCCTGGAGGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325167.9
ENST00000571457.1
ENST00000572525.5
ENST00000572778.5
CDS-3UTR CAA 90 bp GGTCTCCAGGAGACGCTCTGGAGTCCTCCTGCAATGCGCCTGCGTGGCTGCAGCCTCTGGCAGCTCTATTaGTTCCTGAGTGATTGCGCT +
Preference number: 5 (lower is better)
Translates to: GLQETLWSPPAMRLRGCSLWQLY*FLSDCA
Trigger: AGCGCAATCACTCAGGAACAAATAGAGCTGCCAGAG...GCTGCAGCCACGCAGGCGCATTGCAGGAGGACTCCAGAGCGTCTCCTGGAGACC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CAA 90 bp AAGGTCTGGAGGTGTCTTCCTCACAGACGAGCGCGAGCCACGCGGGGCTGGGACATCACCTGGTGCATCTaGTTCAGACACTCATTTCCA +
Preference number: 5 (lower is better)
Translates to: KVWRCLPHRRARATRGWDITWCI*FRHSFP
Trigger: TGGAAATGAGTGTCTGAACAAGATGCACCAGGTGAT...GTCCCAGCCCCGCGTGGCTCGCGCTCGTCTGTGAGGAAGACACCTCCAGACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS-3UTR CAA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGGCCAGGCAGCAGGGCTaGCCCACGGCCCAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQARQQG*PTAQEG
Trigger: GCCTTCCTGGGCCGTGGGCAAGCCCTGCTGCCTGGC...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS CCA 90 bp TCCTGCGAATTCCAACCATTCAAAAGAATCAAACATGGAAATACCTaGGATCTTCTCAGGAAGGGGCTCGGAGGGAACCTCTGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: SCEFQPFKRIKHGNT*DLLRKGLGGNLWQL
Trigger: GAGCTGCCAGAGGTTCCCTCCGAGCCCCTTCCTGAGAAGATCCCAGGTATTTCCATGTTTGATTCTTTTGAATGGTTGGAATTCGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR CAA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGTGGTACTGCCTCAGCTaGTCCCGCTGCTGCTTCAGT +
Preference number: 5 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQWYCLS*SRCCFS
Trigger: ACTGAAGCAGCAGCGGGACAAGCTGAGGCAGTACCA...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR CAA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGTGGTATCGCTTCTTCTaGAGCAGCAGCTTGGCCCGT +
Preference number: 5 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQWYRFF*SSSLAR
Trigger: ACGGGCCAAGCTGCTGCTCAAGAAGAAGCGATACCA...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR CAA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGGGCTCTCTTATGAGGTaGCCCAGTTACCGAACCCCT +
Preference number: 5 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQGSLMR*PSYRTP
Trigger: AGGGGTTCGGTAACTGGGCAACCTCATAAGAGAGCC...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS-3UTR CAA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGCTCTGGCAGCTCTATTaGTTCCTGAGTGATTGCGCT +
Preference number: 5 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQLWQLY*FLSDCA
Trigger: AGCGCAATCACTCAGGAACAAATAGAGCTGCCAGAG...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS GCA 90 bp ATGGACATCACCTGGTGCATCTTGTTCAGACACTCATTTCCAAACTaGAGCCCCTCCATCACTTTCATTTCGATCTGGGTGAACTCAATA +
Preference number: 5 (lower is better)
Translates to: MDITWCILFRHSFPN*SPSITFISIWVNSI
Trigger: TATTGAGTTCACCCAGATCGAAATGAAAGTGATGGAGGGGCTGCAGTTTGGAAATGAGTGTCTGAACAAGATGCACCAGGTGATGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325167.9
ENST00000571457.1
ENST00000572525.5
ENST00000572778.5
CDS-3UTR CAA 90 bp ATTTCTGAATGTGTCTCTTTGAATGGGGTATGGCTCTCTTATGAGGTTGCCCAGATCACCTGGTGCATCTaGTTCAGACACTCATTTCCA +
Preference number: 5 (lower is better)
Translates to: ISECVSLNGVWLSYEVAQITWCI*FRHSFP
Trigger: TGGAAATGAGTGTCTGAACAAGATGCACCAGGTGAT...CTGGGCAACCTCATAAGAGAGCCATACCCCATTCAAAGAGACACATTCAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS CCA 72 bp GCGGCCGAACAGGTTACCCATGGCGGCGCCCGCCCCTaGCCCGGGACCCACCAAGTCCAATCGCCACCGCCG +
Preference number: 6 (lower is better)
Translates to: AAEQVTHGGARP*PGTHQVQSPPP
Trigger: CGGCGGTGGCGATTGGACTTGGTGGGTCCCGGGCCAGGGGCGGGCGCCGCCATGGGTAACCTGTTCGGCCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS CCA 72 bp CGCGGCTCTGCTTCTTGCGGCCGAACAGGTTACCCATaGCGGCGCCCGCCCCTGGCCCGGGACCCACCAAGT +
Preference number: 6 (lower is better)
Translates to: RGSASCGRTGYP*RRPPLARDPPS
Trigger: ACTTGGTGGGTCCCGGGCCAGGGGCGGGCGCCGCCATGGGTAACCTGTTCGGCCGCAAGAAGCAGAGCCGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS CAA 90 bp AGTTGCAGGATGGCCTTGTCCTGCTCCGTGACGCGGCTCTGCTTCTaGCGGCCGAACAGGTTACCCATGGCGGCGCCCGCCCCTGGCCCG +
Preference number: 6 (lower is better)
Translates to: SCRMALSCSVTRLCF*RPNRLPMAAPAPGP
Trigger: CGGGCCAGGGGCGGGCGCCGCCATGGGTAACCTGTTCGGCCGCAAGAAGCAGAGCCGCGTCACGGAGCAGGACAAGGCCATCCTGCAACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS CCA 72 bp AGCTGCCGGGCCAGGGCGCGCTCGCGCTCCAGCTGCTaGGCGATCCTCTTCTGGTACTGCCTCAGCTTGTCC +
Preference number: 6 (lower is better)
Translates to: SCRARARSRSSC*AILFWYCLSLS
Trigger: GGACAAGCTGAGGCAGTACCAGAAGAGGATCGCCCAGCAGCTGGAGCGCGAGCGCGCCCTGGCCCGGCAGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325167.9
ENST00000572525.5
ENST00000572778.5
CDS CAA 90 bp GGCCAGGCACGCACGCCCCCAAGCCAAACAGCCAGGCAGCAGGGCTaGCCCACGGCCCAGGAAGGCCTGGGAGCATTCTGTCTTGTTCCC +
Preference number: 6 (lower is better)
Translates to: GQARTPPSQTARQQG*PTAQEGLGAFCLVP
Trigger: GGGAACAAGACAGAATGCTCCCAGGCCTTCCTGGGCCGTGGGCAAGCCCTGCTGCCTGGCTGTTTGGCTTGGGGGCGTGCGTGCCTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572778.5
CDS CAA 72 bp ATGGCCTTGTCCTGCTCCGTGACGCGGCTCTGCTTCTaGCGGCCGAACAGGTTACCCATGGCGGCGCCCGCC +
Preference number: 6 (lower is better)
Translates to: MALSCSVTRLCF*RPNRLPMAAPA
Trigger: GGCGGGCGCCGCCATGGGTAACCTGTTCGGCCGCAAGAAGCAGAGCCGCGTCACGGAGCAGGACAAGGCCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS GCA 72 bp TGCAGGATGGCCTTGTCCTGCTCCGTGACGCGGCTCTaGTTCTTGCGGCCGAACAGGTTACCCATGGCGGCG +
Preference number: 6 (lower is better)
Translates to: CRMALSCSVTRL*FLRPNRLPMAA
Trigger: CGCCGCCATGGGTAACCTGTTCGGCCGCAAGAAGCAGAGCCGCGTCACGGAGCAGGACAAGGCCATCCTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS CCA 72 bp GCGCGCTCGCGCTCCAGCTGCTGGGCGATCCTCTTCTaGTACTGCCTCAGCTTGTCCCGCTGCTGCTTCAGT +
Preference number: 6 (lower is better)
Translates to: ARSRSSCWAILF*YCLSLSRCCFS
Trigger: ACTGAAGCAGCAGCGGGACAAGCTGAGGCAGTACCAGAAGAGGATCGCCCAGCAGCTGGAGCGCGAGCGCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325167.9
ENST00000572525.5
ENST00000572778.5
CDS CAA 90 bp TCGCGCTCCAGCTGCTGGGCGATCCTCTTCTGGTACTGCCTCAGCTaGTCCCGCTGCTGCTTCAGTTGCAGGATGGCCTTGTCCTGCTCC +
Preference number: 6 (lower is better)
Translates to: SRSSCWAILFWYCLS*SRCCFSCRMALSCS
Trigger: GGAGCAGGACAAGGCCATCCTGCAACTGAAGCAGCAGCGGGACAAGCTGAGGCAGTACCAGAAGAGGATCGCCCAGCAGCTGGAGCGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS CAA 90 bp TGGTTCTCCGTCCTGTCCAGGAGCTGCTCCTGGTATCGCTTCTTCTaGAGCAGCAGCTTGGCCCGTTCCTTCCTGCCGTCCCGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: WFSVLSRSCSWYRFF*SSSLARSFLPSRSS
Trigger: GCTGCTGCGGGACGGCAGGAAGGAACGGGCCAAGCTGCTGCTCAAGAAGAAGCGATACCAGGAGCAGCTCCTGGACAGGACGGAGAACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325167.9
ENST00000571457.1
ENST00000572525.5
ENST00000572778.5
CDS CAA 90 bp TCGCGCTCCAGCTGCTGGGCGATCCTCTTCTGGTACTGCCTCAGCTaGTCCCGCTGCTGCTTCAGTTGCTGGATGTTAGGGCCCGCGATG +
Preference number: 6 (lower is better)
Translates to: SRSSCWAILFWYCLS*SRCCFSCWMLGPAM
Trigger: CATCGCGGGCCCTAACATCCAGCAACTGAAGCAGCAGCGGGACAAGCTGAGGCAGTACCAGAAGAGGATCGCCCAGCAGCTGGAGCGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572525.5
CDS TCA 72 bp AACTCTCTGTGGGCCACAGTCCCTGGGGCATCCCCGTaGGTCCCACAAGACGAGGCCACGTTACGAAGCTGC +
Preference number: 6 (lower is better)
Translates to: NSLWATVPGASP*VPQDEATLRSC
Trigger: GCAGCTTCGTAACGTGGCCTCGTCTTGTGGGACTCACGGGGATGCCCCAGGGACTGTGGCCCACAGAGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS GCA 72 bp TCGCGCTCCAGCTGCTGGGCGATCCTCTTCTGGTACTaGCTCAGCTTGTCCCGCTGCTGCTTCAGTTGCAGG +
Preference number: 6 (lower is better)
Translates to: SRSSCWAILFWY*LSLSRCCFSCR
Trigger: CCTGCAACTGAAGCAGCAGCGGGACAAGCTGAGGCAGTACCAGAAGAGGATCGCCCAGCAGCTGGAGCGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS GCA 72 bp TCGCGCTCCAGCTGCTGGGCGATCCTCTTCTGGTACTaGCTCAGCTTGTCCCGCTGCTGCTTCAGTTGCTGG +
Preference number: 6 (lower is better)
Translates to: SRSSCWAILFWY*LSLSRCCFSCW
Trigger: CCAGCAACTGAAGCAGCAGCGGGACAAGCTGAGGCAGTACCAGAAGAGGATCGCCCAGCAGCTGGAGCGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572525.5
CDS TCA 72 bp GCTGCTTCAGTTGCAGGATGGCCTTGTCCTGCTCCGTaGCGCGGCTCTGCTTCTTGCGGCCGAACAGGTTAC +
Preference number: 6 (lower is better)
Translates to: AASVAGWPCPAP*RGSASCGRTGY
Trigger: GTAACCTGTTCGGCCGCAAGAAGCAGAGCCGCGTCACGGAGCAGGACAAGGCCATCCTGCAACTGAAGCAGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS CAA 72 bp GTCCTGTCCAGGAGCTGCTCCTGGTATCGCTTCTTCTaGAGCAGCAGCTTGGCCCGTTCCTTCCTGCCGTCC +
Preference number: 6 (lower is better)
Translates to: VLSRSCSWYRFF*SSSLARSFLPS
Trigger: GGACGGCAGGAAGGAACGGGCCAAGCTGCTGCTCAAGAAGAAGCGATACCAGGAGCAGCTCCTGGACAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325167.9
ENST00000571457.1
ENST00000572525.5
ENST00000572778.5
CDS CAA 72 bp AGCTGCTGGGCGATCCTCTTCTGGTACTGCCTCAGCTaGTCCCGCTGCTGCTTCAGTTGCAGGATGGCCTTG +
Preference number: 6 (lower is better)
Translates to: SCWAILFWYCLS*SRCCFSCRMAL
Trigger: CAAGGCCATCCTGCAACTGAAGCAGCAGCGGGACAAGCTGAGGCAGTACCAGAAGAGGATCGCCCAGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325167.9
CDS TCA 72 bp GCGCTCAGCTCCTCCAGGATGGCGTCTTCATCCTCCTaGGTGAAGCTTCCTGCCAGGAGCTCGTCTATTTGC +
Preference number: 6 (lower is better)
Translates to: ALSSSRMASSSS*VKLPARSSSIC
Trigger: GCAAATAGACGAGCTCCTGGCAGGAAGCTTCACTCAGGAGGATGAAGACGCCATCCTGGAGGAGCTGAGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325167.9
ENST00000571457.1
ENST00000572525.5
ENST00000572778.5
CDS GCA 72 bp AGCTCGTCTATTTGCCGCTGGTACTCCACGGCCTCCTaGGTCTCGTCCAGGATCCTCTCCACCTCTTCAATG +
Preference number: 6 (lower is better)
Translates to: SSSICRWYSTAS*VSSRILSTSSM
Trigger: CATTGAAGAGGTGGAGAGGATCCTGGACGAGACGCAGGAGGCCGTGGAGTACCAGCGGCAAATAGACGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325167.9
ENST00000571457.1
ENST00000572525.5
ENST00000572778.5
CDS CCA 72 bp CTGATCTGGTTCTCCGTCCTGTCCAGGAGCTGCTCCTaGTATCGCTTCTTCTTGAGCAGCAGCTTGGCCCGT +
Preference number: 6 (lower is better)
Translates to: LIWFSVLSRSCS*YRFFLSSSLAR
Trigger: ACGGGCCAAGCTGCTGCTCAAGAAGAAGCGATACCAGGAGCAGCTCCTGGACAGGACGGAGAACCAGATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325167.9
ENST00000571457.1
ENST00000572525.5
ENST00000572778.5
CDS CAA 72 bp AGCTGCTGGGCGATCCTCTTCTGGTACTGCCTCAGCTaGTCCCGCTGCTGCTTCAGTTGCTGGATGTTAGGG +
Preference number: 6 (lower is better)
Translates to: SCWAILFWYCLS*SRCCFSCWMLG
Trigger: CCCTAACATCCAGCAACTGAAGCAGCAGCGGGACAAGCTGAGGCAGTACCAGAAGAGGATCGCCCAGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572525.5
CDS TCA 72 bp TCAGCTCCTCCAGGATGGCGTCTTCATCCTCCTGAGTaGAGCTTCCTGCCAGGAGCTCGTCTATTTGCCGCT +
Preference number: 6 (lower is better)
Translates to: SAPPGWRLHPPE*SFLPGARLFAA
Trigger: AGCGGCAAATAGACGAGCTCCTGGCAGGAAGCTTCACTCAGGAGGATGAAGACGCCATCCTGGAGGAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325167.9
ENST00000571457.1
ENST00000572525.5
ENST00000572778.5
CDS GCA 72 bp AGGCTGCTGATCTGGTTCTCCGTCCTGTCCAGGAGCTaGTCCTGGTATCGCTTCTTCTTGAGCAGCAGCTTG +
Preference number: 6 (lower is better)
Translates to: RLLIWFSVLSRS*SWYRFFLSSSL
Trigger: CAAGCTGCTGCTCAAGAAGAAGCGATACCAGGAGCAGCTCCTGGACAGGACGGAGAACCAGATCAGCAGCCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325167.9
ENST00000571457.1
ENST00000572525.5
ENST00000572778.5
CDS GCA 72 bp CAGGATGGCGTCTTCATCCTCCTGAGTGAAGCTTCCTaGCAGGAGCTCGTCTATTTGCCGCTGGTACTCCAC +
Preference number: 6 (lower is better)
Translates to: QDGVFILLSEAS*QELVYLPLVLH
Trigger: GTGGAGTACCAGCGGCAAATAGACGAGCTCCTGGCAGGAAGCTTCACTCAGGAGGATGAAGACGCCATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325167.9
ENST00000571457.1
ENST00000572525.5
ENST00000572778.5
CDS CCA 72 bp TGGGATCTTCTCAGGAAGGGGCTCGGAGGGAACCTCTaGCAGCTCTATTTGTTCCTGAGTGATTGCGCTCAG +
Preference number: 6 (lower is better)
Translates to: WDLLRKGLGGNL*QLYLFLSDCAQ
Trigger: CTGAGCGCAATCACTCAGGAACAAATAGAGCTGCCAGAGGTTCCCTCCGAGCCCCTTCCTGAGAAGATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325167.9
ENST00000571457.1
ENST00000572525.5
ENST00000572778.5
CDS TCA 72 bp GTTTTAGCTTTCCGTGTTTCTGTGCAGTTCCGTAACTaGGGCCCATCCTGGGGCAAAGCTGGGATCTTCTCA +
Preference number: 6 (lower is better)
Translates to: VLAFRVSVQFRN*GPSWGKAGIFS
Trigger: TGAGAAGATCCCAGCTTTGCCCCAGGATGGGCCTCAGTTACGGAACTGCACAGAAACACGGAAAGCTAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571457.1
CDS GCA 72 bp ACCTGGTGCATCTTGTTCAGACACTCATTTCCAAACTaGAGCCCCTCCATCACTTTCATTTCGATCTGGGTG +
Preference number: 6 (lower is better)
Translates to: TWCILFRHSFPN*SPSITFISIWV
Trigger: CACCCAGATCGAAATGAAAGTGATGGAGGGGCTGCAGTTTGGAAATGAGTGTCTGAACAAGATGCACCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325167.9
ENST00000571457.1
ENST00000572525.5
ENST00000572778.5
CDS CCA 72 bp TTCCAACCATTCAAAAGAATCAAACATGGAAATACCTaGGATCTTCTCAGGAAGGGGCTCGGAGGGAACCTC +
Preference number: 6 (lower is better)
Translates to: FQPFKRIKHGNT*DLLRKGLGGNL
Trigger: GAGGTTCCCTCCGAGCCCCTTCCTGAGAAGATCCCAGGTATTTCCATGTTTGATTCTTTTGAATGGTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572778.5