RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHM (Homo sapiens)

Ensembl gene IDs: ENSG00000188419

Ensembl transcript IDs: ENST00000357749.7, ENST00000467744.2, ENST00000487515.1, ENST00000615443.1

Found 213 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGATGTGTTCGGAGTTTCTTCCTTCTGGTGGGTTCGTGGTCTCGCTaGCTCAGGAGTGAAGCTGCAGACCTTCGCGGTGAATGTTACAGC +
Preference number: 1 (lower is better)
Translates to: RCVRSFFLLVGSWSR*LRSEAADLRGECYS
Trigger: GCTGTAACATTCACCGCGAAGGTCTGCAGCTTCACTCCTGAGCCAGCGAGACCACGAACCCACCAGAAGGAAGAAACTCCGAACACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
3UTR CCA 90 bp TCCTTGGTTCTTTCCATTTCCCATGAATCTGTGACCTGCCACAGCTaGCTTCCTTTAAGAACATCTCTGAAACCTGGTGAGGTCAGGGAC +
Preference number: 1 (lower is better)
Translates to: SLVLSISHESVTCHS*LPLRTSLKPGEVRD
Trigger: GTCCCTGACCTCACCAGGTTTCAGAGATGTTCTTAAAGGAAGCCAGCTGTGGCAGGTCACAGATTCATGGGAAATGGAAAGAACCAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR TCA 90 bp GACCTGCCACAGCTGGCTTCCTTTAAGAACATCTCTGAAACCTGGTaGGGTCAGGGACCAGCTGCAGTTGAAGTATGTAAGAACTATGTA +
Preference number: 1 (lower is better)
Translates to: DLPQLASFKNISETW*GQGPAAVEVCKNYV
Trigger: TACATAGTTCTTACATACTTCAACTGCAGCTGGTCCCTGACCTCACCAGGTTTCAGAGATGTTCTTAAAGGAAGCCAGCTGTGGCAGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR GCA 90 bp GAGCTATATTCCTTGGTTCTTTCCATTTCCCATGAATCTGTGACCTaGCACAGCTGGCTTCCTTTAAGAACATCTCTGAAACCTGGTGAG +
Preference number: 1 (lower is better)
Translates to: ELYSLVLSISHESVT*HSWLPLRTSLKPGE
Trigger: CTCACCAGGTTTCAGAGATGTTCTTAAAGGAAGCCAGCTGTGGCAGGTCACAGATTCATGGGAAATGGAAAGAACCAAGGAATATAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR TCA 90 bp AAAGGTGAGGCAAGAGCTATATTCCTTGGTTCTTTCCATTTCCCATaGATCTGTGACCTGCCACAGCTGGCTTCCTTTAAGAACATCTCT +
Preference number: 1 (lower is better)
Translates to: KGEARAIFLGSFHFP*ICDLPQLASFKNIS
Trigger: AGAGATGTTCTTAAAGGAAGCCAGCTGTGGCAGGTCACAGATTCATGGGAAATGGAAAGAACCAAGGAATATAGCTCTTGCCTCACCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR CCA 90 bp ATCAAATGTAAAATATTAGAATGCTATCGGTGTGTCCGGAATTGGTaGGTTCTTGGTCTCACTGACTTAAAGAATGAAGCCGCGGACCCG +
Preference number: 1 (lower is better)
Translates to: IKCKILECYRCVRNW*VLGLTDLKNEAADP
Trigger: CGGGTCCGCGGCTTCATTCTTTAAGTCAGTGAGACCAAGAACCCACCAATTCCGGACACACCGATAGCATTCTAATATTTTACATTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615443.1
3UTR CCA 90 bp GCAATCAAATGTAAAATATTAGAATGCTATCGGTGTGTCCGGAATTaGTGGGTTCTTGGTCTCACTGACTTAAAGAATGAAGCCGCGGAC +
Preference number: 1 (lower is better)
Translates to: AIKCKILECYRCVRN*WVLGLTDLKNEAAD
Trigger: GTCCGCGGCTTCATTCTTTAAGTCAGTGAGACCAAGAACCCACCAATTCCGGACACACCGATAGCATTCTAATATTTTACATTTGATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615443.1
3UTR TCA 90 bp TGCAGTAAGGCCAATAGAATTTTTGTGGTTATTCTAGGCCTACCCTaGTTGTCTGTTTACATGAATGTGCATGCTGCATTCAAGCGGCTT +
Preference number: 1 (lower is better)
Translates to: CSKANRIFVVILGLP*LSVYMNVHAAFKRL
Trigger: AAGCCGCTTGAATGCAGCATGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATTCTATTGGCCTTACTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR GCA 90 bp AATGGACCACAAACTATCTCCTCCATTGTTCTACATATAGGTGGCTaGAGTAAGGCCAATAGAATTTTTGTGGTTATTCTAGGCCTACCC +
Preference number: 1 (lower is better)
Translates to: NGPQTISSIVLHIGG*SKANRIFVVILGLP
Trigger: GGGTAGGCCTAGAATAACCACAAAAATTCTATTGGCCTTACTGCAGCCACCTATATGTAGAACAATGGAGGAGATAGTTTGTGGTCCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR TCA 90 bp CTGCTTTCTAACATTTCTCAAACAGTCCTTCTATCAAGTAGACTCTaGGACCAGTCAGAATTTCCAAAGTTGGGTATCCAGTTTGGTGTA +
Preference number: 1 (lower is better)
Translates to: LLSNISQTVLLSSRL*DQSEFPKLGIQFGV
Trigger: TACACCAAACTGGATACCCAACTTTGGAAATTCTGACTGGTCTCAGAGTCTACTTGATAGAAGGACTGTTTGAGAAATGTTAGAAAGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR TCA 90 bp CAGACTCAATCGTCTCATCTACTGGAACCTTTTATAATATATTGCTaGTATCCAGGGGCAAGGCCAATATCCGGTACATTAATAAGTATG +
Preference number: 1 (lower is better)
Translates to: QTQSSHLLEPFIIYC*YPGARPISGTLISM
Trigger: CATACTTATTAATGTACCGGATATTGGCCTTGCCCCTGGATATCAGCAATATATTATAAAAGGTTCCAGTAGATGAGACGATTGAGTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR GCA 90 bp TTAGGGCTTACCAACTGTCATACACAATTTGGAGTCCTTGGTGGTTaGAGGTTTACCTACCAGAAAAGGAATAAAACAATTTATAGAGTG +
Preference number: 1 (lower is better)
Translates to: LGLTNCHTQFGVLGG*RFTYQKRNKTIYRV
Trigger: CACTCTATAAATTGTTTTATTCCTTTTCTGGTAGGTAAACCTGCAACCACCAAGGACTCCAAATTGTGTATGACAGTTGGTAAGCCCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR TCA 90 bp GATTCTTCCCATAGCTTCCTAACACTGGGAGTTAGGCACTTTAATTTCTCATTACGGTGGGCGCAGGAGTaGAGCTGCAGATCTTCGCGG +
Preference number: 2 (lower is better)
Translates to: DSSHSFLTLGVRHFNFSLRWAQE*SCRSSR
Trigger: CCGCGAAGATCTGCAGCTTCACTCCTGCGCCCACCG...TAATGAGAAATTAAAGTGCCTAACTCCCAGTGTTAGGAAGCTATGGGAAGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
3UTR-3UTR GCA 90 bp CAAAGGCTACCAAGGCTGACAATCCAGGTAACTATGGCAGTGACAGAAGTCAATCACTGCAGCTTAGTTTaGTGCCTATGTACAGCCCCC +
Preference number: 2 (lower is better)
Translates to: QRLPRLTIQVTMAVTEVNHCSLV*CLCTAP
Trigger: GGGGGCTGTACATAGGCAGCAAACTAAGCTGCAGTG...ATTGACTTCTGTCACTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR CCA 90 bp AAGAAAGAAGAACTCTCACACACTGTTGGTAGGAATGCAAATCAGTACAGCCATCTTCTGGTGGGTTCGTaGTCTCGCTGGCTCAGGAGT +
Preference number: 2 (lower is better)
Translates to: KKEELSHTVGRNANQYSHLLVGS*SRWLRS
Trigger: ACTCCTGAGCCAGCGAGACCACGAACCCACCAGAAG...ATGGCTGTACTGATTTGCATTCCTACCAACAGTGTGTGAGAGTTCTTCTTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
3UTR-3UTR TCA 90 bp CAAAGGCTACCAAGGCTGACAATCCAGGTAACTATGGCAGTGACAGAAGTCAATTCTTTCCATTTCCCATaGATCTGTGACCTGCCACAG +
Preference number: 2 (lower is better)
Translates to: QRLPRLTIQVTMAVTEVNSFHFP*ICDLPQ
Trigger: CTGTGGCAGGTCACAGATTCATGGGAAATGGAAAGA...ATTGACTTCTGTCACTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR GCA 90 bp CAAAGGCTACCAAGGCTGACAATCCAGGTAACTATGGCAGTGACAGAAGTCAATGGAGTCCTTGGTGGTTaGAGGTTTACCTACCAGAAA +
Preference number: 2 (lower is better)
Translates to: QRLPRLTIQVTMAVTEVNGVLGG*RFTYQK
Trigger: TTTCTGGTAGGTAAACCTGCAACCACCAAGGACTCC...ATTGACTTCTGTCACTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR GCA 90 bp CAAAGGCTACCAAGGCTGACAATCCAGGTAACTATGGCAGTGACAGAAGTCAATTGCAGCTTAGTTTGCTaGCTATGTACAGCCCCCTTT +
Preference number: 2 (lower is better)
Translates to: QRLPRLTIQVTMAVTEVNCSLVC*LCTAPF
Trigger: AAAGGGGGCTGTACATAGGCAGCAAACTAAGCTGCA...ATTGACTTCTGTCACTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR CCA 90 bp AGGGGCAAGGCCAATATCCGGTACATTAATAAGTATGTATTAGACATTGAGTGCAGGGGACTAAAGAGATaGGGAGGGGCTGTACACTGG +
Preference number: 2 (lower is better)
Translates to: RGKANIRYINKYVLDIECRGLKR*GGAVHW
Trigger: CCAGTGTACAGCCCCTCCCCATCTCTTTAGTCCCCT...GCACTCAATGTCTAATACATACTTATTAATGTACCGGATATTGGCCTTGCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR CCA 90 bp CATGGTAAGAAAGAAGAACTCTCACACACTGTTGGTAGGAATGCAAATCAGTACGTTTCTTCCTTCTGGTaGGTTCGTGGTCTCGCTGGC +
Preference number: 2 (lower is better)
Translates to: HGKKEELSHTVGRNANQYVSSFW*VRGLAG
Trigger: GCCAGCGAGACCACGAACCCACCAGAAGGAAGAAAC...GTACTGATTTGCATTCCTACCAACAGTGTGTGAGAGTTCTTCTTTCTTACCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
3UTR-3UTR CCA 90 bp CAAAGGCTACCAAGGCTGACAATCCAGGTAACTATGGCAGTGACAGAAGTCAATATTTGGAGTCCTTGGTaGTTGCAGGTTTACCTACCA +
Preference number: 2 (lower is better)
Translates to: QRLPRLTIQVTMAVTEVNIWSPW*LQVYLP
Trigger: TGGTAGGTAAACCTGCAACCACCAAGGACTCCAAAT...ATTGACTTCTGTCACTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR CCA 90 bp AATTTTTGTGGTTATTCTAGGCCTACCCTGATTGTCTGTTTACATGAATGTGCAGGAGGGGCTGTACACTaGGAGGTAGGGATAGGAGCA +
Preference number: 2 (lower is better)
Translates to: NFCGYSRPTLIVCLHECAGGAVH*EVGIGA
Trigger: TGCTCCTATCCCTACCTCCCAGTGTACAGCCCCTCC...TGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR CCA 90 bp CATGGTAAGAAAGAAGAACTCTCACACACTGTTGGTAGGAATGCAAATCAGTACCGGTGTGTCCGGAATTaGTGGGTTCTTGGTCTCACT +
Preference number: 2 (lower is better)
Translates to: HGKKEELSHTVGRNANQYRCVRN*WVLGLT
Trigger: AGTGAGACCAAGAACCCACCAATTCCGGACACACCG...GTACTGATTTGCATTCCTACCAACAGTGTGTGAGAGTTCTTCTTTCTTACCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
3UTR CAA 90 bp AGGGACCAGCTGCAGTTGAAGTATGTAAGAACTATGTACTTTACATaGGAGCCATGGCTTCCTGACAGACAATATAGGCCAGATGTTGTG +
Preference number: 2 (lower is better)
Translates to: RDQLQLKYVRTMYFT*EPWLPDRQYRPDVV
Trigger: CACAACATCTGGCCTATATTGTCTGTCAGGAAGCCATGGCTCCAATGTAAAGTACATAGTTCTTACATACTTCAACTGCAGCTGGTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR TCA 90 bp AATTTTTGTGGTTATTCTAGGCCTACCCTGATTGTCTGTTTACATGAATGTGCAATCTCTGAAACCTGGTaGGGTCAGGGACCAGCTGCA +
Preference number: 2 (lower is better)
Translates to: NFCGYSRPTLIVCLHECAISETW*GQGPAA
Trigger: TGCAGCTGGTCCCTGACCTCACCAGGTTTCAGAGAT...TGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR CCA 90 bp CAAAGGCTACCAAGGCTGACAATCCAGGTAACTATGGCAGTGACAGAAGTCAATCTATGTACTTTACATTaGAGCCATGGCTTCCTGACA +
Preference number: 2 (lower is better)
Translates to: QRLPRLTIQVTMAVTEVNLCTLH*SHGFLT
Trigger: TGTCAGGAAGCCATGGCTCCAATGTAAAGTACATAG...ATTGACTTCTGTCACTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR CAA 90 bp TTAAGAACATCTCTGAAACCTGGTGAGGTCAGGGACCAGCTGCAGTaGAAGTATGTAAGAACTATGTACTTTACATTGGAGCCATGGCTT +
Preference number: 2 (lower is better)
Translates to: LRTSLKPGEVRDQLQ*KYVRTMYFTLEPWL
Trigger: AAGCCATGGCTCCAATGTAAAGTACATAGTTCTTACATACTTCAACTGCAGCTGGTCCCTGACCTCACCAGGTTTCAGAGATGTTCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR TCA 90 bp CAAAGGCTACCAAGGCTGACAATCCAGGTAACTATGGCAGTGACAGAAGTCAATATTCTAGGCCTACCCTaGTTGTCTGTTTACATGAAT +
Preference number: 2 (lower is better)
Translates to: QRLPRLTIQVTMAVTEVNILGLP*LSVYMN
Trigger: ATTCATGTAAACAGACAATCAGGGTAGGCCTAGAAT...ATTGACTTCTGTCACTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR GCA 90 bp CAAAGGCTACCAAGGCTGACAATCCAGGTAACTATGGCAGTGACAGAAGTCAATCTACATATAGGTGGCTaGAGTAAGGCCAATAGAATT +
Preference number: 2 (lower is better)
Translates to: QRLPRLTIQVTMAVTEVNLHIGG*SKANRI
Trigger: AATTCTATTGGCCTTACTGCAGCCACCTATATGTAG...ATTGACTTCTGTCACTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR TCA 90 bp AAATCGAATCCCTATGACAAAGTAGGTTATAATGTGATCCTACTGTCCCTGATTGGGATAGGAGCAGCCTaGGAGGCTAGTAAGTTAAGT +
Preference number: 2 (lower is better)
Translates to: KSNPYDKVGYNVILLSLIGIGAA*EASKLS
Trigger: ACTTAACTTACTAGCCTCTCAGGCTGCTCCTATCCC...AATCAGGGACAGTAGGATCACATTATAACCTACTTTGTCATAGGGATTCGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR GCA 90 bp AATTTTTGTGGTTATTCTAGGCCTACCCTGATTGTCTGTTTACATGAATGTGCAGACATTGAGTGCATATaGCCCAGCTGGGTTTCAGGA +
Preference number: 2 (lower is better)
Translates to: NFCGYSRPTLIVCLHECADIECI*PSWVSG
Trigger: TCCTGAAACCCAGCTGGGGCATATGCACTCAATGTC...TGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR CCA 90 bp ACTATGAAACTATTACATGGTAAGAAAGAAGAACTCTCACACACTGTTGGTAGGTGTGTCCGGAATTGGTaGGTTCTTGGTCTCACTGAC +
Preference number: 2 (lower is better)
Translates to: TMKLLHGKKEELSHTVGRCVRNW*VLGLTD
Trigger: GTCAGTGAGACCAAGAACCCACCAATTCCGGACACA...CCTACCAACAGTGTGTGAGAGTTCTTCTTTCTTACCATGTAATAGTTTCATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
3UTR-3UTR TCA 90 bp GATTCTTCCCATAGCTTCCTAACACTGGGAGTTAGGCACTTTAATTTCTCATTAGGAGTTTGTTCCTTCTaGTGTTCAGATGTGTTCGGA +
Preference number: 2 (lower is better)
Translates to: DSSHSFLTLGVRHFNFSLGVCSF*CSDVFG
Trigger: TCCGAACACATCTGAACATCAGAAGGAACAAACTCC...TAATGAGAAATTAAAGTGCCTAACTCCCAGTGTTAGGAAGCTATGGGAAGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
3UTR-3UTR TCA 90 bp AAGAAAGAAGAACTCTCACACACTGTTGGTAGGAATGCAAATCAGTACAGCCATAACGGTTGGTTCCCTTaGTGTGCATACATGTGTTTA +
Preference number: 2 (lower is better)
Translates to: KKEELSHTVGRNANQYSHNGWFP*CAYMCL
Trigger: TAAACACATGTATGCACATCAAGGGAACCAACCGTT...ATGGCTGTACTGATTTGCATTCCTACCAACAGTGTGTGAGAGTTCTTCTTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
3UTR-3UTR GCA 90 bp CAAAGGCTACCAAGGCTGACAATCCAGGTAACTATGGCAGTGACAGAAGTCAATATGAGCAAGTCAATGTaGTTTATAAGTGTTGTGTGT +
Preference number: 2 (lower is better)
Translates to: QRLPRLTIQVTMAVTEVNMSKSM*FISVVC
Trigger: ACACACAACACTTATAAAGCACATTGACTTGCTCAT...ATTGACTTCTGTCACTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR GCA 90 bp AGGGGCAAGGCCAATATCCGGTACATTAATAAGTATGTATTAGACATTGAGTGCTATAGGCAACATCACTaGAGCTTAGTTTGCTGCCTA +
Preference number: 2 (lower is better)
Translates to: RGKANIRYINKYVLDIECYRQHH*SLVCCL
Trigger: TAGGCAGCAAACTAAGCTGCAGTGATGTTGCCTATA...GCACTCAATGTCTAATACATACTTATTAATGTACCGGATATTGGCCTTGCCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR GCA 90 bp AATTTTTGTGGTTATTCTAGGCCTACCCTGATTGTCTGTTTACATGAATGTGCACATGAATCTGTGACCTaGCACAGCTGGCTTCCTTTA +
Preference number: 2 (lower is better)
Translates to: NFCGYSRPTLIVCLHECAHESVT*HSWLPL
Trigger: TAAAGGAAGCCAGCTGTGGCAGGTCACAGATTCATG...TGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR CCA 90 bp AATTTTTGTGGTTATTCTAGGCCTACCCTGATTGTCTGTTTACATGAATGTGCAGTGACCTGCCACAGCTaGCTTCCTTTAAGAACATCT +
Preference number: 2 (lower is better)
Translates to: NFCGYSRPTLIVCLHECAVTCHS*LPLRTS
Trigger: AGATGTTCTTAAAGGAAGCCAGCTGTGGCAGGTCAC...TGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR CCA 90 bp CAAAGGCTACCAAGGCTGACAATCCAGGTAACTATGGCAGTGACAGAAGTCAATGTGGCCATTTTACTATaGACAAATAAATATGGGAGA +
Preference number: 2 (lower is better)
Translates to: QRLPRLTIQVTMAVTEVNVAILL*TNKYGR
Trigger: TCTCCCATATTTATTTGTCCATAGTAAAATGGCCAC...ATTGACTTCTGTCACTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR TCA 90 bp CACAATTTACTGCAATTGTATTCAGACTCAATCGTCTCATCTACTGGAACCTTTTCCATTACTCTGGCTTaGACTATATCTGCAGTGGGT +
Preference number: 2 (lower is better)
Translates to: HNLLQLYSDSIVSSTGTFSITLA*TISAVG
Trigger: ACCCACTGCAGATATAGTTCAAGCCAGAGTAATGGA...AAAGGTTCCAGTAGATGAGACGATTGAGTCTGAATACAATTGCAGTAAATTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR TCA 90 bp AATTTTTGTGGTTATTCTAGGCCTACCCTGATTGTCTGTTTACATGAATGTGCAGTATGTATTAGACATTaGGTGCATATGCCCCAGCTG +
Preference number: 2 (lower is better)
Translates to: NFCGYSRPTLIVCLHECAVCIRH*VHMPQL
Trigger: CAGCTGGGGCATATGCACTCAATGTCTAATACATAC...TGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR TCA 90 bp ACTATGAAACTATTACATGGTAAGAAAGAAGAACTCTCACACACTGTTGGTAGGATGAAATCAGTAGGTTaGAGAGACATCTGCACTCCC +
Preference number: 2 (lower is better)
Translates to: TMKLLHGKKEELSHTVGRMKSVG*RDICTP
Trigger: GGGAGTGCAGATGTCTCTTCAACCTACTGATTTCAT...CCTACCAACAGTGTGTGAGAGTTCTTCTTTCTTACCATGTAATAGTTTCATAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
3UTR-3UTR CCA 90 bp CACAATTTACTGCAATTGTATTCAGACTCAATCGTCTCATCTACTGGAACCTTTCTGTCATACACAATTTaGAGTCCTTGGTGGTTGCAG +
Preference number: 2 (lower is better)
Translates to: HNLLQLYSDSIVSSTGTFLSYTI*SPWWLQ
Trigger: CTGCAACCACCAAGGACTCCAAATTGTGTATGACAG...AAAGGTTCCAGTAGATGAGACGATTGAGTCTGAATACAATTGCAGTAAATTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR GCA 90 bp AAGAAAGAAGAACTCTCACACACTGTTGGTAGGAATGCAAATCAGTACAGCCATACAGGTTACAGCAGTTaGCACAAAGATAATATCCAA +
Preference number: 2 (lower is better)
Translates to: KKEELSHTVGRNANQYSHTGYSS*HKDNIQ
Trigger: TTGGATATTATCTTTGTGGCAACTGCTGTAACCTGT...ATGGCTGTACTGATTTGCATTCCTACCAACAGTGTGTGAGAGTTCTTCTTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
3UTR-3UTR CCA 90 bp AGGGGCAAGGCCAATATCCGGTACATTAATAAGTATGTATTAGACATTGAGTGCCAGAATTTCCAAAGTTaGGTATCCAGTTTGGTGTAT +
Preference number: 2 (lower is better)
Translates to: RGKANIRYINKYVLDIECQNFQS*VSSLVY
Trigger: ATACACCAAACTGGATACCCAACTTTGGAAATTCTG...GCACTCAATGTCTAATACATACTTATTAATGTACCGGATATTGGCCTTGCCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR CCA 90 bp AAATCGAATCCCTATGACAAAGTAGGTTATAATGTGATCCTACTGTCCCTGATTACAATTTGGAGTCCTTaGTGGTTGCAGGTTTACCTA +
Preference number: 2 (lower is better)
Translates to: KSNPYDKVGYNVILLSLITIWSP*WLQVYL
Trigger: TAGGTAAACCTGCAACCACCAAGGACTCCAAATTGT...AATCAGGGACAGTAGGATCACATTATAACCTACTTTGTCATAGGGATTCGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR CCA 90 bp ACTATGAAACTATTACATGGTAAGAAAGAAGAACTCTCACACACTGTTGGTAGGCTTCACCCTCACTACTaGGTATATAGCCAAAGGAAA +
Preference number: 2 (lower is better)
Translates to: TMKLLHGKKEELSHTVGRLHPHY*VYSQRK
Trigger: TTTCCTTTGGCTATATACCCAGTAGTGAGGGTGAAG...CCTACCAACAGTGTGTGAGAGTTCTTCTTTCTTACCATGTAATAGTTTCATAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
3UTR-3UTR TCA 90 bp AATTTTTGTGGTTATTCTAGGCCTACCCTGATTGTCTGTTTACATGAATGTGCAATATTCAAATACCAATaGGCCTATCCACACCTTTCC +
Preference number: 2 (lower is better)
Translates to: NFCGYSRPTLIVCLHECAIFKYQ*AYPHLS
Trigger: GGAAAGGTGTGGATAGGCTCATTGGTATTTGAATAT...TGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR TCA 90 bp CACAATTTACTGCAATTGTATTCAGACTCAATCGTCTCATCTACTGGAACCTTTTGTTTGGAAGTTGACTaGCAGCAAGCAATTATTTCC +
Preference number: 2 (lower is better)
Translates to: HNLLQLYSDSIVSSTGTFCLEVD*QQAIIS
Trigger: GGAAATAATTGCTTGCTGTCAGTCAACTTCCAAACA...AAAGGTTCCAGTAGATGAGACGATTGAGTCTGAATACAATTGCAGTAAATTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR TCA 90 bp ACTATGAAACTATTACATGGTAAGAAAGAAGAACTCTCACACACTGTTGGTAGGATTGCCCAAATACTTTaGCGTATTTTCCAAGCAGTG +
Preference number: 2 (lower is better)
Translates to: TMKLLHGKKEELSHTVGRIAQIL*RIFQAV
Trigger: CACTGCTTGGAAAATACGTCAAAGTATTTGGGCAAT...CCTACCAACAGTGTGTGAGAGTTCTTCTTTCTTACCATGTAATAGTTTCATAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615443.1
3UTR-3UTR GCA 90 bp AAGAAAGAAGAACTCTCACACACTGTTGGTAGGAATGCAAATCAGTACAGCCATTGTAAAATATTAGAATaGTATCGGTGTGTCCGGAAT +
Preference number: 2 (lower is better)
Translates to: KKEELSHTVGRNANQYSHCKILE*YRCVRN
Trigger: ATTCCGGACACACCGATAGCATTCTAATATTTTACA...ATGGCTGTACTGATTTGCATTCCTACCAACAGTGTGTGAGAGTTCTTCTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615443.1
3UTR-3UTR CCA 90 bp AAATCGAATCCCTATGACAAAGTAGGTTATAATGTGATCCTACTGTCCCTGATTTTTACATTGGAGCCATaGCTTCCTGACAGACAATAT +
Preference number: 2 (lower is better)
Translates to: KSNPYDKVGYNVILLSLIFTLEP*LPDRQY
Trigger: ATATTGTCTGTCAGGAAGCCATGGCTCCAATGTAAA...AATCAGGGACAGTAGGATCACATTATAACCTACTTTGTCATAGGGATTCGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR CCA 90 bp AATTTTTGTGGTTATTCTAGGCCTACCCTGATTGTCTGTTTACATGAATGTGCAGTTCTTCCATTACTCTaGCTTGAACTATATCTGCAG +
Preference number: 2 (lower is better)
Translates to: NFCGYSRPTLIVCLHECAVLPLL*LELYLQ
Trigger: CTGCAGATATAGTTCAAGCCAGAGTAATGGAAGAAC...TGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR CCA 90 bp AAGAAAGAAGAACTCTCACACACTGTTGGTAGGAATGCAAATCAGTACAGCCATACAACTAAAGAATATTaGATTCTTCCCATAGCTTCC +
Preference number: 2 (lower is better)
Translates to: KKEELSHTVGRNANQYSHTTKEY*ILPIAS
Trigger: GGAAGCTATGGGAAGAATCCAATATTCTTTAGTTGT...ATGGCTGTACTGATTTGCATTCCTACCAACAGTGTGTGAGAGTTCTTCTTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
3UTR-3UTR CCA 90 bp CATGGTAAGAAAGAAGAACTCTCACACACTGTTGGTAGGAATGCAAATCAGTACCCATGGCATATAAACTaGTCTCAACAACTAAAGAAT +
Preference number: 2 (lower is better)
Translates to: HGKKEELSHTVGRNANQYPWHIN*SQQLKN
Trigger: ATTCTTTAGTTGTTGAGACCAGTTTATATGCCATGG...GTACTGATTTGCATTCCTACCAACAGTGTGTGAGAGTTCTTCTTTCTTACCATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
3UTR-3UTR CCA 90 bp ACTATGAAACTATTACATGGTAAGAAAGAAGAACTCTCACACACTGTTGGTAGGCACTCCCATGTTTATTaGAGCACTATTCACAATTGC +
Preference number: 2 (lower is better)
Translates to: TMKLLHGKKEELSHTVGRHSHVY*STIHNC
Trigger: GCAATTGTGAATAGTGCTCCAATAAACATGGGAGTG...CCTACCAACAGTGTGTGAGAGTTCTTCTTTCTTACCATGTAATAGTTTCATAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
3UTR CAA 90 bp TTGACGTATTTTCCAAGCAGTGGTAATGGGTTTGCACTAATCCATTaGAATTCTCGCCTAGTCCTCCTTGCAATCAAATGTAAAATATTA +
Preference number: 2 (lower is better)
Translates to: LTYFPSSGNGFALIH*NSRLVLLAIKCKIL
Trigger: TAATATTTTACATTTGATTGCAAGGAGGACTAGGCGAGAATTCAAATGGATTAGTGCAAACCCATTACCACTGCTTGGAAAATACGTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615443.1
3UTR-3UTR TCA 90 bp CACAATTTACTGCAATTGTATTCAGACTCAATCGTCTCATCTACTGGAACCTTTACCAAAGAAAATACATaGGCTGGTTCTGAAAATGTG +
Preference number: 2 (lower is better)
Translates to: HNLLQLYSDSIVSSTGTFTKENT*AGSENV
Trigger: CACATTTTCAGAACCAGCTCATGTATTTTCTTTGGT...AAAGGTTCCAGTAGATGAGACGATTGAGTCTGAATACAATTGCAGTAAATTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR TCA 90 bp ACTATGAAACTATTACATGGTAAGAAAGAAGAACTCTCACACACTGTTGGTAGGGTTCTTTACAGTCTATaGTGTTTGAACCTAGCCTAT +
Preference number: 2 (lower is better)
Translates to: TMKLLHGKKEELSHTVGRVLYSL*CLNLAY
Trigger: ATAGGCTAGGTTCAAACATCATAGACTGTAAAGAAC...CCTACCAACAGTGTGTGAGAGTTCTTCTTTCTTACCATGTAATAGTTTCATAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
3UTR-3UTR GCA 90 bp GATTCTTCCCATAGCTTCCTAACACTGGGAGTTAGGCACTTTAATTTCTCATTAGTCTTTAGCCTGTTTTaGAATACCCAACGTATTAAA +
Preference number: 2 (lower is better)
Translates to: DSSHSFLTLGVRHFNFSLVFSLF*NTQRIK
Trigger: TTTAATACGTTGGGTATTGCAAAACAGGCTAAAGAC...TAATGAGAAATTAAAGTGCCTAACTCCCAGTGTTAGGAAGCTATGGGAAGAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615443.1
3UTR-3UTR CCA 90 bp AATTTTTGTGGTTATTCTAGGCCTACCCTGATTGTCTGTTTACATGAATGTGCAGTGATCTATTTTGTTTaGAAGTTGACTGACAGCAAG +
Preference number: 2 (lower is better)
Translates to: NFCGYSRPTLIVCLHECAVIYFV*KLTDSK
Trigger: CTTGCTGTCAGTCAACTTCCAAACAAAATAGATCAC...TGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR GCA 90 bp AAATCGAATCCCTATGACAAAGTAGGTTATAATGTGATCCTACTGTCCCTGATTTTGCCTTATAATTGCTaGTGCTTTCTAACATTTCTC +
Preference number: 2 (lower is better)
Translates to: KSNPYDKVGYNVILLSLILPYNC*CFLTFL
Trigger: GAGAAATGTTAGAAAGCAGCAGCAATTATAAGGCAA...AATCAGGGACAGTAGGATCACATTATAACCTACTTTGTCATAGGGATTCGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR CCA 90 bp AAATCGAATCCCTATGACAAAGTAGGTTATAATGTGATCCTACTGTCCCTGATTTTTCCACTTTATATATaGAGAAACGTAGGCTCAGAA +
Preference number: 2 (lower is better)
Translates to: KSNPYDKVGYNVILLSLIFPLYI*RNVGSE
Trigger: TTCTGAGCCTACGTTTCTCCATATATAAAGTGGAAA...AATCAGGGACAGTAGGATCACATTATAACCTACTTTGTCATAGGGATTCGATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR CCA 72 bp CGGAGTTTCTTCCTTCTGGTGGGTTCGTGGTCTCGCTaGCTCAGGAGTGAAGCTGCAGACCTTCGCGGTGAA +
Preference number: 3 (lower is better)
Translates to: RSFFLLVGSWSR*LRSEAADLRGE
Trigger: TTCACCGCGAAGGTCTGCAGCTTCACTCCTGAGCCAGCGAGACCACGAACCCACCAGAAGGAAGAAACTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
3UTR TCA 72 bp GGGGCTGTACACTGGGAGGTAGGGATAGGAGCAGCCTaGGAGGCTAGTAAGTTAAGTTCTTCCATTACTCTG +
Preference number: 3 (lower is better)
Translates to: GAVHWEVGIGAA*EASKLSSSITL
Trigger: CAGAGTAATGGAAGAACTTAACTTACTAGCCTCTCAGGCTGCTCCTATCCCTACCTCCCAGTGTACAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR CAA 90 bp CAAAGGCTACCAAGGCTGACAATCCAGGTAACTATGGCAGTGACAGAAGTCAATTCACTGCAGCTTAGTTaGCTGCCTATGTACAGCCCC +
Preference number: 3 (lower is better)
Translates to: QRLPRLTIQVTMAVTEVNSLQLS*LPMYSP
Trigger: GGGGCTGTACATAGGCAGCAAACTAAGCTGCAGTGA...ATTGACTTCTGTCACTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR TCA 72 bp CAGCTGGCTTCCTTTAAGAACATCTCTGAAACCTGGTaGGGTCAGGGACCAGCTGCAGTTGAAGTATGTAAG +
Preference number: 3 (lower is better)
Translates to: QLASFKNISETW*GQGPAAVEVCK
Trigger: CTTACATACTTCAACTGCAGCTGGTCCCTGACCTCACCAGGTTTCAGAGATGTTCTTAAAGGAAGCCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR CAA 90 bp CATGGTAAGAAAGAAGAACTCTCACACACTGTTGGTAGGAATGCAAATCAGTACTCGGTGTGTCCGGAATaGGTGGGTTCTTGGTCTCAC +
Preference number: 3 (lower is better)
Translates to: HGKKEELSHTVGRNANQYSVCPE*VGSWSH
Trigger: GTGAGACCAAGAACCCACCAATTCCGGACACACCGA...GTACTGATTTGCATTCCTACCAACAGTGTGTGAGAGTTCTTCTTTCTTACCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
3UTR CCA 72 bp CTTTCCATTTCCCATGAATCTGTGACCTGCCACAGCTaGCTTCCTTTAAGAACATCTCTGAAACCTGGTGAG +
Preference number: 3 (lower is better)
Translates to: LSISHESVTCHS*LPLRTSLKPGE
Trigger: CTCACCAGGTTTCAGAGATGTTCTTAAAGGAAGCCAGCTGTGGCAGGTCACAGATTCATGGGAAATGGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR CAA 90 bp CAAAGGCTACCAAGGCTGACAATCCAGGTAACTATGGCAGTGACAGAAGTCAATTCCTGCGTGAGACTTTaGAGATTCATCAAGTCAATG +
Preference number: 3 (lower is better)
Translates to: QRLPRLTIQVTMAVTEVNSCVRL*RFIKSM
Trigger: CATTGACTTGATGAATCTCAAAAGTCTCACGCAGGA...ATTGACTTCTGTCACTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR CAA 90 bp CAAAGGCTACCAAGGCTGACAATCCAGGTAACTATGGCAGTGACAGAAGTCAATTCAGAATTTCCAAAGTaGGGTATCCAGTTTGGTGTA +
Preference number: 3 (lower is better)
Translates to: QRLPRLTIQVTMAVTEVNSEFPK*GIQFGV
Trigger: TACACCAAACTGGATACCCAACTTTGGAAATTCTGA...ATTGACTTCTGTCACTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR CAA 90 bp CAAAGGCTACCAAGGCTGACAATCCAGGTAACTATGGCAGTGACAGAAGTCAATTGGGAGATAGGGAACTaGTTACTCCATTTTCCTATA +
Preference number: 3 (lower is better)
Translates to: QRLPRLTIQVTMAVTEVNWEIGN*LLHFPI
Trigger: TATAGGAAAATGGAGTAACAAGTTCCCTATCTCCCA...ATTGACTTCTGTCACTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR CCA 72 bp GTGTATATTAGGGCTTACCAACTGTCATACACAATTTaGAGTCCTTGGTGGTTGCAGGTTTACCTACCAGAA +
Preference number: 3 (lower is better)
Translates to: VYIRAYQLSYTI*SPWWLQVYLPE
Trigger: TTCTGGTAGGTAAACCTGCAACCACCAAGGACTCCAAATTGTGTATGACAGTTGGTAAGCCCTAATATACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR CAA 90 bp AATTTTTGTGGTTATTCTAGGCCTACCCTGATTGTCTGTTTACATGAATGTGCATGGAGTCCTTGGTGGTaGCAGGTTTACCTACCAGAA +
Preference number: 3 (lower is better)
Translates to: NFCGYSRPTLIVCLHECAWSPWW*QVYLPE
Trigger: TTCTGGTAGGTAAACCTGCAACCACCAAGGACTCCA...TGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR CCA 72 bp AAAATATTAGAATGCTATCGGTGTGTCCGGAATTGGTaGGTTCTTGGTCTCACTGACTTAAAGAATGAAGCC +
Preference number: 3 (lower is better)
Translates to: KILECYRCVRNW*VLGLTDLKNEA
Trigger: GGCTTCATTCTTTAAGTCAGTGAGACCAAGAACCCACCAATTCCGGACACACCGATAGCATTCTAATATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615443.1
3UTR-3UTR CAA 90 bp AAATCGAATCCCTATGACAAAGTAGGTTATAATGTGATCCTACTGTCCCTGATTCACAATTTGGAGTCCTaGGTGGTTGCAGGTTTACCT +
Preference number: 3 (lower is better)
Translates to: KSNPYDKVGYNVILLSLIHNLES*VVAGLP
Trigger: AGGTAAACCTGCAACCACCAAGGACTCCAAATTGTG...AATCAGGGACAGTAGGATCACATTATAACCTACTTTGTCATAGGGATTCGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR CAA 90 bp GATTCTTCCCATAGCTTCCTAACACTGGGAGTTAGGCACTTTAATTTCTCATTAGAACGGTTGGTTCCCTaGATGTGCATACATGTGTTT +
Preference number: 3 (lower is better)
Translates to: DSSHSFLTLGVRHFNFSLERLVP*MCIHVF
Trigger: AAACACATGTATGCACATCAAGGGAACCAACCGTTC...TAATGAGAAATTAAAGTGCCTAACTCCCAGTGTTAGGAAGCTATGGGAAGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
3UTR-3UTR CAA 90 bp AAGAAAGAAGAACTCTCACACACTGTTGGTAGGAATGCAAATCAGTACAGCCATAAATACTTAATTCACTaGGTGGAACGGTTGGTTCCC +
Preference number: 3 (lower is better)
Translates to: KKEELSHTVGRNANQYSHKYLIH*VERLVP
Trigger: GGGAACCAACCGTTCCACCAAGTGAATTAAGTATTT...ATGGCTGTACTGATTTGCATTCCTACCAACAGTGTGTGAGAGTTCTTCTTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
3UTR-3UTR CAA 90 bp AAATCGAATCCCTATGACAAAGTAGGTTATAATGTGATCCTACTGTCCCTGATTACTGTCATACACAATTaGGAGTCCTTGGTGGTTGCA +
Preference number: 3 (lower is better)
Translates to: KSNPYDKVGYNVILLSLITVIHN*ESLVVA
Trigger: TGCAACCACCAAGGACTCCAAATTGTGTATGACAGT...AATCAGGGACAGTAGGATCACATTATAACCTACTTTGTCATAGGGATTCGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR CAA 90 bp CACAATTTACTGCAATTGTATTCAGACTCAATCGTCTCATCTACTGGAACCTTTACTATGTACTTTACATaGGAGCCATGGCTTCCTGAC +
Preference number: 3 (lower is better)
Translates to: HNLLQLYSDSIVSSTGTFTMYFT*EPWLPD
Trigger: GTCAGGAAGCCATGGCTCCAATGTAAAGTACATAGT...AAAGGTTCCAGTAGATGAGACGATTGAGTCTGAATACAATTGCAGTAAATTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR CAA 90 bp AATTTTTGTGGTTATTCTAGGCCTACCCTGATTGTCTGTTTACATGAATGTGCAAGGGACCAGCTGCAGTaGAAGTATGTAAGAACTATG +
Preference number: 3 (lower is better)
Translates to: NFCGYSRPTLIVCLHECARDQLQ*KYVRTM
Trigger: CATAGTTCTTACATACTTCAACTGCAGCTGGTCCCT...TGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR CAA 90 bp AGGGGCAAGGCCAATATCCGGTACATTAATAAGTATGTATTAGACATTGAGTGCCAAGAGCTATATTCCTaGGTTCTTTCCATTTCCCAT +
Preference number: 3 (lower is better)
Translates to: RGKANIRYINKYVLDIECQELYS*VLSISH
Trigger: ATGGGAAATGGAAAGAACCAAGGAATATAGCTCTTG...GCACTCAATGTCTAATACATACTTATTAATGTACCGGATATTGGCCTTGCCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR CAA 90 bp CACAATTTACTGCAATTGTATTCAGACTCAATCGTCTCATCTACTGGAACCTTTTTCCATTACTCTGGCTaGAACTATATCTGCAGTGGG +
Preference number: 3 (lower is better)
Translates to: HNLLQLYSDSIVSSTGTFFHYSG*NYICSG
Trigger: CCCACTGCAGATATAGTTCAAGCCAGAGTAATGGAA...AAAGGTTCCAGTAGATGAGACGATTGAGTCTGAATACAATTGCAGTAAATTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR TCA 72 bp AACATTTCTCAAACAGTCCTTCTATCAAGTAGACTCTaGGACCAGTCAGAATTTCCAAAGTTGGGTATCCAG +
Preference number: 3 (lower is better)
Translates to: NISQTVLLSSRL*DQSEFPKLGIQ
Trigger: CTGGATACCCAACTTTGGAAATTCTGACTGGTCTCAGAGTCTACTTGATAGAAGGACTGTTTGAGAAATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR TCA 72 bp GCCAATAGAATTTTTGTGGTTATTCTAGGCCTACCCTaGTTGTCTGTTTACATGAATGTGCATGCTGCATTC +
Preference number: 3 (lower is better)
Translates to: ANRIFVVILGLP*LSVYMNVHAAF
Trigger: GAATGCAGCATGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATTCTATTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR GCA 72 bp ATCCGGTACATTAATAAGTATGTATTAGACATTGAGTaGATATGCCCCAGCTGGGTTTCAGGAAACATGATT +
Preference number: 3 (lower is better)
Translates to: IRYINKYVLDIE*ICPSWVSGNMI
Trigger: AATCATGTTTCCTGAAACCCAGCTGGGGCATATGCACTCAATGTCTAATACATACTTATTAATGTACCGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR CCA 72 bp TGTAAAATATTAGAATGCTATCGGTGTGTCCGGAATTaGTGGGTTCTTGGTCTCACTGACTTAAAGAATGAA +
Preference number: 3 (lower is better)
Translates to: CKILECYRCVRN*WVLGLTDLKNE
Trigger: TTCATTCTTTAAGTCAGTGAGACCAAGAACCCACCAATTCCGGACACACCGATAGCATTCTAATATTTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615443.1
3UTR CCA 72 bp AGTAGGTTGAAGAGACATCTGCACTCCCATGTTTATTaGAGCACTATTCACAATTGCGAAAATATGGAATCA +
Preference number: 3 (lower is better)
Translates to: SRLKRHLHSHVY*STIHNCENMES
Trigger: TGATTCCATATTTTCGCAATTGTGAATAGTGCTCCAATAAACATGGGAGTGCAGATGTCTCTTCAACCTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615443.1
3UTR GCA 72 bp CAAACTATCTCCTCCATTGTTCTACATATAGGTGGCTaGAGTAAGGCCAATAGAATTTTTGTGGTTATTCTA +
Preference number: 3 (lower is better)
Translates to: QTISSIVLHIGG*SKANRIFVVIL
Trigger: TAGAATAACCACAAAAATTCTATTGGCCTTACTGCAGCCACCTATATGTAGAACAATGGAGGAGATAGTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR-3UTR CAA 90 bp CACAATTTACTGCAATTGTATTCAGACTCAATCGTCTCATCTACTGGAACCTTTGCTAGTCACACAAGTTaGGTATTTAAAATGAGCAAG +
Preference number: 3 (lower is better)
Translates to: HNLLQLYSDSIVSSTGTFASHTS*VFKMSK
Trigger: CTTGCTCATTTTAAATACCAAACTTGTGTGACTAGC...AAAGGTTCCAGTAGATGAGACGATTGAGTCTGAATACAATTGCAGTAAATTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CCA 90 bp CAAAGGCTACCAAGGCTGACAATCCAGGTAACTATGGCAGTGACAGAAGTCAATAGGGGACTAAAGAGATaGGGAGGGGCTGTACACTGG +
Preference number: 4 (lower is better)
Translates to: QRLPRLTIQVTMAVTEVNRGLKR*GGAVHW
Trigger: CCAGTGTACAGCCCCTCCCCATCTCTTTAGTCCCCT...ATTGACTTCTGTCACTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR TCA 90 bp CAAAGGCTACCAAGGCTGACAATCCAGGTAACTATGGCAGTGACAGAAGTCAATGAGTATCCGCCATCTTaGCGGGAAACGTGTCATGTG +
Preference number: 4 (lower is better)
Translates to: QRLPRLTIQVTMAVTEVNEYPPS*RETCHV
Trigger: CACATGACACGTTTCCCGTCAAGATGGCGGATACTC...ATTGACTTCTGTCACTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR GCA 90 bp CAAAGGCTACCAAGGCTGACAATCCAGGTAACTATGGCAGTGACAGAAGTCAATGACCATCTATGGTGCTaGTGGCTGTCTCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: QRLPRLTIQVTMAVTEVNDHLWC*WLSLMS
Trigger: TGACATCAGAGACAGCCAGCAGCACCATAGATGGTC...ATTGACTTCTGTCACTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CCA 90 bp AAGAAAGAAGAACTCTCACACACTGTTGGTAGGAATGCAAATCAGTACAGCCATGTGGTTACCAGAGACTaGGGAGAACAGGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: KKEELSHTVGRNANQYSHVVTRD*GEQEGG
Trigger: CCCTCCCTCCTGTTCTCCCCAGTCTCTGGTAACCAC...ATGGCTGTACTGATTTGCATTCCTACCAACAGTGTGTGAGAGTTCTTCTTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
CDS-3UTR TCA 90 bp CAAAGGCTACCAAGGCTGACAATCCAGGTAACTATGGCAGTGACAGAAGTCAATCCTGTATTGCACACGTaGGCACATGTTCTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: QRLPRLTIQVTMAVTEVNPVLHT*AHVLRK
Trigger: TTTCCTGAGAACATGTGCTCACGTGTGCAATACAGG...ATTGACTTCTGTCACTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CCA 90 bp CAAAGGCTACCAAGGCTGACAATCCAGGTAACTATGGCAGTGACAGAAGTCAATCTGGTCTTGCCACACTaGACTGTCACTTACAATGTC +
Preference number: 4 (lower is better)
Translates to: QRLPRLTIQVTMAVTEVNLVLPH*TVTYNV
Trigger: GACATTGTAAGTGACAGTCCAGTGTGGCAAGACCAG...ATTGACTTCTGTCACTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CCA 90 bp CAAAGGCTACCAAGGCTGACAATCCAGGTAACTATGGCAGTGACAGAAGTCAATGTCTTCAGGATTTGGTaGAGGGGGACAGAAATCTTC +
Preference number: 4 (lower is better)
Translates to: QRLPRLTIQVTMAVTEVNVFRIW*RGTEIF
Trigger: GAAGATTTCTGTCCCCCTCCACCAAATCCTGAAGAC...ATTGACTTCTGTCACTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR TCA 90 bp CAAAGGCTACCAAGGCTGACAATCCAGGTAACTATGGCAGTGACAGAAGTCAATTACCGCCCAAGACAGTaGAGAAAGTTTTTGGTAGCT +
Preference number: 4 (lower is better)
Translates to: QRLPRLTIQVTMAVTEVNYRPRQ*RKFLVA
Trigger: AGCTACCAAAAACTTTCTTCACTGTCTTGGGCGGTA...ATTGACTTCTGTCACTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR GCA 90 bp AGGGGCAAGGCCAATATCCGGTACATTAATAAGTATGTATTAGACATTGAGTGCACTGCCCTGGAGATCTaGCTGTATTGCACACGTGAG +
Preference number: 4 (lower is better)
Translates to: RGKANIRYINKYVLDIECTALEI*LYCTRE
Trigger: CTCACGTGTGCAATACAGGCAGATCTCCAGGGCAGT...GCACTCAATGTCTAATACATACTTATTAATGTACCGGATATTGGCCTTGCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CCA 90 bp CAAAGGCTACCAAGGCTGACAATCCAGGTAACTATGGCAGTGACAGAAGTCAATCTGTCATACACAATTTaGAGTCCTTGGTGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: QRLPRLTIQVTMAVTEVNLSYTI*SPWWLQ
Trigger: CTGCAACCACCAAGGACTCCAAATTGTGTATGACAG...ATTGACTTCTGTCACTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR GCA 90 bp CAAAGGCTACCAAGGCTGACAATCCAGGTAACTATGGCAGTGACAGAAGTCAATTATAGGCAACATCACTaGAGCTTAGTTTGCTGCCTA +
Preference number: 4 (lower is better)
Translates to: QRLPRLTIQVTMAVTEVNYRQHH*SLVCCL
Trigger: TAGGCAGCAAACTAAGCTGCAGTGATGTTGCCTATA...ATTGACTTCTGTCACTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR CAA 72 bp TCTCTGAAACCTGGTGAGGTCAGGGACCAGCTGCAGTaGAAGTATGTAAGAACTATGTACTTTACATTGGAG +
Preference number: 4 (lower is better)
Translates to: SLKPGEVRDQLQ*KYVRTMYFTLE
Trigger: CTCCAATGTAAAGTACATAGTTCTTACATACTTCAACTGCAGCTGGTCCCTGACCTCACCAGGTTTCAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR GCA 90 bp AGGGGCAAGGCCAATATCCGGTACATTAATAAGTATGTATTAGACATTGAGTGCTCAAGGATCTGGTCTTaGCACACTGGACTGTCACTT +
Preference number: 4 (lower is better)
Translates to: RGKANIRYINKYVLDIECSRIWS*HTGLSL
Trigger: AAGTGACAGTCCAGTGTGGCAAGACCAGATCCTTGA...GCACTCAATGTCTAATACATACTTATTAATGTACCGGATATTGGCCTTGCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR GCA 90 bp CATGGTAAGAAAGAAGAACTCTCACACACTGTTGGTAGGAATGCAAATCAGTACTCAAGGATCTGGTCTTaGCACACTGGACTGTCACTT +
Preference number: 4 (lower is better)
Translates to: HGKKEELSHTVGRNANQYSRIWS*HTGLSL
Trigger: AAGTGACAGTCCAGTGTGGCAAGACCAGATCCTTGA...GTACTGATTTGCATTCCTACCAACAGTGTGTGAGAGTTCTTCTTTCTTACCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
CDS-3UTR GCA 90 bp AGGGGCAAGGCCAATATCCGGTACATTAATAAGTATGTATTAGACATTGAGTGCGGAGTCCTTGGTGGTTaGAGGTTTACCTACCAGAAA +
Preference number: 4 (lower is better)
Translates to: RGKANIRYINKYVLDIECGVLGG*RFTYQK
Trigger: TTTCTGGTAGGTAAACCTGCAACCACCAAGGACTCC...GCACTCAATGTCTAATACATACTTATTAATGTACCGGATATTGGCCTTGCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR GCA 90 bp AAATCGAATCCCTATGACAAAGTAGGTTATAATGTGATCCTACTGTCCCTGATTCACTGCAGCTTAGTTTaGTGCCTATGTACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: KSNPYDKVGYNVILLSLIHCSLV*CLCTAP
Trigger: GGGGGCTGTACATAGGCAGCAAACTAAGCTGCAGTG...AATCAGGGACAGTAGGATCACATTATAACCTACTTTGTCATAGGGATTCGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR GCA 90 bp AGGGGCAAGGCCAATATCCGGTACATTAATAAGTATGTATTAGACATTGAGTGCCATGAATCTGTGACCTaGCACAGCTGGCTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: RGKANIRYINKYVLDIECHESVT*HSWLPL
Trigger: TAAAGGAAGCCAGCTGTGGCAGGTCACAGATTCATG...GCACTCAATGTCTAATACATACTTATTAATGTACCGGATATTGGCCTTGCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CCA 90 bp CATGGTAAGAAAGAAGAACTCTCACACACTGTTGGTAGGAATGCAAATCAGTACCTGGTCTTGCCACACTaGACTGTCACTTACAATGTC +
Preference number: 4 (lower is better)
Translates to: HGKKEELSHTVGRNANQYLVLPH*TVTYNV
Trigger: GACATTGTAAGTGACAGTCCAGTGTGGCAAGACCAG...GTACTGATTTGCATTCCTACCAACAGTGTGTGAGAGTTCTTCTTTCTTACCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
CDS-3UTR CCA 90 bp CAAAGGCTACCAAGGCTGACAATCCAGGTAACTATGGCAGTGACAGAAGTCAATTTTACATTGGAGCCATaGCTTCCTGACAGACAATAT +
Preference number: 4 (lower is better)
Translates to: QRLPRLTIQVTMAVTEVNFTLEP*LPDRQY
Trigger: ATATTGTCTGTCAGGAAGCCATGGCTCCAATGTAAA...ATTGACTTCTGTCACTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CCA 90 bp AGGGGCAAGGCCAATATCCGGTACATTAATAAGTATGTATTAGACATTGAGTGCGTGACCTGCCACAGCTaGCTTCCTTTAAGAACATCT +
Preference number: 4 (lower is better)
Translates to: RGKANIRYINKYVLDIECVTCHS*LPLRTS
Trigger: AGATGTTCTTAAAGGAAGCCAGCTGTGGCAGGTCAC...GCACTCAATGTCTAATACATACTTATTAATGTACCGGATATTGGCCTTGCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CCA 90 bp ACTATGAAACTATTACATGGTAAGAAAGAAGAACTCTCACACACTGTTGGTAGGCGGTGTGTCCGGAATTaGTGGGTTCTTGGTCTCACT +
Preference number: 4 (lower is better)
Translates to: TMKLLHGKKEELSHTVGRRCVRN*WVLGLT
Trigger: AGTGAGACCAAGAACCCACCAATTCCGGACACACCG...CCTACCAACAGTGTGTGAGAGTTCTTCTTTCTTACCATGTAATAGTTTCATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
CDS-3UTR TCA 90 bp AGGGGCAAGGCCAATATCCGGTACATTAATAAGTATGTATTAGACATTGAGTGCTATAACAGCTCCTGCTaGTGTCTGACGAATCTCTCA +
Preference number: 4 (lower is better)
Translates to: RGKANIRYINKYVLDIECYNSSC*CLTNLS
Trigger: TGAGAGATTCGTCAGACATCAGCAGGAGCTGTTATA...GCACTCAATGTCTAATACATACTTATTAATGTACCGGATATTGGCCTTGCCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR TCA 90 bp CAAAGGCTACCAAGGCTGACAATCCAGGTAACTATGGCAGTGACAGAAGTCAATACCAAAGAAAATACATaGGCTGGTTCTGAAAATGTG +
Preference number: 4 (lower is better)
Translates to: QRLPRLTIQVTMAVTEVNTKENT*AGSENV
Trigger: CACATTTTCAGAACCAGCTCATGTATTTTCTTTGGT...ATTGACTTCTGTCACTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR TCA 90 bp AATTTTTGTGGTTATTCTAGGCCTACCCTGATTGTCTGTTTACATGAATGTGCAGGGATAGGAGCAGCCTaGGAGGCTAGTAAGTTAAGT +
Preference number: 4 (lower is better)
Translates to: NFCGYSRPTLIVCLHECAGIGAA*EASKLS
Trigger: ACTTAACTTACTAGCCTCTCAGGCTGCTCCTATCCC...TGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR GCA 90 bp CAAAGGCTACCAAGGCTGACAATCCAGGTAACTATGGCAGTGACAGAAGTCAATTCGTCCTTCTCGAAATaGAAGAATCCTGGTAATATT +
Preference number: 4 (lower is better)
Translates to: QRLPRLTIQVTMAVTEVNSSFSK*KNPGNI
Trigger: AATATTACCAGGATTCTTGCATTTCGAGAAGGACGA...ATTGACTTCTGTCACTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR GCA 90 bp CACAATTTACTGCAATTGTATTCAGACTCAATCGTCTCATCTACTGGAACCTTTACACAGCACACATCCTaGAGAAACACTGGGGGAGTT +
Preference number: 4 (lower is better)
Translates to: HNLLQLYSDSIVSSTGTFTQHTS*RNTGGV
Trigger: AACTCCCCCAGTGTTTCTGCAGGATGTGTGCTGTGT...AAAGGTTCCAGTAGATGAGACGATTGAGTCTGAATACAATTGCAGTAAATTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR GCA 90 bp AAATCGAATCCCTATGACAAAGTAGGTTATAATGTGATCCTACTGTCCCTGATTGACATTGAGTGCATATaGCCCAGCTGGGTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: KSNPYDKVGYNVILLSLIDIECI*PSWVSG
Trigger: TCCTGAAACCCAGCTGGGGCATATGCACTCAATGTC...AATCAGGGACAGTAGGATCACATTATAACCTACTTTGTCATAGGGATTCGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CCA 90 bp CAAAGGCTACCAAGGCTGACAATCCAGGTAACTATGGCAGTGACAGAAGTCAATCTGGCACTGTCAAAATaGAAATCTGTTGATCTGAAT +
Preference number: 4 (lower is better)
Translates to: QRLPRLTIQVTMAVTEVNLALSK*KSVDLN
Trigger: ATTCAGATCAACAGATTTCCATTTTGACAGTGCCAG...ATTGACTTCTGTCACTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CCA 90 bp CAAAGGCTACCAAGGCTGACAATCCAGGTAACTATGGCAGTGACAGAAGTCAATCAGAATTTCCAAAGTTaGGTATCCAGTTTGGTGTAT +
Preference number: 4 (lower is better)
Translates to: QRLPRLTIQVTMAVTEVNQNFQS*VSSLVY
Trigger: ATACACCAAACTGGATACCCAACTTTGGAAATTCTG...ATTGACTTCTGTCACTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR CAA 72 bp CTGCAGTTGAAGTATGTAAGAACTATGTACTTTACATaGGAGCCATGGCTTCCTGACAGACAATATAGGCCA +
Preference number: 4 (lower is better)
Translates to: LQLKYVRTMYFT*EPWLPDRQYRP
Trigger: TGGCCTATATTGTCTGTCAGGAAGCCATGGCTCCAATGTAAAGTACATAGTTCTTACATACTTCAACTGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR TCA 90 bp CACAATTTACTGCAATTGTATTCAGACTCAATCGTCTCATCTACTGGAACCTTTTCTTTCCATTTCCCATaGATCTGTGACCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: HNLLQLYSDSIVSSTGTFSFHFP*ICDLPQ
Trigger: CTGTGGCAGGTCACAGATTCATGGGAAATGGAAAGA...AAAGGTTCCAGTAGATGAGACGATTGAGTCTGAATACAATTGCAGTAAATTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR TCA 90 bp CATGGTAAGAAAGAAGAACTCTCACACACTGTTGGTAGGAATGCAAATCAGTACAACGGTTGGTTCCCTTaGTGTGCATACATGTGTTTA +
Preference number: 4 (lower is better)
Translates to: HGKKEELSHTVGRNANQYNGWFP*CAYMCL
Trigger: TAAACACATGTATGCACATCAAGGGAACCAACCGTT...GTACTGATTTGCATTCCTACCAACAGTGTGTGAGAGTTCTTCTTTCTTACCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
CDS-3UTR TCA 90 bp GATTCTTCCCATAGCTTCCTAACACTGGGAGTTAGGCACTTTAATTTCTCATTAATGAAATCAGTAGGTTaGAGAGACATCTGCACTCCC +
Preference number: 4 (lower is better)
Translates to: DSSHSFLTLGVRHFNFSLMKSVG*RDICTP
Trigger: GGGAGTGCAGATGTCTCTTCAACCTACTGATTTCAT...TAATGAGAAATTAAAGTGCCTAACTCCCAGTGTTAGGAAGCTATGGGAAGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
CDS-3UTR GCA 90 bp CACAATTTACTGCAATTGTATTCAGACTCAATCGTCTCATCTACTGGAACCTTTGAGATCTGCCTGTATTaGACACGTGAGCACATGTTC +
Preference number: 4 (lower is better)
Translates to: HNLLQLYSDSIVSSTGTFEICLY*TREHMF
Trigger: GAACATGTGCTCACGTGTGCAATACAGGCAGATCTC...AAAGGTTCCAGTAGATGAGACGATTGAGTCTGAATACAATTGCAGTAAATTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR GCA 90 bp CACAATTTACTGCAATTGTATTCAGACTCAATCGTCTCATCTACTGGAACCTTTTGCAGCTTAGTTTGCTaGCTATGTACAGCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: HNLLQLYSDSIVSSTGTFCSLVC*LCTAPF
Trigger: AAAGGGGGCTGTACATAGGCAGCAAACTAAGCTGCA...AAAGGTTCCAGTAGATGAGACGATTGAGTCTGAATACAATTGCAGTAAATTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CCA 90 bp AAGAAAGAAGAACTCTCACACACTGTTGGTAGGAATGCAAATCAGTACAGCCATATGTCACTGTTTTCCTaGTATTCCTTTAGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: KKEELSHTVGRNANQYSHMSLFS*YSFSQD
Trigger: GTCCTGGCTAAAGGAATACCAGGAAAACAGTGACAT...ATGGCTGTACTGATTTGCATTCCTACCAACAGTGTGTGAGAGTTCTTCTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615443.1
CDS-3UTR CCA 90 bp AATTTTTGTGGTTATTCTAGGCCTACCCTGATTGTCTGTTTACATGAATGTGCACTCTGGATCGCTGCTTaGAGTTTGTTCTGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: NFCGYSRPTLIVCLHECALWIAA*SLFCEH
Trigger: ATGCTCACAGAACAAACTCCAAGCAGCGATCCAGAG...TGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CCA 90 bp AATTTTTGTGGTTATTCTAGGCCTACCCTGATTGTCTGTTTACATGAATGTGCAAACAGCAAAAGTTCCTaGTTCCTCTGCTGGCACTGT +
Preference number: 4 (lower is better)
Translates to: NFCGYSRPTLIVCLHECANSKSS*FLCWHC
Trigger: ACAGTGCCAGCAGAGGAACCAGGAACTTTTGCTGTT...TGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CCA 90 bp CAAAGGCTACCAAGGCTGACAATCCAGGTAACTATGGCAGTGACAGAAGTCAATTTTCCACTTTATATATaGAGAAACGTAGGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: QRLPRLTIQVTMAVTEVNFPLYI*RNVGSE
Trigger: TTCTGAGCCTACGTTTCTCCATATATAAAGTGGAAA...ATTGACTTCTGTCACTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CCA 90 bp CATGGTAAGAAAGAAGAACTCTCACACACTGTTGGTAGGAATGCAAATCAGTACAAAGCAGCGTGGACCTaGCATAACAAAATACTTCCA +
Preference number: 4 (lower is better)
Translates to: HGKKEELSHTVGRNANQYKAAWT*HNKILP
Trigger: TGGAAGTATTTTGTTATGCCAGGTCCACGCTGCTTT...GTACTGATTTGCATTCCTACCAACAGTGTGTGAGAGTTCTTCTTTCTTACCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615443.1
CDS-3UTR CCA 90 bp AAGAAAGAAGAACTCTCACACACTGTTGGTAGGAATGCAAATCAGTACAGCCATCTTCACCCTCACTACTaGGTATATAGCCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: KKEELSHTVGRNANQYSHLHPHY*VYSQRK
Trigger: TTTCCTTTGGCTATATACCCAGTAGTGAGGGTGAAG...ATGGCTGTACTGATTTGCATTCCTACCAACAGTGTGTGAGAGTTCTTCTTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
CDS-3UTR TCA 90 bp CATGGTAAGAAAGAAGAACTCTCACACACTGTTGGTAGGAATGCAAATCAGTACTCCATAGTAGCTTCTTaGATCAACATGCAGAACTCT +
Preference number: 4 (lower is better)
Translates to: HGKKEELSHTVGRNANQYSIVAS*INMQNS
Trigger: AGAGTTCTGCATGTTGATTCAAGAAGCTACTATGGA...GTACTGATTTGCATTCCTACCAACAGTGTGTGAGAGTTCTTCTTTCTTACCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
CDS-3UTR TCA 90 bp AATTTTTGTGGTTATTCTAGGCCTACCCTGATTGTCTGTTTACATGAATGTGCAGCTCCTGCTGATGTCTaGCGAATCTCTCATATTGAA +
Preference number: 4 (lower is better)
Translates to: NFCGYSRPTLIVCLHECAAPADV*RISHIE
Trigger: TTCAATATGAGAGATTCGTCAGACATCAGCAGGAGC...TGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR TCA 90 bp AAATCGAATCCCTATGACAAAGTAGGTTATAATGTGATCCTACTGTCCCTGATTTCCATTACTCTGGCTTaGACTATATCTGCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: KSNPYDKVGYNVILLSLISITLA*TISAVG
Trigger: ACCCACTGCAGATATAGTTCAAGCCAGAGTAATGGA...AATCAGGGACAGTAGGATCACATTATAACCTACTTTGTCATAGGGATTCGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR TCA 90 bp AAATCGAATCCCTATGACAAAGTAGGTTATAATGTGATCCTACTGTCCCTGATTGTATGTATTAGACATTaGGTGCATATGCCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: KSNPYDKVGYNVILLSLIVCIRH*VHMPQL
Trigger: CAGCTGGGGCATATGCACTCAATGTCTAATACATAC...AATCAGGGACAGTAGGATCACATTATAACCTACTTTGTCATAGGGATTCGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR TCA 90 bp AGGGGCAAGGCCAATATCCGGTACATTAATAAGTATGTATTAGACATTGAGTGCTTTATAATATATTGCTaGTATCCAGGGGCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: RGKANIRYINKYVLDIECFIIYC*YPGARP
Trigger: TGGCCTTGCCCCTGGATATCAGCAATATATTATAAA...GCACTCAATGTCTAATACATACTTATTAATGTACCGGATATTGGCCTTGCCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR TCA 90 bp AGGGGCAAGGCCAATATCCGGTACATTAATAAGTATGTATTAGACATTGAGTGCGATTGTCTGTTTACATaGATGTGCATGCTGCATTCA +
Preference number: 4 (lower is better)
Translates to: RGKANIRYINKYVLDIECDCLFT*MCMLHS
Trigger: TGAATGCAGCATGCACATTCATGTAAACAGACAATC...GCACTCAATGTCTAATACATACTTATTAATGTACCGGATATTGGCCTTGCCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR TCA 90 bp AAATCGAATCCCTATGACAAAGTAGGTTATAATGTGATCCTACTGTCCCTGATTCAGTATATGTTTTTCTaGGCAGGCACACCAACTAGG +
Preference number: 4 (lower is better)
Translates to: KSNPYDKVGYNVILLSLIQYMFF*AGTPTR
Trigger: CCTAGTTGGTGTGCCTGCTCAGAAAAACATATACTG...AATCAGGGACAGTAGGATCACATTATAACCTACTTTGTCATAGGGATTCGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR TCA 90 bp CATGGTAAGAAAGAAGAACTCTCACACACTGTTGGTAGGAATGCAAATCAGTACATTGCCCAAATACTTTaGCGTATTTTCCAAGCAGTG +
Preference number: 4 (lower is better)
Translates to: HGKKEELSHTVGRNANQYIAQIL*RIFQAV
Trigger: CACTGCTTGGAAAATACGTCAAAGTATTTGGGCAAT...GTACTGATTTGCATTCCTACCAACAGTGTGTGAGAGTTCTTCTTTCTTACCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615443.1
CDS-3UTR GCA 90 bp AGGGGCAAGGCCAATATCCGGTACATTAATAAGTATGTATTAGACATTGAGTGCCTCTGTGGTATCTTCTaGTATAGGCACATTTTCACT +
Preference number: 4 (lower is better)
Translates to: RGKANIRYINKYVLDIECLCGIF*YRHIFT
Trigger: AGTGAAAATGTGCCTATAGCAGAAGATACCACAGAG...GCACTCAATGTCTAATACATACTTATTAATGTACCGGATATTGGCCTTGCCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR GCA 90 bp CACAATTTACTGCAATTGTATTCAGACTCAATCGTCTCATCTACTGGAACCTTTACAAAAATGGAGTGTTaGCATACCGCCCAAGACAGT +
Preference number: 4 (lower is better)
Translates to: HNLLQLYSDSIVSSTGTFTKMEC*HTAQDS
Trigger: ACTGTCTTGGGCGGTATGGCAACACTCCATTTTTGT...AAAGGTTCCAGTAGATGAGACGATTGAGTCTGAATACAATTGCAGTAAATTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR GCA 90 bp AGGGGCAAGGCCAATATCCGGTACATTAATAAGTATGTATTAGACATTGAGTGCAATAGGTGCCTTTCATaGATGTCATCGTTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: RGKANIRYINKYVLDIECNRCLS*MSSLKN
Trigger: GTTCTTCAACGATGACATGCATGAAAGGCACCTATT...GCACTCAATGTCTAATACATACTTATTAATGTACCGGATATTGGCCTTGCCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR GCA 90 bp AATTTTTGTGGTTATTCTAGGCCTACCCTGATTGTCTGTTTACATGAATGTGCAGTATTAGACATTGAGTaGATATGCCCCAGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: NFCGYSRPTLIVCLHECAVLDIE*ICPSWV
Trigger: AACCCAGCTGGGGCATATGCACTCAATGTCTAATAC...TGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CCA 90 bp AAATCGAATCCCTATGACAAAGTAGGTTATAATGTGATCCTACTGTCCCTGATTATTTGGAGTCCTTGGTaGTTGCAGGTTTACCTACCA +
Preference number: 4 (lower is better)
Translates to: KSNPYDKVGYNVILLSLIIWSPW*LQVYLP
Trigger: TGGTAGGTAAACCTGCAACCACCAAGGACTCCAAAT...AATCAGGGACAGTAGGATCACATTATAACCTACTTTGTCATAGGGATTCGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CCA 90 bp AAATCGAATCCCTATGACAAAGTAGGTTATAATGTGATCCTACTGTCCCTGATTTGCATATGCCCCAGCTaGGTTTCAGGAAACATGATT +
Preference number: 4 (lower is better)
Translates to: KSNPYDKVGYNVILLSLICICPS*VSGNMI
Trigger: AATCATGTTTCCTGAAACCCAGCTGGGGCATATGCA...AATCAGGGACAGTAGGATCACATTATAACCTACTTTGTCATAGGGATTCGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CCA 90 bp AAGAAAGAAGAACTCTCACACACTGTTGGTAGGAATGCAAATCAGTACAGCCATCACTCCCATGTTTATTaGAGCACTATTCACAATTGC +
Preference number: 4 (lower is better)
Translates to: KKEELSHTVGRNANQYSHHSHVY*STIHNC
Trigger: GCAATTGTGAATAGTGCTCCAATAAACATGGGAGTG...ATGGCTGTACTGATTTGCATTCCTACCAACAGTGTGTGAGAGTTCTTCTTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
CDS-3UTR TCA 90 bp AGGGGCAAGGCCAATATCCGGTACATTAATAAGTATGTATTAGACATTGAGTGCAATACTTCCACATGTTaGATAGTTTTGTCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: RGKANIRYINKYVLDIECNTSTC*IVLSFL
Trigger: CAGGAAGGACAAAACTATTCAACATGTGGAAGTATT...GCACTCAATGTCTAATACATACTTATTAATGTACCGGATATTGGCCTTGCCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR TCA 90 bp CATGGTAAGAAAGAAGAACTCTCACACACTGTTGGTAGGAATGCAAATCAGTACAATACTTCCACATGTTaGATAGTTTTGTCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: HGKKEELSHTVGRNANQYNTSTC*IVLSFL
Trigger: CAGGAAGGACAAAACTATTCAACATGTGGAAGTATT...GTACTGATTTGCATTCCTACCAACAGTGTGTGAGAGTTCTTCTTTCTTACCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615443.1
CDS-3UTR CCA 90 bp CACAATTTACTGCAATTGTATTCAGACTCAATCGTCTCATCTACTGGAACCTTTATGTCACTGTTTTCCTaGTATTCCTTTAGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: HNLLQLYSDSIVSSTGTFMSLFS*YSFSQD
Trigger: GTCCTGGCTAAAGGAATACCAGGAAAACAGTGACAT...AAAGGTTCCAGTAGATGAGACGATTGAGTCTGAATACAATTGCAGTAAATTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CCA 90 bp AAATCGAATCCCTATGACAAAGTAGGTTATAATGTGATCCTACTGTCCCTGATTTGGGGGAGTTCTCCTTaGCCATATAAAGGAAACAAA +
Preference number: 4 (lower is better)
Translates to: KSNPYDKVGYNVILLSLIWGSSP*PYKGNK
Trigger: TTTGTTTCCTTTATATGGCCAAGGAGAACTCCCCCA...AATCAGGGACAGTAGGATCACATTATAACCTACTTTGTCATAGGGATTCGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CCA 90 bp AGGGGCAAGGCCAATATCCGGTACATTAATAAGTATGTATTAGACATTGAGTGCGTGATCTATTTTGTTTaGAAGTTGACTGACAGCAAG +
Preference number: 4 (lower is better)
Translates to: RGKANIRYINKYVLDIECVIYFV*KLTDSK
Trigger: CTTGCTGTCAGTCAACTTCCAAACAAAATAGATCAC...GCACTCAATGTCTAATACATACTTATTAATGTACCGGATATTGGCCTTGCCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CCA 90 bp AATTTTTGTGGTTATTCTAGGCCTACCCTGATTGTCTGTTTACATGAATGTGCACTATGTACTTTACATTaGAGCCATGGCTTCCTGACA +
Preference number: 4 (lower is better)
Translates to: NFCGYSRPTLIVCLHECALCTLH*SHGFLT
Trigger: TGTCAGGAAGCCATGGCTCCAATGTAAAGTACATAG...TGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CCA 90 bp CATGGTAAGAAAGAAGAACTCTCACACACTGTTGGTAGGAATGCAAATCAGTACTCAGTACAGCCATTATaGAAAACAGTACAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: HGKKEELSHTVGRNANQYSVQPL*KTVQKF
Trigger: GAACTTCTGTACTGTTTTCCATAATGGCTGTACTGA...GTACTGATTTGCATTCCTACCAACAGTGTGTGAGAGTTCTTCTTTCTTACCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615443.1
CDS-3UTR TCA 90 bp AAATCGAATCCCTATGACAAAGTAGGTTATAATGTGATCCTACTGTCCCTGATTTCCATAGTAGCTTCTTaGATCAACATGCAGAACTCT +
Preference number: 4 (lower is better)
Translates to: KSNPYDKVGYNVILLSLISIVAS*INMQNS
Trigger: AGAGTTCTGCATGTTGATTCAAGAAGCTACTATGGA...AATCAGGGACAGTAGGATCACATTATAACCTACTTTGTCATAGGGATTCGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR TCA 90 bp AATTTTTGTGGTTATTCTAGGCCTACCCTGATTGTCTGTTTACATGAATGTGCAAAGAACATAACTCAATaGCCCGAACAGCAAAAGTTC +
Preference number: 4 (lower is better)
Translates to: NFCGYSRPTLIVCLHECAKNITQ*PEQQKF
Trigger: GAACTTTTGCTGTTCGGGTCATTGAGTTATGTTCTT...TGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR TCA 90 bp AAATCGAATCCCTATGACAAAGTAGGTTATAATGTGATCCTACTGTCCCTGATTGTGTTTCAGCCTGTTTaGCTGCATTATCATTTCCTA +
Preference number: 4 (lower is better)
Translates to: KSNPYDKVGYNVILLSLIVFQPV*LHYHFL
Trigger: TAGGAAATGATAATGCAGTCAAACAGGCTGAAACAC...AATCAGGGACAGTAGGATCACATTATAACCTACTTTGTCATAGGGATTCGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR TCA 90 bp CACAATTTACTGCAATTGTATTCAGACTCAATCGTCTCATCTACTGGAACCTTTATATTCAAATACCAATaGGCCTATCCACACCTTTCC +
Preference number: 4 (lower is better)
Translates to: HNLLQLYSDSIVSSTGTFIFKYQ*AYPHLS
Trigger: GGAAAGGTGTGGATAGGCTCATTGGTATTTGAATAT...AAAGGTTCCAGTAGATGAGACGATTGAGTCTGAATACAATTGCAGTAAATTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR TCA 90 bp AAATCGAATCCCTATGACAAAGTAGGTTATAATGTGATCCTACTGTCCCTGATTTGTTTGGAAGTTGACTaGCAGCAAGCAATTATTTCC +
Preference number: 4 (lower is better)
Translates to: KSNPYDKVGYNVILLSLICLEVD*QQAIIS
Trigger: GGAAATAATTGCTTGCTGTCAGTCAACTTCCAAACA...AATCAGGGACAGTAGGATCACATTATAACCTACTTTGTCATAGGGATTCGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR TCA 90 bp CACAATTTACTGCAATTGTATTCAGACTCAATCGTCTCATCTACTGGAACCTTTATTCTAGGCCTACCCTaGTTGTCTGTTTACATGAAT +
Preference number: 4 (lower is better)
Translates to: HNLLQLYSDSIVSSTGTFILGLP*LSVYMN
Trigger: ATTCATGTAAACAGACAATCAGGGTAGGCCTAGAAT...AAAGGTTCCAGTAGATGAGACGATTGAGTCTGAATACAATTGCAGTAAATTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR GCA 90 bp AATTTTTGTGGTTATTCTAGGCCTACCCTGATTGTCTGTTTACATGAATGTGCACTGTTTTTCTTTGGTTaGTCTGTGGTATCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: NFCGYSRPTLIVCLHECALFFFG*SVVSSA
Trigger: AGCAGAAGATACCACAGAGCAACCAAAGAAAAACAG...TGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR GCA 90 bp AATTTTTGTGGTTATTCTAGGCCTACCCTGATTGTCTGTTTACATGAATGTGCAAATGAACCAAATAGGTaGCTTTCATGCATGTCATCG +
Preference number: 4 (lower is better)
Translates to: NFCGYSRPTLIVCLHECANEPNR*LSCMSS
Trigger: CGATGACATGCATGAAAGGCACCTATTTGGTTCATT...TGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR GCA 90 bp CACAATTTACTGCAATTGTATTCAGACTCAATCGTCTCATCTACTGGAACCTTTTTACATGAATGTGCATaGTGCATTCAAGCGGCTTTA +
Preference number: 4 (lower is better)
Translates to: HNLLQLYSDSIVSSTGTFLHECA*CIQAAL
Trigger: TAAAGCCGCTTGAATGCAGCATGCACATTCATGTAA...AAAGGTTCCAGTAGATGAGACGATTGAGTCTGAATACAATTGCAGTAAATTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR GCA 90 bp AATTTTTGTGGTTATTCTAGGCCTACCCTGATTGTCTGTTTACATGAATGTGCACTACATATAGGTGGCTaGAGTAAGGCCAATAGAATT +
Preference number: 4 (lower is better)
Translates to: NFCGYSRPTLIVCLHECALHIGG*SKANRI
Trigger: AATTCTATTGGCCTTACTGCAGCCACCTATATGTAG...TGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR GCA 90 bp AAGAAAGAAGAACTCTCACACACTGTTGGTAGGAATGCAAATCAGTACAGCCATGTCTTTAGCCTGTTTTaGAATACCCAACGTATTAAA +
Preference number: 4 (lower is better)
Translates to: KKEELSHTVGRNANQYSHVFSLF*NTQRIK
Trigger: TTTAATACGTTGGGTATTGCAAAACAGGCTAAAGAC...ATGGCTGTACTGATTTGCATTCCTACCAACAGTGTGTGAGAGTTCTTCTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615443.1
CDS-3UTR CCA 90 bp AAATCGAATCCCTATGACAAAGTAGGTTATAATGTGATCCTACTGTCCCTGATTGACAGAAATCTTCATTaGGGCAGATTTCCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: KSNPYDKVGYNVILLSLIDRNLH*GRFPGK
Trigger: TTTTCCAGGAAATCTGCCCCAATGAAGATTTCTGTC...AATCAGGGACAGTAGGATCACATTATAACCTACTTTGTCATAGGGATTCGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR CAA 72 bp CAATTTTCTTCTGGCAAACCGATTCTAAACATGGCATaGCATTGTCTTCATAACCATTCTCATATAGTAGGC +
Preference number: 4 (lower is better)
Translates to: QFSSGKPILNMA*HCLHNHSHIVG
Trigger: GCCTACTATATGAGAATGGTTATGAAGACAATGCAATGCCATGTTTAGAATCGGTTTGCCAGAAGAAAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR TCA 90 bp CACAATTTACTGCAATTGTATTCAGACTCAATCGTCTCATCTACTGGAACCTTTTTGCAATTGAATGCATaGCAATATATTGGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: HNLLQLYSDSIVSSTGTFLQLNA*QYIGGW
Trigger: CCAACCTCCAATATATTGTCATGCATTCAATTGCAA...AAAGGTTCCAGTAGATGAGACGATTGAGTCTGAATACAATTGCAGTAAATTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR GCA 90 bp ACTATGAAACTATTACATGGTAAGAAAGAAGAACTCTCACACACTGTTGGTAGGACAGGTTACAGCAGTTaGCACAAAGATAATATCCAA +
Preference number: 4 (lower is better)
Translates to: TMKLLHGKKEELSHTVGRTGYSS*HKDNIQ
Trigger: TTGGATATTATCTTTGTGGCAACTGCTGTAACCTGT...CCTACCAACAGTGTGTGAGAGTTCTTCTTTCTTACCATGTAATAGTTTCATAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
CDS-3UTR CCA 90 bp CACAATTTACTGCAATTGTATTCAGACTCAATCGTCTCATCTACTGGAACCTTTAGCCCACAGAATTCTTaGCTTTTCTACTTGTTCATT +
Preference number: 4 (lower is better)
Translates to: HNLLQLYSDSIVSSTGTFSPQNS*LFYLFI
Trigger: AATGAACAAGTAGAAAAGCCAAGAATTCTGTGGGCT...AAAGGTTCCAGTAGATGAGACGATTGAGTCTGAATACAATTGCAGTAAATTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CCA 90 bp AAATCGAATCCCTATGACAAAGTAGGTTATAATGTGATCCTACTGTCCCTGATTGTTGGGTATCCAGTTTaGTGTATATCCATTATTCAG +
Preference number: 4 (lower is better)
Translates to: KSNPYDKVGYNVILLSLIVGYPV*CISIIQ
Trigger: CTGAATAATGGATATACACCAAACTGGATACCCAAC...AATCAGGGACAGTAGGATCACATTATAACCTACTTTGTCATAGGGATTCGATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CCA 90 bp GATTCTTCCCATAGCTTCCTAACACTGGGAGTTAGGCACTTTAATTTCTCATTAACAACTAAAGAATATTaGATTCTTCCCATAGCTTCC +
Preference number: 4 (lower is better)
Translates to: DSSHSFLTLGVRHFNFSLTTKEY*ILPIAS
Trigger: GGAAGCTATGGGAAGAATCCAATATTCTTTAGTTGT...TAATGAGAAATTAAAGTGCCTAACTCCCAGTGTTAGGAAGCTATGGGAAGAATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
CDS-3UTR CCA 90 bp GATTCTTCCCATAGCTTCCTAACACTGGGAGTTAGGCACTTTAATTTCTCATTACCATGGCATATAAACTaGTCTCAACAACTAAAGAAT +
Preference number: 4 (lower is better)
Translates to: DSSHSFLTLGVRHFNFSLPWHIN*SQQLKN
Trigger: ATTCTTTAGTTGTTGAGACCAGTTTATATGCCATGG...TAATGAGAAATTAAAGTGCCTAACTCCCAGTGTTAGGAAGCTATGGGAAGAATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
CDS-3UTR GCA 90 bp CACAATTTACTGCAATTGTATTCAGACTCAATCGTCTCATCTACTGGAACCTTTTTGCCTTATAATTGCTaGTGCTTTCTAACATTTCTC +
Preference number: 4 (lower is better)
Translates to: HNLLQLYSDSIVSSTGTFLPYNC*CFLTFL
Trigger: GAGAAATGTTAGAAAGCAGCAGCAATTATAAGGCAA...AAAGGTTCCAGTAGATGAGACGATTGAGTCTGAATACAATTGCAGTAAATTGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR GCA 90 bp AAATCGAATCCCTATGACAAAGTAGGTTATAATGTGATCCTACTGTCCCTGATTATGAGCAAGTCAATGTaGTTTATAAGTGTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: KSNPYDKVGYNVILLSLIMSKSM*FISVVC
Trigger: ACACACAACACTTATAAAGCACATTGACTTGCTCAT...AATCAGGGACAGTAGGATCACATTATAACCTACTTTGTCATAGGGATTCGATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CCA 90 bp CACAATTTACTGCAATTGTATTCAGACTCAATCGTCTCATCTACTGGAACCTTTTGCATGACAATATATTaGAGGTTGGGGGTTAATTTT +
Preference number: 4 (lower is better)
Translates to: HNLLQLYSDSIVSSTGTFCMTIY*RLGVNF
Trigger: AAAATTAACCCCCAACCTCCAATATATTGTCATGCA...AAAGGTTCCAGTAGATGAGACGATTGAGTCTGAATACAATTGCAGTAAATTGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CCA 90 bp AATTTTTGTGGTTATTCTAGGCCTACCCTGATTGTCTGTTTACATGAATGTGCAGTGGCCATTTTACTATaGACAAATAAATATGGGAGA +
Preference number: 4 (lower is better)
Translates to: NFCGYSRPTLIVCLHECAVAILL*TNKYGR
Trigger: TCTCCCATATTTATTTGTCCATAGTAAAATGGCCAC...TGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357749.7
3UTR CAA 72 bp ACAGTACAATATCTTTATTGGCACAATTTACTGCAATaGTATTCAGACTCAATCGTCTCATCTACTGGAACC +
Preference number: 4 (lower is better)
Translates to: TVQYLYWHNLLQ*YSDSIVSSTGT
Trigger: GGTTCCAGTAGATGAGACGATTGAGTCTGAATACAATTGCAGTAAATTGTGCCAATAAAGATATTGTACTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CAA 90 bp AAGAAAGAAGAACTCTCACACACTGTTGGTAGGAATGCAAATCAGTACAGCCATTCGGTGTGTCCGGAATaGGTGGGTTCTTGGTCTCAC +
Preference number: 5 (lower is better)
Translates to: KKEELSHTVGRNANQYSHSVCPE*VGSWSH
Trigger: GTGAGACCAAGAACCCACCAATTCCGGACACACCGA...ATGGCTGTACTGATTTGCATTCCTACCAACAGTGTGTGAGAGTTCTTCTTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
CDS-3UTR CAA 90 bp AGGGGCAAGGCCAATATCCGGTACATTAATAAGTATGTATTAGACATTGAGTGCTCACTGCAGCTTAGTTaGCTGCCTATGTACAGCCCC +
Preference number: 5 (lower is better)
Translates to: RGKANIRYINKYVLDIECSLQLS*LPMYSP
Trigger: GGGGCTGTACATAGGCAGCAAACTAAGCTGCAGTGA...GCACTCAATGTCTAATACATACTTATTAATGTACCGGATATTGGCCTTGCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CAA 90 bp CAAAGGCTACCAAGGCTGACAATCCAGGTAACTATGGCAGTGACAGAAGTCAATAGGGACCAGCTGCAGTaGAAGTATGTAAGAACTATG +
Preference number: 5 (lower is better)
Translates to: QRLPRLTIQVTMAVTEVNRDQLQ*KYVRTM
Trigger: CATAGTTCTTACATACTTCAACTGCAGCTGGTCCCT...ATTGACTTCTGTCACTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS GCA 90 bp TCAGAGCTTGGCCATTTGAGAAAATTTAAATATAGGCAACATCACTaGAGCTTAGTTTGCTGCCTATGTACAGCCCCGAATCAACATGCA +
Preference number: 5 (lower is better)
Translates to: SELGHLRKFKYRQHH*SLVCCLCTAPNQHA
Trigger: TGCATGTTGATTCGGGGCTGTACATAGGCAGCAAACTAAGCTGCAGTGATGTTGCCTATATTTAAATTTTCTCAAATGGCCAAGCTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467744.2
CDS-3UTR CAA 90 bp CACAATTTACTGCAATTGTATTCAGACTCAATCGTCTCATCTACTGGAACCTTTAGAGTATCCGCCATCTaGACGGGAAACGTGTCATGT +
Preference number: 5 (lower is better)
Translates to: HNLLQLYSDSIVSSTGTFRVSAI*TGNVSC
Trigger: ACATGACACGTTTCCCGTCAAGATGGCGGATACTCT...AAAGGTTCCAGTAGATGAGACGATTGAGTCTGAATACAATTGCAGTAAATTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CAA 90 bp CAAAGGCTACCAAGGCTGACAATCCAGGTAACTATGGCAGTGACAGAAGTCAATAGTTGGGTATCCAGTTaGGTGTATATCCATTATTCA +
Preference number: 5 (lower is better)
Translates to: QRLPRLTIQVTMAVTEVNSWVSS*VYIHYS
Trigger: TGAATAATGGATATACACCAAACTGGATACCCAACT...ATTGACTTCTGTCACTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CAA 90 bp AAATCGAATCCCTATGACAAAGTAGGTTATAATGTGATCCTACTGTCCCTGATTTGGAGTCCTTGGTGGTaGCAGGTTTACCTACCAGAA +
Preference number: 5 (lower is better)
Translates to: KSNPYDKVGYNVILLSLIWSPWW*QVYLPE
Trigger: TTCTGGTAGGTAAACCTGCAACCACCAAGGACTCCA...AATCAGGGACAGTAGGATCACATTATAACCTACTTTGTCATAGGGATTCGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS CCA 90 bp TCCTTCTATCAAGTAGACTCTGAGACCAGTCAGAATTTCCAAAGTTaGGTATCCAGTTTGGTGTATATCCATTATTCAGAGGACTCCTCT +
Preference number: 5 (lower is better)
Translates to: SFYQVDSETSQNFQS*VSSLVYIHYSEDSS
Trigger: AGAGGAGTCCTCTGAATAATGGATATACACCAAACTGGATACCCAACTTTGGAAATTCTGACTGGTCTCAGAGTCTACTTGATAGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CAA 90 bp AAGAAAGAAGAACTCTCACACACTGTTGGTAGGAATGCAAATCAGTACAGCCATCTCCATAGTAGCTTCTaGAATCAACATGCAGAACTC +
Preference number: 5 (lower is better)
Translates to: KKEELSHTVGRNANQYSHLHSSF*NQHAEL
Trigger: GAGTTCTGCATGTTGATTCAAGAAGCTACTATGGAG...ATGGCTGTACTGATTTGCATTCCTACCAACAGTGTGTGAGAGTTCTTCTTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
CDS-3UTR CAA 90 bp AAATCGAATCCCTATGACAAAGTAGGTTATAATGTGATCCTACTGTCCCTGATTCAGCTTCTGTGGAGTTaGCAGATGTCACAAGAGCAT +
Preference number: 5 (lower is better)
Translates to: KSNPYDKVGYNVILLSLIQLLWS*QMSQEH
Trigger: ATGCTCTTGTGACATCTGCAAACTCCACAGAAGCTG...AATCAGGGACAGTAGGATCACATTATAACCTACTTTGTCATAGGGATTCGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CAA 90 bp AAATCGAATCCCTATGACAAAGTAGGTTATAATGTGATCCTACTGTCCCTGATTAACAAAAATGGAGTGTaGCCATACCGCCCAAGACAG +
Preference number: 5 (lower is better)
Translates to: KSNPYDKVGYNVILLSLINKNGV*PYRPRQ
Trigger: CTGTCTTGGGCGGTATGGCAACACTCCATTTTTGTT...AATCAGGGACAGTAGGATCACATTATAACCTACTTTGTCATAGGGATTCGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CAA 90 bp AATTTTTGTGGTTATTCTAGGCCTACCCTGATTGTCTGTTTACATGAATGTGCAAGGTTTGTGCTTTCCTaGAAAGTCTCCGAGTTAGCC +
Preference number: 5 (lower is better)
Translates to: NFCGYSRPTLIVCLHECARFVLS*KVSELA
Trigger: GGCTAACTCGGAGACTTTCAAGGAAAGCACAAACCT...TGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CAA 90 bp CATGGTAAGAAAGAAGAACTCTCACACACTGTTGGTAGGAATGCAAATCAGTACAACTCTCACACACTGTaGGTAGGAATGCAAATCAGT +
Preference number: 5 (lower is better)
Translates to: HGKKEELSHTVGRNANQYNSHTL*VGMQIS
Trigger: ACTGATTTGCATTCCTACCAACAGTGTGTGAGAGTT...GTACTGATTTGCATTCCTACCAACAGTGTGTGAGAGTTCTTCTTTCTTACCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615443.1
CDS-3UTR CAA 90 bp AATTTTTGTGGTTATTCTAGGCCTACCCTGATTGTCTGTTTACATGAATGTGCAATCGCTGCTTGGAGTTaGTTCTGTGAGCATTTCACA +
Preference number: 5 (lower is better)
Translates to: NFCGYSRPTLIVCLHECAIAAWS*FCEHFT
Trigger: TGTGAAATGCTCACAGAACAAACTCCAAGCAGCGAT...TGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CAA 90 bp CACAATTTACTGCAATTGTATTCAGACTCAATCGTCTCATCTACTGGAACCTTTGGACAGAAATCTTCATaGGGGCAGATTTCCTGGAAA +
Preference number: 5 (lower is better)
Translates to: HNLLQLYSDSIVSSTGTFGQKSS*GQISWK
Trigger: TTTCCAGGAAATCTGCCCCAATGAAGATTTCTGTCC...AAAGGTTCCAGTAGATGAGACGATTGAGTCTGAATACAATTGCAGTAAATTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CAA 90 bp CACAATTTACTGCAATTGTATTCAGACTCAATCGTCTCATCTACTGGAACCTTTACTGTCATACACAATTaGGAGTCCTTGGTGGTTGCA +
Preference number: 5 (lower is better)
Translates to: HNLLQLYSDSIVSSTGTFTVIHN*ESLVVA
Trigger: TGCAACCACCAAGGACTCCAAATTGTGTATGACAGT...AAAGGTTCCAGTAGATGAGACGATTGAGTCTGAATACAATTGCAGTAAATTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CAA 90 bp AAATCGAATCCCTATGACAAAGTAGGTTATAATGTGATCCTACTGTCCCTGATTACTATGTACTTTACATaGGAGCCATGGCTTCCTGAC +
Preference number: 5 (lower is better)
Translates to: KSNPYDKVGYNVILLSLITMYFT*EPWLPD
Trigger: GTCAGGAAGCCATGGCTCCAATGTAAAGTACATAGT...AATCAGGGACAGTAGGATCACATTATAACCTACTTTGTCATAGGGATTCGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CAA 90 bp AATTTTTGTGGTTATTCTAGGCCTACCCTGATTGTCTGTTTACATGAATGTGCATTCCATTACTCTGGCTaGAACTATATCTGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: NFCGYSRPTLIVCLHECAFHYSG*NYICSG
Trigger: CCCACTGCAGATATAGTTCAAGCCAGAGTAATGGAA...TGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CAA 90 bp GATTCTTCCCATAGCTTCCTAACACTGGGAGTTAGGCACTTTAATTTCTCATTAAAATACTTAATTCACTaGGTGGAACGGTTGGTTCCC +
Preference number: 5 (lower is better)
Translates to: DSSHSFLTLGVRHFNFSLKYLIH*VERLVP
Trigger: GGGAACCAACCGTTCCACCAAGTGAATTAAGTATTT...TAATGAGAAATTAAAGTGCCTAACTCCCAGTGTTAGGAAGCTATGGGAAGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615443.1
CDS-3UTR CAA 90 bp AAATCGAATCCCTATGACAAAGTAGGTTATAATGTGATCCTACTGTCCCTGATTCTCCATAGTAGCTTCTaGAATCAACATGCAGAACTC +
Preference number: 5 (lower is better)
Translates to: KSNPYDKVGYNVILLSLILHSSF*NQHAEL
Trigger: GAGTTCTGCATGTTGATTCAAGAAGCTACTATGGAG...AATCAGGGACAGTAGGATCACATTATAACCTACTTTGTCATAGGGATTCGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CAA 90 bp AAATCGAATCCCTATGACAAAGTAGGTTATAATGTGATCCTACTGTCCCTGATTAAGTTTTTGGTAGCTTaGAGACCATCTATGGTGCTG +
Preference number: 5 (lower is better)
Translates to: KSNPYDKVGYNVILLSLIKFLVA*RPSMVL
Trigger: CAGCACCATAGATGGTCTCAAAGCTACCAAAAACTT...AATCAGGGACAGTAGGATCACATTATAACCTACTTTGTCATAGGGATTCGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CAA 90 bp AATTTTTGTGGTTATTCTAGGCCTACCCTGATTGTCTGTTTACATGAATGTGCATCCTGCGTGAGACTTTaGAGATTCATCAAGTCAATG +
Preference number: 5 (lower is better)
Translates to: NFCGYSRPTLIVCLHECASCVRL*RFIKSM
Trigger: CATTGACTTGATGAATCTCAAAAGTCTCACGCAGGA...TGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CAA 90 bp AATTTTTGTGGTTATTCTAGGCCTACCCTGATTGTCTGTTTACATGAATGTGCACCTACTGTCCCTGATTaGTGTGACATTATAAAAGGG +
Preference number: 5 (lower is better)
Translates to: NFCGYSRPTLIVCLHECAPTVPD*CDIIKG
Trigger: CCCTTTTATAATGTCACACAAATCAGGGACAGTAGG...TGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CAA 90 bp CATGGTAAGAAAGAAGAACTCTCACACACTGTTGGTAGGAATGCAAATCAGTACGAGCACTATTCACAATaGCGAAAATATGGAATCAAC +
Preference number: 5 (lower is better)
Translates to: HGKKEELSHTVGRNANQYEHYSQ*RKYGIN
Trigger: GTTGATTCCATATTTTCGCAATTGTGAATAGTGCTC...GTACTGATTTGCATTCCTACCAACAGTGTGTGAGAGTTCTTCTTTCTTACCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615443.1
CDS-3UTR CAA 90 bp AATTTTTGTGGTTATTCTAGGCCTACCCTGATTGTCTGTTTACATGAATGTGCATCAGAATTTCCAAAGTaGGGTATCCAGTTTGGTGTA +
Preference number: 5 (lower is better)
Translates to: NFCGYSRPTLIVCLHECASEFPK*GIQFGV
Trigger: TACACCAAACTGGATACCCAACTTTGGAAATTCTGA...TGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CAA 90 bp AATTTTTGTGGTTATTCTAGGCCTACCCTGATTGTCTGTTTACATGAATGTGCACAAGAGCTATATTCCTaGGTTCTTTCCATTTCCCAT +
Preference number: 5 (lower is better)
Translates to: NFCGYSRPTLIVCLHECAQELYS*VLSISH
Trigger: ATGGGAAATGGAAAGAACCAAGGAATATAGCTCTTG...TGCACATTCATGTAAACAGACAATCAGGGTAGGCCTAGAATAACCACAAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS-3UTR CAA 90 bp CACAATTTACTGCAATTGTATTCAGACTCAATCGTCTCATCTACTGGAACCTTTTGGGAGATAGGGAACTaGTTACTCCATTTTCCTATA +
Preference number: 5 (lower is better)
Translates to: HNLLQLYSDSIVSSTGTFWEIGN*LLHFPI
Trigger: TATAGGAAAATGGAGTAACAAGTTCCCTATCTCCCA...AAAGGTTCCAGTAGATGAGACGATTGAGTCTGAATACAATTGCAGTAAATTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS CAA 72 bp GAGGACTCCTCTAGGTTTCCAAGGTTTGTGCTTTCCTaGAAAGTCTCCGAGTTAGCCTCTGGTATGGCACTG +
Preference number: 6 (lower is better)
Translates to: EDSSRFPRFVLS*KVSELASGMAL
Trigger: CAGTGCCATACCAGAGGCTAACTCGGAGACTTTCAAGGAAAGCACAAACCTTGGAAACCTAGAGGAGTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS CAA 90 bp CATTATTCAGAGGACTCCTCTAGGTTTCCAAGGTTTGTGCTTTCCTaGAAAGTCTCCGAGTTAGCCTCTGGTATGGCACTGGATTCTGAA +
Preference number: 6 (lower is better)
Translates to: HYSEDSSRFPRFVLS*KVSELASGMALDSE
Trigger: TTCAGAATCCAGTGCCATACCAGAGGCTAACTCGGAGACTTTCAAGGAAAGCACAAACCTTGGAAACCTAGAGGAGTCCTCTGAATAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS CCA 72 bp GGCTTCTTCATTTTCAAGGATCTGGTCTTGCCACACTaGACTGTCACTTACAATGTCACTGTTTTCCTGGTA +
Preference number: 6 (lower is better)
Translates to: GFFIFKDLVLPH*TVTYNVTVFLV
Trigger: TACCAGGAAAACAGTGACATTGTAAGTGACAGTCCAGTGTGGCAAGACCAGATCCTTGAAAATGAAGAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357749.7
ENST00000487515.1
ENST00000615443.1
CDS CAA 90 bp GTAGACTCTGAGACCAGTCAGAATTTCCAAAGTTGGGTATCCAGTTaGGTGTATATCCATTATTCAGAGGACTCCTCTAGGTTTCCAAGG +
Preference number: 6 (lower is better)
Translates to: VDSETSQNFQSWVSS*VYIHYSEDSSRFPR
Trigger: CCTTGGAAACCTAGAGGAGTCCTCTGAATAATGGATATACACCAAACTGGATACCCAACTTTGGAAATTCTGACTGGTCTCAGAGTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS GCA 72 bp TTTAAATATAGGCAACATCACTGCAGCTTAGTTTGCTaGCTATGTACAGCCCCGAATCAACATGCAGAACTC +
Preference number: 6 (lower is better)
Translates to: FKYRQHHCSLVC*LCTAPNQHAEL
Trigger: GAGTTCTGCATGTTGATTCGGGGCTGTACATAGGCAGCAAACTAAGCTGCAGTGATGTTGCCTATATTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467744.2
CDS CAA 72 bp GAGACCAGTCAGAATTTCCAAAGTTGGGTATCCAGTTaGGTGTATATCCATTATTCAGAGGACTCCTCTAGG +
Preference number: 6 (lower is better)
Translates to: ETSQNFQSWVSS*VYIHYSEDSSR
Trigger: CCTAGAGGAGTCCTCTGAATAATGGATATACACCAAACTGGATACCCAACTTTGGAAATTCTGACTGGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS CCA 72 bp AGACCAGTCAGAATTTCCAAAGTTGGGTATCCAGTTTaGTGTATATCCATTATTCAGAGGACTCCTCTAGGT +
Preference number: 6 (lower is better)
Translates to: RPVRISKVGYPV*CISIIQRTPLG
Trigger: ACCTAGAGGAGTCCTCTGAATAATGGATATACACCAAACTGGATACCCAACTTTGGAAATTCTGACTGGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7
CDS GCA 72 bp AAATTTAAATATAGGCAACATCACTGCAGCTTAGTTTaGTGCCTATGTACAGCCCCGAATCAACATGCAGAA +
Preference number: 6 (lower is better)
Translates to: KFKYRQHHCSLV*CLCTAPNQHAE
Trigger: TTCTGCATGTTGATTCGGGGCTGTACATAGGCAGCAAACTAAGCTGCAGTGATGTTGCCTATATTTAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467744.2
CDS CCA 72 bp CAAGTAGACTCTGAGACCAGTCAGAATTTCCAAAGTTaGGTATCCAGTTTGGTGTATATCCATTATTCAGAG +
Preference number: 6 (lower is better)
Translates to: QVDSETSQNFQS*VSSLVYIHYSE
Trigger: CTCTGAATAATGGATATACACCAAACTGGATACCCAACTTTGGAAATTCTGACTGGTCTCAGAGTCTACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357749.7