Pregenerated sensors for CHMP4C (Homo sapiens)
Ensembl gene IDs: ENSG00000164695Ensembl transcript IDs: ENST00000297265.5
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | ACACGTTTTGGGAAATGCATCCATTGCCCCATTCCAAGCTTAATTGGTATAATAGGGATTACAGGTGCCTaGCACCATGTCCGGCTAATT | + |
|
Preference number: 2 (lower is better) Translates to: TRFGKCIHCPIPSLIGIIGITGA*HHVRLI Trigger: AATTAGCCGGACATGGTGGCAGGCACCTGTAATCCC...TATTATACCAATTAAGCTTGGAATGGGGCAATGGATGCATTTCCCAAAACGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| 3UTR-3UTR GCA 90 bp | ACACGTTTTGGGAAATGCATCCATTGCCCCATTCCAAGCTTAATTGGTATAATAATGATCTTGGCTCACTaGAACCTCCATCTCCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: TRFGKCIHCPIPSLIGIIMILAH*NLHLLG Trigger: GCCCAGGAGATGGAGGTTGCAGTGAGCCAAGATCAT...TATTATACCAATTAAGCTTGGAATGGGGCAATGGATGCATTTCCCAAAACGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| 3UTR-3UTR TCA 90 bp | CATCATAATGGCCTGGGAGTGTTCACGCAGTTCCCTAAGTGGCTAAATTACACCACTGCAAAACTCAAGTaGAACTACTTATGTAGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: HHNGLGVFTQFPKWLNYTTAKLK*NYLCRD Trigger: GTCTCTACATAAGTAGTTTCACTTGAGTTTTGCAGT...GGTGTAATTTAGCCACTTAGGGAACTGCGTGAACACTCCCAGGCCATTATGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| 3UTR-3UTR CCA 90 bp | AGAGACTCATATAAGACTCCTCTACTAAAAGGCTCTCCCAAAAGAGACACAGTAATGAGATACCGTGCCTaGCCTCCATCACTGATTCTA | + |
|
Preference number: 2 (lower is better) Translates to: RDSYKTPLLKGSPKRDTVMRYRA*PPSLIL Trigger: TAGAATCAGTGATGGAGGCCAGGCACGGTATCTCAT...TACTGTGTCTCTTTTGGGAGAGCCTTTTAGTAGAGGAGTCTTATATGAGTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| 3UTR CCA 72 bp | CATAATGGCCTGGGAGTGTTCACGCAGTTCCCTAAGTaGCTAAATTACACCCAGGAGATTCTCATTCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: HNGLGVFTQFPK*LNYTQEILIQQ Trigger: TTGCTGAATGAGAATCTCCTGGGTGTAATTTAGCCACTTAGGGAACTGCGTGAACACTCCCAGGCCATTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| 3UTR GCA 72 bp | GTTAGTGCTTTCACACGTTTTGGGAAATGCATCCATTaGCCCATTCCAAGCTTAATTGGTATAATAAATGTC | + |
|
Preference number: 3 (lower is better) Translates to: VSAFTRFGKCIH*PIPSLIGIINV Trigger: GACATTTATTATACCAATTAAGCTTGGAATGGGGCAATGGATGCATTTCCCAAAACGTGTGAAAGCACTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR CCA 90 bp | CATCATAATGGCCTGGGAGTGTTCACGCAGTTCCCTAAGTGGCTAAATTACACCCGGACCAGGGCCTCCTaGGGACTGGGAGCGGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: HHNGLGVFTQFPKWLNYTRTRAS*GLGAAR Trigger: CCGAGCCGCTCCCAGTCCCCAGGAGGCCCTGGTCCG...GGTGTAATTTAGCCACTTAGGGAACTGCGTGAACACTCCCAGGCCATTATGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR GCA 90 bp | CATCATAATGGCCTGGGAGTGTTCACGCAGTTCCCTAAGTGGCTAAATTACACCTGCTCGGGATCGACGTaGAGTGGACGACATGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HHNGLGVFTQFPKWLNYTCSGST*SGRHAW Trigger: CCAGGCATGTCGTCCACTGCACGTCGATCCCGAGCA...GGTGTAATTTAGCCACTTAGGGAACTGCGTGAACACTCCCAGGCCATTATGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR TCA 90 bp | CATCATAATGGCCTGGGAGTGTTCACGCAGTTCCCTAAGTGGCTAAATTACACCGTCGTCCTGGACAGGTaGCACACACTCCAGGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: HHNGLGVFTQFPKWLNYTVVLDR*HTLQGI Trigger: AATGCCCTGGAGTGTGTGTCACCTGTCCAGGACGAC...GGTGTAATTTAGCCACTTAGGGAACTGCGTGAACACTCCCAGGCCATTATGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR CCA 90 bp | CATCATAATGGCCTGGGAGTGTTCACGCAGTTCCCTAAGTGGCTAAATTACACCGGGATCGACGTGCAGTaGACGACATGCCTGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HHNGLGVFTQFPKWLNYTGIDVQ*TTCLVF Trigger: GAAAACCAGGCATGTCGTCCACTGCACGTCGATCCC...GGTGTAATTTAGCCACTTAGGGAACTGCGTGAACACTCCCAGGCCATTATGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR GCA 90 bp | CATCATAATGGCCTGGGAGTGTTCACGCAGTTCCCTAAGTGGCTAAATTACACCATGATCTTGGCTCACTaGAACCTCCATCTCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HHNGLGVFTQFPKWLNYTMILAH*NLHLLG Trigger: GCCCAGGAGATGGAGGTTGCAGTGAGCCAAGATCAT...GGTGTAATTTAGCCACTTAGGGAACTGCGTGAACACTCCCAGGCCATTATGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR TCA 90 bp | CATCATAATGGCCTGGGAGTGTTCACGCAGTTCCCTAAGTGGCTAAATTACACCTGCCATCAATCTGAGTaGGCTGTTTCTCGAACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HHNGLGVFTQFPKWLNYTCHQSE*AVSRTS Trigger: AGAGGTTCGAGAAACAGCTCACTCAGATTGATGGCA...GGTGTAATTTAGCCACTTAGGGAACTGCGTGAACACTCCCAGGCCATTATGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR GCA 90 bp | ACACGTTTTGGGAAATGCATCCATTGCCCCATTCCAAGCTTAATTGGTATAATACTCGCTTATTCTGCGTaGCGTGCTTCTTGGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TRFGKCIHCPIPSLIGIILAYSA*RASWPG Trigger: CCCTGGCCAAGAAGCACGGCACGCAGAATAAGCGAG...TATTATACCAATTAAGCTTGGAATGGGGCAATGGATGCATTTCCCAAAACGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR GCA 90 bp | TTTACATTTACCATGGGTACAGGGATACACGTCATTCGCATAGGAAATAACATTGCCCAACTTGCTCATTaGTGTGGAGTTCGGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FTFTMGTGIHVIRIGNNIAQLAH*CGVRRA Trigger: GGCCCTCCGAACTCCACAGCAATGAGCAAGTTGGGC...AATGTTATTTCCTATGCGAATGACGTGTATCCCTGTACCCATGGTAAATGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR GCA 90 bp | TTTACCATGGGTACAGGGATACACGTCATTCGCATAGGAAATAACATTATTTCTCCTCTGGGAAGATGCTaGTCGGGATCGACGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FTMGTGIHVIRIGNNIISPLGRC*SGSTCS Trigger: ACTGCACGTCGATCCCGAGCAGCATCTTCCCAGAGG...AGAAATAATGTTATTTCCTATGCGAATGACGTGTATCCCTGTACCCATGGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR GCA 90 bp | AGAGACTCATATAAGACTCCTCTACTAAAAGGCTCTCCCAAAAGAGACACAGTAGGGATTACAGGTGCCTaGCACCATGTCCGGCTAATT | + |
|
Preference number: 4 (lower is better) Translates to: RDSYKTPLLKGSPKRDTVGITGA*HHVRLI Trigger: AATTAGCCGGACATGGTGGCAGGCACCTGTAATCCC...TACTGTGTCTCTTTTGGGAGAGCCTTTTAGTAGAGGAGTCTTATATGAGTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR CCA 90 bp | TTTACCATGGGTACAGGGATACACGTCATTCGCATAGGAAATAACATTATTTCTGCGTGCCGTGCTTCTTaGCCAGGGCGATTTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FTMGTGIHVIRIGNNIISACRAS*PGRFLS Trigger: AGAGAGAAATCGCCCTGGCCAAGAAGCACGGCACGC...AGAAATAATGTTATTTCCTATGCGAATGACGTGTATCCCTGTACCCATGGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR CCA 90 bp | AGAGACTCATATAAGACTCCTCTACTAAAAGGCTCTCCCAAAAGAGACACAGTAATCAACAAGTCGTCCTaGACAGGTGACACACACTCC | + |
|
Preference number: 4 (lower is better) Translates to: RDSYKTPLLKGSPKRDTVINKSS*TGDTHS Trigger: GGAGTGTGTGTCACCTGTCCAGGACGACTTGTTGAT...TACTGTGTCTCTTTTGGGAGAGCCTTTTAGTAGAGGAGTCTTATATGAGTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR CCA 90 bp | TTTACCATGGGTACAGGGATACACGTCATTCGCATAGGAAATAACATTATTTCTGAAAGGCGGCCCTCCTaGGAATCAACAAGTCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FTMGTGIHVIRIGNNIISERRPS*ESTSRP Trigger: AGGACGACTTGTTGATTCCCAGGAGGGCCGCCTTTC...AGAAATAATGTTATTTCCTATGCGAATGACGTGTATCCCTGTACCCATGGTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR CCA 90 bp | TTTACCATGGGTACAGGGATACACGTCATTCGCATAGGAAATAACATTATTTCTACTTGCTCATTGCTGTaGAGTTCGGAGGGCCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: FTMGTGIHVIRIGNNIISTCSLL*SSEGQR Trigger: TCGCTGGCCCTCCGAACTCCACAGCAATGAGCAAGT...AGAAATAATGTTATTTCCTATGCGAATGACGTGTATCCCTGTACCCATGGTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR TCA 90 bp | TTTACATTTACCATGGGTACAGGGATACACGTCATTCGCATAGGAAATAACATTCTCAGTGTTGGTGTGTaGGTTCTCCAGGGCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FTFTMGTGIHVIRIGNNILSVGV*VLQGFS Trigger: AGAGAAGCCCTGGAGAACTCACACACCAACACTGAG...AATGTTATTTCCTATGCGAATGACGTGTATCCCTGTACCCATGGTAAATGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR TCA 90 bp | CATCATAATGGCCTGGGAGTGTTCACGCAGTTCCCTAAGTGGCTAAATTACACCAAGCTGCCAATTGTTTaGTATCATCATCCTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HHNGLGVFTQFPKWLNYTKLPIV*YHHPLL Trigger: AAGAAGAGGATGATGATATCAAACAATTGGCAGCTT...GGTGTAATTTAGCCACTTAGGGAACTGCGTGAACACTCCCAGGCCATTATGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR GCA 90 bp | TTTACATTTACCATGGGTACAGGGATACACGTCATTCGCATAGGAAATAACATTTTATTCTGCGTGCCGTaGTTCTTGGCCAGGGCGATT | + |
|
Preference number: 4 (lower is better) Translates to: FTFTMGTGIHVIRIGNNILFCVP*FLARAI Trigger: AATCGCCCTGGCCAAGAAGCACGGCACGCAGAATAA...AATGTTATTTCCTATGCGAATGACGTGTATCCCTGTACCCATGGTAAATGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR CCA 90 bp | AGAGACTCATATAAGACTCCTCTACTAAAAGGCTCTCCCAAAAGAGACACAGTAAGTGGACGACATGCCTaGTTTTCTATTTGGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RDSYKTPLLKGSPKRDTVSGRHA*FSIWLC Trigger: GCACAGCCAAATAGAAAACCAGGCATGTCGTCCACT...TACTGTGTCTCTTTTGGGAGAGCCTTTTAGTAGAGGAGTCTTATATGAGTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR CCA 90 bp | ACACGTTTTGGGAAATGCATCCATTGCCCCATTCCAAGCTTAATTGGTATAATAAGCATCATAATGGCCTaGGAGTGTTCACGCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TRFGKCIHCPIPSLIGIISIIMA*ECSRSS Trigger: GGAACTGCGTGAACACTCCCAGGCCATTATGATGCT...TATTATACCAATTAAGCTTGGAATGGGGCAATGGATGCATTTCCCAAAACGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR TCA 90 bp | ACACGTTTTGGGAAATGCATCCATTGCCCCATTCCAAGCTTAATTGGTATAATAAGTGTGCCATCAATCTaGGTGAGCTGTTTCTCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TRFGKCIHCPIPSLIGIISVPSI*VSCFSN Trigger: GTTCGAGAAACAGCTCACTCAGATTGATGGCACACT...TATTATACCAATTAAGCTTGGAATGGGGCAATGGATGCATTTCCCAAAACGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR CCA 90 bp | TTTACATTTACCATGGGTACAGGGATACACGTCATTCGCATAGGAAATAACATTTCAACACCTCAGTGTTaGTGTGTGAGTTCTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FTFTMGTGIHVIRIGNNISTPQC*CVSSPG Trigger: CCCTGGAGAACTCACACACCAACACTGAGGTGTTGA...AATGTTATTTCCTATGCGAATGACGTGTATCCCTGTACCCATGGTAAATGTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR CCA 90 bp | ACACGTTTTGGGAAATGCATCCATTGCCCCATTCCAAGCTTAATTGGTATAATAGCCTGGTTTTCTATTTaGCTGTGCTGGGAGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TRFGKCIHCPIPSLIGIIAWFSI*LCWERR Trigger: TCTTCTCTCCCAGCACAGCCAAATAGAAAACCAGGC...TATTATACCAATTAAGCTTGGAATGGGGCAATGGATGCATTTCCCAAAACGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR CCA 90 bp | AGAGACTCATATAAGACTCCTCTACTAAAAGGCTCTCCCAAAAGAGACACAGTATGCTTTCACACGTTTTaGGAAATGCATCCATTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RDSYKTPLLKGSPKRDTVCFHTF*EMHPLP Trigger: GGGCAATGGATGCATTTCCCAAAACGTGTGAAAGCA...TACTGTGTCTCTTTTGGGAGAGCCTTTTAGTAGAGGAGTCTTATATGAGTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR GCA 90 bp | TTTACATTTACCATGGGTACAGGGATACACGTCATTCGCATAGGAAATAACATTAGAACTTGCCCAACTTaGTCATTGCTGTGGAGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: FTFTMGTGIHVIRIGNNIRTCPT*SLLWSS Trigger: CGAACTCCACAGCAATGAGCAAGTTGGGCAAGTTCT...AATGTTATTTCCTATGCGAATGACGTGTATCCCTGTACCCATGGTAAATGTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR GCA 90 bp | TTTACCATGGGTACAGGGATACACGTCATTCGCATAGGAAATAACATTATTTCTTGGGCGATATCCTGTTaGTCTGTGATCTCTTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: FTMGTGIHVIRIGNNIISWAISC*SVISCI Trigger: GATGCAAGAGATCACAGAGCAACAGGATATCGCCCA...AGAAATAATGTTATTTCCTATGCGAATGACGTGTATCCCTGTACCCATGGTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR GCA 90 bp | ACACGTTTTGGGAAATGCATCCATTGCCCCATTCCAAGCTTAATTGGTATAATAACACGTTTTGGGAAATaGATCCATTGCCCCATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TRFGKCIHCPIPSLIGIITRFGK*IHCPIP Trigger: TGGAATGGGGCAATGGATGCATTTCCCAAAACGTGT...TATTATACCAATTAAGCTTGGAATGGGGCAATGGATGCATTTCCCAAAACGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR CCA 90 bp | ACACGTTTTGGGAAATGCATCCATTGCCCCATTCCAAGCTTAATTGGTATAATAAGGGCGATTTCTCTCTaGATTCGATTTTCCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TRFGKCIHCPIPSLIGIIRAISL*IRFSRY Trigger: GTACCTGGAAAATCGAATCCAGAGAGAAATCGCCCT...TATTATACCAATTAAGCTTGGAATGGGGCAATGGATGCATTTCCCAAAACGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR CCA 90 bp | TTTACATTTACCATGGGTACAGGGATACACGTCATTCGCATAGGAAATAACATTATGAGATACCGTGCCTaGCCTCCATCACTGATTCTA | + |
|
Preference number: 4 (lower is better) Translates to: FTFTMGTGIHVIRIGNNIMRYRA*PPSLIL Trigger: TAGAATCAGTGATGGAGGCCAGGCACGGTATCTCAT...AATGTTATTTCCTATGCGAATGACGTGTATCCCTGTACCCATGGTAAATGTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR CCA 90 bp | TTTACATTTACCATGGGTACAGGGATACACGTCATTCGCATAGGAAATAACATTACGCAGTTCCCTAAGTaGCTAAATTACACCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FTFTMGTGIHVIRIGNNITQFPK*LNYTQE Trigger: CTCCTGGGTGTAATTTAGCCACTTAGGGAACTGCGT...AATGTTATTTCCTATGCGAATGACGTGTATCCCTGTACCCATGGTAAATGTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR TCA 90 bp | TTTACATTTACCATGGGTACAGGGATACACGTCATTCGCATAGGAAATAACATTCCAAAGCCAACCCGTTaGGAAAATGCTTCTGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: FTFTMGTGIHVIRIGNNIPKPTR*ENASEI Trigger: AATCTCAGAAGCATTTTCTCAACGGGTTGGCTTTGG...AATGTTATTTCCTATGCGAATGACGTGTATCCCTGTACCCATGGTAAATGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR CCA 90 bp | TTTACCATGGGTACAGGGATACACGTCATTCGCATAGGAAATAACATTATTTCTGCTTCTGAGATTTCTTaGGCGATATCCTGTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FTMGTGIHVIRIGNNIISASEIS*AISCCS Trigger: AGAGCAACAGGATATCGCCCAAGAAATCTCAGAAGC...AGAAATAATGTTATTTCCTATGCGAATGACGTGTATCCCTGTACCCATGGTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR TCA 90 bp | ACACGTTTTGGGAAATGCATCCATTGCCCCATTCCAAGCTTAATTGGTATAATATATCCTGTTGCTCTGTaGTCTCTTGCATCAAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: TRFGKCIHCPIPSLIGIIYPVAL*SLASNH Trigger: ATGATTTGATGCAAGAGATCACAGAGCAACAGGATA...TATTATACCAATTAAGCTTGGAATGGGGCAATGGATGCATTTCCCAAAACGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR TCA 90 bp | ACACGTTTTGGGAAATGCATCCATTGCCCCATTCCAAGCTTAATTGGTATAATATTGAGAAAATGCTTCTaGGATTTCTTGGGCGATATC | + |
|
Preference number: 4 (lower is better) Translates to: TRFGKCIHCPIPSLIGIILRKCF*DFLGDI Trigger: GATATCGCCCAAGAAATCTCAGAAGCATTTTCTCAA...TATTATACCAATTAAGCTTGGAATGGGGCAATGGATGCATTTCCCAAAACGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR GCA 90 bp | TTTACATTTACCATGGGTACAGGGATACACGTCATTCGCATAGGAAATAACATTTTTCATCGCTTTTGCTaGAAAGCCCATGTTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FTFTMGTGIHVIRIGNNIFHRFC*KAHVPQ Trigger: TTGAGGAACATGGGCTTTGCAGCAAAAGCGATGAAA...AATGTTATTTCCTATGCGAATGACGTGTATCCCTGTACCCATGGTAAATGTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR TCA 90 bp | ACACGTTTTGGGAAATGCATCCATTGCCCCATTCCAAGCTTAATTGGTATAATAACTGCAAAACTCAAGTaGAACTACTTATGTAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TRFGKCIHCPIPSLIGIITAKLK*NYLCRD Trigger: GTCTCTACATAAGTAGTTTCACTTGAGTTTTGCAGT...TATTATACCAATTAAGCTTGGAATGGGGCAATGGATGCATTTCCCAAAACGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR TCA 90 bp | ACACGTTTTGGGAAATGCATCCATTGCCCCATTCCAAGCTTAATTGGTATAATACATGCATTTATACACTaGAGCTGTAACAGCATCATA | + |
|
Preference number: 4 (lower is better) Translates to: TRFGKCIHCPIPSLIGIIHAFIH*SCNSII Trigger: TATGATGCTGTTACAGCTTCAGTGTATAAATGCATG...TATTATACCAATTAAGCTTGGAATGGGGCAATGGATGCATTTCCCAAAACGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR GCA 90 bp | TTTACATTTACCATGGGTACAGGGATACACGTCATTCGCATAGGAAATAACATTCAATTCTTCAAGTTCTaGCATCAACTCATCCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: FTFTMGTGIHVIRIGNNIQFFKF*HQLILI Trigger: GATGAGGATGAGTTGATGGCAGAACTTGAAGAATTG...AATGTTATTTCCTATGCGAATGACGTGTATCCCTGTACCCATGGTAAATGTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR GCA 90 bp | TTTACCATGGGTACAGGGATACACGTCATTCGCATAGGAAATAACATTATTTCTTTAGGTAGCCCAAGCTaGCAATTGTTTGATATCATC | + |
|
Preference number: 4 (lower is better) Translates to: FTMGTGIHVIRIGNNIISLGSPS*QLFDII Trigger: GATGATATCAAACAATTGGCAGCTTGGGCTACCTAA...AGAAATAATGTTATTTCCTATGCGAATGACGTGTATCCCTGTACCCATGGTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR GCA 90 bp | AGAGACTCATATAAGACTCCTCTACTAAAAGGCTCTCCCAAAAGAGACACAGTACAGAAAGAATACTCATaGATTTATACACTGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RDSYKTPLLKGSPKRDTVQKEYS*IYTLKL Trigger: CAGCTTCAGTGTATAAATGCATGAGTATTCTTTCTG...TACTGTGTCTCTTTTGGGAGAGCCTTTTAGTAGAGGAGTCTTATATGAGTCTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR CCA 90 bp | ACACGTTTTGGGAAATGCATCCATTGCCCCATTCCAAGCTTAATTGGTATAATATATTTACATTTACCATaGGTACAGGGATACACGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TRFGKCIHCPIPSLIGIIYLHLP*VQGYTS Trigger: TGACGTGTATCCCTGTACCCATGGTAAATGTAAATA...TATTATACCAATTAAGCTTGGAATGGGGCAATGGATGCATTTCCCAAAACGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR GCA 90 bp | TTTACCATGGGTACAGGGATACACGTCATTCGCATAGGAAATAACATTATTTCTTGCTCTGTGATCTCTTaGATCAAATCATCTATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FTMGTGIHVIRIGNNIISCSVIS*IKSSIL Trigger: CAAAATAGATGATTTGATGCAAGAGATCACAGAGCA...AGAAATAATGTTATTTCCTATGCGAATGACGTGTATCCCTGTACCCATGGTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS CCA 90 bp | TTGCCCAGCATCTCCTCAGTCTCCCGAAGTCGGACCAGGGCCTCCTaGGGACTGGGAGCGGCTCGGCTCTTAGAAGAGCCGCCCCCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LPSISSVSRSRTRAS*GLGAARLLEEPPPL Trigger: TAAAGGGGGCGGCTCTTCTAAGAGCCGAGCCGCTCCCAGTCCCCAGGAGGCCCTGGTCCGACTTCGGGAGACTGAGGAGATGCTGGGCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS CCA 90 bp | GCAAGGCAGTCCTCTCGGGGACCCAGACCGGAAAGGCGGCCCTCCTaGGAATCAACAAGTCGTCCTGGACAGGTGACACACACTCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ARQSSRGPRPERRPS*ESTSRPGQVTHTPG Trigger: CCCTGGAGTGTGTGTCACCTGTCCAGGACGACTTGTTGATTCCCAGGAGGGCCGCCTTTCCGGTCTGGGTCCCCGAGAGGACTGCCTTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS GCA 90 bp | CTTAGAAGAGCCGCCCCCTTTAAAGAACTTGCCCAACTTGCTCATTaGTGTGGAGTTCGGAGGGCCAGCGATCCCGGGGGCCTCTCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LRRAAPFKELAQLAH*CGVRRASDPGGLSG Trigger: TCCCGAGAGGCCCCCGGGATCGCTGGCCCTCCGAACTCCACAGCAATGAGCAAGTTGGGCAAGTTCTTTAAAGGGGGCGGCTCTTCTAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS GCA 90 bp | GGGCGATTTCTCTCTGGATTCGATTTTCCAGGTACTCTTGTTTCTTaGCCAGCATCTCCTCAGTCTCCCGAAGTCGGACCAGGGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GRFLSGFDFPGTLVS*PASPQSPEVGPGPP Trigger: AGGAGGCCCTGGTCCGACTTCGGGAGACTGAGGAGATGCTGGGCAAGAAACAAGAGTACCTGGAAAATCGAATCCAGAGAGAAATCGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS GCA 90 bp | GGATCGACGTGCAGTGGACGACATGCCTGGTTTTCTATTTGGCTGTaGTGGGAGAGAAGAGGAAGGCACATTTGGAAGGCGGATATTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GSTCSGRHAWFSIWL*WERRGRHIWKADIC Trigger: ACAAATATCCGCCTTCCAAATGTGCCTTCCTCTTCTCTCCCAGCACAGCCAAATAGAAAACCAGGCATGTCGTCCACTGCACGTCGATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS CCA 90 bp | TTAGTGCCTGTAATGCAGCTCGCTTATTCTGCGTGCCGTGCTTCTTaGCCAGGGCGATTTCTCTCTGGATTCGATTTTCCAGGTACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LVPVMQLAYSACRAS*PGRFLSGFDFPGTL Trigger: AAGAGTACCTGGAAAATCGAATCCAGAGAGAAATCGCCCTGGCCAAGAAGCACGGCACGCAGAATAAGCGAGCTGCATTACAGGCACTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR CAA 90 bp | CATCATAATGGCCTGGGAGTGTTCACGCAGTTCCCTAAGTGGCTAAATTACACCTGCCTGGTTTTCTATTaGGCTGTGCTGGGAGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HHNGLGVFTQFPKWLNYTCLVFY*AVLGEK Trigger: CTTCTCTCCCAGCACAGCCAAATAGAAAACCAGGCA...GGTGTAATTTAGCCACTTAGGGAACTGCGTGAACACTCCCAGGCCATTATGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR CAA 90 bp | TTTACATTTACCATGGGTACAGGGATACACGTCATTCGCATAGGAAATAACATTTGCGTGCCGTGCTTCTaGGCCAGGGCGATTTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FTFTMGTGIHVIRIGNNICVPCF*ARAISL Trigger: GAGAGAAATCGCCCTGGCCAAGAAGCACGGCACGCA...AATGTTATTTCCTATGCGAATGACGTGTATCCCTGTACCCATGGTAAATGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS TCA 90 bp | AGGGCTTCTCTCTGGAACTCAATGGTAGAAAGTGTGCCATCAATCTaGGTGAGCTGTTTCTCGAACCTCTTCTTTCTCTTTAGTGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RASLWNSMVESVPSI*VSCFSNLFFLFSAC Trigger: ACAGGCACTAAAGAGAAAGAAGAGGTTCGAGAAACAGCTCACTCAGATTGATGGCACACTTTCTACCATTGAGTTCCAGAGAGAAGCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS TCA 90 bp | GCCATCAACTCATCCTCATCAAAGTCATCACCAAAGCCAACCCGTTaGGAAAATGCTTCTGAGATTTCTTGGGCGATATCCTGTTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AINSSSSKSSPKPTR*ENASEISWAISCCS Trigger: AGAGCAACAGGATATCGCCCAAGAAATCTCAGAAGCATTTTCTCAACGGGTTGGCTTTGGTGATGACTTTGATGAGGATGAGTTGATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR CAA 90 bp | TTTACCATGGGTACAGGGATACACGTCATTCGCATAGGAAATAACATTATTTCTTGCCCAACTTGCTCATaGCTGTGGAGTTCGGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: FTMGTGIHVIRIGNNIISCPTCS*LWSSEG Trigger: GCCCTCCGAACTCCACAGCAATGAGCAAGTTGGGCA...AGAAATAATGTTATTTCCTATGCGAATGACGTGTATCCCTGTACCCATGGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS TCA 90 bp | CTCATCAAAGTCATCACCAAAGCCAACCCGTTGAGAAAATGCTTCTaGGATTTCTTGGGCGATATCCTGTTGCTCTGTGATCTCTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LIKVITKANPLRKCF*DFLGDILLLCDLLH Trigger: ATGCAAGAGATCACAGAGCAACAGGATATCGCCCAAGAAATCTCAGAAGCATTTTCTCAACGGGTTGGCTTTGGTGATGACTTTGATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR CAA 90 bp | TTTACATTTACCATGGGTACAGGGATACACGTCATTCGCATAGGAAATAACATTCTCAACACCTCAGTGTaGGTGTGTGAGTTCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FTFTMGTGIHVIRIGNNILNTSV*VCEFSR Trigger: CCTGGAGAACTCACACACCAACACTGAGGTGTTGAG...AATGTTATTTCCTATGCGAATGACGTGTATCCCTGTACCCATGGTAAATGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR CAA 90 bp | ACACGTTTTGGGAAATGCATCCATTGCCCCATTCCAAGCTTAATTGGTATAATAAAGAACTTGCCCAACTaGCTCATTGCTGTGGAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TRFGKCIHCPIPSLIGIIKNLPN*LIAVEF Trigger: GAACTCCACAGCAATGAGCAAGTTGGGCAAGTTCTT...TATTATACCAATTAAGCTTGGAATGGGGCAATGGATGCATTTCCCAAAACGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR CAA 90 bp | ACACGTTTTGGGAAATGCATCCATTGCCCCATTCCAAGCTTAATTGGTATAATATTGGGCGATATCCTGTaGCTCTGTGATCTCTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: TRFGKCIHCPIPSLIGIILGDIL*LCDLLH Trigger: ATGCAAGAGATCACAGAGCAACAGGATATCGCCCAA...TATTATACCAATTAAGCTTGGAATGGGGCAATGGATGCATTTCCCAAAACGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR CAA 90 bp | TTTACCATGGGTACAGGGATACACGTCATTCGCATAGGAAATAACATTATTTCTCCCCCTTTAAAGAACTaGCCCAACTTGCTCATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FTMGTGIHVIRIGNNIISPPLKN*PNLLIA Trigger: AGCAATGAGCAAGTTGGGCAAGTTCTTTAAAGGGGG...AGAAATAATGTTATTTCCTATGCGAATGACGTGTATCCCTGTACCCATGGTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR CAA 90 bp | ACACGTTTTGGGAAATGCATCCATTGCCCCATTCCAAGCTTAATTGGTATAATAATTTTCCAGGTACTCTaGTTTCTTGCCCAGCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: TRFGKCIHCPIPSLIGIIIFQVL*FLAQHL Trigger: GAGATGCTGGGCAAGAAACAAGAGTACCTGGAAAAT...TATTATACCAATTAAGCTTGGAATGGGGCAATGGATGCATTTCCCAAAACGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR CAA 90 bp | TTTACCATGGGTACAGGGATACACGTCATTCGCATAGGAAATAACATTATTTCTCAGATTTCATCGCTTTaGCTGCAAAGCCCATGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FTMGTGIHVIRIGNNIISQISSL*LQSPCS Trigger: GGAACATGGGCTTTGCAGCAAAAGCGATGAAATCTG...AGAAATAATGTTATTTCCTATGCGAATGACGTGTATCCCTGTACCCATGGTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR CAA 90 bp | TTTACCATGGGTACAGGGATACACGTCATTCGCATAGGAAATAACATTATTTCTGTGCTTTCACACGTTTaGGGAAATGCATCCATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: FTMGTGIHVIRIGNNIISVLSHV*GNASIA Trigger: GGCAATGGATGCATTTCCCAAAACGTGTGAAAGCAC...AGAAATAATGTTATTTCCTATGCGAATGACGTGTATCCCTGTACCCATGGTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR CAA 90 bp | TTTACCATGGGTACAGGGATACACGTCATTCGCATAGGAAATAACATTATTTCTAAGAGGAAGGCACATTaGGAAGGCGGATATTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FTMGTGIHVIRIGNNIISKRKAH*EGGYLS Trigger: TGACAAATATCCGCCTTCCAAATGTGCCTTCCTCTT...AGAAATAATGTTATTTCCTATGCGAATGACGTGTATCCCTGTACCCATGGTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS-3UTR CAA 90 bp | TTTACCATGGGTACAGGGATACACGTCATTCGCATAGGAAATAACATTATTTCTTGGGAAATGCATCCATaGCCCCATTCCAAGCTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: FTMGTGIHVIRIGNNIISWEMHP*PHSKLN Trigger: ATTAAGCTTGGAATGGGGCAATGGATGCATTTCCCA...AGAAATAATGTTATTTCCTATGCGAATGACGTGTATCCCTGTACCCATGGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS CCA 72 bp | ATCTCCTCAGTCTCCCGAAGTCGGACCAGGGCCTCCTaGGGACTGGGAGCGGCTCGGCTCTTAGAAGAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: ISSVSRSRTRAS*GLGAARLLEEP Trigger: CGGCTCTTCTAAGAGCCGAGCCGCTCCCAGTCCCCAGGAGGCCCTGGTCCGACTTCGGGAGACTGAGGAGAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS GCA 72 bp | GCCGCCCCCTTTAAAGAACTTGCCCAACTTGCTCATTaGTGTGGAGTTCGGAGGGCCAGCGATCCCGGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AAPFKELAQLAH*CGVRRASDPGG Trigger: GCCCCCGGGATCGCTGGCCCTCCGAACTCCACAGCAATGAGCAAGTTGGGCAAGTTCTTTAAAGGGGGCGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS CCA 72 bp | TCCTCTCGGGGACCCAGACCGGAAAGGCGGCCCTCCTaGGAATCAACAAGTCGTCCTGGACAGGTGACACAC | + |
|
Preference number: 6 (lower is better) Translates to: SSRGPRPERRPS*ESTSRPGQVTH Trigger: GTGTGTCACCTGTCCAGGACGACTTGTTGATTCCCAGGAGGGCCGCCTTTCCGGTCTGGGTCCCCGAGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS CAA 90 bp | GCTCGGCTCTTAGAAGAGCCGCCCCCTTTAAAGAACTTGCCCAACTaGCTCATTGCTGTGGAGTTCGGAGGGCCAGCGATCCCGGGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ARLLEEPPPLKNLPN*LIAVEFGGPAIPGA Trigger: GGCCCCCGGGATCGCTGGCCCTCCGAACTCCACAGCAATGAGCAAGTTGGGCAAGTTCTTTAAAGGGGGCGGCTCTTCTAAGAGCCGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS CCA 72 bp | GGAAAGGCGGCCCTCCTGGGAATCAACAAGTCGTCCTaGACAGGTGACACACACTCCAGGGCATTTCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GKAALLGINKSS*TGDTHSRAFPG Trigger: GCCAGGAAATGCCCTGGAGTGTGTGTCACCTGTCCAGGACGACTTGTTGATTCCCAGGAGGGCCGCCTTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS CAA 90 bp | CTGGGAGCGGCTCGGCTCTTAGAAGAGCCGCCCCCTTTAAAGAACTaGCCCAACTTGCTCATTGCTGTGGAGTTCGGAGGGCCAGCGATC | + |
|
Preference number: 6 (lower is better) Translates to: LGAARLLEEPPPLKN*PNLLIAVEFGGPAI Trigger: GATCGCTGGCCCTCCGAACTCCACAGCAATGAGCAAGTTGGGCAAGTTCTTTAAAGGGGGCGGCTCTTCTAAGAGCCGAGCCGCTCCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS CCA 72 bp | CCCTCTGGGAAGATGCTGCTCGGGATCGACGTGCAGTaGACGACATGCCTGGTTTTCTATTTGGCTGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PSGKMLLGIDVQ*TTCLVFYLAVL Trigger: CAGCACAGCCAAATAGAAAACCAGGCATGTCGTCCACTGCACGTCGATCCCGAGCAGCATCTTCCCAGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS CCA 72 bp | TGCTGCTCGGGATCGACGTGCAGTGGACGACATGCCTaGTTTTCTATTTGGCTGTGCTGGGAGAGAAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: CCSGSTCSGRHA*FSIWLCWERRG Trigger: TCCTCTTCTCTCCCAGCACAGCCAAATAGAAAACCAGGCATGTCGTCCACTGCACGTCGATCCCGAGCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS CAA 72 bp | GCTCGGCTCTTAGAAGAGCCGCCCCCTTTAAAGAACTaGCCCAACTTGCTCATTGCTGTGGAGTTCGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: ARLLEEPPPLKN*PNLLIAVEFGG Trigger: CCCTCCGAACTCCACAGCAATGAGCAAGTTGGGCAAGTTCTTTAAAGGGGGCGGCTCTTCTAAGAGCCGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS CAA 90 bp | AGGGCGATTTCTCTCTGGATTCGATTTTCCAGGTACTCTTGTTTCTaGCCCAGCATCTCCTCAGTCTCCCGAAGTCGGACCAGGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RAISLWIRFSRYSCF*PSISSVSRSRTRAS Trigger: GGAGGCCCTGGTCCGACTTCGGGAGACTGAGGAGATGCTGGGCAAGAAACAAGAGTACCTGGAAAATCGAATCCAGAGAGAAATCGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS GCA 72 bp | AGTGCCTGTAATGCAGCTCGCTTATTCTGCGTGCCGTaGTTCTTGGCCAGGGCGATTTCTCTCTGGATTCGA | + |
|
Preference number: 6 (lower is better) Translates to: SACNAARLFCVP*FLARAISLWIR Trigger: TCGAATCCAGAGAGAAATCGCCCTGGCCAAGAAGCACGGCACGCAGAATAAGCGAGCTGCATTACAGGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS GCA 72 bp | AAGATGCTGCTCGGGATCGACGTGCAGTGGACGACATaGCTGGTTTTCTATTTGGCTGTGCTGGGAGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: KMLLGIDVQWTT*LVFYLAVLGEK Trigger: CTTCTCTCCCAGCACAGCCAAATAGAAAACCAGGCATGTCGTCCACTGCACGTCGATCCCGAGCAGCATCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS CAA 72 bp | TTAGAAGAGCCGCCCCCTTTAAAGAACTTGCCCAACTaGCTCATTGCTGTGGAGTTCGGAGGGCCAGCGATC | + |
|
Preference number: 6 (lower is better) Translates to: LEEPPPLKNLPN*LIAVEFGGPAI Trigger: GATCGCTGGCCCTCCGAACTCCACAGCAATGAGCAAGTTGGGCAAGTTCTTTAAAGGGGGCGGCTCTTCTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS CAA 90 bp | CTTGGCCAGGGCGATTTCTCTCTGGATTCGATTTTCCAGGTACTCTaGTTTCTTGCCCAGCATCTCCTCAGTCTCCCGAAGTCGGACCAG | + |
|
Preference number: 6 (lower is better) Translates to: LGQGDFSLDSIFQVL*FLAQHLLSLPKSDQ Trigger: CTGGTCCGACTTCGGGAGACTGAGGAGATGCTGGGCAAGAAACAAGAGTACCTGGAAAATCGAATCCAGAGAGAAATCGCCCTGGCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS GCA 72 bp | TCTTTAGTGCCTGTAATGCAGCTCGCTTATTCTGCGTaGCGTGCTTCTTGGCCAGGGCGATTTCTCTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SLVPVMQLAYSA*RASWPGRFLSG Trigger: TCCAGAGAGAAATCGCCCTGGCCAAGAAGCACGGCACGCAGAATAAGCGAGCTGCATTACAGGCACTAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS GCA 72 bp | TGCAGTGGACGACATGCCTGGTTTTCTATTTGGCTGTaGTGGGAGAGAAGAGGAAGGCACATTTGGAAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: CSGRHAWFSIWL*WERRGRHIWKA Trigger: CGCCTTCCAAATGTGCCTTCCTCTTCTCTCCCAGCACAGCCAAATAGAAAACCAGGCATGTCGTCCACTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS CCA 72 bp | GTAATGCAGCTCGCTTATTCTGCGTGCCGTGCTTCTTaGCCAGGGCGATTTCTCTCTGGATTCGATTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VMQLAYSACRAS*PGRFLSGFDFP Trigger: TGGAAAATCGAATCCAGAGAGAAATCGCCCTGGCCAAGAAGCACGGCACGCAGAATAAGCGAGCTGCATTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS CAA 72 bp | TGTAATGCAGCTCGCTTATTCTGCGTGCCGTGCTTCTaGGCCAGGGCGATTTCTCTCTGGATTCGATTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: CNAARLFCVPCF*ARAISLWIRFS Trigger: GGAAAATCGAATCCAGAGAGAAATCGCCCTGGCCAAGAAGCACGGCACGCAGAATAAGCGAGCTGCATTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS CAA 90 bp | TTTAGTGCCTGTAATGCAGCTCGCTTATTCTGCGTGCCGTGCTTCTaGGCCAGGGCGATTTCTCTCTGGATTCGATTTTCCAGGTACTCT | + |
|
Preference number: 6 (lower is better) Translates to: FSACNAARLFCVPCF*ARAISLWIRFSRYS Trigger: AGAGTACCTGGAAAATCGAATCCAGAGAGAAATCGCCCTGGCCAAGAAGCACGGCACGCAGAATAAGCGAGCTGCATTACAGGCACTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS TCA 72 bp | GTCATCACCAAAGCCAACCCGTTGAGAAAATGCTTCTaGGATTTCTTGGGCGATATCCTGTTGCTCTGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: VITKANPLRKCF*DFLGDILLLCD Trigger: ATCACAGAGCAACAGGATATCGCCCAAGAAATCTCAGAAGCATTTTCTCAACGGGTTGGCTTTGGTGATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS TCA 72 bp | CTCTGGAACTCAATGGTAGAAAGTGTGCCATCAATCTaGGTGAGCTGTTTCTCGAACCTCTTCTTTCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LWNSMVESVPSI*VSCFSNLFFLF Trigger: AAAGAGAAAGAAGAGGTTCGAGAAACAGCTCACTCAGATTGATGGCACACTTTCTACCATTGAGTTCCAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS CAA 72 bp | AAAATGTGTTTTAGTTTAGGTAGCCCAAGCTGCCAATaGTTTGATATCATCATCCTCTTCTTCTGCCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: KMCFSLGSPSCQ*FDIIILFFCPL Trigger: CAGAGGGCAGAAGAAGAGGATGATGATATCAAACAATTGGCAGCTTGGGCTACCTAAACTAAAACACATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||
| CDS GCA 72 bp | ATTTCTTGGGCGATATCCTGTTGCTCTGTGATCTCTTaGATCAAATCATCTATTTTGTTCAGATCCATGTTT | + |
|
Preference number: 6 (lower is better) Translates to: ISWAISCCSVIS*IKSSILFRSMF Trigger: AAACATGGATCTGAACAAAATAGATGATTTGATGCAAGAGATCACAGAGCAACAGGATATCGCCCAAGAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297265.5 |
||