Pregenerated sensors for CHMP4B (Homo sapiens)
Ensembl gene IDs: ENSG00000101421Ensembl transcript IDs: ENST00000217402.3
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGCACCACATCCTGCCTGCCCCACACACGCACACGCCTGCTCGCTaGGCAGGCCACCACAGTCTGTCTGGGCCCAGCCAGCGCTGGACC | + |
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Preference number: 1 (lower is better) Translates to: LHHILPAPHTHTPAR*AGHHSLSGPSQRWT Trigger: GGTCCAGCGCTGGCTGGGCCCAGACAGACTGTGGTGGCCTGCGCAGCGAGCAGGCGTGTGCGTGTGTGGGGCAGGCAGGATGTGGTGCAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| 3UTR TCA 90 bp | TGCCAGTACCGTACAAGTACACAAAGAGATGTGCGGCAAGTCAACTaGCTTACAAGGACAGAGGCTACATTTCAGGTCATTTCAACTGCA | + |
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Preference number: 1 (lower is better) Translates to: CQYRTSTQRDVRQVN*LTRTEATFQVISTA Trigger: TGCAGTTGAAATGACCTGAAATGTAGCCTCTGTCCTTGTAAGTCAGTTGACTTGCCGCACATCTCTTTGTGTACTTGTACGGTACTGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| 3UTR GCA 90 bp | AAAAATGACTTTTCTGCCAGTACCGTACAAGTACACAAAGAGATGTaGGGCAAGTCAACTGACTTACAAGGACAGAGGCTACATTTCAGG | + |
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Preference number: 1 (lower is better) Translates to: KNDFSASTVQVHKEM*GKSTDLQGQRLHFR Trigger: CCTGAAATGTAGCCTCTGTCCTTGTAAGTCAGTTGACTTGCCGCACATCTCTTTGTGTACTTGTACGGTACTGGCAGAAAAGTCATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| 3UTR-3UTR CCA 90 bp | GGAGTGGGCCAGAGTGGTAAACACAGGGCCAATACACAGGTGATGGACAGAAACCCACCACAGTCTGTCTaGGCCCAGCCAGCGCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: GVGQSGKHRANTQVMDRNPPQSV*AQPALD Trigger: GTCCAGCGCTGGCTGGGCCCAGACAGACTGTGGTGG...GTTTCTGTCCATCACCTGTGTATTGGCCCTGTGTTTACCACTCTGGCCCACTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| 3UTR-3UTR GCA 90 bp | TGCGGCAAGTCAACTGACTTACAAGGACAGAGGCTACATTTCAGGTCATTTCAACACACGCCTGCTCGCTaGGCAGGCCACCACAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: CGKSTDLQGQRLHFRSFQHTPAR*AGHHSL Trigger: CAGACTGTGGTGGCCTGCGCAGCGAGCAGGCGTGTG...TTGAAATGACCTGAAATGTAGCCTCTGTCCTTGTAAGTCAGTTGACTTGCCGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| 3UTR-3UTR GCA 90 bp | TCAACTGACTTACAAGGACAGAGGCTACATTTCAGGTCATTTCAACTGCAACCAACACACGCACACGCCTaGTCGCTGCGCAGGCCACCA | + |
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Preference number: 2 (lower is better) Translates to: STDLQGQRLHFRSFQLQPTHAHA*SLRRPP Trigger: TGGTGGCCTGCGCAGCGAGCAGGCGTGTGCGTGTGT...TGGTTGCAGTTGAAATGACCTGAAATGTAGCCTCTGTCCTTGTAAGTCAGTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| 3UTR-3UTR GCA 90 bp | TTGAAAAATGACTTTTCTGCCAGTACCGTACAAGTACACAAAGAGATGTGCGGCGCACCACATCCTGCCTaGCCCACACACGCACACGCC | + |
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Preference number: 2 (lower is better) Translates to: LKNDFSASTVQVHKEMCGAPHPA*PTHAHA Trigger: GGCGTGTGCGTGTGTGGGGCAGGCAGGATGTGGTGC...GCCGCACATCTCTTTGTGTACTTGTACGGTACTGGCAGAAAAGTCATTTTTCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| 3UTR-3UTR GCA 90 bp | GGACAGAGGCTACATTTCAGGTCATTTCAACTGCAACCAGTCGACCCTTTCCATCGCCCATCTCCCAGGTaGAGACCATGCTATGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: GQRLHFRSFQLQPVDPFHRPSPR*RPCYAE Trigger: CTCTGCATAGCATGGTCTGCACCTGGGAGATGGGCG...ATGGAAAGGGTCGACTGGTTGCAGTTGAAATGACCTGAAATGTAGCCTCTGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| 3UTR-3UTR GCA 90 bp | TCAACTGACTTACAAGGACAGAGGCTACATTTCAGGTCATTTCAACTGCAACCAGCCTGCACCACATCCTaGCTGCCCCACACACGCACA | + |
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Preference number: 2 (lower is better) Translates to: STDLQGQRLHFRSFQLQPACTTS*LPHTRT Trigger: TGTGCGTGTGTGGGGCAGGCAGGATGTGGTGCAGGC...TGGTTGCAGTTGAAATGACCTGAAATGTAGCCTCTGTCCTTGTAAGTCAGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| 3UTR GCA 72 bp | TTTTCTGCCAGTACCGTACAAGTACACAAAGAGATGTaGGGCAAGTCAACTGACTTACAAGGACAGAGGCTA | + |
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Preference number: 3 (lower is better) Translates to: FSASTVQVHKEM*GKSTDLQGQRL Trigger: TAGCCTCTGTCCTTGTAAGTCAGTTGACTTGCCGCACATCTCTTTGTGTACTTGTACGGTACTGGCAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| 3UTR TCA 72 bp | CGTACAAGTACACAAAGAGATGTGCGGCAAGTCAACTaGCTTACAAGGACAGAGGCTACATTTCAGGTCATT | + |
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Preference number: 3 (lower is better) Translates to: RTSTQRDVRQVN*LTRTEATFQVI Trigger: AATGACCTGAAATGTAGCCTCTGTCCTTGTAAGTCAGTTGACTTGCCGCACATCTCTTTGTGTACTTGTACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| CDS-3UTR GCA 90 bp | GGACAGAGGCTACATTTCAGGTCATTTCAACTGCAACCAGTCGACCCTTTCCATGAACACCGACATGGTTaGTGCTCGCCGCGCCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: GQRLHFRSFQLQPVDPFHEHRHG*CSPRRP Trigger: AGGCCGGCGCGGCGAGCAGCAACCATGTCGGTGTTC...ATGGAAAGGGTCGACTGGTTGCAGTTGAAATGACCTGAAATGTAGCCTCTGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| CDS-3UTR GCA 90 bp | GAGATGTGCGGCAAGTCAACTGACTTACAAGGACAGAGGCTACATTTCAGGTCACACACGCCTGCTCGCTaGGCAGGCCACCACAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: EMCGKSTDLQGQRLHFRSHTPAR*AGHHSL Trigger: CAGACTGTGGTGGCCTGCGCAGCGAGCAGGCGTGTG...TGACCTGAAATGTAGCCTCTGTCCTTGTAAGTCAGTTGACTTGCCGCACATCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| CDS-3UTR GCA 90 bp | GAGATGTGCGGCAAGTCAACTGACTTACAAGGACAGAGGCTACATTTCAGGTCAGCACCACATCCTGCCTaGCCCACACACGCACACGCC | + |
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Preference number: 4 (lower is better) Translates to: EMCGKSTDLQGQRLHFRSAPHPA*PTHAHA Trigger: GGCGTGTGCGTGTGTGGGGCAGGCAGGATGTGGTGC...TGACCTGAAATGTAGCCTCTGTCCTTGTAAGTCAGTTGACTTGCCGCACATCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| CDS-3UTR GCA 90 bp | GGCTACATTTCAGGTCATTTCAACTGCAACCAGTCGACCCTTTCCATTGAGGATACACACGCACACGCCTaGTCGCTGCGCAGGCCACCA | + |
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Preference number: 4 (lower is better) Translates to: GYISGHFNCNQSTLSIEDTHAHA*SLRRPP Trigger: TGGTGGCCTGCGCAGCGAGCAGGCGTGTGCGTGTGT...ATCCTCAATGGAAAGGGTCGACTGGTTGCAGTTGAAATGACCTGAAATGTAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| CDS-3UTR CCA 90 bp | GGCTACATTTCAGGTCATTTCAACTGCAACCAGTCGACCCTTTCCATTGAGGATCCACCACAGTCTGTCTaGGCCCAGCCAGCGCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: GYISGHFNCNQSTLSIEDPPQSV*AQPALD Trigger: GTCCAGCGCTGGCTGGGCCCAGACAGACTGTGGTGG...ATCCTCAATGGAAAGGGTCGACTGGTTGCAGTTGAAATGACCTGAAATGTAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| CDS-3UTR GCA 90 bp | GGCTACATTTCAGGTCATTTCAACTGCAACCAGTCGACCCTTTCCATTGAGGATGCCTGCACCACATCCTaGCTGCCCCACACACGCACA | + |
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Preference number: 4 (lower is better) Translates to: GYISGHFNCNQSTLSIEDACTTS*LPHTRT Trigger: TGTGCGTGTGTGGGGCAGGCAGGATGTGGTGCAGGC...ATCCTCAATGGAAAGGGTCGACTGGTTGCAGTTGAAATGACCTGAAATGTAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| CDS-3UTR CCA 90 bp | GGCTACATTTCAGGTCATTTCAACTGCAACCAGTCGACCCTTTCCATTGAGGATTGGTGCCGTGCTTCTTaGCGGCCGTCAGCTCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: GYISGHFNCNQSTLSIEDWCRAS*RPSAPA Trigger: AGCAGGAGCTGACGGCCGCCAAGAAGCACGGCACCA...ATCCTCAATGGAAAGGGTCGACTGGTTGCAGTTGAAATGACCTGAAATGTAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| CDS-3UTR CCA 90 bp | GGAGTGGGCCAGAGTGGTAAACACAGGGCCAATACACAGGTGATGGACAGAAACCTGGACCCCATTACATaGATCCAGCCCAGTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: GVGQSGKHRANTQVMDRNLDPIT*IQPSSP Trigger: TGGAGAACTGGGCTGGATCCATGTAATGGGGTCCAG...GTTTCTGTCCATCACCTGTGTATTGGCCCTGTGTTTACCACTCTGGCCCACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| CDS-3UTR CCA 90 bp | ACAGAGGCTACATTTCAGGTCATTTCAACTGCAACCAGTCGACCCTTTCCATTGGGGCCCAGCCAGCGCTaGACCCCATTACATGGATCC | + |
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Preference number: 4 (lower is better) Translates to: TEATFQVISTATSRPFPLGPSQR*TPLHGS Trigger: GGATCCATGTAATGGGGTCCAGCGCTGGCTGGGCCC...CAATGGAAAGGGTCGACTGGTTGCAGTTGAAATGACCTGAAATGTAGCCTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| CDS-3UTR CCA 90 bp | TCAACTGACTTACAAGGACAGAGGCTACATTTCAGGTCATTTCAACTGCAACCATCCCGAACACCGACATaGTTGCTGCTCGCCGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: STDLQGQRLHFRSFQLQPSRTPT*LLLAAP Trigger: CGGCGCGGCGAGCAGCAACCATGTCGGTGTTCGGGA...TGGTTGCAGTTGAAATGACCTGAAATGTAGCCTCTGTCCTTGTAAGTCAGTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| CDS-3UTR GCA 90 bp | TGCGGCAAGTCAACTGACTTACAAGGACAGAGGCTACATTTCAGGTCATTTCAACGCGCTTGTTTTTGGTaGCGTGCTTCTTGGCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: CGKSTDLQGQRLHFRSFQRACFW*RASWRP Trigger: CGGCCGCCAAGAAGCACGGCACCAAAAACAAGCGCG...TTGAAATGACCTGAAATGTAGCCTCTGTCCTTGTAAGTCAGTTGACTTGCCGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| CDS-3UTR GCA 90 bp | ACAGAGGCTACATTTCAGGTCATTTCAACTGCAACCAGTCGACCCTTTCCATTGCGCCCATCTCCCAGGTaGAGACCATGCTATGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: TEATFQVISTATSRPFPLRPSPR*RPCYAE Trigger: CTCTGCATAGCATGGTCTGCACCTGGGAGATGGGCG...CAATGGAAAGGGTCGACTGGTTGCAGTTGAAATGACCTGAAATGTAGCCTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| CDS-3UTR TCA 90 bp | GAGATGTGCGGCAAGTCAACTGACTTACAAGGACAGAGGCTACATTTCAGGTCAGGGCCAATACACAGGTaGTGGACAGAAACACAGCTC | + |
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Preference number: 4 (lower is better) Translates to: EMCGKSTDLQGQRLHFRSGPIHR*WTETQL Trigger: GAGCTGTGTTTCTGTCCATCACCTGTGTATTGGCCC...TGACCTGAAATGTAGCCTCTGTCCTTGTAAGTCAGTTGACTTGCCGCACATCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| CDS-3UTR GCA 90 bp | ACAGAGGCTACATTTCAGGTCATTTCAACTGCAACCAGTCGACCCTTTCCATTGTTGTTTTTGGTGCCGTaGTTCTTGGCGGCCGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: TEATFQVISTATSRPFPLLFLVP*FLAAVS Trigger: GCTGACGGCCGCCAAGAAGCACGGCACCAAAAACAA...CAATGGAAAGGGTCGACTGGTTGCAGTTGAAATGACCTGAAATGTAGCCTCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| CDS-3UTR CCA 90 bp | GGCTACATTTCAGGTCATTTCAACTGCAACCAGTCGACCCTTTCCATTGAGGATCAAGGGGGTGAGGAGTaGGCCAGAGTGGTAAACACA | + |
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Preference number: 4 (lower is better) Translates to: GYISGHFNCNQSTLSIEDQGGEE*ARVVNT Trigger: TGTGTTTACCACTCTGGCCCACTCCTCACCCCCTTG...ATCCTCAATGGAAAGGGTCGACTGGTTGCAGTTGAAATGACCTGAAATGTAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| CDS-3UTR GCA 90 bp | TCAACTGACTTACAAGGACAGAGGCTACATTTCAGGTCATTTCAACTGCAACCAGCGGCCGTCAGCTCCTaGTCGATTTTCTTCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: STDLQGQRLHFRSFQLQPAAVSS*SIFFSR Trigger: CCTGGAGAAGAAAATCGAGCAGGAGCTGACGGCCGC...TGGTTGCAGTTGAAATGACCTGAAATGTAGCCTCTGTCCTTGTAAGTCAGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| CDS-3UTR CCA 90 bp | GGACAGAGGCTACATTTCAGGTCATTTCAACTGCAACCAGTCGACCCTTTCCATCCTCTTCTTTCTTCTTaGCGGGTTTTGATGGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: GQRLHFRSFQLQPVDPFHPLLSS*RVLMVG Trigger: CCCTACCATCAAAACCCGCCAAGAAGAAAGAAGAGG...ATGGAAAGGGTCGACTGGTTGCAGTTGAAATGACCTGAAATGTAGCCTCTGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| CDS-3UTR CCA 90 bp | GAGATGTGCGGCAAGTCAACTGACTTACAAGGACAGAGGCTACATTTCAGGTCATTGAGGATTCAGCAGTaGAGTCAGCGTAGTCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: EMCGKSTDLQGQRLHFRSLRIQQ*SQRSPE Trigger: TTCTGGACTACGCTGACTCCACTGCTGAATCCTCAA...TGACCTGAAATGTAGCCTCTGTCCTTGTAAGTCAGTTGACTTGCCGCACATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| CDS-3UTR TCA 90 bp | TTGAAAAATGACTTTTCTGCCAGTACCGTACAAGTACACAAAGAGATGTGCGGCGTGCGGCAAGTCAACTaGCTTACAAGGACAGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: LKNDFSASTVQVHKEMCGVRQVN*LTRTEA Trigger: AGCCTCTGTCCTTGTAAGTCAGTTGACTTGCCGCAC...GCCGCACATCTCTTTGTGTACTTGTACGGTACTGGCAGAAAAGTCATTTTTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| CDS-3UTR GCA 90 bp | TTGAAAAATGACTTTTCTGCCAGTACCGTACAAGTACACAAAGAGATGTGCGGCTCAGGTCATTTCAACTaGAACCAGTCGACCCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: LKNDFSASTVQVHKEMCGSGHFN*NQSTLS Trigger: GGAAAGGGTCGACTGGTTGCAGTTGAAATGACCTGA...GCCGCACATCTCTTTGTGTACTTGTACGGTACTGGCAGAAAAGTCATTTTTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| CDS-3UTR GCA 90 bp | ACAGAGGCTACATTTCAGGTCATTTCAACTGCAACCAGTCGACCCTTTCCATTGGTACACAAAGAGATGTaGGGCAAGTCAACTGACTTA | + |
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Preference number: 4 (lower is better) Translates to: TEATFQVISTATSRPFPLVHKEM*GKSTDL Trigger: TAAGTCAGTTGACTTGCCGCACATCTCTTTGTGTAC...CAATGGAAAGGGTCGACTGGTTGCAGTTGAAATGACCTGAAATGTAGCCTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| CDS GCA 90 bp | ACCCCCTCCAGCCCCGAACAGCTTCCCGAACACCGACATGGTTGCTaGTCGCCGCGCCGGCCTTCGCCGCCCGCTCCGGCTCGGCTCGGC | + |
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Preference number: 5 (lower is better) Translates to: TPSSPEQLPEHRHGC*SPRRPSPPAPARLG Trigger: GCCGAGCCGAGCCGGAGCGGGCGGCGAAGGCCGGCGCGGCGAGCAGCAACCATGTCGGTGTTCGGGAAGCTGTTCGGGGCTGGAGGGGGT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| CDS-3UTR CAA 90 bp | GGACAGAGGCTACATTTCAGGTCATTTCAACTGCAACCAGTCGACCCTTTCCATCGAACACCGACATGGTaGCTGCTCGCCGCGCCGGCC | + |
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Preference number: 5 (lower is better) Translates to: GQRLHFRSFQLQPVDPFHRTPTW*LLAAPA Trigger: GGCCGGCGCGGCGAGCAGCAACCATGTCGGTGTTCG...ATGGAAAGGGTCGACTGGTTGCAGTTGAAATGACCTGAAATGTAGCCTCTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| CDS-3UTR CAA 90 bp | ACAGAGGCTACATTTCAGGTCATTTCAACTGCAACCAGTCGACCCTTTCCATTGTTGGTGCCGTGCTTCTaGGCGGCCGTCAGCTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: TEATFQVISTATSRPFPLLVPCF*AAVSSC Trigger: GCAGGAGCTGACGGCCGCCAAGAAGCACGGCACCAA...CAATGGAAAGGGTCGACTGGTTGCAGTTGAAATGACCTGAAATGTAGCCTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| CDS-3UTR CAA 90 bp | GGAGTGGGCCAGAGTGGTAAACACAGGGCCAATACACAGGTGATGGACAGAAACTCCTCTTCTTTCTTCTaGGCGGGTTTTGATGGTAGG | + |
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Preference number: 5 (lower is better) Translates to: GVGQSGKHRANTQVMDRNSSSFF*AGFDGR Trigger: CCTACCATCAAAACCCGCCAAGAAGAAAGAAGAGGA...GTTTCTGTCCATCACCTGTGTATTGGCCCTGTGTTTACCACTCTGGCCCACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| CDS CCA 72 bp | CCCCTCCAGCCCCGAACAGCTTCCCGAACACCGACATaGTTGCTGCTCGCCGCGCCGGCCTTCGCCGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: PLQPRTASRTPT*LLLAAPAFAAR Trigger: GCGGGCGGCGAAGGCCGGCGCGGCGAGCAGCAACCATGTCGGTGTTCGGGAAGCTGTTCGGGGCTGGAGGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| CDS GCA 72 bp | AGCCCCGAACAGCTTCCCGAACACCGACATGGTTGCTaGTCGCCGCGCCGGCCTTCGCCGCCCGCTCCGGCT | + |
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Preference number: 6 (lower is better) Translates to: SPEQLPEHRHGC*SPRRPSPPAPA Trigger: AGCCGGAGCGGGCGGCGAAGGCCGGCGCGGCGAGCAGCAACCATGTCGGTGTTCGGGAAGCTGTTCGGGGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| CDS GCA 72 bp | TCCAGCCCCGAACAGCTTCCCGAACACCGACATGGTTaGTGCTCGCCGCGCCGGCCTTCGCCGCCCGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: SSPEQLPEHRHG*CSPRRPSPPAP Trigger: CGGAGCGGGCGGCGAAGGCCGGCGCGGCGAGCAGCAACCATGTCGGTGTTCGGGAAGCTGTTCGGGGCTGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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| CDS CAA 72 bp | CTCCAGCCCCGAACAGCTTCCCGAACACCGACATGGTaGCTGCTCGCCGCGCCGGCCTTCGCCGCCCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LQPRTASRTPTW*LLAAPAFAARS Trigger: GGAGCGGGCGGCGAAGGCCGGCGCGGCGAGCAGCAACCATGTCGGTGTTCGGGAAGCTGTTCGGGGCTGGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000217402.3 |
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