Pregenerated sensors for CHMP2B (Homo sapiens)
Ensembl gene IDs: ENSG00000083937Ensembl transcript IDs: ENST00000263780.9, ENST00000466696.1, ENST00000471660.5, ENST00000472024.3, ENST00000494980.5, ENST00000676705.1, ENST00000676947.1, ENST00000677929.1, ENST00000678818.1, ENST00000678859.1
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | CTCCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTaGTCAGTATTAGCCCAAAATGTCCACCATCCCAAATTAACCAGG | + |
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Preference number: 2 (lower is better) Translates to: LLAIRVTCILVLRCI*SVLAQNVHHPKLTR Trigger: CCTGGTTAATTTGGGATGGTGGACATTTTGGGCTAATACTGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| 3UTR-3UTR GCA 90 bp | TTCCTCCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCATGCACAATAGGTCTGTaGTATTTAAGGCAGGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: FLLAIRVTCILVLRCILSCTIGL*YLRQVS Trigger: TGACACCTGCCTTAAATAGCACAGACCTATTGTGCA...TGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGGAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| 3UTR-3UTR CCA 90 bp | CCAAAATGTCCACCATCCCAAATTAACCAGGTTACACATATCTCCTCCAGTTTTCAACCCTCTTTAAGTTaGTGCCTAATGGCATTTAAC | + |
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Preference number: 2 (lower is better) Translates to: PKCPPSQINQVTHISSSFQPSLS*CLMAFN Trigger: GTTAAATGCCATTAGGCACCAACTTAAAGAGGGTTG...AAAACTGGAGGAGATATGTGTAACCTGGTTAATTTGGGATGGTGGACATTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| 3UTR-3UTR GCA 90 bp | TTCCTCCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCACCCTCTTTAAGTTGGTaGCTAATGGCATTTAACAAG | + |
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Preference number: 2 (lower is better) Translates to: FLLAIRVTCILVLRCILSPSLSW*LMAFNK Trigger: CTTGTTAAATGCCATTAGGCACCAACTTAAAGAGGG...TGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGGAGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| 3UTR-3UTR GCA 90 bp | CCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCAGTATTTGCACAATAGGTCTGTaGTATTTAAGGCAGGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: PSNPCHMYTSPKMYFVSICTIGL*YLRQVS Trigger: TGACACCTGCCTTAAATAGCACAGACCTATTGTGCA...AATACTGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| 3UTR-3UTR GCA 90 bp | CCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCAGTATTCCCTCTTTAAGTTGGTaGCTAATGGCATTTAACAAG | + |
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Preference number: 2 (lower is better) Translates to: PSNPCHMYTSPKMYFVSIPSLSW*LMAFNK Trigger: CTTGTTAAATGCCATTAGGCACCAACTTAAAGAGGG...AATACTGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| 3UTR-3UTR CCA 90 bp | CCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCAGTATTCAACCCTCTTTAAGTTaGTGCCTAATGGCATTTAAC | + |
|
Preference number: 2 (lower is better) Translates to: PSNPCHMYTSPKMYFVSIQPSLS*CLMAFN Trigger: GTTAAATGCCATTAGGCACCAACTTAAAGAGGGTTG...AATACTGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| 3UTR-3UTR GCA 90 bp | TCATTTTATCTCCCTGTCTACACATTCATTAGATACCAAGGCAATTTCACCTTACCCTCTTTAAGTTGGTaGCTAATGGCATTTAACAAG | + |
|
Preference number: 2 (lower is better) Translates to: SFYLPVYTFIRYQGNFTLPSLSW*LMAFNK Trigger: CTTGTTAAATGCCATTAGGCACCAACTTAAAGAGGG...TAAGGTGAAATTGCCTTGGTATCTAATGAATGTGTAGACAGGGAGATAAAATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| 3UTR-3UTR CCA 90 bp | TCATTTTATCTCCCTGTCTACACATTCATTAGATACCAAGGCAATTTCACCTTACAACCCTCTTTAAGTTaGTGCCTAATGGCATTTAAC | + |
|
Preference number: 2 (lower is better) Translates to: SFYLPVYTFIRYQGNFTLQPSLS*CLMAFN Trigger: GTTAAATGCCATTAGGCACCAACTTAAAGAGGGTTG...TAAGGTGAAATTGCCTTGGTATCTAATGAATGTGTAGACAGGGAGATAAAATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| 3UTR-3UTR CAA 90 bp | CCAAAATGTCCACCATCCCAAATTAACCAGGTTACACATATCTCCTCCAGTTTTCCCATTTTTGCATCATaGTCATTCTTTGGCAAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: PKCPPSQINQVTHISSSFPIFAS*SFFGKR Trigger: TCTTTTGCCAAAGAATGACAATGATGCAAAAATGGG...AAAACTGGAGGAGATATGTGTAACCTGGTTAATTTGGGATGGTGGACATTTTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| 3UTR-3UTR CAA 90 bp | CCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCAGTATTCCCATTTTTGCATCATaGTCATTCTTTGGCAAAAGA | + |
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Preference number: 3 (lower is better) Translates to: PSNPCHMYTSPKMYFVSIPIFAS*SFFGKR Trigger: TCTTTTGCCAAAGAATGACAATGATGCAAAAATGGG...AATACTGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| 3UTR-3UTR CAA 90 bp | TCATTTTATCTCCCTGTCTACACATTCATTAGATACCAAGGCAATTTCACCTTACCCATTTTTGCATCATaGTCATTCTTTGGCAAAAGA | + |
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Preference number: 3 (lower is better) Translates to: SFYLPVYTFIRYQGNFTLPIFAS*SFFGKR Trigger: TCTTTTGCCAAAGAATGACAATGATGCAAAAATGGG...TAAGGTGAAATTGCCTTGGTATCTAATGAATGTGTAGACAGGGAGATAAAATGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| CDS-3UTR CCA 90 bp | CCAAAATGTCCACCATCCCAAATTAACCAGGTTACACATATCTCCTCCAGTTTTTTGGCGGGTTCGGGGTaGCGGAGCGGAGAGACAGCA | + |
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Preference number: 4 (lower is better) Translates to: PKCPPSQINQVTHISSSFLAGSG*RSGETA Trigger: TGCTGTCTCTCCGCTCCGCCACCCCGAACCCGCCAA...AAAACTGGAGGAGATATGTGTAACCTGGTTAATTTGGGATGGTGGACATTTTGG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| CDS-3UTR CCA 90 bp | TTCCTCCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCATTGGCGGGTTCGGGGTaGCGGAGCGGAGAGACAGCA | + |
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Preference number: 4 (lower is better) Translates to: FLLAIRVTCILVLRCILSLAGSG*RSGETA Trigger: TGCTGTCTCTCCGCTCCGCCACCCCGAACCCGCCAA...TGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGGAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| CDS-3UTR CCA 90 bp | CCAAAATGTCCACCATCCCAAATTAACCAGGTTACACATATCTCCTCCAGTTTTAAAAGGACAGGACCTTaGCGGGTTCGGGGTGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: PKCPPSQINQVTHISSSFKRTGP*RVRGGG Trigger: TCCGCCACCCCGAACCCGCCAAGGTCCTGTCCTTTT...AAAACTGGAGGAGATATGTGTAACCTGGTTAATTTGGGATGGTGGACATTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| CDS-3UTR TCA 90 bp | CCAAAATGTCCACCATCCCAAATTAACCAGGTTACACATATCTCCTCCAGTTTTCACCCGGAGCTCAGGTaGCCGGGAACTAACACACTT | + |
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Preference number: 4 (lower is better) Translates to: PKCPPSQINQVTHISSSFHPELR*PGTNTL Trigger: AAGTGTGTTAGTTCCCGGTCACCTGAGCTCCGGGTG...AAAACTGGAGGAGATATGTGTAACCTGGTTAATTTGGGATGGTGGACATTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471660.5 |
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| CDS-3UTR CCA 90 bp | TCATTTTATCTCCCTGTCTACACATTCATTAGATACCAAGGCAATTTCACCTTATTGGCGGGTTCGGGGTaGCGGAGCGGAGAGACAGCA | + |
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Preference number: 4 (lower is better) Translates to: SFYLPVYTFIRYQGNFTLLAGSG*RSGETA Trigger: TGCTGTCTCTCCGCTCCGCCACCCCGAACCCGCCAA...TAAGGTGAAATTGCCTTGGTATCTAATGAATGTGTAGACAGGGAGATAAAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| CDS-3UTR GCA 90 bp | CCAAAATGTCCACCATCCCAAATTAACCAGGTTACACATATCTCCTCCAGTTTTGTTGAGCCGAGATCATaGCATTGCACTCCAGCACTC | + |
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Preference number: 4 (lower is better) Translates to: PKCPPSQINQVTHISSSFVEPRS*HCTPAL Trigger: GAGTGCTGGAGTGCAATGGCATGATCTCGGCTCAAC...AAAACTGGAGGAGATATGTGTAACCTGGTTAATTTGGGATGGTGGACATTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000472024.3 ENST00000676705.1 |
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| CDS-3UTR CCA 90 bp | TCATTTTATCTCCCTGTCTACACATTCATTAGATACCAAGGCAATTTCACCTTAAAAAGGACAGGACCTTaGCGGGTTCGGGGTGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: SFYLPVYTFIRYQGNFTLKRTGP*RVRGGG Trigger: TCCGCCACCCCGAACCCGCCAAGGTCCTGTCCTTTT...TAAGGTGAAATTGCCTTGGTATCTAATGAATGTGTAGACAGGGAGATAAAATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| CDS-3UTR TCA 90 bp | CCAAAATGTCCACCATCCCAAATTAACCAGGTTACACATATCTCCTCCAGTTTTCCACGGTTTTCTTCTTaGAGAGGGACGCCATGGTTA | + |
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Preference number: 4 (lower is better) Translates to: PKCPPSQINQVTHISSSFPRFSS*RGTPWL Trigger: TAACCATGGCGTCCCTCTTCAAGAAGAAAACCGTGG...AAAACTGGAGGAGATATGTGTAACCTGGTTAATTTGGGATGGTGGACATTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| CDS-3UTR GCA 90 bp | TTCCTCCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCAGTTGAGCCGAGATCATaGCATTGCACTCCAGCACTC | + |
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Preference number: 4 (lower is better) Translates to: FLLAIRVTCILVLRCILSVEPRS*HCTPAL Trigger: GAGTGCTGGAGTGCAATGGCATGATCTCGGCTCAAC...TGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGGAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000472024.3 ENST00000676705.1 |
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| CDS-3UTR TCA 90 bp | CCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCAGTATTCCACGGTTTTCTTCTTaGAGAGGGACGCCATGGTTA | + |
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Preference number: 4 (lower is better) Translates to: PSNPCHMYTSPKMYFVSIPRFSS*RGTPWL Trigger: TAACCATGGCGTCCCTCTTCAAGAAGAAAACCGTGG...AATACTGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| CDS-3UTR TCA 90 bp | CCAAAATGTCCACCATCCCAAATTAACCAGGTTACACATATCTCCTCCAGTTTTCTACTCCTAAAGCCTTaGGTTGCCGTTCAATCTCTT | + |
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Preference number: 4 (lower is better) Translates to: PKCPPSQINQVTHISSSFLLLKP*VAVQSL Trigger: AAGAGATTGAACGGCAACTCAAGGCTTTAGGAGTAG...AAAACTGGAGGAGATATGTGTAACCTGGTTAATTTGGGATGGTGGACATTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| CDS-3UTR GCA 90 bp | CCAAAATGTCCACCATCCCAAATTAACCAGGTTACACATATCTCCTCCAGTTTTTGCCTGCATTGTTTTTaGTGTAGTAGACATTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PKCPPSQINQVTHISSSFCLHCF*CSRHCS Trigger: GGAGCAATGTCTACTACAGCAAAAACAATGCAGGCA...AAAACTGGAGGAGATATGTGTAACCTGGTTAATTTGGGATGGTGGACATTTTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| CDS-3UTR GCA 90 bp | CCAAAATGTCCACCATCCCAAATTAACCAGGTTACACATATCTCCTCCAGTTTTCCTAAAGCCTTGAGTTaGCGTTCAATCTCTTCATCT | + |
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Preference number: 4 (lower is better) Translates to: PKCPPSQINQVTHISSSFPKALS*RSISSS Trigger: AGATGAAGAGATTGAACGGCAACTCAAGGCTTTAGG...AAAACTGGAGGAGATATGTGTAACCTGGTTAATTTGGGATGGTGGACATTTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| CDS-3UTR GCA 90 bp | CCAAAATGTCCACCATCCCAAATTAACCAGGTTACACATATCTCCTCCAGTTTTTGCACAATAGGTCTGTaGTATTTAAGGCAGGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: PKCPPSQINQVTHISSSFCTIGL*YLRQVS Trigger: TGACACCTGCCTTAAATAGCACAGACCTATTGTGCA...AAAACTGGAGGAGATATGTGTAACCTGGTTAATTTGGGATGGTGGACATTTTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| CDS-3UTR CCA 90 bp | CCAAAATGTCCACCATCCCAAATTAACCAGGTTACACATATCTCCTCCAGTTTTCAGCTGATGGAGCTTTaGCCATCTTTCCAGAAATTT | + |
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Preference number: 4 (lower is better) Translates to: PKCPPSQINQVTHISSSFQLMEL*PSFQKF Trigger: AAATTTCTGGAAAGATGGCCAAAGCTCCATCAGCTG...AAAACTGGAGGAGATATGTGTAACCTGGTTAATTTGGGATGGTGGACATTTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| CDS-3UTR GCA 90 bp | CCAAAATGTCCACCATCCCAAATTAACCAGGTTACACATATCTCCTCCAGTTTTCCCTCTTTAAGTTGGTaGCTAATGGCATTTAACAAG | + |
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Preference number: 4 (lower is better) Translates to: PKCPPSQINQVTHISSSFPSLSW*LMAFNK Trigger: CTTGTTAAATGCCATTAGGCACCAACTTAAAGAGGG...AAAACTGGAGGAGATATGTGTAACCTGGTTAATTTGGGATGGTGGACATTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| CDS-3UTR CCA 90 bp | TTCCTCCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCACAGCTGATGGAGCTTTaGCCATCTTTCCAGAAATTT | + |
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Preference number: 4 (lower is better) Translates to: FLLAIRVTCILVLRCILSQLMEL*PSFQKF Trigger: AAATTTCTGGAAAGATGGCCAAAGCTCCATCAGCTG...TGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGGAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| CDS-3UTR TCA 90 bp | TCATTTTATCTCCCTGTCTACACATTCATTAGATACCAAGGCAATTTCACCTTACTACTCCTAAAGCCTTaGGTTGCCGTTCAATCTCTT | + |
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Preference number: 4 (lower is better) Translates to: SFYLPVYTFIRYQGNFTLLLLKP*VAVQSL Trigger: AAGAGATTGAACGGCAACTCAAGGCTTTAGGAGTAG...TAAGGTGAAATTGCCTTGGTATCTAATGAATGTGTAGACAGGGAGATAAAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| CDS-3UTR GCA 90 bp | CCAAAATGTCCACCATCCCAAATTAACCAGGTTACACATATCTCCTCCAGTTTTTTCTGTTTCCGTAGATaGACAAGTTGTTTGGCTAAA | + |
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Preference number: 4 (lower is better) Translates to: PKCPPSQINQVTHISSSFFCFRR*TSCLAK Trigger: TTTAGCCAAACAACTTGTGCATCTACGGAAACAGAA...AAAACTGGAGGAGATATGTGTAACCTGGTTAATTTGGGATGGTGGACATTTTGG 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| CDS-3UTR GCA 90 bp | CCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCAGTATTCCTAAAGCCTTGAGTTaGCGTTCAATCTCTTCATCT | + |
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Preference number: 4 (lower is better) Translates to: PSNPCHMYTSPKMYFVSIPKALS*RSISSS Trigger: AGATGAAGAGATTGAACGGCAACTCAAGGCTTTAGG...AATACTGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| CDS-3UTR CCA 90 bp | CCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCAGTATTCAGCTGATGGAGCTTTaGCCATCTTTCCAGAAATTT | + |
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Preference number: 4 (lower is better) Translates to: PSNPCHMYTSPKMYFVSIQLMEL*PSFQKF Trigger: AAATTTCTGGAAAGATGGCCAAAGCTCCATCAGCTG...AATACTGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| CDS-3UTR CCA 90 bp | TTCCTCCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCACAACCCTCTTTAAGTTaGTGCCTAATGGCATTTAAC | + |
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Preference number: 4 (lower is better) Translates to: FLLAIRVTCILVLRCILSQPSLS*CLMAFN Trigger: GTTAAATGCCATTAGGCACCAACTTAAAGAGGGTTG...TGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGGAGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| 3UTR CAA 72 bp | ATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTaGTCAGTATTAGCCCAAAATGTCCACCATCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: IRVTCILVLRCI*SVLAQNVHHPK Trigger: TTTGGGATGGTGGACATTTTGGGCTAATACTGACAAAATACATCTTAGGACTAGTATACATGTGACACGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| CDS-3UTR GCA 90 bp | TTCCTCCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCATTCTGTTTCCGTAGATaGACAAGTTGTTTGGCTAAA | + |
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Preference number: 4 (lower is better) Translates to: FLLAIRVTCILVLRCILSFCFRR*TSCLAK Trigger: TTTAGCCAAACAACTTGTGCATCTACGGAAACAGAA...TGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGGAGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| CDS-3UTR GCA 90 bp | TCATTTTATCTCCCTGTCTACACATTCATTAGATACCAAGGCAATTTCACCTTATGCCTGCATTGTTTTTaGTGTAGTAGACATTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SFYLPVYTFIRYQGNFTLCLHCF*CSRHCS Trigger: GGAGCAATGTCTACTACAGCAAAAACAATGCAGGCA...TAAGGTGAAATTGCCTTGGTATCTAATGAATGTGTAGACAGGGAGATAAAATGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| CDS-3UTR GCA 90 bp | TCATTTTATCTCCCTGTCTACACATTCATTAGATACCAAGGCAATTTCACCTTACCTAAAGCCTTGAGTTaGCGTTCAATCTCTTCATCT | + |
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Preference number: 4 (lower is better) Translates to: SFYLPVYTFIRYQGNFTLPKALS*RSISSS Trigger: AGATGAAGAGATTGAACGGCAACTCAAGGCTTTAGG...TAAGGTGAAATTGCCTTGGTATCTAATGAATGTGTAGACAGGGAGATAAAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| CDS-3UTR GCA 90 bp | TCATTTTATCTCCCTGTCTACACATTCATTAGATACCAAGGCAATTTCACCTTATGCACAATAGGTCTGTaGTATTTAAGGCAGGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: SFYLPVYTFIRYQGNFTLCTIGL*YLRQVS Trigger: TGACACCTGCCTTAAATAGCACAGACCTATTGTGCA...TAAGGTGAAATTGCCTTGGTATCTAATGAATGTGTAGACAGGGAGATAAAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| CDS-3UTR CCA 90 bp | TTCCTCCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCAGATGCACAAGTTGTTTaGCTAAAACTTTGCAAGCTT | + |
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Preference number: 4 (lower is better) Translates to: FLLAIRVTCILVLRCILSDAQVV*LKLCKL Trigger: AAGCTTGCAAAGTTTTAGCCAAACAACTTGTGCATC...TGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGGAGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| CDS-3UTR CCA 90 bp | TTCCTCCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCACCAGCCATCTTCATTTaGGAATTCATCACTTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FLLAIRVTCILVLRCILSPAIFI*EFITFV Trigger: AACAAAAGTGATGAATTCCCAAATGAAGATGGCTGG...TGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGGAGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
||
| CDS-3UTR GCA 90 bp | CCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCAGTATTTTCTGTTTCCGTAGATaGACAAGTTGTTTGGCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: PSNPCHMYTSPKMYFVSIFCFRR*TSCLAK Trigger: TTTAGCCAAACAACTTGTGCATCTACGGAAACAGAA...AATACTGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
||
| CDS-3UTR GCA 90 bp | TTCCTCCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCATTCTTGTTAACTGCCTaGATTGTTTTTGCTGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FLLAIRVTCILVLRCILSFLLTA*IVFAVV Trigger: TACTACAGCAAAAACAATGCAGGCAGTTAACAAGAA...TGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGGAGGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
||
| CDS-3UTR GCA 90 bp | CCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCAGTATTCATCTTCTTGTTAACTaGCTGCATTGTTTTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSNPCHMYTSPKMYFVSIHLLVN*LHCFCC Trigger: ACAGCAAAAACAATGCAGGCAGTTAACAAGAAGATG...AATACTGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
||
| CDS-3UTR CCA 90 bp | CCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCAGTATTGATGCACAAGTTGTTTaGCTAAAACTTTGCAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSNPCHMYTSPKMYFVSIDAQVV*LKLCKL Trigger: AAGCTTGCAAAGTTTTAGCCAAACAACTTGTGCATC...AATACTGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
||
| CDS-3UTR CCA 90 bp | CCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCAGTATTCCAGCCATCTTCATTTaGGAATTCATCACTTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PSNPCHMYTSPKMYFVSIPAIFI*EFITFV Trigger: AACAAAAGTGATGAATTCCCAAATGAAGATGGCTGG...AATACTGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
||
| CDS-3UTR GCA 90 bp | CCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCAGTATTTTCTTGTTAACTGCCTaGATTGTTTTTGCTGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PSNPCHMYTSPKMYFVSIFLLTA*IVFAVV Trigger: TACTACAGCAAAAACAATGCAGGCAGTTAACAAGAA...AATACTGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
||
| CDS-3UTR GCA 90 bp | TCATTTTATCTCCCTGTCTACACATTCATTAGATACCAAGGCAATTTCACCTTACATCTTCTTGTTAACTaGCTGCATTGTTTTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SFYLPVYTFIRYQGNFTLHLLVN*LHCFCC Trigger: ACAGCAAAAACAATGCAGGCAGTTAACAAGAAGATG...TAAGGTGAAATTGCCTTGGTATCTAATGAATGTGTAGACAGGGAGATAAAATGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
||
| CDS-3UTR GCA 90 bp | TCATTTTATCTCCCTGTCTACACATTCATTAGATACCAAGGCAATTTCACCTTATTCTTGTTAACTGCCTaGATTGTTTTTGCTGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SFYLPVYTFIRYQGNFTLFLLTA*IVFAVV Trigger: TACTACAGCAAAAACAATGCAGGCAGTTAACAAGAA...TAAGGTGAAATTGCCTTGGTATCTAATGAATGTGTAGACAGGGAGATAAAATGA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
||
| CDS GCA 90 bp | CCATCCACGGTTTTCTTCTTGAAGAGGGACGCCATGGTTAAAGACTaGGCCCGGGCGGCCCGGCTCGGCCCGGTCCGGCCCAACGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PSTVFFLKRDAMVKD*ARAARLGPVRPNAG Trigger: GCCAGCGTTGGGCCGGACCGGGCCGAGCCGGGCCGCCCGGGCGCAGTCTTTAACCATGGCGTCCCTCTTCAAGAAGAAAACCGTGGATGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471660.5 |
||
| CDS GCA 90 bp | TCATCCACGGTTTTCTTCTTGAAGAGGGACGCCATGGTTAAAGACTaGGCCCGGGCGGCCCGGCTCGGCCCGGTCCGGCCCAACGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSTVFFLKRDAMVKD*ARAARLGPVRPNAG Trigger: GCCAGCGTTGGGCCGGACCGGGCCGAGCCGGGCCGCCCGGGCGCAGTCTTTAACCATGGCGTCCCTCTTCAAGAAGAAAACCGTGGATGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000263780.9 ENST00000472024.3 ENST00000494980.5 ENST00000676705.1 ENST00000676947.1 ENST00000677929.1 ENST00000678859.1 |
||
| CDS CCA 90 bp | TCCGGCCCAACGCTGGCAAAGGACAGGAGGAAAAGGACAGGACCTTaGCGGGTTCGGGGTGGCGGAGCGGAGAGACAGCAGGAGGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SGPTLAKDRRKRTGP*RVRGGGAERQQEEV Trigger: GACCTCCTCCTGCTGTCTCTCCGCTCCGCCACCCCGAACCCGCCAAGGTCCTGTCCTTTTCCTCCTGTCCTTTGCCAGCGTTGGGCCGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000494980.5 ENST00000676705.1 ENST00000676947.1 ENST00000677929.1 ENST00000678859.1 |
||
| CDS TCA 90 bp | GGCTTGTATCCGCAGCTACCGCAGCCGCGTCACCCGGAGCTCAGGTaGCCGGGAACTAACACACTTTTTGGAGAAGTCACTTCTAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GLYPQLPQPRHPELR*PGTNTLFGEVTSRR Trigger: CCGCCTAGAAGTGACTTCTCCAAAAAGTGTGTTAGTTCCCGGTCACCTGAGCTCCGGGTGACGCGGCTGCGGTAGCTGCGGATACAAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000471660.5 |
||
| CDS-3UTR CAA 90 bp | CCAAAATGTCCACCATCCCAAATTAACCAGGTTACACATATCTCCTCCAGTTTTGGACCCGCGGAAGGCTaGTATCCGCAGCTACCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PKCPPSQINQVTHISSSFGPAEG*YPQLPQ Trigger: CTGCGGTAGCTGCGGATACAAGCCTTCCGCGGGTCC...AAAACTGGAGGAGATATGTGTAACCTGGTTAATTTGGGATGGTGGACATTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
||
| CDS-3UTR CAA 90 bp | CCAAAATGTCCACCATCCCAAATTAACCAGGTTACACATATCTCCTCCAGTTTTGAAAAGGACAGGACCTaGGCGGGTTCGGGGTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PKCPPSQINQVTHISSSFEKDRT*AGSGWR Trigger: CCGCCACCCCGAACCCGCCAAGGTCCTGTCCTTTTC...AAAACTGGAGGAGATATGTGTAACCTGGTTAATTTGGGATGGTGGACATTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
||
| CDS-3UTR CAA 90 bp | TTCCTCCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCAGAAAAGGACAGGACCTaGGCGGGTTCGGGGTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: FLLAIRVTCILVLRCILSEKDRT*AGSGWR Trigger: CCGCCACCCCGAACCCGCCAAGGTCCTGTCCTTTTC...TGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGGAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
||
| CDS-3UTR CAA 90 bp | CCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCAGTATTGGACCCGCGGAAGGCTaGTATCCGCAGCTACCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PSNPCHMYTSPKMYFVSIGPAEG*YPQLPQ Trigger: CTGCGGTAGCTGCGGATACAAGCCTTCCGCGGGTCC...AATACTGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
||
| CDS-3UTR CAA 90 bp | CCAAAATGTCCACCATCCCAAATTAACCAGGTTACACATATCTCCTCCAGTTTTGCCGAGATCATGCCATaGCACTCCAGCACTCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PKCPPSQINQVTHISSSFAEIMP*HSSTPA Trigger: GGCTGGAGTGCTGGAGTGCAATGGCATGATCTCGGC...AAAACTGGAGGAGATATGTGTAACCTGGTTAATTTGGGATGGTGGACATTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000472024.3 ENST00000676705.1 |
||
| CDS-3UTR CAA 90 bp | TCATTTTATCTCCCTGTCTACACATTCATTAGATACCAAGGCAATTTCACCTTAGCCGAGATCATGCCATaGCACTCCAGCACTCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SFYLPVYTFIRYQGNFTLAEIMP*HSSTPA Trigger: GGCTGGAGTGCTGGAGTGCAATGGCATGATCTCGGC...TAAGGTGAAATTGCCTTGGTATCTAATGAATGTGTAGACAGGGAGATAAAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000472024.3 ENST00000676705.1 |
||
| CDS-3UTR CAA 90 bp | TTCCTCCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCATCCACGGTTTTCTTCTaGAAGAGGGACGCCATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: FLLAIRVTCILVLRCILSSTVFF*KRDAMV Trigger: AACCATGGCGTCCCTCTTCAAGAAGAAAACCGTGGA...TGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGGAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
||
| CDS TCA 90 bp | CTTCTTCGTCATCAGAACCGTCAAAGATGTCATCAAGTGTATCATTaGCTAGGGGATATGGGAGAAGGAGCAAAGCAGTTACTTTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LLRHQNRQRCHQVYH*LGDMGEGAKQLLSN Trigger: GTTTGAAAGTAACTGCTTTGCTCCTTCTCCCATATCCCCTAGTCAATGATACACTTGATGACATCTTTGACGGTTCTGATGACGAAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000466696.1 ENST00000677929.1 ENST00000678859.1 |
||
| CDS CCA 90 bp | AAGGAGATCACATCCAACTGGGAGGAAGTTACATGTGAAGTAATCTaGCAAGGATACGTAGGGTTTAACCACACAGAGATACATAAATGG | + |
|
Preference number: 5 (lower is better) Translates to: KEITSNWEEVTCEVI*QGYVGFNHTEIHKW Trigger: CCATTTATGTATCTCTGTGTGGTTAAACCCTACGTATCCTTGCCAGATTACTTCACATGTAACTTCCTCCCAGTTGGATGTGATCTCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000677929.1 ENST00000678859.1 |
||
| CDS-3UTR CAA 90 bp | TTCCTCCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCAGCAGCTGATGGAGCTTaGGCCATCTTTCCAGAAATT | + |
|
Preference number: 5 (lower is better) Translates to: FLLAIRVTCILVLRCILSAADGA*AIFPEI Trigger: AATTTCTGGAAAGATGGCCAAAGCTCCATCAGCTGC...TGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGGAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
||
| CDS-3UTR CAA 90 bp | CCAAAATGTCCACCATCCCAAATTAACCAGGTTACACATATCTCCTCCAGTTTTTCTACTCCTAAAGCCTaGAGTTGCCGTTCAATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PKCPPSQINQVTHISSSFSTPKA*SCRSIS Trigger: AGAGATTGAACGGCAACTCAAGGCTTTAGGAGTAGA...AAAACTGGAGGAGATATGTGTAACCTGGTTAATTTGGGATGGTGGACATTTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
||
| CDS-3UTR CAA 90 bp | CCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCAGTATTGCAGCTGATGGAGCTTaGGCCATCTTTCCAGAAATT | + |
|
Preference number: 5 (lower is better) Translates to: PSNPCHMYTSPKMYFVSIAADGA*AIFPEI Trigger: AATTTCTGGAAAGATGGCCAAAGCTCCATCAGCTGC...AATACTGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
||
| CDS-3UTR CAA 90 bp | TTCCTCCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCATCTACTCCTAAAGCCTaGAGTTGCCGTTCAATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FLLAIRVTCILVLRCILSSTPKA*SCRSIS Trigger: AGAGATTGAACGGCAACTCAAGGCTTTAGGAGTAGA...TGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGGAGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
||
| CDS CCA 90 bp | CAGCAAAAGTTCTCGTCTTCTGTTTCCGTAGATGCACAAGTTGTTTaGCTAAAACTTTGCAAGCTTCCTTATTACCAATCTTGGCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: QQKFSSSVSVDAQVV*LKLCKLPYYQSWPF Trigger: AAATGGCCAAGATTGGTAATAAGGAAGCTTGCAAAGTTTTAGCCAAACAACTTGTGCATCTACGGAAACAGAAGACGAGAACTTTTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 ENST00000676947.1 ENST00000677929.1 ENST00000678859.1 |
||
| CDS-3UTR CAA 90 bp | CCAAAATGTCCACCATCCCAAATTAACCAGGTTACACATATCTCCTCCAGTTTTAGATGCACAAGTTGTTaGGCTAAAACTTTGCAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PKCPPSQINQVTHISSSFRCTSC*AKTLQA Trigger: AGCTTGCAAAGTTTTAGCCAAACAACTTGTGCATCT...AAAACTGGAGGAGATATGTGTAACCTGGTTAATTTGGGATGGTGGACATTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
||
| CDS-3UTR CAA 90 bp | TTCCTCCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCATGTGGATCCATCTTCTaGTTAACTGCCTGCATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: FLLAIRVTCILVLRCILSCGSIF*LTACIV Trigger: AACAATGCAGGCAGTTAACAAGAAGATGGATCCACA...TGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGGAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
||
| CDS-3UTR CAA 90 bp | TCATTTTATCTCCCTGTCTACACATTCATTAGATACCAAGGCAATTTCACCTTAGCAGCTGATGGAGCTTaGGCCATCTTTCCAGAAATT | + |
|
Preference number: 5 (lower is better) Translates to: SFYLPVYTFIRYQGNFTLAADGA*AIFPEI Trigger: AATTTCTGGAAAGATGGCCAAAGCTCCATCAGCTGC...TAAGGTGAAATTGCCTTGGTATCTAATGAATGTGTAGACAGGGAGATAAAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
||
| CDS-3UTR CAA 90 bp | TTCCTCCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCAGAACTAACACACTTTTaGGAGAAGTCACTTCTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FLLAIRVTCILVLRCILSELTHF*EKSLLG Trigger: GCCTAGAAGTGACTTCTCCAAAAAGTGTGTTAGTTC...TGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGGAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471660.5 |
||
| CDS CCA 90 bp | GTGAGGCAACAGGGACACAAGCAAGAAGGAATAAGTTCTTCTGTTTaGTTGTTATTTAAGGTACATAAATGGCAAATGTCTGGGAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: VRQQGHKQEGISSSV*LLFKVHKWQMSGRK Trigger: TTTTCTCCCAGACATTTGCCATTTATGTACCTTAAATAACAACCAAACAGAAGAACTTATTCCTTCTTGCTTGTGTCCCTGTTGCCTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000677929.1 ENST00000678859.1 |
||
| CDS-3UTR CAA 90 bp | CCAAAATGTCCACCATCCCAAATTAACCAGGTTACACATATCTCCTCCAGTTTTTGTTTGGCTAAAACTTaGCAAGCTTCCTTATTACCA | + |
|
Preference number: 5 (lower is better) Translates to: PKCPPSQINQVTHISSSFCLAKT*QASLLP Trigger: TGGTAATAAGGAAGCTTGCAAAGTTTTAGCCAAACA...AAAACTGGAGGAGATATGTGTAACCTGGTTAATTTGGGATGGTGGACATTTTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
||
| CDS-3UTR CAA 90 bp | TTCCTCCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCATCCAGCCATCTTCATTaGGGAATTCATCACTTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: FLLAIRVTCILVLRCILSSSHLH*GIHHFC Trigger: ACAAAAGTGATGAATTCCCAAATGAAGATGGCTGGA...TGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGGAGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
||
| CDS-3UTR CAA 90 bp | CCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCAGTATTTGTGGATCCATCTTCTaGTTAACTGCCTGCATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PSNPCHMYTSPKMYFVSICGSIF*LTACIV Trigger: AACAATGCAGGCAGTTAACAAGAAGATGGATCCACA...AATACTGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
||
| CDS-3UTR CAA 90 bp | TCATTTTATCTCCCTGTCTACACATTCATTAGATACCAAGGCAATTTCACCTTATCTACTCCTAAAGCCTaGAGTTGCCGTTCAATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SFYLPVYTFIRYQGNFTLSTPKA*SCRSIS Trigger: AGAGATTGAACGGCAACTCAAGGCTTTAGGAGTAGA...TAAGGTGAAATTGCCTTGGTATCTAATGAATGTGTAGACAGGGAGATAAAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
||
| CDS TCA 90 bp | TTGGCCATCTTTCCAGAAATTTCAATTCCAATTTCATCAAGAACTTaGTTCACAATATCCTGGCTTTCTTCTTCGTCATCAGAACCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LAIFPEISIPISSRT*FTISWLSSSSSEPS Trigger: TGACGGTTCTGATGACGAAGAAGAAAGCCAGGATATTGTGAATCAAGTTCTTGATGAAATTGGAATTGAAATTTCTGGAAAGATGGCCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000263780.9 ENST00000466696.1 ENST00000471660.5 ENST00000472024.3 ENST00000494980.5 ENST00000676705.1 ENST00000677929.1 ENST00000678859.1 |
||
| CDS-3UTR CAA 90 bp | CCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCAGTATTAGATGCACAAGTTGTTaGGCTAAAACTTTGCAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PSNPCHMYTSPKMYFVSIRCTSC*AKTLQA Trigger: AGCTTGCAAAGTTTTAGCCAAACAACTTGTGCATCT...AATACTGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
||
| CDS-3UTR CAA 90 bp | CCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCAGTATTTCCAGCCATCTTCATTaGGGAATTCATCACTTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: PSNPCHMYTSPKMYFVSISSHLH*GIHHFC Trigger: ACAAAAGTGATGAATTCCCAAATGAAGATGGCTGGA...AATACTGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
||
| CDS-3UTR CAA 90 bp | CCTAGCAATCCGTGTCACATGTATACTAGTCCTAAGATGTATTTTGTCAGTATTTGTTTGGCTAAAACTTaGCAAGCTTCCTTATTACCA | + |
|
Preference number: 5 (lower is better) Translates to: PSNPCHMYTSPKMYFVSICLAKT*QASLLP Trigger: TGGTAATAAGGAAGCTTGCAAAGTTTTAGCCAAACA...AATACTGACAAAATACATCTTAGGACTAGTATACATGTGACACGGATTGCTAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
||
| CDS-3UTR CAA 90 bp | TCATTTTATCTCCCTGTCTACACATTCATTAGATACCAAGGCAATTTCACCTTAAGATGCACAAGTTGTTaGGCTAAAACTTTGCAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SFYLPVYTFIRYQGNFTLRCTSC*AKTLQA Trigger: AGCTTGCAAAGTTTTAGCCAAACAACTTGTGCATCT...TAAGGTGAAATTGCCTTGGTATCTAATGAATGTGTAGACAGGGAGATAAAATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| CDS-3UTR CAA 90 bp | TCATTTTATCTCCCTGTCTACACATTCATTAGATACCAAGGCAATTTCACCTTATCCAGCCATCTTCATTaGGGAATTCATCACTTTTGT | + |
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Preference number: 5 (lower is better) Translates to: SFYLPVYTFIRYQGNFTLSSHLH*GIHHFC Trigger: ACAAAAGTGATGAATTCCCAAATGAAGATGGCTGGA...TAAGGTGAAATTGCCTTGGTATCTAATGAATGTGTAGACAGGGAGATAAAATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 |
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| CDS CAA 72 bp | GGAGGTCGGGGTCGCCAGGCAGGACCCGCGGAAGGCTaGTATCCGCAGCTACCGCAGCCGCGTCACCCGGAG | + |
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Preference number: 6 (lower is better) Translates to: GGRGRQAGPAEG*YPQLPQPRHPE Trigger: CTCCGGGTGACGCGGCTGCGGTAGCTGCGGATACAAGCCTTCCGCGGGTCCTGCCTGGCGACCCCGACCTCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000494980.5 ENST00000676705.1 ENST00000677929.1 ENST00000678859.1 |
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| CDS TCA 72 bp | CCGCAGCTACCGCAGCCGCGTCACCCGGAGCTCAGGTaGCCGGGAACTAACACACTTTTTGGAGAAGTCACT | + |
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Preference number: 6 (lower is better) Translates to: PQLPQPRHPELR*PGTNTLFGEVT Trigger: AGTGACTTCTCCAAAAAGTGTGTTAGTTCCCGGTCACCTGAGCTCCGGGTGACGCGGCTGCGGTAGCTGCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000471660.5 ENST00000677929.1 |
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| CDS TCA 72 bp | GGCAACAACAGCGAAACTCATCCACGGTTTTCTTCTTaGAGAGGGACGCCATGGTTAAAGACTGCGCCCGGG | + |
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Preference number: 6 (lower is better) Translates to: GNNSETHPRFSS*RGTPWLKTAPG Trigger: CCCGGGCGCAGTCTTTAACCATGGCGTCCCTCTTCAAGAAGAAAACCGTGGATGAGTTTCGCTGTTGTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000676705.1 ENST00000678859.1 |
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| CDS CAA 72 bp | GGGCAACAACAGCGAAACTCATCCACGGTTTTCTTCTaGAAGAGGGACGCCATGGTTAAAGACTGCGCCCGG | + |
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Preference number: 6 (lower is better) Translates to: GQQQRNSSTVFF*KRDAMVKDCAR Trigger: CCGGGCGCAGTCTTTAACCATGGCGTCCCTCTTCAAGAAGAAAACCGTGGATGAGTTTCGCTGTTGTTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000676705.1 ENST00000678859.1 |
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| CDS TCA 72 bp | ACAACAGCGAAACTCTGTCATCCACGGTTTTCTTCTTaGAGAGGGACGCCATGGTTAAAGACTGCGCCCGGG | + |
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Preference number: 6 (lower is better) Translates to: TTAKLCHPRFSS*RGTPWLKTAPG Trigger: CCCGGGCGCAGTCTTTAACCATGGCGTCCCTCTTCAAGAAGAAAACCGTGGATGACAGAGTTTCGCTGTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472024.3 |
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| CDS CAA 72 bp | AACAACAGCGAAACTCTGTCATCCACGGTTTTCTTCTaGAAGAGGGACGCCATGGTTAAAGACTGCGCCCGG | + |
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Preference number: 6 (lower is better) Translates to: NNSETLSSTVFF*KRDAMVKDCAR Trigger: CCGGGCGCAGTCTTTAACCATGGCGTCCCTCTTCAAGAAGAAAACCGTGGATGACAGAGTTTCGCTGTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472024.3 |
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| CDS CAA 72 bp | TTCTGTTCCTTTATTACATCATCCACGGTTTTCTTCTaGAAGAGGGACGCCATGGTTAAAGACTGCGCCCGG | + |
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Preference number: 6 (lower is better) Translates to: FCSFITSSTVFF*KRDAMVKDCAR Trigger: CCGGGCGCAGTCTTTAACCATGGCGTCCCTCTTCAAGAAGAAAACCGTGGATGATGTAATAAAGGAACAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000263780.9 ENST00000494980.5 ENST00000676947.1 ENST00000677929.1 |
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| CDS TCA 72 bp | CATCAGAACCGTCAAAGATGTCATCAAGTGTATCATTaGCTAGGGGATATGGGAGAAGGAGCAAAGCAGTTA | + |
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Preference number: 6 (lower is better) Translates to: HQNRQRCHQVYH*LGDMGEGAKQL Trigger: TAACTGCTTTGCTCCTTCTCCCATATCCCCTAGTCAATGATACACTTGATGACATCTTTGACGGTTCTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000466696.1 ENST00000677929.1 ENST00000678859.1 |
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| CDS CCA 72 bp | ACATCCAACTGGGAGGAAGTTACATGTGAAGTAATCTaGCAAGGATACGTAGGGTTTAACCACACAGAGATA | + |
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Preference number: 6 (lower is better) Translates to: TSNWEEVTCEVI*QGYVGFNHTEI Trigger: TATCTCTGTGTGGTTAAACCCTACGTATCCTTGCCAGATTACTTCACATGTAACTTCCTCCCAGTTGGATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000677929.1 ENST00000678859.1 |
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| CDS TCA 72 bp | GAAACACCAGACTTTCCAATGAGGCAGATCTGGATTTaGATCTCACCTCAGCCACTTGATCATCATGATTAT | + |
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Preference number: 6 (lower is better) Translates to: ETPDFPMRQIWI*ISPQPLDHHDY Trigger: ATAATCATGATGATCAAGTGGCTGAGGTGAGATTCAAATCCAGATCTGCCTCATTGGAAAGTCTGGTGTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678818.1 |
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| CDS CAA 90 bp | ACAGCAAAAGTTCTCGTCTTCTGTTTCCGTAGATGCACAAGTTGTTaGGCTAAAACTTTGCAAGCTTCCTTATTACCAATCTTGGCCATT | + |
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Preference number: 6 (lower is better) Translates to: TAKVLVFCFRRCTSC*AKTLQASLLPILAI Trigger: AATGGCCAAGATTGGTAATAAGGAAGCTTGCAAAGTTTTAGCCAAACAACTTGTGCATCTACGGAAACAGAAGACGAGAACTTTTGCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000676705.1 ENST00000676947.1 ENST00000677929.1 ENST00000678859.1 |
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| CDS CAA 90 bp | GTAGCAAAAGTTCTCGTCTTCTGTTTCCGTAGATGCACAAGTTGTTaGGCTAAAACTTTGCAAGCTTCCTTATTACCAATCTTGGCCATT | + |
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Preference number: 6 (lower is better) Translates to: VAKVLVFCFRRCTSC*AKTLQASLLPILAI Trigger: AATGGCCAAGATTGGTAATAAGGAAGCTTGCAAAGTTTTAGCCAAACAACTTGTGCATCTACGGAAACAGAAGACGAGAACTTTTGCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494980.5 |
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| CDS CAA 72 bp | GTTCTCGTCTTCTGTTTCCGTAGATGCACAAGTTGTTaGGCTAAAACTTTGCAAGCTTCCTTATTACCAATC | + |
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Preference number: 6 (lower is better) Translates to: VLVFCFRRCTSC*AKTLQASLLPI Trigger: GATTGGTAATAAGGAAGCTTGCAAAGTTTTAGCCAAACAACTTGTGCATCTACGGAAACAGAAGACGAGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000494980.5 ENST00000676705.1 ENST00000676947.1 ENST00000677929.1 ENST00000678859.1 |
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| CDS GCA 72 bp | GTTTCCGTAGATGCACAAGTTGTTTGGCTAAAACTTTaGAAGCTTCCTTATTACCAATCTTGGCCATTTTCT | + |
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Preference number: 6 (lower is better) Translates to: VSVDAQVVWLKL*KLPYYQSWPFS Trigger: AGAAAATGGCCAAGATTGGTAATAAGGAAGCTTGCAAAGTTTTAGCCAAACAACTTGTGCATCTACGGAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000494980.5 ENST00000676705.1 ENST00000676947.1 ENST00000677929.1 ENST00000678859.1 |
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| CDS CCA 72 bp | TTCTCGTCTTCTGTTTCCGTAGATGCACAAGTTGTTTaGCTAAAACTTTGCAAGCTTCCTTATTACCAATCT | + |
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Preference number: 6 (lower is better) Translates to: FSSSVSVDAQVV*LKLCKLPYYQS Trigger: AGATTGGTAATAAGGAAGCTTGCAAAGTTTTAGCCAAACAACTTGTGCATCTACGGAAACAGAAGACGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000494980.5 ENST00000676705.1 ENST00000676947.1 ENST00000677929.1 ENST00000678859.1 |
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| CDS CAA 72 bp | TGTTTCCGTAGATGCACAAGTTGTTTGGCTAAAACTTaGCAAGCTTCCTTATTACCAATCTTGGCCATTTTC | + |
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Preference number: 6 (lower is better) Translates to: CFRRCTSCLAKT*QASLLPILAIF Trigger: GAAAATGGCCAAGATTGGTAATAAGGAAGCTTGCAAAGTTTTAGCCAAACAACTTGTGCATCTACGGAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000494980.5 ENST00000676705.1 ENST00000676947.1 ENST00000677929.1 ENST00000678859.1 |
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| CDS CAA 90 bp | CTCGTCTTCTGTTTCCGTAGATGCACAAGTTGTTTGGCTAAAACTTaGCAAGCTTCCTTATTACCAATCTTGGCCATTTTCTTAATTTCT | + |
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Preference number: 6 (lower is better) Translates to: LVFCFRRCTSCLAKT*QASLLPILAIFLIS Trigger: AGAAATTAAGAAAATGGCCAAGATTGGTAATAAGGAAGCTTGCAAAGTTTTAGCCAAACAACTTGTGCATCTACGGAAACAGAAGACGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000263780.9 ENST00000471660.5 ENST00000472024.3 ENST00000494980.5 ENST00000676705.1 ENST00000676947.1 ENST00000677929.1 ENST00000678859.1 |
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| CDS CAA 90 bp | TTTGGCCATCTTTCCAGAAATTTCAATTCCAATTTCATCAAGAACTaGATTCACAATATCCTGGCTTTCTTCTTCGTCATCAGAACCGTC | + |
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Preference number: 6 (lower is better) Translates to: FGHLSRNFNSNFIKN*IHNILAFFFVIRTV Trigger: GACGGTTCTGATGACGAAGAAGAAAGCCAGGATATTGTGAATCAAGTTCTTGATGAAATTGGAATTGAAATTTCTGGAAAGATGGCCAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000263780.9 ENST00000466696.1 ENST00000471660.5 ENST00000472024.3 ENST00000494980.5 ENST00000676705.1 ENST00000677929.1 ENST00000678859.1 |
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| CDS CAA 72 bp | GGACACAAGCAAGAAGGAATAAGTTCTTCTGTTTGGTaGTTATTTAAGGTACATAAATGGCAAATGTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GHKQEGISSSVW*LFKVHKWQMSG Trigger: CCCAGACATTTGCCATTTATGTACCTTAAATAACAACCAAACAGAAGAACTTATTCCTTCTTGCTTGTGTCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000677929.1 ENST00000678859.1 |
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| CDS CAA 90 bp | CTCACTTACTTTTGCTGTAGTAGACATTGCTCCAGCCATCTTCATTaGGGAATTCATCACTTTTGTTTGTGTAGACATAGAAGTAACTTT | + |
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Preference number: 6 (lower is better) Translates to: LTYFCCSRHCSSHLH*GIHHFCLCRHRSNF Trigger: AAAGTTACTTCTATGTCTACACAAACAAAAGTGATGAATTCCCAAATGAAGATGGCTGGAGCAATGTCTACTACAGCAAAAGTAAGTGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000676947.1 |
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| CDS CAA 72 bp | TTGGCTAAAACTTTGCAAGCTTCCTTATTACCAATCTaGGCCATTTTCTTAATTTCTAATTCCATCCACGGT | + |
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Preference number: 6 (lower is better) Translates to: LAKTLQASLLPI*AIFLISNSIHG Trigger: ACCGTGGATGGAATTAGAAATTAAGAAAATGGCCAAGATTGGTAATAAGGAAGCTTGCAAAGTTTTAGCCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471660.5 |
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| CDS CAA 72 bp | CTTTCCAGAAATTTCAATTCCAATTTCATCAAGAACTaGATTCACAATATCCTGGCTTTCTTCTTCGTCATC | + |
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Preference number: 6 (lower is better) Translates to: LSRNFNSNFIKN*IHNILAFFFVI Trigger: GATGACGAAGAAGAAAGCCAGGATATTGTGAATCAAGTTCTTGATGAAATTGGAATTGAAATTTCTGGAAAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000263780.9 ENST00000466696.1 ENST00000471660.5 ENST00000472024.3 ENST00000494980.5 ENST00000676705.1 ENST00000677929.1 ENST00000678859.1 |
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