Pregenerated sensors for CHMP5 (Homo sapiens)
Ensembl gene IDs: ENSG00000086065Ensembl transcript IDs: ENST00000223500.9, ENST00000419016.6
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGTTTGATCTGCAGACACATGAGAGTCAGGTGCACATAGCACTGTaGGGCACCCAGCTAGGCTGGAGGGGCCATGCTGTTGGCAACAAG | + |
|
Preference number: 1 (lower is better) Translates to: WFDLQTHESQVHIAL*GTQLGWRGHAVGNK Trigger: CTTGTTGCCAACAGCATGGCCCCTCCAGCCTAGCTGGGTGCCTCACAGTGCTATGTGCACCTGACTCTCATGTGTCTGCAGATCAAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| 3UTR TCA 90 bp | CACCCAGCTAGGCTGGAGGGGCCATGCTGTTGGCAACAAGTTGAATaGGGAAGGGAGGACAGGATCATTAAAGACCCTGAAATTGGGCAG | + |
|
Preference number: 1 (lower is better) Translates to: HPARLEGPCCWQQVE*GREDRIIKDPEIGQ Trigger: CTGCCCAATTTCAGGGTCTTTAATGATCCTGTCCTCCCTTCCTCATTCAACTTGTTGCCAACAGCATGGCCCCTCCAGCCTAGCTGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| 3UTR-3UTR TCA 90 bp | ACCCAGCTAGGCTGGAGGGGCCATGCTGTTGGCAACAAGTTGAATGAGGAAGGGAATTGGGCAGGAGTTTaGACTTGCTGTAGTACTCCA | + |
|
Preference number: 2 (lower is better) Translates to: TQLGWRGHAVGNKLNEEGNWAGV*TCCSTP Trigger: TGGAGTACTACAGCAAGTTCAAACTCCTGCCCAATT...CCCTTCCTCATTCAACTTGTTGCCAACAGCATGGCCCCTCCAGCCTAGCTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| 3UTR-3UTR CCA 90 bp | CTAAATGTTTATTGGTTTGATCTGCAGACACATGAGAGTCAGGTGCACATAGCAGGCACCCAGCTAGGCTaGAGGGGCCATGCTGTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: LNVYWFDLQTHESQVHIAGTQLG*RGHAVG Trigger: GCCAACAGCATGGCCCCTCCAGCCTAGCTGGGTGCC...TGCTATGTGCACCTGACTCTCATGTGTCTGCAGATCAAACCAATAAACATTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| 3UTR-3UTR TCA 90 bp | ACCCAGCTAGGCTGGAGGGGCCATGCTGTTGGCAACAAGTTGAATGAGGAAGGGCTCACAAAAGCTCTGTaGGTTAAGCATGATTTTACT | + |
|
Preference number: 2 (lower is better) Translates to: TQLGWRGHAVGNKLNEEGLTKAL*VKHDFT Trigger: AGTAAAATCATGCTTAACTCACAGAGCTTTTGTGAG...CCCTTCCTCATTCAACTTGTTGCCAACAGCATGGCCCCTCCAGCCTAGCTGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| 3UTR-3UTR GCA 90 bp | CTAAATGTTTATTGGTTTGATCTGCAGACACATGAGAGTCAGGTGCACATAGCAAGGCTGGAGGGGCCATaGTGTTGGCAACAAGTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: LNVYWFDLQTHESQVHIARLEGP*CWQQVE Trigger: TTCAACTTGTTGCCAACAGCATGGCCCCTCCAGCCT...TGCTATGTGCACCTGACTCTCATGTGTCTGCAGATCAAACCAATAAACATTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| 3UTR-3UTR TCA 90 bp | AATGAGGAAGGGAGGACAGGATCATTAAAGACCCTGAAATTGGGCAGGAGTTTGCTCACAAAAGCTCTGTaGGTTAAGCATGATTTTACT | + |
|
Preference number: 2 (lower is better) Translates to: NEEGRTGSLKTLKLGRSLLTKAL*VKHDFT Trigger: AGTAAAATCATGCTTAACTCACAGAGCTTTTGTGAG...CAAACTCCTGCCCAATTTCAGGGTCTTTAATGATCCTGTCCTCCCTTCCTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| 3UTR-3UTR GCA 90 bp | GAGGACAGGATCATTAAAGACCCTGAAATTGGGCAGGAGTTTGAACTTGCTGTAGCTCTTTCCTCACAATaGTACTGGTTAATTTGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: EDRIIKDPEIGQEFELAVALSSQ*YWLIWF Trigger: AAACCAAATTAACCAGTAGCATTGTGAGGAAAGAGC...TACAGCAAGTTCAAACTCCTGCCCAATTTCAGGGTCTTTAATGATCCTGTCCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| 3UTR TCA 72 bp | CTGCAGACACATGAGAGTCAGGTGCACATAGCACTGTaGGGCACCCAGCTAGGCTGGAGGGGCCATGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LQTHESQVHIAL*GTQLGWRGHAV Trigger: AACAGCATGGCCCCTCCAGCCTAGCTGGGTGCCTCACAGTGCTATGTGCACCTGACTCTCATGTGTCTGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| 3UTR-3UTR CAA 90 bp | ACCCAGCTAGGCTGGAGGGGCCATGCTGTTGGCAACAAGTTGAATGAGGAAGGGTTAAAGACCCTGAAATaGGGCAGGAGTTTGAACTTG | + |
|
Preference number: 3 (lower is better) Translates to: TQLGWRGHAVGNKLNEEGLKTLK*GRSLNL Trigger: CAAGTTCAAACTCCTGCCCAATTTCAGGGTCTTTAA...CCCTTCCTCATTCAACTTGTTGCCAACAGCATGGCCCCTCCAGCCTAGCTGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| 3UTR-3UTR CAA 90 bp | GACCATTACCTCAATTATTCCTCACAAAAGCTCTGTGAGTTAAGCATGATTTTAGGGCCCAAGCCCAGATaGTTCCTTGCTCTTTCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: DHYLNYSSQKLCELSMILGPKPR*FLALSS Trigger: TGAGGAAAGAGCAAGGAACAATCTGGGCTTGGGCCC...TAAAATCATGCTTAACTCACAGAGCTTTTGTGAGGAATAATTGAGGTAATGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| 3UTR-3UTR CAA 90 bp | AATGAGGAAGGGAGGACAGGATCATTAAAGACCCTGAAATTGGGCAGGAGTTTGATGCTACTGGTTAATTaGGTTTCTGTAGTGGAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: NEEGRTGSLKTLKLGRSLMLLVN*VSVVEL Trigger: TAACTCCACTACAGAAACCAAATTAACCAGTAGCAT...CAAACTCCTGCCCAATTTCAGGGTCTTTAATGATCCTGTCCTCCCTTCCTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| 3UTR-3UTR CAA 90 bp | TTCCTAAATGTTTATTGGTTTGATCTGCAGACACATGAGAGTCAGGTGCACATATATAAGAATAGCCCCTaGCAGTTAACAAGGTACTTA | + |
|
Preference number: 3 (lower is better) Translates to: FLNVYWFDLQTHESQVHIYKNSP*QLTRYL Trigger: TAAGTACCTTGTTAACTGCAAGGGGCTATTCTTATA...TATGTGCACCTGACTCTCATGTGTCTGCAGATCAAACCAATAAACATTTAGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| CDS-3UTR CCA 90 bp | GACCCAGGGCCCAAGCCCAGATTGTTCCTTGCTCTTTCCTCACAATGCTACTGGGGCACCCAGCTAGGCTaGAGGGGCCATGCTGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: DPGPKPRLFLALSSQCYWGTQLG*RGHAVG Trigger: GCCAACAGCATGGCCCCTCCAGCCTAGCTGGGTGCC...CCAGTAGCATTGTGAGGAAAGAGCAAGGAACAATCTGGGCTTGGGCCCTGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| CDS-3UTR TCA 90 bp | ACCCAGCTAGGCTGGAGGGGCCATGCTGTTGGCAACAAGTTGAATGAGGAAGGGGTGCACATAGCACTGTaGGGCACCCAGCTAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TQLGWRGHAVGNKLNEEGVHIAL*GTQLGW Trigger: CCAGCCTAGCTGGGTGCCTCACAGTGCTATGTGCAC...CCCTTCCTCATTCAACTTGTTGCCAACAGCATGGCCCCTCCAGCCTAGCTGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| CDS-3UTR GCA 90 bp | ACCCAGCTAGGCTGGAGGGGCCATGCTGTTGGCAACAAGTTGAATGAGGAAGGGAGGCTGGAGGGGCCATaGTGTTGGCAACAAGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TQLGWRGHAVGNKLNEEGRLEGP*CWQQVE Trigger: TTCAACTTGTTGCCAACAGCATGGCCCCTCCAGCCT...CCCTTCCTCATTCAACTTGTTGCCAACAGCATGGCCCCTCCAGCCTAGCTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| CDS-3UTR GCA 90 bp | TTAGTAAATGGTAGACCCAGGGCCCAAGCCCAGATTGTTCCTTGCTCTTTCCTCCTTCCGGCCCCTCCGTaGGCAAGCGCAATATGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVNGRPRAQAQIVPCSFLLPAPP*ASAICL Trigger: GAGGCATATTGCGCTTGCGCACGGAGGGGCCGGAAG...GAGGAAAGAGCAAGGAACAATCTGGGCTTGGGCCCTGGGTCTACCATTTACTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419016.6 |
||
| CDS-3UTR TCA 90 bp | ACCCAGCTAGGCTGGAGGGGCCATGCTGTTGGCAACAAGTTGAATGAGGAAGGGTGGCAACAAGTTGAATaGGGAAGGGAGGACAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: TQLGWRGHAVGNKLNEEGWQQVE*GREDRI Trigger: GATCCTGTCCTCCCTTCCTCATTCAACTTGTTGCCA...CCCTTCCTCATTCAACTTGTTGCCAACAGCATGGCCCCTCCAGCCTAGCTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| CDS-3UTR TCA 90 bp | CCAGGGCCCAAGCCCAGATTGTTCCTTGCTCTTTCCTCACAATGCTACTGGTTAAGAGTCGGTTCATCTTaGGCAGCCGCGAAGAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: PGPKPRLFLALSSQCYWLRVGSS*AAAKKP Trigger: GGGTTTCTTCGCGGCTGCTCAAGATGAACCGACTCT...TAACCAGTAGCATTGTGAGGAAAGAGCAAGGAACAATCTGGGCTTGGGCCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| CDS-3UTR TCA 90 bp | GACCCAGGGCCCAAGCCCAGATTGTTCCTTGCTCTTTCCTCACAATGCTACTGGTGGCAACAAGTTGAATaGGGAAGGGAGGACAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: DPGPKPRLFLALSSQCYWWQQVE*GREDRI Trigger: GATCCTGTCCTCCCTTCCTCATTCAACTTGTTGCCA...CCAGTAGCATTGTGAGGAAAGAGCAAGGAACAATCTGGGCTTGGGCCCTGGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| CDS-3UTR GCA 90 bp | CCAGGGCCCAAGCCCAGATTGTTCCTTGCTCTTTCCTCACAATGCTACTGGTTATGCGCAAGCGCAATATaGCTCCTGGCGTTTCCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: PGPKPRLFLALSSQCYWLCASAI*LLAFPD Trigger: ATCGGGAAACGCCAGGAGGCATATTGCGCTTGCGCA...TAACCAGTAGCATTGTGAGGAAAGAGCAAGGAACAATCTGGGCTTGGGCCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419016.6 |
||
| CDS-3UTR CCA 90 bp | ATGGTAGACCCAGGGCCCAAGCCCAGATTGTTCCTTGCTCTTTCCTCACAATGCGAGAGCAAAAGGACTTaGTGCTCTCGGAGAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: MVDPGPKPRLFLALSSQCESKRT*CSRREP Trigger: AGGCTCTCTCCGAGAGCACCAAGTCCTTTTGCTCTC...GCATTGTGAGGAAAGAGCAAGGAACAATCTGGGCTTGGGCCCTGGGTCTACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419016.6 |
||
| CDS-3UTR TCA 90 bp | TTAGTAAATGGTAGACCCAGGGCCCAAGCCCAGATTGTTCCTTGCTCTTTCCTCAGAGTCGGTTCATCTTaGGCAGCCGCGAAGAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: LVNGRPRAQAQIVPCSFLRVGSS*AAAKKP Trigger: GGGTTTCTTCGCGGCTGCTCAAGATGAACCGACTCT...GAGGAAAGAGCAAGGAACAATCTGGGCTTGGGCCCTGGGTCTACCATTTACTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| CDS-3UTR TCA 90 bp | AATGAGGAAGGGAGGACAGGATCATTAAAGACCCTGAAATTGGGCAGGAGTTTGGTGCACATAGCACTGTaGGGCACCCAGCTAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NEEGRTGSLKTLKLGRSLVHIAL*GTQLGW Trigger: CCAGCCTAGCTGGGTGCCTCACAGTGCTATGTGCAC...CAAACTCCTGCCCAATTTCAGGGTCTTTAATGATCCTGTCCTCCCTTCCTCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| CDS-3UTR CCA 90 bp | TTTGAACTTGCTGTAGTACTCCAGGCACCTTCCAAGAAAAGAATGAAGCAGTTTGGCACCCAGCTAGGCTaGAGGGGCCATGCTGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FELAVVLQAPSKKRMKQFGTQLG*RGHAVG Trigger: GCCAACAGCATGGCCCCTCCAGCCTAGCTGGGTGCC...AAACTGCTTCATTCTTTTCTTGGAAGGTGCCTGGAGTACTACAGCAAGTTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| CDS-3UTR GCA 90 bp | GACCCAGGGCCCAAGCCCAGATTGTTCCTTGCTCTTTCCTCACAATGCTACTGGCTTGACCATATTCTTTaGAGGACCCTCTCTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: DPGPKPRLFLALSSQCYWLDHIL*RTLSHL Trigger: AAGATGAGAGAGGGTCCTGCAAAGAATATGGTCAAG...CCAGTAGCATTGTGAGGAAAGAGCAAGGAACAATCTGGGCTTGGGCCCTGGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| CDS-3UTR GCA 90 bp | CCAGGGCCCAAGCCCAGATTGTTCCTTGCTCTTTCCTCACAATGCTACTGGTTAAGATTGTCCCGCTGCTaGTCATACATCCTCTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PGPKPRLFLALSSQCYWLRLSRC*SYILFC Trigger: GCAAAAGAGGATGTATGAGCAGCAGCGGGACAATCT...TAACCAGTAGCATTGTGAGGAAAGAGCAAGGAACAATCTGGGCTTGGGCCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| CDS-3UTR CCA 90 bp | CCAGGGCCCAAGCCCAGATTGTTCCTTGCTCTTTCCTCACAATGCTACTGGTTAGCGCAATATGCCTCCTaGCGTTTCCCGATTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PGPKPRLFLALSSQCYWLAQYAS*RFPILF Trigger: AAAAAGAATCGGGAAACGCCAGGAGGCATATTGCGC...TAACCAGTAGCATTGTGAGGAAAGAGCAAGGAACAATCTGGGCTTGGGCCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419016.6 |
||
| CDS-3UTR CCA 90 bp | GAGGACAGGATCATTAAAGACCCTGAAATTGGGCAGGAGTTTGAACTTGCTGTACGGGTCTTCCGGGGATaGAGAGCAAAAGGACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EDRIIKDPEIGQEFELAVRVFRG*RAKGLG Trigger: ACCAAGTCCTTTTGCTCTCCATCCCCGGAAGACCCG...TACAGCAAGTTCAAACTCCTGCCCAATTTCAGGGTCTTTAATGATCCTGTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419016.6 |
||
| CDS-3UTR GCA 90 bp | TTAGTAAATGGTAGACCCAGGGCCCAAGCCCAGATTGTTCCTTGCTCTTTCCTCGCCCAGATTGTTCCTTaGTCTTTCCTCACAATGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LVNGRPRAQAQIVPCSFLAQIVP*SFLTML Trigger: TAGCATTGTGAGGAAAGAGCAAGGAACAATCTGGGC...GAGGAAAGAGCAAGGAACAATCTGGGCTTGGGCCCTGGGTCTACCATTTACTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| CDS-3UTR GCA 90 bp | GAGGACAGGATCATTAAAGACCCTGAAATTGGGCAGGAGTTTGAACTTGCTGTAAGCAAAAGGACTTGGTaGTCTCGGAGAGAGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: EDRIIKDPEIGQEFELAVSKRTW*SRREPA Trigger: TGCAGGCTCTCTCCGAGAGCACCAAGTCCTTTTGCT...TACAGCAAGTTCAAACTCCTGCCCAATTTCAGGGTCTTTAATGATCCTGTCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419016.6 |
||
| CDS-3UTR TCA 90 bp | ATGGTAGACCCAGGGCCCAAGCCCAGATTGTTCCTTGCTCTTTCCTCACAATGCCTCACAAAAGCTCTGTaGGTTAAGCATGATTTTACT | + |
|
Preference number: 4 (lower is better) Translates to: MVDPGPKPRLFLALSSQCLTKAL*VKHDFT Trigger: AGTAAAATCATGCTTAACTCACAGAGCTTTTGTGAG...GCATTGTGAGGAAAGAGCAAGGAACAATCTGGGCTTGGGCCCTGGGTCTACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| CDS-3UTR GCA 90 bp | AATGAGGAAGGGAGGACAGGATCATTAAAGACCCTGAAATTGGGCAGGAGTTTGAGATTGTCCCGCTGCTaGTCATACATCCTCTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NEEGRTGSLKTLKLGRSLRLSRC*SYILFC Trigger: GCAAAAGAGGATGTATGAGCAGCAGCGGGACAATCT...CAAACTCCTGCCCAATTTCAGGGTCTTTAATGATCCTGTCCTCCCTTCCTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| CDS-3UTR TCA 90 bp | AATGAGGAAGGGAGGACAGGATCATTAAAGACCCTGAAATTGGGCAGGAGTTTGAATTGGGCAGGAGTTTaGACTTGCTGTAGTACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NEEGRTGSLKTLKLGRSLNWAGV*TCCSTP Trigger: TGGAGTACTACAGCAAGTTCAAACTCCTGCCCAATT...CAAACTCCTGCCCAATTTCAGGGTCTTTAATGATCCTGTCCTCCCTTCCTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| CDS-3UTR GCA 90 bp | TTAGTAAATGGTAGACCCAGGGCCCAAGCCCAGATTGTTCCTTGCTCTTTCCTCTTTATTGGTTTGATCTaGAGACACATGAGAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVNGRPRAQAQIVPCSFLFIGLI*RHMRVR Trigger: CCTGACTCTCATGTGTCTGCAGATCAAACCAATAAA...GAGGAAAGAGCAAGGAACAATCTGGGCTTGGGCCCTGGGTCTACCATTTACTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| CDS-3UTR GCA 90 bp | TTAGTAAATGGTAGACCCAGGGCCCAAGCCCAGATTGTTCCTTGCTCTTTCCTCGCTCTTTCCTCACAATaGTACTGGTTAATTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVNGRPRAQAQIVPCSFLALSSQ*YWLIWF Trigger: AAACCAAATTAACCAGTAGCATTGTGAGGAAAGAGC...GAGGAAAGAGCAAGGAACAATCTGGGCTTGGGCCCTGGGTCTACCATTTACTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| CDS-3UTR GCA 90 bp | GAGGACAGGATCATTAAAGACCCTGAAATTGGGCAGGAGTTTGAACTTGCTGTAGCCCAGATTGTTCCTTaGTCTTTCCTCACAATGCTA | + |
|
Preference number: 4 (lower is better) Translates to: EDRIIKDPEIGQEFELAVAQIVP*SFLTML Trigger: TAGCATTGTGAGGAAAGAGCAAGGAACAATCTGGGC...TACAGCAAGTTCAAACTCCTGCCCAATTTCAGGGTCTTTAATGATCCTGTCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| CDS-3UTR GCA 90 bp | TTCCTAAATGTTTATTGGTTTGATCTGCAGACACATGAGAGTCAGGTGCACATAAGGCTGGAGGGGCCATaGTGTTGGCAACAAGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FLNVYWFDLQTHESQVHIRLEGP*CWQQVE Trigger: TTCAACTTGTTGCCAACAGCATGGCCCCTCCAGCCT...TATGTGCACCTGACTCTCATGTGTCTGCAGATCAAACCAATAAACATTTAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| CDS-3UTR GCA 90 bp | GAGGACAGGATCATTAAAGACCCTGAAATTGGGCAGGAGTTTGAACTTGCTGTATTTATTGGTTTGATCTaGAGACACATGAGAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EDRIIKDPEIGQEFELAVFIGLI*RHMRVR Trigger: CCTGACTCTCATGTGTCTGCAGATCAAACCAATAAA...TACAGCAAGTTCAAACTCCTGCCCAATTTCAGGGTCTTTAATGATCCTGTCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| CDS-3UTR TCA 90 bp | GAGGACAGGATCATTAAAGACCCTGAAATTGGGCAGGAGTTTGAACTTGCTGTACTCACAAAAGCTCTGTaGGTTAAGCATGATTTTACT | + |
|
Preference number: 4 (lower is better) Translates to: EDRIIKDPEIGQEFELAVLTKAL*VKHDFT Trigger: AGTAAAATCATGCTTAACTCACAGAGCTTTTGTGAG...TACAGCAAGTTCAAACTCCTGCCCAATTTCAGGGTCTTTAATGATCCTGTCCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| CDS GCA 90 bp | GAAACGGAAGCAGAGTCACTCCCGCCTCGACTTCCGGCCCCTCCGTaGGCAAGCGCAATATGCCTCCTGGCGTTTCCCGATTCTTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ETEAESLPPRLPAPP*ASAICLLAFPDSFS Trigger: GGAAAAAGAATCGGGAAACGCCAGGAGGCATATTGCGCTTGCGCACGGAGGGGCCGGAAGTCGAGGCGGGAGTGACTCTGCTTCCGTTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419016.6 |
||
| CDS-3UTR CAA 90 bp | GACCCAGGGCCCAAGCCCAGATTGTTCCTTGCTCTTTCCTCACAATGCTACTGGAAGAGTCGGTTCATCTaGAGCAGCCGCGAAGAAACC | + |
|
Preference number: 5 (lower is better) Translates to: DPGPKPRLFLALSSQCYWKSRFI*SSREET Trigger: GGTTTCTTCGCGGCTGCTCAAGATGAACCGACTCTT...CCAGTAGCATTGTGAGGAAAGAGCAAGGAACAATCTGGGCTTGGGCCCTGGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| CDS-3UTR CAA 90 bp | ATGGTAGACCCAGGGCCCAAGCCCAGATTGTTCCTTGCTCTTTCCTCACAATGCAAGAGTCGGTTCATCTaGAGCAGCCGCGAAGAAACC | + |
|
Preference number: 5 (lower is better) Translates to: MVDPGPKPRLFLALSSQCKSRFI*SSREET Trigger: GGTTTCTTCGCGGCTGCTCAAGATGAACCGACTCTT...GCATTGTGAGGAAAGAGCAAGGAACAATCTGGGCTTGGGCCCTGGGTCTACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| CDS-3UTR CAA 90 bp | AATGAGGAAGGGAGGACAGGATCATTAAAGACCCTGAAATTGGGCAGGAGTTTGGGGCCCAAGCCCAGATaGTTCCTTGCTCTTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NEEGRTGSLKTLKLGRSLGPKPR*FLALSS Trigger: TGAGGAAAGAGCAAGGAACAATCTGGGCTTGGGCCC...CAAACTCCTGCCCAATTTCAGGGTCTTTAATGATCCTGTCCTCCCTTCCTCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| CDS-3UTR CAA 90 bp | GAGGACAGGATCATTAAAGACCCTGAAATTGGGCAGGAGTTTGAACTTGCTGTAGGAGAGCAAAAGGACTaGGTGCTCTCGGAGAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: EDRIIKDPEIGQEFELAVGEQKD*VLSERA Trigger: GGCTCTCTCCGAGAGCACCAAGTCCTTTTGCTCTCC...TACAGCAAGTTCAAACTCCTGCCCAATTTCAGGGTCTTTAATGATCCTGTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419016.6 |
||
| CDS-3UTR CAA 90 bp | CCAGGGCCCAAGCCCAGATTGTTCCTTGCTCTTTCCTCACAATGCTACTGGTTAATGCTACTGGTTAATTaGGTTTCTGTAGTGGAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: PGPKPRLFLALSSQCYWLMLLVN*VSVVEL Trigger: TAACTCCACTACAGAAACCAAATTAACCAGTAGCAT...TAACCAGTAGCATTGTGAGGAAAGAGCAAGGAACAATCTGGGCTTGGGCCCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| CDS-3UTR CAA 90 bp | AATGAGGAAGGGAGGACAGGATCATTAAAGACCCTGAAATTGGGCAGGAGTTTGTTAAAGACCCTGAAATaGGGCAGGAGTTTGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: NEEGRTGSLKTLKLGRSLLKTLK*GRSLNL Trigger: CAAGTTCAAACTCCTGCCCAATTTCAGGGTCTTTAA...CAAACTCCTGCCCAATTTCAGGGTCTTTAATGATCCTGTCCTCCCTTCCTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| CDS-3UTR CAA 90 bp | GAGGACAGGATCATTAAAGACCCTGAAATTGGGCAGGAGTTTGAACTTGCTGTATATAAGAATAGCCCCTaGCAGTTAACAAGGTACTTA | + |
|
Preference number: 5 (lower is better) Translates to: EDRIIKDPEIGQEFELAVYKNSP*QLTRYL Trigger: TAAGTACCTTGTTAACTGCAAGGGGCTATTCTTATA...TACAGCAAGTTCAAACTCCTGCCCAATTTCAGGGTCTTTAATGATCCTGTCCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| CDS-3UTR CAA 90 bp | TTCCTAAATGTTTATTGGTTTGATCTGCAGACACATGAGAGTCAGGTGCACATATTAAAGACCCTGAAATaGGGCAGGAGTTTGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: FLNVYWFDLQTHESQVHILKTLK*GRSLNL Trigger: CAAGTTCAAACTCCTGCCCAATTTCAGGGTCTTTAA...TATGTGCACCTGACTCTCATGTGTCTGCAGATCAAACCAATAAACATTTAGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| CDS-3UTR CAA 90 bp | CTAAATGTTTATTGGTTTGATCTGCAGACACATGAGAGTCAGGTGCACATAGCAATGCTACTGGTTAATTaGGTTTCTGTAGTGGAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: LNVYWFDLQTHESQVHIAMLLVN*VSVVEL Trigger: TAACTCCACTACAGAAACCAAATTAACCAGTAGCAT...TGCTATGTGCACCTGACTCTCATGTGTCTGCAGATCAAACCAATAAACATTTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| CDS-3UTR CAA 90 bp | GACCATTACCTCAATTATTCCTCACAAAAGCTCTGTGAGTTAAGCATGATTTTATATAAGAATAGCCCCTaGCAGTTAACAAGGTACTTA | + |
|
Preference number: 5 (lower is better) Translates to: DHYLNYSSQKLCELSMILYKNSP*QLTRYL Trigger: TAAGTACCTTGTTAACTGCAAGGGGCTATTCTTATA...TAAAATCATGCTTAACTCACAGAGCTTTTGTGAGGAATAATTGAGGTAATGGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000223500.9 ENST00000419016.6 |
||
| CDS GCA 72 bp | GCAGAGTCACTCCCGCCTCGACTTCCGGCCCCTCCGTaGGCAAGCGCAATATGCCTCCTGGCGTTTCCCGAT | + |
|
Preference number: 6 (lower is better) Translates to: AESLPPRLPAPP*ASAICLLAFPD Trigger: ATCGGGAAACGCCAGGAGGCATATTGCGCTTGCGCACGGAGGGGCCGGAAGTCGAGGCGGGAGTGACTCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419016.6 |
||
| CDS GCA 72 bp | CCTCGACTTCCGGCCCCTCCGTGCGCAAGCGCAATATaGCTCCTGGCGTTTCCCGATTCTTTTTCCGGATTT | + |
|
Preference number: 6 (lower is better) Translates to: PRLPAPPCASAI*LLAFPDSFSGF Trigger: AAATCCGGAAAAAGAATCGGGAAACGCCAGGAGGCATATTGCGCTTGCGCACGGAGGGGCCGGAAGTCGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419016.6 |
||